PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 306 327 1.1E-51 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 363 386 1.1E-51 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 423 443 1.1E-51 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 31 54 1.1E-51 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 408 423 1.1E-51 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 73 93 1.1E-51 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 339 363 1.1E-51 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 Pfam PF13437 HlyD family secretion protein 294 403 1.5E-10 T 13-09-2016 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PANTHER PTHR30386:SF3 153 444 1.7E-101 T 13-09-2016 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PANTHER PTHR30386:SF3 23 116 1.7E-101 T 13-09-2016 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 SUPERFAMILY SSF111369 61 140 1.11E-5 T 13-09-2016 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 Pfam PF13533 Biotin-lipoyl like 64 105 2.8E-5 T 13-09-2016 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 22 444 2.3E-99 T 13-09-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PANTHER PTHR30386 153 444 1.7E-101 T 13-09-2016 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 PANTHER PTHR30386 23 116 1.7E-101 T 13-09-2016 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 Gene3D G3DSA:2.40.50.100 291 326 4.3E-12 T 13-09-2016 PMA3_RS09885 162f81fb458bcd25bd345de0373a05ed 444 Gene3D G3DSA:2.40.50.100 63 95 4.3E-12 T 13-09-2016 PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 PANTHER PTHR11203 1 105 8.2E-114 T 13-09-2016 PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 Pfam PF10996 Beta-Casp domain 247 366 9.1E-25 T 13-09-2016 IPR022712 Beta-Casp domain PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 SMART SM01027 247 366 8.1E-49 T 13-09-2016 IPR022712 Beta-Casp domain PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 380 443 3.2E-16 T 13-09-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 Pfam PF00753 Metallo-beta-lactamase superfamily 16 194 5.5E-13 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 PANTHER PTHR11203 122 451 8.2E-114 T 13-09-2016 PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 Gene3D G3DSA:3.60.15.10 135 260 1.6E-46 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 Gene3D G3DSA:3.60.15.10 1 100 1.6E-46 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 PANTHER PTHR11203:SF11 122 451 8.2E-114 T 13-09-2016 PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 PANTHER PTHR11203:SF11 1 105 8.2E-114 T 13-09-2016 PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 SUPERFAMILY SSF56281 1 452 1.4E-129 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS12455 1eeb39253b9211e3bf13ebfa1f39abe1 462 SMART SM00849 13 217 1.2E-10 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 SUPERFAMILY SSF69255 386 476 1.05E-25 T 13-09-2016 PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 PANTHER PTHR32305 30 779 8.6E-154 T 13-09-2016 PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 16 523 6.2E-74 T 13-09-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 PANTHER PTHR32305:SF7 30 779 8.6E-154 T 13-09-2016 PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 618 764 9.6E-51 T 13-09-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 522 6.0E-123 T 13-09-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 Pfam PF05954 Phage late control gene D protein (GPD) 33 358 8.0E-58 T 13-09-2016 PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 SUPERFAMILY SSF69279 15 196 5.38E-45 T 13-09-2016 PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 SUPERFAMILY SSF69279 206 387 5.1E-43 T 13-09-2016 PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 Gene3D G3DSA:4.10.180.10 302 317 4.4E-5 T 13-09-2016 IPR027440 Capsid protein alpha-like domain PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 Gene3D G3DSA:2.40.50.230 394 475 8.5E-25 T 13-09-2016 IPR006531 Gp5 N-terminal PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 Gene3D G3DSA:3.55.50.10 114 208 2.1E-28 T 13-09-2016 PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 496 599 7.0E-37 T 13-09-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 SUPERFAMILY SSF69349 466 563 7.53E-5 T 13-09-2016 PMA3_RS17060 ec2697efc52f67d7a069a0e73d034d24 792 SUPERFAMILY SSF69349 707 757 7.53E-5 T 13-09-2016 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.7E-7 T 13-09-2016 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 180 195 5.3E-6 T 13-09-2016 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 5.3E-6 T 13-09-2016 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 Gene3D G3DSA:3.30.70.20 497 540 6.9E-4 T 13-09-2016 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 SUPERFAMILY SSF54862 454 554 3.53E-28 T 13-09-2016 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 450 551 5.2E-50 T 13-09-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 Gene3D G3DSA:3.50.50.60 117 223 4.5E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 Gene3D G3DSA:3.50.50.60 8 50 4.5E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 Gene3D G3DSA:3.50.50.60 312 450 4.5E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 PANTHER PTHR10617 2 477 1.4E-248 T 13-09-2016 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 SUPERFAMILY SSF51905 311 452 1.9E-58 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 SUPERFAMILY SSF51905 5 212 1.9E-58 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 SUPERFAMILY SSF54373 212 310 8.24E-34 T 13-09-2016 PMA3_RS06780 e895cce85bcf8a992adf3246349e0559 554 PANTHER PTHR10617:SF107 2 477 1.4E-248 T 13-09-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 PMA3_RS18755 57f2ef05c8b873633eecb7dd1c3fa825 257 SUPERFAMILY SSF54637 151 235 1.93E-13 T 13-09-2016 IPR029069 HotDog domain PMA3_RS18755 57f2ef05c8b873633eecb7dd1c3fa825 257 SUPERFAMILY SSF54637 9 132 4.83E-15 T 13-09-2016 IPR029069 HotDog domain PMA3_RS18755 57f2ef05c8b873633eecb7dd1c3fa825 257 Gene3D G3DSA:3.10.129.10 150 255 1.3E-16 T 13-09-2016 IPR029069 HotDog domain PMA3_RS18755 57f2ef05c8b873633eecb7dd1c3fa825 257 Pfam PF13452 N-terminal half of MaoC dehydratase 41 123 1.3E-9 T 13-09-2016 PMA3_RS18755 57f2ef05c8b873633eecb7dd1c3fa825 257 Gene3D G3DSA:3.10.129.10 1 131 6.5E-11 T 13-09-2016 IPR029069 HotDog domain PMA3_RS18755 57f2ef05c8b873633eecb7dd1c3fa825 257 Pfam PF01575 MaoC like domain 152 226 7.2E-10 T 13-09-2016 IPR002539 MaoC-like domain PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 Pfam PF01293 Phosphoenolpyruvate carboxykinase 7 466 1.5E-185 T 13-09-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 237 252 - T 13-09-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 513 1.2E-178 T 13-09-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 Gene3D G3DSA:3.90.228.20 322 512 1.1E-104 T 13-09-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 Gene3D G3DSA:3.90.228.20 200 262 1.1E-104 T 13-09-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 SUPERFAMILY SSF68923 5 198 1.74E-67 T 13-09-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 SUPERFAMILY SSF53795 200 513 1.28E-124 T 13-09-2016 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 PANTHER PTHR30031 6 513 8.3E-265 T 13-09-2016 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 1 513 51.23 T 13-09-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 Gene3D G3DSA:3.40.449.10 8 197 2.6E-65 T 13-09-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 PANTHER PTHR30031:SF0 6 513 8.3E-265 T 13-09-2016 PMA3_RS00830 0a9835bd0d286bd283098e4d428a8476 513 PIRSF PIRSF006294 1 513 2.0E-203 T 13-09-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 Gene3D G3DSA:3.30.160.40 221 305 2.6E-26 T 13-09-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 4.5E-112 T 13-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 Gene3D G3DSA:3.40.190.10 2 110 1.3E-48 T 13-09-2016 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 13-09-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 Gene3D G3DSA:3.40.190.10 111 199 3.5E-40 T 13-09-2016 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 6.6E-51 T 13-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 6.6E-51 T 13-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 6.6E-51 T 13-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 6.6E-51 T 13-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 6.6E-51 T 13-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 SUPERFAMILY SSF53850 4 219 4.89E-85 T 13-09-2016 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 SUPERFAMILY SSF54782 220 309 3.4E-27 T 13-09-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 296 4.1E-20 T 13-09-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 PANTHER PTHR11557 4 307 4.9E-162 T 13-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 PIRSF PIRSF001438 1 311 8.7E-120 T 13-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 1.2E-78 T 13-09-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29235 a6d043d670f3662ece92e621c86ce7b9 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.12 T 13-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 SUPERFAMILY SSF51735 5 228 6.83E-62 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 PANTHER PTHR24322:SF343 150 182 3.4E-31 T 13-09-2016 PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 Gene3D G3DSA:3.40.50.720 4 228 5.2E-49 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 PANTHER PTHR24322:SF343 9 130 3.4E-31 T 13-09-2016 PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 Pfam PF00106 short chain dehydrogenase 5 189 1.2E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 PANTHER PTHR24322 9 130 3.4E-31 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 PANTHER PTHR24322 150 182 3.4E-31 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.1E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.1E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.1E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.1E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS25955 76b7edf77e02b62f8313a71da72f90b0 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.1E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.2E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.2E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.2E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 PANTHER PTHR30346 1 298 6.0E-85 T 13-09-2016 PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 Gene3D G3DSA:1.10.10.10 1 88 1.5E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 SUPERFAMILY SSF53850 92 296 2.44E-38 T 13-09-2016 PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 PANTHER PTHR30346:SF7 1 298 6.0E-85 T 13-09-2016 PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 Gene3D G3DSA:3.40.190.10 176 261 9.3E-23 T 13-09-2016 PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 SUPERFAMILY SSF46785 3 86 9.62E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.6E-22 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 Pfam PF03466 LysR substrate binding domain 89 293 7.3E-39 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS16980 1a713d535df846547ccaafae6c351c9c 300 Gene3D G3DSA:3.40.190.10 89 175 1.1E-31 T 13-09-2016 PMA3_RS03225 5d55040b5356455576fd5563a4dc20b9 150 Gene3D G3DSA:3.10.50.40 134 148 4.5E-25 T 13-09-2016 PMA3_RS03225 5d55040b5356455576fd5563a4dc20b9 150 Gene3D G3DSA:3.10.50.40 8 88 4.5E-25 T 13-09-2016 PMA3_RS03225 5d55040b5356455576fd5563a4dc20b9 150 PANTHER PTHR10516:SF329 1 96 1.3E-20 T 13-09-2016 PMA3_RS03225 5d55040b5356455576fd5563a4dc20b9 150 PANTHER PTHR10516:SF329 137 147 1.3E-20 T 13-09-2016 PMA3_RS03225 5d55040b5356455576fd5563a4dc20b9 150 PANTHER PTHR10516 1 96 1.3E-20 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS03225 5d55040b5356455576fd5563a4dc20b9 150 PANTHER PTHR10516 137 147 1.3E-20 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS03225 5d55040b5356455576fd5563a4dc20b9 150 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 11 145 2.2E-21 T 13-09-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PMA3_RS03225 5d55040b5356455576fd5563a4dc20b9 150 SUPERFAMILY SSF54534 11 148 1.73E-40 T 13-09-2016 PMA3_RS13345 37ce08520d463d5cf0d29f0119b7a6ba 290 PANTHER PTHR41251:SF1 2 260 4.3E-94 T 13-09-2016 PMA3_RS13345 37ce08520d463d5cf0d29f0119b7a6ba 290 Gene3D G3DSA:2.40.290.10 4 158 1.2E-9 T 13-09-2016 IPR016194 SPOC-like, C-terminal domain PMA3_RS13345 37ce08520d463d5cf0d29f0119b7a6ba 290 PIRSF PIRSF006493 1 290 2.7E-94 T 13-09-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type PMA3_RS13345 37ce08520d463d5cf0d29f0119b7a6ba 290 SUPERFAMILY SSF100939 2 265 1.61E-51 T 13-09-2016 IPR016194 SPOC-like, C-terminal domain PMA3_RS13345 37ce08520d463d5cf0d29f0119b7a6ba 290 SMART SM00559 53 181 1.1E-38 T 13-09-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 PMA3_RS13345 37ce08520d463d5cf0d29f0119b7a6ba 290 PANTHER PTHR41251 2 260 4.3E-94 T 13-09-2016 PMA3_RS13345 37ce08520d463d5cf0d29f0119b7a6ba 290 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 262 1.1E-96 T 13-09-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type PMA3_RS13345 37ce08520d463d5cf0d29f0119b7a6ba 290 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 192 2.3E-35 T 13-09-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 PMA3_RS13345 37ce08520d463d5cf0d29f0119b7a6ba 290 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 261 30.478 T 13-09-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type PMA3_RS26350 05185a679e5709434c6c4240c571aa52 437 Pfam PF01266 FAD dependent oxidoreductase 39 392 4.1E-54 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS26350 05185a679e5709434c6c4240c571aa52 437 PANTHER PTHR13847 1 434 6.3E-256 T 13-09-2016 PMA3_RS26350 05185a679e5709434c6c4240c571aa52 437 Gene3D G3DSA:3.50.50.60 185 264 2.7E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS26350 05185a679e5709434c6c4240c571aa52 437 Gene3D G3DSA:3.50.50.60 24 131 2.7E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS26350 05185a679e5709434c6c4240c571aa52 437 Gene3D G3DSA:3.50.50.60 356 401 2.7E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS26350 05185a679e5709434c6c4240c571aa52 437 SUPERFAMILY SSF51905 38 265 4.21E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS26350 05185a679e5709434c6c4240c571aa52 437 SUPERFAMILY SSF51905 356 406 4.21E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS26350 05185a679e5709434c6c4240c571aa52 437 PANTHER PTHR13847:SF215 1 434 6.3E-256 T 13-09-2016 PMA3_RS26350 05185a679e5709434c6c4240c571aa52 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 61 1.1E-5 T 13-09-2016 PMA3_RS26350 05185a679e5709434c6c4240c571aa52 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 380 395 1.1E-5 T 13-09-2016 PMA3_RS28665 81c5dc72e6b674ce4e1973a2f0cc913e 489 Pfam PF05488 PAAR motif 8 78 8.2E-10 T 13-09-2016 IPR008727 PAAR motif PMA3_RS02925 6856bdd60d9a869b3f729e79e80c40cc 296 Pfam PF04228 Putative neutral zinc metallopeptidase 1 291 1.6E-124 T 13-09-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PMA3_RS02925 6856bdd60d9a869b3f729e79e80c40cc 296 PANTHER PTHR30168 2 296 7.0E-137 T 13-09-2016 PMA3_RS03890 09b93252687e2089e3f4e8d14c53437f 388 PANTHER PTHR30068 344 384 5.4E-182 T 13-09-2016 PMA3_RS03890 09b93252687e2089e3f4e8d14c53437f 388 SUPERFAMILY SSF69593 89 160 1.96E-6 T 13-09-2016 PMA3_RS03890 09b93252687e2089e3f4e8d14c53437f 388 PANTHER PTHR30068:SF3 344 384 5.4E-182 T 13-09-2016 PMA3_RS03890 09b93252687e2089e3f4e8d14c53437f 388 PANTHER PTHR30068:SF3 1 327 5.4E-182 T 13-09-2016 PMA3_RS03890 09b93252687e2089e3f4e8d14c53437f 388 Gene3D G3DSA:3.40.1130.10 94 216 8.9E-4 T 13-09-2016 PMA3_RS03890 09b93252687e2089e3f4e8d14c53437f 388 PANTHER PTHR30068 1 327 5.4E-182 T 13-09-2016 PMA3_RS03890 09b93252687e2089e3f4e8d14c53437f 388 Pfam PF01553 Acyltransferase 89 196 2.8E-9 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 13-09-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 13-09-2016 IPR028299 ClpA/B, conserved site 2 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 SMART SM01086 764 853 1.2E-35 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 SMART SM00382 597 753 6.7E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 SMART SM00382 198 343 1.5E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 Gene3D G3DSA:1.10.1780.10 1 147 5.3E-41 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.8E-11 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.4E-10 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 PANTHER PTHR11638 1 853 0.0 T 13-09-2016 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 Gene3D G3DSA:3.40.50.300 550 774 5.2E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 13-09-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 SUPERFAMILY SSF52540 546 853 1.4E-81 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 9.7E-14 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 842 1.3E-24 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 SUPERFAMILY SSF81923 4 156 1.05E-38 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 Gene3D G3DSA:3.40.50.300 160 342 2.9E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 2.1E-42 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 2.1E-42 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 2.1E-42 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 2.1E-42 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 SUPERFAMILY SSF52540 159 545 5.74E-100 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 Gene3D G3DSA:1.10.8.60 775 853 5.9E-29 T 13-09-2016 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 758 6.2E-55 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 Gene3D G3DSA:1.10.8.60 344 428 1.3E-36 T 13-09-2016 PMA3_RS03305 0aaaf16783a6096fc1c82a6713441512 854 PANTHER PTHR11638:SF18 1 853 0.0 T 13-09-2016 PMA3_RS02055 a1f859e2c14124fed058a4d4ccd34b54 323 Gene3D G3DSA:3.40.50.300 4 174 3.0E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02055 a1f859e2c14124fed058a4d4ccd34b54 323 PANTHER PTHR11088 5 302 3.3E-114 T 13-09-2016 PMA3_RS02055 a1f859e2c14124fed058a4d4ccd34b54 323 Pfam PF01715 IPP transferase 41 297 2.2E-86 T 13-09-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PMA3_RS02055 a1f859e2c14124fed058a4d4ccd34b54 323 SUPERFAMILY SSF52540 8 152 1.37E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02055 a1f859e2c14124fed058a4d4ccd34b54 323 Gene3D G3DSA:1.10.287.890 213 295 2.2E-33 T 13-09-2016 PMA3_RS02055 a1f859e2c14124fed058a4d4ccd34b54 323 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 305 1.7E-103 T 13-09-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PMA3_RS02055 a1f859e2c14124fed058a4d4ccd34b54 323 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 314 30.064 T 13-09-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PMA3_RS01105 6b74c4b4c9c2a390e1b530d659d57c84 438 Pfam PF06101 Plant protein of unknown function (DUF946) 18 209 6.2E-25 T 13-09-2016 IPR009291 Vacuolar protein sorting-associated protein 62 PMA3_RS01105 6b74c4b4c9c2a390e1b530d659d57c84 438 PANTHER PTHR17204 42 156 3.2E-16 T 13-09-2016 PMA3_RS01105 6b74c4b4c9c2a390e1b530d659d57c84 438 PANTHER PTHR17204:SF29 42 156 3.2E-16 T 13-09-2016 PMA3_RS18580 48254c969cb5b53f68b5234e4a5e7c84 522 Gene3D G3DSA:3.30.43.10 6 115 6.7E-35 T 13-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PMA3_RS18580 48254c969cb5b53f68b5234e4a5e7c84 522 SUPERFAMILY SSF56176 11 243 2.62E-60 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS18580 48254c969cb5b53f68b5234e4a5e7c84 522 Gene3D G3DSA:1.10.45.10 477 520 8.2E-20 T 13-09-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PMA3_RS18580 48254c969cb5b53f68b5234e4a5e7c84 522 Gene3D G3DSA:3.40.462.10 246 476 5.8E-89 T 13-09-2016 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain KEGG: 00908+1.5.99.12 PMA3_RS18580 48254c969cb5b53f68b5234e4a5e7c84 522 PANTHER PTHR11748:SF92 10 513 4.5E-73 T 13-09-2016 PMA3_RS18580 48254c969cb5b53f68b5234e4a5e7c84 522 Pfam PF02913 FAD linked oxidases, C-terminal domain 326 513 7.1E-11 T 13-09-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PMA3_RS18580 48254c969cb5b53f68b5234e4a5e7c84 522 Gene3D G3DSA:3.30.465.10 116 243 2.3E-37 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS18580 48254c969cb5b53f68b5234e4a5e7c84 522 PANTHER PTHR11748 10 513 4.5E-73 T 13-09-2016 PMA3_RS18580 48254c969cb5b53f68b5234e4a5e7c84 522 Pfam PF01565 FAD binding domain 59 199 3.0E-28 T 13-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PMA3_RS18580 48254c969cb5b53f68b5234e4a5e7c84 522 SUPERFAMILY SSF55103 246 516 3.92E-50 T 13-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PMA3_RS21555 ccad54a59f6cd250430d44e9e0ffe3d2 161 SMART SM00260 13 150 8.4E-52 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS21555 ccad54a59f6cd250430d44e9e0ffe3d2 161 Gene3D G3DSA:2.30.30.40 92 143 1.5E-7 T 13-09-2016 PMA3_RS21555 ccad54a59f6cd250430d44e9e0ffe3d2 161 PANTHER PTHR22617 11 161 1.4E-108 T 13-09-2016 PMA3_RS21555 ccad54a59f6cd250430d44e9e0ffe3d2 161 Gene3D G3DSA:2.40.50.180 56 91 1.3E-10 T 13-09-2016 PMA3_RS21555 ccad54a59f6cd250430d44e9e0ffe3d2 161 SUPERFAMILY SSF50341 13 156 1.06E-40 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS21555 ccad54a59f6cd250430d44e9e0ffe3d2 161 Pfam PF01584 CheW-like domain 17 153 5.8E-38 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS21555 ccad54a59f6cd250430d44e9e0ffe3d2 161 PANTHER PTHR22617:SF26 11 161 1.4E-108 T 13-09-2016 PMA3_RS18060 3a813b1c5a49096e9210d635c3cffd08 358 SUPERFAMILY SSF63829 33 347 9.59E-24 T 13-09-2016 PMA3_RS18060 3a813b1c5a49096e9210d635c3cffd08 358 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 120 278 5.3E-11 T 13-09-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region PMA3_RS18060 3a813b1c5a49096e9210d635c3cffd08 358 Gene3D G3DSA:2.120.10.30 41 348 3.2E-30 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS28870 e2f05c66e1d63c806cc45569b9d52d72 306 SUPERFAMILY SSF161098 19 301 7.29E-55 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28870 e2f05c66e1d63c806cc45569b9d52d72 306 PANTHER PTHR30193 20 306 1.0E-134 T 13-09-2016 PMA3_RS28870 e2f05c66e1d63c806cc45569b9d52d72 306 PANTHER PTHR30193:SF5 20 306 1.0E-134 T 13-09-2016 PMA3_RS28870 e2f05c66e1d63c806cc45569b9d52d72 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 21 292 8.2E-14 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28870 e2f05c66e1d63c806cc45569b9d52d72 306 Gene3D G3DSA:1.10.3720.10 18 296 1.3E-53 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29315 3cfcb213646eff5340dbd90a2c224646 141 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 1.8E-39 T 13-09-2016 IPR001602 Uncharacterised protein family UPF0047 PMA3_RS29315 3cfcb213646eff5340dbd90a2c224646 141 PIRSF PIRSF004681 1 139 1.6E-41 T 13-09-2016 IPR001602 Uncharacterised protein family UPF0047 PMA3_RS29315 3cfcb213646eff5340dbd90a2c224646 141 PANTHER PTHR30615 1 141 7.1E-69 T 13-09-2016 PMA3_RS29315 3cfcb213646eff5340dbd90a2c224646 141 SUPERFAMILY SSF111038 1 139 2.49E-43 T 13-09-2016 IPR001602 Uncharacterised protein family UPF0047 PMA3_RS29315 3cfcb213646eff5340dbd90a2c224646 141 Gene3D G3DSA:2.60.120.460 1 139 1.1E-49 T 13-09-2016 IPR001602 Uncharacterised protein family UPF0047 PMA3_RS29315 3cfcb213646eff5340dbd90a2c224646 141 Pfam PF01894 Uncharacterised protein family UPF0047 28 135 2.2E-33 T 13-09-2016 IPR001602 Uncharacterised protein family UPF0047 PMA3_RS01785 6b66d55ea000715641d47cfd74567adb 353 PANTHER PTHR30160:SF8 1 349 3.2E-158 T 13-09-2016 PMA3_RS01785 6b66d55ea000715641d47cfd74567adb 353 Gene3D G3DSA:3.40.50.2000 2 156 1.1E-31 T 13-09-2016 PMA3_RS01785 6b66d55ea000715641d47cfd74567adb 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 313 2.2E-73 T 13-09-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PMA3_RS01785 6b66d55ea000715641d47cfd74567adb 353 Gene3D G3DSA:3.40.50.2000 171 347 4.7E-48 T 13-09-2016 PMA3_RS01785 6b66d55ea000715641d47cfd74567adb 353 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 295 1.4E-112 T 13-09-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 PMA3_RS01785 6b66d55ea000715641d47cfd74567adb 353 SUPERFAMILY SSF53756 2 347 4.08E-78 T 13-09-2016 PMA3_RS01785 6b66d55ea000715641d47cfd74567adb 353 PANTHER PTHR30160 1 349 3.2E-158 T 13-09-2016 PMA3_RS00825 b98c65fa2803cc08d8c10de2d6e1074e 300 Gene3D G3DSA:3.90.1280.10 230 288 1.7E-22 T 13-09-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PMA3_RS00825 b98c65fa2803cc08d8c10de2d6e1074e 300 Gene3D G3DSA:1.10.287.480 183 229 2.8E-18 T 13-09-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain PMA3_RS00825 b98c65fa2803cc08d8c10de2d6e1074e 300 Gene3D G3DSA:3.55.30.10 5 176 6.7E-60 T 13-09-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PMA3_RS00825 b98c65fa2803cc08d8c10de2d6e1074e 300 SUPERFAMILY SSF118352 230 288 2.75E-17 T 13-09-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PMA3_RS00825 b98c65fa2803cc08d8c10de2d6e1074e 300 Hamap MF_00117 33 kDa chaperonin [hslO]. 7 290 30.619 T 13-09-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PMA3_RS00825 b98c65fa2803cc08d8c10de2d6e1074e 300 Pfam PF01430 Hsp33 protein 8 279 1.5E-80 T 13-09-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PMA3_RS00825 b98c65fa2803cc08d8c10de2d6e1074e 300 PANTHER PTHR30111 8 294 1.2E-66 T 13-09-2016 PMA3_RS00825 b98c65fa2803cc08d8c10de2d6e1074e 300 PANTHER PTHR30111:SF1 8 294 1.2E-66 T 13-09-2016 PMA3_RS00825 b98c65fa2803cc08d8c10de2d6e1074e 300 SUPERFAMILY SSF64397 8 237 1.96E-69 T 13-09-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PMA3_RS00825 b98c65fa2803cc08d8c10de2d6e1074e 300 PIRSF PIRSF005261 1 290 6.1E-74 T 13-09-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 SUPERFAMILY SSF48557 15 461 1.57E-124 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 13-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 Gene3D G3DSA:1.20.200.10 126 187 1.6E-78 T 13-09-2016 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 Gene3D G3DSA:1.20.200.10 232 379 1.6E-78 T 13-09-2016 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 Gene3D G3DSA:1.10.40.30 380 435 1.4E-23 T 13-09-2016 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 Pfam PF00206 Lyase 30 305 2.6E-57 T 13-09-2016 IPR022761 Fumarate lyase, N-terminal PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PANTHER PTHR11444:SF3 1 460 2.8E-178 T 13-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PRINTS PR00149 Fumarate lyase superfamily signature 152 170 2.3E-22 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PRINTS PR00149 Fumarate lyase superfamily signature 107 125 2.3E-22 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PRINTS PR00149 Fumarate lyase superfamily signature 236 263 2.3E-22 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 2.3E-22 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 Hamap MF_00006 Argininosuccinate lyase [argH]. 7 458 38.151 T 13-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 Pfam PF14698 Argininosuccinate lyase C-terminal 368 436 8.8E-20 T 13-09-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PANTHER PTHR11444 1 460 2.8E-178 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PRINTS PR00145 Argininosuccinate lyase family signature 236 260 5.4E-51 T 13-09-2016 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PRINTS PR00145 Argininosuccinate lyase family signature 280 296 5.4E-51 T 13-09-2016 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PRINTS PR00145 Argininosuccinate lyase family signature 315 334 5.4E-51 T 13-09-2016 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PRINTS PR00145 Argininosuccinate lyase family signature 106 128 5.4E-51 T 13-09-2016 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PRINTS PR00145 Argininosuccinate lyase family signature 198 214 5.4E-51 T 13-09-2016 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 PRINTS PR00145 Argininosuccinate lyase family signature 147 167 5.4E-51 T 13-09-2016 PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 Gene3D G3DSA:1.10.275.10 197 231 9.6E-43 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 Gene3D G3DSA:1.10.275.10 33 125 9.6E-43 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS14790 71b80337a6b8b53fd2150f59c6379d3c 475 TIGRFAM TIGR00838 argH: argininosuccinate lyase 8 460 5.8E-160 T 13-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS30130 ddc412562e4116cfa5e38b8059b45bb5 177 Gene3D G3DSA:3.40.50.1000 2 172 3.5E-50 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS30130 ddc412562e4116cfa5e38b8059b45bb5 177 SUPERFAMILY SSF56784 2 174 4.35E-42 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS30130 ddc412562e4116cfa5e38b8059b45bb5 177 PANTHER PTHR23133:SF7 2 174 9.0E-96 T 13-09-2016 PMA3_RS30130 ddc412562e4116cfa5e38b8059b45bb5 177 PANTHER PTHR23133 2 174 9.0E-96 T 13-09-2016 PMA3_RS30130 ddc412562e4116cfa5e38b8059b45bb5 177 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 2 144 1.3E-41 T 13-09-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 PMA3_RS30130 ddc412562e4116cfa5e38b8059b45bb5 177 PIRSF PIRSF004682 1 173 2.8E-52 T 13-09-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 PMA3_RS30130 ddc412562e4116cfa5e38b8059b45bb5 177 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 146 1.4E-34 T 13-09-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA PMA3_RS30130 ddc412562e4116cfa5e38b8059b45bb5 177 Pfam PF13242 HAD-hyrolase-like 99 168 2.7E-10 T 13-09-2016 PMA3_RS24675 9a0331aa9c5602c8a43293ce0bcd1fc0 682 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 391 562 5.2E-38 T 13-09-2016 IPR022045 Insecticide toxin TcdB middle/N-terminal PMA3_RS24675 9a0331aa9c5602c8a43293ce0bcd1fc0 682 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 3 45 2.1E-12 T 13-09-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 PMA3_RS24675 9a0331aa9c5602c8a43293ce0bcd1fc0 682 SUPERFAMILY SSF69318 115 256 1.83E-11 T 13-09-2016 PMA3_RS24675 9a0331aa9c5602c8a43293ce0bcd1fc0 682 SUPERFAMILY SSF69318 318 374 1.83E-11 T 13-09-2016 PMA3_RS24675 9a0331aa9c5602c8a43293ce0bcd1fc0 682 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 611 674 4.9E-17 T 13-09-2016 IPR022044 Insecticide toxin TcdB middle/C-terminal PMA3_RS28905 1d48d0c38a25676e0cae8b51476c7a9d 458 PANTHER PTHR20852:SF7 12 458 1.2E-148 T 13-09-2016 PMA3_RS28905 1d48d0c38a25676e0cae8b51476c7a9d 458 Pfam PF00120 Glutamine synthetase, catalytic domain 121 454 3.3E-109 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS28905 1d48d0c38a25676e0cae8b51476c7a9d 458 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 13-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS28905 1d48d0c38a25676e0cae8b51476c7a9d 458 Gene3D G3DSA:3.10.20.70 11 123 9.9E-18 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS28905 1d48d0c38a25676e0cae8b51476c7a9d 458 SMART SM01230 120 376 6.5E-94 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS28905 1d48d0c38a25676e0cae8b51476c7a9d 458 SUPERFAMILY SSF54368 11 119 2.88E-16 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS28905 1d48d0c38a25676e0cae8b51476c7a9d 458 SUPERFAMILY SSF55931 122 456 8.93E-103 T 13-09-2016 PMA3_RS28905 1d48d0c38a25676e0cae8b51476c7a9d 458 Gene3D G3DSA:3.30.590.10 124 444 1.2E-95 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS28905 1d48d0c38a25676e0cae8b51476c7a9d 458 PANTHER PTHR20852 12 458 1.2E-148 T 13-09-2016 PMA3_RS25245 89b92a0b41e11c9bfe3c5df6e1ed71cb 517 SMART SM00858 19 89 3.6E-10 T 13-09-2016 IPR013974 SAF domain PMA3_RS25245 89b92a0b41e11c9bfe3c5df6e1ed71cb 517 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 12 517 1.1E-291 T 13-09-2016 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497|UniPathway: UPA00565 PMA3_RS25245 89b92a0b41e11c9bfe3c5df6e1ed71cb 517 PANTHER PTHR30536 1 517 0.0 T 13-09-2016 PMA3_RS25245 89b92a0b41e11c9bfe3c5df6e1ed71cb 517 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 116 514 8.9E-148 T 13-09-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 PMA3_RS25245 89b92a0b41e11c9bfe3c5df6e1ed71cb 517 PANTHER PTHR30536:SF1 1 517 0.0 T 13-09-2016 PMA3_RS25245 89b92a0b41e11c9bfe3c5df6e1ed71cb 517 Pfam PF08666 SAF domain 19 89 6.6E-10 T 13-09-2016 IPR013974 SAF domain PMA3_RS08560 2dd79f4428cc4c79e99aeae5177d3d61 83 SUPERFAMILY SSF64307 4 80 4.58E-24 T 13-09-2016 IPR001455 TusA-like domain PMA3_RS08560 2dd79f4428cc4c79e99aeae5177d3d61 83 Gene3D G3DSA:3.30.110.40 6 81 3.1E-27 T 13-09-2016 IPR001455 TusA-like domain PMA3_RS08560 2dd79f4428cc4c79e99aeae5177d3d61 83 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 13 37 - T 13-09-2016 IPR001455 TusA-like domain PMA3_RS08560 2dd79f4428cc4c79e99aeae5177d3d61 83 Pfam PF01206 Sulfurtransferase TusA 12 80 1.5E-21 T 13-09-2016 IPR001455 TusA-like domain PMA3_RS08560 2dd79f4428cc4c79e99aeae5177d3d61 83 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 4 82 25.106 T 13-09-2016 IPR022931 Sulphurtransferase TusA GO:0016783 PMA3_RS08560 2dd79f4428cc4c79e99aeae5177d3d61 83 PANTHER PTHR33279 4 80 6.1E-37 T 13-09-2016 PMA3_RS08560 2dd79f4428cc4c79e99aeae5177d3d61 83 PANTHER PTHR33279:SF5 4 80 6.1E-37 T 13-09-2016 PMA3_RS03110 99fb8ce705d8cda9d8db95078998abdd 164 PANTHER PTHR30437 1 162 2.0E-23 T 13-09-2016 PMA3_RS03110 99fb8ce705d8cda9d8db95078998abdd 164 PIRSF PIRSF006092 3 164 4.4E-38 T 13-09-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PMA3_RS03110 99fb8ce705d8cda9d8db95078998abdd 164 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 90 162 4.0E-22 T 13-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PMA3_RS03110 99fb8ce705d8cda9d8db95078998abdd 164 Gene3D G3DSA:3.10.50.30 87 163 7.0E-25 T 13-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PMA3_RS03110 99fb8ce705d8cda9d8db95078998abdd 164 PANTHER PTHR30437:SF6 1 162 2.0E-23 T 13-09-2016 PMA3_RS03110 99fb8ce705d8cda9d8db95078998abdd 164 SUPERFAMILY SSF54534 89 162 7.32E-20 T 13-09-2016 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 SUPERFAMILY SSF47384 408 501 6.28E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 Gene3D G3DSA:3.30.565.10 488 666 2.8E-40 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 664 7.9E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PANTHER PTHR24423 229 248 7.6E-147 T 13-09-2016 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PANTHER PTHR24423 465 663 7.6E-147 T 13-09-2016 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 SUPERFAMILY SSF55874 493 666 1.83E-37 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PANTHER PTHR24423 285 440 7.6E-147 T 13-09-2016 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 SMART SM00388 412 502 1.0E-6 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PANTHER PTHR24423:SF450 229 248 7.6E-147 T 13-09-2016 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 Pfam PF00672 HAMP domain 166 234 3.8E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 SMART SM00091 287 355 4.8E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 662 6.7E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 621 6.7E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 6.7E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 642 6.7E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 Gene3D G3DSA:1.10.287.130 414 487 2.9E-6 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PANTHER PTHR24423:SF450 465 663 7.6E-147 T 13-09-2016 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PANTHER PTHR24423:SF450 285 440 7.6E-147 T 13-09-2016 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 403 8.6E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 Pfam PF00989 PAS fold 289 394 7.0E-10 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 SUPERFAMILY SSF158472 185 234 3.66E-7 T 13-09-2016 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PANTHER PTHR24423:SF450 94 161 7.6E-147 T 13-09-2016 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 Pfam PF00512 His Kinase A (phospho-acceptor) domain 414 500 9.8E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 PANTHER PTHR24423 94 161 7.6E-147 T 13-09-2016 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 SUPERFAMILY SSF55785 275 395 2.09E-14 T 13-09-2016 IPR000014 PAS domain PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 SMART SM00387 550 665 3.7E-26 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 SMART SM00304 185 238 1.2E-8 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS23330 f3abd444c49cdd38e0c0a945943720e4 678 Gene3D G3DSA:3.30.450.20 286 395 4.3E-16 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 PANTHER PTHR11615:SF123 1 288 0.0 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 PANTHER PTHR11615:SF123 646 833 0.0 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 PANTHER PTHR11615 1 288 0.0 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 PANTHER PTHR11615 646 833 0.0 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 SUPERFAMILY SSF50692 690 829 4.52E-40 T 13-09-2016 IPR009010 Aspartate decarboxylase-like domain PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 PANTHER PTHR11615:SF123 348 599 0.0 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 829 0.0 T 13-09-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 94 1.2E-14 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 PANTHER PTHR11615 348 599 0.0 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Gene3D G3DSA:3.40.50.740 624 667 1.8E-76 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Gene3D G3DSA:3.40.50.740 401 578 1.8E-76 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Gene3D G3DSA:3.40.50.740 98 180 1.8E-76 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 SMART SM00926 41 95 8.1E-10 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Pfam PF00384 Molybdopterin oxidoreductase 98 571 8.4E-90 T 13-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Gene3D G3DSA:3.40.228.10 328 400 2.5E-54 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Gene3D G3DSA:3.40.228.10 181 293 2.5E-54 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 26 4.8E-4 T 13-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Pfam PF01568 Molydopterin dinucleotide binding domain 717 825 1.9E-24 T 13-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Gene3D G3DSA:2.40.40.20 707 829 6.9E-44 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Gene3D G3DSA:2.20.25.90 40 95 1.9E-16 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 64 - T 13-09-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 SUPERFAMILY SSF53706 37 662 5.63E-198 T 13-09-2016 PMA3_RS12830 c0b9b311780a7c81e264af4eaf279f33 834 Hamap MF_01630 Nitrate reductase [napA]. 1 831 29.025 T 13-09-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 PMA3_RS20555 86028c225ee013281c359f267df7f714 248 Gene3D G3DSA:3.40.50.720 4 246 3.8E-82 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20555 86028c225ee013281c359f267df7f714 248 SUPERFAMILY SSF51735 8 246 2.61E-81 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20555 86028c225ee013281c359f267df7f714 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 188 2.0E-4 T 13-09-2016 PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PANTHER PTHR24322 13 140 1.0E-66 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PANTHER PTHR24322 157 189 1.0E-66 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 5.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 5.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.9E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.9E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 8.9E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PANTHER PTHR24322:SF343 157 189 1.0E-66 T 13-09-2016 PMA3_RS20555 86028c225ee013281c359f267df7f714 248 PANTHER PTHR24322:SF343 13 140 1.0E-66 T 13-09-2016 PMA3_RS20555 86028c225ee013281c359f267df7f714 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 246 1.9E-62 T 13-09-2016 PMA3_RS18590 95883c889ae7c7f7f0c7da49e2c4019c 227 Gene3D G3DSA:2.60.120.200 1 221 1.7E-57 T 13-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PMA3_RS18590 95883c889ae7c7f7f0c7da49e2c4019c 227 SUPERFAMILY SSF49899 2 221 1.58E-66 T 13-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PMA3_RS18590 95883c889ae7c7f7f0c7da49e2c4019c 227 Pfam PF08787 Alginate lyase 2 220 1.8E-53 T 13-09-2016 IPR014895 Alginate lyase 2 PMA3_RS14810 9236b629bd34e779911e4a7577d05156 282 PANTHER PTHR10587 48 164 2.8E-25 T 13-09-2016 PMA3_RS14810 9236b629bd34e779911e4a7577d05156 282 Gene3D G3DSA:3.20.20.370 3 279 2.5E-69 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS14810 9236b629bd34e779911e4a7577d05156 282 SUPERFAMILY SSF88713 3 280 3.11E-61 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS14810 9236b629bd34e779911e4a7577d05156 282 Pfam PF01522 Polysaccharide deacetylase 50 156 5.8E-19 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS01325 2f37af27caf824bc86631152fc346b48 856 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 70 749 52.471 T 13-09-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 PMA3_RS01325 2f37af27caf824bc86631152fc346b48 856 PANTHER PTHR10587:SF63 471 749 4.7E-146 T 13-09-2016 PMA3_RS01325 2f37af27caf824bc86631152fc346b48 856 PANTHER PTHR10587:SF63 153 422 4.7E-146 T 13-09-2016 PMA3_RS01325 2f37af27caf824bc86631152fc346b48 856 Gene3D G3DSA:3.90.550.10 266 393 3.3E-4 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS01325 2f37af27caf824bc86631152fc346b48 856 PANTHER PTHR10587 471 749 4.7E-146 T 13-09-2016 PMA3_RS01325 2f37af27caf824bc86631152fc346b48 856 PANTHER PTHR10587 153 422 4.7E-146 T 13-09-2016 PMA3_RS01325 2f37af27caf824bc86631152fc346b48 856 SUPERFAMILY SSF53448 248 534 7.22E-28 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS01325 2f37af27caf824bc86631152fc346b48 856 Pfam PF00535 Glycosyl transferase family 2 250 432 1.1E-22 T 13-09-2016 IPR001173 Glycosyltransferase 2-like PMA3_RS25515 c78e519e55db4995e55db1cb38b21e9e 127 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 6.6E-40 T 13-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PMA3_RS25515 c78e519e55db4995e55db1cb38b21e9e 127 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 6.6E-40 T 13-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PMA3_RS25515 c78e519e55db4995e55db1cb38b21e9e 127 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 6.6E-40 T 13-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PMA3_RS25515 c78e519e55db4995e55db1cb38b21e9e 127 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 6.6E-40 T 13-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PMA3_RS25515 c78e519e55db4995e55db1cb38b21e9e 127 PANTHER PTHR34182 3 123 1.7E-27 T 13-09-2016 PMA3_RS25515 c78e519e55db4995e55db1cb38b21e9e 127 Pfam PF03840 Preprotein translocase SecG subunit 5 73 1.8E-18 T 13-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PMA3_RS25515 c78e519e55db4995e55db1cb38b21e9e 127 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 74 4.4E-23 T 13-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 Gene3D G3DSA:1.10.8.60 311 379 9.7E-20 T 13-09-2016 PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 SMART SM00382 158 302 2.9E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 Pfam PF00158 Sigma-54 interaction domain 139 304 5.7E-72 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 Gene3D G3DSA:3.40.50.300 135 310 7.8E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 PANTHER PTHR32071 1 440 7.8E-217 T 13-09-2016 PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 SUPERFAMILY SSF52540 138 379 6.44E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 SUPERFAMILY SSF46689 351 440 5.63E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 Gene3D G3DSA:1.10.10.60 391 440 1.5E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 Pfam PF02954 Bacterial regulatory protein, Fis family 401 434 9.1E-7 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS13225 ac21cafcefaa1c2668be9c72181a4c8b 441 PANTHER PTHR32071:SF34 1 440 7.8E-217 T 13-09-2016 PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 373 855 6.4E-74 T 13-09-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 Pfam PF03797 Autotransporter beta-domain 583 835 1.3E-47 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 SMART SM00869 581 842 1.4E-39 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 Gene3D G3DSA:2.40.128.130 536 855 2.1E-67 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 PRINTS PR01484 Pertactin virulence factor family signature 808 833 9.9E-9 T 13-09-2016 IPR003991 Pertactin virulence factor family GO:0007155 PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 PRINTS PR01484 Pertactin virulence factor family signature 769 790 9.9E-9 T 13-09-2016 IPR003991 Pertactin virulence factor family GO:0007155 PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 PRINTS PR01484 Pertactin virulence factor family signature 723 740 9.9E-9 T 13-09-2016 IPR003991 Pertactin virulence factor family GO:0007155 PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 PRINTS PR01484 Pertactin virulence factor family signature 626 650 9.9E-9 T 13-09-2016 IPR003991 Pertactin virulence factor family GO:0007155 PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 SUPERFAMILY SSF103515 551 855 1.44E-43 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 Gene3D G3DSA:2.160.20.20 59 499 2.9E-32 T 13-09-2016 IPR012332 P22 tailspike C-terminal domain-like PMA3_RS14950 9e3830c15d32ab54ab2487b419328e1e 855 SUPERFAMILY SSF51126 40 489 4.08E-32 T 13-09-2016 IPR011050 Pectin lyase fold/virulence factor PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 SMART SM00244 21 185 1.2E-36 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 PANTHER PTHR10264:SF80 6 287 1.6E-100 T 13-09-2016 PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 Pfam PF01145 SPFH domain / Band 7 family 25 200 2.6E-29 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 PRINTS PR00721 Stomatin signature 115 132 9.9E-8 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 PRINTS PR00721 Stomatin signature 161 179 9.9E-8 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 PRINTS PR00721 Stomatin signature 180 201 9.9E-8 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 PRINTS PR00721 Stomatin signature 28 50 9.9E-8 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 PIRSF PIRSF005651 1 289 1.1E-94 T 13-09-2016 IPR010200 HflC GO:0016021|GO:0052547 PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 SUPERFAMILY SSF117892 53 192 1.2E-28 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 TIGRFAM TIGR01932 hflC: HflC protein 154 284 7.1E-47 T 13-09-2016 IPR010200 HflC GO:0016021|GO:0052547 PMA3_RS02075 87052c8354ca8e713f3ebe562c235779 289 PANTHER PTHR10264 6 287 1.6E-100 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS25520 468c8d6aa09262a3b3b2fcbac7a461c3 251 Gene3D G3DSA:3.20.20.70 1 249 5.1E-97 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS25520 468c8d6aa09262a3b3b2fcbac7a461c3 251 SUPERFAMILY SSF51351 1 248 4.84E-88 T 13-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PMA3_RS25520 468c8d6aa09262a3b3b2fcbac7a461c3 251 PANTHER PTHR21139 1 249 8.9E-122 T 13-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PMA3_RS25520 468c8d6aa09262a3b3b2fcbac7a461c3 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 39.67 T 13-09-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PMA3_RS25520 468c8d6aa09262a3b3b2fcbac7a461c3 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 3.0E-62 T 13-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PMA3_RS25520 468c8d6aa09262a3b3b2fcbac7a461c3 251 Pfam PF00121 Triosephosphate isomerase 5 246 4.3E-86 T 13-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PMA3_RS25520 468c8d6aa09262a3b3b2fcbac7a461c3 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 13-09-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.0E-23 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 SUPERFAMILY SSF46785 2 84 2.46E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 Pfam PF03466 LysR substrate binding domain 88 294 5.2E-39 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 Gene3D G3DSA:3.40.190.10 180 263 2.2E-24 T 13-09-2016 PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 Gene3D G3DSA:3.40.190.10 89 179 1.4E-22 T 13-09-2016 PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 PANTHER PTHR30346:SF0 1 294 3.2E-84 T 13-09-2016 PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 Gene3D G3DSA:1.10.10.10 3 81 1.1E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 SUPERFAMILY SSF53850 91 294 1.86E-34 T 13-09-2016 PMA3_RS10785 39dd2f7943c6e21afe5258abffb5726e 299 PANTHER PTHR30346 1 294 3.2E-84 T 13-09-2016 PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 Gene3D G3DSA:3.40.50.300 2 282 1.7E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 SUPERFAMILY SSF52540 99 283 1.38E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 SUPERFAMILY SSF52540 3 66 1.38E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 PANTHER PTHR24220:SF358 102 289 9.0E-113 T 13-09-2016 PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 262 283 2.5E-10 T 13-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 PANTHER PTHR24220 7 75 9.0E-113 T 13-09-2016 PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 SMART SM00382 30 260 6.0E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 Pfam PF00005 ABC transporter 21 211 3.5E-26 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 PANTHER PTHR24220:SF358 7 75 9.0E-113 T 13-09-2016 PMA3_RS02245 21599c190abf84b6412c31d849ca2b3a 290 PANTHER PTHR24220 102 289 9.0E-113 T 13-09-2016 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 SMART SM01008 29 140 1.0E-41 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 PANTHER PTHR11908:SF76 1 470 6.4E-293 T 13-09-2016 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 PANTHER PTHR11908:SF76 486 596 6.4E-293 T 13-09-2016 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Gene3D G3DSA:3.30.365.10 371 463 4.9E-56 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Gene3D G3DSA:3.30.365.10 658 802 4.9E-56 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 835 973 2.6E-28 T 13-09-2016 IPR010419 Carbon monoxide dehydrogenase subunit G PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Gene3D G3DSA:3.30.365.10 464 643 1.9E-34 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Gene3D G3DSA:3.30.365.10 184 291 1.0E-23 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 SUPERFAMILY SSF55961 831 974 3.4E-36 T 13-09-2016 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 30 140 8.2E-26 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 SUPERFAMILY SSF56003 132 802 2.09E-163 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Gene3D G3DSA:3.30.530.20 831 977 7.2E-47 T 13-09-2016 IPR023393 START-like domain PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 PANTHER PTHR11908:SF76 621 809 6.4E-293 T 13-09-2016 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 156 742 9.8E-146 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 PANTHER PTHR11908 1 470 6.4E-293 T 13-09-2016 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 PANTHER PTHR11908 486 596 6.4E-293 T 13-09-2016 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 SUPERFAMILY SSF54665 10 161 2.09E-41 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Gene3D G3DSA:3.90.1170.50 7 128 1.5E-38 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Gene3D G3DSA:3.30.365.10 129 183 2.1E-34 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 Gene3D G3DSA:3.30.365.10 294 369 2.1E-34 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS09780 f695770ed69cfa56ee7ff9efdf087080 999 PANTHER PTHR11908 621 809 6.4E-293 T 13-09-2016 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 SUPERFAMILY SSF55781 19 161 2.7E-19 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 Gene3D G3DSA:1.10.287.130 166 234 2.6E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 SUPERFAMILY SSF55874 250 390 5.63E-28 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 Pfam PF00512 His Kinase A (phospho-acceptor) domain 174 235 1.6E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 Gene3D G3DSA:3.30.450.40 20 162 2.1E-16 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 SMART SM00387 283 392 2.3E-24 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 PANTHER PTHR24423 72 127 3.0E-49 T 13-09-2016 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 PANTHER PTHR24423 152 392 3.0E-49 T 13-09-2016 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 370 1.0E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 389 1.0E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 347 1.0E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 SMART SM00388 173 238 1.2E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 391 9.8E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 Gene3D G3DSA:3.30.565.10 250 391 1.2E-29 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 SMART SM00065 13 161 6.3E-9 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 SUPERFAMILY SSF47384 162 236 1.79E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05495 14b9a9f594f02de7aaf768a7c14fa7b4 392 Pfam PF01590 GAF domain 19 151 1.2E-9 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 SUPERFAMILY SSF46785 6 73 7.39E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 PANTHER PTHR33516:SF2 3 204 5.0E-79 T 13-09-2016 PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 SUPERFAMILY SSF51306 83 203 4.88E-34 T 13-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 Hamap MF_00015 LexA repressor [lexA]. 6 205 29.821 T 13-09-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 PANTHER PTHR33516 3 204 5.0E-79 T 13-09-2016 PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 129 140 2.5E-11 T 13-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 157 169 2.5E-11 T 13-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 118 128 2.5E-11 T 13-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 Gene3D G3DSA:1.10.10.10 4 71 9.5E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 Pfam PF01726 LexA DNA binding domain 4 68 1.8E-15 T 13-09-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 TIGRFAM TIGR00498 lexA: repressor LexA 4 204 1.2E-54 T 13-09-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 Gene3D G3DSA:2.10.109.10 83 204 9.2E-41 T 13-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PMA3_RS12055 a7ba1809a6851d456240b5db40869adc 205 Pfam PF00717 Peptidase S24-like 121 186 2.6E-17 T 13-09-2016 IPR019759 Peptidase S24/S26A/S26B PMA3_RS21675 8b10682bcbaabeb3ffcd4ba4092cfecc 151 SUPERFAMILY SSF101801 68 149 2.22E-25 T 13-09-2016 IPR001543 Surface presentation of antigen (SpoA) PMA3_RS21675 8b10682bcbaabeb3ffcd4ba4092cfecc 151 PANTHER PTHR22617 4 150 3.3E-31 T 13-09-2016 PMA3_RS21675 8b10682bcbaabeb3ffcd4ba4092cfecc 151 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 72 141 3.1E-24 T 13-09-2016 IPR001543 Surface presentation of antigen (SpoA) PMA3_RS21675 8b10682bcbaabeb3ffcd4ba4092cfecc 151 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 68 143 2.5E-33 T 13-09-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 PMA3_RS21675 8b10682bcbaabeb3ffcd4ba4092cfecc 151 PRINTS PR00956 Flagellar motor switch protein FliN signature 104 117 3.9E-28 T 13-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PMA3_RS21675 8b10682bcbaabeb3ffcd4ba4092cfecc 151 PRINTS PR00956 Flagellar motor switch protein FliN signature 71 87 3.9E-28 T 13-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PMA3_RS21675 8b10682bcbaabeb3ffcd4ba4092cfecc 151 PRINTS PR00956 Flagellar motor switch protein FliN signature 117 132 3.9E-28 T 13-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PMA3_RS21675 8b10682bcbaabeb3ffcd4ba4092cfecc 151 PRINTS PR00956 Flagellar motor switch protein FliN signature 88 104 3.9E-28 T 13-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PMA3_RS21675 8b10682bcbaabeb3ffcd4ba4092cfecc 151 Gene3D G3DSA:2.30.330.10 67 151 1.2E-37 T 13-09-2016 PMA3_RS22445 7d5f06fa41e0c2b7aefc726af0a039f0 419 PANTHER PTHR10108:SF795 343 405 2.1E-106 T 13-09-2016 PMA3_RS22445 7d5f06fa41e0c2b7aefc726af0a039f0 419 Pfam PF02353 Mycolic acid cyclopropane synthetase 134 404 6.4E-84 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS22445 7d5f06fa41e0c2b7aefc726af0a039f0 419 SUPERFAMILY SSF53335 22 362 2.27E-83 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS22445 7d5f06fa41e0c2b7aefc726af0a039f0 419 PANTHER PTHR10108:SF795 68 322 2.1E-106 T 13-09-2016 PMA3_RS22445 7d5f06fa41e0c2b7aefc726af0a039f0 419 PANTHER PTHR10108 343 405 2.1E-106 T 13-09-2016 PMA3_RS22445 7d5f06fa41e0c2b7aefc726af0a039f0 419 PANTHER PTHR10108 68 322 2.1E-106 T 13-09-2016 PMA3_RS22445 7d5f06fa41e0c2b7aefc726af0a039f0 419 PIRSF PIRSF003085 21 418 1.1E-128 T 13-09-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 PMA3_RS22445 7d5f06fa41e0c2b7aefc726af0a039f0 419 Gene3D G3DSA:3.40.50.150 130 405 6.8E-91 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS03175 1a85cf53f29eda9f61352a5fd2a20b62 104 PANTHER PTHR21349 3 103 8.4E-45 T 13-09-2016 PMA3_RS03175 1a85cf53f29eda9f61352a5fd2a20b62 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 3 103 4.8E-42 T 13-09-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03175 1a85cf53f29eda9f61352a5fd2a20b62 104 SUPERFAMILY SSF141091 3 103 9.68E-38 T 13-09-2016 IPR028909 Ribosomal protein L21-like GO:0005840 PMA3_RS03175 1a85cf53f29eda9f61352a5fd2a20b62 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 2 104 26.688 T 13-09-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03175 1a85cf53f29eda9f61352a5fd2a20b62 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 3 102 1.0E-38 T 13-09-2016 IPR028909 Ribosomal protein L21-like GO:0005840 PMA3_RS03175 1a85cf53f29eda9f61352a5fd2a20b62 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 13-09-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS26400 c666aaf6cf473d9588eee394cf4daf77 422 PIRSF PIRSF001434 1 401 3.4E-143 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS26400 c666aaf6cf473d9588eee394cf4daf77 422 PANTHER PTHR11808 10 402 8.3E-157 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS26400 c666aaf6cf473d9588eee394cf4daf77 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 17 397 6.7E-128 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS26400 c666aaf6cf473d9588eee394cf4daf77 422 SUPERFAMILY SSF53383 30 397 1.9E-105 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS26400 c666aaf6cf473d9588eee394cf4daf77 422 Gene3D G3DSA:3.90.1150.10 265 400 3.1E-41 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS26400 c666aaf6cf473d9588eee394cf4daf77 422 Gene3D G3DSA:3.40.640.10 15 264 3.2E-87 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS26400 c666aaf6cf473d9588eee394cf4daf77 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 208 222 - T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 Pfam PF02803 Thiolase, C-terminal domain 279 400 3.8E-47 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 13-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 Gene3D G3DSA:3.40.47.10 143 184 2.2E-58 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 Gene3D G3DSA:3.40.47.10 285 400 2.2E-58 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 8.4E-127 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 PIRSF PIRSF000429 1 401 1.1E-108 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 SUPERFAMILY SSF53901 1 274 1.37E-57 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 PANTHER PTHR18919 1 228 1.5E-238 T 13-09-2016 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 Pfam PF00108 Thiolase, N-terminal domain 6 270 1.5E-43 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 13-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 13-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 PANTHER PTHR18919:SF12 1 228 1.5E-238 T 13-09-2016 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 PANTHER PTHR18919 249 401 1.5E-238 T 13-09-2016 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 Gene3D G3DSA:3.40.47.10 4 126 4.0E-54 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 Gene3D G3DSA:3.40.47.10 185 284 4.0E-54 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 PANTHER PTHR18919:SF12 249 401 1.5E-238 T 13-09-2016 PMA3_RS20710 6e4613788252faaf2097108a564ad3b5 401 SUPERFAMILY SSF53901 279 400 4.18E-43 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 Gene3D G3DSA:3.30.450.20 89 183 1.7E-5 T 13-09-2016 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 SUPERFAMILY SSF55874 430 580 2.1E-38 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 Gene3D G3DSA:3.30.565.10 435 583 1.7E-37 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PANTHER PTHR24423:SF485 359 585 7.1E-91 T 13-09-2016 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 SMART SM00387 473 582 1.6E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PANTHER PTHR24423 177 295 7.1E-91 T 13-09-2016 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PANTHER PTHR24423:SF485 3 12 7.1E-91 T 13-09-2016 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PANTHER PTHR24423:SF485 177 295 7.1E-91 T 13-09-2016 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 SUPERFAMILY SSF103190 93 193 1.02E-14 T 13-09-2016 IPR029151 Periplasmic sensor domain-like PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PANTHER PTHR24423:SF485 322 338 7.1E-91 T 13-09-2016 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 580 1.4E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 Gene3D G3DSA:1.10.287.130 360 427 2.6E-4 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PANTHER PTHR24423 322 338 7.1E-91 T 13-09-2016 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 SMART SM00388 363 431 5.0E-5 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 3.8E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 579 3.8E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 3.8E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 561 3.8E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PIRSF PIRSF036431 1 587 7.5E-181 T 13-09-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 SUPERFAMILY SSF47384 359 429 2.55E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PANTHER PTHR24423 359 585 7.1E-91 T 13-09-2016 PMA3_RS23470 5bfe26a5abf22cbfbda7f6912b6c16d8 588 PANTHER PTHR24423 3 12 7.1E-91 T 13-09-2016 PMA3_RS07330 8a7fefe6d13522a44ddb7b0a622ebc7d 287 PANTHER PTHR24220 57 282 4.3E-54 T 13-09-2016 PMA3_RS07330 8a7fefe6d13522a44ddb7b0a622ebc7d 287 SUPERFAMILY SSF52540 52 258 1.14E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07330 8a7fefe6d13522a44ddb7b0a622ebc7d 287 PANTHER PTHR24220:SF218 57 282 4.3E-54 T 13-09-2016 PMA3_RS07330 8a7fefe6d13522a44ddb7b0a622ebc7d 287 Gene3D G3DSA:3.40.50.300 55 274 7.9E-47 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07330 8a7fefe6d13522a44ddb7b0a622ebc7d 287 SMART SM00382 80 261 5.5E-6 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS07330 8a7fefe6d13522a44ddb7b0a622ebc7d 287 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS07330 8a7fefe6d13522a44ddb7b0a622ebc7d 287 Pfam PF00005 ABC transporter 71 211 6.7E-25 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS28540 b7a2956965b14ee1643f7979f803bb39 240 Pfam PF00912 Transglycosylase 54 218 1.1E-44 T 13-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PMA3_RS28540 b7a2956965b14ee1643f7979f803bb39 240 PANTHER PTHR30400:SF0 1 227 7.8E-105 T 13-09-2016 PMA3_RS28540 b7a2956965b14ee1643f7979f803bb39 240 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 1 224 43.052 T 13-09-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 PMA3_RS28540 b7a2956965b14ee1643f7979f803bb39 240 Gene3D G3DSA:1.10.3810.10 53 222 3.7E-54 T 13-09-2016 PMA3_RS28540 b7a2956965b14ee1643f7979f803bb39 240 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 5 222 4.3E-93 T 13-09-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 PMA3_RS28540 b7a2956965b14ee1643f7979f803bb39 240 PANTHER PTHR30400 1 227 7.8E-105 T 13-09-2016 PMA3_RS28540 b7a2956965b14ee1643f7979f803bb39 240 SUPERFAMILY SSF53955 52 222 7.03E-55 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS22895 3d46a0352db0a9732d541b90e453ef6d 264 Pfam PF01553 Acyltransferase 60 180 2.0E-19 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS22895 3d46a0352db0a9732d541b90e453ef6d 264 PANTHER PTHR10434 1 191 1.3E-50 T 13-09-2016 PMA3_RS22895 3d46a0352db0a9732d541b90e453ef6d 264 PANTHER PTHR10434 208 245 1.3E-50 T 13-09-2016 PMA3_RS22895 3d46a0352db0a9732d541b90e453ef6d 264 Gene3D G3DSA:3.40.1130.10 69 182 8.0E-7 T 13-09-2016 PMA3_RS22895 3d46a0352db0a9732d541b90e453ef6d 264 SMART SM00563 72 183 7.4E-30 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS22895 3d46a0352db0a9732d541b90e453ef6d 264 PANTHER PTHR10434:SF8 1 191 1.3E-50 T 13-09-2016 PMA3_RS22895 3d46a0352db0a9732d541b90e453ef6d 264 PANTHER PTHR10434:SF8 208 245 1.3E-50 T 13-09-2016 PMA3_RS22895 3d46a0352db0a9732d541b90e453ef6d 264 SUPERFAMILY SSF69593 10 224 5.75E-28 T 13-09-2016 PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 SMART SM00382 30 225 9.9E-19 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 PANTHER PTHR24220 3 295 1.0E-156 T 13-09-2016 PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 Gene3D G3DSA:3.10.580.10 260 365 2.0E-15 T 13-09-2016 PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 Pfam PF00571 CBS domain 260 303 8.1E-7 T 13-09-2016 IPR000644 CBS domain PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 PANTHER PTHR24220:SF350 3 295 1.0E-156 T 13-09-2016 PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 SMART SM00116 260 308 8.1E-5 T 13-09-2016 IPR000644 CBS domain PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 SUPERFAMILY SSF54631 260 365 1.95E-16 T 13-09-2016 PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 Pfam PF00005 ABC transporter 22 167 7.2E-35 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 Gene3D G3DSA:3.40.50.300 1 240 1.2E-74 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 SUPERFAMILY SSF52540 1 244 8.67E-72 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS25375 13f652469378291ab5ff82e62f418932 385 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 18 365 7.4E-104 T 13-09-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PMA3_RS19535 7832c76a14b7f47a87b6ed6bde52f209 111 PIRSF PIRSF006223 4 111 1.4E-32 T 13-09-2016 IPR007453 Sulphur transfer protein DsrC/TusE PMA3_RS19535 7832c76a14b7f47a87b6ed6bde52f209 111 Gene3D G3DSA:1.10.10.370 42 111 1.4E-28 T 13-09-2016 PMA3_RS19535 7832c76a14b7f47a87b6ed6bde52f209 111 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 111 5.5E-42 T 13-09-2016 IPR007453 Sulphur transfer protein DsrC/TusE PMA3_RS19535 7832c76a14b7f47a87b6ed6bde52f209 111 PANTHER PTHR37010:SF1 1 111 2.0E-45 T 13-09-2016 PMA3_RS19535 7832c76a14b7f47a87b6ed6bde52f209 111 Pfam PF04358 DsrC like protein 6 111 3.0E-36 T 13-09-2016 IPR007453 Sulphur transfer protein DsrC/TusE PMA3_RS19535 7832c76a14b7f47a87b6ed6bde52f209 111 Gene3D G3DSA:3.30.1420.10 1 41 9.8E-13 T 13-09-2016 PMA3_RS19535 7832c76a14b7f47a87b6ed6bde52f209 111 PANTHER PTHR37010 1 111 2.0E-45 T 13-09-2016 PMA3_RS19535 7832c76a14b7f47a87b6ed6bde52f209 111 SUPERFAMILY SSF69721 1 111 1.14E-35 T 13-09-2016 IPR025526 DsrC-like domain PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 Pfam PF00122 E1-E2 ATPase 282 500 4.1E-54 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 SUPERFAMILY SSF81653 319 410 5.1E-24 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 652 3.7E-21 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 3.7E-21 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 509 523 3.7E-21 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 695 714 3.7E-21 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 730 3.7E-21 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 709 1.8E-33 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 249 797 1.4E-154 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 511 517 - T 13-09-2016 IPR018303 P-type ATPase, phosphorylation site PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 Gene3D G3DSA:3.30.70.100 92 163 4.9E-14 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 Gene3D G3DSA:2.70.150.10 276 411 3.5E-24 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 Gene3D G3DSA:3.40.50.1000 615 763 9.5E-51 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 Gene3D G3DSA:3.40.50.1000 482 525 9.5E-51 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 8 90 1.5E-27 T 13-09-2016 IPR021993 Putative metal-binding domain of cation transport ATPase PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 SUPERFAMILY SSF55008 88 165 2.36E-15 T 13-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 PANTHER PTHR24093:SF50 90 799 1.7E-170 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 PANTHER PTHR24093 90 799 1.7E-170 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 Pfam PF00403 Heavy-metal-associated domain 98 157 8.5E-6 T 13-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 277 798 3.8E-113 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 SUPERFAMILY SSF56784 507 527 4.44E-49 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 SUPERFAMILY SSF56784 559 795 4.44E-49 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 232 797 1.4E-139 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 ProSitePatterns PS01229 Hypothetical cof family signature 2. 695 717 - T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 SUPERFAMILY SSF81665 278 310 9.02E-7 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 SUPERFAMILY SSF81665 412 502 9.02E-7 T 13-09-2016 PMA3_RS07510 243da133e4be2e63b15d19bae0da224a 817 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 285 778 3.2E-68 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 SUPERFAMILY SSF53335 265 384 8.85E-35 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 SUPERFAMILY SSF53335 143 224 8.85E-35 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 Pfam PF02926 THUMP domain 44 156 4.2E-7 T 13-09-2016 IPR004114 THUMP domain GO:0003723 PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 Gene3D G3DSA:3.40.50.150 491 756 3.4E-73 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 Pfam PF01170 Putative RNA methylase family UPF0020 165 380 8.9E-42 T 13-09-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 PANTHER PTHR18895:SF62 460 728 3.5E-109 T 13-09-2016 PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 SUPERFAMILY SSF53335 454 753 4.62E-67 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 7 758 32.301 T 13-09-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 PIRSF PIRSF037618 2 758 0.0 T 13-09-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 PANTHER PTHR18895 460 728 3.5E-109 T 13-09-2016 PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 Gene3D G3DSA:3.40.50.150 262 356 2.3E-17 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 Gene3D G3DSA:3.40.50.150 151 221 2.3E-17 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 313 319 - T 13-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 533 710 7.3E-19 T 13-09-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PMA3_RS20385 5cc92b61a131a8379298e333ee2289a2 758 SMART SM00981 59 157 2.7E-21 T 13-09-2016 IPR004114 THUMP domain GO:0003723 PMA3_RS22660 f8bda8c17d3aee6eb1a86acf6d5409d5 230 PANTHER PTHR21600 1 227 8.5E-63 T 13-09-2016 PMA3_RS22660 f8bda8c17d3aee6eb1a86acf6d5409d5 230 SUPERFAMILY SSF55120 61 227 1.76E-39 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS22660 f8bda8c17d3aee6eb1a86acf6d5409d5 230 Gene3D G3DSA:3.10.290.10 1 63 4.0E-10 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS22660 f8bda8c17d3aee6eb1a86acf6d5409d5 230 SUPERFAMILY SSF55174 1 88 2.69E-10 T 13-09-2016 PMA3_RS22660 f8bda8c17d3aee6eb1a86acf6d5409d5 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 13-09-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PMA3_RS22660 f8bda8c17d3aee6eb1a86acf6d5409d5 230 Pfam PF00849 RNA pseudouridylate synthase 62 137 9.2E-13 T 13-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS22660 f8bda8c17d3aee6eb1a86acf6d5409d5 230 SMART SM00363 1 63 0.0039 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS22660 f8bda8c17d3aee6eb1a86acf6d5409d5 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 222 1.5E-38 T 13-09-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PMA3_RS22660 f8bda8c17d3aee6eb1a86acf6d5409d5 230 PANTHER PTHR21600:SF19 1 227 8.5E-63 T 13-09-2016 PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 326 9.5E-35 T 13-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 SUPERFAMILY SSF52518 369 570 6.45E-50 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 2.4E-52 T 13-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 588 0.0 T 13-09-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 PANTHER PTHR18968:SF14 1 589 0.0 T 13-09-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 PANTHER PTHR18968 1 589 0.0 T 13-09-2016 PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 Gene3D G3DSA:3.40.50.970 2 182 6.5E-61 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 Gene3D G3DSA:3.40.50.1220 186 360 2.4E-49 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 SUPERFAMILY SSF52518 3 185 1.84E-49 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 SUPERFAMILY SSF52467 186 376 3.47E-47 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 2.7E-32 T 13-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PMA3_RS14645 e19ab59cac83dd1755f5fa6ef189d0bb 591 Gene3D G3DSA:3.40.50.970 361 574 1.8E-57 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS21715 a1c9d0cb0d6f3c1f9a99d20e301a5a65 452 PANTHER PTHR15184 28 438 1.1E-229 T 13-09-2016 PMA3_RS21715 a1c9d0cb0d6f3c1f9a99d20e301a5a65 452 SMART SM00382 167 350 7.0E-5 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS21715 a1c9d0cb0d6f3c1f9a99d20e301a5a65 452 Gene3D G3DSA:3.40.50.300 130 401 6.2E-92 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21715 a1c9d0cb0d6f3c1f9a99d20e301a5a65 452 SUPERFAMILY SSF52540 103 372 1.44E-97 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21715 a1c9d0cb0d6f3c1f9a99d20e301a5a65 452 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 28 446 2.3E-174 T 13-09-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS21715 a1c9d0cb0d6f3c1f9a99d20e301a5a65 452 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 13-09-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS21715 a1c9d0cb0d6f3c1f9a99d20e301a5a65 452 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 155 366 2.8E-74 T 13-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS21715 a1c9d0cb0d6f3c1f9a99d20e301a5a65 452 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 442 7.8E-194 T 13-09-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS21715 a1c9d0cb0d6f3c1f9a99d20e301a5a65 452 PANTHER PTHR15184:SF9 28 438 1.1E-229 T 13-09-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 PANTHER PTHR33751:SF1 25 79 9.5E-115 T 13-09-2016 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 31 304 8.7E-80 T 13-09-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 PANTHER PTHR33751 25 79 9.5E-115 T 13-09-2016 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 3.9E-23 T 13-09-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 SUPERFAMILY SSF46626 218 303 2.82E-20 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 Gene3D G3DSA:1.10.760.10 221 304 9.5E-23 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 PANTHER PTHR33751:SF1 97 308 9.5E-115 T 13-09-2016 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 PIRSF PIRSF000006 1 305 1.6E-100 T 13-09-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 222 298 2.2E-10 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 131 205 1.5E-13 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 Gene3D G3DSA:1.10.760.10 60 82 1.2E-29 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 Gene3D G3DSA:1.10.760.10 126 207 1.2E-29 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 SUPERFAMILY SSF46626 55 78 1.75E-30 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 SUPERFAMILY SSF46626 111 207 1.75E-30 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 PANTHER PTHR33751 97 308 9.5E-115 T 13-09-2016 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 PRINTS PR00605 Class IC cytochrome C signature 141 152 3.6E-6 T 13-09-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PMA3_RS07550 6a6b2dc5b34853f8b9d7ed6f6fd9b226 317 PRINTS PR00605 Class IC cytochrome C signature 183 205 3.6E-6 T 13-09-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PMA3_RS15325 2462162d2322f5d3543020f6f1957fea 323 Pfam PF00149 Calcineurin-like phosphoesterase 10 145 2.7E-8 T 13-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PMA3_RS15325 2462162d2322f5d3543020f6f1957fea 323 SUPERFAMILY SSF56300 245 302 8.28E-32 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS15325 2462162d2322f5d3543020f6f1957fea 323 SUPERFAMILY SSF56300 6 173 8.28E-32 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS15325 2462162d2322f5d3543020f6f1957fea 323 PANTHER PTHR11668 1 85 7.6E-20 T 13-09-2016 PMA3_RS15325 2462162d2322f5d3543020f6f1957fea 323 PANTHER PTHR11668:SF281 1 85 7.6E-20 T 13-09-2016 PMA3_RS15325 2462162d2322f5d3543020f6f1957fea 323 Gene3D G3DSA:3.60.21.10 209 308 7.7E-39 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS15325 2462162d2322f5d3543020f6f1957fea 323 Gene3D G3DSA:3.60.21.10 3 162 7.7E-39 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS22935 69d6608ce45814ab2bc3a84bf5824214 405 PANTHER PTHR11751 18 398 3.7E-263 T 13-09-2016 PMA3_RS22935 69d6608ce45814ab2bc3a84bf5824214 405 Gene3D G3DSA:3.90.1150.10 264 395 1.6E-44 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS22935 69d6608ce45814ab2bc3a84bf5824214 405 Pfam PF00155 Aminotransferase class I and II 37 388 1.5E-58 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS22935 69d6608ce45814ab2bc3a84bf5824214 405 Gene3D G3DSA:3.40.640.10 50 263 1.3E-60 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS22935 69d6608ce45814ab2bc3a84bf5824214 405 PANTHER PTHR11751:SF302 18 398 3.7E-263 T 13-09-2016 PMA3_RS22935 69d6608ce45814ab2bc3a84bf5824214 405 SUPERFAMILY SSF53383 9 394 9.18E-106 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 Pfam PF01588 Putative tRNA binding domain 587 680 2.5E-22 T 13-09-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 535 1.3E-174 T 13-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 545 39.237 T 13-09-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 PANTHER PTHR11946:SF86 1 638 8.9E-235 T 13-09-2016 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 SUPERFAMILY SSF50249 577 682 7.1E-28 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 2.7E-24 T 13-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 2.7E-24 T 13-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 2.7E-24 T 13-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 2.7E-24 T 13-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 2.7E-24 T 13-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 2.7E-24 T 13-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 Gene3D G3DSA:3.40.50.620 182 378 5.4E-86 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 Gene3D G3DSA:3.40.50.620 5 143 5.4E-86 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 SUPERFAMILY SSF47323 389 546 1.11E-38 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 13-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 SUPERFAMILY SSF57770 141 175 2.75E-12 T 13-09-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 565 683 2.7E-41 T 13-09-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 Gene3D G3DSA:2.20.28.20 144 175 1.7E-18 T 13-09-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 Gene3D G3DSA:2.40.50.140 574 683 1.3E-38 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 SUPERFAMILY SSF52374 4 140 7.98E-100 T 13-09-2016 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 SUPERFAMILY SSF52374 175 386 7.98E-100 T 13-09-2016 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 Gene3D G3DSA:1.10.730.10 379 534 2.5E-38 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 PANTHER PTHR11946 1 638 8.9E-235 T 13-09-2016 PMA3_RS23700 6e090425c0d6fe3dc1a65f91793705db 683 Pfam PF09334 tRNA synthetases class I (M) 7 395 2.9E-157 T 13-09-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 SUPERFAMILY SSF158472 194 240 2.35E-5 T 13-09-2016 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 1.3E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 1.3E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 1.3E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 1.3E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 Gene3D G3DSA:3.30.565.10 316 462 7.6E-37 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 Gene3D G3DSA:1.10.287.130 234 305 9.1E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 462 1.3E-134 T 13-09-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 462 1.8E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 306 7.3E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 Pfam PF00672 HAMP domain 171 239 7.4E-10 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 SMART SM00304 190 243 4.3E-6 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 SUPERFAMILY SSF47384 227 308 7.06E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 PANTHER PTHR24423 184 463 2.1E-84 T 13-09-2016 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 SMART SM00388 244 310 2.8E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 PANTHER PTHR24423:SF354 184 463 2.1E-84 T 13-09-2016 PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 SUPERFAMILY SSF55874 300 463 4.32E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS06460 dfcbc99854bae245396a01ccb2e5c72c 478 SMART SM00387 353 465 6.5E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 PANTHER PTHR26402 437 455 3.2E-25 T 13-09-2016 PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 PANTHER PTHR26402 10 121 3.2E-25 T 13-09-2016 PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 106 8.6E-17 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 Gene3D G3DSA:3.40.50.300 156 261 1.9E-8 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 PANTHER PTHR26402:SF606 437 455 3.2E-25 T 13-09-2016 PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 PANTHER PTHR26402:SF606 10 121 3.2E-25 T 13-09-2016 PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 Pfam PF05729 NACHT domain 156 272 3.1E-6 T 13-09-2016 PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 Gene3D G3DSA:1.10.10.10 13 109 2.1E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 SUPERFAMILY SSF52540 128 393 4.52E-22 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 SMART SM00862 31 106 3.8E-16 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 SUPERFAMILY SSF46894 9 108 2.01E-18 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 PRINTS PR00364 Disease resistance protein signature 219 233 7.1E-8 T 13-09-2016 PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 PRINTS PR00364 Disease resistance protein signature 157 172 7.1E-8 T 13-09-2016 PMA3_RS17730 df21e790d66ad3269228bf46bd85a0f4 463 PRINTS PR00364 Disease resistance protein signature 327 341 7.1E-8 T 13-09-2016 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 334 78.566 T 13-09-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 333 1.5E-128 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PANTHER PTHR11405:SF44 1 276 9.6E-195 T 13-09-2016 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 Gene3D G3DSA:3.40.50.1370 145 320 5.7E-69 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 SUPERFAMILY SSF53671 4 334 2.49E-95 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PANTHER PTHR11405 298 336 9.6E-195 T 13-09-2016 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PANTHER PTHR11405:SF44 298 336 9.6E-195 T 13-09-2016 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 331 4.3E-52 T 13-09-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.1E-43 T 13-09-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 Gene3D G3DSA:3.40.50.1370 3 144 1.1E-53 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 8.9E-25 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 8.9E-25 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 8.9E-25 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 298 321 8.9E-25 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 2.3E-29 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 2.3E-29 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 2.3E-29 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 2.3E-29 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 312 323 2.3E-29 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS14090 a890886df6098e5b8e18df1fd8fd7982 336 PANTHER PTHR11405 1 276 9.6E-195 T 13-09-2016 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 1.8E-37 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 1.8E-37 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 1.8E-37 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 1.8E-37 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 Gene3D G3DSA:1.10.8.60 355 437 1.6E-29 T 13-09-2016 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 651 1.4E-48 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 326 3.6E-12 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 739 0.0 T 13-09-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 SMART SM01086 657 747 8.0E-34 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 Gene3D G3DSA:3.40.50.300 174 354 3.4E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 SUPERFAMILY SSF81923 1 142 2.88E-60 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 8.0E-25 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 SUPERFAMILY SSF52540 171 427 1.42E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 13-09-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 Gene3D G3DSA:1.10.1780.10 1 142 5.5E-43 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 SMART SM00382 491 658 1.1E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 SMART SM00382 210 355 3.2E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 PANTHER PTHR11638 1 754 0.0 T 13-09-2016 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 PANTHER PTHR11638:SF111 1 754 0.0 T 13-09-2016 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 Gene3D G3DSA:1.10.8.60 669 752 2.9E-31 T 13-09-2016 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 Gene3D G3DSA:3.40.50.300 445 668 7.1E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 SUPERFAMILY SSF52540 441 739 6.69E-79 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 13-09-2016 IPR028299 ClpA/B, conserved site 2 PMA3_RS19600 bf0e1e716d29e5ef9ee9a8768a8ceaae 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 3.9E-15 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS19390 4b8b9058593cb25fe286141e320506d4 443 SUPERFAMILY SSF46785 3 72 9.05E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19390 4b8b9058593cb25fe286141e320506d4 443 SUPERFAMILY SSF53383 85 439 1.1E-80 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS19390 4b8b9058593cb25fe286141e320506d4 443 Gene3D G3DSA:3.40.640.10 117 336 2.0E-65 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS19390 4b8b9058593cb25fe286141e320506d4 443 PANTHER PTHR11751 88 432 3.5E-65 T 13-09-2016 PMA3_RS19390 4b8b9058593cb25fe286141e320506d4 443 Pfam PF00155 Aminotransferase class I and II 88 433 2.9E-36 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS19390 4b8b9058593cb25fe286141e320506d4 443 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 1.0E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS19390 4b8b9058593cb25fe286141e320506d4 443 SMART SM00345 9 68 5.5E-10 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS19390 4b8b9058593cb25fe286141e320506d4 443 Gene3D G3DSA:1.10.10.10 3 70 5.0E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21875 d17ec0598730cf04ff90b532652d3fa4 432 PANTHER PTHR21600:SF2 2 323 1.1E-93 T 13-09-2016 PMA3_RS21875 d17ec0598730cf04ff90b532652d3fa4 432 Pfam PF01479 S4 domain 18 62 1.3E-10 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS21875 d17ec0598730cf04ff90b532652d3fa4 432 SMART SM00363 17 74 4.5E-10 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS21875 d17ec0598730cf04ff90b532652d3fa4 432 SUPERFAMILY SSF55174 18 109 1.68E-14 T 13-09-2016 PMA3_RS21875 d17ec0598730cf04ff90b532652d3fa4 432 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 85 247 9.2E-52 T 13-09-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PMA3_RS21875 d17ec0598730cf04ff90b532652d3fa4 432 Pfam PF00849 RNA pseudouridylate synthase 81 212 2.4E-14 T 13-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS21875 d17ec0598730cf04ff90b532652d3fa4 432 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 119 133 - T 13-09-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PMA3_RS21875 d17ec0598730cf04ff90b532652d3fa4 432 PANTHER PTHR21600 2 323 1.1E-93 T 13-09-2016 PMA3_RS21875 d17ec0598730cf04ff90b532652d3fa4 432 SUPERFAMILY SSF55120 80 251 1.06E-41 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS21875 d17ec0598730cf04ff90b532652d3fa4 432 Gene3D G3DSA:3.10.290.10 16 74 6.4E-16 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 293 394 7.1E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 PANTHER PTHR24423:SF554 65 394 5.3E-74 T 13-09-2016 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 Gene3D G3DSA:1.10.287.130 179 246 1.2E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 Pfam PF00512 His Kinase A (phospho-acceptor) domain 184 248 1.1E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 SUPERFAMILY SSF47384 176 248 1.29E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 374 7.9E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 341 7.9E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 355 7.9E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 393 7.9E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 SUPERFAMILY SSF55874 240 398 3.67E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 Pfam PF13188 PAS domain 79 133 1.3E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 SMART SM00091 78 141 1.5E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 SUPERFAMILY SSF55785 78 138 1.61E-10 T 13-09-2016 IPR000014 PAS domain PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 SMART SM00388 184 250 2.4E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 PANTHER PTHR24423 65 394 5.3E-74 T 13-09-2016 PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 Gene3D G3DSA:3.30.565.10 266 394 4.1E-31 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 SMART SM00387 290 396 4.0E-25 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21745 37165581ab02a8fc1bd19fe889225fda 406 Gene3D G3DSA:3.30.450.20 73 140 3.5E-11 T 13-09-2016 PMA3_RS21360 7d2e7ef93afcdf80dcc78bf5c9072b58 296 SUPERFAMILY SSF51735 2 162 1.41E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS21360 7d2e7ef93afcdf80dcc78bf5c9072b58 296 PANTHER PTHR22981 1 296 7.9E-132 T 13-09-2016 PMA3_RS21360 7d2e7ef93afcdf80dcc78bf5c9072b58 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 1.7E-51 T 13-09-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PMA3_RS21360 7d2e7ef93afcdf80dcc78bf5c9072b58 296 PIRSF PIRSF000103 1 291 1.7E-74 T 13-09-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PMA3_RS21360 7d2e7ef93afcdf80dcc78bf5c9072b58 296 PANTHER PTHR22981:SF70 1 296 7.9E-132 T 13-09-2016 PMA3_RS21360 7d2e7ef93afcdf80dcc78bf5c9072b58 296 Gene3D G3DSA:1.10.1040.10 165 292 1.0E-39 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS21360 7d2e7ef93afcdf80dcc78bf5c9072b58 296 SUPERFAMILY SSF48179 164 291 3.85E-37 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS21360 7d2e7ef93afcdf80dcc78bf5c9072b58 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 283 2.5E-35 T 13-09-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PMA3_RS21360 7d2e7ef93afcdf80dcc78bf5c9072b58 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 291 4.1E-120 T 13-09-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 PMA3_RS21360 7d2e7ef93afcdf80dcc78bf5c9072b58 296 Gene3D G3DSA:3.40.50.720 1 163 8.2E-58 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20800 0bcc2699494087d1c97b174f66aaa607 181 PIRSF PIRSF001296 1 181 7.7E-63 T 13-09-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PMA3_RS20800 0bcc2699494087d1c97b174f66aaa607 181 Pfam PF02669 K+-transporting ATPase, c chain 6 179 1.7E-59 T 13-09-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PMA3_RS20800 0bcc2699494087d1c97b174f66aaa607 181 PANTHER PTHR30042:SF2 1 181 4.4E-72 T 13-09-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PMA3_RS20800 0bcc2699494087d1c97b174f66aaa607 181 PANTHER PTHR30042 1 181 4.4E-72 T 13-09-2016 PMA3_RS20800 0bcc2699494087d1c97b174f66aaa607 181 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 181 31.84 T 13-09-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PMA3_RS20800 0bcc2699494087d1c97b174f66aaa607 181 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 5 181 5.3E-56 T 13-09-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PMA3_RS04330 61f272b13865f048fda4bc86bf227a06 340 PANTHER PTHR13393:SF0 15 324 1.1E-131 T 13-09-2016 PMA3_RS04330 61f272b13865f048fda4bc86bf227a06 340 Gene3D G3DSA:3.40.50.150 99 230 7.8E-13 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04330 61f272b13865f048fda4bc86bf227a06 340 Pfam PF05971 Protein of unknown function (DUF890) 27 324 2.4E-130 T 13-09-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 PMA3_RS04330 61f272b13865f048fda4bc86bf227a06 340 PANTHER PTHR13393 15 324 1.1E-131 T 13-09-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 PMA3_RS04330 61f272b13865f048fda4bc86bf227a06 340 PIRSF PIRSF029038 17 337 3.1E-151 T 13-09-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 PMA3_RS04330 61f272b13865f048fda4bc86bf227a06 340 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 28 327 53.662 T 13-09-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 PMA3_RS04330 61f272b13865f048fda4bc86bf227a06 340 SUPERFAMILY SSF53335 66 323 7.52E-31 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 41 424 2.9E-100 T 13-09-2016 IPR017439 Amidohydrolase GO:0016787 PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 Pfam PF01546 Peptidase family M20/M25/M40 98 433 2.4E-30 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 Gene3D G3DSA:3.30.70.360 228 344 7.6E-29 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 PANTHER PTHR11014:SF63 38 440 1.8E-127 T 13-09-2016 PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 PANTHER PTHR11014 38 440 1.8E-127 T 13-09-2016 PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 Gene3D G3DSA:3.40.630.10 345 435 2.8E-96 T 13-09-2016 PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 Gene3D G3DSA:3.40.630.10 22 224 2.8E-96 T 13-09-2016 PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 SUPERFAMILY SSF55031 230 335 2.75E-25 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 Pfam PF07687 Peptidase dimerisation domain 232 319 1.2E-9 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 PIRSF PIRSF005962 29 440 8.5E-114 T 13-09-2016 IPR017439 Amidohydrolase GO:0016787 PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 SUPERFAMILY SSF53187 345 435 4.65E-80 T 13-09-2016 PMA3_RS12670 ca835df7918e5cb437f7d78e0e255580 443 SUPERFAMILY SSF53187 30 243 4.65E-80 T 13-09-2016 PMA3_RS15090 5d4862ee9ec1cd05406b116647b48508 526 SMART SM00028 410 443 3.9E-7 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS15090 5d4862ee9ec1cd05406b116647b48508 526 Pfam PF13519 von Willebrand factor type A domain 97 203 6.1E-16 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15090 5d4862ee9ec1cd05406b116647b48508 526 Gene3D G3DSA:3.40.50.410 94 266 0.001 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15090 5d4862ee9ec1cd05406b116647b48508 526 SUPERFAMILY SSF53300 95 269 2.97E-17 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15090 5d4862ee9ec1cd05406b116647b48508 526 SUPERFAMILY SSF48452 384 467 3.8E-13 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS15090 5d4862ee9ec1cd05406b116647b48508 526 SMART SM00327 94 258 2.0E-9 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15090 5d4862ee9ec1cd05406b116647b48508 526 Gene3D G3DSA:1.25.40.10 385 465 7.2E-14 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS15090 5d4862ee9ec1cd05406b116647b48508 526 PANTHER PTHR22550 3 236 6.5E-18 T 13-09-2016 PMA3_RS15090 5d4862ee9ec1cd05406b116647b48508 526 Pfam PF00515 Tetratricopeptide repeat 410 443 5.4E-8 T 13-09-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 PMA3_RS17415 aaa18e4465ee15dd821f76a2564e45ae 221 Pfam PF01144 Coenzyme A transferase 6 201 4.8E-44 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS17415 aaa18e4465ee15dd821f76a2564e45ae 221 SUPERFAMILY SSF100950 5 217 8.79E-75 T 13-09-2016 PMA3_RS17415 aaa18e4465ee15dd821f76a2564e45ae 221 Gene3D G3DSA:3.40.810.20 4 213 3.2E-91 T 13-09-2016 PMA3_RS17415 aaa18e4465ee15dd821f76a2564e45ae 221 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 4.3E-100 T 13-09-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 PMA3_RS17415 aaa18e4465ee15dd821f76a2564e45ae 221 SMART SM00882 6 202 9.0E-74 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS17415 aaa18e4465ee15dd821f76a2564e45ae 221 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 13-09-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 PMA3_RS17415 aaa18e4465ee15dd821f76a2564e45ae 221 PANTHER PTHR13707 5 221 9.4E-118 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS26720 6f9560b4906a6db54fd8d3c5499e9c1d 218 Pfam PF09335 SNARE associated Golgi protein 47 172 4.7E-24 T 13-09-2016 IPR032816 SNARE associated Golgi protein PMA3_RS26720 6f9560b4906a6db54fd8d3c5499e9c1d 218 PANTHER PTHR30353 1 207 4.1E-87 T 13-09-2016 IPR032818 DedA family PMA3_RS26720 6f9560b4906a6db54fd8d3c5499e9c1d 218 PANTHER PTHR30353:SF0 1 207 4.1E-87 T 13-09-2016 PMA3_RS07175 80d8837f652795fbd4c026b63fd4d007 200 PANTHER PTHR19136:SF81 8 192 1.7E-39 T 13-09-2016 PMA3_RS07175 80d8837f652795fbd4c026b63fd4d007 200 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 10 192 4.0E-57 T 13-09-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 PMA3_RS07175 80d8837f652795fbd4c026b63fd4d007 200 SUPERFAMILY SSF53448 9 190 3.34E-29 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS07175 80d8837f652795fbd4c026b63fd4d007 200 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 8 195 23.089 T 13-09-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 PMA3_RS07175 80d8837f652795fbd4c026b63fd4d007 200 Gene3D G3DSA:3.90.550.10 8 193 4.1E-45 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS07175 80d8837f652795fbd4c026b63fd4d007 200 Pfam PF12804 MobA-like NTP transferase domain 13 169 2.8E-31 T 13-09-2016 IPR025877 MobA-like NTP transferase PMA3_RS07175 80d8837f652795fbd4c026b63fd4d007 200 PANTHER PTHR19136 8 192 1.7E-39 T 13-09-2016 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 SUPERFAMILY SSF46557 4 78 3.79E-25 T 13-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 PANTHER PTHR30437 1 156 9.0E-57 T 13-09-2016 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 Gene3D G3DSA:3.10.50.30 81 156 1.2E-30 T 13-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 30.874 T 13-09-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 4.0E-27 T 13-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 13-09-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.0E-51 T 13-09-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 Gene3D G3DSA:1.10.287.180 3 75 2.0E-28 T 13-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 13-09-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 PIRSF PIRSF006092 1 158 1.7E-48 T 13-09-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 SUPERFAMILY SSF54534 82 157 2.62E-23 T 13-09-2016 PMA3_RS25555 1a648c7d8caacbef405dfe6095440a9f 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.4E-26 T 13-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Gene3D G3DSA:3.30.56.20 404 476 1.6E-24 T 13-09-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 786 47.014 T 13-09-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 SMART SM00896 699 792 4.9E-43 T 13-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Gene3D G3DSA:3.50.40.10 198 392 5.2E-80 T 13-09-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 PANTHER PTHR10947 2 792 0.0 T 13-09-2016 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Gene3D G3DSA:3.30.930.10 498 687 7.4E-64 T 13-09-2016 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Gene3D G3DSA:3.30.70.380 701 792 3.6E-30 T 13-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 792 2.1E-260 T 13-09-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Gene3D G3DSA:2.40.50.140 42 153 1.0E-44 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 SUPERFAMILY SSF46955 404 476 6.59E-18 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Pfam PF03483 B3/4 domain 211 385 2.5E-68 T 13-09-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Gene3D G3DSA:3.30.56.10 1 38 3.2E-24 T 13-09-2016 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Gene3D G3DSA:3.30.56.10 154 182 3.2E-24 T 13-09-2016 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Pfam PF01588 Putative tRNA binding domain 45 144 2.3E-23 T 13-09-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 SMART SM00874 403 472 2.5E-27 T 13-09-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 SUPERFAMILY SSF54991 693 792 2.35E-30 T 13-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 SMART SM00873 211 385 4.6E-92 T 13-09-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 SUPERFAMILY SSF50249 36 192 1.49E-49 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 SUPERFAMILY SSF56037 194 396 4.45E-72 T 13-09-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Pfam PF03484 tRNA synthetase B5 domain 406 472 1.9E-18 T 13-09-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 SUPERFAMILY SSF55681 468 684 3.83E-54 T 13-09-2016 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 PANTHER PTHR10947:SF0 2 792 0.0 T 13-09-2016 PMA3_RS09380 91383149a2309803b12ff66ca392a8c5 793 Pfam PF03147 Ferredoxin-fold anticodon binding domain 699 792 2.2E-28 T 13-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PMA3_RS27935 791a801f4a6d0eabb1b280a56b8b0918 399 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 2 395 2.7E-228 T 13-09-2016 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 PMA3_RS27935 791a801f4a6d0eabb1b280a56b8b0918 399 PANTHER PTHR11695 15 396 1.5E-187 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS27935 791a801f4a6d0eabb1b280a56b8b0918 399 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 144 5.8E-26 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS27935 791a801f4a6d0eabb1b280a56b8b0918 399 Gene3D G3DSA:3.40.50.720 189 308 7.5E-25 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27935 791a801f4a6d0eabb1b280a56b8b0918 399 PANTHER PTHR11695:SF586 15 396 1.5E-187 T 13-09-2016 PMA3_RS27935 791a801f4a6d0eabb1b280a56b8b0918 399 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 13-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PMA3_RS27935 791a801f4a6d0eabb1b280a56b8b0918 399 SUPERFAMILY SSF51735 162 356 1.86E-64 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27935 791a801f4a6d0eabb1b280a56b8b0918 399 SUPERFAMILY SSF50129 4 187 9.59E-63 T 13-09-2016 IPR011032 GroES-like PMA3_RS27935 791a801f4a6d0eabb1b280a56b8b0918 399 Gene3D G3DSA:3.90.180.10 5 188 5.0E-46 T 13-09-2016 IPR011032 GroES-like PMA3_RS30345 bb76efcf47c76b964113bdbbde991ce9 213 PANTHER PTHR35891 1 210 7.7E-69 T 13-09-2016 PMA3_RS30345 bb76efcf47c76b964113bdbbde991ce9 213 Gene3D G3DSA:3.40.30.10 31 206 1.2E-56 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS30345 bb76efcf47c76b964113bdbbde991ce9 213 Pfam PF01323 DSBA-like thioredoxin domain 95 185 6.1E-15 T 13-09-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PMA3_RS30345 bb76efcf47c76b964113bdbbde991ce9 213 PIRSF PIRSF001488 1 208 3.0E-71 T 13-09-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL PMA3_RS30345 bb76efcf47c76b964113bdbbde991ce9 213 PANTHER PTHR35891:SF2 1 210 7.7E-69 T 13-09-2016 PMA3_RS30345 bb76efcf47c76b964113bdbbde991ce9 213 ProSitePatterns PS00194 Thioredoxin family active site. 47 65 - T 13-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PMA3_RS30345 bb76efcf47c76b964113bdbbde991ce9 213 SUPERFAMILY SSF52833 36 202 1.8E-43 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS00500 d41860ad66aee297b263209aff0355bd 193 Gene3D G3DSA:1.10.1740.10 10 119 1.8E-29 T 13-09-2016 PMA3_RS00500 d41860ad66aee297b263209aff0355bd 193 SUPERFAMILY SSF88946 12 114 7.65E-28 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS00500 d41860ad66aee297b263209aff0355bd 193 PANTHER PTHR30173:SF29 4 191 2.5E-77 T 13-09-2016 PMA3_RS00500 d41860ad66aee297b263209aff0355bd 193 SUPERFAMILY SSF88659 113 189 1.29E-13 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS00500 d41860ad66aee297b263209aff0355bd 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 186 3.2E-29 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS00500 d41860ad66aee297b263209aff0355bd 193 PANTHER PTHR30173 4 191 2.5E-77 T 13-09-2016 PMA3_RS00500 d41860ad66aee297b263209aff0355bd 193 Pfam PF08281 Sigma-70, region 4 131 179 1.4E-10 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS00500 d41860ad66aee297b263209aff0355bd 193 Gene3D G3DSA:1.10.10.10 129 190 3.5E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00500 d41860ad66aee297b263209aff0355bd 193 Pfam PF04542 Sigma-70 region 2 31 96 1.0E-16 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS19385 fd1457f8523d744db66ceafac401c706 139 Gene3D G3DSA:3.30.300.20 48 138 8.5E-31 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS19385 fd1457f8523d744db66ceafac401c706 139 PANTHER PTHR33797 3 139 2.9E-62 T 13-09-2016 PMA3_RS19385 fd1457f8523d744db66ceafac401c706 139 SUPERFAMILY SSF82784 9 138 6.67E-40 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS19385 fd1457f8523d744db66ceafac401c706 139 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 9 137 7.5E-46 T 13-09-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 PMA3_RS19385 fd1457f8523d744db66ceafac401c706 139 Gene3D G3DSA:2.20.25.10 4 47 5.1E-20 T 13-09-2016 PMA3_RS19385 fd1457f8523d744db66ceafac401c706 139 PANTHER PTHR33797:SF3 3 139 2.9E-62 T 13-09-2016 PMA3_RS19385 fd1457f8523d744db66ceafac401c706 139 Pfam PF02566 OsmC-like protein 41 136 2.5E-18 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS06850 10e6eab130bcf2897cf72bcd0aec8ada 63 PANTHER PTHR34984:SF1 1 52 3.5E-19 T 13-09-2016 PMA3_RS06850 10e6eab130bcf2897cf72bcd0aec8ada 63 PANTHER PTHR34984 1 52 3.5E-19 T 13-09-2016 PMA3_RS06850 10e6eab130bcf2897cf72bcd0aec8ada 63 SUPERFAMILY SSF117130 1 52 2.35E-17 T 13-09-2016 PMA3_RS06850 10e6eab130bcf2897cf72bcd0aec8ada 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 53 1.8E-23 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS06850 10e6eab130bcf2897cf72bcd0aec8ada 63 Pfam PF02599 Global regulator protein family 1 52 6.1E-22 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS06850 10e6eab130bcf2897cf72bcd0aec8ada 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 5.0E-16 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 Gene3D G3DSA:3.50.50.60 3 176 2.7E-41 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 Gene3D G3DSA:3.50.50.60 374 411 2.7E-41 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 11 201 1.6E-28 T 13-09-2016 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.3E-9 T 13-09-2016 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 2.3E-9 T 13-09-2016 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 139 2.3E-9 T 13-09-2016 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 PANTHER PTHR23023 5 212 6.2E-64 T 13-09-2016 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 PANTHER PTHR23023 263 412 6.2E-64 T 13-09-2016 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 SUPERFAMILY SSF51905 6 204 3.53E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 Gene3D G3DSA:3.50.50.60 177 247 1.2E-4 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 PANTHER PTHR23023:SF4 263 412 6.2E-64 T 13-09-2016 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 8.5E-5 T 13-09-2016 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 8.5E-5 T 13-09-2016 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 SUPERFAMILY SSF51905 166 235 2.07E-5 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 SUPERFAMILY SSF51905 288 408 2.07E-5 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02840 ae3b30cd915cc017787f9999e6ecee56 421 PANTHER PTHR23023:SF4 5 212 6.2E-64 T 13-09-2016 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 SMART SM00958 228 358 3.6E-71 T 13-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 SUPERFAMILY SSF81767 227 368 2.09E-39 T 13-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 Pfam PF02810 SEC-C motif 891 909 1.4E-8 T 13-09-2016 IPR004027 SEC-C motif PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 SUPERFAMILY SSF81886 620 840 1.83E-79 T 13-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 SUPERFAMILY SSF81886 887 899 1.83E-79 T 13-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 Gene3D G3DSA:1.10.3060.10 648 831 4.6E-60 T 13-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 Gene3D G3DSA:3.40.50.300 417 619 1.2E-87 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 Gene3D G3DSA:3.90.1440.10 230 368 3.3E-41 T 13-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.755 T 13-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 SMART SM00957 6 402 1.4E-297 T 13-09-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 Gene3D G3DSA:3.40.50.300 3 228 1.0E-126 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 Gene3D G3DSA:3.40.50.300 369 416 1.0E-126 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 PRINTS PR00906 SecA protein signature 117 127 1.5E-69 T 13-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 PRINTS PR00906 SecA protein signature 170 190 1.5E-69 T 13-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 PRINTS PR00906 SecA protein signature 413 426 1.5E-69 T 13-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 PRINTS PR00906 SecA protein signature 339 361 1.5E-69 T 13-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 PRINTS PR00906 SecA protein signature 101 115 1.5E-69 T 13-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 PRINTS PR00906 SecA protein signature 63 87 1.5E-69 T 13-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 PRINTS PR00906 SecA protein signature 376 393 1.5E-69 T 13-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 818 0.0 T 13-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 SUPERFAMILY SSF52540 368 415 1.3E-84 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 SUPERFAMILY SSF52540 5 228 1.3E-84 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 SUPERFAMILY SSF52540 417 618 1.58E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.1E-68 T 13-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 Pfam PF07517 SecA DEAD-like domain 6 401 3.0E-132 T 13-09-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 PANTHER PTHR30612 550 911 0.0 T 13-09-2016 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 PANTHER PTHR30612 5 520 0.0 T 13-09-2016 PMA3_RS23355 0efd6a2f7d6128ebfb80a1872018edcb 911 Pfam PF01043 SecA preprotein cross-linking domain 232 358 2.5E-33 T 13-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 PANTHER PTHR13847 6 61 1.3E-89 T 13-09-2016 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 SUPERFAMILY SSF54373 270 355 9.81E-5 T 13-09-2016 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 Pfam PF01266 FAD dependent oxidoreductase 5 394 3.9E-52 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 Gene3D G3DSA:3.30.9.10 137 188 3.1E-4 T 13-09-2016 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 Gene3D G3DSA:3.30.9.10 267 305 3.1E-4 T 13-09-2016 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 Gene3D G3DSA:3.50.50.60 109 131 2.3E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 Gene3D G3DSA:3.50.50.60 189 266 2.3E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 Gene3D G3DSA:3.50.50.60 2 59 2.3E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 Gene3D G3DSA:3.50.50.60 355 412 2.3E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 SUPERFAMILY SSF51905 108 267 9.97E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 SUPERFAMILY SSF51905 355 412 9.97E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 SUPERFAMILY SSF51905 4 57 9.97E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 PANTHER PTHR13847 108 413 1.3E-89 T 13-09-2016 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 PANTHER PTHR13847:SF216 6 61 1.3E-89 T 13-09-2016 PMA3_RS09485 07fdd5d60a61f9b00209e98b6cffc881 413 PANTHER PTHR13847:SF216 108 413 1.3E-89 T 13-09-2016 PMA3_RS00795 b5dbb82fe4a00f5144620ae0fb233593 246 Gene3D G3DSA:1.10.10.10 139 241 2.0E-31 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00795 b5dbb82fe4a00f5144620ae0fb233593 246 PANTHER PTHR26402 11 243 2.2E-100 T 13-09-2016 PMA3_RS00795 b5dbb82fe4a00f5144620ae0fb233593 246 SUPERFAMILY SSF46894 138 240 1.62E-26 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS00795 b5dbb82fe4a00f5144620ae0fb233593 246 PANTHER PTHR26402:SF292 11 243 2.2E-100 T 13-09-2016 PMA3_RS00795 b5dbb82fe4a00f5144620ae0fb233593 246 SUPERFAMILY SSF52172 8 131 5.27E-39 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS00795 b5dbb82fe4a00f5144620ae0fb233593 246 Gene3D G3DSA:3.40.50.2300 11 130 3.8E-39 T 13-09-2016 PMA3_RS00795 b5dbb82fe4a00f5144620ae0fb233593 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 238 1.1E-21 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS00795 b5dbb82fe4a00f5144620ae0fb233593 246 SMART SM00862 161 238 1.1E-23 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS00795 b5dbb82fe4a00f5144620ae0fb233593 246 Pfam PF00072 Response regulator receiver domain 13 123 3.6E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS00795 b5dbb82fe4a00f5144620ae0fb233593 246 SMART SM00448 11 122 2.0E-40 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS22105 823d0f34bc4bf194d16a30f3814f36e0 448 SUPERFAMILY SSF52540 72 355 5.74E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22105 823d0f34bc4bf194d16a30f3814f36e0 448 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 13-09-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PMA3_RS22105 823d0f34bc4bf194d16a30f3814f36e0 448 SMART SM00487 19 221 3.5E-49 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS22105 823d0f34bc4bf194d16a30f3814f36e0 448 SMART SM00490 257 338 1.2E-31 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS22105 823d0f34bc4bf194d16a30f3814f36e0 448 Pfam PF00270 DEAD/DEAH box helicase 24 186 7.6E-47 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS22105 823d0f34bc4bf194d16a30f3814f36e0 448 PANTHER PTHR24031 2 368 7.6E-152 T 13-09-2016 PMA3_RS22105 823d0f34bc4bf194d16a30f3814f36e0 448 Pfam PF00271 Helicase conserved C-terminal domain 234 338 4.4E-28 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS22105 823d0f34bc4bf194d16a30f3814f36e0 448 Gene3D G3DSA:3.40.50.300 218 373 8.3E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22105 823d0f34bc4bf194d16a30f3814f36e0 448 PANTHER PTHR24031:SF261 2 368 7.6E-152 T 13-09-2016 PMA3_RS22105 823d0f34bc4bf194d16a30f3814f36e0 448 Gene3D G3DSA:3.40.50.300 2 217 7.6E-72 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 SUPERFAMILY SSF58104 234 537 7.46E-74 T 13-09-2016 PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 535 9.4E-52 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 PANTHER PTHR32089 177 537 1.4E-112 T 13-09-2016 PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 Pfam PF00672 HAMP domain 188 256 6.5E-10 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 Gene3D G3DSA:1.10.287.950 289 507 1.7E-54 T 13-09-2016 PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 174 2.6E-7 T 13-09-2016 IPR024478 4HB MCP domain PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 SMART SM00283 275 536 1.9E-75 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 SMART SM00304 207 260 1.1E-6 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 296 325 7.3E-23 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 26 7.3E-23 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 373 400 7.3E-23 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS17110 acda667fdf3a4ff6f8fb00e3864c6383 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 431 7.3E-23 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS25330 d1ea5dc1549ddc8e38638fe1e3ff2468 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 298 2.1E-19 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS25330 d1ea5dc1549ddc8e38638fe1e3ff2468 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 317 1.2E-28 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS25330 d1ea5dc1549ddc8e38638fe1e3ff2468 326 PANTHER PTHR24220:SF493 6 319 3.5E-189 T 13-09-2016 PMA3_RS25330 d1ea5dc1549ddc8e38638fe1e3ff2468 326 Gene3D G3DSA:3.40.50.300 4 255 5.9E-80 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25330 d1ea5dc1549ddc8e38638fe1e3ff2468 326 SUPERFAMILY SSF52540 5 253 1.66E-72 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25330 d1ea5dc1549ddc8e38638fe1e3ff2468 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS25330 d1ea5dc1549ddc8e38638fe1e3ff2468 326 PANTHER PTHR24220 6 319 3.5E-189 T 13-09-2016 PMA3_RS25330 d1ea5dc1549ddc8e38638fe1e3ff2468 326 SMART SM00382 39 231 2.8E-17 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25330 d1ea5dc1549ddc8e38638fe1e3ff2468 326 Pfam PF00005 ABC transporter 30 182 1.1E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS21275 bccbaf0c07ac8405bdb0886651e173d3 122 PIRSF PIRSF000169 1 122 1.0E-43 T 13-09-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 PMA3_RS21275 bccbaf0c07ac8405bdb0886651e173d3 122 PANTHER PTHR38689:SF1 2 122 4.1E-53 T 13-09-2016 PMA3_RS21275 bccbaf0c07ac8405bdb0886651e173d3 122 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 84 9.6E-8 T 13-09-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 PMA3_RS21275 bccbaf0c07ac8405bdb0886651e173d3 122 SUPERFAMILY SSF81343 5 122 3.71E-28 T 13-09-2016 PMA3_RS21275 bccbaf0c07ac8405bdb0886651e173d3 122 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 120 2.8E-36 T 13-09-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 PMA3_RS21275 bccbaf0c07ac8405bdb0886651e173d3 122 Gene3D G3DSA:1.20.1300.10 1 122 1.9E-36 T 13-09-2016 PMA3_RS21275 bccbaf0c07ac8405bdb0886651e173d3 122 PANTHER PTHR38689 2 122 4.1E-53 T 13-09-2016 PMA3_RS14745 a869184ba260b5fea1953928d949147b 186 SUPERFAMILY SSF159594 25 175 9.94E-22 T 13-09-2016 PMA3_RS14745 a869184ba260b5fea1953928d949147b 186 Gene3D G3DSA:3.40.50.10610 19 178 8.9E-14 T 13-09-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PMA3_RS14745 a869184ba260b5fea1953928d949147b 186 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 28 171 4.7E-26 T 13-09-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PMA3_RS02185 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF00665 Integrase core domain 141 258 5.8E-19 T 13-09-2016 IPR001584 Integrase, catalytic core GO:0015074 PMA3_RS02185 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF53098 137 303 3.92E-27 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS02185 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF13518 Helix-turn-helix domain 11 62 6.8E-13 T 13-09-2016 PMA3_RS02185 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:3.30.420.10 138 297 4.1E-28 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS02185 699764bf1b30db86733b4d4f396cfdd6 392 PANTHER PTHR24559 140 260 2.5E-13 T 13-09-2016 PMA3_RS02185 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF46689 3 119 3.76E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02185 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:1.10.10.10 10 57 5.4E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20070 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF00665 Integrase core domain 141 258 5.8E-19 T 13-09-2016 IPR001584 Integrase, catalytic core GO:0015074 PMA3_RS20070 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF53098 137 303 3.92E-27 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS20070 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF13518 Helix-turn-helix domain 11 62 6.8E-13 T 13-09-2016 PMA3_RS20070 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:3.30.420.10 138 297 4.1E-28 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS20070 699764bf1b30db86733b4d4f396cfdd6 392 PANTHER PTHR24559 140 260 2.5E-13 T 13-09-2016 PMA3_RS20070 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF46689 3 119 3.76E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20070 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:1.10.10.10 10 57 5.4E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28110 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF00665 Integrase core domain 141 258 5.8E-19 T 13-09-2016 IPR001584 Integrase, catalytic core GO:0015074 PMA3_RS28110 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF53098 137 303 3.92E-27 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS28110 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF13518 Helix-turn-helix domain 11 62 6.8E-13 T 13-09-2016 PMA3_RS28110 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:3.30.420.10 138 297 4.1E-28 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS28110 699764bf1b30db86733b4d4f396cfdd6 392 PANTHER PTHR24559 140 260 2.5E-13 T 13-09-2016 PMA3_RS28110 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF46689 3 119 3.76E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28110 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:1.10.10.10 10 57 5.4E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21545 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF00665 Integrase core domain 141 258 5.8E-19 T 13-09-2016 IPR001584 Integrase, catalytic core GO:0015074 PMA3_RS21545 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF53098 137 303 3.92E-27 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS21545 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF13518 Helix-turn-helix domain 11 62 6.8E-13 T 13-09-2016 PMA3_RS21545 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:3.30.420.10 138 297 4.1E-28 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS21545 699764bf1b30db86733b4d4f396cfdd6 392 PANTHER PTHR24559 140 260 2.5E-13 T 13-09-2016 PMA3_RS21545 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF46689 3 119 3.76E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21545 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:1.10.10.10 10 57 5.4E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29460 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF00665 Integrase core domain 141 258 5.8E-19 T 13-09-2016 IPR001584 Integrase, catalytic core GO:0015074 PMA3_RS29460 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF53098 137 303 3.92E-27 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS29460 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF13518 Helix-turn-helix domain 11 62 6.8E-13 T 13-09-2016 PMA3_RS29460 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:3.30.420.10 138 297 4.1E-28 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS29460 699764bf1b30db86733b4d4f396cfdd6 392 PANTHER PTHR24559 140 260 2.5E-13 T 13-09-2016 PMA3_RS29460 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF46689 3 119 3.76E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS29460 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:1.10.10.10 10 57 5.4E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20770 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF00665 Integrase core domain 141 258 5.8E-19 T 13-09-2016 IPR001584 Integrase, catalytic core GO:0015074 PMA3_RS20770 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF53098 137 303 3.92E-27 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS20770 699764bf1b30db86733b4d4f396cfdd6 392 Pfam PF13518 Helix-turn-helix domain 11 62 6.8E-13 T 13-09-2016 PMA3_RS20770 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:3.30.420.10 138 297 4.1E-28 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS20770 699764bf1b30db86733b4d4f396cfdd6 392 PANTHER PTHR24559 140 260 2.5E-13 T 13-09-2016 PMA3_RS20770 699764bf1b30db86733b4d4f396cfdd6 392 SUPERFAMILY SSF46689 3 119 3.76E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20770 699764bf1b30db86733b4d4f396cfdd6 392 Gene3D G3DSA:1.10.10.10 10 57 5.4E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 64 266 8.9E-49 T 13-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 SUPERFAMILY SSF51306 77 271 4.45E-62 T 13-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 ProSitePatterns PS00761 Signal peptidases I signature 3. 221 234 - T 13-09-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 2.1E-25 T 13-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 216 235 2.1E-25 T 13-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 2.1E-25 T 13-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 Pfam PF00717 Peptidase S24-like 85 167 1.1E-21 T 13-09-2016 IPR019759 Peptidase S24/S26A/S26B PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 13-09-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 PANTHER PTHR12383:SF27 3 268 6.5E-91 T 13-09-2016 PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 13-09-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 PANTHER PTHR12383 3 268 6.5E-91 T 13-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 Gene3D G3DSA:2.10.109.10 75 153 7.5E-54 T 13-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PMA3_RS04370 b037c69be3e89e165f9906d3f0caa883 284 Gene3D G3DSA:2.10.109.10 216 268 7.5E-54 T 13-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PMA3_RS15495 c589826019259d362de5a5873d7a39e2 205 PANTHER PTHR42637 1 204 4.6E-69 T 13-09-2016 PMA3_RS15495 c589826019259d362de5a5873d7a39e2 205 Gene3D G3DSA:1.20.1260.10 3 199 1.8E-83 T 13-09-2016 IPR012347 Ferritin-related PMA3_RS15495 c589826019259d362de5a5873d7a39e2 205 PANTHER PTHR42637:SF1 1 204 4.6E-69 T 13-09-2016 PMA3_RS15495 c589826019259d362de5a5873d7a39e2 205 PIRSF PIRSF020736 1 201 1.1E-86 T 13-09-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 PMA3_RS15495 c589826019259d362de5a5873d7a39e2 205 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 2 52 2.5E-14 T 13-09-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 PMA3_RS15495 c589826019259d362de5a5873d7a39e2 205 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 54 196 1.7E-59 T 13-09-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 PMA3_RS15495 c589826019259d362de5a5873d7a39e2 205 SUPERFAMILY SSF47240 3 199 1.15E-74 T 13-09-2016 IPR009078 Ferritin-like superfamily PMA3_RS19865 f57cac56f9460cd5b94bcf6d0e3cac71 270 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 13-09-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PMA3_RS19865 f57cac56f9460cd5b94bcf6d0e3cac71 270 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 269 7.6E-97 T 13-09-2016 PMA3_RS19865 f57cac56f9460cd5b94bcf6d0e3cac71 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 262 2.2E-27 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS19865 f57cac56f9460cd5b94bcf6d0e3cac71 270 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 13-09-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PMA3_RS19865 f57cac56f9460cd5b94bcf6d0e3cac71 270 SUPERFAMILY SSF56219 1 269 1.7E-85 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS19865 f57cac56f9460cd5b94bcf6d0e3cac71 270 PANTHER PTHR22748 1 269 2.3E-129 T 13-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PMA3_RS19865 f57cac56f9460cd5b94bcf6d0e3cac71 270 Gene3D G3DSA:3.60.10.10 1 269 1.2E-81 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS19865 f57cac56f9460cd5b94bcf6d0e3cac71 270 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 269 3.2E-84 T 13-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PMA3_RS19865 f57cac56f9460cd5b94bcf6d0e3cac71 270 PANTHER PTHR22748:SF7 1 269 2.3E-129 T 13-09-2016 PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 SUPERFAMILY SSF46785 4 115 4.25E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 Gene3D G3DSA:1.10.10.10 4 84 2.6E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 Gene3D G3DSA:3.40.190.10 94 179 2.4E-23 T 13-09-2016 PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 Pfam PF03466 LysR substrate binding domain 92 298 3.7E-39 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 SUPERFAMILY SSF53850 93 301 1.7E-36 T 13-09-2016 PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.8E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.8E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.8E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.5E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 Gene3D G3DSA:3.40.190.10 180 269 3.0E-36 T 13-09-2016 PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 PANTHER PTHR30346 4 300 1.0E-162 T 13-09-2016 PMA3_RS02815 ea1a7443b4da49a656dad474baf0456b 306 PANTHER PTHR30346:SF13 4 300 1.0E-162 T 13-09-2016 PMA3_RS19125 ee797d0f37715af4770253c8fdb73772 552 PANTHER PTHR10342 4 187 7.3E-102 T 13-09-2016 PMA3_RS19125 ee797d0f37715af4770253c8fdb73772 552 PANTHER PTHR10342 219 482 7.3E-102 T 13-09-2016 PMA3_RS19125 ee797d0f37715af4770253c8fdb73772 552 Gene3D G3DSA:3.30.1120.10 399 482 6.1E-10 T 13-09-2016 PMA3_RS19125 ee797d0f37715af4770253c8fdb73772 552 SUPERFAMILY SSF53649 30 174 1.89E-104 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS19125 ee797d0f37715af4770253c8fdb73772 552 SUPERFAMILY SSF53649 203 493 1.89E-104 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS19125 ee797d0f37715af4770253c8fdb73772 552 Pfam PF14707 C-terminal region of aryl-sulfatase 407 507 9.9E-8 T 13-09-2016 PMA3_RS19125 ee797d0f37715af4770253c8fdb73772 552 Gene3D G3DSA:3.40.720.10 30 398 1.6E-91 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS19125 ee797d0f37715af4770253c8fdb73772 552 Pfam PF00884 Sulfatase 33 378 7.9E-59 T 13-09-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 PANTHER PTHR30050:SF2 1 102 8.5E-234 T 13-09-2016 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 SUPERFAMILY SSF48295 402 504 8.63E-37 T 13-09-2016 IPR010921 Trp repressor/replication initiator GO:0043565 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 Pfam PF11638 DnaA N-terminal domain 4 64 1.1E-20 T 13-09-2016 IPR024633 DnaA N-terminal domain PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 415 483 7.7E-32 T 13-09-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 SUPERFAMILY SSF52540 172 382 3.05E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 504 1.2E-190 T 13-09-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 PANTHER PTHR30050:SF2 169 506 8.5E-234 T 13-09-2016 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 ProSitePatterns PS01008 DnaA protein signature. 464 483 - T 13-09-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 Pfam PF00308 Bacterial dnaA protein 171 388 1.1E-100 T 13-09-2016 IPR013317 Chromosomal replication initiator protein DnaA PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 Gene3D G3DSA:3.40.50.300 164 335 1.8E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 PANTHER PTHR30050 1 102 8.5E-234 T 13-09-2016 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 SMART SM00760 414 483 5.3E-44 T 13-09-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 Gene3D G3DSA:1.10.1750.10 405 505 8.2E-41 T 13-09-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 PANTHER PTHR30050 169 506 8.5E-234 T 13-09-2016 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 268 282 6.5E-53 T 13-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 204 224 6.5E-53 T 13-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 236 250 6.5E-53 T 13-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 302 329 6.5E-53 T 13-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 464 483 6.5E-53 T 13-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 505 34.142 T 13-09-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 Gene3D G3DSA:1.10.8.60 337 404 2.5E-29 T 13-09-2016 PMA3_RS30095 b80a87213e9606e37a2267fe94302eb6 506 SMART SM00382 203 408 8.4E-7 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS04480 f9fbd7ac02372cd2c14d6c09ea0b1089 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 4.4E-20 T 13-09-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PMA3_RS04480 f9fbd7ac02372cd2c14d6c09ea0b1089 298 Gene3D G3DSA:1.10.443.10 113 289 1.7E-57 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS04480 f9fbd7ac02372cd2c14d6c09ea0b1089 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 298 63.65 T 13-09-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 PMA3_RS04480 f9fbd7ac02372cd2c14d6c09ea0b1089 298 Pfam PF00589 Phage integrase family 113 283 7.2E-52 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS04480 f9fbd7ac02372cd2c14d6c09ea0b1089 298 PANTHER PTHR30349 1 297 4.9E-121 T 13-09-2016 PMA3_RS04480 f9fbd7ac02372cd2c14d6c09ea0b1089 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 297 1.5E-117 T 13-09-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 PMA3_RS04480 f9fbd7ac02372cd2c14d6c09ea0b1089 298 PANTHER PTHR30349:SF5 1 297 4.9E-121 T 13-09-2016 PMA3_RS04480 f9fbd7ac02372cd2c14d6c09ea0b1089 298 Gene3D G3DSA:1.10.150.130 7 100 2.0E-28 T 13-09-2016 IPR023109 Integrase/recombinase, N-terminal PMA3_RS04480 f9fbd7ac02372cd2c14d6c09ea0b1089 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 298 30.827 T 13-09-2016 IPR023009 Tyrosine recombinase XerC/XerD PMA3_RS04480 f9fbd7ac02372cd2c14d6c09ea0b1089 298 SUPERFAMILY SSF56349 8 288 2.06E-56 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 SUPERFAMILY SSF52518 52 459 3.04E-133 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 Gene3D G3DSA:3.40.50.920 698 879 3.2E-77 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PANTHER PTHR11624 779 863 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PANTHER PTHR11624 464 527 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PANTHER PTHR11624 69 288 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PANTHER PTHR11624:SF72 356 447 0.0 T 13-09-2016 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PANTHER PTHR11624:SF72 545 760 0.0 T 13-09-2016 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 Gene3D G3DSA:3.40.50.970 51 459 1.7E-149 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 2 879 0.0 T 13-09-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PIRSF PIRSF000156 1 881 0.0 T 13-09-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 SUPERFAMILY SSF52922 693 879 1.92E-60 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PANTHER PTHR11624:SF72 779 863 0.0 T 13-09-2016 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PANTHER PTHR11624:SF72 464 527 0.0 T 13-09-2016 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PANTHER PTHR11624:SF72 69 288 0.0 T 13-09-2016 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 Gene3D G3DSA:3.40.50.970 466 696 2.1E-119 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 SUPERFAMILY SSF52518 466 692 6.36E-96 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 135 287 1.3E-6 T 13-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PANTHER PTHR11624 356 447 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS01770 d79783e2ccc7fabfc341c35cb8eefeda 881 PANTHER PTHR11624 545 760 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.9E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.9E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.9E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.9E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.9E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 PANTHER PTHR24322 7 134 1.8E-48 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 PANTHER PTHR24322 150 182 1.8E-48 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 Pfam PF00106 short chain dehydrogenase 5 190 2.5E-51 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 SUPERFAMILY SSF51735 5 261 5.0E-62 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 Gene3D G3DSA:3.40.50.720 5 228 1.2E-61 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.7E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.7E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06840 7033567eb7f118c5bd44521d89d98c2f 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.7E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02250 ca72e8e1ac0c1561462d3e27ec53d56a 238 SUPERFAMILY SSF52540 4 235 8.31E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02250 ca72e8e1ac0c1561462d3e27ec53d56a 238 PANTHER PTHR24220 7 236 1.8E-146 T 13-09-2016 PMA3_RS02250 ca72e8e1ac0c1561462d3e27ec53d56a 238 PIRSF PIRSF039137 1 238 6.5E-101 T 13-09-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 PMA3_RS02250 ca72e8e1ac0c1561462d3e27ec53d56a 238 Gene3D G3DSA:3.40.50.300 2 233 3.3E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02250 ca72e8e1ac0c1561462d3e27ec53d56a 238 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS02250 ca72e8e1ac0c1561462d3e27ec53d56a 238 PANTHER PTHR24220:SF515 7 236 1.8E-146 T 13-09-2016 PMA3_RS02250 ca72e8e1ac0c1561462d3e27ec53d56a 238 SMART SM00382 30 203 8.4E-5 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS02250 ca72e8e1ac0c1561462d3e27ec53d56a 238 Pfam PF00005 ABC transporter 21 165 2.5E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 PANTHER PTHR30244:SF1 298 352 2.7E-110 T 13-09-2016 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 PANTHER PTHR30244:SF1 2 189 2.7E-110 T 13-09-2016 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 PANTHER PTHR30244:SF1 402 492 2.7E-110 T 13-09-2016 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.0E-40 T 13-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 PRINTS PR00207 Flagellin signature 111 134 4.5E-20 T 13-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 PRINTS PR00207 Flagellin signature 37 54 4.5E-20 T 13-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 PRINTS PR00207 Flagellin signature 76 95 4.5E-20 T 13-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 Pfam PF07196 Flagellin hook IN motif 253 305 4.1E-7 T 13-09-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 PANTHER PTHR30244 2 189 2.7E-110 T 13-09-2016 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 PANTHER PTHR30244 402 492 2.7E-110 T 13-09-2016 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 PANTHER PTHR30244 298 352 2.7E-110 T 13-09-2016 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 Pfam PF00700 Bacterial flagellin C-terminal helical region 407 491 1.7E-24 T 13-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 Gene3D G3DSA:1.20.1330.10 394 448 1.2E-52 T 13-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 Gene3D G3DSA:1.20.1330.10 54 171 1.2E-52 T 13-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PMA3_RS21775 b53f8d3f1f774a9516b6edf2713ec4cd 492 SUPERFAMILY SSF64518 1 492 1.7E-97 T 13-09-2016 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 PANTHER PTHR11778 1 425 1.1E-211 T 13-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 PIRSF PIRSF001529 1 426 3.6E-180 T 13-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.4E-30 T 13-09-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 2.0E-33 T 13-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 2.0E-33 T 13-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 2.0E-33 T 13-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 2.0E-33 T 13-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 2.0E-33 T 13-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 218 402 4.4E-35 T 13-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 Gene3D G3DSA:1.10.287.40 1 104 6.9E-25 T 13-09-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 Gene3D G3DSA:3.30.930.10 105 423 1.2E-142 T 13-09-2016 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 1.2E-169 T 13-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 41.151 T 13-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 PANTHER PTHR11778:SF0 1 425 1.1E-211 T 13-09-2016 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 SUPERFAMILY SSF46589 1 112 3.71E-30 T 13-09-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PMA3_RS19555 c28699826905d0c3af6bd7b642a672b7 426 SUPERFAMILY SSF55681 116 423 6.16E-98 T 13-09-2016 PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 SUPERFAMILY SSF52317 2 189 2.59E-46 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 PANTHER PTHR11019 66 314 1.7E-80 T 13-09-2016 PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 Gene3D G3DSA:1.10.10.60 260 310 7.8E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 Gene3D G3DSA:1.10.10.60 214 259 5.3E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 Gene3D G3DSA:3.40.50.880 4 213 9.5E-54 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 Pfam PF01965 DJ-1/PfpI family 4 168 1.6E-22 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 Pfam PF12833 Helix-turn-helix domain 229 307 4.1E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 PANTHER PTHR11019:SF58 66 314 1.7E-80 T 13-09-2016 PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 SUPERFAMILY SSF46689 206 253 1.79E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 SMART SM00342 223 306 1.9E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10720 78451398a2b28012b3313d9aad4be05a 315 SUPERFAMILY SSF46689 259 310 3.27E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 PANTHER PTHR22594 373 572 2.4E-250 T 13-09-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 564 37.873 T 13-09-2016 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 SUPERFAMILY SSF55261 291 422 5.45E-43 T 13-09-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 1.7E-246 T 13-09-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 SUPERFAMILY SSF50249 2 106 9.14E-33 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 Gene3D G3DSA:2.40.50.140 1 109 1.7E-39 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 Gene3D G3DSA:3.30.1360.30 279 416 2.7E-45 T 13-09-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 Gene3D G3DSA:3.30.930.10 417 586 9.6E-115 T 13-09-2016 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 Gene3D G3DSA:3.30.930.10 134 278 9.6E-115 T 13-09-2016 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 SUPERFAMILY SSF55681 109 290 9.77E-106 T 13-09-2016 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 SUPERFAMILY SSF55681 422 585 9.77E-106 T 13-09-2016 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 Pfam PF01336 OB-fold nucleic acid binding domain 20 102 5.6E-16 T 13-09-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 1.7E-111 T 13-09-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 4.7E-27 T 13-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 4.7E-27 T 13-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 4.7E-27 T 13-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 4.7E-27 T 13-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 PANTHER PTHR22594 1 299 2.4E-250 T 13-09-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 PANTHER PTHR22594:SF5 373 572 2.4E-250 T 13-09-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 PANTHER PTHR22594:SF5 1 299 2.4E-250 T 13-09-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PMA3_RS23280 622f5728be42604b539f283033c5aad1 591 Pfam PF02938 GAD domain 310 409 5.1E-27 T 13-09-2016 IPR029351 GAD domain PMA3_RS25280 983767cab71f28a94dc64d595d793520 188 SUPERFAMILY SSF52172 16 173 1.32E-30 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS25280 983767cab71f28a94dc64d595d793520 188 Pfam PF02954 Bacterial regulatory protein, Fis family 150 183 1.9E-11 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS25280 983767cab71f28a94dc64d595d793520 188 Pfam PF00072 Response regulator receiver domain 18 126 2.9E-20 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS25280 983767cab71f28a94dc64d595d793520 188 PANTHER PTHR26402:SF344 15 126 4.8E-63 T 13-09-2016 PMA3_RS25280 983767cab71f28a94dc64d595d793520 188 SMART SM00448 15 126 8.3E-20 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS25280 983767cab71f28a94dc64d595d793520 188 Gene3D G3DSA:3.40.50.2300 16 127 8.3E-29 T 13-09-2016 PMA3_RS25280 983767cab71f28a94dc64d595d793520 188 Gene3D G3DSA:1.10.10.60 134 187 1.4E-29 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS25280 983767cab71f28a94dc64d595d793520 188 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 150 167 2.4E-7 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS25280 983767cab71f28a94dc64d595d793520 188 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 167 187 2.4E-7 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS25280 983767cab71f28a94dc64d595d793520 188 PANTHER PTHR26402 15 126 4.8E-63 T 13-09-2016 PMA3_RS27850 eb7868b26aa59bddb478110d175fc83b 172 Pfam PF08281 Sigma-70, region 4 112 163 1.6E-13 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27850 eb7868b26aa59bddb478110d175fc83b 172 Gene3D G3DSA:1.10.10.10 108 164 2.0E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27850 eb7868b26aa59bddb478110d175fc83b 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 164 1.4E-19 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27850 eb7868b26aa59bddb478110d175fc83b 172 PANTHER PTHR30173:SF9 9 163 8.1E-35 T 13-09-2016 PMA3_RS27850 eb7868b26aa59bddb478110d175fc83b 172 Gene3D G3DSA:1.10.1740.10 8 80 2.0E-12 T 13-09-2016 PMA3_RS27850 eb7868b26aa59bddb478110d175fc83b 172 SUPERFAMILY SSF88659 90 167 9.72E-13 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27850 eb7868b26aa59bddb478110d175fc83b 172 SUPERFAMILY SSF88946 5 77 7.85E-14 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27850 eb7868b26aa59bddb478110d175fc83b 172 PANTHER PTHR30173 9 163 8.1E-35 T 13-09-2016 PMA3_RS27850 eb7868b26aa59bddb478110d175fc83b 172 Pfam PF04542 Sigma-70 region 2 15 79 3.8E-13 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS03220 ca30d47774b0864d1374bac3139eb9f0 170 Pfam PF01252 Signal peptidase (SPase) II 17 159 6.4E-39 T 13-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PMA3_RS03220 ca30d47774b0864d1374bac3139eb9f0 170 PANTHER PTHR33695 7 163 2.3E-61 T 13-09-2016 PMA3_RS03220 ca30d47774b0864d1374bac3139eb9f0 170 TIGRFAM TIGR00077 lspA: signal peptidase II 11 163 1.0E-39 T 13-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PMA3_RS03220 ca30d47774b0864d1374bac3139eb9f0 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 165 17.473 T 13-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PMA3_RS03220 ca30d47774b0864d1374bac3139eb9f0 170 ProSitePatterns PS00855 Signal peptidases II signature. 106 118 - T 13-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PMA3_RS03220 ca30d47774b0864d1374bac3139eb9f0 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 55 63 7.4E-19 T 13-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PMA3_RS03220 ca30d47774b0864d1374bac3139eb9f0 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 140 156 7.4E-19 T 13-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PMA3_RS03220 ca30d47774b0864d1374bac3139eb9f0 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 103 118 7.4E-19 T 13-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PMA3_RS03220 ca30d47774b0864d1374bac3139eb9f0 170 PANTHER PTHR33695:SF1 7 163 2.3E-61 T 13-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PMA3_RS02285 6a1667116c12aa3af0c5124880d79040 166 SMART SM00988 1 65 2.2E-24 T 13-09-2016 IPR004029 UreE urease accessory, N-terminal PMA3_RS02285 6a1667116c12aa3af0c5124880d79040 166 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 149 2.3E-27 T 13-09-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 PMA3_RS02285 6a1667116c12aa3af0c5124880d79040 166 SUPERFAMILY SSF69737 72 138 3.4E-21 T 13-09-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 PMA3_RS02285 6a1667116c12aa3af0c5124880d79040 166 Gene3D G3DSA:2.60.260.20 1 69 2.7E-15 T 13-09-2016 PMA3_RS02285 6a1667116c12aa3af0c5124880d79040 166 PIRSF PIRSF036402 2 150 6.0E-49 T 13-09-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 PMA3_RS02285 6a1667116c12aa3af0c5124880d79040 166 Gene3D G3DSA:3.30.70.790 72 143 7.9E-33 T 13-09-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 PMA3_RS02285 6a1667116c12aa3af0c5124880d79040 166 Pfam PF02814 UreE urease accessory protein, N-terminal domain 7 65 9.1E-20 T 13-09-2016 IPR004029 UreE urease accessory, N-terminal PMA3_RS02285 6a1667116c12aa3af0c5124880d79040 166 SUPERFAMILY SSF69287 1 70 4.32E-18 T 13-09-2016 IPR004029 UreE urease accessory, N-terminal PMA3_RS02285 6a1667116c12aa3af0c5124880d79040 166 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 139 23.009 T 13-09-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 Pfam PF03466 LysR substrate binding domain 88 288 1.2E-27 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 PANTHER PTHR30293:SF0 1 287 1.1E-91 T 13-09-2016 PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 SUPERFAMILY SSF46785 1 86 1.26E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 PANTHER PTHR30293 1 287 1.1E-91 T 13-09-2016 PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 Gene3D G3DSA:1.10.10.10 1 84 3.4E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 Gene3D G3DSA:3.40.190.10 89 192 2.7E-14 T 13-09-2016 PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 SUPERFAMILY SSF53850 89 286 6.29E-28 T 13-09-2016 PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 5.0E-15 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00880 8fc955758c2037faa072340c7c27c864 295 Gene3D G3DSA:3.40.190.10 193 259 4.9E-9 T 13-09-2016 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 PANTHER PTHR10799 265 418 1.6E-80 T 13-09-2016 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 PANTHER PTHR10799 856 875 1.6E-80 T 13-09-2016 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 PANTHER PTHR10799 500 717 1.6E-80 T 13-09-2016 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 465 626 1.0E-33 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 SMART SM00091 344 410 8.6E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 SMART SM00091 24 87 56.0 T 13-09-2016 IPR000014 PAS domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 Pfam PF00990 Diguanylate cyclase, GGDEF domain 469 622 3.2E-39 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 PANTHER PTHR10799:SF710 265 418 1.6E-80 T 13-09-2016 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 SMART SM00065 192 341 7.0E-5 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 Pfam PF13426 PAS domain 355 457 8.5E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 PANTHER PTHR10799:SF710 500 717 1.6E-80 T 13-09-2016 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 Gene3D G3DSA:3.30.70.270 470 634 2.1E-48 T 13-09-2016 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 Pfam PF01590 GAF domain 192 331 5.5E-12 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 SUPERFAMILY SSF55785 350 456 1.61E-17 T 13-09-2016 IPR000014 PAS domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 SMART SM00086 416 458 7.7E-4 T 13-09-2016 IPR001610 PAC motif PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 345 464 6.3E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 SMART SM00267 458 627 1.3E-53 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 Gene3D G3DSA:3.30.450.40 169 338 1.3E-17 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 Gene3D G3DSA:3.30.450.20 345 456 5.9E-17 T 13-09-2016 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 SUPERFAMILY SSF55781 192 338 1.61E-20 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 SUPERFAMILY SSF141868 642 891 2.48E-90 T 13-09-2016 IPR001633 EAL domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 SMART SM00052 637 883 2.7E-112 T 13-09-2016 IPR001633 EAL domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 PANTHER PTHR10799:SF710 856 875 1.6E-80 T 13-09-2016 PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 Gene3D G3DSA:3.20.20.450 641 890 9.7E-99 T 13-09-2016 IPR001633 EAL domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 Pfam PF00563 EAL domain 643 878 1.6E-74 T 13-09-2016 IPR001633 EAL domain PMA3_RS01755 b29b9cbf224cf74dbb01451e1cd761d2 897 SUPERFAMILY SSF55073 474 628 2.43E-42 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 Gene3D G3DSA:1.10.10.10 2 89 3.5E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 Gene3D G3DSA:3.40.190.10 184 269 8.9E-23 T 13-09-2016 PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 Pfam PF03466 LysR substrate binding domain 99 299 8.3E-18 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 PANTHER PTHR30118 1 297 6.5E-92 T 13-09-2016 PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 SUPERFAMILY SSF46785 7 89 1.36E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 Gene3D G3DSA:3.40.190.10 274 300 7.2E-21 T 13-09-2016 PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 Gene3D G3DSA:3.40.190.10 93 176 7.2E-21 T 13-09-2016 PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 SUPERFAMILY SSF53850 93 297 2.71E-30 T 13-09-2016 PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 6.5E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 6.5E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 6.5E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 2.5E-13 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10775 301e6fd28126c2e935656f6d218a0875 306 PANTHER PTHR30118:SF8 1 297 6.5E-92 T 13-09-2016 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 Pfam PF00158 Sigma-54 interaction domain 139 304 3.9E-66 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 PANTHER PTHR32071:SF28 6 448 1.9E-261 T 13-09-2016 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 SUPERFAMILY SSF52540 139 380 2.11E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 5.6E-11 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 5.6E-11 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 PANTHER PTHR32071 6 448 1.9E-261 T 13-09-2016 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 Gene3D G3DSA:1.10.10.60 400 444 1.3E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 SUPERFAMILY SSF46689 352 448 7.17E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 Pfam PF00072 Response regulator receiver domain 9 118 1.6E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 Gene3D G3DSA:3.40.50.2300 5 125 2.2E-35 T 13-09-2016 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 Pfam PF02954 Bacterial regulatory protein, Fis family 405 445 8.6E-15 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 SUPERFAMILY SSF52172 7 181 6.69E-42 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 SMART SM00448 7 118 5.0E-33 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 Gene3D G3DSA:1.10.8.60 311 380 1.9E-22 T 13-09-2016 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 Gene3D G3DSA:3.40.50.300 136 310 5.8E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 SMART SM00382 158 301 7.1E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS03275 87011d5d712674f20aeb890bb734dce6 448 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS05875 0646397c86409a681368dcbb3b3a9293 200 Pfam PF06930 Protein of unknown function (DUF1282) 8 180 1.6E-54 T 13-09-2016 IPR009698 Protein of unknown function DUF1282 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 286 3.0E-143 T 13-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 PANTHER PTHR11117 1 287 1.1E-193 T 13-09-2016 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 SMART SM00881 4 100 4.0E-36 T 13-09-2016 IPR003781 CoA-binding GO:0048037 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 PIRSF PIRSF001553 1 290 3.2E-132 T 13-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 SUPERFAMILY SSF51735 1 122 5.01E-42 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 13-09-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 13-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 Pfam PF02629 CoA binding domain 6 99 1.3E-31 T 13-09-2016 IPR003781 CoA-binding GO:0048037 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 SUPERFAMILY SSF52210 123 287 3.27E-57 T 13-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 Pfam PF00549 CoA-ligase 151 270 3.1E-21 T 13-09-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.1E-38 T 13-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 3.1E-38 T 13-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 3.1E-38 T 13-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 3.1E-38 T 13-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 Gene3D G3DSA:3.40.50.720 2 119 3.6E-54 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS21240 cacd6a89637a812245a3c9b873fe7306 293 Gene3D G3DSA:3.40.50.261 120 287 5.1E-77 T 13-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 Gene3D G3DSA:3.80.10.10 79 222 9.5E-26 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 Gene3D G3DSA:3.80.10.10 688 846 1.8E-24 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 Gene3D G3DSA:1.20.58.360 996 1146 2.1E-26 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00369 826 848 28.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00369 133 155 75.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00369 502 524 230.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00369 207 227 210.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00369 407 430 22.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00369 478 501 44.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00369 181 203 39.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00369 159 180 130.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00369 730 753 0.048 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00364 825 844 0.74 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00364 781 799 310.0 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00364 732 749 38.0 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00364 204 223 70.0 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00364 159 178 310.0 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SMART SM00364 407 426 610.0 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 Pfam PF00560 Leucine Rich Repeat 732 749 1.4 T 13-09-2016 IPR001611 Leucine-rich repeat GO:0005515 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 Pfam PF00560 Leucine Rich Repeat 161 173 1.4 T 13-09-2016 IPR001611 Leucine-rich repeat GO:0005515 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SUPERFAMILY SSF52058 688 846 7.18E-23 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SUPERFAMILY SSF52058 63 227 3.63E-46 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 SUPERFAMILY SSF52058 384 521 3.63E-46 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 Gene3D G3DSA:3.80.10.10 383 524 6.6E-22 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 PANTHER PTHR24365 105 219 9.3E-39 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 PANTHER PTHR24365 369 516 9.3E-39 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 PANTHER PTHR24365 696 850 9.3E-39 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 PANTHER PTHR24365 1203 1212 9.3E-39 T 13-09-2016 PMA3_RS02150 69bc49c886e7ab658cc045e39251ac23 1232 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 922 1149 4.0E-38 T 13-09-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- PMA3_RS07470 0f074a714755813027d696ef7f72b38e 431 Pfam PF01494 FAD binding domain 2 88 2.9E-6 T 13-09-2016 IPR002938 FAD-binding domain GO:0071949 PMA3_RS07470 0f074a714755813027d696ef7f72b38e 431 Gene3D G3DSA:3.50.50.60 2 154 6.6E-17 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS07470 0f074a714755813027d696ef7f72b38e 431 Gene3D G3DSA:3.50.50.60 241 310 6.6E-17 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS07470 0f074a714755813027d696ef7f72b38e 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 1.6E-6 T 13-09-2016 PMA3_RS07470 0f074a714755813027d696ef7f72b38e 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 253 268 1.6E-6 T 13-09-2016 PMA3_RS07470 0f074a714755813027d696ef7f72b38e 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 268 284 1.6E-6 T 13-09-2016 PMA3_RS07470 0f074a714755813027d696ef7f72b38e 431 SUPERFAMILY SSF51905 240 335 6.74E-25 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS07470 0f074a714755813027d696ef7f72b38e 431 SUPERFAMILY SSF51905 3 149 6.74E-25 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18915 02c40965c3222cef6dc28b810d238b80 721 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 521 709 8.8E-40 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS18915 02c40965c3222cef6dc28b810d238b80 721 SMART SM00283 473 710 8.1E-43 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS18915 02c40965c3222cef6dc28b810d238b80 721 SUPERFAMILY SSF58104 417 708 1.92E-57 T 13-09-2016 PMA3_RS18915 02c40965c3222cef6dc28b810d238b80 721 PANTHER PTHR32089 366 713 5.4E-68 T 13-09-2016 PMA3_RS18915 02c40965c3222cef6dc28b810d238b80 721 SMART SM00304 388 444 9.7E-5 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS18915 02c40965c3222cef6dc28b810d238b80 721 Gene3D G3DSA:1.10.287.950 476 684 3.3E-46 T 13-09-2016 PMA3_RS22115 f9f636228677c2fd18fbbc658251e805 517 Gene3D G3DSA:2.30.38.10 326 399 3.2E-17 T 13-09-2016 PMA3_RS22115 f9f636228677c2fd18fbbc658251e805 517 Gene3D G3DSA:3.40.50.980 7 158 3.8E-31 T 13-09-2016 PMA3_RS22115 f9f636228677c2fd18fbbc658251e805 517 Gene3D G3DSA:3.30.300.30 412 507 1.4E-11 T 13-09-2016 PMA3_RS22115 f9f636228677c2fd18fbbc658251e805 517 SUPERFAMILY SSF56801 8 510 7.72E-97 T 13-09-2016 PMA3_RS22115 f9f636228677c2fd18fbbc658251e805 517 PANTHER PTHR24095 9 498 1.8E-90 T 13-09-2016 PMA3_RS22115 f9f636228677c2fd18fbbc658251e805 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 151 162 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS22115 f9f636228677c2fd18fbbc658251e805 517 Pfam PF00501 AMP-binding enzyme 18 414 7.9E-61 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS22115 f9f636228677c2fd18fbbc658251e805 517 Gene3D G3DSA:3.40.50.980 159 314 1.6E-30 T 13-09-2016 PMA3_RS11060 a25c46d95c9de048f2defc22d58b5f70 192 SUPERFAMILY SSF103025 13 191 8.44E-15 T 13-09-2016 PMA3_RS11060 a25c46d95c9de048f2defc22d58b5f70 192 Gene3D G3DSA:3.30.1360.120 109 190 8.3E-5 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS11060 a25c46d95c9de048f2defc22d58b5f70 192 Pfam PF04268 Sarcosine oxidase, gamma subunit family 44 187 5.0E-7 T 13-09-2016 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PMA3_RS27215 3c6ce58f4531a6428ae8600d51e6bb22 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-09-2016 IPR019972 Ribosomal protein L14P, conserved site PMA3_RS27215 3c6ce58f4531a6428ae8600d51e6bb22 122 Gene3D G3DSA:2.40.150.20 1 122 1.5E-55 T 13-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PMA3_RS27215 3c6ce58f4531a6428ae8600d51e6bb22 122 SUPERFAMILY SSF50193 1 122 5.76E-52 T 13-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PMA3_RS27215 3c6ce58f4531a6428ae8600d51e6bb22 122 SMART SM01374 1 122 5.2E-86 T 13-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PMA3_RS27215 3c6ce58f4531a6428ae8600d51e6bb22 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.9E-58 T 13-09-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 PMA3_RS27215 3c6ce58f4531a6428ae8600d51e6bb22 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 8.0E-55 T 13-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PMA3_RS27215 3c6ce58f4531a6428ae8600d51e6bb22 122 PANTHER PTHR11761 1 122 3.1E-78 T 13-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PMA3_RS27215 3c6ce58f4531a6428ae8600d51e6bb22 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.131 T 13-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 SUPERFAMILY SSF51215 35 145 3.01E-18 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 Pfam PF02311 AraC-like ligand binding domain 33 141 1.2E-17 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 SMART SM00342 194 276 1.3E-25 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 1.5E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 1.5E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 PANTHER PTHR11019 37 276 9.8E-43 T 13-09-2016 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 SUPERFAMILY SSF46689 177 227 3.4E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 Gene3D G3DSA:2.60.120.280 37 159 5.2E-14 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 SUPERFAMILY SSF46689 230 276 1.43E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 Gene3D G3DSA:1.10.10.60 232 276 1.1E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 Pfam PF12833 Helix-turn-helix domain 202 276 7.9E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 Gene3D G3DSA:1.10.10.60 179 231 4.4E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 272 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 179 223 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS15460 ad8009512c0d6239fb31333df9b27528 277 PANTHER PTHR11019:SF75 37 276 9.8E-43 T 13-09-2016 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 Gene3D G3DSA:1.10.274.10 306 399 1.5E-23 T 13-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 Pfam PF00381 PTS HPr component phosphorylation site 172 251 1.1E-25 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 SUPERFAMILY SSF55594 171 256 5.36E-25 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 Gene3D G3DSA:3.30.1340.10 172 256 1.6E-29 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 SUPERFAMILY SSF51621 516 810 1.6E-94 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 Gene3D G3DSA:2.70.70.10 7 152 8.6E-48 T 13-09-2016 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 71 83 - T 13-09-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 SUPERFAMILY SSF51261 5 151 5.41E-45 T 13-09-2016 IPR011055 Duplicated hybrid motif PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 182 189 - T 13-09-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 Gene3D G3DSA:3.50.30.10 400 517 1.3E-31 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 PANTHER PTHR22931:SF15 327 811 4.9E-200 T 13-09-2016 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 708 726 - T 13-09-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 Gene3D G3DSA:3.20.20.60 522 828 4.7E-98 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 276 824 1.7E-150 T 13-09-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 708 723 4.0E-20 T 13-09-2016 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 761 773 4.0E-20 T 13-09-2016 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 558 577 4.0E-20 T 13-09-2016 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 725 740 4.0E-20 T 13-09-2016 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 PRINTS PR00107 Phosphocarrier protein signature 207 222 2.4E-11 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 PRINTS PR00107 Phosphocarrier protein signature 222 239 2.4E-11 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 PRINTS PR00107 Phosphocarrier protein signature 182 198 2.4E-11 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 172 250 6.0E-23 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 SUPERFAMILY SSF52009 391 505 1.23E-28 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 522 802 1.8E-99 T 13-09-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 Pfam PF00391 PEP-utilising enzyme, mobile domain 417 490 2.6E-19 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 8 129 6.6E-41 T 13-09-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 9 127 2.2E-38 T 13-09-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 PANTHER PTHR22931 327 811 4.9E-200 T 13-09-2016 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 SUPERFAMILY SSF47831 305 409 4.58E-23 T 13-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PMA3_RS24110 aaeea07f45603b1cb3d33c1093c07ebc 842 Pfam PF05524 PEP-utilising enzyme, N-terminal 276 392 1.8E-21 T 13-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PMA3_RS28055 35d123f87a401b21fe1c4a54339b1ee6 314 Gene3D G3DSA:3.40.190.100 118 238 7.9E-22 T 13-09-2016 PMA3_RS28055 35d123f87a401b21fe1c4a54339b1ee6 314 SUPERFAMILY SSF53850 25 301 3.53E-72 T 13-09-2016 PMA3_RS28055 35d123f87a401b21fe1c4a54339b1ee6 314 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 32 284 9.1E-52 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS28055 35d123f87a401b21fe1c4a54339b1ee6 314 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 23 310 3.8E-130 T 13-09-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 PMA3_RS28055 35d123f87a401b21fe1c4a54339b1ee6 314 PANTHER PTHR30177 20 289 2.8E-114 T 13-09-2016 PMA3_RS28055 35d123f87a401b21fe1c4a54339b1ee6 314 PANTHER PTHR30177:SF6 20 289 2.8E-114 T 13-09-2016 PMA3_RS28055 35d123f87a401b21fe1c4a54339b1ee6 314 Gene3D G3DSA:3.40.190.10 239 301 3.8E-26 T 13-09-2016 PMA3_RS28055 35d123f87a401b21fe1c4a54339b1ee6 314 Gene3D G3DSA:3.40.190.10 25 113 3.8E-26 T 13-09-2016 PMA3_RS18325 26ad872379947cf2b76d4ee3cc038c38 274 Gene3D G3DSA:3.20.20.60 4 226 2.6E-67 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS18325 26ad872379947cf2b76d4ee3cc038c38 274 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 214 3.2E-28 T 13-09-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PMA3_RS18325 26ad872379947cf2b76d4ee3cc038c38 274 SUPERFAMILY SSF51621 4 226 6.98E-58 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS18325 26ad872379947cf2b76d4ee3cc038c38 274 PANTHER PTHR32308 7 272 7.0E-73 T 13-09-2016 IPR011206 Citrate lyase beta subunit-like PMA3_RS18325 26ad872379947cf2b76d4ee3cc038c38 274 PANTHER PTHR32308:SF0 7 272 7.0E-73 T 13-09-2016 PMA3_RS18325 26ad872379947cf2b76d4ee3cc038c38 274 PIRSF PIRSF015582 1 274 5.0E-76 T 13-09-2016 IPR011206 Citrate lyase beta subunit-like PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 SUPERFAMILY SSF53067 9 253 4.15E-95 T 13-09-2016 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 8 494 5.7E-225 T 13-09-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 Gene3D G3DSA:3.30.420.40 6 251 4.9E-106 T 13-09-2016 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 Gene3D G3DSA:3.30.420.40 252 494 1.4E-103 T 13-09-2016 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 Hamap MF_00186 Glycerol kinase [glpK]. 7 495 58.526 T 13-09-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 SUPERFAMILY SSF53067 252 495 5.3E-87 T 13-09-2016 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 PANTHER PTHR10196 1 501 3.3E-261 T 13-09-2016 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 360 380 - T 13-09-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 139 151 - T 13-09-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 449 1.6E-64 T 13-09-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 PIRSF PIRSF000538 7 500 3.5E-179 T 13-09-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 250 2.8E-84 T 13-09-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PMA3_RS23825 1e1a71f6184afa88a760d9982e000068 501 PANTHER PTHR10196:SF9 1 501 3.3E-261 T 13-09-2016 PMA3_RS28350 fb49182da3b9114aa2db2633c3f1723f 267 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 267 3.1E-95 T 13-09-2016 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal GO:0016874 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS28350 fb49182da3b9114aa2db2633c3f1723f 267 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 8 267 1.4E-97 T 13-09-2016 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 PMA3_RS28350 fb49182da3b9114aa2db2633c3f1723f 267 Gene3D G3DSA:3.90.226.10 79 188 5.9E-11 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS28350 fb49182da3b9114aa2db2633c3f1723f 267 SUPERFAMILY SSF52096 20 197 4.23E-17 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS29415 7cc3bbfb2ded91e17c5945e6a3774ab6 117 Gene3D G3DSA:3.30.1330.40 11 116 5.3E-26 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS29415 7cc3bbfb2ded91e17c5945e6a3774ab6 117 SUPERFAMILY SSF55298 11 117 3.46E-31 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS29415 7cc3bbfb2ded91e17c5945e6a3774ab6 117 PANTHER PTHR11803 11 117 1.4E-34 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS29415 7cc3bbfb2ded91e17c5945e6a3774ab6 117 Pfam PF01042 Endoribonuclease L-PSP 10 115 6.9E-22 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS24835 a51a06bbdee7f5882928c0ad3a7753c3 262 Gene3D G3DSA:3.30.450.40 83 259 2.4E-42 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS24835 a51a06bbdee7f5882928c0ad3a7753c3 262 PANTHER PTHR30136 3 257 2.5E-117 T 13-09-2016 PMA3_RS24835 a51a06bbdee7f5882928c0ad3a7753c3 262 SUPERFAMILY SSF46785 11 85 9.89E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24835 a51a06bbdee7f5882928c0ad3a7753c3 262 Pfam PF09339 IclR helix-turn-helix domain 13 63 4.5E-12 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS24835 a51a06bbdee7f5882928c0ad3a7753c3 262 PANTHER PTHR30136:SF8 3 257 2.5E-117 T 13-09-2016 PMA3_RS24835 a51a06bbdee7f5882928c0ad3a7753c3 262 SUPERFAMILY SSF55781 77 256 4.84E-36 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS24835 a51a06bbdee7f5882928c0ad3a7753c3 262 SMART SM00346 11 101 4.5E-16 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS24835 a51a06bbdee7f5882928c0ad3a7753c3 262 Gene3D G3DSA:1.10.10.10 9 82 5.9E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24835 a51a06bbdee7f5882928c0ad3a7753c3 262 Pfam PF01614 Bacterial transcriptional regulator 129 251 4.8E-13 T 13-09-2016 IPR014757 Transcription regulator IclR, C-terminal PMA3_RS02145 178c5f30643bbc3d9d660c1ad9ca7e3a 464 Pfam PF03796 DnaB-like helicase C terminal domain 197 453 4.0E-116 T 13-09-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 PMA3_RS02145 178c5f30643bbc3d9d660c1ad9ca7e3a 464 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 455 4.9E-174 T 13-09-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 PMA3_RS02145 178c5f30643bbc3d9d660c1ad9ca7e3a 464 SUPERFAMILY SSF48024 18 129 2.22E-39 T 13-09-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PMA3_RS02145 178c5f30643bbc3d9d660c1ad9ca7e3a 464 Pfam PF00772 DnaB-like helicase N terminal domain 20 120 2.9E-36 T 13-09-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PMA3_RS02145 178c5f30643bbc3d9d660c1ad9ca7e3a 464 Gene3D G3DSA:1.10.860.10 20 120 3.3E-39 T 13-09-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PMA3_RS02145 178c5f30643bbc3d9d660c1ad9ca7e3a 464 PANTHER PTHR30153 4 463 1.4E-219 T 13-09-2016 PMA3_RS02145 178c5f30643bbc3d9d660c1ad9ca7e3a 464 SUPERFAMILY SSF52540 195 446 1.35E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02145 178c5f30643bbc3d9d660c1ad9ca7e3a 464 Gene3D G3DSA:3.40.50.300 182 455 2.5E-107 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 SUPERFAMILY SSF58104 244 521 9.59E-74 T 13-09-2016 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 Pfam PF08447 PAS fold 31 110 7.7E-14 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 SUPERFAMILY SSF55785 21 114 4.35E-25 T 13-09-2016 IPR000014 PAS domain PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 PANTHER PTHR32089 44 521 7.6E-152 T 13-09-2016 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 PANTHER PTHR32089:SF64 44 521 7.6E-152 T 13-09-2016 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 Gene3D G3DSA:1.10.287.950 274 491 1.6E-60 T 13-09-2016 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 519 1.5E-50 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 SMART SM00283 259 520 6.4E-78 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 Gene3D G3DSA:3.30.450.20 20 112 5.0E-22 T 13-09-2016 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 279 308 8.8E-22 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 8.8E-22 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 8.8E-22 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS08360 4aa3a21451dc1075f526b6e609bb7e7a 521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 109 8.6E-12 T 13-09-2016 IPR000014 PAS domain PMA3_RS14785 f60affb0d3e75b7044f9802e05109e87 322 Gene3D G3DSA:3.40.190.10 116 210 1.2E-9 T 13-09-2016 PMA3_RS14785 f60affb0d3e75b7044f9802e05109e87 322 Pfam PF03466 LysR substrate binding domain 130 313 3.4E-18 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS14785 f60affb0d3e75b7044f9802e05109e87 322 SUPERFAMILY SSF46785 26 112 2.83E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14785 f60affb0d3e75b7044f9802e05109e87 322 Gene3D G3DSA:1.10.10.10 26 107 4.6E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14785 f60affb0d3e75b7044f9802e05109e87 322 SUPERFAMILY SSF53850 130 318 8.51E-20 T 13-09-2016 PMA3_RS14785 f60affb0d3e75b7044f9802e05109e87 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 29 86 1.6E-13 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14785 f60affb0d3e75b7044f9802e05109e87 322 PANTHER PTHR30126 26 313 1.6E-63 T 13-09-2016 PMA3_RS14785 f60affb0d3e75b7044f9802e05109e87 322 PANTHER PTHR30126:SF16 26 313 1.6E-63 T 13-09-2016 PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 SMART SM00344 4 114 1.5E-43 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 8.5E-19 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 8.5E-19 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 8.5E-19 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 Pfam PF01037 Lrp/AsnC ligand binding domain 70 145 1.0E-23 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 SUPERFAMILY SSF46785 3 93 9.57E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 PANTHER PTHR30154 1 158 1.6E-99 T 13-09-2016 PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 13-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 PANTHER PTHR30154:SF19 1 158 1.6E-99 T 13-09-2016 PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 Gene3D G3DSA:3.30.70.920 57 142 3.7E-29 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 SUPERFAMILY SSF54909 64 154 3.22E-21 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 5.7E-22 T 13-09-2016 PMA3_RS02770 6fa6e1444929c1332e02b5de6c08ce7c 159 Gene3D G3DSA:1.10.10.10 5 56 3.2E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 5.1E-72 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 3 447 2.2E-188 T 13-09-2016 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PANTHER PTHR22912:SF106 1 450 3.0E-217 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 Gene3D G3DSA:3.50.50.60 3 133 1.0E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 446 6.0E-37 T 13-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 SUPERFAMILY SSF55424 335 447 5.67E-38 T 13-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 13-09-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 Gene3D G3DSA:3.50.50.60 134 325 1.3E-56 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PIRSF PIRSF000350 1 444 2.1E-89 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 SUPERFAMILY SSF51905 1 363 6.59E-62 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 Gene3D G3DSA:3.30.390.30 338 450 2.1E-44 T 13-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.4E-70 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 2.4E-70 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 2.4E-70 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.4E-70 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 2.4E-70 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 2.4E-70 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 2.4E-70 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 2.4E-70 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.4E-70 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 9.9E-29 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 9.9E-29 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 9.9E-29 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.9E-29 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 9.9E-29 T 13-09-2016 PMA3_RS15945 4b127216661884ad4650520dbd51e129 452 PANTHER PTHR22912 1 450 3.0E-217 T 13-09-2016 PMA3_RS25190 7f79febedb90f932db8936df1774ee54 198 PIRSF PIRSF006305 1 193 3.1E-47 T 13-09-2016 IPR003697 Maf-like protein GO:0005737 PMA3_RS25190 7f79febedb90f932db8936df1774ee54 198 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 1.5E-52 T 13-09-2016 IPR003697 Maf-like protein GO:0005737 PMA3_RS25190 7f79febedb90f932db8936df1774ee54 198 SUPERFAMILY SSF52972 2 185 1.37E-60 T 13-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PMA3_RS25190 7f79febedb90f932db8936df1774ee54 198 Gene3D G3DSA:3.90.950.10 2 189 3.8E-67 T 13-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PMA3_RS25190 7f79febedb90f932db8936df1774ee54 198 PANTHER PTHR11746 126 184 3.3E-12 T 13-09-2016 PMA3_RS25190 7f79febedb90f932db8936df1774ee54 198 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 32.708 T 13-09-2016 IPR003697 Maf-like protein GO:0005737 PMA3_RS25190 7f79febedb90f932db8936df1774ee54 198 Pfam PF02545 Maf-like protein 3 185 1.5E-54 T 13-09-2016 IPR003697 Maf-like protein GO:0005737 PMA3_RS06110 482d57c176495cf0ab911f9bd05620c1 332 SUPERFAMILY SSF53850 93 304 9.95E-42 T 13-09-2016 PMA3_RS06110 482d57c176495cf0ab911f9bd05620c1 332 Gene3D G3DSA:3.40.190.10 99 182 2.8E-23 T 13-09-2016 PMA3_RS06110 482d57c176495cf0ab911f9bd05620c1 332 Gene3D G3DSA:3.40.190.10 183 266 2.5E-18 T 13-09-2016 PMA3_RS06110 482d57c176495cf0ab911f9bd05620c1 332 SUPERFAMILY SSF46785 11 118 1.82E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06110 482d57c176495cf0ab911f9bd05620c1 332 Gene3D G3DSA:1.10.10.10 11 86 1.8E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06110 482d57c176495cf0ab911f9bd05620c1 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 7.4E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS06110 482d57c176495cf0ab911f9bd05620c1 332 Pfam PF03466 LysR substrate binding domain 95 299 5.0E-40 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS06110 482d57c176495cf0ab911f9bd05620c1 332 PANTHER PTHR30537:SF5 2 318 5.2E-105 T 13-09-2016 PMA3_RS06110 482d57c176495cf0ab911f9bd05620c1 332 PANTHER PTHR30537 2 318 5.2E-105 T 13-09-2016 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PANTHER PTHR30222:SF11 8 360 1.6E-166 T 13-09-2016 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PIRSF PIRSF019574 4 362 1.9E-124 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PANTHER PTHR30222 8 360 1.6E-166 T 13-09-2016 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 Pfam PF13416 Bacterial extracellular solute-binding protein 41 324 1.8E-29 T 13-09-2016 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 Gene3D G3DSA:3.40.190.10 34 134 2.3E-12 T 13-09-2016 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 87 100 3.2E-53 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 3.2E-53 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 306 332 3.2E-53 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 71 85 3.2E-53 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 3.2E-53 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 261 280 3.2E-53 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 28 44 3.2E-53 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 65 3.2E-53 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 211 230 3.2E-53 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 Gene3D G3DSA:3.40.190.10 135 310 1.1E-62 T 13-09-2016 PMA3_RS17195 95aa5d61d594c564d04df9bc440d5227 362 SUPERFAMILY SSF53850 22 360 6.92E-90 T 13-09-2016 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 282 49.22 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 8.7E-62 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 8.7E-62 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 8.7E-62 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 8.7E-62 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 8.7E-62 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 8.7E-62 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 PIRSF PIRSF036480 1 282 6.1E-121 T 13-09-2016 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 SUPERFAMILY SSF55021 3 84 3.83E-17 T 13-09-2016 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 282 2.0E-109 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 Pfam PF00551 Formyl transferase 87 262 2.3E-39 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 PANTHER PTHR10520 1 276 4.3E-144 T 13-09-2016 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 PANTHER PTHR10520:SF7 1 276 4.3E-144 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 Gene3D G3DSA:3.40.50.170 87 281 1.1E-57 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 SUPERFAMILY SSF53328 87 282 3.53E-62 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS23395 83e3206c45b258aa4216d89c37a3e244 282 Gene3D G3DSA:3.30.70.260 1 82 1.2E-22 T 13-09-2016 PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 SUPERFAMILY SSF46785 12 96 2.34E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 SUPERFAMILY SSF53850 105 318 1.63E-25 T 13-09-2016 PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 1.0E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 1.0E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 1.0E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 Gene3D G3DSA:3.40.190.10 191 284 2.4E-11 T 13-09-2016 PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 75 3.1E-21 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 PANTHER PTHR30537 9 318 1.9E-67 T 13-09-2016 PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 Gene3D G3DSA:3.40.190.10 105 190 4.3E-20 T 13-09-2016 PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 PANTHER PTHR30537:SF26 9 318 1.9E-67 T 13-09-2016 PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 Pfam PF03466 LysR substrate binding domain 103 315 2.3E-22 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS10250 dcfbce4f54b386938c65bc4fd6349279 329 Gene3D G3DSA:1.10.10.10 16 98 9.1E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14550 6abf9935bb943d4be7a2b0fb8643d0a5 295 PANTHER PTHR30537:SF5 1 294 5.8E-89 T 13-09-2016 PMA3_RS14550 6abf9935bb943d4be7a2b0fb8643d0a5 295 Gene3D G3DSA:3.40.190.10 176 257 2.7E-15 T 13-09-2016 PMA3_RS14550 6abf9935bb943d4be7a2b0fb8643d0a5 295 SUPERFAMILY SSF46785 4 111 5.99E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14550 6abf9935bb943d4be7a2b0fb8643d0a5 295 SUPERFAMILY SSF53850 89 293 2.33E-40 T 13-09-2016 PMA3_RS14550 6abf9935bb943d4be7a2b0fb8643d0a5 295 Gene3D G3DSA:1.10.10.10 5 82 5.5E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14550 6abf9935bb943d4be7a2b0fb8643d0a5 295 Pfam PF03466 LysR substrate binding domain 89 290 6.8E-38 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS14550 6abf9935bb943d4be7a2b0fb8643d0a5 295 PANTHER PTHR30537 1 294 5.8E-89 T 13-09-2016 PMA3_RS14550 6abf9935bb943d4be7a2b0fb8643d0a5 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.5E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14550 6abf9935bb943d4be7a2b0fb8643d0a5 295 Gene3D G3DSA:3.40.190.10 92 175 3.4E-20 T 13-09-2016 PMA3_RS00540 2d30ee143f21aa3c5ccb04ed6fe9141f 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS00540 2d30ee143f21aa3c5ccb04ed6fe9141f 425 Gene3D G3DSA:3.40.640.10 61 303 1.2E-79 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS00540 2d30ee143f21aa3c5ccb04ed6fe9141f 425 PANTHER PTHR11986 7 425 1.5E-288 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS00540 2d30ee143f21aa3c5ccb04ed6fe9141f 425 SUPERFAMILY SSF53383 22 424 1.13E-133 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS00540 2d30ee143f21aa3c5ccb04ed6fe9141f 425 Gene3D G3DSA:3.90.1150.10 304 424 2.5E-42 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS00540 2d30ee143f21aa3c5ccb04ed6fe9141f 425 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 10 422 8.0E-162 T 13-09-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 PMA3_RS00540 2d30ee143f21aa3c5ccb04ed6fe9141f 425 PANTHER PTHR11986:SF70 7 425 1.5E-288 T 13-09-2016 PMA3_RS00540 2d30ee143f21aa3c5ccb04ed6fe9141f 425 Pfam PF00202 Aminotransferase class-III 18 421 1.9E-130 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 4 430 37.844 T 13-09-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 PANTHER PTHR11958 7 431 4.2E-252 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 Pfam PF00375 Sodium:dicarboxylate symporter family 11 403 5.1E-114 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 SUPERFAMILY SSF118215 11 403 1.09E-120 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 Gene3D G3DSA:1.10.3860.10 8 408 2.4E-120 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 PANTHER PTHR11958:SF49 7 431 4.2E-252 T 13-09-2016 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 2.0E-36 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 2.0E-36 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 2.0E-36 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 2.0E-36 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 2.0E-36 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 2.0E-36 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS05860 210f642c1df2f090140c11802bbeaf39 444 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 2.0E-36 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10640 417482193dd0f67156e33d7a044f0b14 307 Pfam PF13557 Putative MetA-pathway of phenol degradation 70 303 1.3E-35 T 13-09-2016 IPR025737 MetA-pathway of phenol degradation, putative PMA3_RS05975 e9fcc8dc7c0c6c2abfd841b70c72fa4e 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 13-09-2016 IPR018201 Beta-ketoacyl synthase, active site PMA3_RS05975 e9fcc8dc7c0c6c2abfd841b70c72fa4e 406 PANTHER PTHR11712 1 403 4.2E-153 T 13-09-2016 PMA3_RS05975 e9fcc8dc7c0c6c2abfd841b70c72fa4e 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.1E-44 T 13-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PMA3_RS05975 e9fcc8dc7c0c6c2abfd841b70c72fa4e 406 Gene3D G3DSA:3.40.47.10 261 404 2.0E-47 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS05975 e9fcc8dc7c0c6c2abfd841b70c72fa4e 406 SUPERFAMILY SSF53901 1 251 2.66E-60 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS05975 e9fcc8dc7c0c6c2abfd841b70c72fa4e 406 SMART SM00825 Beta-ketoacyl synthase 4 405 6.6E-13 T 13-09-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PMA3_RS05975 e9fcc8dc7c0c6c2abfd841b70c72fa4e 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 1.8E-27 T 13-09-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PMA3_RS05975 e9fcc8dc7c0c6c2abfd841b70c72fa4e 406 Gene3D G3DSA:3.40.47.10 6 257 2.2E-56 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS05975 e9fcc8dc7c0c6c2abfd841b70c72fa4e 406 SUPERFAMILY SSF53901 213 403 3.99E-59 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 Pfam PF11784 Protein of unknown function (DUF3320) 1423 1469 5.8E-12 T 13-09-2016 IPR021754 Protein of unknown function DUF3320 PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 Pfam PF13195 Protein of unknown function (DUF4011) 16 210 3.8E-43 T 13-09-2016 IPR025103 Protein of unknown function DUF4011 PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 PANTHER PTHR10887 894 1227 1.8E-54 T 13-09-2016 PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 PANTHER PTHR10887 13 21 1.8E-54 T 13-09-2016 PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 Gene3D G3DSA:3.40.50.300 316 437 5.3E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 Gene3D G3DSA:3.40.50.300 969 1073 5.3E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 SUPERFAMILY SSF52980 1265 1369 2.9E-14 T 13-09-2016 IPR011335 Restriction endonuclease type II-like PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 Pfam PF13245 Part of AAA domain 344 396 3.6E-9 T 13-09-2016 PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 PANTHER PTHR10887:SF340 325 408 1.8E-54 T 13-09-2016 PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 PANTHER PTHR10887:SF340 894 1227 1.8E-54 T 13-09-2016 PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 PANTHER PTHR10887 325 408 1.8E-54 T 13-09-2016 PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 Pfam PF13087 AAA domain 1039 1225 5.7E-10 T 13-09-2016 PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 SUPERFAMILY SSF52540 326 394 3.39E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 SUPERFAMILY SSF52540 931 1251 3.39E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12745 7fdfc43ff57f10a3b40a82b7a40919c2 1587 PANTHER PTHR10887:SF340 13 21 1.8E-54 T 13-09-2016 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 SUPERFAMILY SSF52540 1 191 5.98E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 PANTHER PTHR23359 1 215 1.3E-107 T 13-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.6E-16 T 13-09-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 Hamap MF_00235 Adenylate kinase [adk]. 1 215 52.532 T 13-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 Pfam PF00406 Adenylate kinase 5 184 6.4E-56 T 13-09-2016 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 PRINTS PR00094 Adenylate kinase signature 81 97 2.7E-34 T 13-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 PRINTS PR00094 Adenylate kinase signature 173 187 2.7E-34 T 13-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 PRINTS PR00094 Adenylate kinase signature 156 171 2.7E-34 T 13-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 PRINTS PR00094 Adenylate kinase signature 32 46 2.7E-34 T 13-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 PRINTS PR00094 Adenylate kinase signature 4 17 2.7E-34 T 13-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 13-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 Gene3D G3DSA:3.40.50.300 1 213 3.7E-78 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04665 8d48bde980c71f4e252a51cd172e7263 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 214 8.2E-75 T 13-09-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 4.7E-43 T 13-09-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 Gene3D G3DSA:3.30.860.10 2 90 3.2E-39 T 13-09-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 PIRSF PIRSF002144 1 91 3.6E-31 T 13-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-09-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 SUPERFAMILY SSF54570 3 83 3.01E-34 T 13-09-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 PANTHER PTHR11880 2 91 5.7E-51 T 13-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.531 T 13-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 Pfam PF00203 Ribosomal protein S19 3 83 1.0E-35 T 13-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.9E-22 T 13-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.9E-22 T 13-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27245 36fd185a11fbfd2df73815610af1a3a9 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.9E-22 T 13-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PMA3_RS19645 830405d78ead6fd7357dcb0ad43d78e2 389 Gene3D G3DSA:2.60.120.650 7 215 9.2E-41 T 13-09-2016 PMA3_RS19645 830405d78ead6fd7357dcb0ad43d78e2 389 SMART SM00558 101 229 2.0E-4 T 13-09-2016 IPR003347 JmjC domain PMA3_RS19645 830405d78ead6fd7357dcb0ad43d78e2 389 Pfam PF08007 Cupin superfamily protein 16 319 3.1E-105 T 13-09-2016 IPR003347 JmjC domain PMA3_RS19645 830405d78ead6fd7357dcb0ad43d78e2 389 PANTHER PTHR13096 9 365 5.0E-67 T 13-09-2016 PMA3_RS19645 830405d78ead6fd7357dcb0ad43d78e2 389 SUPERFAMILY SSF51197 6 299 1.04E-76 T 13-09-2016 PMA3_RS03825 1d2e213fc5187b983f717eada0f01069 328 Pfam PF01593 Flavin containing amine oxidoreductase 111 323 6.5E-12 T 13-09-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PMA3_RS03825 1d2e213fc5187b983f717eada0f01069 328 Gene3D G3DSA:3.90.660.10 44 110 2.7E-60 T 13-09-2016 PMA3_RS03825 1d2e213fc5187b983f717eada0f01069 328 Gene3D G3DSA:3.90.660.10 187 284 2.7E-60 T 13-09-2016 PMA3_RS03825 1d2e213fc5187b983f717eada0f01069 328 SUPERFAMILY SSF51905 287 327 4.32E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03825 1d2e213fc5187b983f717eada0f01069 328 SUPERFAMILY SSF51905 2 196 4.32E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03825 1d2e213fc5187b983f717eada0f01069 328 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 60 3.0E-14 T 13-09-2016 PMA3_RS03825 1d2e213fc5187b983f717eada0f01069 328 Gene3D G3DSA:3.50.50.60 2 41 6.1E-54 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03825 1d2e213fc5187b983f717eada0f01069 328 Gene3D G3DSA:3.50.50.60 111 186 6.1E-54 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03825 1d2e213fc5187b983f717eada0f01069 328 Gene3D G3DSA:3.50.50.60 287 328 6.1E-54 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03825 1d2e213fc5187b983f717eada0f01069 328 PANTHER PTHR16128 5 328 9.9E-86 T 13-09-2016 PMA3_RS15930 0014bc995bddcbc97e2d964975fa5064 187 Gene3D G3DSA:3.40.30.10 4 183 2.1E-64 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS15930 0014bc995bddcbc97e2d964975fa5064 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.5E-105 T 13-09-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS15930 0014bc995bddcbc97e2d964975fa5064 187 PANTHER PTHR10681:SF121 1 187 1.1E-93 T 13-09-2016 PMA3_RS15930 0014bc995bddcbc97e2d964975fa5064 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.2E-5 T 13-09-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS15930 0014bc995bddcbc97e2d964975fa5064 187 PANTHER PTHR10681 1 187 1.1E-93 T 13-09-2016 PMA3_RS15930 0014bc995bddcbc97e2d964975fa5064 187 Pfam PF00578 AhpC/TSA family 5 132 6.5E-34 T 13-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS15930 0014bc995bddcbc97e2d964975fa5064 187 PIRSF PIRSF000239 1 187 1.3E-53 T 13-09-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PMA3_RS15930 0014bc995bddcbc97e2d964975fa5064 187 SUPERFAMILY SSF52833 1 186 2.1E-58 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 SUPERFAMILY SSF46689 458 508 6.57E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 Gene3D G3DSA:3.30.450.40 20 165 2.9E-11 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 Gene3D G3DSA:1.10.8.60 358 405 1.5E-18 T 13-09-2016 PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 PANTHER PTHR32071 184 508 2.2E-149 T 13-09-2016 PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 PANTHER PTHR32071:SF35 184 508 2.2E-149 T 13-09-2016 PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 Gene3D G3DSA:1.10.10.60 406 501 1.8E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 SUPERFAMILY SSF52540 184 419 9.35E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 398 407 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 SMART SM00382 205 348 3.8E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 Pfam PF01590 GAF domain 20 154 4.5E-8 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 209 222 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 271 286 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 Gene3D G3DSA:3.40.50.300 182 357 3.2E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 Pfam PF00158 Sigma-54 interaction domain 185 351 2.6E-66 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 SMART SM00065 15 164 1.3E-7 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS16255 57af8e02903aac423ecaf37364ab020c 509 SUPERFAMILY SSF55781 20 166 3.71E-14 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS19435 82798c7fca46b9a2323d1f5ea8e2de5d 335 Pfam PF13377 Periplasmic binding protein-like domain 167 328 3.0E-44 T 13-09-2016 PMA3_RS19435 82798c7fca46b9a2323d1f5ea8e2de5d 335 PANTHER PTHR30146:SF4 1 334 9.1E-115 T 13-09-2016 PMA3_RS19435 82798c7fca46b9a2323d1f5ea8e2de5d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 5.8E-18 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS19435 82798c7fca46b9a2323d1f5ea8e2de5d 335 PANTHER PTHR30146 1 334 9.1E-115 T 13-09-2016 PMA3_RS19435 82798c7fca46b9a2323d1f5ea8e2de5d 335 SMART SM00354 1 71 1.2E-20 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS19435 82798c7fca46b9a2323d1f5ea8e2de5d 335 Gene3D G3DSA:3.40.50.2300 53 171 5.0E-35 T 13-09-2016 PMA3_RS19435 82798c7fca46b9a2323d1f5ea8e2de5d 335 Gene3D G3DSA:3.40.50.2300 172 309 3.6E-58 T 13-09-2016 PMA3_RS19435 82798c7fca46b9a2323d1f5ea8e2de5d 335 SUPERFAMILY SSF53822 63 329 5.5E-80 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS19435 82798c7fca46b9a2323d1f5ea8e2de5d 335 SUPERFAMILY SSF47413 3 59 1.78E-15 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS19435 82798c7fca46b9a2323d1f5ea8e2de5d 335 Gene3D G3DSA:1.10.260.40 3 52 9.8E-21 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 Gene3D G3DSA:3.40.50.720 7 249 2.1E-55 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PANTHER PTHR24322:SF320 10 134 1.3E-33 T 13-09-2016 PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PANTHER PTHR24322:SF320 150 181 1.3E-33 T 13-09-2016 PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.1E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.1E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.1E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.1E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.7E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.7E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.7E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 Pfam PF00106 short chain dehydrogenase 8 193 1.4E-45 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 212 1.6E-4 T 13-09-2016 PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PANTHER PTHR24322 10 134 1.3E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 PANTHER PTHR24322 150 181 1.3E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS12990 a6e23455d2e604de799c447421d94317 269 SUPERFAMILY SSF51735 1 258 2.33E-57 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11830 2f3ac21b86454b24073da0c842e1bf71 370 Gene3D G3DSA:3.20.20.70 5 337 3.4E-55 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS11830 2f3ac21b86454b24073da0c842e1bf71 370 Pfam PF03060 Nitronate monooxygenase 83 341 6.0E-47 T 13-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PMA3_RS11830 2f3ac21b86454b24073da0c842e1bf71 370 PANTHER PTHR32332 5 239 2.4E-71 T 13-09-2016 PMA3_RS11830 2f3ac21b86454b24073da0c842e1bf71 370 PANTHER PTHR32332 278 361 2.4E-71 T 13-09-2016 PMA3_RS11830 2f3ac21b86454b24073da0c842e1bf71 370 PANTHER PTHR32332:SF20 278 361 2.4E-71 T 13-09-2016 PMA3_RS11830 2f3ac21b86454b24073da0c842e1bf71 370 SUPERFAMILY SSF51412 5 250 1.45E-51 T 13-09-2016 PMA3_RS11830 2f3ac21b86454b24073da0c842e1bf71 370 SUPERFAMILY SSF51412 310 348 1.45E-51 T 13-09-2016 PMA3_RS11830 2f3ac21b86454b24073da0c842e1bf71 370 PANTHER PTHR32332:SF20 5 239 2.4E-71 T 13-09-2016 PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 SUPERFAMILY SSF46689 193 241 4.12E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 PANTHER PTHR11019 31 301 2.0E-42 T 13-09-2016 PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 Gene3D G3DSA:1.10.10.60 247 295 4.1E-18 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 Pfam PF02311 AraC-like ligand binding domain 31 85 9.4E-5 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 SMART SM00342 210 293 8.9E-26 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 Pfam PF12833 Helix-turn-helix domain 216 294 3.0E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 PANTHER PTHR11019:SF123 31 301 2.0E-42 T 13-09-2016 PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 Gene3D G3DSA:1.10.10.60 189 246 2.4E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 SUPERFAMILY SSF46689 246 297 4.26E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 SUPERFAMILY SSF51182 19 93 8.0E-6 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS10460 d453f2fe805636333b5e74ede7d9cc07 316 Gene3D G3DSA:2.60.120.280 30 89 1.0E-4 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS01540 419c4441fb2bf9d6b5d28b9a87d654c7 424 SUPERFAMILY SSF103473 30 415 5.75E-68 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS01540 419c4441fb2bf9d6b5d28b9a87d654c7 424 PANTHER PTHR23501 23 417 6.3E-195 T 13-09-2016 PMA3_RS01540 419c4441fb2bf9d6b5d28b9a87d654c7 424 ProSitePatterns PS00216 Sugar transport proteins signature 1. 93 109 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS01540 419c4441fb2bf9d6b5d28b9a87d654c7 424 PANTHER PTHR23501:SF11 23 417 6.3E-195 T 13-09-2016 PMA3_RS01540 419c4441fb2bf9d6b5d28b9a87d654c7 424 ProSitePatterns PS00216 Sugar transport proteins signature 1. 296 312 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS01540 419c4441fb2bf9d6b5d28b9a87d654c7 424 Gene3D G3DSA:1.20.1250.20 38 218 3.2E-35 T 13-09-2016 PMA3_RS01540 419c4441fb2bf9d6b5d28b9a87d654c7 424 Gene3D G3DSA:1.20.1250.20 245 415 9.3E-17 T 13-09-2016 PMA3_RS01540 419c4441fb2bf9d6b5d28b9a87d654c7 424 Pfam PF07690 Major Facilitator Superfamily 43 379 3.3E-41 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS27495 6ce76d9a97351b9f71e99d140e85c363 224 PANTHER PTHR11749:SF7 2 220 1.3E-144 T 13-09-2016 PMA3_RS27495 6ce76d9a97351b9f71e99d140e85c363 224 Gene3D G3DSA:3.20.20.70 2 219 1.4E-93 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS27495 6ce76d9a97351b9f71e99d140e85c363 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 13-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PMA3_RS27495 6ce76d9a97351b9f71e99d140e85c363 224 PANTHER PTHR11749 2 220 1.3E-144 T 13-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PMA3_RS27495 6ce76d9a97351b9f71e99d140e85c363 224 PIRSF PIRSF001461 1 223 1.8E-102 T 13-09-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PMA3_RS27495 6ce76d9a97351b9f71e99d140e85c363 224 SUPERFAMILY SSF51366 4 218 1.2E-75 T 13-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PMA3_RS27495 6ce76d9a97351b9f71e99d140e85c363 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 2.8E-98 T 13-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PMA3_RS27495 6ce76d9a97351b9f71e99d140e85c363 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 13-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PMA3_RS27495 6ce76d9a97351b9f71e99d140e85c363 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.2E-88 T 13-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PMA3_RS11280 230058bd2658ebfbd334b9cf4eb471be 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 145 2.6E-40 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS11280 230058bd2658ebfbd334b9cf4eb471be 172 PANTHER PTHR36152:SF1 1 169 9.0E-39 T 13-09-2016 PMA3_RS11280 230058bd2658ebfbd334b9cf4eb471be 172 SUPERFAMILY SSF141452 2 170 2.35E-45 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS11280 230058bd2658ebfbd334b9cf4eb471be 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 163 2.3E-24 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS11280 230058bd2658ebfbd334b9cf4eb471be 172 Gene3D G3DSA:2.30.110.20 1 170 1.3E-60 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS11280 230058bd2658ebfbd334b9cf4eb471be 172 PANTHER PTHR36152 1 169 9.0E-39 T 13-09-2016 PMA3_RS21505 121689068c943f7949b6a01f4cbf3ba6 58 PANTHER PTHR37531 1 55 3.6E-22 T 13-09-2016 PMA3_RS21505 121689068c943f7949b6a01f4cbf3ba6 58 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 1.4E-19 T 13-09-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PMA3_RS21505 121689068c943f7949b6a01f4cbf3ba6 58 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 6.0E-16 T 13-09-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PMA3_RS21505 121689068c943f7949b6a01f4cbf3ba6 58 PANTHER PTHR37531:SF1 1 55 3.6E-22 T 13-09-2016 PMA3_RS22855 66b35f5e3befc76392ed54966983e7cb 203 SUPERFAMILY SSF140478 32 188 4.58E-54 T 13-09-2016 IPR023353 LemA-like domain PMA3_RS22855 66b35f5e3befc76392ed54966983e7cb 203 Gene3D G3DSA:1.20.1440.20 21 202 2.3E-63 T 13-09-2016 IPR023353 LemA-like domain PMA3_RS22855 66b35f5e3befc76392ed54966983e7cb 203 PANTHER PTHR34478:SF2 4 203 6.3E-76 T 13-09-2016 PMA3_RS22855 66b35f5e3befc76392ed54966983e7cb 203 Pfam PF04011 LemA family 16 202 1.5E-65 T 13-09-2016 IPR007156 LemA PMA3_RS22855 66b35f5e3befc76392ed54966983e7cb 203 PANTHER PTHR34478 4 203 6.3E-76 T 13-09-2016 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 PANTHER PTHR24423:SF354 168 447 5.8E-120 T 13-09-2016 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 446 1.9E-153 T 13-09-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 447 6.4E-20 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 SMART SM00304 174 227 1.5E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 SUPERFAMILY SSF158472 175 224 1.11E-6 T 13-09-2016 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 Gene3D G3DSA:1.10.287.130 218 290 4.7E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 PANTHER PTHR24423:SF354 1 9 5.8E-120 T 13-09-2016 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 Pfam PF00672 HAMP domain 155 223 7.7E-13 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 294 6.0E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 SMART SM00388 228 294 2.0E-17 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 1.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 1.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 1.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 1.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 Gene3D G3DSA:3.30.565.10 299 447 1.3E-40 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 PANTHER PTHR24423 1 9 5.8E-120 T 13-09-2016 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 PANTHER PTHR24423 65 124 5.8E-120 T 13-09-2016 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 SMART SM00387 337 449 5.5E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 PANTHER PTHR24423 168 447 5.8E-120 T 13-09-2016 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 SUPERFAMILY SSF55874 283 447 8.77E-41 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 PANTHER PTHR24423:SF354 65 124 5.8E-120 T 13-09-2016 PMA3_RS08715 7c98bddb25e846fdb90b9b6e88346bf8 449 SUPERFAMILY SSF47384 211 294 9.22E-17 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 SUPERFAMILY SSF53335 67 251 7.79E-42 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 Gene3D G3DSA:1.10.155.10 5 64 9.0E-4 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 PRINTS PR00996 Glutamate methyltransferase family signature 99 119 1.4E-20 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 1.4E-20 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 PRINTS PR00996 Glutamate methyltransferase family signature 132 148 1.4E-20 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 PRINTS PR00996 Glutamate methyltransferase family signature 201 215 1.4E-20 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 PRINTS PR00996 Glutamate methyltransferase family signature 220 243 1.4E-20 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 Pfam PF01739 CheR methyltransferase, SAM binding domain 68 241 1.3E-37 T 13-09-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 PANTHER PTHR24422:SF14 5 415 1.5E-79 T 13-09-2016 PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 Gene3D G3DSA:3.40.50.150 67 243 2.9E-48 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 PANTHER PTHR24422 5 415 1.5E-79 T 13-09-2016 PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 Gene3D G3DSA:1.25.40.10 308 411 1.6E-14 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 SUPERFAMILY SSF48452 312 407 1.02E-11 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS04585 c4a2ba3eb4f00917287da63029b62844 423 SMART SM00138 1 261 4.7E-36 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 PANTHER PTHR30473:SF2 13 188 5.6E-196 T 13-09-2016 PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 PANTHER PTHR30473:SF2 207 459 5.6E-196 T 13-09-2016 PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 Gene3D G3DSA:3.40.50.1010 111 164 1.7E-12 T 13-09-2016 IPR029060 PIN domain-like PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 Gene3D G3DSA:3.40.50.1010 16 74 1.7E-12 T 13-09-2016 IPR029060 PIN domain-like PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 SMART SM00670 14 148 5.3E-9 T 13-09-2016 IPR002716 PIN domain PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 Pfam PF02562 PhoH-like protein 254 449 3.5E-45 T 13-09-2016 IPR003714 PhoH-like protein GO:0005524 PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 PANTHER PTHR30473 13 188 5.6E-196 T 13-09-2016 PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 PANTHER PTHR30473 207 459 5.6E-196 T 13-09-2016 PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 SUPERFAMILY SSF88723 13 75 4.71E-15 T 13-09-2016 IPR029060 PIN domain-like PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 SUPERFAMILY SSF88723 111 161 4.71E-15 T 13-09-2016 IPR029060 PIN domain-like PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 Pfam PF13638 PIN domain 16 160 1.7E-37 T 13-09-2016 IPR002716 PIN domain PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 Gene3D G3DSA:3.40.50.300 252 461 3.2E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24590 9f07196ff1bd695a2602ec4447b820da 464 SUPERFAMILY SSF52540 204 444 6.36E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 3.7E-44 T 13-09-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 13-09-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 Gene3D G3DSA:2.40.30.20 3 94 5.4E-33 T 13-09-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 Gene3D G3DSA:3.40.50.300 95 383 5.5E-111 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 Gene3D G3DSA:1.20.150.20 384 511 6.2E-48 T 13-09-2016 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 49.709 T 13-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 SUPERFAMILY SSF47917 384 512 3.4E-45 T 13-09-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 PIRSF PIRSF039088 2 514 9.9E-233 T 13-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 4.7E-73 T 13-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 PANTHER PTHR15184 1 497 4.0E-293 T 13-09-2016 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 SUPERFAMILY SSF52540 97 382 5.94E-92 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 SUPERFAMILY SSF50615 11 95 1.81E-28 T 13-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 513 8.9E-251 T 13-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 5.0E-15 T 13-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30015 950f3310d9d7223ebaa04f934e91e03b 514 PANTHER PTHR15184:SF3 1 497 4.0E-293 T 13-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS10730 45f84dc2be3c0bba341830da739c5378 309 PANTHER PTHR10314 2 302 2.1E-119 T 13-09-2016 PMA3_RS10730 45f84dc2be3c0bba341830da739c5378 309 Gene3D G3DSA:3.40.50.1100 53 294 4.2E-61 T 13-09-2016 PMA3_RS10730 45f84dc2be3c0bba341830da739c5378 309 PANTHER PTHR10314:SF85 2 302 2.1E-119 T 13-09-2016 PMA3_RS10730 45f84dc2be3c0bba341830da739c5378 309 SUPERFAMILY SSF53686 3 293 5.89E-77 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS10730 45f84dc2be3c0bba341830da739c5378 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 3 288 1.2E-70 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS10730 45f84dc2be3c0bba341830da739c5378 309 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 26 39 - T 13-09-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 SUPERFAMILY SSF55874 303 464 3.93E-41 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 SMART SM00387 354 463 4.2E-31 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 Gene3D G3DSA:3.30.565.10 313 464 6.8E-44 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 461 2.9E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 PANTHER PTHR24423 123 239 9.6E-90 T 13-09-2016 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 1.2E-19 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 1.2E-19 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 1.2E-19 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 1.2E-19 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 PANTHER PTHR24423:SF497 277 463 9.6E-90 T 13-09-2016 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 Gene3D G3DSA:3.40.50.2300 5 162 6.1E-28 T 13-09-2016 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 SUPERFAMILY SSF47384 206 246 3.92E-6 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 SUPERFAMILY SSF47384 281 313 3.92E-6 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 SMART SM00388 211 313 6.2E-4 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 SUPERFAMILY SSF52172 6 188 2.99E-13 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 PANTHER PTHR24423 277 463 9.6E-90 T 13-09-2016 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 312 2.5E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 PANTHER PTHR24423:SF497 123 239 9.6E-90 T 13-09-2016 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 Pfam PF00072 Response regulator receiver domain 57 150 4.6E-7 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 Gene3D G3DSA:1.10.287.130 206 237 4.0E-5 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23930 b19ea6d08af3900c7d224bff37e3b325 468 Gene3D G3DSA:1.10.287.130 280 309 4.0E-5 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02300 6999a2e674b06d70c9c20c5312deda54 688 PANTHER PTHR30441:SF2 1 683 5.1E-145 T 13-09-2016 PMA3_RS02300 6999a2e674b06d70c9c20c5312deda54 688 PANTHER PTHR30441 1 683 5.1E-145 T 13-09-2016 PMA3_RS02300 6999a2e674b06d70c9c20c5312deda54 688 Pfam PF05170 AsmA family 1 575 6.8E-146 T 13-09-2016 IPR007844 AsmA PMA3_RS16600 1fb99173c2e568e6ef0e26ef149d45df 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 1.6E-12 T 13-09-2016 PMA3_RS16600 1fb99173c2e568e6ef0e26ef149d45df 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 1.6E-12 T 13-09-2016 PMA3_RS16600 1fb99173c2e568e6ef0e26ef149d45df 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 1.6E-12 T 13-09-2016 PMA3_RS16600 1fb99173c2e568e6ef0e26ef149d45df 474 Pfam PF07690 Major Facilitator Superfamily 24 416 2.4E-59 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS16600 1fb99173c2e568e6ef0e26ef149d45df 474 Gene3D G3DSA:1.20.1250.20 270 465 3.0E-22 T 13-09-2016 PMA3_RS16600 1fb99173c2e568e6ef0e26ef149d45df 474 Gene3D G3DSA:1.20.1250.20 19 201 4.3E-30 T 13-09-2016 PMA3_RS16600 1fb99173c2e568e6ef0e26ef149d45df 474 SUPERFAMILY SSF103473 255 469 4.19E-66 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS16600 1fb99173c2e568e6ef0e26ef149d45df 474 SUPERFAMILY SSF103473 11 201 4.19E-66 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS16600 1fb99173c2e568e6ef0e26ef149d45df 474 PANTHER PTHR23501 12 473 7.0E-106 T 13-09-2016 PMA3_RS24115 a358f8cd0348f5ddf13282fdf84ec0b1 407 Gene3D G3DSA:2.40.170.10 26 406 1.8E-118 T 13-09-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PMA3_RS24115 a358f8cd0348f5ddf13282fdf84ec0b1 407 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 374 9.0E-171 T 13-09-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PMA3_RS24115 a358f8cd0348f5ddf13282fdf84ec0b1 407 PANTHER PTHR38762 1 406 3.7E-59 T 13-09-2016 PMA3_RS24115 a358f8cd0348f5ddf13282fdf84ec0b1 407 Pfam PF02264 LamB porin 27 406 1.1E-121 T 13-09-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PMA3_RS24115 a358f8cd0348f5ddf13282fdf84ec0b1 407 SUPERFAMILY SSF56935 25 406 5.49E-118 T 13-09-2016 PMA3_RS29140 4e8e9bfd20243ae8831b5df67e57f6a9 500 PANTHER PTHR30005 3 500 1.5E-205 T 13-09-2016 PMA3_RS29140 4e8e9bfd20243ae8831b5df67e57f6a9 500 PIRSF PIRSF001267 2 500 2.2E-196 T 13-09-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 PMA3_RS29140 4e8e9bfd20243ae8831b5df67e57f6a9 500 SUPERFAMILY SSF53067 12 132 6.96E-38 T 13-09-2016 PMA3_RS29140 4e8e9bfd20243ae8831b5df67e57f6a9 500 PANTHER PTHR30005:SF4 3 500 1.5E-205 T 13-09-2016 PMA3_RS29140 4e8e9bfd20243ae8831b5df67e57f6a9 500 Gene3D G3DSA:3.30.420.40 4 132 4.1E-47 T 13-09-2016 PMA3_RS29140 4e8e9bfd20243ae8831b5df67e57f6a9 500 Pfam PF02541 Ppx/GppA phosphatase family 25 309 8.1E-75 T 13-09-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 PMA3_RS29140 4e8e9bfd20243ae8831b5df67e57f6a9 500 SUPERFAMILY SSF109604 313 495 3.14E-50 T 13-09-2016 PMA3_RS29140 4e8e9bfd20243ae8831b5df67e57f6a9 500 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 306 4.7E-101 T 13-09-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 PMA3_RS29140 4e8e9bfd20243ae8831b5df67e57f6a9 500 SUPERFAMILY SSF53067 137 311 3.89E-44 T 13-09-2016 PMA3_RS29140 4e8e9bfd20243ae8831b5df67e57f6a9 500 Gene3D G3DSA:3.30.420.150 135 311 4.1E-52 T 13-09-2016 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 Pfam PF04539 Sigma-70 region 3 180 254 4.3E-21 T 13-09-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 57 334 1.8E-138 T 13-09-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 PANTHER PTHR30603 18 335 1.7E-180 T 13-09-2016 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 97 323 1.2E-34 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 Gene3D G3DSA:1.10.10.10 263 329 3.4E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 SUPERFAMILY SSF88659 231 328 1.45E-23 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 SUPERFAMILY SSF88946 38 167 8.9E-45 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 293 319 - T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 Pfam PF00140 Sigma-70 factor, region 1.2 62 94 5.3E-11 T 13-09-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 Pfam PF04542 Sigma-70 region 2 100 169 6.8E-22 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 SUPERFAMILY SSF88659 173 247 2.88E-14 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 Pfam PF04545 Sigma-70, region 4 268 321 1.3E-14 T 13-09-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 Gene3D G3DSA:1.10.601.10 42 169 7.6E-58 T 13-09-2016 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 7 334 40.288 T 13-09-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 124 137 - T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 PRINTS PR00046 Major sigma-70 factor signature 293 308 2.6E-26 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 PRINTS PR00046 Major sigma-70 factor signature 272 284 2.6E-26 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 PRINTS PR00046 Major sigma-70 factor signature 148 156 2.6E-26 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 PRINTS PR00046 Major sigma-70 factor signature 124 137 2.6E-26 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 PRINTS PR00046 Major sigma-70 factor signature 308 319 2.6E-26 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 Gene3D G3DSA:1.10.10.10 173 222 7.0E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS04980 18a4a1933fefe82642c837ea0f268e5b 335 PANTHER PTHR30603:SF15 18 335 1.7E-180 T 13-09-2016 PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 Gene3D G3DSA:3.40.50.720 2 261 9.8E-61 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 PANTHER PTHR24322:SF57 158 190 2.4E-37 T 13-09-2016 PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 PANTHER PTHR24322 10 142 2.4E-37 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.8E-19 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.8E-19 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.8E-19 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 4.8E-19 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.8E-19 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.8E-19 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 PANTHER PTHR24322 158 190 2.4E-37 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 PANTHER PTHR24322:SF57 10 142 2.4E-37 T 13-09-2016 PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 SUPERFAMILY SSF51735 4 260 1.86E-62 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11890 b2ffcce745c0d2d1a2831a6e8a53d750 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 258 4.3E-44 T 13-09-2016 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 145 256 7.5E-45 T 13-09-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 SUPERFAMILY SSF47598 3 45 2.37E-10 T 13-09-2016 IPR010985 Ribbon-helix-helix GO:0006355 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 SUPERFAMILY SSF81935 85 258 1.57E-64 T 13-09-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 SUPERFAMILY SSF51730 259 615 4.32E-123 T 13-09-2016 IPR029041 FAD-linked oxidoreductase-like PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 SUPERFAMILY SSF53720 654 1107 3.27E-131 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 PANTHER PTHR11699:SF18 652 1107 5.7E-179 T 13-09-2016 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 607 1107 4.7E-243 T 13-09-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 Gene3D G3DSA:1.20.5.550 84 135 4.5E-24 T 13-09-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 Gene3D G3DSA:3.40.309.10 895 1084 1.7E-48 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 Gene3D G3DSA:3.20.20.220 258 614 3.8E-121 T 13-09-2016 IPR029041 FAD-linked oxidoreductase-like PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 Pfam PF01619 Proline dehydrogenase 267 566 1.7E-99 T 13-09-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 PANTHER PTHR11699 652 1107 5.7E-179 T 13-09-2016 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 Gene3D G3DSA:3.40.605.10 656 894 7.1E-71 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 907 918 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 Gene3D G3DSA:1.10.2060.10 141 257 6.2E-53 T 13-09-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 PIRSF PIRSF000197 71 1316 0.0 T 13-09-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PMA3_RS01730 3f188642bd1f2e020bd102ce1d0e95ed 1316 Pfam PF00171 Aldehyde dehydrogenase family 653 1104 1.3E-118 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16460 890f48821b66714b5546395f1c289b32 632 PANTHER PTHR33362 67 628 7.8E-211 T 13-09-2016 PMA3_RS16460 890f48821b66714b5546395f1c289b32 632 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 49 177 1.7E-26 T 13-09-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PMA3_RS16460 890f48821b66714b5546395f1c289b32 632 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 225 626 1.6E-88 T 13-09-2016 IPR004681 TRAP transporter permease protein GO:0016021 PMA3_RS16460 890f48821b66714b5546395f1c289b32 632 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 216 624 6.9E-99 T 13-09-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PMA3_RS16460 890f48821b66714b5546395f1c289b32 632 PANTHER PTHR33362:SF8 67 628 7.8E-211 T 13-09-2016 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 350 7.7E-20 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 252 3.8E-85 T 13-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 354 3.1E-123 T 13-09-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 Gene3D G3DSA:3.30.1360.120 3 67 3.0E-26 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 Gene3D G3DSA:3.30.1360.120 131 230 3.3E-23 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 SUPERFAMILY SSF103025 3 277 2.67E-88 T 13-09-2016 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 PANTHER PTHR13847:SF5 5 353 5.1E-59 T 13-09-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 355 43.406 T 13-09-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 PANTHER PTHR13847 5 353 5.1E-59 T 13-09-2016 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 Gene3D G3DSA:2.40.30.110 278 357 2.1E-26 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 Gene3D G3DSA:3.30.70.1400 68 130 4.2E-15 T 13-09-2016 PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 SUPERFAMILY SSF101790 270 357 3.43E-24 T 13-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PMA3_RS29010 773420429a06f7b284d4b1e1fcfab9b1 360 PIRSF PIRSF006487 1 359 2.3E-82 T 13-09-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS13850 65604f56859ca31451e9b85eb835dec8 196 Gene3D G3DSA:2.20.25.90 39 109 1.2E-24 T 13-09-2016 PMA3_RS13850 65604f56859ca31451e9b85eb835dec8 196 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 49 67 - T 13-09-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PMA3_RS13850 65604f56859ca31451e9b85eb835dec8 196 PANTHER PTHR11615:SF126 46 196 9.3E-85 T 13-09-2016 PMA3_RS13850 65604f56859ca31451e9b85eb835dec8 196 Pfam PF00384 Molybdopterin oxidoreductase 108 140 1.5E-5 T 13-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PMA3_RS13850 65604f56859ca31451e9b85eb835dec8 196 Gene3D G3DSA:3.40.50.740 176 195 7.2E-13 T 13-09-2016 PMA3_RS13850 65604f56859ca31451e9b85eb835dec8 196 Gene3D G3DSA:3.40.50.740 110 144 7.2E-13 T 13-09-2016 PMA3_RS13850 65604f56859ca31451e9b85eb835dec8 196 PANTHER PTHR11615 46 196 9.3E-85 T 13-09-2016 PMA3_RS13850 65604f56859ca31451e9b85eb835dec8 196 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 45 104 2.1E-19 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS13850 65604f56859ca31451e9b85eb835dec8 196 SMART SM00926 44 105 9.2E-23 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS13850 65604f56859ca31451e9b85eb835dec8 196 SUPERFAMILY SSF53706 37 196 7.59E-55 T 13-09-2016 PMA3_RS08490 4738298e65ba4fc702c962a21ca6dc76 386 Gene3D G3DSA:3.90.1150.10 260 384 2.8E-38 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS08490 4738298e65ba4fc702c962a21ca6dc76 386 PANTHER PTHR30244 1 386 5.7E-134 T 13-09-2016 PMA3_RS08490 4738298e65ba4fc702c962a21ca6dc76 386 PIRSF PIRSF000390 1 386 3.5E-106 T 13-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PMA3_RS08490 4738298e65ba4fc702c962a21ca6dc76 386 Gene3D G3DSA:3.40.640.10 1 259 5.0E-79 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS08490 4738298e65ba4fc702c962a21ca6dc76 386 PANTHER PTHR30244:SF3 1 386 5.7E-134 T 13-09-2016 PMA3_RS08490 4738298e65ba4fc702c962a21ca6dc76 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 381 9.5E-110 T 13-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PMA3_RS08490 4738298e65ba4fc702c962a21ca6dc76 386 SUPERFAMILY SSF53383 2 383 2.67E-109 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS08490 4738298e65ba4fc702c962a21ca6dc76 386 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 383 2.0E-173 T 13-09-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase PMA3_RS07245 af2b846a89012bf6bb7f16b40ac242ed 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 9.3E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS07245 af2b846a89012bf6bb7f16b40ac242ed 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 9.3E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS07245 af2b846a89012bf6bb7f16b40ac242ed 215 PANTHER PTHR30055:SF56 13 203 9.7E-73 T 13-09-2016 PMA3_RS07245 af2b846a89012bf6bb7f16b40ac242ed 215 Gene3D G3DSA:1.10.357.10 74 204 1.7E-37 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS07245 af2b846a89012bf6bb7f16b40ac242ed 215 SUPERFAMILY SSF46689 21 100 2.54E-18 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS07245 af2b846a89012bf6bb7f16b40ac242ed 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 2.9E-16 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS07245 af2b846a89012bf6bb7f16b40ac242ed 215 SUPERFAMILY SSF48498 96 203 2.08E-17 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS07245 af2b846a89012bf6bb7f16b40ac242ed 215 Gene3D G3DSA:1.10.10.60 22 73 2.5E-20 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS07245 af2b846a89012bf6bb7f16b40ac242ed 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 41 72 - T 13-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PMA3_RS07245 af2b846a89012bf6bb7f16b40ac242ed 215 PANTHER PTHR30055 13 203 9.7E-73 T 13-09-2016 PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 194 1.2E-6 T 13-09-2016 PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 305 1.2E-6 T 13-09-2016 PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 362 1.2E-6 T 13-09-2016 PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 PANTHER PTHR23023 168 592 1.2E-119 T 13-09-2016 PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 SUPERFAMILY SSF51905 173 375 7.17E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 Gene3D G3DSA:3.10.450.50 13 104 2.1E-7 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 SUPERFAMILY SSF51905 455 573 3.0E-6 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 SUPERFAMILY SSF51905 335 380 3.0E-6 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 SUPERFAMILY SSF54427 13 99 1.11E-8 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 Gene3D G3DSA:3.50.50.60 174 378 9.3E-46 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 PANTHER PTHR23023:SF100 168 592 1.2E-119 T 13-09-2016 PMA3_RS14445 51eafa56e71d75d9327d2fc7db2dfe23 607 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 174 369 3.0E-18 T 13-09-2016 PMA3_RS18215 3917b3f0e355f3e2880b8fb27fe689b1 312 SUPERFAMILY SSF53613 3 310 2.34E-64 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS18215 3917b3f0e355f3e2880b8fb27fe689b1 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 13-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PMA3_RS18215 3917b3f0e355f3e2880b8fb27fe689b1 312 Pfam PF00294 pfkB family carbohydrate kinase 4 306 3.3E-38 T 13-09-2016 IPR011611 Carbohydrate kinase PfkB PMA3_RS18215 3917b3f0e355f3e2880b8fb27fe689b1 312 PANTHER PTHR10584:SF161 3 312 4.0E-80 T 13-09-2016 PMA3_RS18215 3917b3f0e355f3e2880b8fb27fe689b1 312 Gene3D G3DSA:3.40.1190.20 3 312 5.4E-65 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS18215 3917b3f0e355f3e2880b8fb27fe689b1 312 PANTHER PTHR10584 3 312 4.0E-80 T 13-09-2016 PMA3_RS24315 cd0b5b5d8c0ea2a41bce394758e499e8 374 SUPERFAMILY SSF51713 2 365 1.44E-160 T 13-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS24315 cd0b5b5d8c0ea2a41bce394758e499e8 374 PANTHER PTHR21148 1 366 7.8E-173 T 13-09-2016 PMA3_RS24315 cd0b5b5d8c0ea2a41bce394758e499e8 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 368 3.0E-166 T 13-09-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS24315 cd0b5b5d8c0ea2a41bce394758e499e8 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 362 5.1E-89 T 13-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS24315 cd0b5b5d8c0ea2a41bce394758e499e8 374 PANTHER PTHR21148:SF26 1 366 7.8E-173 T 13-09-2016 PMA3_RS24315 cd0b5b5d8c0ea2a41bce394758e499e8 374 Gene3D G3DSA:3.20.20.105 2 366 2.7E-164 T 13-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS24315 cd0b5b5d8c0ea2a41bce394758e499e8 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 360 56.464 T 13-09-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS24315 cd0b5b5d8c0ea2a41bce394758e499e8 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 367 1.5E-158 T 13-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS09750 645c2307a989ef6eb6ca93672ec4dd8c 246 Pfam PF00665 Integrase core domain 81 197 1.8E-22 T 13-09-2016 IPR001584 Integrase, catalytic core GO:0015074 PMA3_RS09750 645c2307a989ef6eb6ca93672ec4dd8c 246 Gene3D G3DSA:3.30.420.10 74 236 3.1E-27 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS09750 645c2307a989ef6eb6ca93672ec4dd8c 246 SUPERFAMILY SSF53098 77 240 1.13E-28 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS09750 645c2307a989ef6eb6ca93672ec4dd8c 246 Pfam PF13276 HTH-like domain 6 60 4.0E-10 T 13-09-2016 IPR025948 HTH-like domain PMA3_RS27895 645c2307a989ef6eb6ca93672ec4dd8c 246 Pfam PF00665 Integrase core domain 81 197 1.8E-22 T 13-09-2016 IPR001584 Integrase, catalytic core GO:0015074 PMA3_RS27895 645c2307a989ef6eb6ca93672ec4dd8c 246 Gene3D G3DSA:3.30.420.10 74 236 3.1E-27 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS27895 645c2307a989ef6eb6ca93672ec4dd8c 246 SUPERFAMILY SSF53098 77 240 1.13E-28 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS27895 645c2307a989ef6eb6ca93672ec4dd8c 246 Pfam PF13276 HTH-like domain 6 60 4.0E-10 T 13-09-2016 IPR025948 HTH-like domain PMA3_RS18720 5bce6c4cb912d7585430c5ec5cc7044d 254 PANTHER PTHR24220:SF400 7 246 1.6E-115 T 13-09-2016 PMA3_RS18720 5bce6c4cb912d7585430c5ec5cc7044d 254 PANTHER PTHR24220 7 246 1.6E-115 T 13-09-2016 PMA3_RS18720 5bce6c4cb912d7585430c5ec5cc7044d 254 Gene3D G3DSA:3.40.50.300 2 244 1.3E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18720 5bce6c4cb912d7585430c5ec5cc7044d 254 Pfam PF00005 ABC transporter 22 177 2.7E-23 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS18720 5bce6c4cb912d7585430c5ec5cc7044d 254 SUPERFAMILY SSF52540 4 246 2.46E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18720 5bce6c4cb912d7585430c5ec5cc7044d 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 246 2.3E-5 T 13-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PMA3_RS18720 5bce6c4cb912d7585430c5ec5cc7044d 254 SMART SM00382 30 223 7.8E-4 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS02930 fe352c946aed1ac6d2465b89ff7283c5 288 Pfam PF04228 Putative neutral zinc metallopeptidase 1 283 1.1E-90 T 13-09-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PMA3_RS02930 fe352c946aed1ac6d2465b89ff7283c5 288 PANTHER PTHR30168 2 288 5.3E-95 T 13-09-2016 PMA3_RS00020 98f1d66fcf7b9569f8319c8460382e6d 306 PANTHER PTHR30477:SF1 4 278 1.2E-69 T 13-09-2016 PMA3_RS00020 98f1d66fcf7b9569f8319c8460382e6d 306 PANTHER PTHR30477 4 278 1.2E-69 T 13-09-2016 PMA3_RS00020 98f1d66fcf7b9569f8319c8460382e6d 306 SUPERFAMILY SSF53807 24 303 3.58E-69 T 13-09-2016 PMA3_RS00020 98f1d66fcf7b9569f8319c8460382e6d 306 Gene3D G3DSA:3.40.50.1980 195 304 5.1E-21 T 13-09-2016 PMA3_RS00020 98f1d66fcf7b9569f8319c8460382e6d 306 Gene3D G3DSA:3.40.50.1980 20 193 6.0E-42 T 13-09-2016 PMA3_RS00020 98f1d66fcf7b9569f8319c8460382e6d 306 PRINTS PR00690 Adhesin family signature 192 213 1.4E-5 T 13-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 PMA3_RS00020 98f1d66fcf7b9569f8319c8460382e6d 306 PRINTS PR00690 Adhesin family signature 55 68 1.4E-5 T 13-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 PMA3_RS00020 98f1d66fcf7b9569f8319c8460382e6d 306 PRINTS PR00690 Adhesin family signature 68 85 1.4E-5 T 13-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 PMA3_RS00020 98f1d66fcf7b9569f8319c8460382e6d 306 Pfam PF01297 Zinc-uptake complex component A periplasmic 27 300 2.3E-54 T 13-09-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PMA3_RS17760 d21b738426d68e1998f64f1960122f5b 345 Gene3D G3DSA:1.10.10.60 284 333 1.3E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17760 d21b738426d68e1998f64f1960122f5b 345 PANTHER PTHR11019 191 338 1.0E-30 T 13-09-2016 PMA3_RS17760 d21b738426d68e1998f64f1960122f5b 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 5.1E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS17760 d21b738426d68e1998f64f1960122f5b 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 5.1E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS17760 d21b738426d68e1998f64f1960122f5b 345 Pfam PF12833 Helix-turn-helix domain 259 332 8.1E-17 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17760 d21b738426d68e1998f64f1960122f5b 345 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 27 204 5.5E-33 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS17760 d21b738426d68e1998f64f1960122f5b 345 SMART SM00342 247 330 7.1E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17760 d21b738426d68e1998f64f1960122f5b 345 PANTHER PTHR11019:SF52 191 338 1.0E-30 T 13-09-2016 PMA3_RS17760 d21b738426d68e1998f64f1960122f5b 345 SUPERFAMILY SSF46689 284 334 5.82E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 PANTHER PTHR11615:SF119 261 720 8.6E-268 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 434 451 - T 13-09-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 SMART SM00926 3 56 4.2E-17 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 8 26 - T 13-09-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 Pfam PF04324 BFD-like [2Fe-2S] binding domain 849 895 4.0E-7 T 13-09-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 SUPERFAMILY SSF53706 2 519 1.57E-194 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 PANTHER PTHR11615:SF119 1 245 8.6E-268 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 Gene3D G3DSA:3.40.228.10 136 317 2.7E-66 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 Gene3D G3DSA:2.20.25.90 4 52 4.6E-19 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 5 52 1.9E-16 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 Pfam PF00384 Molybdopterin oxidoreductase 63 488 7.4E-83 T 13-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 PANTHER PTHR11615 261 720 8.6E-268 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 Gene3D G3DSA:3.40.50.740 374 520 1.9E-69 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 Gene3D G3DSA:3.40.50.740 62 134 1.9E-69 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 Gene3D G3DSA:3.40.50.740 318 340 1.9E-69 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 SUPERFAMILY SSF50692 579 717 4.07E-38 T 13-09-2016 IPR009010 Aspartate decarboxylase-like domain PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 Gene3D G3DSA:2.40.40.20 538 703 6.5E-45 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 PANTHER PTHR11615 1 245 8.6E-268 T 13-09-2016 PMA3_RS20425 407f6a0e3620e5eec2463cd6af22ba48 905 Pfam PF01568 Molydopterin dinucleotide binding domain 587 695 2.5E-24 T 13-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 PIRSF PIRSF002560 1 157 1.8E-73 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.1E-75 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 Pfam PF00210 Ferritin-like domain 8 143 2.5E-40 T 13-09-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 SUPERFAMILY SSF47240 1 154 1.98E-53 T 13-09-2016 IPR009078 Ferritin-like superfamily PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 PANTHER PTHR30295:SF9 1 154 1.9E-59 T 13-09-2016 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 PRINTS PR00601 Bacterioferritin signature 23 43 6.6E-70 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 PRINTS PR00601 Bacterioferritin signature 65 85 6.6E-70 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 PRINTS PR00601 Bacterioferritin signature 86 106 6.6E-70 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 PRINTS PR00601 Bacterioferritin signature 107 127 6.6E-70 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 PRINTS PR00601 Bacterioferritin signature 44 64 6.6E-70 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 PRINTS PR00601 Bacterioferritin signature 3 22 6.6E-70 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 PRINTS PR00601 Bacterioferritin signature 128 149 6.6E-70 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 PANTHER PTHR30295 1 154 1.9E-59 T 13-09-2016 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS23780 1ad0c3dcf532fd5323cc6c4ae0b0c45f 157 Gene3D G3DSA:1.20.1260.10 1 156 1.8E-64 T 13-09-2016 IPR012347 Ferritin-related PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 SUPERFAMILY SSF52540 137 456 2.74E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 SUPERFAMILY SSF52540 4 169 1.03E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 PIRSF PIRSF006485 1 458 5.1E-171 T 13-09-2016 IPR016484 GTP-binding protein EngA GO:0005525 PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 Gene3D G3DSA:3.40.50.300 3 173 2.6E-45 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 Gene3D G3DSA:3.40.50.300 191 376 2.2E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 PANTHER PTHR11649 1 450 1.4E-147 T 13-09-2016 PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 1.9E-21 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 194 322 8.6E-23 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.0E-9 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.0E-9 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.3E-28 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 Pfam PF01926 50S ribosome-binding GTPase 196 314 2.2E-25 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 Hamap MF_00195 GTPase Der [der]. 2 453 37.936 T 13-09-2016 IPR016484 GTP-binding protein EngA GO:0005525 PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 Gene3D G3DSA:3.30.300.20 377 451 9.1E-22 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 370 450 4.4E-25 T 13-09-2016 IPR032859 GTPase Der, C-terminal KH-domain-like PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 450 3.8E-173 T 13-09-2016 IPR016484 GTP-binding protein EngA GO:0005525 PMA3_RS24195 adfc29e504a84c642bf244d90c05d014 489 PANTHER PTHR11649:SF5 1 450 1.4E-147 T 13-09-2016 IPR016484 GTP-binding protein EngA GO:0005525 PMA3_RS18430 56b870523083aaa29974bf1ffaf516c5 180 Gene3D G3DSA:3.40.50.1240 46 177 6.3E-7 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS18430 56b870523083aaa29974bf1ffaf516c5 180 SUPERFAMILY SSF53254 45 177 3.64E-8 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS09660 d2380c14a498f7f2a3e6825d693c53ef 105 SUPERFAMILY SSF103481 5 104 1.07E-19 T 13-09-2016 PMA3_RS09660 d2380c14a498f7f2a3e6825d693c53ef 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.5E-28 T 13-09-2016 IPR000390 Small multidrug resistance protein family GO:0016021 PMA3_RS09660 d2380c14a498f7f2a3e6825d693c53ef 105 PANTHER PTHR30561:SF0 1 104 3.0E-41 T 13-09-2016 PMA3_RS09660 d2380c14a498f7f2a3e6825d693c53ef 105 PANTHER PTHR30561 1 104 3.0E-41 T 13-09-2016 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 SMART SM00796 813 1045 2.7E-111 T 13-09-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Gene3D G3DSA:3.30.1490.20 129 201 6.4E-22 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 SMART SM00878 338 446 2.3E-50 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Pfam PF02785 Biotin carboxylase C-terminal domain 338 446 4.7E-32 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Gene3D G3DSA:2.40.100.10 632 760 5.8E-31 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Gene3D G3DSA:2.40.100.10 930 1068 1.5E-44 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Gene3D G3DSA:3.30.470.20 202 446 3.3E-86 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Gene3D G3DSA:3.30.1360.40 816 888 1.7E-22 T 13-09-2016 IPR024946 Arginine repressor C-terminal-like domain PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 SUPERFAMILY SSF50891 632 755 3.57E-31 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 SMART SM00797 477 767 3.9E-164 T 13-09-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 PANTHER PTHR18866:SF91 1 547 1.0E-258 T 13-09-2016 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 PANTHER PTHR18866 1 547 1.0E-258 T 13-09-2016 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 PANTHER PTHR18866 1122 1212 1.0E-258 T 13-09-2016 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 PANTHER PTHR18866:SF91 1122 1212 1.0E-258 T 13-09-2016 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 5.8E-41 T 13-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 SUPERFAMILY SSF50891 930 1061 2.54E-25 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 319 1.6E-60 T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 SUPERFAMILY SSF52440 1 112 3.53E-43 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 SUPERFAMILY SSF51230 1135 1212 1.06E-18 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 SUPERFAMILY SSF56059 83 354 1.22E-68 T 13-09-2016 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Gene3D G3DSA:2.40.50.100 1141 1212 2.1E-21 T 13-09-2016 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Pfam PF00364 Biotin-requiring enzyme 1152 1211 1.5E-14 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 SUPERFAMILY SSF160467 816 906 1.44E-16 T 13-09-2016 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Pfam PF02626 Allophanate hydrolase subunit 2 478 749 2.8E-86 T 13-09-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1212 0.0 T 13-09-2016 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703|UniPathway: UPA00258|UniPathway: UPA00258 PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Pfam PF02682 Allophanate hydrolase subunit 1 816 1034 7.7E-47 T 13-09-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 Gene3D G3DSA:3.40.50.20 1 128 8.4E-45 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 455 761 3.3E-86 T 13-09-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PMA3_RS22640 506faf49aef5911135dfa22a4937ecf7 1214 SUPERFAMILY SSF51246 334 448 6.8E-35 T 13-09-2016 IPR011054 Rudiment single hybrid motif PMA3_RS20915 bdb1dbb8c6bddc56b137d54894be4c5d 297 Gene3D G3DSA:3.90.25.10 222 284 6.8E-29 T 13-09-2016 PMA3_RS20915 bdb1dbb8c6bddc56b137d54894be4c5d 297 Gene3D G3DSA:3.90.25.10 174 185 6.8E-29 T 13-09-2016 PMA3_RS20915 bdb1dbb8c6bddc56b137d54894be4c5d 297 PANTHER PTHR10491 1 297 1.5E-96 T 13-09-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family PMA3_RS20915 bdb1dbb8c6bddc56b137d54894be4c5d 297 Gene3D G3DSA:3.40.50.720 1 173 1.2E-32 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20915 bdb1dbb8c6bddc56b137d54894be4c5d 297 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 293 2.8E-99 T 13-09-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family PMA3_RS20915 bdb1dbb8c6bddc56b137d54894be4c5d 297 Pfam PF04321 RmlD substrate binding domain 1 294 2.7E-107 T 13-09-2016 IPR029903 RmlD-like substrate binding domain PMA3_RS20915 bdb1dbb8c6bddc56b137d54894be4c5d 297 SUPERFAMILY SSF51735 1 294 1.62E-101 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20915 bdb1dbb8c6bddc56b137d54894be4c5d 297 PANTHER PTHR10491:SF4 1 297 1.5E-96 T 13-09-2016 PMA3_RS28010 4e35ef3afc43232c12026154c4a86abe 650 Gene3D G3DSA:1.10.1060.10 221 350 8.6E-28 T 13-09-2016 PMA3_RS28010 4e35ef3afc43232c12026154c4a86abe 650 PANTHER PTHR11921:SF22 217 630 2.9E-167 T 13-09-2016 PMA3_RS28010 4e35ef3afc43232c12026154c4a86abe 650 PANTHER PTHR11921 217 630 2.9E-167 T 13-09-2016 PMA3_RS28010 4e35ef3afc43232c12026154c4a86abe 650 Pfam PF11982 Domain of unknown function (DUF3483) 4 220 3.9E-91 T 13-09-2016 IPR021872 Protein of unknown function DUF3483 PMA3_RS28010 4e35ef3afc43232c12026154c4a86abe 650 Pfam PF13183 4Fe-4S dicluster domain 242 332 2.0E-11 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS28010 4e35ef3afc43232c12026154c4a86abe 650 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 245 256 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS28010 4e35ef3afc43232c12026154c4a86abe 650 SUPERFAMILY SSF46548 220 348 2.62E-21 T 13-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PMA3_RS28010 4e35ef3afc43232c12026154c4a86abe 650 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 319 330 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS28010 4e35ef3afc43232c12026154c4a86abe 650 Pfam PF02754 Cysteine-rich domain 398 477 7.4E-4 T 13-09-2016 IPR004017 Cysteine-rich domain PMA3_RS28010 4e35ef3afc43232c12026154c4a86abe 650 Pfam PF02754 Cysteine-rich domain 521 607 5.1E-14 T 13-09-2016 IPR004017 Cysteine-rich domain PMA3_RS25500 32520acf05b9671d5691847893df66fe 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 25.509 T 13-09-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 PMA3_RS25500 32520acf05b9671d5691847893df66fe 152 SUPERFAMILY SSF74942 84 151 3.14E-18 T 13-09-2016 IPR028998 Ribosome maturation factor RimP, C-terminal PMA3_RS25500 32520acf05b9671d5691847893df66fe 152 Gene3D G3DSA:3.30.300.70 3 80 2.0E-31 T 13-09-2016 IPR028989 Ribosome maturation factor RimP, N-terminal PMA3_RS25500 32520acf05b9671d5691847893df66fe 152 Gene3D G3DSA:2.30.30.180 89 147 2.4E-14 T 13-09-2016 IPR028998 Ribosome maturation factor RimP, C-terminal PMA3_RS25500 32520acf05b9671d5691847893df66fe 152 PANTHER PTHR33867:SF1 1 152 5.1E-53 T 13-09-2016 PMA3_RS25500 32520acf05b9671d5691847893df66fe 152 PANTHER PTHR33867 1 152 5.1E-53 T 13-09-2016 PMA3_RS25500 32520acf05b9671d5691847893df66fe 152 SUPERFAMILY SSF75420 4 83 1.57E-24 T 13-09-2016 IPR028989 Ribosome maturation factor RimP, N-terminal PMA3_RS25500 32520acf05b9671d5691847893df66fe 152 Pfam PF02576 Putative ribosome maturation factor RimP 11 147 1.8E-50 T 13-09-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 PRINTS PR00169 Potassium channel signature 179 201 9.1E-32 T 13-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 PRINTS PR00169 Potassium channel signature 17 45 9.1E-32 T 13-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 PRINTS PR00169 Potassium channel signature 208 234 9.1E-32 T 13-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 PRINTS PR00169 Potassium channel signature 59 82 9.1E-32 T 13-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 PRINTS PR00169 Potassium channel signature 150 173 9.1E-32 T 13-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 PRINTS PR00169 Potassium channel signature 121 147 9.1E-32 T 13-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 PRINTS PR00169 Potassium channel signature 85 105 9.1E-32 T 13-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 SUPERFAMILY SSF81324 24 234 6.57E-52 T 13-09-2016 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 PANTHER PTHR11537 3 244 2.0E-99 T 13-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 Gene3D G3DSA:1.10.287.70 25 234 9.9E-52 T 13-09-2016 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 PANTHER PTHR11537:SF137 3 244 2.0E-99 T 13-09-2016 PMA3_RS21380 0344775ebcd71b6e3041193f930da63d 274 Pfam PF00520 Ion transport protein 26 236 2.0E-27 T 13-09-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 SUPERFAMILY SSF53697 10 551 4.17E-208 T 13-09-2016 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 Gene3D G3DSA:3.40.50.10490 13 101 1.4E-132 T 13-09-2016 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 Gene3D G3DSA:3.40.50.10490 297 510 1.4E-132 T 13-09-2016 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 528 40.107 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 487 501 2.4E-54 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 501 514 2.4E-54 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 153 172 2.4E-54 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 342 363 2.4E-54 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 469 487 2.4E-54 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 265 283 2.4E-54 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 Gene3D G3DSA:1.10.1390.10 511 551 7.0E-17 T 13-09-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 PANTHER PTHR11469 2 549 1.5E-274 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 269 282 - T 13-09-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 Pfam PF00342 Phosphoglucose isomerase 55 545 3.4E-192 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 501 518 - T 13-09-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS18185 1a7ca220f299bd098143bb804d4bda98 554 Gene3D G3DSA:3.40.50.10490 102 294 1.9E-73 T 13-09-2016 PMA3_RS07225 68f102a2f2f6a5fdfb24e87a1b8f86fb 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 263 1.5E-47 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS07225 68f102a2f2f6a5fdfb24e87a1b8f86fb 265 Gene3D G3DSA:3.90.226.10 8 263 8.1E-68 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07225 68f102a2f2f6a5fdfb24e87a1b8f86fb 265 SUPERFAMILY SSF52096 8 263 1.21E-67 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07225 68f102a2f2f6a5fdfb24e87a1b8f86fb 265 PANTHER PTHR11941:SF86 1 263 2.2E-87 T 13-09-2016 PMA3_RS07225 68f102a2f2f6a5fdfb24e87a1b8f86fb 265 PANTHER PTHR11941 1 263 2.2E-87 T 13-09-2016 PMA3_RS20115 8628049ed5b0dbcc09400ae7c95ac713 160 SUPERFAMILY SSF88946 2 80 2.51E-12 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20115 8628049ed5b0dbcc09400ae7c95ac713 160 Gene3D G3DSA:1.10.10.10 92 156 7.2E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20115 8628049ed5b0dbcc09400ae7c95ac713 160 PANTHER PTHR30173:SF30 1 158 8.9E-56 T 13-09-2016 PMA3_RS20115 8628049ed5b0dbcc09400ae7c95ac713 160 SUPERFAMILY SSF88659 75 156 6.32E-16 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20115 8628049ed5b0dbcc09400ae7c95ac713 160 Gene3D G3DSA:1.10.1740.10 2 66 4.3E-11 T 13-09-2016 PMA3_RS20115 8628049ed5b0dbcc09400ae7c95ac713 160 PANTHER PTHR30173 1 158 8.9E-56 T 13-09-2016 PMA3_RS20115 8628049ed5b0dbcc09400ae7c95ac713 160 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 153 2.2E-21 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20115 8628049ed5b0dbcc09400ae7c95ac713 160 Pfam PF04542 Sigma-70 region 2 2 66 7.4E-10 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20115 8628049ed5b0dbcc09400ae7c95ac713 160 Pfam PF08281 Sigma-70, region 4 98 150 3.7E-16 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS22945 7f1b97811a03a122f5da46957ad492f1 177 SUPERFAMILY SSF52540 7 172 2.09E-23 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22945 7f1b97811a03a122f5da46957ad492f1 177 PANTHER PTHR11603 1 170 5.0E-67 T 13-09-2016 PMA3_RS22945 7f1b97811a03a122f5da46957ad492f1 177 Gene3D G3DSA:3.40.50.300 2 169 2.3E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22945 7f1b97811a03a122f5da46957ad492f1 177 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 8 168 7.1E-57 T 13-09-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 PMA3_RS22945 7f1b97811a03a122f5da46957ad492f1 177 Pfam PF01202 Shikimate kinase 15 124 2.3E-5 T 13-09-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 PANTHER PTHR11632 3 450 1.1E-79 T 13-09-2016 PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 Gene3D G3DSA:3.50.50.60 2 235 2.1E-81 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 Gene3D G3DSA:3.50.50.60 395 451 2.1E-81 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.8E-5 T 13-09-2016 PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 403 425 5.8E-5 T 13-09-2016 PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 SUPERFAMILY SSF56425 251 395 1.13E-29 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 7 450 4.4E-86 T 13-09-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 SUPERFAMILY SSF51905 3 249 4.1E-48 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 SUPERFAMILY SSF51905 398 450 4.1E-48 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 Gene3D G3DSA:3.90.700.10 259 389 5.5E-28 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS18160 60931be088ac79e2ee06506b2c729a39 459 Pfam PF00890 FAD binding domain 7 438 8.0E-71 T 13-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PMA3_RS26345 24b25319bba1d5f1ca3d874bb7192c2f 454 PANTHER PTHR20852:SF7 1 453 6.9E-135 T 13-09-2016 PMA3_RS26345 24b25319bba1d5f1ca3d874bb7192c2f 454 PANTHER PTHR20852 1 453 6.9E-135 T 13-09-2016 PMA3_RS26345 24b25319bba1d5f1ca3d874bb7192c2f 454 Gene3D G3DSA:3.10.20.70 9 114 4.7E-4 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS26345 24b25319bba1d5f1ca3d874bb7192c2f 454 Pfam PF00120 Glutamine synthetase, catalytic domain 118 450 3.2E-105 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS26345 24b25319bba1d5f1ca3d874bb7192c2f 454 SUPERFAMILY SSF54368 11 114 1.7E-7 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS26345 24b25319bba1d5f1ca3d874bb7192c2f 454 SMART SM01230 117 372 9.8E-98 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS26345 24b25319bba1d5f1ca3d874bb7192c2f 454 Gene3D G3DSA:3.30.590.10 120 440 4.0E-93 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS26345 24b25319bba1d5f1ca3d874bb7192c2f 454 SUPERFAMILY SSF55931 119 451 5.3E-103 T 13-09-2016 PMA3_RS26345 24b25319bba1d5f1ca3d874bb7192c2f 454 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 253 268 - T 13-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS22260 af1d90e6a51f224c126d7c28059bbcc7 358 Pfam PF05359 Domain of Unknown Function (DUF748) 139 275 4.4E-12 T 13-09-2016 IPR008023 Protein of unknown function DUF748 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 Gene3D G3DSA:3.40.50.300 58 276 4.8E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 363 429 7.1E-8 T 13-09-2016 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 SUPERFAMILY SSF54211 254 268 9.1E-42 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 SUPERFAMILY SSF54211 302 454 9.1E-42 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 SMART SM00382 90 243 7.7E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 Pfam PF13481 AAA domain 70 221 4.0E-14 T 13-09-2016 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 PRINTS PR01874 DNA repair protein radA signature 123 140 4.2E-94 T 13-09-2016 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 PRINTS PR01874 DNA repair protein radA signature 82 110 4.2E-94 T 13-09-2016 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 PRINTS PR01874 DNA repair protein radA signature 10 34 4.2E-94 T 13-09-2016 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 PRINTS PR01874 DNA repair protein radA signature 212 240 4.2E-94 T 13-09-2016 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 PRINTS PR01874 DNA repair protein radA signature 247 273 4.2E-94 T 13-09-2016 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 PRINTS PR01874 DNA repair protein radA signature 173 197 4.2E-94 T 13-09-2016 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 PRINTS PR01874 DNA repair protein radA signature 321 344 4.2E-94 T 13-09-2016 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 PANTHER PTHR32472 1 455 2.0E-221 T 13-09-2016 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 Gene3D G3DSA:3.30.230.10 283 455 2.2E-37 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 450 6.5E-203 T 13-09-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PMA3_RS03050 ef6c57cf2528be1ba8e1c0b9d76f4003 455 SUPERFAMILY SSF52540 68 291 7.14E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15070 c7fecd85fee59dc71fbfc2e0e0ee51a0 326 Gene3D G3DSA:1.10.8.300 207 322 6.7E-39 T 13-09-2016 PMA3_RS15070 c7fecd85fee59dc71fbfc2e0e0ee51a0 326 PANTHER PTHR11603:SF148 1 324 3.7E-127 T 13-09-2016 PMA3_RS15070 c7fecd85fee59dc71fbfc2e0e0ee51a0 326 SUPERFAMILY SSF52540 8 300 1.59E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15070 c7fecd85fee59dc71fbfc2e0e0ee51a0 326 PANTHER PTHR11603 1 324 3.7E-127 T 13-09-2016 PMA3_RS15070 c7fecd85fee59dc71fbfc2e0e0ee51a0 326 Gene3D G3DSA:3.40.50.300 19 185 3.5E-43 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15070 c7fecd85fee59dc71fbfc2e0e0ee51a0 326 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 169 6.2E-62 T 13-09-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PMA3_RS15070 c7fecd85fee59dc71fbfc2e0e0ee51a0 326 PIRSF PIRSF002849 1 326 5.9E-123 T 13-09-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted PMA3_RS11710 cc7a9e9777863e757a6658148a32425b 328 Gene3D G3DSA:2.130.10.140 48 249 2.4E-30 T 13-09-2016 PMA3_RS11710 cc7a9e9777863e757a6658148a32425b 328 SUPERFAMILY SSF110296 48 268 4.05E-36 T 13-09-2016 PMA3_RS11710 cc7a9e9777863e757a6658148a32425b 328 Pfam PF14870 Photosynthesis system II assembly factor YCF48 54 159 1.1E-8 T 13-09-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 Gene3D G3DSA:1.10.10.60 242 289 1.8E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 Pfam PF12833 Helix-turn-helix domain 211 289 2.6E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 Gene3D G3DSA:1.10.10.60 183 241 3.4E-18 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 SMART SM00342 205 288 8.1E-32 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 SUPERFAMILY SSF46689 241 289 8.96E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 PANTHER PTHR11019 10 148 8.4E-85 T 13-09-2016 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 PANTHER PTHR11019 174 296 8.4E-85 T 13-09-2016 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 SUPERFAMILY SSF46689 188 239 1.97E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 4.1E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 4.1E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 Gene3D G3DSA:2.60.120.10 25 111 6.1E-7 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 PANTHER PTHR11019:SF123 10 148 8.4E-85 T 13-09-2016 PMA3_RS13400 bc529ac3624fed5e8470133cfed19c70 301 PANTHER PTHR11019:SF123 174 296 8.4E-85 T 13-09-2016 PMA3_RS22940 1e6ec713f253696a6c76221d5d043c3d 450 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 450 1.5E-157 T 13-09-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PMA3_RS22940 1e6ec713f253696a6c76221d5d043c3d 450 PANTHER PTHR30354 5 450 4.4E-229 T 13-09-2016 PMA3_RS22940 1e6ec713f253696a6c76221d5d043c3d 450 PIRSF PIRSF002746 5 450 1.6E-158 T 13-09-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PMA3_RS22940 1e6ec713f253696a6c76221d5d043c3d 450 PANTHER PTHR30354:SF1 5 450 4.4E-229 T 13-09-2016 PMA3_RS22940 1e6ec713f253696a6c76221d5d043c3d 450 Pfam PF02447 GntP family permease 10 448 3.5E-175 T 13-09-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PMA3_RS28890 1c555c982871c3dd4a2c8c68adf54964 454 PANTHER PTHR11986:SF81 34 453 1.9E-169 T 13-09-2016 PMA3_RS28890 1c555c982871c3dd4a2c8c68adf54964 454 Gene3D G3DSA:3.40.640.10 71 344 1.7E-80 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS28890 1c555c982871c3dd4a2c8c68adf54964 454 PANTHER PTHR11986 34 453 1.9E-169 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS28890 1c555c982871c3dd4a2c8c68adf54964 454 Gene3D G3DSA:3.90.1150.10 8 69 1.7E-51 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS28890 1c555c982871c3dd4a2c8c68adf54964 454 Gene3D G3DSA:3.90.1150.10 345 447 1.7E-51 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS28890 1c555c982871c3dd4a2c8c68adf54964 454 PIRSF PIRSF000521 36 447 8.3E-27 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS28890 1c555c982871c3dd4a2c8c68adf54964 454 Pfam PF00202 Aminotransferase class-III 34 445 4.3E-104 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS28890 1c555c982871c3dd4a2c8c68adf54964 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS28890 1c555c982871c3dd4a2c8c68adf54964 454 SUPERFAMILY SSF53383 9 446 1.27E-126 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS05280 db3e963dc2c3ba08f6d49e79ff6d8367 364 Gene3D G3DSA:3.40.50.1100 48 143 6.4E-26 T 13-09-2016 PMA3_RS05280 db3e963dc2c3ba08f6d49e79ff6d8367 364 Gene3D G3DSA:3.40.50.1100 144 335 1.1E-34 T 13-09-2016 PMA3_RS05280 db3e963dc2c3ba08f6d49e79ff6d8367 364 PANTHER PTHR10314 1 339 4.7E-191 T 13-09-2016 PMA3_RS05280 db3e963dc2c3ba08f6d49e79ff6d8367 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 316 8.2E-44 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS05280 db3e963dc2c3ba08f6d49e79ff6d8367 364 PANTHER PTHR10314:SF126 1 339 4.7E-191 T 13-09-2016 PMA3_RS05280 db3e963dc2c3ba08f6d49e79ff6d8367 364 SUPERFAMILY SSF53686 11 335 4.71E-69 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS03010 95059b47b855b0a392e9b5a6adb1bf5f 412 PANTHER PTHR23513:SF9 1 409 1.3E-136 T 13-09-2016 PMA3_RS03010 95059b47b855b0a392e9b5a6adb1bf5f 412 PANTHER PTHR23513 1 409 1.3E-136 T 13-09-2016 PMA3_RS03010 95059b47b855b0a392e9b5a6adb1bf5f 412 Pfam PF05977 Transmembrane secretion effector 12 392 5.0E-35 T 13-09-2016 IPR010290 Transmembrane secretion effector PMA3_RS03010 95059b47b855b0a392e9b5a6adb1bf5f 412 Gene3D G3DSA:1.20.1250.20 228 397 4.8E-13 T 13-09-2016 PMA3_RS03010 95059b47b855b0a392e9b5a6adb1bf5f 412 Gene3D G3DSA:1.20.1250.20 12 192 1.8E-18 T 13-09-2016 PMA3_RS03010 95059b47b855b0a392e9b5a6adb1bf5f 412 SUPERFAMILY SSF103473 11 402 2.35E-42 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS19370 f2b31af3f4eade969ea52e7ccafa0083 188 Pfam PF01817 Chorismate mutase type II 36 104 3.3E-8 T 13-09-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PMA3_RS19370 f2b31af3f4eade969ea52e7ccafa0083 188 SMART SM00830 36 106 6.3E-12 T 13-09-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PMA3_RS19370 f2b31af3f4eade969ea52e7ccafa0083 188 Gene3D G3DSA:1.20.59.10 36 103 1.3E-8 T 13-09-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PMA3_RS19370 f2b31af3f4eade969ea52e7ccafa0083 188 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 31 143 2.0E-32 T 13-09-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PMA3_RS19370 f2b31af3f4eade969ea52e7ccafa0083 188 SUPERFAMILY SSF48600 34 184 2.14E-37 T 13-09-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PMA3_RS19370 f2b31af3f4eade969ea52e7ccafa0083 188 PIRSF PIRSF026640 7 187 3.0E-54 T 13-09-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 SMART SM00278 552 571 70.0 T 13-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 SMART SM00278 584 603 5.8 T 13-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 Pfam PF14520 Helix-hairpin-helix domain 554 602 1.5E-9 T 13-09-2016 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 Pfam PF02151 UvrB/uvrC motif 206 237 1.6E-7 T 13-09-2016 IPR001943 UVR domain GO:0005515 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 585 2.3E-185 T 13-09-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 PANTHER PTHR30562:SF1 9 604 6.5E-266 T 13-09-2016 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 383 538 3.4E-51 T 13-09-2016 IPR001162 UvrC family homology region PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 PANTHER PTHR30562 9 604 6.5E-266 T 13-09-2016 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 Gene3D G3DSA:4.10.860.10 182 242 1.5E-18 T 13-09-2016 IPR001943 UVR domain GO:0005515 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 Gene3D G3DSA:3.40.1440.10 18 97 2.2E-7 T 13-09-2016 IPR027299 GIY-YIG domain PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 SUPERFAMILY SSF46600 189 242 1.27E-12 T 13-09-2016 IPR001943 UVR domain GO:0005515 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 SUPERFAMILY SSF82771 17 100 1.29E-21 T 13-09-2016 IPR000305 GIY-YIG nuclease superfamily PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 SMART SM00465 17 98 4.1E-23 T 13-09-2016 IPR000305 GIY-YIG nuclease superfamily PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 Gene3D G3DSA:1.10.150.20 551 605 2.2E-22 T 13-09-2016 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 603 29.515 T 13-09-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 Pfam PF01541 GIY-YIG catalytic domain 19 93 7.2E-10 T 13-09-2016 IPR000305 GIY-YIG nuclease superfamily PMA3_RS12425 84222946f839ba0abb27be25f54a929b 607 SUPERFAMILY SSF47781 518 605 1.65E-22 T 13-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PMA3_RS13260 93ab762f9ad6e0fe415bdc6aeeb95be6 174 Pfam PF13521 AAA domain 5 160 4.9E-28 T 13-09-2016 PMA3_RS13260 93ab762f9ad6e0fe415bdc6aeeb95be6 174 Gene3D G3DSA:3.40.50.300 1 165 5.6E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13260 93ab762f9ad6e0fe415bdc6aeeb95be6 174 SUPERFAMILY SSF52540 2 165 7.14E-24 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13260 93ab762f9ad6e0fe415bdc6aeeb95be6 174 PANTHER PTHR37512 1 174 5.6E-79 T 13-09-2016 PMA3_RS27705 aadc320779c4f242a937c3b2b98de45d 264 PANTHER PTHR23088 1 264 1.6E-76 T 13-09-2016 PMA3_RS27705 aadc320779c4f242a937c3b2b98de45d 264 Gene3D G3DSA:3.60.110.10 1 263 9.6E-79 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS27705 aadc320779c4f242a937c3b2b98de45d 264 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 140 160 - T 13-09-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site PMA3_RS27705 aadc320779c4f242a937c3b2b98de45d 264 SUPERFAMILY SSF56317 1 264 3.14E-77 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS27705 aadc320779c4f242a937c3b2b98de45d 264 Pfam PF00795 Carbon-nitrogen hydrolase 2 240 1.2E-57 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS23585 2664d9b9681e99aaf5320d009f7226c9 133 Pfam PF13840 ACT domain 71 127 1.3E-12 T 13-09-2016 IPR027795 GATS-like ACT domain PMA3_RS23585 2664d9b9681e99aaf5320d009f7226c9 133 Pfam PF10000 ACT domain 2 69 4.3E-24 T 13-09-2016 IPR018717 Domain of unknown function DUF2241 PMA3_RS23585 2664d9b9681e99aaf5320d009f7226c9 133 Gene3D G3DSA:3.30.2130.10 1 129 1.3E-53 T 13-09-2016 PMA3_RS23585 2664d9b9681e99aaf5320d009f7226c9 133 SUPERFAMILY SSF55021 3 65 1.88E-15 T 13-09-2016 PMA3_RS23585 2664d9b9681e99aaf5320d009f7226c9 133 PANTHER PTHR39199:SF1 1 130 4.1E-54 T 13-09-2016 PMA3_RS23585 2664d9b9681e99aaf5320d009f7226c9 133 PANTHER PTHR39199 1 130 4.1E-54 T 13-09-2016 PMA3_RS23585 2664d9b9681e99aaf5320d009f7226c9 133 SUPERFAMILY SSF55021 70 128 1.37E-19 T 13-09-2016 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 Gene3D G3DSA:3.60.40.10 2 228 6.5E-43 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 SMART SM00332 2 226 2.8E-5 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 378 390 - T 13-09-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 SUPERFAMILY SSF56112 258 511 1.58E-48 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 SUPERFAMILY SSF81606 4 229 1.57E-42 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 PANTHER PTHR24348 303 512 2.4E-91 T 13-09-2016 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 Pfam PF13672 Protein phosphatase 2C 12 184 3.6E-7 T 13-09-2016 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 SMART SM00331 22 228 1.1E-6 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 PANTHER PTHR24348:SF23 303 512 2.4E-91 T 13-09-2016 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 Gene3D G3DSA:1.10.510.10 322 520 1.0E-36 T 13-09-2016 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 Pfam PF00069 Protein kinase domain 262 461 2.9E-29 T 13-09-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PMA3_RS20410 8e4f7ed323dd1fbecc3f10a97d6bc304 556 SMART SM00220 261 510 4.0E-13 T 13-09-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 SUPERFAMILY SSF54373 221 308 4.32E-21 T 13-09-2016 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 PANTHER PTHR13847 1 363 1.1E-97 T 13-09-2016 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 Gene3D G3DSA:3.50.50.60 141 220 4.3E-55 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 Gene3D G3DSA:3.50.50.60 308 363 4.3E-55 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 Gene3D G3DSA:3.50.50.60 2 84 4.3E-55 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 7 351 4.7E-80 T 13-09-2016 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 UniPathway: UPA00060 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 Gene3D G3DSA:3.30.9.10 221 304 3.6E-5 T 13-09-2016 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 Gene3D G3DSA:3.30.9.10 109 140 3.6E-5 T 13-09-2016 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 SUPERFAMILY SSF51905 308 363 7.77E-46 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 SUPERFAMILY SSF51905 6 221 7.77E-46 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 PANTHER PTHR13847:SF180 1 363 1.1E-97 T 13-09-2016 PMA3_RS03270 c3e280048888be5235bf0693cc469d65 366 Pfam PF01266 FAD dependent oxidoreductase 7 346 6.4E-64 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 Gene3D G3DSA:1.10.3860.10 9 406 9.2E-111 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 PANTHER PTHR11958:SF49 8 424 1.1E-201 T 13-09-2016 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 3.8E-23 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 3.8E-23 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 3.8E-23 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 3.8E-23 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 3.8E-23 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 3.8E-23 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 Pfam PF00375 Sodium:dicarboxylate symporter family 11 401 1.4E-105 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 SUPERFAMILY SSF118215 11 402 4.58E-113 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19170 3f63348e968fe03c5397b3b6cb8b5c1a 439 PANTHER PTHR11958 8 424 1.1E-201 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS01685 1741b8f6fe20d3e0f53aefe954b0983e 256 PANTHER PTHR13696 4 255 6.9E-111 T 13-09-2016 PMA3_RS01685 1741b8f6fe20d3e0f53aefe954b0983e 256 Pfam PF13614 AAA domain 5 182 6.1E-38 T 13-09-2016 IPR025669 AAA domain PMA3_RS01685 1741b8f6fe20d3e0f53aefe954b0983e 256 Gene3D G3DSA:3.40.50.300 3 253 3.9E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01685 1741b8f6fe20d3e0f53aefe954b0983e 256 PANTHER PTHR13696:SF66 4 255 6.9E-111 T 13-09-2016 PMA3_RS01685 1741b8f6fe20d3e0f53aefe954b0983e 256 SUPERFAMILY SSF52540 1 255 2.0E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 PANTHER PTHR26402 5 217 4.4E-67 T 13-09-2016 PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.2E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.2E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.2E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 Pfam PF00072 Response regulator receiver domain 8 118 1.8E-24 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 SMART SM00421 151 208 1.0E-18 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 Gene3D G3DSA:1.10.10.10 124 215 6.9E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 SUPERFAMILY SSF46894 141 214 1.29E-17 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 SMART SM00448 5 118 1.2E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 Gene3D G3DSA:3.40.50.2300 5 123 4.0E-32 T 13-09-2016 PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 SUPERFAMILY SSF52172 6 133 3.13E-31 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 PANTHER PTHR26402:SF151 5 217 4.4E-67 T 13-09-2016 PMA3_RS11965 33b461c1e400966e73ea075f1ddd1ea9 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 206 3.3E-14 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 Gene3D G3DSA:1.10.510.10 274 376 7.9E-12 T 13-09-2016 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 PANTHER PTHR23155 26 192 9.6E-57 T 13-09-2016 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 PANTHER PTHR23155 292 340 9.6E-57 T 13-09-2016 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 Pfam PF13855 Leucine rich repeat 105 162 1.3E-7 T 13-09-2016 IPR001611 Leucine-rich repeat GO:0005515 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 Pfam PF07714 Protein tyrosine kinase 205 382 4.1E-15 T 13-09-2016 IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain GO:0004672|GO:0006468 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SUPERFAMILY SSF56112 200 434 1.89E-26 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 PANTHER PTHR23155:SF644 26 192 9.6E-57 T 13-09-2016 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 PANTHER PTHR23155:SF644 292 340 9.6E-57 T 13-09-2016 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 Gene3D G3DSA:3.80.10.10 10 196 3.2E-39 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 211 237 - T 13-09-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 Gene3D G3DSA:3.30.200.20 197 273 5.8E-9 T 13-09-2016 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SMART SM00369 58 81 4.3 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SMART SM00369 127 149 7.2 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SMART SM00369 102 126 35.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SMART SM00369 38 57 80.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SMART SM00369 150 172 390.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SUPERFAMILY SSF52058 10 190 3.63E-36 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SMART SM00364 103 122 21.0 T 13-09-2016 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SMART SM00364 58 77 100.0 T 13-09-2016 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SMART SM00364 35 54 22.0 T 13-09-2016 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SMART SM00364 126 145 28.0 T 13-09-2016 PMA3_RS08230 c19397b59a8ca2f972a4a3caa77a91d8 437 SMART SM00364 149 168 38.0 T 13-09-2016 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 Gene3D G3DSA:1.10.300.10 103 195 6.5E-37 T 13-09-2016 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 Pfam PF00709 Adenylosuccinate synthetase 5 422 6.0E-175 T 13-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 Gene3D G3DSA:3.90.170.10 267 424 2.3E-66 T 13-09-2016 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 Gene3D G3DSA:3.40.440.10 3 94 2.3E-70 T 13-09-2016 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 Gene3D G3DSA:3.40.440.10 196 266 2.3E-70 T 13-09-2016 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 13-09-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 13-09-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 SUPERFAMILY SSF52540 3 428 1.38E-174 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 PANTHER PTHR11846 1 427 2.4E-246 T 13-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 428 1.9E-181 T 13-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 213.96 T 13-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PMA3_RS02085 338fd62ee4637aa07296f0b3462312cc 429 SMART SM00788 4 423 3.3E-290 T 13-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 Gene3D G3DSA:2.160.20.60 1211 1466 2.3E-93 T 13-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 PANTHER PTHR11938:SF1 4 1478 0.0 T 13-09-2016 PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 Pfam PF04898 Glutamate synthase central domain 458 736 5.6E-103 T 13-09-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 SUPERFAMILY SSF69336 1212 1466 7.19E-88 T 13-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 Pfam PF01645 Conserved region in glutamate synthase 792 1156 3.4E-148 T 13-09-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 Pfam PF00310 Glutamine amidotransferases class-II 15 427 2.6E-171 T 13-09-2016 IPR017932 Glutamine amidotransferase type 2 domain PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 SUPERFAMILY SSF56235 15 431 5.06E-141 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 SUPERFAMILY SSF51395 444 1187 8.79E-252 T 13-09-2016 PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 Gene3D G3DSA:3.20.20.70 438 776 3.2E-96 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 Gene3D G3DSA:3.20.20.70 808 1190 4.4E-163 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 Gene3D G3DSA:3.60.20.10 15 436 6.6E-163 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 PANTHER PTHR11938 4 1478 0.0 T 13-09-2016 PMA3_RS01525 20ec7436cd9fda56fe1f8187d7eba2bd 1481 Pfam PF01493 GXGXG motif 1236 1422 9.6E-78 T 13-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 SUPERFAMILY SSF52317 10 207 1.74E-37 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 Gene3D G3DSA:1.10.10.60 232 277 8.5E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 Pfam PF01965 DJ-1/PfpI family 51 179 2.7E-6 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 PANTHER PTHR11019:SF61 121 331 7.9E-56 T 13-09-2016 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 Pfam PF12833 Helix-turn-helix domain 247 326 5.9E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 Gene3D G3DSA:3.40.50.880 11 231 1.5E-37 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 308 324 4.8E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 293 308 4.8E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 SMART SM00342 241 324 4.3E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 SUPERFAMILY SSF46689 277 328 1.88E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 SUPERFAMILY SSF46689 226 275 1.88E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 Gene3D G3DSA:1.10.10.60 278 328 5.3E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 PANTHER PTHR11019 121 331 7.9E-56 T 13-09-2016 PMA3_RS04020 9aacc24cb5a3cff61d908f7a7b1cfea5 331 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 278 320 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS16285 b296582c0f5c82362fd3da1e4de7868d 613 PANTHER PTHR41248 1 613 6.6E-136 T 13-09-2016 PMA3_RS16285 b296582c0f5c82362fd3da1e4de7868d 613 Pfam PF00092 von Willebrand factor type A domain 427 574 5.2E-8 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS16285 b296582c0f5c82362fd3da1e4de7868d 613 PANTHER PTHR41248:SF1 1 613 6.6E-136 T 13-09-2016 PMA3_RS16285 b296582c0f5c82362fd3da1e4de7868d 613 SUPERFAMILY SSF53300 424 609 1.63E-19 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS16285 b296582c0f5c82362fd3da1e4de7868d 613 Gene3D G3DSA:3.40.50.410 426 577 1.3E-10 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS16285 b296582c0f5c82362fd3da1e4de7868d 613 SMART SM00327 421 604 2.2E-15 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS00070 ade32d4336448a301892f8d7146e9405 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 15 293 1.7E-105 T 13-09-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 PMA3_RS00070 ade32d4336448a301892f8d7146e9405 299 PANTHER PTHR11048:SF3 14 293 1.4E-83 T 13-09-2016 PMA3_RS00070 ade32d4336448a301892f8d7146e9405 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 68 90 - T 13-09-2016 IPR030470 UbiA prenyltransferase conserved site PMA3_RS00070 ade32d4336448a301892f8d7146e9405 299 Pfam PF01040 UbiA prenyltransferase family 30 282 4.8E-64 T 13-09-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PMA3_RS00070 ade32d4336448a301892f8d7146e9405 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 13 294 20.155 T 13-09-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 PMA3_RS00070 ade32d4336448a301892f8d7146e9405 299 PANTHER PTHR11048 14 293 1.4E-83 T 13-09-2016 PMA3_RS06475 872828d8e85fb8d9aa5a57b698112b0a 410 PANTHER PTHR30097:SF4 41 410 2.0E-119 T 13-09-2016 PMA3_RS06475 872828d8e85fb8d9aa5a57b698112b0a 410 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 86 397 3.3E-53 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS06475 872828d8e85fb8d9aa5a57b698112b0a 410 Gene3D G3DSA:2.40.50.100 111 144 2.7E-15 T 13-09-2016 PMA3_RS06475 872828d8e85fb8d9aa5a57b698112b0a 410 Gene3D G3DSA:2.40.50.100 220 251 2.7E-15 T 13-09-2016 PMA3_RS06475 872828d8e85fb8d9aa5a57b698112b0a 410 PANTHER PTHR30097 41 410 2.0E-119 T 13-09-2016 PMA3_RS06475 872828d8e85fb8d9aa5a57b698112b0a 410 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 97 325 1.1E-44 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS06475 872828d8e85fb8d9aa5a57b698112b0a 410 SUPERFAMILY SSF111369 108 330 6.15E-27 T 13-09-2016 PMA3_RS08510 5719679521987e163c4e9489f690f1fd 168 SMART SM00738 7 106 1.9E-22 T 13-09-2016 IPR006645 NusG, N-terminal GO:0006355 PMA3_RS08510 5719679521987e163c4e9489f690f1fd 168 Gene3D G3DSA:2.30.30.30 109 167 6.1E-5 T 13-09-2016 IPR014722 Ribosomal protein L2 domain 2 PMA3_RS08510 5719679521987e163c4e9489f690f1fd 168 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 10 165 7.4E-55 T 13-09-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 PMA3_RS08510 5719679521987e163c4e9489f690f1fd 168 Gene3D G3DSA:3.30.70.940 9 108 1.8E-21 T 13-09-2016 IPR006645 NusG, N-terminal GO:0006355 PMA3_RS08510 5719679521987e163c4e9489f690f1fd 168 PANTHER PTHR30265:SF3 9 167 9.1E-30 T 13-09-2016 PMA3_RS08510 5719679521987e163c4e9489f690f1fd 168 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 7 168 42.476 T 13-09-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 PMA3_RS08510 5719679521987e163c4e9489f690f1fd 168 SUPERFAMILY SSF82679 8 108 6.15E-29 T 13-09-2016 IPR006645 NusG, N-terminal GO:0006355 PMA3_RS08510 5719679521987e163c4e9489f690f1fd 168 PANTHER PTHR30265 9 167 9.1E-30 T 13-09-2016 PMA3_RS08510 5719679521987e163c4e9489f690f1fd 168 Pfam PF02357 Transcription termination factor nusG 9 102 7.6E-22 T 13-09-2016 IPR006645 NusG, N-terminal GO:0006355 PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 PANTHER PTHR30537 2 299 3.6E-142 T 13-09-2016 PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 Gene3D G3DSA:3.40.190.10 181 265 1.5E-36 T 13-09-2016 PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 PANTHER PTHR30537:SF15 2 299 3.6E-142 T 13-09-2016 PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 SUPERFAMILY SSF53850 94 298 2.35E-37 T 13-09-2016 PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 SUPERFAMILY SSF46785 3 117 8.39E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 Gene3D G3DSA:1.10.10.10 4 84 2.5E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 7.9E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 7.9E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 7.9E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 Pfam PF03466 LysR substrate binding domain 94 294 2.2E-39 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 Gene3D G3DSA:3.40.190.10 98 180 9.4E-27 T 13-09-2016 PMA3_RS02215 8f7802e26477f30c040419d44f5e2e59 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 1.1E-20 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23135 5562280530d21e255d19df5828c2402e 175 Gene3D G3DSA:1.10.10.10 106 155 6.9E-12 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23135 5562280530d21e255d19df5828c2402e 175 Pfam PF08281 Sigma-70, region 4 115 157 9.7E-14 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS23135 5562280530d21e255d19df5828c2402e 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 160 8.6E-25 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS23135 5562280530d21e255d19df5828c2402e 175 PANTHER PTHR30173 6 162 2.5E-28 T 13-09-2016 PMA3_RS23135 5562280530d21e255d19df5828c2402e 175 SUPERFAMILY SSF88946 4 90 5.89E-15 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS23135 5562280530d21e255d19df5828c2402e 175 Pfam PF04542 Sigma-70 region 2 17 74 2.8E-11 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS23135 5562280530d21e255d19df5828c2402e 175 SUPERFAMILY SSF88659 94 160 1.35E-12 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS23135 5562280530d21e255d19df5828c2402e 175 Gene3D G3DSA:1.10.1740.10 3 75 6.2E-14 T 13-09-2016 PMA3_RS01215 383a63e4f6f430cbf2760323cf402122 1073 PANTHER PTHR38434:SF1 14 552 1.9E-129 T 13-09-2016 PMA3_RS01215 383a63e4f6f430cbf2760323cf402122 1073 PANTHER PTHR38434:SF1 645 1066 1.9E-129 T 13-09-2016 PMA3_RS01215 383a63e4f6f430cbf2760323cf402122 1073 Pfam PF10101 Predicted membrane protein (DUF2339) 162 510 5.7E-105 T 13-09-2016 IPR019286 Protein of unknown function DUF2339, transmembrane PMA3_RS01215 383a63e4f6f430cbf2760323cf402122 1073 Pfam PF10101 Predicted membrane protein (DUF2339) 531 1051 9.8E-48 T 13-09-2016 IPR019286 Protein of unknown function DUF2339, transmembrane PMA3_RS01215 383a63e4f6f430cbf2760323cf402122 1073 PANTHER PTHR38434 14 552 1.9E-129 T 13-09-2016 PMA3_RS01215 383a63e4f6f430cbf2760323cf402122 1073 PANTHER PTHR38434 645 1066 1.9E-129 T 13-09-2016 PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 1289 1388 1.0E-13 T 13-09-2016 IPR032871 AHH domain-containing protein PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 PANTHER PTHR32305:SF6 1024 1307 5.3E-175 T 13-09-2016 PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 PANTHER PTHR32305 1024 1307 5.3E-175 T 13-09-2016 PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1202 1278 5.1E-27 T 13-09-2016 IPR022385 Rhs repeat-associated core GO:0097264 PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 PANTHER PTHR32305:SF6 18 995 5.3E-175 T 13-09-2016 PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 PRINTS PR00394 RHS protein signature 1169 1189 4.9E-14 T 13-09-2016 IPR001826 RHS protein PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 PRINTS PR00394 RHS protein signature 1223 1243 4.9E-14 T 13-09-2016 IPR001826 RHS protein PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 PRINTS PR00394 RHS protein signature 1246 1265 4.9E-14 T 13-09-2016 IPR001826 RHS protein PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 Pfam PF03527 RHS protein 1176 1209 1.7E-17 T 13-09-2016 IPR001826 RHS protein PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 698 739 4.5E-5 T 13-09-2016 IPR006530 YD repeat PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 679 717 1.8E-5 T 13-09-2016 IPR006530 YD repeat PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 530 569 5.1E-7 T 13-09-2016 IPR006530 YD repeat PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 740 780 2.2E-5 T 13-09-2016 IPR006530 YD repeat PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 862 897 7.6E-6 T 13-09-2016 IPR006530 YD repeat PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 812 841 0.0032 T 13-09-2016 IPR006530 YD repeat PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 657 697 0.003 T 13-09-2016 IPR006530 YD repeat PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 584 612 9.1E-4 T 13-09-2016 IPR006530 YD repeat PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 PANTHER PTHR32305 18 995 5.3E-175 T 13-09-2016 PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 Pfam PF05488 PAAR motif 106 150 2.8E-8 T 13-09-2016 IPR008727 PAAR motif PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 Pfam PF05488 PAAR motif 75 139 6.5E-11 T 13-09-2016 IPR008727 PAAR motif PMA3_RS11395 720fed1210a53212c7c385531b4a6073 1408 Pfam PF05593 RHS Repeat 862 897 7.2E-7 T 13-09-2016 IPR031325 RHS repeat PMA3_RS18905 538381988043f8853df482995fe0fac3 558 PANTHER PTHR23508:SF7 458 557 3.2E-230 T 13-09-2016 PMA3_RS18905 538381988043f8853df482995fe0fac3 558 Pfam PF00083 Sugar (and other) transporter 460 555 1.6E-6 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS18905 538381988043f8853df482995fe0fac3 558 Pfam PF00083 Sugar (and other) transporter 26 239 2.3E-30 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS18905 538381988043f8853df482995fe0fac3 558 Gene3D G3DSA:1.20.1250.20 456 553 7.5E-28 T 13-09-2016 PMA3_RS18905 538381988043f8853df482995fe0fac3 558 Gene3D G3DSA:1.20.1250.20 22 224 1.4E-21 T 13-09-2016 PMA3_RS18905 538381988043f8853df482995fe0fac3 558 Gene3D G3DSA:1.20.1250.20 253 341 7.5E-28 T 13-09-2016 PMA3_RS18905 538381988043f8853df482995fe0fac3 558 PANTHER PTHR23508 458 557 3.2E-230 T 13-09-2016 PMA3_RS18905 538381988043f8853df482995fe0fac3 558 PANTHER PTHR23508 18 343 3.2E-230 T 13-09-2016 PMA3_RS18905 538381988043f8853df482995fe0fac3 558 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS18905 538381988043f8853df482995fe0fac3 558 SUPERFAMILY SSF103473 455 555 7.06E-13 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS18905 538381988043f8853df482995fe0fac3 558 PANTHER PTHR23508:SF7 18 343 3.2E-230 T 13-09-2016 PMA3_RS18905 538381988043f8853df482995fe0fac3 558 SUPERFAMILY SSF103473 19 336 1.31E-53 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 Pfam PF13361 UvrD-like helicase C-terminal domain 279 618 3.9E-76 T 13-09-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 273 1.1E-73 T 13-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 Gene3D G3DSA:1.10.10.160 116 192 1.6E-22 T 13-09-2016 IPR013986 DExx box DNA helicase domain PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 PANTHER PTHR11070:SF7 8 727 5.6E-243 T 13-09-2016 PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 SUPERFAMILY SSF52540 9 644 1.46E-184 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 Gene3D G3DSA:1.10.486.10 390 543 5.7E-49 T 13-09-2016 PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 Gene3D G3DSA:3.40.50.300 193 287 3.2E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 Gene3D G3DSA:3.40.50.300 8 112 3.2E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 Gene3D G3DSA:3.40.50.300 288 389 3.8E-73 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 Gene3D G3DSA:3.40.50.300 554 644 3.8E-73 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29850 59526cb0c00d51eb79b1f606dcef76db 727 PANTHER PTHR11070 8 727 5.6E-243 T 13-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PMA3_RS19155 25c3719a64e78b9089ee0192e03995f6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.6E-14 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19155 25c3719a64e78b9089ee0192e03995f6 303 SUPERFAMILY SSF46785 1 112 2.33E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19155 25c3719a64e78b9089ee0192e03995f6 303 PANTHER PTHR30126 3 295 6.1E-56 T 13-09-2016 PMA3_RS19155 25c3719a64e78b9089ee0192e03995f6 303 Pfam PF03466 LysR substrate binding domain 95 291 1.1E-34 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS19155 25c3719a64e78b9089ee0192e03995f6 303 Gene3D G3DSA:3.40.190.10 178 263 1.0E-17 T 13-09-2016 PMA3_RS19155 25c3719a64e78b9089ee0192e03995f6 303 Gene3D G3DSA:1.10.10.10 3 89 3.0E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19155 25c3719a64e78b9089ee0192e03995f6 303 Gene3D G3DSA:3.40.190.10 95 177 1.6E-15 T 13-09-2016 PMA3_RS19155 25c3719a64e78b9089ee0192e03995f6 303 SUPERFAMILY SSF53850 92 296 1.54E-34 T 13-09-2016 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 Gene3D G3DSA:3.40.1160.10 4 264 1.9E-57 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 PIRSF PIRSF000729 4 372 1.7E-129 T 13-09-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 13-09-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 36.487 T 13-09-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 3.1E-53 T 13-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 3.1E-53 T 13-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 3.1E-53 T 13-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 3.1E-53 T 13-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 3.1E-53 T 13-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 PANTHER PTHR11063:SF6 9 372 6.4E-116 T 13-09-2016 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 PANTHER PTHR11063 9 372 6.4E-116 T 13-09-2016 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 Pfam PF00696 Amino acid kinase family 10 238 8.8E-43 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 SUPERFAMILY SSF53633 9 261 4.06E-68 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 Pfam PF01472 PUA domain 281 351 8.7E-21 T 13-09-2016 IPR002478 PUA domain GO:0003723 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 SMART SM00359 281 360 4.8E-13 T 13-09-2016 IPR002478 PUA domain GO:0003723 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 370 1.3E-128 T 13-09-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 SUPERFAMILY SSF88697 280 371 8.7E-22 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS03190 6035f09d4cb53e6b198a61571f4c21d4 372 Gene3D G3DSA:2.30.130.10 278 369 3.7E-24 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS02220 a57c0b87ef225a73c9f10ff6f91c3698 496 Gene3D G3DSA:3.40.309.10 267 455 1.7E-50 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS02220 a57c0b87ef225a73c9f10ff6f91c3698 496 SUPERFAMILY SSF53720 18 483 3.01E-133 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS02220 a57c0b87ef225a73c9f10ff6f91c3698 496 PANTHER PTHR11699:SF144 21 496 3.5E-272 T 13-09-2016 PMA3_RS02220 a57c0b87ef225a73c9f10ff6f91c3698 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS02220 a57c0b87ef225a73c9f10ff6f91c3698 496 Pfam PF00171 Aldehyde dehydrogenase family 19 478 4.4E-128 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS02220 a57c0b87ef225a73c9f10ff6f91c3698 496 PANTHER PTHR11699 21 496 3.5E-272 T 13-09-2016 PMA3_RS02220 a57c0b87ef225a73c9f10ff6f91c3698 496 Gene3D G3DSA:3.40.605.10 19 266 6.0E-74 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS17485 abdf5f66388965fa16060a42d2214da6 225 Gene3D G3DSA:3.40.50.880 1 225 4.3E-95 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS17485 abdf5f66388965fa16060a42d2214da6 225 PANTHER PTHR11019 1 63 1.7E-77 T 13-09-2016 PMA3_RS17485 abdf5f66388965fa16060a42d2214da6 225 PANTHER PTHR11019:SF97 1 63 1.7E-77 T 13-09-2016 PMA3_RS17485 abdf5f66388965fa16060a42d2214da6 225 PANTHER PTHR11019:SF97 83 223 1.7E-77 T 13-09-2016 PMA3_RS17485 abdf5f66388965fa16060a42d2214da6 225 Pfam PF01965 DJ-1/PfpI family 25 221 6.7E-17 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS17485 abdf5f66388965fa16060a42d2214da6 225 SUPERFAMILY SSF52317 1 224 1.05E-78 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS17485 abdf5f66388965fa16060a42d2214da6 225 PANTHER PTHR11019 83 223 1.7E-77 T 13-09-2016 PMA3_RS09040 1cf576303202f1a75c3b7168048da625 336 Gene3D G3DSA:3.40.50.720 1 143 2.9E-42 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09040 1cf576303202f1a75c3b7168048da625 336 PANTHER PTHR10174 93 335 1.8E-35 T 13-09-2016 PMA3_RS09040 1cf576303202f1a75c3b7168048da625 336 Gene3D G3DSA:3.30.360.10 144 314 7.3E-51 T 13-09-2016 PMA3_RS09040 1cf576303202f1a75c3b7168048da625 336 SUPERFAMILY SSF55347 131 319 5.92E-50 T 13-09-2016 PMA3_RS09040 1cf576303202f1a75c3b7168048da625 336 SMART SM00859 6 120 1.3E-26 T 13-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PMA3_RS09040 1cf576303202f1a75c3b7168048da625 336 PIRSF PIRSF000148 4 336 4.2E-88 T 13-09-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS09040 1cf576303202f1a75c3b7168048da625 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 318 2.9E-38 T 13-09-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS09040 1cf576303202f1a75c3b7168048da625 336 SUPERFAMILY SSF51735 5 155 2.97E-41 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09040 1cf576303202f1a75c3b7168048da625 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 118 1.7E-24 T 13-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PMA3_RS09040 1cf576303202f1a75c3b7168048da625 336 PANTHER PTHR10174:SF2 93 335 1.8E-35 T 13-09-2016 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 SUPERFAMILY SSF56059 3 384 1.77E-108 T 13-09-2016 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 PANTHER PTHR22931 2 266 0.0 T 13-09-2016 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 PANTHER PTHR22931 282 786 0.0 T 13-09-2016 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 SUPERFAMILY SSF51621 461 786 1.02E-98 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 PANTHER PTHR22931:SF7 2 266 0.0 T 13-09-2016 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 PANTHER PTHR22931:SF7 282 786 0.0 T 13-09-2016 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 Gene3D G3DSA:3.30.1490.20 3 192 8.4E-67 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 13-09-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 PIRSF PIRSF000854 1 791 0.0 T 13-09-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 Gene3D G3DSA:3.20.20.60 481 786 1.1E-104 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 9.6E-119 T 13-09-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 SUPERFAMILY SSF52009 347 464 2.49E-34 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 786 0.0 T 13-09-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 8.4E-62 T 13-09-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 5.6E-26 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 Gene3D G3DSA:3.50.30.10 372 469 1.4E-35 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 13-09-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 Gene3D G3DSA:3.30.470.20 196 355 2.9E-60 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 9.0E-6 T 13-09-2016 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 9.0E-6 T 13-09-2016 PMA3_RS20470 49f5dad8d1b40b1e3ad42f4951010550 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 9.0E-6 T 13-09-2016 PMA3_RS17750 83bfd0d2ce9b760f4bfa6b21ab44bafb 604 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS17750 83bfd0d2ce9b760f4bfa6b21ab44bafb 604 SMART SM00382 383 575 1.5E-19 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS17750 83bfd0d2ce9b760f4bfa6b21ab44bafb 604 SUPERFAMILY SSF52540 353 599 3.0E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17750 83bfd0d2ce9b760f4bfa6b21ab44bafb 604 Gene3D G3DSA:3.40.50.300 357 593 2.3E-67 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17750 83bfd0d2ce9b760f4bfa6b21ab44bafb 604 PANTHER PTHR24221 16 604 2.8E-165 T 13-09-2016 PMA3_RS17750 83bfd0d2ce9b760f4bfa6b21ab44bafb 604 Gene3D G3DSA:1.20.1560.10 24 339 2.5E-14 T 13-09-2016 PMA3_RS17750 83bfd0d2ce9b760f4bfa6b21ab44bafb 604 PANTHER PTHR24221:SF157 16 604 2.8E-165 T 13-09-2016 PMA3_RS17750 83bfd0d2ce9b760f4bfa6b21ab44bafb 604 Pfam PF00005 ABC transporter 374 529 4.2E-30 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS17750 83bfd0d2ce9b760f4bfa6b21ab44bafb 604 SUPERFAMILY SSF90123 16 322 3.4E-24 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS00890 04e31fa84a6012463ccf2de29282b74b 220 SUPERFAMILY SSF56784 5 216 5.38E-43 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS00890 04e31fa84a6012463ccf2de29282b74b 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 186 3.8E-11 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS00890 04e31fa84a6012463ccf2de29282b74b 220 Gene3D G3DSA:3.40.50.1000 8 193 9.9E-27 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS00890 04e31fa84a6012463ccf2de29282b74b 220 PANTHER PTHR18901:SF7 4 220 1.5E-89 T 13-09-2016 PMA3_RS00890 04e31fa84a6012463ccf2de29282b74b 220 PANTHER PTHR18901 4 220 1.5E-89 T 13-09-2016 PMA3_RS00890 04e31fa84a6012463ccf2de29282b74b 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 187 2.2E-11 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS12250 2dbbb7fe7cc571dde10b0fc92c533da5 248 Gene3D G3DSA:3.40.1010.10 2 109 8.4E-32 T 13-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PMA3_RS12250 2dbbb7fe7cc571dde10b0fc92c533da5 248 SUPERFAMILY SSF53790 2 243 3.66E-67 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS12250 2dbbb7fe7cc571dde10b0fc92c533da5 248 PANTHER PTHR21091 1 210 1.6E-63 T 13-09-2016 PMA3_RS12250 2dbbb7fe7cc571dde10b0fc92c533da5 248 Gene3D G3DSA:3.30.950.10 110 229 2.6E-40 T 13-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PMA3_RS12250 2dbbb7fe7cc571dde10b0fc92c533da5 248 PANTHER PTHR21091:SF17 1 210 1.6E-63 T 13-09-2016 PMA3_RS12250 2dbbb7fe7cc571dde10b0fc92c533da5 248 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 206 2.0E-46 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS12250 2dbbb7fe7cc571dde10b0fc92c533da5 248 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 247 5.8E-95 T 13-09-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 PMA3_RS12250 2dbbb7fe7cc571dde10b0fc92c533da5 248 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 13-09-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 SMART SM01086 318 413 1.9E-34 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 311 4.0E-50 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 PANTHER PTHR11262 1 415 1.3E-251 T 13-09-2016 PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 416 53.831 T 13-09-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 396 1.1E-15 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 SMART SM00382 113 334 2.2E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 SUPERFAMILY SSF57716 14 49 1.15E-11 T 13-09-2016 PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 SUPERFAMILY SSF52540 65 405 2.62E-71 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 Gene3D G3DSA:3.40.50.300 295 311 5.3E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 Gene3D G3DSA:3.40.50.300 67 255 5.3E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.0E-20 T 13-09-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 SMART SM00994 13 52 2.5E-24 T 13-09-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 Gene3D G3DSA:1.10.8.60 317 417 1.5E-38 T 13-09-2016 PMA3_RS08150 0346f63a718fcda74cc687a6552bf65c 427 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 411 1.9E-208 T 13-09-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 1.2E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 PANTHER PTHR30126 1 289 2.1E-50 T 13-09-2016 PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 Gene3D G3DSA:3.40.190.10 192 254 2.1E-14 T 13-09-2016 PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 7.7E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 7.7E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 7.7E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 Gene3D G3DSA:1.10.10.10 2 77 9.6E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 Pfam PF03466 LysR substrate binding domain 90 286 1.9E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 SUPERFAMILY SSF53850 90 288 3.72E-36 T 13-09-2016 PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 SUPERFAMILY SSF46785 3 79 2.29E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 PANTHER PTHR30126:SF11 1 289 2.1E-50 T 13-09-2016 PMA3_RS10195 3b93c1b4ca0c982ab64791b289b40fb4 292 Gene3D G3DSA:3.40.190.10 90 191 6.2E-20 T 13-09-2016 PMA3_RS06160 fd37ab78978c4932be6a3adbe1477f1b 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 135 2.1E-25 T 13-09-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PMA3_RS06160 fd37ab78978c4932be6a3adbe1477f1b 143 PANTHER PTHR30558 1 139 4.6E-47 T 13-09-2016 PMA3_RS06160 fd37ab78978c4932be6a3adbe1477f1b 143 PANTHER PTHR30558:SF5 1 139 4.6E-47 T 13-09-2016 PMA3_RS13105 57fc44d463d68f88fb2ddd686ae3db58 780 Pfam PF01804 Penicillin amidase 34 757 1.3E-140 T 13-09-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 PMA3_RS13105 57fc44d463d68f88fb2ddd686ae3db58 780 PANTHER PTHR34218:SF3 1 770 2.5E-249 T 13-09-2016 PMA3_RS13105 57fc44d463d68f88fb2ddd686ae3db58 780 Gene3D G3DSA:1.10.439.10 31 162 8.5E-39 T 13-09-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 PMA3_RS13105 57fc44d463d68f88fb2ddd686ae3db58 780 Gene3D G3DSA:3.60.20.10 378 588 1.1E-87 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS13105 57fc44d463d68f88fb2ddd686ae3db58 780 Gene3D G3DSA:3.60.20.10 163 296 1.1E-87 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS13105 57fc44d463d68f88fb2ddd686ae3db58 780 PANTHER PTHR34218 1 770 2.5E-249 T 13-09-2016 PMA3_RS13105 57fc44d463d68f88fb2ddd686ae3db58 780 Gene3D G3DSA:2.30.120.10 297 358 5.2E-23 T 13-09-2016 PMA3_RS13105 57fc44d463d68f88fb2ddd686ae3db58 780 SUPERFAMILY SSF56235 31 766 1.9E-179 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS07040 bfdb56e07660a85694bcdf83efbf2690 281 PANTHER PTHR30193:SF20 2 281 8.9E-75 T 13-09-2016 PMA3_RS07040 bfdb56e07660a85694bcdf83efbf2690 281 SUPERFAMILY SSF161098 6 278 1.5E-46 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS07040 bfdb56e07660a85694bcdf83efbf2690 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 275 5.3E-15 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS07040 bfdb56e07660a85694bcdf83efbf2690 281 PANTHER PTHR30193 2 281 8.9E-75 T 13-09-2016 PMA3_RS07040 bfdb56e07660a85694bcdf83efbf2690 281 Gene3D G3DSA:1.10.3720.10 5 270 4.0E-42 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 377 2.8E-110 T 13-09-2016 IPR017439 Amidohydrolase GO:0016787 PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 SUPERFAMILY SSF53187 303 391 3.01E-91 T 13-09-2016 PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 SUPERFAMILY SSF53187 7 200 3.01E-91 T 13-09-2016 PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 Pfam PF01546 Peptidase family M20/M25/M40 76 388 2.8E-36 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 Pfam PF07687 Peptidase dimerisation domain 188 283 3.3E-12 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 SUPERFAMILY SSF55031 187 295 1.57E-28 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 PIRSF PIRSF005962 4 392 2.1E-127 T 13-09-2016 IPR017439 Amidohydrolase GO:0016787 PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 Gene3D G3DSA:3.30.70.360 184 302 6.5E-37 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 PANTHER PTHR11014 10 391 9.4E-148 T 13-09-2016 PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 Gene3D G3DSA:3.40.630.10 9 181 4.8E-103 T 13-09-2016 PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 Gene3D G3DSA:3.40.630.10 303 391 4.8E-103 T 13-09-2016 PMA3_RS09695 21161650333443da9a5aac5415ecb8ac 392 PANTHER PTHR11014:SF63 10 391 9.4E-148 T 13-09-2016 PMA3_RS28165 d7f727266b138c253d45e2ab642f780a 150 Gene3D G3DSA:3.40.630.30 2 149 1.9E-51 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS28165 d7f727266b138c253d45e2ab642f780a 150 PANTHER PTHR23091 12 150 3.9E-40 T 13-09-2016 PMA3_RS28165 d7f727266b138c253d45e2ab642f780a 150 Pfam PF13673 Acetyltransferase (GNAT) domain 36 149 2.8E-18 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS28165 d7f727266b138c253d45e2ab642f780a 150 PANTHER PTHR23091:SF275 12 150 3.9E-40 T 13-09-2016 PMA3_RS28165 d7f727266b138c253d45e2ab642f780a 150 SUPERFAMILY SSF55729 3 150 1.35E-34 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS10155 3d1e387b81ff8b4807cf3fc69d6e0bc6 477 Gene3D G3DSA:3.40.309.10 261 440 2.2E-60 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS10155 3d1e387b81ff8b4807cf3fc69d6e0bc6 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS10155 3d1e387b81ff8b4807cf3fc69d6e0bc6 477 Pfam PF00171 Aldehyde dehydrogenase family 18 473 1.0E-159 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS10155 3d1e387b81ff8b4807cf3fc69d6e0bc6 477 PANTHER PTHR11699 1 476 4.1E-198 T 13-09-2016 PMA3_RS10155 3d1e387b81ff8b4807cf3fc69d6e0bc6 477 SUPERFAMILY SSF53720 3 476 2.09E-159 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS10155 3d1e387b81ff8b4807cf3fc69d6e0bc6 477 Gene3D G3DSA:3.40.605.10 7 260 1.5E-97 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 SUPERFAMILY SSF46689 239 289 8.96E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 PANTHER PTHR11019:SF105 44 291 6.9E-50 T 13-09-2016 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 3.0E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 3.0E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 Gene3D G3DSA:1.10.10.60 184 241 3.7E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 Gene3D G3DSA:1.10.10.60 242 288 3.4E-19 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 SMART SM00342 203 286 2.3E-33 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 PANTHER PTHR11019 44 291 6.9E-50 T 13-09-2016 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 Pfam PF12833 Helix-turn-helix domain 209 287 1.8E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 Pfam PF02311 AraC-like ligand binding domain 55 163 1.6E-4 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS24740 d3a5d6d54bd07bd578f175e1e49f6c28 291 SUPERFAMILY SSF46689 190 236 4.48E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20855 378f0d307fb49ff45460254ddc6bbb9d 339 Pfam PF00953 Glycosyl transferase family 4 76 227 1.8E-33 T 13-09-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS20855 378f0d307fb49ff45460254ddc6bbb9d 339 PANTHER PTHR22926:SF3 9 328 7.6E-63 T 13-09-2016 PMA3_RS20855 378f0d307fb49ff45460254ddc6bbb9d 339 PANTHER PTHR22926 9 328 7.6E-63 T 13-09-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS19360 9df950c7ce6ac191583abe1320f1a22f 303 PANTHER PTHR12128:SF34 1 289 1.1E-86 T 13-09-2016 PMA3_RS19360 9df950c7ce6ac191583abe1320f1a22f 303 PANTHER PTHR12128 1 289 1.1E-86 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS19360 9df950c7ce6ac191583abe1320f1a22f 303 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.5E-56 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS19360 9df950c7ce6ac191583abe1320f1a22f 303 Gene3D G3DSA:3.20.20.70 2 290 1.7E-86 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS19360 9df950c7ce6ac191583abe1320f1a22f 303 SUPERFAMILY SSF51569 2 289 3.14E-80 T 13-09-2016 PMA3_RS19360 9df950c7ce6ac191583abe1320f1a22f 303 PIRSF PIRSF001365 1 301 5.0E-82 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS19360 9df950c7ce6ac191583abe1320f1a22f 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 7.9E-13 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS19360 9df950c7ce6ac191583abe1320f1a22f 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 7.9E-13 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS19360 9df950c7ce6ac191583abe1320f1a22f 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 7.9E-13 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS19360 9df950c7ce6ac191583abe1320f1a22f 303 SMART SM01130 2 290 4.1E-88 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 Gene3D G3DSA:2.40.50.140 130 188 4.6E-19 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 SMART SM00841 131 187 8.4E-20 T 13-09-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 SMART SM01185 67 123 1.2E-12 T 13-09-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 122 8.8E-12 T 13-09-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 Pfam PF09285 Elongation factor P, C-terminal 131 187 6.9E-17 T 13-09-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 1.8E-20 T 13-09-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 SUPERFAMILY SSF50104 1 62 1.6E-16 T 13-09-2016 IPR008991 Translation protein SH3-like domain PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 Gene3D G3DSA:2.30.30.30 1 62 1.1E-20 T 13-09-2016 IPR014722 Ribosomal protein L2 domain 2 PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 PANTHER PTHR30053 1 189 9.3E-61 T 13-09-2016 PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 SUPERFAMILY SSF50249 65 131 1.41E-10 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 SUPERFAMILY SSF50249 131 187 7.2E-12 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 Gene3D G3DSA:2.40.50.140 65 129 2.7E-13 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 Hamap MF_00141 Elongation factor P [efp]. 1 188 43.551 T 13-09-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 PMA3_RS07690 ce00395fd64da0dc65b18b79fea3cb38 189 PIRSF PIRSF005901 1 189 7.2E-61 T 13-09-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 PMA3_RS08070 c288f062eac7b71cc30184b1f15a8f59 169 Pfam PF09351 Domain of unknown function (DUF1993) 5 166 2.4E-62 T 13-09-2016 IPR018531 Domain of unknown function DUF1993 PMA3_RS08070 c288f062eac7b71cc30184b1f15a8f59 169 PANTHER PTHR36922 1 168 5.4E-77 T 13-09-2016 PMA3_RS08070 c288f062eac7b71cc30184b1f15a8f59 169 Gene3D G3DSA:1.20.120.450 1 167 1.2E-72 T 13-09-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase PMA3_RS08070 c288f062eac7b71cc30184b1f15a8f59 169 PANTHER PTHR36922:SF1 1 168 5.4E-77 T 13-09-2016 PMA3_RS08070 c288f062eac7b71cc30184b1f15a8f59 169 SUPERFAMILY SSF109854 4 169 4.3E-63 T 13-09-2016 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 Pfam PF01636 Phosphotransferase enzyme family 742 977 1.3E-9 T 13-09-2016 IPR002575 Aminoglycoside phosphotransferase PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 16 563 1.7E-281 T 13-09-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 PANTHER PTHR10357:SF164 12 415 1.0E-284 T 13-09-2016 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 580 1100 5.9E-190 T 13-09-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 Pfam PF16657 Maltogenic Amylase, C-terminal domain 478 560 7.0E-28 T 13-09-2016 IPR032091 Maltogenic Amylase, C-terminal PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 SUPERFAMILY SSF51011 480 563 9.89E-17 T 13-09-2016 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 PANTHER PTHR10357:SF164 454 590 1.0E-284 T 13-09-2016 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 Pfam PF00128 Alpha amylase, catalytic domain 39 399 2.0E-73 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 SUPERFAMILY SSF56112 863 1048 2.04E-13 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 SUPERFAMILY SSF56112 729 822 2.04E-13 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 SMART SM00642 24 425 5.5E-100 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 Gene3D G3DSA:3.90.400.10 116 184 8.5E-25 T 13-09-2016 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 PANTHER PTHR10357 454 590 1.0E-284 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 PANTHER PTHR10357 12 415 1.0E-284 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 Gene3D G3DSA:3.20.20.80 192 424 3.5E-106 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 Gene3D G3DSA:3.20.20.80 18 115 3.5E-106 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 Gene3D G3DSA:3.20.20.80 457 471 3.5E-106 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 SUPERFAMILY SSF51445 14 341 2.68E-129 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 SUPERFAMILY SSF51445 368 475 2.68E-129 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 Gene3D G3DSA:2.60.40.1180 478 561 9.7E-15 T 13-09-2016 IPR013780 Glycosyl hydrolase, all-beta PMA3_RS14970 3bd3bdf46f7a3814c155a01b80cab0d3 1113 Gene3D G3DSA:3.90.1200.10 860 977 1.4E-5 T 13-09-2016 PMA3_RS01390 958c05e5bdb2c2fd9b4a88faa126f171 256 SUPERFAMILY SSF53335 20 252 1.35E-52 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS01390 958c05e5bdb2c2fd9b4a88faa126f171 256 PANTHER PTHR10108 8 255 1.2E-169 T 13-09-2016 PMA3_RS01390 958c05e5bdb2c2fd9b4a88faa126f171 256 Gene3D G3DSA:3.40.50.150 28 252 1.8E-58 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS01390 958c05e5bdb2c2fd9b4a88faa126f171 256 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 163 177 - T 13-09-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PMA3_RS01390 958c05e5bdb2c2fd9b4a88faa126f171 256 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 41 56 - T 13-09-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PMA3_RS01390 958c05e5bdb2c2fd9b4a88faa126f171 256 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 21 255 38.807 T 13-09-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PMA3_RS01390 958c05e5bdb2c2fd9b4a88faa126f171 256 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 30 255 3.0E-84 T 13-09-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PMA3_RS01390 958c05e5bdb2c2fd9b4a88faa126f171 256 PANTHER PTHR10108:SF864 8 255 1.2E-169 T 13-09-2016 PMA3_RS01390 958c05e5bdb2c2fd9b4a88faa126f171 256 Pfam PF01209 ubiE/COQ5 methyltransferase family 25 255 6.7E-99 T 13-09-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PMA3_RS23855 0dff5b9b7ff49cfffe4920057f083f4b 244 SUPERFAMILY SSF52540 1 226 1.09E-76 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23855 0dff5b9b7ff49cfffe4920057f083f4b 244 Pfam PF00005 ABC transporter 17 165 1.4E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS23855 0dff5b9b7ff49cfffe4920057f083f4b 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS23855 0dff5b9b7ff49cfffe4920057f083f4b 244 PIRSF PIRSF039085 1 243 1.3E-103 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS23855 0dff5b9b7ff49cfffe4920057f083f4b 244 PANTHER PTHR24220 3 244 1.1E-181 T 13-09-2016 PMA3_RS23855 0dff5b9b7ff49cfffe4920057f083f4b 244 PANTHER PTHR24220:SF317 3 244 1.1E-181 T 13-09-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 PMA3_RS23855 0dff5b9b7ff49cfffe4920057f083f4b 244 SMART SM00382 26 213 4.4E-18 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS23855 0dff5b9b7ff49cfffe4920057f083f4b 244 Gene3D G3DSA:3.40.50.300 1 227 2.0E-80 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16385 ac761a6fbcef4e9ac60162b67023f332 307 Gene3D G3DSA:3.40.50.300 3 222 5.5E-58 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16385 ac761a6fbcef4e9ac60162b67023f332 307 PANTHER PTHR24220 5 237 6.3E-102 T 13-09-2016 PMA3_RS16385 ac761a6fbcef4e9ac60162b67023f332 307 PANTHER PTHR24220 267 295 6.3E-102 T 13-09-2016 PMA3_RS16385 ac761a6fbcef4e9ac60162b67023f332 307 SMART SM00382 28 212 1.7E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS16385 ac761a6fbcef4e9ac60162b67023f332 307 Pfam PF00005 ABC transporter 19 156 6.1E-28 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS16385 ac761a6fbcef4e9ac60162b67023f332 307 SUPERFAMILY SSF52540 3 219 6.39E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16385 ac761a6fbcef4e9ac60162b67023f332 307 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS16385 ac761a6fbcef4e9ac60162b67023f332 307 PANTHER PTHR24220:SF595 5 237 6.3E-102 T 13-09-2016 PMA3_RS16385 ac761a6fbcef4e9ac60162b67023f332 307 PANTHER PTHR24220:SF595 267 295 6.3E-102 T 13-09-2016 PMA3_RS18960 ec9af0c4d443c7135019852e2cb1ad14 117 Gene3D G3DSA:1.10.443.10 8 112 7.6E-19 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS18960 ec9af0c4d443c7135019852e2cb1ad14 117 SUPERFAMILY SSF56349 7 116 5.3E-24 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS18960 ec9af0c4d443c7135019852e2cb1ad14 117 Pfam PF00589 Phage integrase family 11 103 1.3E-13 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 SUPERFAMILY SSF46785 4 85 6.58E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 Pfam PF03466 LysR substrate binding domain 88 291 7.5E-52 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 Gene3D G3DSA:3.40.190.10 176 258 6.9E-25 T 13-09-2016 PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.9E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 PANTHER PTHR30537 1 297 1.1E-117 T 13-09-2016 PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 SUPERFAMILY SSF53850 88 293 2.71E-52 T 13-09-2016 PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.4E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.4E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.4E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 Gene3D G3DSA:1.10.10.10 4 84 5.3E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 PANTHER PTHR30537:SF5 1 297 1.1E-117 T 13-09-2016 PMA3_RS17690 7a4408da4063ffcac25019328eb8a134 298 Gene3D G3DSA:3.40.190.10 92 175 5.8E-23 T 13-09-2016 PMA3_RS12395 210a0fcddfad7b68610d1194e1609503 354 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 347 5.9E-35 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12395 210a0fcddfad7b68610d1194e1609503 354 PANTHER PTHR30465:SF66 1 349 1.8E-195 T 13-09-2016 PMA3_RS12395 210a0fcddfad7b68610d1194e1609503 354 SUPERFAMILY SSF161098 116 331 1.62E-15 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12395 210a0fcddfad7b68610d1194e1609503 354 Gene3D G3DSA:1.10.3720.10 115 339 2.2E-14 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12395 210a0fcddfad7b68610d1194e1609503 354 PANTHER PTHR30465 1 349 1.8E-195 T 13-09-2016 PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 PANTHER PTHR19211:SF6 6 517 1.0E-150 T 13-09-2016 PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 SUPERFAMILY SSF52540 356 515 3.96E-31 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 SMART SM00382 30 216 1.2E-7 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 SMART SM00382 362 525 1.3E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 Pfam PF00005 ABC transporter 26 171 1.4E-17 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 Pfam PF00005 ABC transporter 355 483 1.3E-15 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 SUPERFAMILY SSF52540 4 240 8.91E-37 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 Gene3D G3DSA:3.40.50.300 354 516 1.5E-27 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 Gene3D G3DSA:3.40.50.300 4 256 1.8E-36 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15200 dbd6de9b79d4cc99776976339402f243 527 PANTHER PTHR19211 6 517 1.0E-150 T 13-09-2016 PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 PANTHER PTHR22576 44 202 2.7E-13 T 13-09-2016 PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 Pfam PF00656 Caspase domain 4 225 8.3E-13 T 13-09-2016 PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 SUPERFAMILY SSF158702 784 986 1.54E-18 T 13-09-2016 PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 Gene3D G3DSA:3.40.50.1460 3 131 7.8E-9 T 13-09-2016 IPR029030 Caspase-like domain PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 Pfam PF00270 DEAD/DEAH box helicase 296 447 1.8E-16 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 Gene3D G3DSA:3.40.50.300 264 458 4.2E-28 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 SMART SM00487 279 486 5.9E-15 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 SUPERFAMILY SSF52129 8 228 3.31E-16 T 13-09-2016 IPR029030 Caspase-like domain PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 SUPERFAMILY SSF52540 578 672 3.83E-38 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 SUPERFAMILY SSF52540 494 548 3.83E-38 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 SUPERFAMILY SSF52540 296 451 3.83E-38 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 SMART SM00490 568 659 1.6E-14 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 Pfam PF00271 Helicase conserved C-terminal domain 577 659 1.6E-9 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS25730 594a2c916efdbae3ebf41c0229bf8b63 997 Gene3D G3DSA:3.40.50.300 508 664 8.2E-19 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19735 7837422d5602ab3e7bc5b4445930ed06 104 SUPERFAMILY SSF47413 43 89 9.12E-8 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS19735 7837422d5602ab3e7bc5b4445930ed06 104 Gene3D G3DSA:1.10.260.40 43 94 2.5E-14 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS19735 7837422d5602ab3e7bc5b4445930ed06 104 PANTHER PTHR36511:SF3 1 101 2.6E-21 T 13-09-2016 PMA3_RS19735 7837422d5602ab3e7bc5b4445930ed06 104 PANTHER PTHR36511 1 101 2.6E-21 T 13-09-2016 PMA3_RS23285 07b86ac4593ecc1daddfe457e63118bd 73 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 7.5E-22 T 13-09-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PMA3_RS23285 07b86ac4593ecc1daddfe457e63118bd 73 SMART SM00834 1 42 1.1E-19 T 13-09-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PMA3_RS23285 07b86ac4593ecc1daddfe457e63118bd 73 PANTHER PTHR34404 2 64 1.0E-18 T 13-09-2016 PMA3_RS23285 07b86ac4593ecc1daddfe457e63118bd 73 PANTHER PTHR34404:SF2 2 64 1.0E-18 T 13-09-2016 PMA3_RS23285 07b86ac4593ecc1daddfe457e63118bd 73 Pfam PF09723 Zinc ribbon domain 1 40 1.3E-15 T 13-09-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PMA3_RS09680 907c691ef82cc3b48a73f5313b7a0a8b 253 PANTHER PTHR24220 5 253 9.3E-146 T 13-09-2016 PMA3_RS09680 907c691ef82cc3b48a73f5313b7a0a8b 253 Gene3D G3DSA:3.40.50.300 4 248 3.0E-78 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09680 907c691ef82cc3b48a73f5313b7a0a8b 253 SUPERFAMILY SSF52540 4 247 4.85E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09680 907c691ef82cc3b48a73f5313b7a0a8b 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS09680 907c691ef82cc3b48a73f5313b7a0a8b 253 PANTHER PTHR24220:SF347 5 253 9.3E-146 T 13-09-2016 PMA3_RS09680 907c691ef82cc3b48a73f5313b7a0a8b 253 SMART SM00382 28 226 4.8E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS09680 907c691ef82cc3b48a73f5313b7a0a8b 253 Pfam PF00005 ABC transporter 19 178 1.3E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS09680 907c691ef82cc3b48a73f5313b7a0a8b 253 PIRSF PIRSF039085 1 253 2.6E-111 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS04940 5e03d8a62b9efeeac860f4050a96caca 298 PANTHER PTHR30537 1 292 2.2E-161 T 13-09-2016 PMA3_RS04940 5e03d8a62b9efeeac860f4050a96caca 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 65 8.5E-20 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS04940 5e03d8a62b9efeeac860f4050a96caca 298 Gene3D G3DSA:1.10.10.10 9 87 1.1E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS04940 5e03d8a62b9efeeac860f4050a96caca 298 Gene3D G3DSA:3.40.190.10 179 256 1.4E-22 T 13-09-2016 PMA3_RS04940 5e03d8a62b9efeeac860f4050a96caca 298 Pfam PF03466 LysR substrate binding domain 90 288 1.2E-47 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS04940 5e03d8a62b9efeeac860f4050a96caca 298 Gene3D G3DSA:3.40.190.10 95 178 2.9E-23 T 13-09-2016 PMA3_RS04940 5e03d8a62b9efeeac860f4050a96caca 298 SUPERFAMILY SSF46785 8 90 1.93E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS04940 5e03d8a62b9efeeac860f4050a96caca 298 SUPERFAMILY SSF53850 89 293 7.96E-50 T 13-09-2016 PMA3_RS04940 5e03d8a62b9efeeac860f4050a96caca 298 PANTHER PTHR30537:SF10 1 292 2.2E-161 T 13-09-2016 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 PANTHER PTHR11606:SF4 3 445 1.1E-244 T 13-09-2016 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 Gene3D G3DSA:3.40.50.720 207 370 4.9E-60 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 200 443 1.8E-84 T 13-09-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 9.6E-50 T 13-09-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 SMART SM00839 202 443 2.9E-87 T 13-09-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 Gene3D G3DSA:1.10.285.10 4 65 1.3E-26 T 13-09-2016 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 Gene3D G3DSA:1.10.285.10 371 445 2.1E-27 T 13-09-2016 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 PANTHER PTHR11606 3 445 1.1E-244 T 13-09-2016 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 PIRSF PIRSF000185 20 445 1.0E-118 T 13-09-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 SUPERFAMILY SSF53223 5 194 8.96E-75 T 13-09-2016 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 120 133 - T 13-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 1.0E-32 T 13-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 233 253 1.0E-32 T 13-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 370 381 1.0E-32 T 13-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 191 213 1.0E-32 T 13-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 SUPERFAMILY SSF51735 200 444 4.16E-76 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03105 bf867eb4ccf5e1738b58d4c302d1cc30 445 Gene3D G3DSA:3.40.192.10 66 187 2.1E-61 T 13-09-2016 PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 PANTHER PTHR30154 1 142 6.6E-31 T 13-09-2016 PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 Pfam PF01037 Lrp/AsnC ligand binding domain 83 142 3.5E-12 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 Gene3D G3DSA:3.30.70.920 80 142 1.3E-13 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 SUPERFAMILY SSF46785 4 57 2.7E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 Gene3D G3DSA:1.10.10.10 2 56 5.4E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 13-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 SUPERFAMILY SSF54909 68 144 2.41E-13 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 4.6E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 4.6E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 4.6E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 1.5E-14 T 13-09-2016 PMA3_RS09635 ccc007061cfed601df87b738b294a932 145 SMART SM00344 5 113 6.5E-19 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS26120 7cf90790116aee207c4616353418e77d 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 1.9E-6 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS26120 7cf90790116aee207c4616353418e77d 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 1.9E-6 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS26120 7cf90790116aee207c4616353418e77d 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.9E-6 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS26120 7cf90790116aee207c4616353418e77d 272 Gene3D G3DSA:3.40.50.1820 15 266 2.9E-39 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS26120 7cf90790116aee207c4616353418e77d 272 PANTHER PTHR10992 14 268 1.2E-28 T 13-09-2016 PMA3_RS26120 7cf90790116aee207c4616353418e77d 272 SUPERFAMILY SSF53474 10 266 5.54E-41 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS26120 7cf90790116aee207c4616353418e77d 272 Pfam PF12697 Alpha/beta hydrolase family 35 257 4.0E-18 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS04400 290d3536af9519723608962edbadba61 1298 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1298 21.286 T 13-09-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS04400 290d3536af9519723608962edbadba61 1298 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1297 0.0 T 13-09-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS04400 290d3536af9519723608962edbadba61 1298 SUPERFAMILY SSF109736 153 218 1.57E-21 T 13-09-2016 PMA3_RS04400 290d3536af9519723608962edbadba61 1298 SUPERFAMILY SSF56042 825 1036 5.53E-53 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS04400 290d3536af9519723608962edbadba61 1298 SUPERFAMILY SSF82697 1 150 2.62E-47 T 13-09-2016 PMA3_RS04400 290d3536af9519723608962edbadba61 1298 PANTHER PTHR10099:SF5 1 1298 0.0 T 13-09-2016 PMA3_RS04400 290d3536af9519723608962edbadba61 1298 SUPERFAMILY SSF55326 622 814 1.31E-66 T 13-09-2016 PMA3_RS04400 290d3536af9519723608962edbadba61 1298 Gene3D G3DSA:3.40.50.880 1044 1267 1.5E-11 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS04400 290d3536af9519723608962edbadba61 1298 SUPERFAMILY SSF56042 429 612 6.88E-54 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS04400 290d3536af9519723608962edbadba61 1298 Gene3D G3DSA:3.30.1330.10 209 419 5.0E-39 T 13-09-2016 IPR016188 PurM-like, N-terminal domain PMA3_RS04400 290d3536af9519723608962edbadba61 1298 Gene3D G3DSA:3.30.1330.10 644 807 1.8E-13 T 13-09-2016 IPR016188 PurM-like, N-terminal domain PMA3_RS04400 290d3536af9519723608962edbadba61 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 839 960 1.7E-12 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS04400 290d3536af9519723608962edbadba61 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 430 587 9.9E-29 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS04400 290d3536af9519723608962edbadba61 1298 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1042 1297 2.5E-107 T 13-09-2016 PMA3_RS04400 290d3536af9519723608962edbadba61 1298 SMART SM01211 1042 1297 1.1E-152 T 13-09-2016 PMA3_RS04400 290d3536af9519723608962edbadba61 1298 SUPERFAMILY SSF52317 1039 1297 3.33E-96 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS04400 290d3536af9519723608962edbadba61 1298 SUPERFAMILY SSF55326 219 426 6.28E-64 T 13-09-2016 PMA3_RS04400 290d3536af9519723608962edbadba61 1298 PANTHER PTHR10099 1 1298 0.0 T 13-09-2016 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 Pfam PF02913 FAD linked oxidases, C-terminal domain 268 513 1.4E-59 T 13-09-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 PANTHER PTHR11748 220 562 1.4E-290 T 13-09-2016 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 PANTHER PTHR11748 4 181 1.4E-290 T 13-09-2016 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 SUPERFAMILY SSF56176 6 262 2.62E-57 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 Pfam PF12838 4Fe-4S dicluster domain 539 608 1.7E-9 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 PANTHER PTHR11748:SF65 220 562 1.4E-290 T 13-09-2016 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 PANTHER PTHR11748:SF65 4 181 1.4E-290 T 13-09-2016 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 Gene3D G3DSA:3.30.43.10 3 89 7.5E-15 T 13-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 Pfam PF01565 FAD binding domain 41 176 6.6E-34 T 13-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 SUPERFAMILY SSF55103 269 521 5.56E-58 T 13-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 Gene3D G3DSA:1.10.1060.10 506 623 2.6E-19 T 13-09-2016 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 Pfam PF02754 Cysteine-rich domain 833 894 0.067 T 13-09-2016 IPR004017 Cysteine-rich domain PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 Pfam PF02754 Cysteine-rich domain 723 775 0.15 T 13-09-2016 IPR004017 Cysteine-rich domain PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 Gene3D G3DSA:3.30.465.10 97 261 1.3E-18 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 540 551 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 SUPERFAMILY SSF46548 492 620 3.31E-21 T 13-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PMA3_RS25650 bdcffd7c4e9c1f9a24cc6d3edebe5ecf 936 Gene3D G3DSA:1.10.45.10 476 505 2.6E-8 T 13-09-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PMA3_RS28835 959e4667b7e27dd7cdb62c4d31c53fbb 250 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 74 121 1.2E-7 T 13-09-2016 IPR018637 Domain of unknown function DUF2059 PMA3_RS23490 2790f50d8272f40d98e3a2a8837a2857 209 PANTHER PTHR33798:SF4 3 209 2.1E-82 T 13-09-2016 PMA3_RS23490 2790f50d8272f40d98e3a2a8837a2857 209 Gene3D G3DSA:2.30.110.10 14 188 2.7E-65 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS23490 2790f50d8272f40d98e3a2a8837a2857 209 Pfam PF01613 Flavin reductase like domain 27 166 2.3E-16 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS23490 2790f50d8272f40d98e3a2a8837a2857 209 SMART SM00903 25 176 1.3E-7 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS23490 2790f50d8272f40d98e3a2a8837a2857 209 PANTHER PTHR33798 3 209 2.1E-82 T 13-09-2016 PMA3_RS23490 2790f50d8272f40d98e3a2a8837a2857 209 SUPERFAMILY SSF50475 4 197 1.52E-50 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 SUPERFAMILY SSF53850 52 274 2.53E-32 T 13-09-2016 PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 62 272 6.7E-22 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 Gene3D G3DSA:3.40.190.10 137 215 7.3E-7 T 13-09-2016 PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 SUPERFAMILY SSF55785 318 443 1.59E-15 T 13-09-2016 IPR000014 PAS domain PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 Gene3D G3DSA:3.40.190.10 236 273 9.0E-15 T 13-09-2016 PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 Gene3D G3DSA:3.40.190.10 62 136 9.0E-15 T 13-09-2016 PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 SMART SM00062 60 276 1.5E-17 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 Pfam PF00989 PAS fold 335 443 1.0E-10 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 Gene3D G3DSA:3.30.450.20 318 443 1.9E-13 T 13-09-2016 PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 335 448 6.1E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS04500 8d21afd841cc70d3197d74ed49b65f71 450 SMART SM00091 331 399 0.0012 T 13-09-2016 IPR000014 PAS domain PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 PANTHER PTHR24221:SF161 16 555 1.4E-50 T 13-09-2016 PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 Pfam PF00005 ABC transporter 359 495 2.6E-17 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 SMART SM00382 363 541 2.1E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 SUPERFAMILY SSF90123 9 320 2.49E-35 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 SUPERFAMILY SSF52540 360 555 2.13E-35 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 Gene3D G3DSA:3.40.50.300 325 372 6.1E-4 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 Gene3D G3DSA:1.20.1560.10 8 319 5.3E-33 T 13-09-2016 PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 PANTHER PTHR24221 16 555 1.4E-50 T 13-09-2016 PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 Pfam PF00664 ABC transporter transmembrane region 20 286 3.8E-13 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS17275 1d6450d81e65befc4cca8f8a783ba20e 568 Gene3D G3DSA:3.40.50.300 373 556 3.1E-37 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 3.3E-28 T 13-09-2016 IPR032305 GTP-binding protein, middle domain PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 Pfam PF13167 GTP-binding GTPase N-terminal 28 113 3.3E-30 T 13-09-2016 IPR025121 GTPase HflX, N-terminal PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 SUPERFAMILY SSF54980 370 422 1.8E-7 T 13-09-2016 IPR009022 Elongation factor G, III-V domain PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 PIRSF PIRSF006809 5 422 2.3E-144 T 13-09-2016 IPR016496 GTPase HflX GO:0005525 PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 SUPERFAMILY SSF52540 198 372 1.49E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 PANTHER PTHR10229 2 433 2.3E-173 T 13-09-2016 IPR016496 GTPase HflX GO:0005525 PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 Hamap MF_00900 GTPase HflX [hflX]. 28 391 45.745 T 13-09-2016 IPR016496 GTPase HflX GO:0005525 PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 1.8E-8 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 1.8E-8 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 1.8E-8 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 PANTHER PTHR10229:SF0 2 433 2.3E-173 T 13-09-2016 PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 Gene3D G3DSA:3.40.50.300 198 362 3.6E-34 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 361 2.6E-153 T 13-09-2016 IPR016496 GTPase HflX GO:0005525 PMA3_RS02065 c3deacd3dc3f51bbb36058f2d009687d 433 Pfam PF01926 50S ribosome-binding GTPase 201 319 8.8E-20 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 Gene3D G3DSA:3.40.50.300 132 418 2.9E-106 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 SMART SM00959 5 47 9.4E-19 T 13-09-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 8.3E-18 T 13-09-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.1E-32 T 13-09-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 5.7E-217 T 13-09-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 Gene3D G3DSA:1.10.720.10 1 47 3.0E-22 T 13-09-2016 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 SUPERFAMILY SSF50249 49 125 1.71E-29 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 PANTHER PTHR15184 47 141 2.2E-194 T 13-09-2016 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 PANTHER PTHR15184 160 402 2.2E-194 T 13-09-2016 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.1E-23 T 13-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 PANTHER PTHR15184:SF34 47 141 2.2E-194 T 13-09-2016 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 SMART SM00357 52 118 6.6E-19 T 13-09-2016 IPR011129 Cold shock protein GO:0003676 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 Gene3D G3DSA:2.40.50.140 49 117 1.4E-36 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 SMART SM00382 170 355 2.6E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 SUPERFAMILY SSF68912 1 46 2.0E-12 T 13-09-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 PANTHER PTHR15184:SF34 160 402 2.2E-194 T 13-09-2016 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.0 T 13-09-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PMA3_RS29105 8fe942d8d12ade80dddd54c807ea90de 419 SUPERFAMILY SSF52540 90 371 6.94E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Pfam PF00990 Diguanylate cyclase, GGDEF domain 808 965 8.3E-51 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 PANTHER PTHR10799:SF774 387 513 3.2E-88 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 PANTHER PTHR10799:SF774 1165 1184 3.2E-88 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 308 433 2.9E-11 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 687 804 1.1E-18 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 559 682 7.6E-14 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 436 557 1.4E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SUPERFAMILY SSF55785 297 424 7.41E-16 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 804 967 5.4E-42 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Pfam PF00563 EAL domain 986 1220 2.6E-73 T 13-09-2016 IPR001633 EAL domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 256 8.9E-40 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Gene3D G3DSA:3.40.190.10 218 257 7.3E-26 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Gene3D G3DSA:3.40.190.10 36 115 7.3E-26 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Gene3D G3DSA:3.30.450.20 294 428 1.9E-18 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SUPERFAMILY SSF53850 39 256 4.93E-50 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00091 683 752 2.1E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00091 312 380 0.024 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00091 438 505 1.4E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00091 562 629 0.22 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00052 979 1225 4.7E-113 T 13-09-2016 IPR001633 EAL domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00086 755 797 1.3E-6 T 13-09-2016 IPR001610 PAC motif PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00086 510 550 0.086 T 13-09-2016 IPR001610 PAC motif PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00086 635 675 0.0011 T 13-09-2016 IPR001610 PAC motif PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00086 386 426 0.034 T 13-09-2016 IPR001610 PAC motif PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Gene3D G3DSA:3.20.20.450 983 1230 1.7E-99 T 13-09-2016 IPR001633 EAL domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 PANTHER PTHR10799:SF774 841 1059 3.2E-88 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SUPERFAMILY SSF55785 547 673 4.19E-19 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SUPERFAMILY SSF55785 688 795 2.9E-26 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00062 38 258 8.3E-32 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 PANTHER PTHR10799 1165 1184 3.2E-88 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 PANTHER PTHR10799 841 1059 3.2E-88 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SMART SM00267 797 969 8.1E-68 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SUPERFAMILY SSF55073 813 970 3.84E-49 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SUPERFAMILY SSF55785 423 548 1.3E-19 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Gene3D G3DSA:3.30.450.20 548 672 1.8E-20 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Gene3D G3DSA:3.30.450.20 429 547 3.5E-22 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Pfam PF13426 PAS domain 450 549 8.1E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Pfam PF13426 PAS domain 572 674 1.9E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Pfam PF13426 PAS domain 694 795 5.7E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Gene3D G3DSA:3.30.70.270 809 976 1.4E-57 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Gene3D G3DSA:3.30.450.20 673 791 7.2E-28 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 PANTHER PTHR10799 387 513 3.2E-88 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 SUPERFAMILY SSF141868 984 1233 4.84E-91 T 13-09-2016 IPR001633 EAL domain PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Gene3D G3DSA:3.40.190.10 116 214 3.1E-12 T 13-09-2016 PMA3_RS27640 46901ab24144a23b9404594ff2425f07 1248 Pfam PF08447 PAS fold 337 410 9.7E-10 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 PIRSF PIRSF016578 12 387 3.6E-15 T 13-09-2016 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 123 1.5E-38 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 4.0E-41 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 Gene3D G3DSA:1.20.140.10 222 385 1.8E-65 T 13-09-2016 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 4.9E-27 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 Gene3D G3DSA:2.40.110.10 126 221 4.7E-40 T 13-09-2016 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 SUPERFAMILY SSF47203 234 385 1.47E-45 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 SUPERFAMILY SSF56645 5 247 2.75E-88 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 PANTHER PTHR10909:SF326 6 387 6.5E-293 T 13-09-2016 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 PANTHER PTHR10909 6 387 6.5E-293 T 13-09-2016 PMA3_RS08335 07e6fd029392fa48631520308a982e92 387 Gene3D G3DSA:1.10.540.10 4 125 7.4E-45 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS02620 025c5dedf4fc6785b004742d3abadf8d 449 Pfam PF01554 MatE 23 183 4.6E-22 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS02620 025c5dedf4fc6785b004742d3abadf8d 449 Pfam PF01554 MatE 248 405 5.5E-14 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS02620 025c5dedf4fc6785b004742d3abadf8d 449 PANTHER PTHR11206 7 444 2.0E-124 T 13-09-2016 PMA3_RS02620 025c5dedf4fc6785b004742d3abadf8d 449 PANTHER PTHR11206:SF94 7 444 2.0E-124 T 13-09-2016 PMA3_RS02620 025c5dedf4fc6785b004742d3abadf8d 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 2.0E-74 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS28590 c8836ff5f2cf6253f0b84fe37f6fd482 332 Pfam PF00561 alpha/beta hydrolase fold 61 309 1.9E-20 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS28590 c8836ff5f2cf6253f0b84fe37f6fd482 332 PANTHER PTHR10794 5 329 4.4E-75 T 13-09-2016 PMA3_RS28590 c8836ff5f2cf6253f0b84fe37f6fd482 332 SUPERFAMILY SSF53474 33 307 2.38E-47 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS28590 c8836ff5f2cf6253f0b84fe37f6fd482 332 Gene3D G3DSA:3.40.50.1820 44 309 1.5E-31 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS28590 c8836ff5f2cf6253f0b84fe37f6fd482 332 PIRSF PIRSF005211 1 332 2.0E-110 T 13-09-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- PMA3_RS28590 c8836ff5f2cf6253f0b84fe37f6fd482 332 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 234 275 - T 13-09-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- PMA3_RS15415 d364317467b6e7ad81b56ba1b8bd3ed7 339 SUPERFAMILY SSF161098 136 322 5.76E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS15415 d364317467b6e7ad81b56ba1b8bd3ed7 339 PANTHER PTHR30325 1 339 5.3E-199 T 13-09-2016 PMA3_RS15415 d364317467b6e7ad81b56ba1b8bd3ed7 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 4.1E-26 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS15415 d364317467b6e7ad81b56ba1b8bd3ed7 339 Gene3D G3DSA:1.10.3720.10 132 329 8.1E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Gene3D G3DSA:3.30.1360.40 236 334 3.8E-38 T 13-09-2016 IPR024946 Arginine repressor C-terminal-like domain PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 SUPERFAMILY SSF56719 30 522 4.71E-183 T 13-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 591 639 1.4E-10 T 13-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 687 729 1.1E-6 T 13-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 784 830 8.3E-12 T 13-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 733 778 1.4E-14 T 13-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 834 880 6.4E-13 T 13-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 541 586 1.4E-8 T 13-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Gene3D G3DSA:3.90.199.10 34 216 5.4E-84 T 13-09-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 PANTHER PTHR10169 451 642 0.0 T 13-09-2016 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 PANTHER PTHR10169 3 418 0.0 T 13-09-2016 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 PANTHER PTHR10169:SF48 683 850 0.0 T 13-09-2016 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 SMART SM00434 11 500 2.1E-296 T 13-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 639 2.9E-291 T 13-09-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Gene3D G3DSA:2.120.10.90 533 651 1.9E-128 T 13-09-2016 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Gene3D G3DSA:2.120.10.90 686 880 1.9E-128 T 13-09-2016 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 2.2E-152 T 13-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 SUPERFAMILY SSF101904 680 895 3.01E-100 T 13-09-2016 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 SUPERFAMILY SSF101904 534 639 3.01E-100 T 13-09-2016 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Gene3D G3DSA:1.10.268.10 364 496 1.3E-47 T 13-09-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 885 29.383 T 13-09-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 PANTHER PTHR10169:SF48 451 642 0.0 T 13-09-2016 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 PANTHER PTHR10169:SF48 3 418 0.0 T 13-09-2016 PMA3_RS20975 a4a3700523b5277139dca5531e73fd41 927 PANTHER PTHR10169 683 850 0.0 T 13-09-2016 PMA3_RS06750 6432709d7109743783b9002dc26f8c77 206 PANTHER PTHR30246 4 189 1.2E-49 T 13-09-2016 PMA3_RS06750 6432709d7109743783b9002dc26f8c77 206 Gene3D G3DSA:3.20.20.70 3 204 8.4E-65 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS06750 6432709d7109743783b9002dc26f8c77 206 SUPERFAMILY SSF51569 4 203 2.2E-56 T 13-09-2016 PMA3_RS06750 6432709d7109743783b9002dc26f8c77 206 PANTHER PTHR30246:SF1 4 189 1.2E-49 T 13-09-2016 PMA3_RS06750 6432709d7109743783b9002dc26f8c77 206 Pfam PF01081 KDPG and KHG aldolase 5 181 9.6E-31 T 13-09-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 Gene3D G3DSA:3.55.50.10 115 208 6.0E-28 T 13-09-2016 PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 SUPERFAMILY SSF69279 15 196 1.53E-44 T 13-09-2016 PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 617 765 6.4E-51 T 13-09-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 SUPERFAMILY SSF69255 386 476 1.26E-25 T 13-09-2016 PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 16 523 1.4E-71 T 13-09-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 Gene3D G3DSA:4.10.180.10 302 317 5.2E-5 T 13-09-2016 IPR027440 Capsid protein alpha-like domain PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 Pfam PF05954 Phage late control gene D protein (GPD) 33 358 6.8E-56 T 13-09-2016 PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 522 9.0E-122 T 13-09-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 PANTHER PTHR32305:SF7 30 831 2.9E-154 T 13-09-2016 PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 SUPERFAMILY SSF69279 206 387 2.21E-42 T 13-09-2016 PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 Gene3D G3DSA:2.40.50.230 394 475 1.0E-24 T 13-09-2016 IPR006531 Gp5 N-terminal PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 PANTHER PTHR32305 30 831 2.9E-154 T 13-09-2016 PMA3_RS08400 a19b2088346562fce58f19074d1bf3e5 904 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 496 597 1.2E-36 T 13-09-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PMA3_RS24275 fee71028b21dae792eea715afbde6d10 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 2.1E-67 T 13-09-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 PMA3_RS24275 fee71028b21dae792eea715afbde6d10 163 Pfam PF02082 Transcriptional regulator 1 83 3.7E-28 T 13-09-2016 IPR000944 Transcription regulator Rrf2-type PMA3_RS24275 fee71028b21dae792eea715afbde6d10 163 PANTHER PTHR33221 2 152 2.8E-73 T 13-09-2016 PMA3_RS24275 fee71028b21dae792eea715afbde6d10 163 PANTHER PTHR33221:SF1 2 152 2.8E-73 T 13-09-2016 PMA3_RS24275 fee71028b21dae792eea715afbde6d10 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.4E-47 T 13-09-2016 IPR000944 Transcription regulator Rrf2-type PMA3_RS24275 fee71028b21dae792eea715afbde6d10 163 Gene3D G3DSA:1.10.10.10 1 135 1.4E-32 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24275 fee71028b21dae792eea715afbde6d10 163 SUPERFAMILY SSF46785 2 132 1.78E-36 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14205 a0d979efecab6c9d2efbd4b73935561c 415 PANTHER PTHR23518:SF2 9 411 2.5E-114 T 13-09-2016 PMA3_RS14205 a0d979efecab6c9d2efbd4b73935561c 415 PANTHER PTHR23518 9 411 2.5E-114 T 13-09-2016 PMA3_RS14205 a0d979efecab6c9d2efbd4b73935561c 415 Gene3D G3DSA:1.20.1250.20 32 217 2.5E-27 T 13-09-2016 PMA3_RS14205 a0d979efecab6c9d2efbd4b73935561c 415 Gene3D G3DSA:1.20.1250.20 262 409 4.8E-21 T 13-09-2016 PMA3_RS14205 a0d979efecab6c9d2efbd4b73935561c 415 SUPERFAMILY SSF103473 27 409 4.58E-60 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS14205 a0d979efecab6c9d2efbd4b73935561c 415 Pfam PF07690 Major Facilitator Superfamily 273 409 1.6E-14 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS14205 a0d979efecab6c9d2efbd4b73935561c 415 Pfam PF07690 Major Facilitator Superfamily 36 255 4.6E-23 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS09410 7fae20ace77beef7d7f8e02922b23619 400 Pfam PF07690 Major Facilitator Superfamily 26 265 7.9E-12 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS09410 7fae20ace77beef7d7f8e02922b23619 400 Gene3D G3DSA:1.20.1250.20 13 193 8.9E-18 T 13-09-2016 PMA3_RS09410 7fae20ace77beef7d7f8e02922b23619 400 Gene3D G3DSA:1.20.1250.20 218 397 1.4E-7 T 13-09-2016 PMA3_RS09410 7fae20ace77beef7d7f8e02922b23619 400 SUPERFAMILY SSF103473 8 397 1.83E-37 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS09410 7fae20ace77beef7d7f8e02922b23619 400 PANTHER PTHR11360 9 400 2.7E-66 T 13-09-2016 PMA3_RS09410 7fae20ace77beef7d7f8e02922b23619 400 PANTHER PTHR11360:SF126 9 400 2.7E-66 T 13-09-2016 PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 PANTHER PTHR24567:SF28 12 239 2.2E-101 T 13-09-2016 PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 Gene3D G3DSA:1.10.10.10 165 239 2.7E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 ProSitePatterns PS00042 Crp-type HTH domain signature. 190 213 - T 13-09-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 188 204 8.3E-11 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 204 219 8.3E-11 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 Gene3D G3DSA:2.60.120.10 14 164 4.6E-32 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 Pfam PF00027 Cyclic nucleotide-binding domain 45 128 1.4E-15 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 SUPERFAMILY SSF46785 161 239 2.27E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 SMART SM00100 25 146 1.9E-20 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 PANTHER PTHR24567 12 239 2.2E-101 T 13-09-2016 PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 SMART SM00419 182 230 2.1E-15 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 Pfam PF13545 Crp-like helix-turn-helix domain 163 236 9.6E-17 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS07490 067fc23ba964cb203070c17bc139b860 244 SUPERFAMILY SSF51206 18 157 3.93E-31 T 13-09-2016 IPR018490 Cyclic nucleotide-binding-like PMA3_RS14865 496a6ba48119e8c2738a54da1c5ceede 447 PANTHER PTHR12586:SF3 1 446 7.4E-194 T 13-09-2016 PMA3_RS14865 496a6ba48119e8c2738a54da1c5ceede 447 Gene3D G3DSA:3.30.870.10 249 407 2.6E-16 T 13-09-2016 PMA3_RS14865 496a6ba48119e8c2738a54da1c5ceede 447 Gene3D G3DSA:3.30.870.10 22 184 7.2E-16 T 13-09-2016 PMA3_RS14865 496a6ba48119e8c2738a54da1c5ceede 447 SUPERFAMILY SSF56024 249 423 2.62E-23 T 13-09-2016 PMA3_RS14865 496a6ba48119e8c2738a54da1c5ceede 447 SMART SM00155 348 375 3.0E-4 T 13-09-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PMA3_RS14865 496a6ba48119e8c2738a54da1c5ceede 447 SMART SM00155 128 154 0.022 T 13-09-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PMA3_RS14865 496a6ba48119e8c2738a54da1c5ceede 447 Pfam PF13091 PLD-like domain 252 405 1.4E-23 T 13-09-2016 IPR025202 Phospholipase D-like domain PMA3_RS14865 496a6ba48119e8c2738a54da1c5ceede 447 PIRSF PIRSF000850 3 447 1.8E-187 T 13-09-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 PMA3_RS14865 496a6ba48119e8c2738a54da1c5ceede 447 SUPERFAMILY SSF56024 16 192 1.48E-25 T 13-09-2016 PMA3_RS14865 496a6ba48119e8c2738a54da1c5ceede 447 PANTHER PTHR12586 1 446 7.4E-194 T 13-09-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 SUPERFAMILY SSF50331 113 178 1.76E-15 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 Gene3D G3DSA:2.40.50.100 111 173 1.5E-24 T 13-09-2016 PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 Gene3D G3DSA:2.40.50.100 174 243 1.3E-10 T 13-09-2016 PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 PANTHER PTHR30432 15 254 6.4E-44 T 13-09-2016 PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 Gene3D G3DSA:1.10.10.10 11 110 1.0E-37 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 113 177 2.3E-17 T 13-09-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 SUPERFAMILY SSF50331 189 252 5.95E-7 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 SUPERFAMILY SSF46785 9 99 1.48E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 Pfam PF03459 TOBE domain 189 249 1.4E-6 T 13-09-2016 IPR005116 Transport-associated OB, type 1 PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 Pfam PF03459 TOBE domain 115 177 8.1E-15 T 13-09-2016 IPR005116 Transport-associated OB, type 1 PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 79 3.1E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 15 102 2.4E-30 T 13-09-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal PMA3_RS27805 d03eb0d54482037db02b7c12bedf6c63 254 PIRSF PIRSF005763 2 254 5.3E-80 T 13-09-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 Gene3D G3DSA:2.40.30.10 174 304 4.0E-23 T 13-09-2016 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 624 1.2E-137 T 13-09-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 PANTHER PTHR23115:SF129 1 368 1.2E-126 T 13-09-2016 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 SUPERFAMILY SSF46785 434 504 5.71E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 Pfam PF00009 Elongation factor Tu GTP binding domain 2 164 1.7E-31 T 13-09-2016 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 Gene3D G3DSA:1.10.10.10 507 563 4.3E-8 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 159 2.7E-12 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 Pfam PF09107 Elongation factor SelB, winged helix 579 623 2.0E-18 T 13-09-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 Gene3D G3DSA:1.10.10.10 568 624 9.2E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 Pfam PF09106 Elongation factor SelB, winged helix 443 499 1.8E-13 T 13-09-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 SUPERFAMILY SSF52540 2 192 1.09E-40 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 13-09-2016 IPR031157 Tr-type G domain, conserved site PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 SUPERFAMILY SSF46785 572 624 1.97E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 Gene3D G3DSA:3.40.50.300 3 164 9.5E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 SUPERFAMILY SSF50447 172 261 1.15E-16 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 Gene3D G3DSA:1.10.10.10 434 500 8.5E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 PANTHER PTHR23115 1 368 1.2E-126 T 13-09-2016 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 SUPERFAMILY SSF46785 506 564 2.36E-10 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 SUPERFAMILY SSF50465 270 367 2.34E-17 T 13-09-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 PRINTS PR00315 GTP-binding elongation factor signature 71 82 5.9E-6 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 PRINTS PR00315 GTP-binding elongation factor signature 55 65 5.9E-6 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 PRINTS PR00315 GTP-binding elongation factor signature 108 117 5.9E-6 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS13880 5e5c671e7a91ab6f274adc5d7291fafd 635 PRINTS PR00315 GTP-binding elongation factor signature 2 15 5.9E-6 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 105 286 1.4E-23 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 Pfam PF01464 Transglycosylase SLT domain 326 434 8.0E-19 T 13-09-2016 IPR008258 Transglycosylase SLT domain 1 PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 Gene3D G3DSA:3.40.190.10 57 146 8.6E-16 T 13-09-2016 PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 Gene3D G3DSA:3.40.190.10 259 289 8.6E-16 T 13-09-2016 PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 SMART SM00062 61 305 3.8E-14 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 Gene3D G3DSA:1.10.530.10 321 484 1.5E-36 T 13-09-2016 PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 SUPERFAMILY SSF53850 59 292 5.12E-31 T 13-09-2016 PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 PANTHER PTHR21666 306 475 8.0E-32 T 13-09-2016 PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 PANTHER PTHR21666:SF206 306 475 8.0E-32 T 13-09-2016 PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 Gene3D G3DSA:3.40.190.10 147 247 4.7E-8 T 13-09-2016 PMA3_RS14200 e4b11a4cc37ac759fbd8f88c547b366c 499 SUPERFAMILY SSF53955 324 478 1.93E-33 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS19935 0d632cd5f2137375e2bd2c416676f05a 313 Gene3D G3DSA:3.40.190.10 182 265 1.7E-23 T 13-09-2016 PMA3_RS19935 0d632cd5f2137375e2bd2c416676f05a 313 SUPERFAMILY SSF53850 94 306 3.8E-43 T 13-09-2016 PMA3_RS19935 0d632cd5f2137375e2bd2c416676f05a 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.1E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19935 0d632cd5f2137375e2bd2c416676f05a 313 Gene3D G3DSA:1.10.10.10 9 92 1.6E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19935 0d632cd5f2137375e2bd2c416676f05a 313 SUPERFAMILY SSF46785 7 117 8.33E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19935 0d632cd5f2137375e2bd2c416676f05a 313 Gene3D G3DSA:3.40.190.10 98 181 1.9E-22 T 13-09-2016 PMA3_RS19935 0d632cd5f2137375e2bd2c416676f05a 313 PANTHER PTHR30537 1 310 3.5E-101 T 13-09-2016 PMA3_RS19935 0d632cd5f2137375e2bd2c416676f05a 313 Pfam PF03466 LysR substrate binding domain 94 300 1.1E-41 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS19935 0d632cd5f2137375e2bd2c416676f05a 313 PANTHER PTHR30537:SF5 1 310 3.5E-101 T 13-09-2016 PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 SUPERFAMILY SSF54826 6 130 1.44E-33 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 Gene3D G3DSA:3.30.390.10 4 127 1.7E-46 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 PANTHER PTHR13794:SF55 3 373 1.5E-124 T 13-09-2016 PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 9 129 2.6E-37 T 13-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 SUPERFAMILY SSF51604 117 372 3.01E-65 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 195 226 - T 13-09-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 Pfam PF13378 Enolase C-terminal domain-like 152 365 2.1E-46 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 PANTHER PTHR13794 3 373 1.5E-124 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 6 373 6.4E-162 T 13-09-2016 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 SMART SM00922 148 245 3.2E-19 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 104 129 - T 13-09-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PMA3_RS10960 2503cee408e166906c9e1c59459656c3 382 Gene3D G3DSA:3.20.20.120 128 360 1.3E-66 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 Gene3D G3DSA:3.30.300.30 458 558 3.2E-30 T 13-09-2016 PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 Gene3D G3DSA:3.40.50.980 22 145 9.6E-35 T 13-09-2016 PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 Gene3D G3DSA:3.40.50.980 185 218 9.6E-35 T 13-09-2016 PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 Pfam PF00501 AMP-binding enzyme 31 461 2.5E-109 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 PANTHER PTHR24096 177 554 8.6E-178 T 13-09-2016 PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 PANTHER PTHR24096 9 161 8.6E-178 T 13-09-2016 PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 Gene3D G3DSA:3.40.50.980 219 379 9.6E-41 T 13-09-2016 PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 Gene3D G3DSA:2.30.38.10 380 452 5.5E-28 T 13-09-2016 PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 545 1.9E-17 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS22995 ef0ac217fa42bfe46d8dbb2adb67e14f 566 SUPERFAMILY SSF56801 17 557 8.24E-149 T 13-09-2016 PMA3_RS26695 e5b27e34c8fd6dda1b10b565d6822e11 506 SUPERFAMILY SSF53720 12 497 4.71E-162 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS26695 e5b27e34c8fd6dda1b10b565d6822e11 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS26695 e5b27e34c8fd6dda1b10b565d6822e11 506 PANTHER PTHR11699 1 506 0.0 T 13-09-2016 PMA3_RS26695 e5b27e34c8fd6dda1b10b565d6822e11 506 Gene3D G3DSA:3.40.309.10 270 469 2.7E-62 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS26695 e5b27e34c8fd6dda1b10b565d6822e11 506 Gene3D G3DSA:3.40.605.10 18 269 1.0E-91 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26695 e5b27e34c8fd6dda1b10b565d6822e11 506 Pfam PF00171 Aldehyde dehydrogenase family 32 493 4.5E-164 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26695 e5b27e34c8fd6dda1b10b565d6822e11 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS26695 e5b27e34c8fd6dda1b10b565d6822e11 506 PANTHER PTHR11699:SF97 1 506 0.0 T 13-09-2016 PMA3_RS25965 a388cd27ce7fe0af0953f28571645329 260 PANTHER PTHR37958 1 259 1.2E-33 T 13-09-2016 PMA3_RS25965 a388cd27ce7fe0af0953f28571645329 260 PANTHER PTHR37958:SF1 1 259 1.2E-33 T 13-09-2016 PMA3_RS25965 a388cd27ce7fe0af0953f28571645329 260 Pfam PF01699 Sodium/calcium exchanger protein 5 82 1.4E-5 T 13-09-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 PMA3_RS25965 a388cd27ce7fe0af0953f28571645329 260 Pfam PF01699 Sodium/calcium exchanger protein 115 257 2.1E-6 T 13-09-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 PMA3_RS27095 cdbd091d6678a11eccf5dcb42af19c2f 142 PANTHER PTHR40043 7 139 6.6E-35 T 13-09-2016 PMA3_RS27095 cdbd091d6678a11eccf5dcb42af19c2f 142 PANTHER PTHR40043:SF1 7 139 6.6E-35 T 13-09-2016 PMA3_RS27095 cdbd091d6678a11eccf5dcb42af19c2f 142 Pfam PF03994 Domain of Unknown Function (DUF350) 20 70 2.2E-13 T 13-09-2016 IPR007140 Protein of unknown function DUF350 PMA3_RS27095 cdbd091d6678a11eccf5dcb42af19c2f 142 Pfam PF03994 Domain of Unknown Function (DUF350) 85 137 2.6E-9 T 13-09-2016 IPR007140 Protein of unknown function DUF350 PMA3_RS19545 9e85fee6c5b48209da4844cbad2c10ec 335 Pfam PF13409 Glutathione S-transferase, N-terminal domain 61 156 7.8E-23 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS19545 9e85fee6c5b48209da4844cbad2c10ec 335 PIRSF PIRSF015753 4 322 6.1E-135 T 13-09-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 PMA3_RS19545 9e85fee6c5b48209da4844cbad2c10ec 335 PANTHER PTHR32419 1 327 3.4E-177 T 13-09-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 PMA3_RS19545 9e85fee6c5b48209da4844cbad2c10ec 335 SUPERFAMILY SSF47616 174 322 1.81E-37 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS19545 9e85fee6c5b48209da4844cbad2c10ec 335 Pfam PF13410 Glutathione S-transferase, C-terminal domain 202 273 6.6E-12 T 13-09-2016 PMA3_RS19545 9e85fee6c5b48209da4844cbad2c10ec 335 PANTHER PTHR32419:SF6 1 327 3.4E-177 T 13-09-2016 PMA3_RS19545 9e85fee6c5b48209da4844cbad2c10ec 335 Gene3D G3DSA:1.20.1050.10 173 286 5.7E-27 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS19545 9e85fee6c5b48209da4844cbad2c10ec 335 SUPERFAMILY SSF52833 40 160 4.3E-17 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS19545 9e85fee6c5b48209da4844cbad2c10ec 335 Gene3D G3DSA:3.40.30.10 40 172 3.4E-19 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 Gene3D G3DSA:3.40.50.270 2 144 3.5E-45 T 13-09-2016 PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 5.3E-24 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 99 112 5.3E-24 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 43 59 5.3E-24 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 77 92 5.3E-24 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 115 130 5.3E-24 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 SMART SM00226 3 143 4.7E-47 T 13-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 PANTHER PTHR11717 1 144 3.9E-39 T 13-09-2016 PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 PANTHER PTHR11717:SF20 1 144 3.9E-39 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 SUPERFAMILY SSF52788 1 144 5.1E-41 T 13-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PMA3_RS08520 5effe93f75af4d830674f03b7dfb441e 144 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 140 9.7E-40 T 13-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 256 5.9E-27 T 13-09-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 PANTHER PTHR23416:SF8 1 250 4.4E-123 T 13-09-2016 PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 PANTHER PTHR23416 1 250 4.4E-123 T 13-09-2016 PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 PIRSF PIRSF000456 1 258 2.6E-96 T 13-09-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 137 8.1E-8 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 6 35 1.7E-5 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 SUPERFAMILY SSF51161 3 258 5.99E-76 T 13-09-2016 IPR011004 Trimeric LpxA-like PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 Gene3D G3DSA:1.20.1180.10 193 258 3.5E-25 T 13-09-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 4 32 - T 13-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 Gene3D G3DSA:2.160.10.10 3 189 2.1E-48 T 13-09-2016 PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 256 1.1E-92 T 13-09-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PMA3_RS04885 084a9742326e8e62c1d67e17af64d075 258 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 258 44.119 T 13-09-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PMA3_RS05640 f14512ed7ae51eb652546e6e5256f17a 488 PANTHER PTHR11699:SF197 1 453 2.2E-288 T 13-09-2016 PMA3_RS05640 f14512ed7ae51eb652546e6e5256f17a 488 Gene3D G3DSA:3.40.309.10 258 444 2.3E-43 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS05640 f14512ed7ae51eb652546e6e5256f17a 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS05640 f14512ed7ae51eb652546e6e5256f17a 488 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 4 487 1.0E-254 T 13-09-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 PMA3_RS05640 f14512ed7ae51eb652546e6e5256f17a 488 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 2 487 59.063 T 13-09-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 PMA3_RS05640 f14512ed7ae51eb652546e6e5256f17a 488 SUPERFAMILY SSF53720 3 456 2.09E-125 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS05640 f14512ed7ae51eb652546e6e5256f17a 488 Pfam PF00171 Aldehyde dehydrogenase family 10 461 8.0E-124 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS05640 f14512ed7ae51eb652546e6e5256f17a 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS05640 f14512ed7ae51eb652546e6e5256f17a 488 PANTHER PTHR11699 1 453 2.2E-288 T 13-09-2016 PMA3_RS05640 f14512ed7ae51eb652546e6e5256f17a 488 Gene3D G3DSA:3.40.605.10 3 257 4.8E-76 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS12585 3cc49ce8b04937bfcd81bc96d066cca6 154 SUPERFAMILY SSF46785 13 152 9.52E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12585 3cc49ce8b04937bfcd81bc96d066cca6 154 PANTHER PTHR33164:SF8 11 151 5.9E-26 T 13-09-2016 PMA3_RS12585 3cc49ce8b04937bfcd81bc96d066cca6 154 PANTHER PTHR33164 11 151 5.9E-26 T 13-09-2016 PMA3_RS12585 3cc49ce8b04937bfcd81bc96d066cca6 154 SMART SM00347 38 138 3.2E-10 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS12585 3cc49ce8b04937bfcd81bc96d066cca6 154 Pfam PF13463 Winged helix DNA-binding domain 45 111 3.7E-11 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS12585 3cc49ce8b04937bfcd81bc96d066cca6 154 Gene3D G3DSA:1.10.10.10 10 150 1.1E-31 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00150 b71a507ab1ee322a8d418d31d2d4d9ae 683 Gene3D G3DSA:1.20.1050.40 11 141 6.9E-26 T 13-09-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal PMA3_RS00150 b71a507ab1ee322a8d418d31d2d4d9ae 683 PANTHER PTHR11804:SF8 4 679 0.0 T 13-09-2016 PMA3_RS00150 b71a507ab1ee322a8d418d31d2d4d9ae 683 Gene3D G3DSA:3.40.390.10 360 505 7.1E-59 T 13-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PMA3_RS00150 b71a507ab1ee322a8d418d31d2d4d9ae 683 PANTHER PTHR11804 4 679 0.0 T 13-09-2016 PMA3_RS00150 b71a507ab1ee322a8d418d31d2d4d9ae 683 SUPERFAMILY SSF55486 4 676 6.32E-204 T 13-09-2016 PMA3_RS00150 b71a507ab1ee322a8d418d31d2d4d9ae 683 Pfam PF01432 Peptidase family M3 225 676 1.1E-150 T 13-09-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 PMA3_RS00150 b71a507ab1ee322a8d418d31d2d4d9ae 683 Gene3D G3DSA:1.10.1370.10 143 351 5.3E-138 T 13-09-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PMA3_RS00150 b71a507ab1ee322a8d418d31d2d4d9ae 683 Gene3D G3DSA:1.10.1370.10 506 678 5.3E-138 T 13-09-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PMA3_RS16910 2c8847facf7b915b56fac9eeed900871 847 Pfam PF13283 Bacteriophage N adsorption protein A C-term 659 842 3.7E-67 T 13-09-2016 IPR025137 Bacteriophage N4 adsorption protein A, C-terminal PMA3_RS16910 2c8847facf7b915b56fac9eeed900871 847 Gene3D G3DSA:1.25.40.10 37 314 3.8E-14 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS16910 2c8847facf7b915b56fac9eeed900871 847 Gene3D G3DSA:1.25.40.10 376 566 1.9E-18 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS16910 2c8847facf7b915b56fac9eeed900871 847 SMART SM00028 33 66 120.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS16910 2c8847facf7b915b56fac9eeed900871 847 SMART SM00028 370 403 340.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS16910 2c8847facf7b915b56fac9eeed900871 847 SMART SM00028 438 471 47.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS16910 2c8847facf7b915b56fac9eeed900871 847 SMART SM00028 247 280 23.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS16910 2c8847facf7b915b56fac9eeed900871 847 SUPERFAMILY SSF48452 180 315 1.45E-9 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS16910 2c8847facf7b915b56fac9eeed900871 847 SUPERFAMILY SSF48452 38 171 9.27E-6 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS16910 2c8847facf7b915b56fac9eeed900871 847 SUPERFAMILY SSF48452 376 566 1.52E-13 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 163 27.201 T 13-09-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 PANTHER PTHR30437:SF6 1 165 6.5E-87 T 13-09-2016 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 Gene3D G3DSA:1.10.287.180 13 84 4.1E-23 T 13-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 165 50.943 T 13-09-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 165 1.3E-72 T 13-09-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 92 164 1.6E-24 T 13-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 5.4E-23 T 13-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 PANTHER PTHR30437 1 165 6.5E-87 T 13-09-2016 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 Gene3D G3DSA:3.10.50.30 85 164 4.7E-30 T 13-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 PIRSF PIRSF006092 10 165 1.3E-47 T 13-09-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 SUPERFAMILY SSF46557 13 85 3.14E-23 T 13-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PMA3_RS07605 867f94788ff038c57bbf3680b5036f79 165 SUPERFAMILY SSF54534 90 164 5.76E-22 T 13-09-2016 PMA3_RS28370 32f8795353235dd70a037ff75e417064 556 PANTHER PTHR13707:SF27 83 275 8.7E-92 T 13-09-2016 PMA3_RS28370 32f8795353235dd70a037ff75e417064 556 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 10 556 3.8E-294 T 13-09-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 PMA3_RS28370 32f8795353235dd70a037ff75e417064 556 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 556 0.0 T 13-09-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 PMA3_RS28370 32f8795353235dd70a037ff75e417064 556 Gene3D G3DSA:3.40.1080.10 44 219 3.1E-4 T 13-09-2016 PMA3_RS28370 32f8795353235dd70a037ff75e417064 556 SUPERFAMILY SSF100950 230 389 5.23E-22 T 13-09-2016 PMA3_RS28370 32f8795353235dd70a037ff75e417064 556 SUPERFAMILY SSF100950 417 500 5.23E-22 T 13-09-2016 PMA3_RS28370 32f8795353235dd70a037ff75e417064 556 PANTHER PTHR13707 83 275 8.7E-92 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS28370 32f8795353235dd70a037ff75e417064 556 SUPERFAMILY SSF100950 38 282 6.84E-32 T 13-09-2016 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 SMART SM00342 222 305 6.5E-25 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 Gene3D G3DSA:1.10.10.60 259 303 5.5E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 Gene3D G3DSA:1.10.10.60 206 258 3.1E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 PANTHER PTHR11019 50 304 2.6E-46 T 13-09-2016 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 PANTHER PTHR11019 6 25 2.6E-46 T 13-09-2016 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 Gene3D G3DSA:3.40.50.880 3 190 2.8E-24 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 SUPERFAMILY SSF52317 3 190 3.88E-29 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 Pfam PF01965 DJ-1/PfpI family 21 168 1.2E-10 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 SUPERFAMILY SSF46689 258 304 6.72E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 SUPERFAMILY SSF46689 208 256 5.98E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 259 301 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 Pfam PF12833 Helix-turn-helix domain 228 303 1.6E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 PANTHER PTHR11019:SF90 50 304 2.6E-46 T 13-09-2016 PMA3_RS10240 ede6a438c276eb9feb028f25979d02fe 309 PANTHER PTHR11019:SF90 6 25 2.6E-46 T 13-09-2016 PMA3_RS04920 870d104f262c4650db1f609ca14058fa 281 Gene3D G3DSA:3.20.20.70 16 278 1.5E-107 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS04920 870d104f262c4650db1f609ca14058fa 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 275 48.251 T 13-09-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PMA3_RS04920 870d104f262c4650db1f609ca14058fa 281 SUPERFAMILY SSF51569 3 276 2.66E-103 T 13-09-2016 PMA3_RS04920 870d104f262c4650db1f609ca14058fa 281 PANTHER PTHR21057:SF6 1 281 1.0E-204 T 13-09-2016 PMA3_RS04920 870d104f262c4650db1f609ca14058fa 281 PANTHER PTHR21057 1 281 1.0E-204 T 13-09-2016 PMA3_RS04920 870d104f262c4650db1f609ca14058fa 281 Pfam PF00793 DAHP synthetase I family 9 273 1.1E-77 T 13-09-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PMA3_RS04920 870d104f262c4650db1f609ca14058fa 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 273 1.2E-115 T 13-09-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PMA3_RS02950 e58a0fa8cb5d466742a8781082face1a 633 Gene3D G3DSA:3.20.20.150 1 264 8.7E-81 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS02950 e58a0fa8cb5d466742a8781082face1a 633 Gene3D G3DSA:3.10.180.10 287 420 2.4E-33 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS02950 e58a0fa8cb5d466742a8781082face1a 633 PANTHER PTHR12110:SF14 1 275 2.3E-87 T 13-09-2016 PMA3_RS02950 e58a0fa8cb5d466742a8781082face1a 633 Pfam PF01261 Xylose isomerase-like TIM barrel 18 217 8.3E-40 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS02950 e58a0fa8cb5d466742a8781082face1a 633 SUPERFAMILY SSF54593 293 619 8.29E-63 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS02950 e58a0fa8cb5d466742a8781082face1a 633 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 438 561 9.4E-10 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS02950 e58a0fa8cb5d466742a8781082face1a 633 PANTHER PTHR12110 1 275 2.3E-87 T 13-09-2016 PMA3_RS02950 e58a0fa8cb5d466742a8781082face1a 633 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 294 425 1.6E-32 T 13-09-2016 PMA3_RS02950 e58a0fa8cb5d466742a8781082face1a 633 SUPERFAMILY SSF51658 1 269 1.52E-77 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS02950 e58a0fa8cb5d466742a8781082face1a 633 Gene3D G3DSA:3.10.180.10 435 622 1.3E-43 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 SUPERFAMILY SSF47384 194 277 4.32E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 Gene3D G3DSA:1.10.287.130 204 273 6.6E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 SMART SM00388 211 277 4.4E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 Gene3D G3DSA:3.30.565.10 287 421 7.6E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 Pfam PF00672 HAMP domain 137 207 2.4E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 SUPERFAMILY SSF55874 287 421 9.04E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 SMART SM00387 321 425 4.0E-26 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 PANTHER PTHR24423 2 13 5.0E-54 T 13-09-2016 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 PANTHER PTHR24423 150 421 5.0E-54 T 13-09-2016 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 422 7.0E-16 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 SMART SM00304 156 210 2.0E-5 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 3.5E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 3.5E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 3.5E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 3.5E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23660 31937245f33c803c29e581b94b4f7ba1 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 275 6.9E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS16590 44065bfea2b755ac182d69886355b49a 462 Gene3D G3DSA:3.30.70.270 363 421 1.2E-4 T 13-09-2016 PMA3_RS16590 44065bfea2b755ac182d69886355b49a 462 SUPERFAMILY SSF55073 329 423 4.87E-6 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS16590 44065bfea2b755ac182d69886355b49a 462 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 426 9.0E-6 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS04795 ec458b687b4150dc77315c00d5dbe18b 344 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 132 172 7.4E-16 T 13-09-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PMA3_RS04795 ec458b687b4150dc77315c00d5dbe18b 344 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 344 3.3E-189 T 13-09-2016 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PMA3_RS04795 ec458b687b4150dc77315c00d5dbe18b 344 Gene3D G3DSA:2.160.10.10 173 341 8.4E-33 T 13-09-2016 PMA3_RS04795 ec458b687b4150dc77315c00d5dbe18b 344 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 254 286 8.4E-12 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS04795 ec458b687b4150dc77315c00d5dbe18b 344 SUPERFAMILY SSF51161 97 320 1.21E-34 T 13-09-2016 IPR011004 Trimeric LpxA-like PMA3_RS04795 ec458b687b4150dc77315c00d5dbe18b 344 Gene3D G3DSA:3.30.60.70 132 172 1.2E-18 T 13-09-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PMA3_RS04795 ec458b687b4150dc77315c00d5dbe18b 344 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 4 341 44.2 T 13-09-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PMA3_RS26620 64f23b9fd22753956755fbd79743d80d 438 Gene3D G3DSA:1.20.144.10 226 402 2.8E-32 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS26620 64f23b9fd22753956755fbd79743d80d 438 SMART SM00014 283 393 3.0E-19 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS26620 64f23b9fd22753956755fbd79743d80d 438 SUPERFAMILY SSF48317 203 407 2.35E-41 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS26620 64f23b9fd22753956755fbd79743d80d 438 Pfam PF09335 SNARE associated Golgi protein 39 162 2.8E-19 T 13-09-2016 IPR032816 SNARE associated Golgi protein PMA3_RS26620 64f23b9fd22753956755fbd79743d80d 438 PANTHER PTHR30353:SF5 1 415 3.9E-167 T 13-09-2016 PMA3_RS26620 64f23b9fd22753956755fbd79743d80d 438 PANTHER PTHR30353 1 415 3.9E-167 T 13-09-2016 IPR032818 DedA family PMA3_RS26620 64f23b9fd22753956755fbd79743d80d 438 Pfam PF01569 PAP2 superfamily 285 399 3.6E-20 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS20905 6b0983a6770c1050a516c1e3646e0eb8 187 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 177 4.0E-63 T 13-09-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PMA3_RS20905 6b0983a6770c1050a516c1e3646e0eb8 187 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 180 6.2E-74 T 13-09-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PMA3_RS20905 6b0983a6770c1050a516c1e3646e0eb8 187 SUPERFAMILY SSF51182 1 182 4.9E-75 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS20905 6b0983a6770c1050a516c1e3646e0eb8 187 PANTHER PTHR21047 1 181 3.5E-72 T 13-09-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PMA3_RS20905 6b0983a6770c1050a516c1e3646e0eb8 187 Gene3D G3DSA:2.60.120.10 1 182 2.0E-79 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS20905 6b0983a6770c1050a516c1e3646e0eb8 187 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 181 2.1E-73 T 13-09-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PMA3_RS20905 6b0983a6770c1050a516c1e3646e0eb8 187 PANTHER PTHR21047:SF2 1 181 3.5E-72 T 13-09-2016 PMA3_RS02010 4e0bbb28db1e0ba005383f1d2ecded4a 342 SUPERFAMILY SSF103088 164 269 9.03E-22 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS02010 4e0bbb28db1e0ba005383f1d2ecded4a 342 PANTHER PTHR30329 1 293 5.9E-120 T 13-09-2016 PMA3_RS02010 4e0bbb28db1e0ba005383f1d2ecded4a 342 Gene3D G3DSA:3.30.1330.60 161 269 1.0E-18 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS02010 4e0bbb28db1e0ba005383f1d2ecded4a 342 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 15 63 1.8E-16 T 13-09-2016 IPR025713 Motility protein B, N-terminal domain PMA3_RS02010 4e0bbb28db1e0ba005383f1d2ecded4a 342 PANTHER PTHR30329:SF2 1 293 5.9E-120 T 13-09-2016 PMA3_RS02010 4e0bbb28db1e0ba005383f1d2ecded4a 342 Pfam PF00691 OmpA family 166 255 2.1E-13 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS03815 96827030b38b4bb6d303f642994068dd 313 SUPERFAMILY SSF46955 27 119 5.49E-19 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS03815 96827030b38b4bb6d303f642994068dd 313 PANTHER PTHR30204:SF19 18 260 1.7E-68 T 13-09-2016 PMA3_RS03815 96827030b38b4bb6d303f642994068dd 313 Gene3D G3DSA:1.10.1660.10 27 118 5.0E-20 T 13-09-2016 PMA3_RS03815 96827030b38b4bb6d303f642994068dd 313 PANTHER PTHR30204 18 260 1.7E-68 T 13-09-2016 PMA3_RS03815 96827030b38b4bb6d303f642994068dd 313 Pfam PF13411 MerR HTH family regulatory protein 27 93 2.2E-17 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS03815 96827030b38b4bb6d303f642994068dd 313 SMART SM00422 26 95 4.7E-23 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS08790 b46165ddb10de7e69ea8d01247c337d0 340 Pfam PF02780 Transketolase, C-terminal domain 210 332 2.1E-28 T 13-09-2016 IPR033248 Transketolase, C-terminal domain PMA3_RS08790 b46165ddb10de7e69ea8d01247c337d0 340 Gene3D G3DSA:3.40.50.920 211 340 2.8E-36 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS08790 b46165ddb10de7e69ea8d01247c337d0 340 SMART SM00861 33 198 6.8E-45 T 13-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PMA3_RS08790 b46165ddb10de7e69ea8d01247c337d0 340 PANTHER PTHR11624:SF2 34 340 2.1E-96 T 13-09-2016 PMA3_RS08790 b46165ddb10de7e69ea8d01247c337d0 340 SUPERFAMILY SSF52922 204 340 6.02E-33 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS08790 b46165ddb10de7e69ea8d01247c337d0 340 Pfam PF02779 Transketolase, pyrimidine binding domain 37 197 7.3E-36 T 13-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PMA3_RS08790 b46165ddb10de7e69ea8d01247c337d0 340 SUPERFAMILY SSF52518 18 198 1.87E-49 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS08790 b46165ddb10de7e69ea8d01247c337d0 340 PANTHER PTHR11624 34 340 2.1E-96 T 13-09-2016 IPR033247 Transketolase family PMA3_RS08790 b46165ddb10de7e69ea8d01247c337d0 340 Gene3D G3DSA:3.40.50.970 30 210 1.4E-52 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS21600 674a647294796812963cd983b0c54646 127 PANTHER PTHR26402 5 125 3.7E-42 T 13-09-2016 PMA3_RS21600 674a647294796812963cd983b0c54646 127 Gene3D G3DSA:3.40.50.2300 3 125 2.3E-39 T 13-09-2016 PMA3_RS21600 674a647294796812963cd983b0c54646 127 SMART SM00448 5 119 5.8E-35 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21600 674a647294796812963cd983b0c54646 127 Pfam PF00072 Response regulator receiver domain 7 120 1.5E-30 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21600 674a647294796812963cd983b0c54646 127 SUPERFAMILY SSF52172 3 125 4.27E-37 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS29135 796bd16e933f5cf7978ee214bab348f7 245 SUPERFAMILY SSF52540 3 236 7.68E-77 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29135 796bd16e933f5cf7978ee214bab348f7 245 SMART SM00382 28 215 5.4E-20 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS29135 796bd16e933f5cf7978ee214bab348f7 245 PANTHER PTHR24220 5 242 2.5E-127 T 13-09-2016 PMA3_RS29135 796bd16e933f5cf7978ee214bab348f7 245 PANTHER PTHR24220:SF550 5 242 2.5E-127 T 13-09-2016 PMA3_RS29135 796bd16e933f5cf7978ee214bab348f7 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS29135 796bd16e933f5cf7978ee214bab348f7 245 PIRSF PIRSF039085 1 243 1.1E-106 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS29135 796bd16e933f5cf7978ee214bab348f7 245 Pfam PF00005 ABC transporter 19 167 1.4E-35 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS29135 796bd16e933f5cf7978ee214bab348f7 245 Gene3D G3DSA:3.40.50.300 1 238 4.2E-83 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 Pfam PF11870 Domain of unknown function (DUF3390) 391 477 3.7E-26 T 13-09-2016 IPR024569 4Fe-4S binding protein, C-terminal PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 Gene3D G3DSA:3.40.50.10420 195 301 2.1E-52 T 13-09-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 Gene3D G3DSA:3.40.50.10420 71 134 2.1E-52 T 13-09-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 PANTHER PTHR32479:SF10 1 479 1.4E-152 T 13-09-2016 PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 76 300 4.5E-54 T 13-09-2016 IPR003741 LUD domain PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 Pfam PF13183 4Fe-4S dicluster domain 317 383 1.8E-8 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 SUPERFAMILY SSF100950 71 95 5.02E-44 T 13-09-2016 PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 SUPERFAMILY SSF100950 141 301 5.02E-44 T 13-09-2016 PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 PANTHER PTHR32479 1 479 1.4E-152 T 13-09-2016 PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 SUPERFAMILY SSF46548 290 397 1.12E-16 T 13-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 319 330 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 24 440 2.8E-147 T 13-09-2016 IPR004452 4Fe-4S binding protein GO:0019516 PMA3_RS25640 01be59c26c9a54222f04b95df7d22cac 484 Gene3D G3DSA:1.10.1060.10 311 399 9.6E-13 T 13-09-2016 PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 PANTHER PTHR22749 1 305 3.6E-128 T 13-09-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 SUPERFAMILY SSF52374 15 174 6.76E-31 T 13-09-2016 PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 304 6.3E-94 T 13-09-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 Pfam PF06574 FAD synthetase 12 166 1.1E-53 T 13-09-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 SUPERFAMILY SSF82114 175 307 1.02E-42 T 13-09-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 PIRSF PIRSF004491 1 310 8.6E-100 T 13-09-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 Pfam PF01687 Riboflavin kinase 184 304 5.3E-36 T 13-09-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 PANTHER PTHR22749:SF0 1 305 3.6E-128 T 13-09-2016 PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 Gene3D G3DSA:2.40.30.30 180 306 9.8E-39 T 13-09-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 Gene3D G3DSA:3.40.50.620 1 179 9.4E-65 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS03210 5e09d55d52c813c4fc46a098b37e2d63 316 SMART SM00904 183 307 2.2E-57 T 13-09-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 PANTHER PTHR11615:SF112 25 73 4.6E-241 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Gene3D G3DSA:2.40.40.20 771 924 4.4E-41 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 SMART SM00926 241 295 2.6E-16 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 246 921 1.3E-279 T 13-09-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 SUPERFAMILY SSF50692 781 923 2.71E-40 T 13-09-2016 IPR009010 Aspartate decarboxylase-like domain PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 SUPERFAMILY SSF54862 97 236 4.18E-37 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Gene3D G3DSA:3.30.70.20 221 253 4.3E-4 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Gene3D G3DSA:3.10.20.30 18 74 1.9E-7 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 PANTHER PTHR11615 239 941 4.6E-241 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 PANTHER PTHR11615 25 73 4.6E-241 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 SUPERFAMILY SSF53706 241 778 1.7E-195 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 214 225 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 SMART SM00929 105 145 7.1E-19 T 13-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 23 99 2.0E-22 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 105 144 3.7E-17 T 13-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 SUPERFAMILY SSF54292 23 96 2.57E-18 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Gene3D G3DSA:2.20.25.90 254 296 1.6E-19 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 242 293 1.5E-15 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 PANTHER PTHR11615:SF112 239 941 4.6E-241 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Gene3D G3DSA:3.40.228.10 376 567 6.8E-57 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Gene3D G3DSA:3.40.50.740 568 770 2.6E-90 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Gene3D G3DSA:3.40.50.740 298 375 2.6E-90 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 PIRSF PIRSF036643 19 960 0.0 T 13-09-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 851 878 - T 13-09-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Pfam PF01568 Molydopterin dinucleotide binding domain 813 917 3.5E-27 T 13-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Gene3D G3DSA:3.30.70.20 158 220 9.7E-15 T 13-09-2016 PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Pfam PF00037 4Fe-4S binding domain 211 227 1.4E-5 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS24380 b0c8af562e1b8cdf039279b297c7342f 960 Pfam PF00384 Molybdopterin oxidoreductase 298 728 5.0E-75 T 13-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 SUPERFAMILY SSF47005 131 177 4.84E-11 T 13-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 SUPERFAMILY SSF52777 185 422 8.9E-77 T 13-09-2016 PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 Gene3D G3DSA:3.30.559.10 185 422 3.6E-80 T 13-09-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 Pfam PF00364 Biotin-requiring enzyme 5 77 1.3E-15 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 193 422 8.8E-78 T 13-09-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 Pfam PF02817 e3 binding domain 137 172 1.0E-10 T 13-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 Gene3D G3DSA:4.10.320.10 134 182 2.7E-17 T 13-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 Gene3D G3DSA:2.40.50.100 3 90 1.3E-20 T 13-09-2016 PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 PANTHER PTHR23151 1 424 6.5E-195 T 13-09-2016 PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 PANTHER PTHR23151:SF62 1 424 6.5E-195 T 13-09-2016 PMA3_RS15780 13f8405cdcc8d6ef5978763de0545715 424 SUPERFAMILY SSF51230 3 88 2.22E-22 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 SMART SM00341 211 290 2.0E-9 T 13-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 SUPERFAMILY SSF47819 195 301 5.79E-30 T 13-09-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 SUPERFAMILY SSF47819 297 370 7.1E-16 T 13-09-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 TIGRFAM TIGR01388 rnd: ribonuclease D 7 370 9.5E-129 T 13-09-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 Pfam PF00570 HRDC domain 214 281 2.8E-18 T 13-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 Pfam PF01612 3'-5' exonuclease 5 172 1.8E-40 T 13-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 SUPERFAMILY SSF53098 4 211 1.39E-63 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 Hamap MF_01899 Ribonuclease D [rnd]. 5 371 41.199 T 13-09-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 SMART SM00474 5 173 2.8E-40 T 13-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 Gene3D G3DSA:3.30.420.10 4 183 3.2E-18 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 PANTHER PTHR12124 309 329 7.2E-67 T 13-09-2016 PMA3_RS22370 93cb516b9b901f974ac586216535392f 377 PANTHER PTHR12124 5 286 7.2E-67 T 13-09-2016 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 Gene3D G3DSA:3.30.470.20 100 118 7.3E-48 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 Gene3D G3DSA:3.30.470.20 189 311 7.3E-48 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 78 89 - T 13-09-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 Gene3D G3DSA:3.40.50.20 19 99 3.4E-28 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 256 284 - T 13-09-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 Gene3D G3DSA:3.30.1490.20 122 188 2.7E-25 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 Pfam PF07478 D-ala D-ala ligase C-terminus 119 310 7.7E-55 T 13-09-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 SUPERFAMILY SSF56059 112 310 2.36E-59 T 13-09-2016 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 19 311 1.9E-105 T 13-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 Pfam PF01820 D-ala D-ala ligase N-terminus 19 101 6.4E-21 T 13-09-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 SUPERFAMILY SSF52440 19 111 1.25E-30 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 18 314 34.544 T 13-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04155 880672c5a701889b783e2701c5933d7e 330 PANTHER PTHR23132 19 320 1.1E-91 T 13-09-2016 PMA3_RS04160 fa3fb92a6da3d7ea1d3bed9a6c1acc8e 289 Pfam PF03799 Cell division protein FtsQ 146 264 2.2E-20 T 13-09-2016 IPR005548 Cell division protein FtsQ/DivIB PMA3_RS04160 fa3fb92a6da3d7ea1d3bed9a6c1acc8e 289 Pfam PF08478 POTRA domain, FtsQ-type 74 142 3.5E-18 T 13-09-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type PMA3_RS04160 fa3fb92a6da3d7ea1d3bed9a6c1acc8e 289 PANTHER PTHR35851 1 289 4.5E-71 T 13-09-2016 PMA3_RS04160 fa3fb92a6da3d7ea1d3bed9a6c1acc8e 289 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 43 272 23.426 T 13-09-2016 IPR026579 Cell division protein FtsQ GO:0000917 PMA3_RS04160 fa3fb92a6da3d7ea1d3bed9a6c1acc8e 289 PANTHER PTHR35851:SF1 1 289 4.5E-71 T 13-09-2016 PMA3_RS02750 c5f46e5f4fb7e545f5b2748adee32d15 549 Gene3D G3DSA:2.40.110.10 182 281 5.3E-19 T 13-09-2016 PMA3_RS02750 c5f46e5f4fb7e545f5b2748adee32d15 549 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 444 3.8E-26 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS02750 c5f46e5f4fb7e545f5b2748adee32d15 549 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 403 422 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS02750 c5f46e5f4fb7e545f5b2748adee32d15 549 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 182 279 2.0E-13 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS02750 c5f46e5f4fb7e545f5b2748adee32d15 549 SUPERFAMILY SSF47203 295 447 3.22E-40 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS02750 c5f46e5f4fb7e545f5b2748adee32d15 549 PANTHER PTHR10909:SF289 33 464 7.5E-203 T 13-09-2016 PMA3_RS02750 c5f46e5f4fb7e545f5b2748adee32d15 549 Gene3D G3DSA:1.20.140.10 282 449 6.3E-38 T 13-09-2016 PMA3_RS02750 c5f46e5f4fb7e545f5b2748adee32d15 549 SUPERFAMILY SSF56645 70 299 8.74E-37 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS02750 c5f46e5f4fb7e545f5b2748adee32d15 549 PANTHER PTHR10909 33 464 7.5E-203 T 13-09-2016 PMA3_RS24940 c002a05da8165e802e4ca1ec51d676a2 250 PANTHER PTHR37468 1 244 3.0E-88 T 13-09-2016 PMA3_RS24940 c002a05da8165e802e4ca1ec51d676a2 250 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 227 3.4E-36 T 13-09-2016 PMA3_RS24940 c002a05da8165e802e4ca1ec51d676a2 250 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 245 27.416 T 13-09-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 PMA3_RS10645 41f4e338f940d24f3764ab883654c5f1 394 PANTHER PTHR22935 1 394 2.1E-90 T 13-09-2016 PMA3_RS10645 41f4e338f940d24f3764ab883654c5f1 394 Pfam PF00144 Beta-lactamase 22 372 1.2E-62 T 13-09-2016 IPR001466 Beta-lactamase-related PMA3_RS10645 41f4e338f940d24f3764ab883654c5f1 394 SUPERFAMILY SSF56601 10 376 1.28E-80 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS10645 41f4e338f940d24f3764ab883654c5f1 394 PANTHER PTHR22935:SF77 1 394 2.1E-90 T 13-09-2016 PMA3_RS10645 41f4e338f940d24f3764ab883654c5f1 394 Gene3D G3DSA:3.40.710.10 21 371 3.6E-75 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 212 368 1.1E-46 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 SUPERFAMILY SSF55785 92 199 2.09E-26 T 13-09-2016 IPR000014 PAS domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 PANTHER PTHR10799:SF710 143 483 3.2E-89 T 13-09-2016 PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 208 371 8.4E-39 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 SMART SM00091 87 157 3.5E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 Gene3D G3DSA:3.20.20.450 388 633 2.0E-99 T 13-09-2016 IPR001633 EAL domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 Gene3D G3DSA:3.30.70.270 213 380 5.2E-56 T 13-09-2016 PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 PANTHER PTHR10799 143 483 3.2E-89 T 13-09-2016 PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 Pfam PF00563 EAL domain 390 624 9.8E-78 T 13-09-2016 IPR001633 EAL domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 SMART SM00267 201 373 8.0E-66 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 SMART SM00052 383 629 6.5E-119 T 13-09-2016 IPR001633 EAL domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 88 208 1.7E-16 T 13-09-2016 IPR000014 PAS domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 SUPERFAMILY SSF141868 390 631 3.27E-91 T 13-09-2016 IPR001633 EAL domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 Gene3D G3DSA:3.30.450.20 78 195 7.4E-26 T 13-09-2016 PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 Pfam PF13426 PAS domain 98 199 6.2E-14 T 13-09-2016 IPR000014 PAS domain PMA3_RS00560 dc7a250eb24c6257b9b830b7e4ae1fa4 639 SUPERFAMILY SSF55073 217 375 1.02E-49 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS03505 d00be3d94d7e76c0f22ed400d624b670 105 Pfam PF00355 Rieske [2Fe-2S] domain 8 86 2.2E-11 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS03505 d00be3d94d7e76c0f22ed400d624b670 105 PANTHER PTHR40261 9 103 5.4E-37 T 13-09-2016 PMA3_RS03505 d00be3d94d7e76c0f22ed400d624b670 105 Gene3D G3DSA:2.102.10.10 4 104 3.1E-23 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS03505 d00be3d94d7e76c0f22ed400d624b670 105 PANTHER PTHR40261:SF2 9 103 5.4E-37 T 13-09-2016 PMA3_RS03505 d00be3d94d7e76c0f22ed400d624b670 105 SUPERFAMILY SSF50022 3 103 8.25E-25 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS00430 a45c38485d548caf4fbcbd93103317e8 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 8.1E-11 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS00430 a45c38485d548caf4fbcbd93103317e8 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 8.1E-11 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS00430 a45c38485d548caf4fbcbd93103317e8 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 8.1E-11 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS00430 a45c38485d548caf4fbcbd93103317e8 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 8.1E-11 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS00430 a45c38485d548caf4fbcbd93103317e8 142 SUPERFAMILY SSF46785 3 131 2.54E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00430 a45c38485d548caf4fbcbd93103317e8 142 SMART SM00347 20 121 1.7E-9 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS00430 a45c38485d548caf4fbcbd93103317e8 142 PANTHER PTHR33164:SF16 12 129 4.5E-21 T 13-09-2016 PMA3_RS00430 a45c38485d548caf4fbcbd93103317e8 142 Gene3D G3DSA:1.10.10.10 3 131 5.0E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00430 a45c38485d548caf4fbcbd93103317e8 142 PANTHER PTHR33164 12 129 4.5E-21 T 13-09-2016 PMA3_RS00430 a45c38485d548caf4fbcbd93103317e8 142 Pfam PF13463 Winged helix DNA-binding domain 35 94 1.2E-6 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS29445 a358048ce213f04fe0f82db9e9e09d8b 477 PANTHER PTHR11751 89 467 1.1E-197 T 13-09-2016 PMA3_RS29445 a358048ce213f04fe0f82db9e9e09d8b 477 SMART SM00345 7 66 1.7E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS29445 a358048ce213f04fe0f82db9e9e09d8b 477 Pfam PF00155 Aminotransferase class I and II 124 461 6.0E-36 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS29445 a358048ce213f04fe0f82db9e9e09d8b 477 Gene3D G3DSA:3.40.640.10 139 352 7.2E-68 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS29445 a358048ce213f04fe0f82db9e9e09d8b 477 PANTHER PTHR11751:SF275 89 467 1.1E-197 T 13-09-2016 PMA3_RS29445 a358048ce213f04fe0f82db9e9e09d8b 477 Gene3D G3DSA:3.90.1150.10 353 463 1.2E-10 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS29445 a358048ce213f04fe0f82db9e9e09d8b 477 SUPERFAMILY SSF46785 1 73 3.22E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29445 a358048ce213f04fe0f82db9e9e09d8b 477 SUPERFAMILY SSF53383 85 464 5.17E-99 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS29445 a358048ce213f04fe0f82db9e9e09d8b 477 Gene3D G3DSA:1.10.10.10 1 66 6.5E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29445 a358048ce213f04fe0f82db9e9e09d8b 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.3E-14 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS24010 409c448eff6cc0d90103cc9101b9d18c 261 Pfam PF04954 Siderophore-interacting protein 142 255 3.1E-34 T 13-09-2016 IPR007037 Siderophore-interacting protein PMA3_RS24010 409c448eff6cc0d90103cc9101b9d18c 261 Pfam PF08021 Siderophore-interacting FAD-binding domain 22 134 8.9E-37 T 13-09-2016 IPR013113 FAD-binding 9, siderophore-interacting PMA3_RS24010 409c448eff6cc0d90103cc9101b9d18c 261 PANTHER PTHR30157 3 260 2.7E-85 T 13-09-2016 PMA3_RS24010 409c448eff6cc0d90103cc9101b9d18c 261 Gene3D G3DSA:3.40.50.80 137 260 6.4E-39 T 13-09-2016 PMA3_RS24010 409c448eff6cc0d90103cc9101b9d18c 261 SUPERFAMILY SSF63380 9 137 4.35E-14 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS24010 409c448eff6cc0d90103cc9101b9d18c 261 Gene3D G3DSA:2.40.30.10 12 133 2.1E-37 T 13-09-2016 PMA3_RS24010 409c448eff6cc0d90103cc9101b9d18c 261 PANTHER PTHR30157:SF1 3 260 2.7E-85 T 13-09-2016 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 Gene3D G3DSA:1.10.287.80 235 281 4.4E-31 T 13-09-2016 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 SUPERFAMILY SSF52943 2 286 9.29E-94 T 13-09-2016 IPR023633 ATPase, F1 complex, gamma subunit domain PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 Pfam PF00231 ATP synthase 5 285 4.2E-92 T 13-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 PANTHER PTHR11693 1 286 2.9E-129 T 13-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 Gene3D G3DSA:1.10.287.80 201 234 6.2E-38 T 13-09-2016 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 Gene3D G3DSA:1.10.287.80 19 60 6.2E-38 T 13-09-2016 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 5.3E-106 T 13-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.343 T 13-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 13-09-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 Gene3D G3DSA:3.40.1380.10 64 191 2.7E-42 T 13-09-2016 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 1.1E-36 T 13-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.1E-36 T 13-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.1E-36 T 13-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30010 b3d2e9e9871608338fdaac8afaa9e108 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 1.1E-36 T 13-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS16690 d7e4fac9a4d29fc961f70424f646995f 388 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 388 72.709 T 13-09-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PMA3_RS16690 d7e4fac9a4d29fc961f70424f646995f 388 PANTHER PTHR36510:SF1 7 382 8.5E-112 T 13-09-2016 PMA3_RS16690 d7e4fac9a4d29fc961f70424f646995f 388 SUPERFAMILY SSF55931 4 368 7.75E-88 T 13-09-2016 PMA3_RS16690 d7e4fac9a4d29fc961f70424f646995f 388 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 7 292 9.9E-93 T 13-09-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PMA3_RS16690 d7e4fac9a4d29fc961f70424f646995f 388 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 7 284 5.3E-58 T 13-09-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PMA3_RS16690 d7e4fac9a4d29fc961f70424f646995f 388 PANTHER PTHR36510 7 382 8.5E-112 T 13-09-2016 PMA3_RS05425 095c8b17bdee9b673f737a4f38eae917 263 PANTHER PTHR10992 4 262 5.6E-109 T 13-09-2016 PMA3_RS05425 095c8b17bdee9b673f737a4f38eae917 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.6E-5 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS05425 095c8b17bdee9b673f737a4f38eae917 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 207 221 2.6E-5 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS05425 095c8b17bdee9b673f737a4f38eae917 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.6E-5 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS05425 095c8b17bdee9b673f737a4f38eae917 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.6E-5 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS05425 095c8b17bdee9b673f737a4f38eae917 263 PANTHER PTHR10992:SF861 4 262 5.6E-109 T 13-09-2016 PMA3_RS05425 095c8b17bdee9b673f737a4f38eae917 263 Gene3D G3DSA:3.40.50.1820 3 261 3.0E-58 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS05425 095c8b17bdee9b673f737a4f38eae917 263 SUPERFAMILY SSF53474 3 260 1.61E-59 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS05425 095c8b17bdee9b673f737a4f38eae917 263 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 260 1.7E-104 T 13-09-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 PMA3_RS05425 095c8b17bdee9b673f737a4f38eae917 263 Pfam PF12146 Serine aminopeptidase, S33 46 231 2.5E-14 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 SUPERFAMILY SSF56784 539 783 1.37E-54 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 SUPERFAMILY SSF56784 482 501 1.37E-54 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 201 786 4.6E-179 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 Gene3D G3DSA:3.30.70.100 3 68 6.1E-19 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 SUPERFAMILY SSF81665 384 477 1.83E-14 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 SUPERFAMILY SSF81665 253 283 1.83E-14 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 SUPERFAMILY SSF81665 732 756 1.83E-14 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 Gene3D G3DSA:2.70.150.10 245 384 1.3E-24 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 SUPERFAMILY SSF81653 286 383 1.01E-22 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 256 762 1.7E-84 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 Gene3D G3DSA:3.40.50.1000 612 751 2.8E-51 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 Gene3D G3DSA:3.40.50.1000 454 499 2.8E-51 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 Pfam PF00122 E1-E2 ATPase 254 474 1.1E-63 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PANTHER PTHR24093:SF332 8 790 0.0 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 Pfam PF00702 haloacid dehalogenase-like hydrolase 480 697 6.4E-39 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 74 134 8.0E-9 T 13-09-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 8 68 1.5E-8 T 13-09-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00943 Copper-transporting ATPase signature 87 101 3.7E-12 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00943 Copper-transporting ATPase signature 406 420 3.7E-12 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00943 Copper-transporting ATPase signature 253 272 3.7E-12 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00943 Copper-transporting ATPase signature 204 223 3.7E-12 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00943 Copper-transporting ATPase signature 661 678 3.7E-12 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00943 Copper-transporting ATPase signature 466 481 3.7E-12 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00943 Copper-transporting ATPase signature 273 291 3.7E-12 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 13-09-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 718 1.0E-21 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 683 702 1.0E-21 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 333 347 1.0E-21 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 483 497 1.0E-21 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 641 1.0E-21 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 Pfam PF00403 Heavy-metal-associated domain 75 133 4.4E-15 T 13-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 Pfam PF00403 Heavy-metal-associated domain 10 66 1.2E-11 T 13-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 SUPERFAMILY SSF55008 71 143 3.67E-21 T 13-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 Gene3D G3DSA:3.40.1110.10 504 611 1.4E-14 T 13-09-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 PANTHER PTHR24093 8 790 0.0 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 485 491 - T 13-09-2016 IPR018303 P-type ATPase, phosphorylation site PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 SUPERFAMILY SSF55008 2 68 3.27E-15 T 13-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 Gene3D G3DSA:3.30.70.100 71 154 8.8E-26 T 13-09-2016 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 ProSitePatterns PS01047 Heavy-metal-associated domain. 11 40 - T 13-09-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PMA3_RS26525 2b5e83557e0d6e07630ca0a1e0c22aa5 797 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 219 785 1.3E-186 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS06740 274928151eba313d308bb78de4ca2513 160 Gene3D G3DSA:3.40.630.30 1 157 4.3E-60 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS06740 274928151eba313d308bb78de4ca2513 160 PANTHER PTHR10545 1 160 4.5E-61 T 13-09-2016 PMA3_RS06740 274928151eba313d308bb78de4ca2513 160 Pfam PF00583 Acetyltransferase (GNAT) family 58 137 1.8E-13 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS06740 274928151eba313d308bb78de4ca2513 160 SUPERFAMILY SSF55729 3 150 6.0E-38 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 SUPERFAMILY SSF82866 792 1017 2.22E-42 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 SUPERFAMILY SSF82714 183 267 1.96E-17 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 Pfam PF00873 AcrB/AcrD/AcrF family 6 1012 0.0 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 SUPERFAMILY SSF82693 137 182 2.43E-20 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 SUPERFAMILY SSF82693 268 324 2.43E-20 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 Gene3D G3DSA:1.10.3850.10 799 1014 3.0E-50 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PANTHER PTHR32063:SF34 1 1034 0.0 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PANTHER PTHR32063 1 1034 0.0 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 SUPERFAMILY SSF82714 707 791 5.1E-16 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 Gene3D G3DSA:1.20.1640.10 284 499 9.1E-57 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 Gene3D G3DSA:3.30.70.1430 41 142 1.2E-27 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 SUPERFAMILY SSF82866 290 491 2.22E-47 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 SUPERFAMILY SSF82693 556 648 8.72E-15 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 Gene3D G3DSA:3.30.2090.10 707 790 1.6E-14 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 Gene3D G3DSA:3.30.2090.10 183 266 5.9E-19 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 SUPERFAMILY SSF82693 40 130 7.5E-22 T 13-09-2016 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.2E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 6.2E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.2E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.2E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.2E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.2E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.2E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 6.2E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.2E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15015 0403c8985b308ff0bbf8df4fc61e7404 1035 Gene3D G3DSA:3.30.70.1430 559 647 1.4E-10 T 13-09-2016 PMA3_RS08455 bd7ec1c4f99063d09f9b2897b8290f20 368 Gene3D G3DSA:3.10.560.10 155 234 4.9E-15 T 13-09-2016 PMA3_RS08455 bd7ec1c4f99063d09f9b2897b8290f20 368 PANTHER PTHR33619:SF3 42 346 6.3E-44 T 13-09-2016 PMA3_RS08455 bd7ec1c4f99063d09f9b2897b8290f20 368 Gene3D G3DSA:3.10.560.10 235 333 1.6E-25 T 13-09-2016 PMA3_RS08455 bd7ec1c4f99063d09f9b2897b8290f20 368 PANTHER PTHR33619 42 346 6.3E-44 T 13-09-2016 PMA3_RS08455 bd7ec1c4f99063d09f9b2897b8290f20 368 Gene3D G3DSA:3.30.1950.10 80 154 4.0E-27 T 13-09-2016 PMA3_RS08455 bd7ec1c4f99063d09f9b2897b8290f20 368 Pfam PF02563 Polysaccharide biosynthesis/export protein 72 156 3.8E-25 T 13-09-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 PMA3_RS04960 7fff972f9c499225171cdee664db4be8 352 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 182 337 4.4E-16 T 13-09-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS04960 7fff972f9c499225171cdee664db4be8 352 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 20 169 3.1E-39 T 13-09-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS04960 7fff972f9c499225171cdee664db4be8 352 PANTHER PTHR13326 17 340 2.1E-58 T 13-09-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS04960 7fff972f9c499225171cdee664db4be8 352 SUPERFAMILY SSF55120 9 339 2.45E-93 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS04960 7fff972f9c499225171cdee664db4be8 352 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 27.714 T 13-09-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS04960 7fff972f9c499225171cdee664db4be8 352 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 13-09-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS19660 7c665bc589f2a3854f4e803a803269b4 441 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 263 1.6E-110 T 13-09-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PMA3_RS19660 7c665bc589f2a3854f4e803a803269b4 441 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 264 440 1.4E-84 T 13-09-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PMA3_RS19660 7c665bc589f2a3854f4e803a803269b4 441 PIRSF PIRSF001362 1 441 9.0E-228 T 13-09-2016 PMA3_RS19660 7c665bc589f2a3854f4e803a803269b4 441 Gene3D G3DSA:3.20.20.60 6 423 4.6E-168 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS19660 7c665bc589f2a3854f4e803a803269b4 441 ProSitePatterns PS00161 Isocitrate lyase signature. 201 206 - T 13-09-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 PMA3_RS19660 7c665bc589f2a3854f4e803a803269b4 441 PANTHER PTHR21631 3 441 4.1E-173 T 13-09-2016 PMA3_RS19660 7c665bc589f2a3854f4e803a803269b4 441 SUPERFAMILY SSF51621 7 440 6.28E-156 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS19660 7c665bc589f2a3854f4e803a803269b4 441 Pfam PF00463 Isocitrate lyase family 14 263 2.7E-57 T 13-09-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PMA3_RS19660 7c665bc589f2a3854f4e803a803269b4 441 Pfam PF00463 Isocitrate lyase family 264 440 1.1E-48 T 13-09-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 SUPERFAMILY SSF51735 91 257 7.62E-36 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 278 1.1E-16 T 13-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 196 212 - T 13-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 SUPERFAMILY SSF52283 3 101 7.44E-17 T 13-09-2016 PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 Gene3D G3DSA:3.40.50.720 109 258 7.6E-39 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 362 44.631 T 13-09-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 Gene3D G3DSA:3.40.50.720 1 107 3.7E-19 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 PANTHER PTHR10996:SF111 1 330 1.2E-144 T 13-09-2016 PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 Pfam PF11890 Domain of unknown function (DUF3410) 288 376 1.1E-23 T 13-09-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 255 4.2E-35 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS08570 48561b1a971e958fee49c233128cfe20 380 PANTHER PTHR10996 1 330 1.2E-144 T 13-09-2016 PMA3_RS06415 7bdcc689506c2284ca0b2cbf9649d4a0 494 PANTHER PTHR30097 47 413 8.2E-85 T 13-09-2016 PMA3_RS06415 7bdcc689506c2284ca0b2cbf9649d4a0 494 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 113 321 4.1E-69 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS06415 7bdcc689506c2284ca0b2cbf9649d4a0 494 Gene3D G3DSA:2.40.50.100 215 246 1.0E-6 T 13-09-2016 PMA3_RS06415 7bdcc689506c2284ca0b2cbf9649d4a0 494 Gene3D G3DSA:2.40.50.100 131 164 1.0E-6 T 13-09-2016 PMA3_RS06415 7bdcc689506c2284ca0b2cbf9649d4a0 494 Pfam PF11604 Copper binding periplasmic protein CusF 425 488 2.0E-19 T 13-09-2016 IPR021647 Copper binding periplasmic protein CusF PMA3_RS06415 7bdcc689506c2284ca0b2cbf9649d4a0 494 SUPERFAMILY SSF111369 130 326 4.32E-12 T 13-09-2016 PMA3_RS06415 7bdcc689506c2284ca0b2cbf9649d4a0 494 PANTHER PTHR30097:SF3 47 413 8.2E-85 T 13-09-2016 PMA3_RS06415 7bdcc689506c2284ca0b2cbf9649d4a0 494 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 215 397 8.4E-38 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 Gene3D G3DSA:1.10.10.10 14 82 1.1E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 SUPERFAMILY SSF46785 15 85 9.93E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 SMART SM00895 91 215 3.7E-20 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 Pfam PF07729 FCD domain 91 214 3.3E-23 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 81 1.8E-16 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 SMART SM00345 23 81 5.5E-15 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 9.9E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 9.9E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 PANTHER PTHR11751 17 107 2.2E-24 T 13-09-2016 PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 Gene3D G3DSA:1.20.120.530 84 228 2.3E-25 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS11245 a514ca71c0ce0b5f43548c034822410a 250 SUPERFAMILY SSF48008 88 223 1.44E-22 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS27405 70f0cf741047379d52b6f9b6d2db9cbf 363 SUPERFAMILY SSF53067 63 108 1.26E-27 T 13-09-2016 PMA3_RS27405 70f0cf741047379d52b6f9b6d2db9cbf 363 SUPERFAMILY SSF53067 138 336 1.26E-27 T 13-09-2016 PMA3_RS27405 70f0cf741047379d52b6f9b6d2db9cbf 363 SUPERFAMILY SSF53067 3 36 1.26E-27 T 13-09-2016 PMA3_RS27405 70f0cf741047379d52b6f9b6d2db9cbf 363 Pfam PF03702 Uncharacterised protein family (UPF0075) 3 363 1.6E-159 T 13-09-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 PMA3_RS27405 70f0cf741047379d52b6f9b6d2db9cbf 363 PANTHER PTHR30605:SF0 1 362 2.0E-160 T 13-09-2016 PMA3_RS27405 70f0cf741047379d52b6f9b6d2db9cbf 363 PANTHER PTHR30605 1 362 2.0E-160 T 13-09-2016 PMA3_RS27405 70f0cf741047379d52b6f9b6d2db9cbf 363 Gene3D G3DSA:3.30.420.40 140 323 9.5E-72 T 13-09-2016 PMA3_RS27405 70f0cf741047379d52b6f9b6d2db9cbf 363 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 363 41.088 T 13-09-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 Gene3D G3DSA:1.10.10.60 4 40 8.6E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 4.0E-17 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 Gene3D G3DSA:1.10.357.10 64 200 6.3E-55 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 PANTHER PTHR30055 1 163 5.4E-62 T 13-09-2016 PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 SUPERFAMILY SSF48498 78 200 3.19E-41 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 SUPERFAMILY SSF46689 3 76 4.41E-19 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 PANTHER PTHR30055:SF53 1 163 5.4E-62 T 13-09-2016 PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 Pfam PF08362 YcdC-like protein, C-terminal region 59 200 5.6E-61 T 13-09-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 Gene3D G3DSA:1.10.10.60 41 63 1.5E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.0E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS21335 933853cbf273c7823719f3e06ddc1de5 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.0E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 PANTHER PTHR11938 1 31 1.3E-129 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 Gene3D G3DSA:3.30.70.20 236 358 1.2E-75 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 Gene3D G3DSA:3.30.70.20 436 465 1.2E-75 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 Gene3D G3DSA:3.30.70.20 132 133 2.2E-11 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 Gene3D G3DSA:3.30.70.20 10 26 2.2E-11 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 Gene3D G3DSA:3.30.70.20 174 195 2.2E-11 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 PANTHER PTHR11938 170 336 1.3E-129 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 PANTHER PTHR11938 134 143 1.3E-129 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 SUPERFAMILY SSF54862 1 492 2.62E-179 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 PANTHER PTHR11938:SF8 1 31 1.3E-129 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 PANTHER PTHR11938:SF8 134 143 1.3E-129 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 Gene3D G3DSA:1.10.3650.10 359 434 3.2E-31 T 13-09-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 Pfam PF13247 4Fe-4S dicluster domain 175 271 6.6E-38 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 1.6E-30 T 13-09-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 PANTHER PTHR11938:SF8 170 336 1.3E-129 T 13-09-2016 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 0.0 T 13-09-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 PMA3_RS16185 9884be8fc20decd61c2d6c08083d2c07 512 Gene3D G3DSA:3.30.70.20 196 235 3.3E-25 T 13-09-2016 PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 391 534 1.7E-31 T 13-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 Gene3D G3DSA:3.40.50.970 372 535 1.2E-41 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 PANTHER PTHR18968 3 538 4.8E-138 T 13-09-2016 PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 324 9.2E-28 T 13-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 PANTHER PTHR18968:SF13 3 538 4.8E-138 T 13-09-2016 PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 SUPERFAMILY SSF52518 363 537 4.29E-41 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 SUPERFAMILY SSF52467 156 346 5.97E-39 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 Gene3D G3DSA:3.40.50.1220 186 371 6.1E-39 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 Gene3D G3DSA:3.40.50.970 3 172 8.4E-56 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 SUPERFAMILY SSF52518 2 175 7.86E-50 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS23535 929a3ea4bc8f7ce3f58386550109d306 545 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 171 2.6E-51 T 13-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PMA3_RS12235 e3e7214ae344f4f51d0dc244138ef7f5 72 Pfam PF11174 Protein of unknown function (DUF2970) 12 67 2.3E-25 T 13-09-2016 IPR021344 Protein of unknown function DUF2970 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 PANTHER PTHR24423 1 62 3.2E-131 T 13-09-2016 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 Pfam PF08448 PAS fold 265 371 2.1E-11 T 13-09-2016 IPR013656 PAS fold-4 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 Pfam PF00512 His Kinase A (phospho-acceptor) domain 377 444 2.5E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 PANTHER PTHR24423:SF564 257 594 3.2E-131 T 13-09-2016 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 PANTHER PTHR24423:SF564 1 62 3.2E-131 T 13-09-2016 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 SMART SM00304 196 248 2.9E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 SUPERFAMILY SSF55874 433 594 1.57E-45 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 SMART SM00091 259 324 8.5E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 SUPERFAMILY SSF158472 196 245 1.44E-7 T 13-09-2016 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 Pfam PF00672 HAMP domain 177 245 1.0E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 SUPERFAMILY SSF55785 252 368 1.2E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 258 374 1.2E-10 T 13-09-2016 IPR000014 PAS domain PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 Gene3D G3DSA:3.30.565.10 430 594 3.3E-44 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 Gene3D G3DSA:1.10.287.130 368 429 2.9E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 Pfam PF16767 Sensor domain of alginate biosynthesis sensor protein KinB 39 158 1.4E-37 T 13-09-2016 IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 593 4.7E-24 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 SMART SM00388 376 444 7.7E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 595 2.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 576 2.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 2.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 2.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 SMART SM00387 490 596 1.5E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 SUPERFAMILY SSF47384 361 444 3.53E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 PANTHER PTHR24423 257 594 3.2E-131 T 13-09-2016 PMA3_RS30320 a48abf060634a65de2ca1efa57e43b9a 596 Gene3D G3DSA:3.30.450.20 256 367 2.5E-16 T 13-09-2016 PMA3_RS29510 56070e922b03657f41c9278ebe82c940 151 SUPERFAMILY SSF51283 2 149 1.02E-51 T 13-09-2016 IPR029054 dUTPase-like PMA3_RS29510 56070e922b03657f41c9278ebe82c940 151 PANTHER PTHR11241 1 149 1.7E-50 T 13-09-2016 PMA3_RS29510 56070e922b03657f41c9278ebe82c940 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 32.591 T 13-09-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 PMA3_RS29510 56070e922b03657f41c9278ebe82c940 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 150 1.4E-47 T 13-09-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 PMA3_RS29510 56070e922b03657f41c9278ebe82c940 151 Gene3D G3DSA:2.70.40.10 7 149 3.7E-51 T 13-09-2016 IPR029054 dUTPase-like PMA3_RS29510 56070e922b03657f41c9278ebe82c940 151 Pfam PF00692 dUTPase 16 149 1.8E-39 T 13-09-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 PMA3_RS02650 f8688af659c932fb26ab4e0d9a5d1c79 284 SUPERFAMILY SSF54637 176 259 5.59E-19 T 13-09-2016 IPR029069 HotDog domain PMA3_RS02650 f8688af659c932fb26ab4e0d9a5d1c79 284 PRINTS PR01483 Fatty acid synthase signature 181 203 3.5E-6 T 13-09-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PMA3_RS02650 f8688af659c932fb26ab4e0d9a5d1c79 284 PRINTS PR01483 Fatty acid synthase signature 203 224 3.5E-6 T 13-09-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PMA3_RS02650 f8688af659c932fb26ab4e0d9a5d1c79 284 Gene3D G3DSA:3.10.129.10 176 258 6.2E-22 T 13-09-2016 IPR029069 HotDog domain PMA3_RS02650 f8688af659c932fb26ab4e0d9a5d1c79 284 PANTHER PTHR13078:SF54 1 280 1.2E-106 T 13-09-2016 PMA3_RS02650 f8688af659c932fb26ab4e0d9a5d1c79 284 Gene3D G3DSA:3.10.129.10 63 155 2.0E-7 T 13-09-2016 IPR029069 HotDog domain PMA3_RS02650 f8688af659c932fb26ab4e0d9a5d1c79 284 Pfam PF01575 MaoC like domain 180 260 2.5E-15 T 13-09-2016 IPR002539 MaoC-like domain PMA3_RS02650 f8688af659c932fb26ab4e0d9a5d1c79 284 SUPERFAMILY SSF54637 42 154 2.09E-7 T 13-09-2016 IPR029069 HotDog domain PMA3_RS02650 f8688af659c932fb26ab4e0d9a5d1c79 284 PANTHER PTHR13078 1 280 1.2E-106 T 13-09-2016 PMA3_RS02580 836b5436498979e4f147fda654f23e9a 648 PANTHER PTHR32089 291 648 3.2E-91 T 13-09-2016 PMA3_RS02580 836b5436498979e4f147fda654f23e9a 648 SMART SM00283 386 647 1.9E-50 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS02580 836b5436498979e4f147fda654f23e9a 648 PANTHER PTHR32089:SF64 291 648 3.2E-91 T 13-09-2016 PMA3_RS02580 836b5436498979e4f147fda654f23e9a 648 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 646 2.2E-41 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS02580 836b5436498979e4f147fda654f23e9a 648 Gene3D G3DSA:1.10.287.950 401 613 5.4E-50 T 13-09-2016 PMA3_RS02580 836b5436498979e4f147fda654f23e9a 648 SUPERFAMILY SSF58104 338 648 1.44E-64 T 13-09-2016 PMA3_RS29100 321b9462996e63ca5b104d7322933dab 488 PANTHER PTHR30108 1 488 4.9E-267 T 13-09-2016 PMA3_RS29100 321b9462996e63ca5b104d7322933dab 488 Gene3D G3DSA:3.40.1670.10 337 453 1.1E-54 T 13-09-2016 PMA3_RS29100 321b9462996e63ca5b104d7322933dab 488 SUPERFAMILY SSF143968 323 487 3.79E-66 T 13-09-2016 PMA3_RS29100 321b9462996e63ca5b104d7322933dab 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 2.1E-170 T 13-09-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 PMA3_RS29100 321b9462996e63ca5b104d7322933dab 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 8.1E-173 T 13-09-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 PMA3_RS29100 321b9462996e63ca5b104d7322933dab 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 71.862 T 13-09-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 PMA3_RS29100 321b9462996e63ca5b104d7322933dab 488 Gene3D G3DSA:1.20.5.570 455 487 1.2E-17 T 13-09-2016 PMA3_RS29100 321b9462996e63ca5b104d7322933dab 488 SUPERFAMILY SSF50475 3 322 2.0E-125 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS29100 321b9462996e63ca5b104d7322933dab 488 PANTHER PTHR30108:SF1 1 488 4.9E-267 T 13-09-2016 PMA3_RS21230 7aba933e0f8246feb75a96ba91f0a821 245 PANTHER PTHR31881 3 235 7.1E-121 T 13-09-2016 PMA3_RS21230 7aba933e0f8246feb75a96ba91f0a821 245 PANTHER PTHR31881:SF3 3 235 7.1E-121 T 13-09-2016 PMA3_RS21230 7aba933e0f8246feb75a96ba91f0a821 245 Pfam PF04654 Protein of unknown function, DUF599 13 223 4.9E-61 T 13-09-2016 IPR006747 Protein of unknown function DUF599 PMA3_RS01395 35c438230d6b0ae23fbc652329b323a5 91 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 5 90 2.0E-32 T 13-09-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein PMA3_RS01395 35c438230d6b0ae23fbc652329b323a5 91 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 91 1.6E-44 T 13-09-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein PMA3_RS08200 a60c21d4ba78f39f93b5db15620e528e 369 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 5 362 2.7E-170 T 13-09-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PMA3_RS08200 a60c21d4ba78f39f93b5db15620e528e 369 Gene3D G3DSA:3.90.1150.10 252 359 1.2E-41 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS08200 a60c21d4ba78f39f93b5db15620e528e 369 Pfam PF00266 Aminotransferase class-V 35 303 6.4E-22 T 13-09-2016 IPR000192 Aminotransferase class V domain PMA3_RS08200 a60c21d4ba78f39f93b5db15620e528e 369 PIRSF PIRSF000524 1 368 4.6E-61 T 13-09-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PMA3_RS08200 a60c21d4ba78f39f93b5db15620e528e 369 Gene3D G3DSA:3.40.640.10 31 251 1.0E-46 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS08200 a60c21d4ba78f39f93b5db15620e528e 369 SUPERFAMILY SSF53383 7 364 3.67E-84 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS08200 a60c21d4ba78f39f93b5db15620e528e 369 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 369 210.336 T 13-09-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PMA3_RS08200 a60c21d4ba78f39f93b5db15620e528e 369 PANTHER PTHR21152:SF21 1 366 2.2E-118 T 13-09-2016 PMA3_RS08200 a60c21d4ba78f39f93b5db15620e528e 369 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 7 360 1.3E-156 T 13-09-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PMA3_RS08200 a60c21d4ba78f39f93b5db15620e528e 369 PANTHER PTHR21152 1 366 2.2E-118 T 13-09-2016 PMA3_RS21830 634d2de1455f87e5f1deec3687bbeb3d 118 SUPERFAMILY SSF55248 16 111 5.36E-33 T 13-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PMA3_RS21830 634d2de1455f87e5f1deec3687bbeb3d 118 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 110 1.0E-28 T 13-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PMA3_RS21830 634d2de1455f87e5f1deec3687bbeb3d 118 Gene3D G3DSA:3.30.1360.20 12 112 7.7E-32 T 13-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PMA3_RS21830 634d2de1455f87e5f1deec3687bbeb3d 118 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 111 22.097 T 13-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PMA3_RS21830 634d2de1455f87e5f1deec3687bbeb3d 118 PANTHER PTHR12599 4 113 3.8E-34 T 13-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 PANTHER PTHR11731 158 430 6.1E-103 T 13-09-2016 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 19 429 2.5E-157 T 13-09-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 Hamap MF_00671 Protein TolB [tolB]. 5 428 34.906 T 13-09-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 SUPERFAMILY SSF52964 29 159 7.19E-37 T 13-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 Pfam PF07676 WD40-like Beta Propeller Repeat 202 228 1.0E-5 T 13-09-2016 IPR011659 WD40-like Beta Propeller PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 Pfam PF07676 WD40-like Beta Propeller Repeat 377 400 0.19 T 13-09-2016 IPR011659 WD40-like Beta Propeller PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 3.4E-13 T 13-09-2016 IPR011659 WD40-like Beta Propeller PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 8.3E-15 T 13-09-2016 IPR011659 WD40-like Beta Propeller PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 Gene3D G3DSA:2.130.10.10 151 430 1.3E-75 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 SUPERFAMILY SSF69304 153 430 4.71E-55 T 13-09-2016 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 PANTHER PTHR11731:SF123 8 121 6.1E-103 T 13-09-2016 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 PANTHER PTHR11731:SF123 158 430 6.1E-103 T 13-09-2016 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 Gene3D G3DSA:3.40.50.10070 25 150 9.5E-44 T 13-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 PANTHER PTHR11731 8 121 6.1E-103 T 13-09-2016 PMA3_RS23235 9f1295dd16178c1f8d38e9a55ac7e88e 433 Pfam PF04052 TolB amino-terminal domain 25 127 4.7E-29 T 13-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 PRINTS PR00142 RecA protein signature 127 156 3.5E-84 T 13-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 PRINTS PR00142 RecA protein signature 210 238 3.5E-84 T 13-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 PRINTS PR00142 RecA protein signature 297 314 3.5E-84 T 13-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 PRINTS PR00142 RecA protein signature 243 272 3.5E-84 T 13-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 PRINTS PR00142 RecA protein signature 93 122 3.5E-84 T 13-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 PRINTS PR00142 RecA protein signature 165 194 3.5E-84 T 13-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 PANTHER PTHR22942:SF1 3 335 5.3E-202 T 13-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 Gene3D G3DSA:3.40.50.300 27 267 5.7E-84 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.8E-143 T 13-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 PANTHER PTHR22942 3 335 5.3E-202 T 13-09-2016 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 Hamap MF_00268 Protein RecA [recA]. 5 329 50.259 T 13-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 SMART SM00382 57 228 1.3E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 ProSitePatterns PS00321 recA signature. 213 221 - T 13-09-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 SUPERFAMILY SSF54752 270 325 1.83E-18 T 13-09-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 SUPERFAMILY SSF52540 3 267 1.39E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 Gene3D G3DSA:3.30.250.10 271 326 7.4E-25 T 13-09-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal PMA3_RS05000 a44e17db66bc12277670bde0f44842e0 350 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 7.1E-167 T 13-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 PANTHER PTHR11958:SF26 1 426 1.1E-246 T 13-09-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 SUPERFAMILY SSF118215 8 411 3.14E-124 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 PANTHER PTHR11958 1 426 1.1E-246 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 7.6E-53 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 PRINTS PR00173 Glutamate-aspartate symporter signature 202 221 7.6E-53 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 7.6E-53 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 7.6E-53 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 7.6E-53 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 7.6E-53 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 PRINTS PR00173 Glutamate-aspartate symporter signature 154 176 7.6E-53 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 PRINTS PR00173 Glutamate-aspartate symporter signature 364 384 7.6E-53 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 Gene3D G3DSA:1.10.3860.10 2 415 5.1E-132 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 Pfam PF00375 Sodium:dicarboxylate symporter family 8 410 5.2E-121 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS30295 4ce8fca6611008def178c70b1fc58cb0 443 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 305 328 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS04345 39f6e298eb3e201f3c1db7f3cae3a6c5 142 Gene3D G3DSA:3.40.50.10110 1 139 1.8E-44 T 13-09-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PMA3_RS04345 39f6e298eb3e201f3c1db7f3cae3a6c5 142 PANTHER PTHR38767 2 142 4.8E-46 T 13-09-2016 PMA3_RS04345 39f6e298eb3e201f3c1db7f3cae3a6c5 142 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 2.0E-37 T 13-09-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PMA3_RS04345 39f6e298eb3e201f3c1db7f3cae3a6c5 142 SUPERFAMILY SSF102400 1 139 1.31E-41 T 13-09-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 Pfam PF04545 Sigma-70, region 4 549 602 1.3E-18 T 13-09-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 574 600 - T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 PRINTS PR00046 Major sigma-70 factor signature 574 589 6.4E-31 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 PRINTS PR00046 Major sigma-70 factor signature 429 437 6.4E-31 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 PRINTS PR00046 Major sigma-70 factor signature 589 600 6.4E-31 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 PRINTS PR00046 Major sigma-70 factor signature 405 418 6.4E-31 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 PRINTS PR00046 Major sigma-70 factor signature 553 565 6.4E-31 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 SUPERFAMILY SSF88946 115 448 2.35E-103 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 PANTHER PTHR30603:SF0 7 152 2.7E-255 T 13-09-2016 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 SUPERFAMILY SSF88659 511 613 7.66E-27 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 PANTHER PTHR30603:SF0 328 614 2.7E-255 T 13-09-2016 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 Gene3D G3DSA:1.10.10.10 454 505 1.9E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 PANTHER PTHR30603 7 152 2.7E-255 T 13-09-2016 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 PANTHER PTHR30603 328 614 2.7E-255 T 13-09-2016 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 Pfam PF04542 Sigma-70 region 2 381 450 1.7E-21 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 Gene3D G3DSA:1.10.601.10 112 450 6.0E-137 T 13-09-2016 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 Pfam PF03979 Sigma-70 factor, region 1.1 6 83 1.0E-29 T 13-09-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 Gene3D G3DSA:1.10.10.10 544 614 2.0E-32 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 Pfam PF04546 Sigma-70, non-essential region 139 350 1.9E-60 T 13-09-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 377 602 8.8E-37 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 377 613 1.2E-121 T 13-09-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 Pfam PF04539 Sigma-70 region 3 460 535 1.5E-29 T 13-09-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 SUPERFAMILY SSF88659 454 527 1.18E-20 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 614 46.296 T 13-09-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 405 418 - T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS27635 40278a5051b7ad03106951e29c9ed4f7 615 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 3.8E-13 T 13-09-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 PANTHER PTHR11751 9 68 3.6E-18 T 13-09-2016 PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 Pfam PF07702 UTRA domain 105 232 7.1E-13 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 Gene3D G3DSA:1.10.10.10 2 71 2.0E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 SMART SM00866 89 233 1.1E-7 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 Gene3D G3DSA:3.40.1410.10 97 237 1.7E-24 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.2E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.2E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 1.8E-18 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 SUPERFAMILY SSF64288 56 240 7.85E-24 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 SMART SM00345 9 68 1.4E-18 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS10130 de491719246e73afb15984cc2b10ada1 246 SUPERFAMILY SSF46785 3 72 3.23E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00090 c81e14457a4605de89cc0cdd21640599 67 Pfam PF11137 Protein of unknown function (DUF2909) 2 61 9.6E-18 T 13-09-2016 IPR021313 Protein of unknown function DUF2909 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 SUPERFAMILY SSF56935 142 810 3.89E-119 T 13-09-2016 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 Gene3D G3DSA:2.170.130.10 125 254 4.5E-30 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 PANTHER PTHR32552:SF37 2 38 1.4E-171 T 13-09-2016 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 247 4.2E-14 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 PANTHER PTHR32552:SF37 564 811 1.4E-171 T 13-09-2016 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 PANTHER PTHR32552:SF37 137 540 1.4E-171 T 13-09-2016 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 SMART SM00965 51 102 2.6E-9 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 Pfam PF00593 TonB dependent receptor 571 810 5.0E-33 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 Gene3D G3DSA:2.40.170.20 263 810 2.0E-130 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 147 809 4.1E-100 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 PANTHER PTHR32552 564 811 1.4E-171 T 13-09-2016 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 PANTHER PTHR32552 137 540 1.4E-171 T 13-09-2016 PMA3_RS16715 6695f1058a5d255324ff87a2f1216852 813 PANTHER PTHR32552 2 38 1.4E-171 T 13-09-2016 PMA3_RS00190 d8d33467050504e281636458f00766ee 333 Gene3D G3DSA:3.20.20.30 2 329 8.3E-95 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS00190 d8d33467050504e281636458f00766ee 333 PANTHER PTHR30137 1 331 4.8E-142 T 13-09-2016 PMA3_RS00190 d8d33467050504e281636458f00766ee 333 SUPERFAMILY SSF51679 7 329 2.03E-90 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS00190 d8d33467050504e281636458f00766ee 333 Pfam PF00296 Luciferase-like monooxygenase 20 302 1.0E-43 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS00190 d8d33467050504e281636458f00766ee 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 3.0E-133 T 13-09-2016 IPR019949 Luciferase family oxidoreductase, group 1 PMA3_RS00190 d8d33467050504e281636458f00766ee 333 PANTHER PTHR30137:SF2 1 331 4.8E-142 T 13-09-2016 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 238 253 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 Gene3D G3DSA:3.30.450.20 26 129 3.7E-10 T 13-09-2016 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 365 374 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 Pfam PF00989 PAS fold 27 129 6.7E-7 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 SUPERFAMILY SSF52540 150 389 6.23E-71 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 SUPERFAMILY SSF46689 365 459 3.99E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 Gene3D G3DSA:1.10.10.60 378 459 4.1E-18 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 SMART SM00382 171 316 2.5E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 Gene3D G3DSA:3.40.50.300 147 324 2.9E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 Gene3D G3DSA:1.10.8.60 325 377 1.4E-20 T 13-09-2016 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 441 461 4.7E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 441 4.7E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 175 188 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 SUPERFAMILY SSF55785 23 126 2.09E-10 T 13-09-2016 IPR000014 PAS domain PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 Pfam PF02954 Bacterial regulatory protein, Fis family 417 458 8.5E-14 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 PANTHER PTHR32071 89 459 1.3E-143 T 13-09-2016 PMA3_RS14460 b127aa94d1ebbcfa4087914dc5cc8e91 461 Pfam PF00158 Sigma-54 interaction domain 151 318 1.1E-67 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.096 T 13-09-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 Gene3D G3DSA:2.30.38.10 439 515 2.3E-6 T 13-09-2016 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 Gene3D G3DSA:3.40.50.980 79 266 1.8E-40 T 13-09-2016 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 13-09-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 5.4E-24 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 Pfam PF00501 AMP-binding enzyme 83 522 6.6E-87 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 PANTHER PTHR24095:SF178 20 643 0.0 T 13-09-2016 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 SUPERFAMILY SSF56801 12 642 9.94E-180 T 13-09-2016 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 PANTHER PTHR24095 20 643 0.0 T 13-09-2016 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 Gene3D G3DSA:3.30.300.30 517 621 1.4E-25 T 13-09-2016 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 Gene3D G3DSA:3.40.50.980 267 427 2.5E-28 T 13-09-2016 PMA3_RS05590 e6ded4f39545ed44ec612f1bd785455a 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.5E-23 T 13-09-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PMA3_RS20140 bfe3f19b921bae0ffa03188f7af3c354 449 SUPERFAMILY SSF51556 44 304 2.21E-77 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS20140 bfe3f19b921bae0ffa03188f7af3c354 449 SUPERFAMILY SSF51556 361 441 2.21E-77 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS20140 bfe3f19b921bae0ffa03188f7af3c354 449 Gene3D G3DSA:1.10.287.650 306 363 2.1E-32 T 13-09-2016 PMA3_RS20140 bfe3f19b921bae0ffa03188f7af3c354 449 PANTHER PTHR10443:SF22 360 441 3.4E-116 T 13-09-2016 PMA3_RS20140 bfe3f19b921bae0ffa03188f7af3c354 449 PANTHER PTHR10443:SF22 44 304 3.4E-116 T 13-09-2016 PMA3_RS20140 bfe3f19b921bae0ffa03188f7af3c354 449 Gene3D G3DSA:3.20.20.140 40 304 2.2E-98 T 13-09-2016 PMA3_RS20140 bfe3f19b921bae0ffa03188f7af3c354 449 Gene3D G3DSA:3.20.20.140 364 442 2.2E-98 T 13-09-2016 PMA3_RS20140 bfe3f19b921bae0ffa03188f7af3c354 449 PANTHER PTHR10443 360 441 3.4E-116 T 13-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PMA3_RS20140 bfe3f19b921bae0ffa03188f7af3c354 449 PANTHER PTHR10443 44 304 3.4E-116 T 13-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PMA3_RS20140 bfe3f19b921bae0ffa03188f7af3c354 449 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 50 438 6.4E-107 T 13-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PMA3_RS06150 54844775a2f8c6cd2252661612ed8ef4 740 Pfam PF13567 Domain of unknown function (DUF4131) 9 165 1.2E-27 T 13-09-2016 IPR025405 Domain of unknown function DUF4131 PMA3_RS06150 54844775a2f8c6cd2252661612ed8ef4 740 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 110 714 3.5E-103 T 13-09-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 PMA3_RS06150 54844775a2f8c6cd2252661612ed8ef4 740 SUPERFAMILY SSF56281 489 718 3.3E-42 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS06150 54844775a2f8c6cd2252661612ed8ef4 740 PANTHER PTHR30619 1 734 8.7E-180 T 13-09-2016 PMA3_RS06150 54844775a2f8c6cd2252661612ed8ef4 740 Pfam PF00753 Metallo-beta-lactamase superfamily 498 681 1.9E-16 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS06150 54844775a2f8c6cd2252661612ed8ef4 740 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 219 397 3.6E-25 T 13-09-2016 IPR004477 ComEC/Rec2-related protein PMA3_RS06150 54844775a2f8c6cd2252661612ed8ef4 740 SMART SM00849 501 685 5.1E-12 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS06150 54844775a2f8c6cd2252661612ed8ef4 740 PANTHER PTHR30619:SF2 1 734 8.7E-180 T 13-09-2016 PMA3_RS06150 54844775a2f8c6cd2252661612ed8ef4 740 Gene3D G3DSA:3.60.15.10 493 702 2.7E-29 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS06150 54844775a2f8c6cd2252661612ed8ef4 740 Pfam PF03772 Competence protein 198 464 7.5E-57 T 13-09-2016 IPR004477 ComEC/Rec2-related protein PMA3_RS19675 70985d35476bbfa4a0e6e737db16a8b7 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 182 1.2E-67 T 13-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 PMA3_RS19675 70985d35476bbfa4a0e6e737db16a8b7 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 13-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 PMA3_RS19675 70985d35476bbfa4a0e6e737db16a8b7 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 42.579 T 13-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 PMA3_RS19675 70985d35476bbfa4a0e6e737db16a8b7 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 87 174 2.0E-21 T 13-09-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 PMA3_RS19675 70985d35476bbfa4a0e6e737db16a8b7 224 PANTHER PTHR11995:SF14 2 220 1.0E-133 T 13-09-2016 PMA3_RS19675 70985d35476bbfa4a0e6e737db16a8b7 224 PANTHER PTHR11995 2 220 1.0E-133 T 13-09-2016 PMA3_RS19675 70985d35476bbfa4a0e6e737db16a8b7 224 Gene3D G3DSA:3.40.50.700 51 178 2.7E-30 T 13-09-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 PMA3_RS19675 70985d35476bbfa4a0e6e737db16a8b7 224 SUPERFAMILY SSF56770 43 189 1.57E-63 T 13-09-2016 PMA3_RS27360 69ff84b1d11ce5c74a60c313fee887b8 249 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 244 1.5E-26 T 13-09-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PMA3_RS27360 69ff84b1d11ce5c74a60c313fee887b8 249 SUPERFAMILY SSF53067 1 113 2.76E-24 T 13-09-2016 PMA3_RS27360 69ff84b1d11ce5c74a60c313fee887b8 249 SUPERFAMILY SSF53067 117 246 5.61E-31 T 13-09-2016 PMA3_RS27360 69ff84b1d11ce5c74a60c313fee887b8 249 PANTHER PTHR34265 1 249 1.0E-41 T 13-09-2016 PMA3_RS27360 69ff84b1d11ce5c74a60c313fee887b8 249 Gene3D G3DSA:3.30.420.40 88 245 8.3E-40 T 13-09-2016 PMA3_RS27360 69ff84b1d11ce5c74a60c313fee887b8 249 Pfam PF03309 Type III pantothenate kinase 2 198 4.2E-41 T 13-09-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PMA3_RS27360 69ff84b1d11ce5c74a60c313fee887b8 249 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 249 19.322 T 13-09-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 Pfam PF17200 Single Cache domain 2 47 191 2.8E-41 T 13-09-2016 IPR033480 Single Cache domain 2 PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 PANTHER PTHR24421 106 449 3.2E-54 T 13-09-2016 PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 Gene3D G3DSA:3.30.565.10 337 451 3.8E-9 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 SMART SM00387 356 450 2.9E-8 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 439 3.1E-7 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 PIRSF PIRSF037314 1 454 1.1E-175 T 13-09-2016 IPR017171 Signal transduction histidine kinase, MctS PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 Gene3D G3DSA:3.30.450.20 35 184 1.7E-50 T 13-09-2016 PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 SMART SM01049 42 132 4.4E-33 T 13-09-2016 IPR033480 Single Cache domain 2 PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 PANTHER PTHR24421:SF1 106 449 3.2E-54 T 13-09-2016 PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 Pfam PF07730 Histidine kinase 249 317 9.6E-18 T 13-09-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PMA3_RS11435 8f8d912d892ae9c97f959337819e29ef 455 SUPERFAMILY SSF55874 329 440 1.15E-15 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 Gene3D G3DSA:1.10.10.60 225 272 8.5E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 Gene3D G3DSA:2.60.120.280 17 155 1.3E-20 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 Pfam PF02311 AraC-like ligand binding domain 16 148 1.1E-27 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 SUPERFAMILY SSF51215 14 157 6.41E-27 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 PANTHER PTHR11019:SF108 16 278 3.8E-101 T 13-09-2016 PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 SUPERFAMILY SSF46689 175 222 3.4E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 Pfam PF12833 Helix-turn-helix domain 194 272 3.6E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 PANTHER PTHR11019 16 278 3.8E-101 T 13-09-2016 PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 SMART SM00342 188 270 6.9E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 SUPERFAMILY SSF46689 224 274 2.06E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15825 ca23db273a46034f472ec30d1c5b47a1 289 Gene3D G3DSA:1.10.10.60 174 224 3.2E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28345 fc55e9d0146fa755109bbd5c3ecea436 206 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 7 195 3.2E-55 T 13-09-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 PMA3_RS28345 fc55e9d0146fa755109bbd5c3ecea436 206 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 7 197 7.9E-54 T 13-09-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 PMA3_RS28345 fc55e9d0146fa755109bbd5c3ecea436 206 Hamap MF_00650 Phosphoribosyl-dephospho-CoA transferase [mdcG]. 4 203 32.092 T 13-09-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 PMA3_RS11900 9bd2b472dafcaa0ff736dff0bb4128fe 151 SUPERFAMILY SSF54427 3 139 7.83E-27 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS11900 9bd2b472dafcaa0ff736dff0bb4128fe 151 Pfam PF13577 SnoaL-like domain 4 126 1.2E-22 T 13-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain PMA3_RS11900 9bd2b472dafcaa0ff736dff0bb4128fe 151 Gene3D G3DSA:3.10.450.50 4 132 1.1E-19 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS25840 0e9cdb1cc9f1a84808462df68554c813 196 Pfam PF02525 Flavodoxin-like fold 2 188 2.5E-33 T 13-09-2016 IPR003680 Flavodoxin-like fold PMA3_RS25840 0e9cdb1cc9f1a84808462df68554c813 196 Gene3D G3DSA:3.40.50.360 1 192 4.1E-42 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS25840 0e9cdb1cc9f1a84808462df68554c813 196 SUPERFAMILY SSF52218 1 193 1.35E-40 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS25840 0e9cdb1cc9f1a84808462df68554c813 196 PANTHER PTHR10204 1 192 1.2E-119 T 13-09-2016 PMA3_RS25840 0e9cdb1cc9f1a84808462df68554c813 196 PANTHER PTHR10204:SF36 1 192 1.2E-119 T 13-09-2016 PMA3_RS13075 364470c666697f1731b3a30d834aeba2 317 PANTHER PTHR10996:SF127 1 314 6.4E-120 T 13-09-2016 PMA3_RS13075 364470c666697f1731b3a30d834aeba2 317 Gene3D G3DSA:3.40.50.720 115 287 9.5E-65 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13075 364470c666697f1731b3a30d834aeba2 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 286 1.2E-59 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS13075 364470c666697f1731b3a30d834aeba2 317 PANTHER PTHR10996 1 314 6.4E-120 T 13-09-2016 PMA3_RS13075 364470c666697f1731b3a30d834aeba2 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 27 311 6.0E-11 T 13-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PMA3_RS13075 364470c666697f1731b3a30d834aeba2 317 SUPERFAMILY SSF52283 4 127 4.91E-22 T 13-09-2016 PMA3_RS13075 364470c666697f1731b3a30d834aeba2 317 Gene3D G3DSA:3.40.50.720 5 114 5.7E-22 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13075 364470c666697f1731b3a30d834aeba2 317 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 13-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PMA3_RS13075 364470c666697f1731b3a30d834aeba2 317 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 13-09-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PMA3_RS13075 364470c666697f1731b3a30d834aeba2 317 SUPERFAMILY SSF51735 108 287 1.19E-55 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 Gene3D G3DSA:3.30.70.920 58 154 1.7E-28 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 SUPERFAMILY SSF46785 4 64 8.24E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 PANTHER PTHR30154 1 154 9.0E-85 T 13-09-2016 PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 SMART SM00344 5 114 5.8E-40 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 3.5E-14 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 3.5E-14 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 3.5E-14 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 SUPERFAMILY SSF54909 65 154 5.63E-20 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 13-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 Gene3D G3DSA:1.10.10.10 1 55 6.2E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 1.4E-19 T 13-09-2016 PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 PANTHER PTHR30154:SF17 1 154 9.0E-85 T 13-09-2016 PMA3_RS28980 b23cd05f8dcbd126118a61e162f54673 154 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 1.0E-19 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS08330 126293bfafde2d4c94ab87adc7d18496 534 PANTHER PTHR22855:SF35 1 534 0.0 T 13-09-2016 PMA3_RS08330 126293bfafde2d4c94ab87adc7d18496 534 Gene3D G3DSA:3.90.226.10 34 273 5.7E-84 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS08330 126293bfafde2d4c94ab87adc7d18496 534 Gene3D G3DSA:3.90.226.10 274 528 1.5E-92 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS08330 126293bfafde2d4c94ab87adc7d18496 534 SUPERFAMILY SSF52096 236 516 8.53E-88 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS08330 126293bfafde2d4c94ab87adc7d18496 534 PANTHER PTHR22855 1 534 0.0 T 13-09-2016 PMA3_RS08330 126293bfafde2d4c94ab87adc7d18496 534 SUPERFAMILY SSF52096 22 269 6.26E-75 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS08330 126293bfafde2d4c94ab87adc7d18496 534 Pfam PF01039 Carboxyl transferase domain 47 524 9.5E-153 T 13-09-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 SUPERFAMILY SSF47240 1 154 1.39E-46 T 13-09-2016 IPR009078 Ferritin-like superfamily PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 7.7E-47 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 PRINTS PR00601 Bacterioferritin signature 85 105 1.6E-38 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 PRINTS PR00601 Bacterioferritin signature 128 149 1.6E-38 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 PRINTS PR00601 Bacterioferritin signature 106 126 1.6E-38 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 PRINTS PR00601 Bacterioferritin signature 3 22 1.6E-38 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 PRINTS PR00601 Bacterioferritin signature 23 43 1.6E-38 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 PRINTS PR00601 Bacterioferritin signature 44 64 1.6E-38 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 Pfam PF00210 Ferritin-like domain 8 143 3.8E-36 T 13-09-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 PANTHER PTHR30295:SF9 1 153 7.9E-92 T 13-09-2016 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 PANTHER PTHR30295 1 153 7.9E-92 T 13-09-2016 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 Gene3D G3DSA:1.20.1260.10 1 153 1.1E-54 T 13-09-2016 IPR012347 Ferritin-related PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 PIRSF PIRSF002560 1 154 3.3E-62 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS27130 cd798cb5944aa91eb2a110011178f74f 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 Gene3D G3DSA:1.20.140.10 268 465 5.9E-46 T 13-09-2016 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 PANTHER PTHR10909 1 478 2.8E-262 T 13-09-2016 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 Gene3D G3DSA:2.40.110.10 161 267 6.9E-27 T 13-09-2016 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 Gene3D G3DSA:1.10.540.10 39 160 3.6E-19 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 451 3.2E-19 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 3.1E-10 T 13-09-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 SUPERFAMILY SSF56645 38 279 7.59E-60 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 1.9E-17 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 3.7E-13 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 PANTHER PTHR10909:SF154 1 478 2.8E-262 T 13-09-2016 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 SUPERFAMILY SSF47203 287 475 1.59E-47 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS27765 e3d81409b4fa06fc2aa1b26add77ac68 601 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 592 1.6E-35 T 13-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 SUPERFAMILY SSF56425 278 424 8.89E-24 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 PANTHER PTHR11632 100 480 1.8E-64 T 13-09-2016 PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 PANTHER PTHR11632 1 84 1.8E-64 T 13-09-2016 PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 Gene3D G3DSA:3.90.700.10 279 413 8.8E-23 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 PANTHER PTHR11632:SF49 1 84 1.8E-64 T 13-09-2016 PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 PANTHER PTHR11632:SF49 100 480 1.8E-64 T 13-09-2016 PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 Gene3D G3DSA:3.50.50.60 3 256 2.5E-62 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 Gene3D G3DSA:3.50.50.60 420 479 2.5E-62 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 Pfam PF00890 FAD binding domain 7 461 4.3E-43 T 13-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 SUPERFAMILY SSF51905 3 266 3.76E-39 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 SUPERFAMILY SSF51905 423 479 3.76E-39 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.7E-5 T 13-09-2016 PMA3_RS18140 a186a45d4e99bbfb0604802332778f35 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 5.7E-5 T 13-09-2016 PMA3_RS23715 bbaa37471bde7ce6af14d6cd9b5a45c1 330 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 9 324 9.2E-112 T 13-09-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PMA3_RS23715 bbaa37471bde7ce6af14d6cd9b5a45c1 330 PANTHER PTHR30578 8 324 6.7E-104 T 13-09-2016 PMA3_RS23715 bbaa37471bde7ce6af14d6cd9b5a45c1 330 Pfam PF03116 NQR2, RnfD, RnfE family 9 324 2.1E-91 T 13-09-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 PMA3_RS23715 bbaa37471bde7ce6af14d6cd9b5a45c1 330 PANTHER PTHR30578:SF0 8 324 6.7E-104 T 13-09-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PMA3_RS23715 bbaa37471bde7ce6af14d6cd9b5a45c1 330 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 329 23.861 T 13-09-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PANTHER PTHR11946:SF5 877 941 0.0 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PANTHER PTHR11946:SF5 330 567 0.0 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PANTHER PTHR11946:SF5 605 857 0.0 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 SUPERFAMILY SSF52374 606 638 1.39E-136 T 13-09-2016 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 SUPERFAMILY SSF52374 1 189 1.39E-136 T 13-09-2016 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 SUPERFAMILY SSF52374 361 568 1.39E-136 T 13-09-2016 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PANTHER PTHR11946:SF5 1 311 0.0 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PANTHER PTHR11946 1 311 0.0 T 13-09-2016 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 928 0.0 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PANTHER PTHR11946 877 941 0.0 T 13-09-2016 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PANTHER PTHR11946 330 567 0.0 T 13-09-2016 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 881 944 6.2E-19 T 13-09-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 Gene3D G3DSA:1.10.287.380 875 945 1.8E-9 T 13-09-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 SUPERFAMILY SSF50677 188 362 1.31E-58 T 13-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 Gene3D G3DSA:1.10.730.10 628 813 6.6E-66 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 Gene3D G3DSA:3.40.50.620 3 190 5.2E-142 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 Gene3D G3DSA:3.40.50.620 361 568 5.2E-142 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 Gene3D G3DSA:3.40.50.620 606 627 5.2E-142 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 Pfam PF08264 Anticodon-binding domain of tRNA 669 821 9.5E-44 T 13-09-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 Gene3D G3DSA:3.90.740.10 191 355 1.5E-46 T 13-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PANTHER PTHR11946 605 857 0.0 T 13-09-2016 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PRINTS PR00986 Valyl-tRNA synthetase signature 466 487 3.6E-34 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 3.6E-34 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 3.6E-34 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PRINTS PR00986 Valyl-tRNA synthetase signature 366 379 3.6E-34 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 PRINTS PR00986 Valyl-tRNA synthetase signature 497 515 3.6E-34 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 SUPERFAMILY SSF46589 881 945 1.67E-17 T 13-09-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 SUPERFAMILY SSF47323 639 893 1.31E-69 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 628 7.1E-213 T 13-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 13-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS04335 95cd91f0dd063baabe1989ff6b602156 948 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 946 16.131 T 13-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 PANTHER PTHR30425 316 525 7.0E-171 T 13-09-2016 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 508 755 8.3E-10 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 SUPERFAMILY SSF161098 606 692 6.98E-18 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 SUPERFAMILY SSF161098 455 522 6.98E-18 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 PANTHER PTHR30425:SF3 591 760 7.0E-171 T 13-09-2016 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 PANTHER PTHR30425 591 760 7.0E-171 T 13-09-2016 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 PANTHER PTHR30425:SF3 316 525 7.0E-171 T 13-09-2016 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 SUPERFAMILY SSF50998 106 372 1.65E-6 T 13-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 Gene3D G3DSA:1.10.3720.10 49 70 7.1E-44 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 Gene3D G3DSA:1.10.3720.10 596 757 7.1E-44 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 Gene3D G3DSA:1.10.3720.10 441 523 7.1E-44 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29705 ae9ee5faf3df9f7bc1bcbbc93baab1a8 760 Gene3D G3DSA:2.130.10.10 106 283 9.0E-4 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS17860 37a0d90a19352f37eeb34c2f4925ca5c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 98 111 2.7E-6 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17860 37a0d90a19352f37eeb34c2f4925ca5c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 250 269 2.7E-6 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17860 37a0d90a19352f37eeb34c2f4925ca5c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 152 166 2.7E-6 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS17860 37a0d90a19352f37eeb34c2f4925ca5c 350 Gene3D G3DSA:3.40.190.10 152 289 1.0E-30 T 13-09-2016 PMA3_RS17860 37a0d90a19352f37eeb34c2f4925ca5c 350 PANTHER PTHR30006:SF7 7 347 3.6E-47 T 13-09-2016 PMA3_RS17860 37a0d90a19352f37eeb34c2f4925ca5c 350 PANTHER PTHR30006 7 347 3.6E-47 T 13-09-2016 PMA3_RS17860 37a0d90a19352f37eeb34c2f4925ca5c 350 Gene3D G3DSA:3.40.190.10 30 151 1.2E-13 T 13-09-2016 PMA3_RS17860 37a0d90a19352f37eeb34c2f4925ca5c 350 Pfam PF13416 Bacterial extracellular solute-binding protein 48 310 3.9E-27 T 13-09-2016 PMA3_RS17860 37a0d90a19352f37eeb34c2f4925ca5c 350 SUPERFAMILY SSF53850 29 345 1.22E-54 T 13-09-2016 PMA3_RS24845 4b71b368514e7cb53f99894d629fa355 455 Pfam PF07044 Protein of unknown function (DUF1329) 83 450 5.4E-149 T 13-09-2016 IPR010752 Protein of unknown function DUF1329 PMA3_RS24845 4b71b368514e7cb53f99894d629fa355 455 Gene3D G3DSA:2.50.20.10 161 309 3.0E-38 T 13-09-2016 PMA3_RS24845 4b71b368514e7cb53f99894d629fa355 455 Gene3D G3DSA:2.50.20.10 342 450 3.0E-38 T 13-09-2016 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 421 430 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 Gene3D G3DSA:3.30.70.260 2 72 9.7E-11 T 13-09-2016 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 SUPERFAMILY SSF55785 84 143 3.62E-8 T 13-09-2016 IPR000014 PAS domain PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 Gene3D G3DSA:3.40.50.300 204 380 2.2E-50 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 Pfam PF00158 Sigma-54 interaction domain 208 374 6.0E-58 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 Gene3D G3DSA:1.10.8.60 387 450 5.1E-21 T 13-09-2016 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 SMART SM00382 227 372 5.1E-7 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 SUPERFAMILY SSF52540 207 449 7.7E-61 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 Gene3D G3DSA:1.10.10.60 459 515 5.9E-24 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 PANTHER PTHR32071 8 519 4.1E-197 T 13-09-2016 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 PANTHER PTHR32071:SF3 8 519 4.1E-197 T 13-09-2016 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 Gene3D G3DSA:3.30.450.20 80 135 6.4E-7 T 13-09-2016 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 469 516 3.8E-25 T 13-09-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 SUPERFAMILY SSF46689 460 515 3.82E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 SUPERFAMILY SSF55021 2 72 1.62E-8 T 13-09-2016 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 231 244 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 Pfam PF13188 PAS domain 87 136 2.0E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS21820 d0113c66291f3d856fbbe94d613d7785 519 SMART SM00091 82 148 4.7E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 592 1.3E-27 T 13-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 Gene3D G3DSA:1.10.1040.10 633 711 3.4E-14 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 SUPERFAMILY SSF48179 496 614 1.19E-29 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 13-09-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 Gene3D G3DSA:1.10.1040.10 499 593 9.3E-23 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 PANTHER PTHR23309 8 715 0.0 T 13-09-2016 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 Gene3D G3DSA:3.90.226.10 5 205 1.1E-57 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 PANTHER PTHR23309:SF18 8 715 0.0 T 13-09-2016 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.488 T 13-09-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 SUPERFAMILY SSF48179 622 714 1.45E-23 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 SUPERFAMILY SSF51735 312 496 1.25E-57 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 203 7.3E-42 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 1.3E-61 T 13-09-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 13-09-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 SUPERFAMILY SSF52096 2 307 3.56E-67 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 13-09-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS08605 12dd101e2648cba0c167a677ceedf604 715 Gene3D G3DSA:3.40.50.720 310 498 1.7E-59 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS02020 f95cebaa6116340bc097072c47ed40d4 180 Hamap MF_00045 Oligoribonuclease [orn]. 2 180 42.516 T 13-09-2016 IPR022894 Oligoribonuclease GO:0016788 PMA3_RS02020 f95cebaa6116340bc097072c47ed40d4 180 SUPERFAMILY SSF53098 1 179 3.1E-47 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS02020 f95cebaa6116340bc097072c47ed40d4 180 PANTHER PTHR11046:SF1 1 180 3.1E-116 T 13-09-2016 PMA3_RS02020 f95cebaa6116340bc097072c47ed40d4 180 Pfam PF00929 Exonuclease 8 169 1.9E-32 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS02020 f95cebaa6116340bc097072c47ed40d4 180 SMART SM00479 6 179 2.4E-24 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS02020 f95cebaa6116340bc097072c47ed40d4 180 Gene3D G3DSA:3.30.420.10 3 178 6.5E-72 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS02020 f95cebaa6116340bc097072c47ed40d4 180 PANTHER PTHR11046 1 180 3.1E-116 T 13-09-2016 PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 PANTHER PTHR24220 319 365 4.8E-179 T 13-09-2016 PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 Gene3D G3DSA:3.40.50.300 3 234 1.5E-76 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 Gene3D G3DSA:2.40.50.140 286 345 2.5E-14 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 PANTHER PTHR24220:SF319 5 240 4.8E-179 T 13-09-2016 PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 PANTHER PTHR24220:SF319 319 365 4.8E-179 T 13-09-2016 PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 Pfam PF00005 ABC transporter 20 161 7.5E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 PANTHER PTHR24220 5 240 4.8E-179 T 13-09-2016 PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 SMART SM00382 28 211 6.4E-14 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 SUPERFAMILY SSF52540 4 240 3.02E-84 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 Pfam PF08402 TOBE domain 281 352 4.9E-11 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 Gene3D G3DSA:2.40.50.100 346 359 7.0E-21 T 13-09-2016 PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 Gene3D G3DSA:2.40.50.100 239 285 7.0E-21 T 13-09-2016 PMA3_RS13380 d7cf4ce742a845cffb65904f348ee7d4 367 SUPERFAMILY SSF50331 236 356 7.53E-31 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS21125 1bd9535dd2d46ce1aa7bc15ab12d93d5 469 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 160 2.7E-18 T 13-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PMA3_RS21125 1bd9535dd2d46ce1aa7bc15ab12d93d5 469 Gene3D G3DSA:3.40.50.300 7 193 2.0E-18 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21125 1bd9535dd2d46ce1aa7bc15ab12d93d5 469 Gene3D G3DSA:3.40.50.880 239 423 7.4E-23 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS21125 1bd9535dd2d46ce1aa7bc15ab12d93d5 469 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 240 421 1.8E-30 T 13-09-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 PMA3_RS21125 1bd9535dd2d46ce1aa7bc15ab12d93d5 469 SUPERFAMILY SSF52540 9 194 4.46E-38 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21125 1bd9535dd2d46ce1aa7bc15ab12d93d5 469 SUPERFAMILY SSF52317 238 429 2.9E-29 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS21125 1bd9535dd2d46ce1aa7bc15ab12d93d5 469 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 7 422 36.927 T 13-09-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 PMA3_RS21125 1bd9535dd2d46ce1aa7bc15ab12d93d5 469 PANTHER PTHR21343 7 468 1.9E-129 T 13-09-2016 PMA3_RS21125 1bd9535dd2d46ce1aa7bc15ab12d93d5 469 PANTHER PTHR21343:SF6 7 468 1.9E-129 T 13-09-2016 PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 SMART SM00267 239 411 1.5E-39 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 Gene3D G3DSA:3.20.20.450 424 675 1.2E-100 T 13-09-2016 IPR001633 EAL domain PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 Pfam PF00990 Diguanylate cyclase, GGDEF domain 250 407 5.9E-36 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 SUPERFAMILY SSF55073 255 411 2.12E-36 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 Pfam PF00563 EAL domain 427 662 4.6E-77 T 13-09-2016 IPR001633 EAL domain PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 SMART SM00052 421 667 4.8E-124 T 13-09-2016 IPR001633 EAL domain PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 SUPERFAMILY SSF141868 426 676 1.06E-93 T 13-09-2016 IPR001633 EAL domain PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 Gene3D G3DSA:3.30.70.270 252 419 8.6E-43 T 13-09-2016 PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 PANTHER PTHR33121 371 679 8.6E-96 T 13-09-2016 PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 409 1.8E-28 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 PANTHER PTHR33121 33 42 8.6E-96 T 13-09-2016 PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 PANTHER PTHR33121:SF13 371 679 8.6E-96 T 13-09-2016 PMA3_RS23615 c27be70378bc786d788eeaa33bc6096c 683 PANTHER PTHR33121:SF13 33 42 8.6E-96 T 13-09-2016 PMA3_RS16635 73e8712387ab21d258bac98ed3fb1175 521 Pfam PF13520 Amino acid permease 34 473 5.6E-48 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS16635 73e8712387ab21d258bac98ed3fb1175 521 PANTHER PTHR11785:SF228 1 519 2.0E-59 T 13-09-2016 PMA3_RS16635 73e8712387ab21d258bac98ed3fb1175 521 PIRSF PIRSF006060 10 507 6.3E-45 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS16635 73e8712387ab21d258bac98ed3fb1175 521 PANTHER PTHR11785 1 519 2.0E-59 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS18010 778a22a810919566d0c9f26aacfa931b 223 PANTHER PTHR10108 17 215 2.0E-16 T 13-09-2016 PMA3_RS18010 778a22a810919566d0c9f26aacfa931b 223 PANTHER PTHR10108:SF779 17 215 2.0E-16 T 13-09-2016 PMA3_RS18010 778a22a810919566d0c9f26aacfa931b 223 Gene3D G3DSA:3.40.50.150 40 204 1.8E-26 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS18010 778a22a810919566d0c9f26aacfa931b 223 Pfam PF13489 Methyltransferase domain 43 157 1.4E-15 T 13-09-2016 PMA3_RS18010 778a22a810919566d0c9f26aacfa931b 223 SUPERFAMILY SSF53335 45 208 5.94E-29 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS10880 3065ad1ea2a5ddd2d78cf85fa99919a5 561 PANTHER PTHR22773:SF49 386 547 3.3E-103 T 13-09-2016 PMA3_RS10880 3065ad1ea2a5ddd2d78cf85fa99919a5 561 PANTHER PTHR22773 386 547 3.3E-103 T 13-09-2016 PMA3_RS10880 3065ad1ea2a5ddd2d78cf85fa99919a5 561 Pfam PF00361 Proton-conducting membrane transporter 134 441 2.8E-29 T 13-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PMA3_RS10880 3065ad1ea2a5ddd2d78cf85fa99919a5 561 PANTHER PTHR22773:SF49 1 362 3.3E-103 T 13-09-2016 PMA3_RS10880 3065ad1ea2a5ddd2d78cf85fa99919a5 561 PANTHER PTHR22773 1 362 3.3E-103 T 13-09-2016 PMA3_RS19825 afc42a2e582220be44920b56765a8f1f 250 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 4.7E-102 T 13-09-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 PMA3_RS19825 afc42a2e582220be44920b56765a8f1f 250 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 123.408 T 13-09-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 PMA3_RS19825 afc42a2e582220be44920b56765a8f1f 250 SUPERFAMILY SSF56300 2 244 5.18E-28 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS19825 afc42a2e582220be44920b56765a8f1f 250 Pfam PF00149 Calcineurin-like phosphoesterase 2 198 9.4E-9 T 13-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PMA3_RS19825 afc42a2e582220be44920b56765a8f1f 250 PANTHER PTHR34990:SF1 3 239 7.1E-108 T 13-09-2016 PMA3_RS19825 afc42a2e582220be44920b56765a8f1f 250 Gene3D G3DSA:3.60.21.10 2 124 1.5E-19 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS19825 afc42a2e582220be44920b56765a8f1f 250 Gene3D G3DSA:3.60.21.10 172 219 1.5E-19 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS19825 afc42a2e582220be44920b56765a8f1f 250 PANTHER PTHR34990 3 239 7.1E-108 T 13-09-2016 PMA3_RS14585 0824661917d5ee9cf2dd962ced4033e2 136 Pfam PF06146 Phosphate-starvation-inducible E 55 124 9.0E-16 T 13-09-2016 IPR020948 Phosphate-starvation-induced PsiE-like PMA3_RS27615 97544cc2b453f1993681939aa7e87cd8 189 PANTHER PTHR30309 1 189 3.1E-66 T 13-09-2016 PMA3_RS27615 97544cc2b453f1993681939aa7e87cd8 189 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 189 17.959 T 13-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PMA3_RS27615 97544cc2b453f1993681939aa7e87cd8 189 Pfam PF02660 Glycerol-3-phosphate acyltransferase 8 181 2.3E-49 T 13-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PMA3_RS27615 97544cc2b453f1993681939aa7e87cd8 189 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 187 6.0E-51 T 13-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PMA3_RS27615 97544cc2b453f1993681939aa7e87cd8 189 PANTHER PTHR30309:SF0 1 189 3.1E-66 T 13-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PMA3_RS27615 97544cc2b453f1993681939aa7e87cd8 189 SMART SM01207 7 182 2.2E-75 T 13-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.248 T 13-09-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 PANTHER PTHR11907:SF4 1 478 1.2E-271 T 13-09-2016 PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 SUPERFAMILY SSF53271 250 483 1.05E-70 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 PIRSF PIRSF000485 1 481 3.3E-160 T 13-09-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 Gene3D G3DSA:3.40.50.2020 271 444 7.9E-46 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 Pfam PF13522 Glutamine amidotransferase domain 65 208 2.4E-15 T 13-09-2016 PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 PANTHER PTHR11907 1 478 1.2E-271 T 13-09-2016 PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 SUPERFAMILY SSF56235 2 257 2.06E-71 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 8.2E-162 T 13-09-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 Gene3D G3DSA:3.60.20.10 2 257 5.5E-62 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS09080 502f3d840b54aa19cc49565637f239f7 501 Pfam PF00156 Phosphoribosyl transferase domain 276 393 6.3E-9 T 13-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PMA3_RS20120 70e538cccb64c342b95b3c0d711a9a44 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 382 1.4E-45 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS20120 70e538cccb64c342b95b3c0d711a9a44 390 Gene3D G3DSA:1.20.1600.10 108 175 1.4E-4 T 13-09-2016 PMA3_RS20120 70e538cccb64c342b95b3c0d711a9a44 390 PANTHER PTHR30572:SF3 11 383 1.8E-118 T 13-09-2016 PMA3_RS20120 70e538cccb64c342b95b3c0d711a9a44 390 SUPERFAMILY SSF111369 51 241 1.44E-23 T 13-09-2016 PMA3_RS20120 70e538cccb64c342b95b3c0d711a9a44 390 Gene3D G3DSA:2.40.50.100 183 214 9.6E-19 T 13-09-2016 PMA3_RS20120 70e538cccb64c342b95b3c0d711a9a44 390 Gene3D G3DSA:2.40.50.100 62 94 9.6E-19 T 13-09-2016 PMA3_RS20120 70e538cccb64c342b95b3c0d711a9a44 390 PANTHER PTHR30572 11 383 1.8E-118 T 13-09-2016 PMA3_RS20120 70e538cccb64c342b95b3c0d711a9a44 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 265 6.2E-20 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Gene3D G3DSA:1.10.155.10 231 297 1.8E-13 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Pfam PF00989 PAS fold 546 651 9.7E-7 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Pfam PF03705 CheR methyltransferase, all-alpha domain 242 290 1.7E-12 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SUPERFAMILY SSF53335 303 501 4.91E-52 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SUPERFAMILY SSF47384 998 1079 3.92E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Gene3D G3DSA:3.30.450.20 545 652 1.3E-8 T 13-09-2016 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SUPERFAMILY SSF55785 768 872 9.25E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SUPERFAMILY SSF47757 236 305 1.7E-12 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Pfam PF13426 PAS domain 889 988 2.2E-8 T 13-09-2016 IPR000014 PAS domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 875 996 1.5E-18 T 13-09-2016 IPR000014 PAS domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Gene3D G3DSA:3.40.50.2300 1255 1374 1.6E-31 T 13-09-2016 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Pfam PF13596 PAS domain 757 861 2.5E-23 T 13-09-2016 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 PRINTS PR00996 Glutamate methyltransferase family signature 376 392 7.7E-31 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 PRINTS PR00996 Glutamate methyltransferase family signature 259 272 7.7E-31 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 PRINTS PR00996 Glutamate methyltransferase family signature 296 308 7.7E-31 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 PRINTS PR00996 Glutamate methyltransferase family signature 461 484 7.7E-31 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 PRINTS PR00996 Glutamate methyltransferase family signature 340 360 7.7E-31 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 PRINTS PR00996 Glutamate methyltransferase family signature 442 456 7.7E-31 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Gene3D G3DSA:3.30.450.20 876 988 3.0E-22 T 13-09-2016 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Pfam PF00072 Response regulator receiver domain 1259 1370 5.8E-22 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SMART SM00387 1122 1236 9.5E-35 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SUPERFAMILY SSF55874 1067 1236 7.86E-38 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 PANTHER PTHR24422:SF6 118 873 1.7E-209 T 13-09-2016 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Pfam PF01739 CheR methyltransferase, SAM binding domain 304 495 3.1E-58 T 13-09-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1123 1235 3.0E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SMART SM00388 1010 1078 6.6E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Gene3D G3DSA:1.10.287.130 1005 1064 2.1E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Gene3D G3DSA:3.30.450.20 757 875 2.0E-8 T 13-09-2016 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SMART SM00138 237 502 2.4E-120 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SUPERFAMILY SSF55785 546 650 5.93E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 PANTHER PTHR24422 118 873 1.7E-209 T 13-09-2016 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SMART SM00448 1257 1370 6.2E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Gene3D G3DSA:3.30.565.10 1065 1235 3.5E-38 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SUPERFAMILY SSF52172 1255 1375 6.26E-32 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Pfam PF01339 CheB methylesterase 27 202 2.8E-48 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Gene3D G3DSA:3.40.50.150 302 501 6.0E-67 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1011 1078 9.8E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SUPERFAMILY SSF52738 24 208 1.57E-48 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 Gene3D G3DSA:3.40.50.180 23 209 3.7E-57 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SMART SM00091 543 608 0.02 T 13-09-2016 IPR000014 PAS domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SMART SM00091 876 942 1.8E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SMART SM00091 755 820 2.9 T 13-09-2016 IPR000014 PAS domain PMA3_RS05755 ba15a5e5df326ec657a10e3eec84a844 1378 SUPERFAMILY SSF55785 861 988 3.66E-20 T 13-09-2016 IPR000014 PAS domain PMA3_RS13595 f04d0cd7259ba0cd2d04239f4115ac03 310 PANTHER PTHR11732:SF215 1 298 3.3E-144 T 13-09-2016 PMA3_RS13595 f04d0cd7259ba0cd2d04239f4115ac03 310 PANTHER PTHR11732 1 298 3.3E-144 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS13595 f04d0cd7259ba0cd2d04239f4115ac03 310 Gene3D G3DSA:3.20.20.100 6 297 1.3E-93 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS13595 f04d0cd7259ba0cd2d04239f4115ac03 310 SUPERFAMILY SSF51430 8 290 1.09E-86 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS13595 f04d0cd7259ba0cd2d04239f4115ac03 310 Pfam PF00248 Aldo/keto reductase family 10 287 3.0E-70 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS19730 915771430f61c01fce292ed773582242 487 PANTHER PTHR22773 1 483 8.2E-175 T 13-09-2016 PMA3_RS19730 915771430f61c01fce292ed773582242 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 416 435 6.0E-5 T 13-09-2016 PMA3_RS19730 915771430f61c01fce292ed773582242 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 217 238 6.0E-5 T 13-09-2016 PMA3_RS19730 915771430f61c01fce292ed773582242 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 6.0E-5 T 13-09-2016 PMA3_RS19730 915771430f61c01fce292ed773582242 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 70 95 6.0E-5 T 13-09-2016 PMA3_RS19730 915771430f61c01fce292ed773582242 487 Pfam PF00361 Proton-conducting membrane transporter 126 422 1.4E-79 T 13-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PMA3_RS19730 915771430f61c01fce292ed773582242 487 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 476 1.0E-127 T 13-09-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PMA3_RS19730 915771430f61c01fce292ed773582242 487 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 477 17.717 T 13-09-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PMA3_RS19730 915771430f61c01fce292ed773582242 487 PANTHER PTHR22773:SF41 1 483 8.2E-175 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.3E-13 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.3E-13 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.3E-13 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 Pfam PF00117 Glutamine amidotransferase class-I 4 191 3.9E-56 T 13-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 4.1E-88 T 13-09-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PANTHER PTHR11922 1 197 4.3E-99 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-36 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-36 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.8E-36 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-36 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-36 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-36 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PANTHER PTHR11922:SF7 1 197 4.3E-99 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 SUPERFAMILY SSF52317 1 192 1.25E-55 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.7E-6 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.7E-6 T 13-09-2016 PMA3_RS27475 ab250c1713e42278835a4c44715baaba 197 Gene3D G3DSA:3.40.50.880 2 193 2.5E-67 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS18440 924948f5d0038c9a01e539ec6da201e3 268 SMART SM00530 18 73 1.9E-10 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS18440 924948f5d0038c9a01e539ec6da201e3 268 Pfam PF13560 Helix-turn-helix domain 17 70 1.1E-10 T 13-09-2016 PMA3_RS18440 924948f5d0038c9a01e539ec6da201e3 268 Gene3D G3DSA:1.10.260.40 16 71 5.7E-14 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS18440 924948f5d0038c9a01e539ec6da201e3 268 SUPERFAMILY SSF47413 14 71 9.12E-13 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS18440 924948f5d0038c9a01e539ec6da201e3 268 PANTHER PTHR10245:SF17 17 263 7.1E-24 T 13-09-2016 PMA3_RS18440 924948f5d0038c9a01e539ec6da201e3 268 PANTHER PTHR10245 17 263 7.1E-24 T 13-09-2016 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 Gene3D G3DSA:1.10.3860.10 6 404 3.0E-112 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 Pfam PF00375 Sodium:dicarboxylate symporter family 8 400 4.1E-110 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 PANTHER PTHR11958 8 454 5.2E-210 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 PRINTS PR00173 Glutamate-aspartate symporter signature 291 317 2.4E-28 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 PRINTS PR00173 Glutamate-aspartate symporter signature 73 98 2.4E-28 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 PRINTS PR00173 Glutamate-aspartate symporter signature 144 166 2.4E-28 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 PRINTS PR00173 Glutamate-aspartate symporter signature 191 210 2.4E-28 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 2.4E-28 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 PRINTS PR00173 Glutamate-aspartate symporter signature 326 345 2.4E-28 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 35 50 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 SUPERFAMILY SSF118215 8 400 2.75E-116 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 294 317 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19225 3b0fa31a7ad7d8a8e95cd69d124a1943 462 PANTHER PTHR11958:SF49 8 454 5.2E-210 T 13-09-2016 PMA3_RS11055 0bb230f508608afc38fe48dfeb135900 448 SUPERFAMILY SSF55931 121 448 7.26E-83 T 13-09-2016 PMA3_RS11055 0bb230f508608afc38fe48dfeb135900 448 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 255 270 - T 13-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS11055 0bb230f508608afc38fe48dfeb135900 448 Pfam PF00120 Glutamine synthetase, catalytic domain 121 446 3.0E-76 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS11055 0bb230f508608afc38fe48dfeb135900 448 PANTHER PTHR20852 89 448 5.2E-82 T 13-09-2016 PMA3_RS11055 0bb230f508608afc38fe48dfeb135900 448 SMART SM01230 119 371 5.5E-78 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS11055 0bb230f508608afc38fe48dfeb135900 448 PANTHER PTHR20852:SF7 89 448 5.2E-82 T 13-09-2016 PMA3_RS11055 0bb230f508608afc38fe48dfeb135900 448 Gene3D G3DSA:3.30.590.10 122 436 7.2E-71 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS07655 01cd03f81ac7735155bf6866412d66e5 128 Gene3D G3DSA:3.40.30.10 22 121 5.5E-8 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07655 01cd03f81ac7735155bf6866412d66e5 128 SUPERFAMILY SSF52833 21 128 2.75E-13 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS28505 143a77dec88432627c1c402ea8778a83 198 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 5 197 47.981 T 13-09-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PMA3_RS28505 143a77dec88432627c1c402ea8778a83 198 PANTHER PTHR11067 1 195 2.0E-76 T 13-09-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PMA3_RS28505 143a77dec88432627c1c402ea8778a83 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 7 194 2.4E-55 T 13-09-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PMA3_RS28505 143a77dec88432627c1c402ea8778a83 198 SUPERFAMILY SSF52972 3 195 5.76E-68 T 13-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PMA3_RS28505 143a77dec88432627c1c402ea8778a83 198 Gene3D G3DSA:3.90.950.10 4 195 5.8E-75 T 13-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PMA3_RS28505 143a77dec88432627c1c402ea8778a83 198 PANTHER PTHR11067:SF9 1 195 2.0E-76 T 13-09-2016 PMA3_RS28505 143a77dec88432627c1c402ea8778a83 198 Pfam PF01725 Ham1 family 7 192 8.7E-55 T 13-09-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 Gene3D G3DSA:3.20.19.10 605 856 4.2E-64 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 858 0.0 T 13-09-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 Gene3D G3DSA:3.40.1060.10 227 360 3.4E-37 T 13-09-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PANTHER PTHR11670:SF43 719 860 0.0 T 13-09-2016 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PANTHER PTHR11670 719 860 0.0 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 SUPERFAMILY SSF53732 18 586 2.35E-182 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PRINTS PR00415 Aconitase family signature 402 413 9.5E-28 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PRINTS PR00415 Aconitase family signature 138 151 9.5E-28 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PRINTS PR00415 Aconitase family signature 162 170 9.5E-28 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PRINTS PR00415 Aconitase family signature 267 280 9.5E-28 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PRINTS PR00415 Aconitase family signature 191 204 9.5E-28 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PRINTS PR00415 Aconitase family signature 464 477 9.5E-28 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PRINTS PR00415 Aconitase family signature 360 374 9.5E-28 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PRINTS PR00415 Aconitase family signature 281 294 9.5E-28 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PRINTS PR00415 Aconitase family signature 205 220 9.5E-28 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 Pfam PF00694 Aconitase C-terminal domain 656 786 1.6E-29 T 13-09-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 1.2E-148 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 SUPERFAMILY SSF52016 597 856 5.69E-67 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PANTHER PTHR11670:SF43 8 676 0.0 T 13-09-2016 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 Gene3D G3DSA:3.30.499.10 361 545 2.3E-54 T 13-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 Gene3D G3DSA:3.30.499.10 22 226 1.9E-63 T 13-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20490 cd9d0980249d8a00985aea02be9b42fb 864 PANTHER PTHR11670 8 676 0.0 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08525 53d5b06367f5f431205d27c5a7a07da0 262 Pfam PF02517 CAAX protease self-immunity 160 251 3.6E-15 T 13-09-2016 IPR003675 CAAX amino terminal protease GO:0016020 PMA3_RS08525 53d5b06367f5f431205d27c5a7a07da0 262 PANTHER PTHR40041 50 262 3.0E-33 T 13-09-2016 PMA3_RS08525 53d5b06367f5f431205d27c5a7a07da0 262 PANTHER PTHR40041:SF2 50 262 3.0E-33 T 13-09-2016 PMA3_RS19540 426172a13fa88a87b51283f4aad85ae1 333 PANTHER PTHR10515 7 278 1.0E-44 T 13-09-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 PMA3_RS19540 426172a13fa88a87b51283f4aad85ae1 333 SUPERFAMILY SSF52418 88 329 3.14E-57 T 13-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PMA3_RS19540 426172a13fa88a87b51283f4aad85ae1 333 Gene3D G3DSA:1.20.970.10 24 83 2.3E-18 T 13-09-2016 PMA3_RS19540 426172a13fa88a87b51283f4aad85ae1 333 Gene3D G3DSA:3.40.1030.10 91 328 4.0E-39 T 13-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PMA3_RS19540 426172a13fa88a87b51283f4aad85ae1 333 Pfam PF02885 Glycosyl transferase family, helical bundle domain 28 82 3.8E-16 T 13-09-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PMA3_RS19540 426172a13fa88a87b51283f4aad85ae1 333 SUPERFAMILY SSF47648 24 84 1.7E-15 T 13-09-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PMA3_RS17160 e0c2dfe7d8b4bffdbe27eec57eb9ced7 255 SUPERFAMILY SSF161098 60 242 1.57E-31 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17160 e0c2dfe7d8b4bffdbe27eec57eb9ced7 255 PANTHER PTHR30043 2 254 3.2E-87 T 13-09-2016 PMA3_RS17160 e0c2dfe7d8b4bffdbe27eec57eb9ced7 255 Gene3D G3DSA:1.10.3720.10 58 252 4.0E-25 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17160 e0c2dfe7d8b4bffdbe27eec57eb9ced7 255 PANTHER PTHR30043:SF1 2 254 3.2E-87 T 13-09-2016 PMA3_RS17160 e0c2dfe7d8b4bffdbe27eec57eb9ced7 255 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 4 252 1.8E-73 T 13-09-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 PMA3_RS17160 e0c2dfe7d8b4bffdbe27eec57eb9ced7 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 248 4.9E-16 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS15775 2fe56c1d5987505e8d876df85a6e3d0e 352 SMART SM00861 19 194 4.0E-68 T 13-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PMA3_RS15775 2fe56c1d5987505e8d876df85a6e3d0e 352 Pfam PF02780 Transketolase, C-terminal domain 227 342 6.9E-37 T 13-09-2016 IPR033248 Transketolase, C-terminal domain PMA3_RS15775 2fe56c1d5987505e8d876df85a6e3d0e 352 PANTHER PTHR11624:SF55 18 352 1.7E-244 T 13-09-2016 PMA3_RS15775 2fe56c1d5987505e8d876df85a6e3d0e 352 Pfam PF02779 Transketolase, pyrimidine binding domain 18 193 2.0E-45 T 13-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PMA3_RS15775 2fe56c1d5987505e8d876df85a6e3d0e 352 PANTHER PTHR11624 18 352 1.7E-244 T 13-09-2016 IPR033247 Transketolase family PMA3_RS15775 2fe56c1d5987505e8d876df85a6e3d0e 352 SUPERFAMILY SSF52518 17 234 2.65E-67 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS15775 2fe56c1d5987505e8d876df85a6e3d0e 352 Gene3D G3DSA:3.40.50.970 16 226 9.5E-83 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS15775 2fe56c1d5987505e8d876df85a6e3d0e 352 SUPERFAMILY SSF52922 220 350 2.36E-42 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS15775 2fe56c1d5987505e8d876df85a6e3d0e 352 Gene3D G3DSA:3.40.50.920 229 347 9.0E-45 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS26495 59108c3cb7a5108f20280cabccc67946 244 Gene3D G3DSA:1.10.10.10 6 88 9.9E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26495 59108c3cb7a5108f20280cabccc67946 244 PANTHER PTHR39168:SF1 1 240 1.3E-59 T 13-09-2016 PMA3_RS26495 59108c3cb7a5108f20280cabccc67946 244 SMART SM00418 9 88 2.2E-12 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS26495 59108c3cb7a5108f20280cabccc67946 244 Pfam PF12840 Helix-turn-helix domain 9 64 2.0E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26495 59108c3cb7a5108f20280cabccc67946 244 PANTHER PTHR39168 1 240 1.3E-59 T 13-09-2016 PMA3_RS26495 59108c3cb7a5108f20280cabccc67946 244 SUPERFAMILY SSF46785 6 87 2.48E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24855 585d42ba42ee53904f51e045d238cd54 255 SUPERFAMILY SSF55846 11 174 2.49E-44 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS24855 585d42ba42ee53904f51e045d238cd54 255 PANTHER PTHR30417 1 253 9.8E-115 T 13-09-2016 PMA3_RS24855 585d42ba42ee53904f51e045d238cd54 255 SUPERFAMILY SSF47090 183 254 2.04E-17 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS24855 585d42ba42ee53904f51e045d238cd54 255 PANTHER PTHR30417:SF5 1 253 9.8E-115 T 13-09-2016 PMA3_RS24855 585d42ba42ee53904f51e045d238cd54 255 Gene3D G3DSA:3.40.80.10 11 177 1.1E-49 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS24855 585d42ba42ee53904f51e045d238cd54 255 SMART SM00644 7 158 2.8E-25 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS24855 585d42ba42ee53904f51e045d238cd54 255 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 159 4.3E-18 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS23850 8813b6e5b36ddf0fd263aa86ae1a3864 223 PANTHER PTHR30614:SF1 1 223 3.7E-127 T 13-09-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 PMA3_RS23850 8813b6e5b36ddf0fd263aa86ae1a3864 223 Gene3D G3DSA:1.10.3720.10 12 221 1.2E-41 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23850 8813b6e5b36ddf0fd263aa86ae1a3864 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 116 7.0E-24 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS23850 8813b6e5b36ddf0fd263aa86ae1a3864 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 221 4.4E-19 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23850 8813b6e5b36ddf0fd263aa86ae1a3864 223 PANTHER PTHR30614 1 223 3.7E-127 T 13-09-2016 PMA3_RS23850 8813b6e5b36ddf0fd263aa86ae1a3864 223 SUPERFAMILY SSF161098 13 213 9.42E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 PIRSF PIRSF001205 10 485 6.8E-206 T 13-09-2016 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 PRINTS PR00313 NodO calcium binding signature 390 399 7.4E-11 T 13-09-2016 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 PRINTS PR00313 NodO calcium binding signature 381 389 7.4E-11 T 13-09-2016 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 PRINTS PR00313 NodO calcium binding signature 372 380 7.4E-11 T 13-09-2016 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 PRINTS PR00313 NodO calcium binding signature 351 362 7.4E-11 T 13-09-2016 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 Gene3D G3DSA:3.40.390.10 47 270 1.3E-53 T 13-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 SUPERFAMILY SSF55486 29 267 6.6E-69 T 13-09-2016 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 183 250 2.6E-7 T 13-09-2016 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 Pfam PF08548 Peptidase M10 serralysin C terminal 269 480 1.8E-70 T 13-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 SUPERFAMILY SSF51120 272 477 3.53E-44 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 Gene3D G3DSA:2.150.10.10 283 461 3.9E-29 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 SMART SM00235 74 245 5.2E-17 T 13-09-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 377 395 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS13745 15998450cf1b9799b50e707fd042f2b2 485 PANTHER PTHR36921 26 434 5.0E-69 T 13-09-2016 PMA3_RS09145 856df2251effacdd26e71a5d87a3d83e 620 PANTHER PTHR34384 23 615 5.8E-152 T 13-09-2016 PMA3_RS09145 856df2251effacdd26e71a5d87a3d83e 620 Pfam PF04183 IucA / IucC family 161 405 1.6E-70 T 13-09-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 PMA3_RS09145 856df2251effacdd26e71a5d87a3d83e 620 PANTHER PTHR34384:SF5 23 615 5.8E-152 T 13-09-2016 PMA3_RS09145 856df2251effacdd26e71a5d87a3d83e 620 Pfam PF06276 Ferric iron reductase FhuF-like transporter 431 603 3.6E-36 T 13-09-2016 IPR022770 Ferric iron reductase FhuF domain PMA3_RS28785 bcbf8266fc4dd5c152b09d8f2f0665be 224 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 219 1.6E-62 T 13-09-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PMA3_RS28785 bcbf8266fc4dd5c152b09d8f2f0665be 224 PANTHER PTHR11934:SF11 1 224 3.4E-137 T 13-09-2016 PMA3_RS28785 bcbf8266fc4dd5c152b09d8f2f0665be 224 Gene3D G3DSA:3.30.70.260 141 200 2.6E-29 T 13-09-2016 PMA3_RS28785 bcbf8266fc4dd5c152b09d8f2f0665be 224 Gene3D G3DSA:3.40.50.1360 1 140 6.7E-57 T 13-09-2016 PMA3_RS28785 bcbf8266fc4dd5c152b09d8f2f0665be 224 PANTHER PTHR11934 1 224 3.4E-137 T 13-09-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PMA3_RS28785 bcbf8266fc4dd5c152b09d8f2f0665be 224 SUPERFAMILY SSF75445 131 202 4.97E-24 T 13-09-2016 PMA3_RS28785 bcbf8266fc4dd5c152b09d8f2f0665be 224 SUPERFAMILY SSF100950 1 150 3.31E-43 T 13-09-2016 PMA3_RS28785 bcbf8266fc4dd5c152b09d8f2f0665be 224 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 221 33.155 T 13-09-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PMA3_RS28785 bcbf8266fc4dd5c152b09d8f2f0665be 224 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 217 8.9E-58 T 13-09-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PMA3_RS27575 8b5b42b4f22fc92cce0a82e0c2904b6a 294 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 258 5.2E-99 T 13-09-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PMA3_RS27575 8b5b42b4f22fc92cce0a82e0c2904b6a 294 Pfam PF00149 Calcineurin-like phosphoesterase 4 140 2.3E-11 T 13-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PMA3_RS27575 8b5b42b4f22fc92cce0a82e0c2904b6a 294 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 272 48.005 T 13-09-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PMA3_RS27575 8b5b42b4f22fc92cce0a82e0c2904b6a 294 PIRSF PIRSF000903 1 276 2.9E-120 T 13-09-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PMA3_RS27575 8b5b42b4f22fc92cce0a82e0c2904b6a 294 PANTHER PTHR24032 1 266 3.5E-141 T 13-09-2016 PMA3_RS27575 8b5b42b4f22fc92cce0a82e0c2904b6a 294 SUPERFAMILY SSF56300 1 258 9.56E-59 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS27575 8b5b42b4f22fc92cce0a82e0c2904b6a 294 Gene3D G3DSA:3.60.21.10 170 269 8.6E-53 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS27575 8b5b42b4f22fc92cce0a82e0c2904b6a 294 Gene3D G3DSA:3.60.21.10 1 132 8.6E-53 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS27575 8b5b42b4f22fc92cce0a82e0c2904b6a 294 PANTHER PTHR24032:SF27 1 266 3.5E-141 T 13-09-2016 PMA3_RS26885 3a4866efb14924246426991518274341 263 PIRSF PIRSF012281 1 263 2.6E-112 T 13-09-2016 IPR012039 Uncharacterised conserved protein UCP012281 PMA3_RS26885 3a4866efb14924246426991518274341 263 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 193 249 2.9E-16 T 13-09-2016 IPR019220 Domain of unknown function DUF2135 PMA3_RS15935 dd43d1d94b93bad4df11021bf2b746c8 312 PANTHER PTHR30349:SF34 15 294 2.1E-20 T 13-09-2016 PMA3_RS15935 dd43d1d94b93bad4df11021bf2b746c8 312 Gene3D G3DSA:1.10.443.10 100 297 3.3E-55 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS15935 dd43d1d94b93bad4df11021bf2b746c8 312 Pfam PF00589 Phage integrase family 135 297 1.1E-14 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS15935 dd43d1d94b93bad4df11021bf2b746c8 312 Gene3D G3DSA:1.10.150.130 7 99 6.6E-24 T 13-09-2016 IPR023109 Integrase/recombinase, N-terminal PMA3_RS15935 dd43d1d94b93bad4df11021bf2b746c8 312 SUPERFAMILY SSF56349 98 298 1.5E-40 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS15935 dd43d1d94b93bad4df11021bf2b746c8 312 SUPERFAMILY SSF47823 7 97 5.89E-24 T 13-09-2016 IPR010998 Integrase, Lambda-type, N-terminal PMA3_RS15935 dd43d1d94b93bad4df11021bf2b746c8 312 PANTHER PTHR30349 15 294 2.1E-20 T 13-09-2016 PMA3_RS27775 c61996caf5a0d8b5b755356b8f4865b7 270 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 22 268 1.5E-75 T 13-09-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 PMA3_RS27775 c61996caf5a0d8b5b755356b8f4865b7 270 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 14 268 31.558 T 13-09-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 PMA3_RS27775 c61996caf5a0d8b5b755356b8f4865b7 270 SUPERFAMILY SSF53335 20 269 2.61E-42 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS27775 c61996caf5a0d8b5b755356b8f4865b7 270 Gene3D G3DSA:3.40.50.150 18 204 5.6E-39 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS27775 c61996caf5a0d8b5b755356b8f4865b7 270 PANTHER PTHR10108:SF855 23 195 1.7E-43 T 13-09-2016 PMA3_RS27775 c61996caf5a0d8b5b755356b8f4865b7 270 Pfam PF08241 Methyltransferase domain 58 151 1.9E-22 T 13-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PMA3_RS27775 c61996caf5a0d8b5b755356b8f4865b7 270 PANTHER PTHR10108 23 195 1.7E-43 T 13-09-2016 PMA3_RS07760 864eee10ede9618e0486e702046a3491 211 PANTHER PTHR11079:SF86 6 210 1.4E-64 T 13-09-2016 PMA3_RS07760 864eee10ede9618e0486e702046a3491 211 PANTHER PTHR11079 6 210 1.4E-64 T 13-09-2016 PMA3_RS07760 864eee10ede9618e0486e702046a3491 211 SUPERFAMILY SSF55120 5 210 1.23E-62 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS07760 864eee10ede9618e0486e702046a3491 211 Pfam PF00849 RNA pseudouridylate synthase 15 161 2.4E-29 T 13-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS07760 864eee10ede9618e0486e702046a3491 211 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 53 67 - T 13-09-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS10295 a4bd927f32241061dd8aef3a907b0c31 633 Pfam PF02705 K+ potassium transporter 23 555 3.1E-209 T 13-09-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 PMA3_RS10295 a4bd927f32241061dd8aef3a907b0c31 633 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 633 34.505 T 13-09-2016 IPR023051 Potassium uptake protein, low affinity, Kup PMA3_RS10295 a4bd927f32241061dd8aef3a907b0c31 633 PANTHER PTHR30540:SF7 25 559 2.8E-241 T 13-09-2016 PMA3_RS10295 a4bd927f32241061dd8aef3a907b0c31 633 PANTHER PTHR30540 25 559 2.8E-241 T 13-09-2016 PMA3_RS15030 574a98478ac4d74cf039c41f491847fb 166 Gene3D G3DSA:3.40.30.10 2 166 1.5E-46 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS15030 574a98478ac4d74cf039c41f491847fb 166 PANTHER PTHR10681 3 166 7.1E-49 T 13-09-2016 PMA3_RS15030 574a98478ac4d74cf039c41f491847fb 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 39.725 T 13-09-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 PMA3_RS15030 574a98478ac4d74cf039c41f491847fb 166 Pfam PF08534 Redoxin 19 162 1.1E-27 T 13-09-2016 IPR013740 Redoxin GO:0016491 PMA3_RS15030 574a98478ac4d74cf039c41f491847fb 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 13-09-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 PMA3_RS15030 574a98478ac4d74cf039c41f491847fb 166 SUPERFAMILY SSF52833 1 163 4.8E-43 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS15030 574a98478ac4d74cf039c41f491847fb 166 PANTHER PTHR10681:SF81 3 166 7.1E-49 T 13-09-2016 PMA3_RS02740 70120f680696970cf7a96a56d82c94df 265 Pfam PF08543 Phosphomethylpyrimidine kinase 17 253 5.8E-70 T 13-09-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 PMA3_RS02740 70120f680696970cf7a96a56d82c94df 265 SUPERFAMILY SSF53613 6 255 3.27E-62 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS02740 70120f680696970cf7a96a56d82c94df 265 PANTHER PTHR20858 1 252 2.0E-72 T 13-09-2016 PMA3_RS02740 70120f680696970cf7a96a56d82c94df 265 Gene3D G3DSA:3.40.1190.20 8 256 1.1E-72 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 Pfam PF02142 MGS-like domain 22 135 4.2E-26 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 SUPERFAMILY SSF53927 222 535 6.42E-129 T 13-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 Gene3D G3DSA:3.40.140.20 254 376 2.7E-46 T 13-09-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 SMART SM00851 22 135 7.3E-57 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 SMART SM00798 140 467 1.3E-209 T 13-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 11 535 2.9E-233 T 13-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 PANTHER PTHR11692 8 535 0.0 T 13-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 SUPERFAMILY SSF52335 10 197 8.11E-68 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 Gene3D G3DSA:3.40.140.20 383 525 1.4E-61 T 13-09-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 Pfam PF01808 AICARFT/IMPCHase bienzyme 140 466 4.3E-117 T 13-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 PIRSF PIRSF000414 4 535 7.6E-217 T 13-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 Gene3D G3DSA:3.40.50.1380 9 191 1.7E-80 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 10 535 44.798 T 13-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PMA3_RS02535 cfc9cc6715145cca318df3f371e7aa0a 535 PANTHER PTHR11692:SF2 8 535 0.0 T 13-09-2016 PMA3_RS27140 3b8b5738d9a8a0a0e8dd634b2ed496bc 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 13-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27140 3b8b5738d9a8a0a0e8dd634b2ed496bc 128 Gene3D G3DSA:3.90.1030.10 1 117 1.9E-48 T 13-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27140 3b8b5738d9a8a0a0e8dd634b2ed496bc 128 Pfam PF01196 Ribosomal protein L17 20 116 3.5E-33 T 13-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27140 3b8b5738d9a8a0a0e8dd634b2ed496bc 128 PANTHER PTHR14413 1 118 6.4E-62 T 13-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27140 3b8b5738d9a8a0a0e8dd634b2ed496bc 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.7E-45 T 13-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27140 3b8b5738d9a8a0a0e8dd634b2ed496bc 128 SUPERFAMILY SSF64263 1 119 3.14E-49 T 13-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27140 3b8b5738d9a8a0a0e8dd634b2ed496bc 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.527 T 13-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27140 3b8b5738d9a8a0a0e8dd634b2ed496bc 128 PANTHER PTHR14413:SF5 1 118 6.4E-62 T 13-09-2016 PMA3_RS16365 39d7f265231feaa254a792f466437556 497 SUPERFAMILY SSF46626 5 106 2.04E-16 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16365 39d7f265231feaa254a792f466437556 497 Pfam PF02239 Cytochrome D1 heme domain 133 488 7.2E-140 T 13-09-2016 PMA3_RS16365 39d7f265231feaa254a792f466437556 497 Gene3D G3DSA:2.140.10.20 238 484 1.4E-58 T 13-09-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain PMA3_RS16365 39d7f265231feaa254a792f466437556 497 Gene3D G3DSA:2.130.10.10 139 237 8.5E-16 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS16365 39d7f265231feaa254a792f466437556 497 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 24 96 6.3E-11 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16365 39d7f265231feaa254a792f466437556 497 Gene3D G3DSA:1.10.760.10 17 101 1.3E-17 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16365 39d7f265231feaa254a792f466437556 497 SUPERFAMILY SSF51004 106 490 3.66E-86 T 13-09-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PMA3_RS14955 b3eadffb2a1fbbb91e09eb346ca3bf93 355 Gene3D G3DSA:2.40.128.130 116 355 9.0E-37 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS14955 b3eadffb2a1fbbb91e09eb346ca3bf93 355 SUPERFAMILY SSF103515 61 355 2.22E-27 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS14955 b3eadffb2a1fbbb91e09eb346ca3bf93 355 SMART SM00869 79 342 3.7E-15 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS14955 b3eadffb2a1fbbb91e09eb346ca3bf93 355 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 143 355 2.3E-23 T 13-09-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 PMA3_RS14955 b3eadffb2a1fbbb91e09eb346ca3bf93 355 Pfam PF03797 Autotransporter beta-domain 125 335 4.3E-27 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS17300 0b44dd21d26d8345be35eec8af71dcf8 331 SUPERFAMILY SSF53335 90 260 6.78E-29 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS17300 0b44dd21d26d8345be35eec8af71dcf8 331 Gene3D G3DSA:3.40.50.150 117 256 6.6E-29 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS17300 0b44dd21d26d8345be35eec8af71dcf8 331 PANTHER PTHR18895 118 253 6.2E-24 T 13-09-2016 PMA3_RS17300 0b44dd21d26d8345be35eec8af71dcf8 331 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 207 213 - T 13-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PMA3_RS17300 0b44dd21d26d8345be35eec8af71dcf8 331 Pfam PF05175 Methyltransferase small domain 124 253 2.2E-18 T 13-09-2016 IPR007848 Methyltransferase small domain GO:0008168 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 PANTHER PTHR24423 288 432 4.7E-184 T 13-09-2016 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SUPERFAMILY SSF55785 290 413 5.23E-21 T 13-09-2016 IPR000014 PAS domain PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Gene3D G3DSA:3.30.450.20 39 161 2.8E-13 T 13-09-2016 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Pfam PF00512 His Kinase A (phospho-acceptor) domain 472 538 6.1E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 PANTHER PTHR24423:SF438 288 432 4.7E-184 T 13-09-2016 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Pfam PF00072 Response regulator receiver domain 727 837 2.1E-19 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SUPERFAMILY SSF47384 461 537 2.35E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 701 3.6E-16 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SMART SM00448 725 837 3.6E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 PANTHER PTHR24423 467 843 4.7E-184 T 13-09-2016 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SMART SM00388 471 539 2.0E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SUPERFAMILY SSF55785 59 160 6.98E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SMART SM00387 580 703 1.0E-22 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Gene3D G3DSA:3.30.565.10 526 702 2.0E-35 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 226 299 2.3E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 300 424 3.8E-14 T 13-09-2016 IPR000014 PAS domain PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Gene3D G3DSA:3.30.450.20 168 296 1.3E-23 T 13-09-2016 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 PANTHER PTHR24423:SF438 33 146 4.7E-184 T 13-09-2016 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 PANTHER PTHR24423 33 146 4.7E-184 T 13-09-2016 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SUPERFAMILY SSF52172 726 843 1.38E-28 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Gene3D G3DSA:1.10.287.130 465 525 2.6E-6 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SMART SM00086 108 151 5.8 T 13-09-2016 IPR001610 PAC motif PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SMART SM00086 250 292 4.1E-4 T 13-09-2016 IPR001610 PAC motif PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SMART SM00086 375 417 46.0 T 13-09-2016 IPR001610 PAC motif PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 660 2.0E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 687 700 2.0E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 681 2.0E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 646 2.0E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SMART SM00091 174 244 37.0 T 13-09-2016 IPR000014 PAS domain PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SMART SM00091 304 370 9.5E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Pfam PF08447 PAS fold 203 285 9.3E-17 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Pfam PF08448 PAS fold 311 419 3.0E-16 T 13-09-2016 IPR013656 PAS fold-4 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Pfam PF08448 PAS fold 50 153 2.7E-6 T 13-09-2016 IPR013656 PAS fold-4 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SUPERFAMILY SSF55874 530 703 1.96E-37 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 PANTHER PTHR24423:SF438 467 843 4.7E-184 T 13-09-2016 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Gene3D G3DSA:3.30.450.20 297 413 4.3E-20 T 13-09-2016 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 Gene3D G3DSA:3.40.50.2300 724 843 3.4E-32 T 13-09-2016 PMA3_RS12355 58a53ac06fc7a0083b512305679fb706 845 SUPERFAMILY SSF55785 186 293 2.97E-17 T 13-09-2016 IPR000014 PAS domain PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 Gene3D G3DSA:2.40.110.10 121 218 3.4E-39 T 13-09-2016 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 2.8E-42 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 PANTHER PTHR10909:SF325 1 385 6.8E-291 T 13-09-2016 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.6E-23 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 Gene3D G3DSA:1.20.140.10 219 381 1.0E-54 T 13-09-2016 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 SUPERFAMILY SSF47203 229 377 2.74E-42 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 PANTHER PTHR10909 1 385 6.8E-291 T 13-09-2016 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 SUPERFAMILY SSF56645 2 241 2.09E-81 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 1.0E-32 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS07230 07547995bc11761d34d7518bc38c5468 385 Gene3D G3DSA:1.10.540.10 3 119 1.7E-36 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS17095 850413babe8377a1ab0f6d823b1e21ef 552 SUPERFAMILY SSF51905 22 88 3.08E-23 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17095 850413babe8377a1ab0f6d823b1e21ef 552 SUPERFAMILY SSF51905 122 353 3.08E-23 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17095 850413babe8377a1ab0f6d823b1e21ef 552 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 29 513 8.0E-209 T 13-09-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PMA3_RS17095 850413babe8377a1ab0f6d823b1e21ef 552 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 25 515 54.468 T 13-09-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PMA3_RS17095 850413babe8377a1ab0f6d823b1e21ef 552 Gene3D G3DSA:3.50.50.60 170 352 2.7E-19 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17095 850413babe8377a1ab0f6d823b1e21ef 552 Gene3D G3DSA:3.50.50.60 27 95 2.7E-19 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17095 850413babe8377a1ab0f6d823b1e21ef 552 PANTHER PTHR13847 16 425 1.0E-202 T 13-09-2016 PMA3_RS17095 850413babe8377a1ab0f6d823b1e21ef 552 PANTHER PTHR13847:SF214 16 425 1.0E-202 T 13-09-2016 PMA3_RS17095 850413babe8377a1ab0f6d823b1e21ef 552 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 28 515 1.2E-235 T 13-09-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 182 318 9.6E-26 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 13 172 3.2E-36 T 13-09-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 SUPERFAMILY SSF53218 183 327 1.83E-40 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 Gene3D G3DSA:2.170.190.11 55 146 8.8E-25 T 13-09-2016 PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 Gene3D G3DSA:2.40.340.10 338 396 9.7E-8 T 13-09-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 SMART SM00852 185 322 6.7E-38 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 Gene3D G3DSA:3.40.980.10 167 332 1.6E-60 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 PANTHER PTHR10192:SF17 6 410 1.1E-166 T 13-09-2016 PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 PANTHER PTHR10192 6 410 1.1E-166 T 13-09-2016 PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 SUPERFAMILY SSF63882 10 180 6.28E-52 T 13-09-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 Pfam PF00994 Probable molybdopterin binding domain 197 320 2.0E-23 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 395 1.7E-8 T 13-09-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 Gene3D G3DSA:3.90.105.10 34 54 4.7E-19 T 13-09-2016 PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 Gene3D G3DSA:3.90.105.10 147 166 4.7E-19 T 13-09-2016 PMA3_RS16240 c0cda2b2087c849eb5a293d7db5cf348 411 SUPERFAMILY SSF63867 333 403 1.23E-11 T 13-09-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS01365 0e7b419aeced91ac434097380e60c316 92 PANTHER PTHR33162 1 51 2.5E-15 T 13-09-2016 PMA3_RS01365 0e7b419aeced91ac434097380e60c316 92 Pfam PF02416 mttA/Hcf106 family 6 48 6.4E-14 T 13-09-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PMA3_RS01365 0e7b419aeced91ac434097380e60c316 92 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 22.504 T 13-09-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PMA3_RS01365 0e7b419aeced91ac434097380e60c316 92 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 1.6E-22 T 13-09-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PMA3_RS09575 ebbf020ef94b48da655510abe6fe08de 343 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 253 337 8.7E-25 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS09575 ebbf020ef94b48da655510abe6fe08de 343 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 255 319 1.1E-16 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS09575 ebbf020ef94b48da655510abe6fe08de 343 ProSitePatterns PS00211 ABC transporters family signature. 176 190 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS09575 ebbf020ef94b48da655510abe6fe08de 343 PANTHER PTHR24220 28 337 5.3E-130 T 13-09-2016 PMA3_RS09575 ebbf020ef94b48da655510abe6fe08de 343 PANTHER PTHR24220:SF586 28 337 5.3E-130 T 13-09-2016 PMA3_RS09575 ebbf020ef94b48da655510abe6fe08de 343 Pfam PF00005 ABC transporter 47 203 1.7E-22 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS09575 ebbf020ef94b48da655510abe6fe08de 343 Gene3D G3DSA:3.40.50.300 19 281 4.4E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09575 ebbf020ef94b48da655510abe6fe08de 343 SMART SM00382 55 261 7.1E-14 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS09575 ebbf020ef94b48da655510abe6fe08de 343 SUPERFAMILY SSF52540 26 274 6.5E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01690 90822c7dda9922e20db44710c3ad0b19 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 46 140 3.5E-29 T 13-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PMA3_RS01690 90822c7dda9922e20db44710c3ad0b19 144 SUPERFAMILY SSF52833 28 141 4.23E-32 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS01690 90822c7dda9922e20db44710c3ad0b19 144 PRINTS PR00421 Thioredoxin family signature 59 67 2.9E-7 T 13-09-2016 PMA3_RS01690 90822c7dda9922e20db44710c3ad0b19 144 PRINTS PR00421 Thioredoxin family signature 107 118 2.9E-7 T 13-09-2016 PMA3_RS01690 90822c7dda9922e20db44710c3ad0b19 144 PRINTS PR00421 Thioredoxin family signature 67 76 2.9E-7 T 13-09-2016 PMA3_RS01690 90822c7dda9922e20db44710c3ad0b19 144 Gene3D G3DSA:3.40.30.10 42 141 8.9E-30 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS01690 90822c7dda9922e20db44710c3ad0b19 144 PANTHER PTHR10438:SF281 15 143 1.3E-32 T 13-09-2016 PMA3_RS01690 90822c7dda9922e20db44710c3ad0b19 144 PANTHER PTHR10438 15 143 1.3E-32 T 13-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PMA3_RS01690 90822c7dda9922e20db44710c3ad0b19 144 ProSitePatterns PS00194 Thioredoxin family active site. 60 78 - T 13-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PMA3_RS01690 90822c7dda9922e20db44710c3ad0b19 144 Pfam PF00085 Thioredoxin 43 141 6.7E-25 T 13-09-2016 IPR013766 Thioredoxin domain GO:0045454 PMA3_RS08300 42afd814950caa6bb4aaf06304b15eff 181 Gene3D G3DSA:1.20.950.20 87 178 3.1E-4 T 13-09-2016 PMA3_RS08300 42afd814950caa6bb4aaf06304b15eff 181 PANTHER PTHR30529 1 180 1.0E-61 T 13-09-2016 PMA3_RS08300 42afd814950caa6bb4aaf06304b15eff 181 SUPERFAMILY SSF81342 5 179 4.08E-34 T 13-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PMA3_RS08300 42afd814950caa6bb4aaf06304b15eff 181 PANTHER PTHR30529:SF1 1 180 1.0E-61 T 13-09-2016 PMA3_RS08300 42afd814950caa6bb4aaf06304b15eff 181 Pfam PF01292 Prokaryotic cytochrome b561 8 177 8.0E-30 T 13-09-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PMA3_RS15175 c0169c6a71d96a5fad0cc659a3169273 314 PANTHER PTHR33608 10 314 8.7E-117 T 13-09-2016 PMA3_RS15175 c0169c6a71d96a5fad0cc659a3169273 314 Pfam PF01882 Protein of unknown function DUF58 52 136 7.9E-19 T 13-09-2016 IPR002881 Domain of unknown function DUF58 PMA3_RS15175 c0169c6a71d96a5fad0cc659a3169273 314 PANTHER PTHR33608:SF6 10 314 8.7E-117 T 13-09-2016 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 Gene3D G3DSA:3.30.230.10 585 766 2.3E-73 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 698 717 4.6E-54 T 13-09-2016 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 590 606 4.6E-54 T 13-09-2016 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 721 739 4.6E-54 T 13-09-2016 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 668 687 4.6E-54 T 13-09-2016 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 371 4.6E-54 T 13-09-2016 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 Gene3D G3DSA:1.10.8.60 497 579 1.1E-31 T 13-09-2016 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 SMART SM00382 344 488 3.0E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 SUPERFAMILY SSF52540 308 581 2.2E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 197 8.7E-43 T 13-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 SUPERFAMILY SSF54211 590 765 3.07E-57 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 Gene3D G3DSA:3.40.50.300 306 496 3.6E-35 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 SUPERFAMILY SSF88697 6 197 6.21E-50 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 PIRSF PIRSF001174 1 770 0.0 T 13-09-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 PANTHER PTHR10046 5 771 0.0 T 13-09-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 Hamap MF_01973 Lon protease [lon]. 7 767 70.998 T 13-09-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 348 484 1.9E-19 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 SMART SM00464 6 198 4.6E-75 T 13-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 TIGRFAM TIGR00763 lon: endopeptidase La 8 766 4.6E-299 T 13-09-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 PANTHER PTHR10046:SF43 5 771 0.0 T 13-09-2016 PMA3_RS08155 c694a0fdba2bfb90bc9891390f34f16d 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 564 767 8.4E-97 T 13-09-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 SMART SM01231 367 427 1.1E-18 T 13-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 Gene3D G3DSA:3.30.565.10 429 614 5.9E-38 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 Gene3D G3DSA:2.40.50.180 639 701 4.3E-14 T 13-09-2016 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 Gene3D G3DSA:2.30.30.40 615 636 2.3E-23 T 13-09-2016 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 Gene3D G3DSA:2.30.30.40 702 745 2.3E-23 T 13-09-2016 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 SUPERFAMILY SSF55874 430 613 2.88E-39 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 Gene3D G3DSA:1.10.287.560 367 428 1.8E-19 T 13-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 SMART SM00260 607 746 6.9E-42 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 SUPERFAMILY SSF47226 6 128 1.83E-31 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 SUPERFAMILY SSF47384 368 428 4.32E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 SMART SM00073 6 103 1.1E-20 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 PANTHER PTHR22617:SF6 1 753 6.1E-272 T 13-09-2016 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 SMART SM00387 472 615 2.0E-24 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 SUPERFAMILY SSF50341 614 746 6.02E-32 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 368 427 3.0E-13 T 13-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 Pfam PF01584 CheW-like domain 621 748 1.8E-24 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 614 6.3E-18 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 Pfam PF01627 Hpt domain 8 100 1.2E-18 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 Gene3D G3DSA:1.20.120.160 6 143 9.0E-44 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 569 2.4E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 2.4E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 612 2.4E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 593 2.4E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21590 4f22681e6c6f74b2816b0c435103168c 754 PANTHER PTHR22617 1 753 6.1E-272 T 13-09-2016 PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 Gene3D G3DSA:3.40.50.300 265 489 3.3E-50 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 PANTHER PTHR24220 15 388 6.4E-172 T 13-09-2016 PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 PANTHER PTHR24220:SF416 15 388 6.4E-172 T 13-09-2016 PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 Pfam PF00005 ABC transporter 29 177 1.8E-29 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 Pfam PF00005 ABC transporter 280 434 9.1E-23 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 Gene3D G3DSA:3.40.50.300 12 242 4.6E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 SUPERFAMILY SSF52540 13 237 5.22E-58 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 SUPERFAMILY SSF52540 266 486 1.55E-47 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 SMART SM00382 288 482 2.8E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS18195 1a54b200b97a8686f24528f81e2d0ef1 519 SMART SM00382 38 226 2.6E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS10065 e86f24053999b6162670c8d9b913096a 260 SUPERFAMILY SSF48179 157 243 3.74E-6 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS10065 e86f24053999b6162670c8d9b913096a 260 Gene3D G3DSA:3.40.50.720 4 133 4.1E-22 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10065 e86f24053999b6162670c8d9b913096a 260 PANTHER PTHR11645 2 234 1.2E-16 T 13-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PMA3_RS10065 e86f24053999b6162670c8d9b913096a 260 SUPERFAMILY SSF51735 4 129 3.15E-16 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10065 e86f24053999b6162670c8d9b913096a 260 Gene3D G3DSA:1.10.3730.10 157 239 3.1E-6 T 13-09-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PMA3_RS10065 e86f24053999b6162670c8d9b913096a 260 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 93 3.5E-10 T 13-09-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PMA3_RS10065 e86f24053999b6162670c8d9b913096a 260 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 157 239 2.8E-7 T 13-09-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PMA3_RS10065 e86f24053999b6162670c8d9b913096a 260 PANTHER PTHR11645:SF0 2 234 1.2E-16 T 13-09-2016 PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 790 807 - T 13-09-2016 IPR010917 TonB-dependent receptor, conserved site PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 PANTHER PTHR32552:SF14 155 807 1.8E-176 T 13-09-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 PANTHER PTHR32552 155 807 1.8E-176 T 13-09-2016 PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 Pfam PF07715 TonB-dependent Receptor Plug Domain 164 255 1.0E-14 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 Gene3D G3DSA:2.40.170.20 280 807 3.9E-104 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 Gene3D G3DSA:2.170.130.10 159 276 1.4E-24 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 165 807 1.1E-111 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 SUPERFAMILY SSF56935 159 807 5.76E-109 T 13-09-2016 PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 SMART SM00965 68 119 1.8E-15 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 Pfam PF00593 TonB dependent receptor 567 805 2.2E-27 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS09120 7e0d358e82601700d20a8abbda7430c8 807 Pfam PF07660 Secretin and TonB N terminus short domain 68 118 2.6E-9 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 SUPERFAMILY SSF48008 92 229 7.06E-26 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 Gene3D G3DSA:1.20.120.530 92 230 8.8E-28 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 Pfam PF07729 FCD domain 97 222 9.6E-24 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 SUPERFAMILY SSF46785 1 77 9.31E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.5E-10 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.5E-10 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 1.0E-22 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 SMART SM00895 97 223 8.5E-20 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 Gene3D G3DSA:1.10.10.10 6 75 1.4E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 SMART SM00345 14 73 2.1E-21 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14395 d0abd71a13afcdf21f50a2231889d39e 232 PANTHER PTHR11751 11 113 1.1E-25 T 13-09-2016 PMA3_RS00945 747faf9c2ec0be290900d16f9077308e 374 SUPERFAMILY SSF140931 99 282 9.16E-32 T 13-09-2016 IPR003812 Fido domain PMA3_RS00945 747faf9c2ec0be290900d16f9077308e 374 Pfam PF13784 Fic/DOC family N-terminal 32 112 1.9E-23 T 13-09-2016 IPR025758 Fic/DOC N-terminal PMA3_RS00945 747faf9c2ec0be290900d16f9077308e 374 PIRSF PIRSF038925 7 365 5.9E-113 T 13-09-2016 IPR026287 Adenosine monophosphate-protein transferase PMA3_RS00945 747faf9c2ec0be290900d16f9077308e 374 Pfam PF02661 Fic/DOC family 151 218 2.1E-16 T 13-09-2016 IPR003812 Fido domain PMA3_RS00945 747faf9c2ec0be290900d16f9077308e 374 Gene3D G3DSA:1.10.3290.10 34 287 1.3E-49 T 13-09-2016 IPR003812 Fido domain PMA3_RS00945 747faf9c2ec0be290900d16f9077308e 374 PANTHER PTHR13504:SF35 13 371 1.2E-201 T 13-09-2016 PMA3_RS00945 747faf9c2ec0be290900d16f9077308e 374 PANTHER PTHR13504 13 371 1.2E-201 T 13-09-2016 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PANTHER PTHR10992 18 173 5.0E-83 T 13-09-2016 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PANTHER PTHR10992 216 329 5.0E-83 T 13-09-2016 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 9.7E-5 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 9.7E-5 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 Gene3D G3DSA:3.40.50.1820 7 330 2.9E-79 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 SUPERFAMILY SSF53474 11 191 3.21E-70 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 SUPERFAMILY SSF53474 220 329 3.21E-70 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 Pfam PF00561 alpha/beta hydrolase fold 33 315 1.6E-20 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PRINTS PR00412 Epoxide hydrolase signature 105 118 6.0E-21 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PRINTS PR00412 Epoxide hydrolase signature 304 326 6.0E-21 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PRINTS PR00412 Epoxide hydrolase signature 119 132 6.0E-21 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PRINTS PR00412 Epoxide hydrolase signature 59 74 6.0E-21 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PRINTS PR00412 Epoxide hydrolase signature 39 57 6.0E-21 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PRINTS PR00412 Epoxide hydrolase signature 266 282 6.0E-21 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PANTHER PTHR10992:SF305 18 173 5.0E-83 T 13-09-2016 PMA3_RS18480 bf01ed458360cfae2bc7482169d87ddf 345 PANTHER PTHR10992:SF305 216 329 5.0E-83 T 13-09-2016 PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 SMART SM00260 17 153 1.9E-19 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 PANTHER PTHR22617 1 169 1.3E-92 T 13-09-2016 PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 Gene3D G3DSA:2.30.30.40 90 144 7.9E-7 T 13-09-2016 PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 Gene3D G3DSA:3.40.50.2300 179 301 1.3E-28 T 13-09-2016 PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 PANTHER PTHR22617:SF30 1 169 1.3E-92 T 13-09-2016 PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 SUPERFAMILY SSF52172 179 302 6.83E-25 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 SUPERFAMILY SSF50341 16 156 4.05E-35 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 Pfam PF00072 Response regulator receiver domain 181 300 3.7E-18 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 SMART SM00448 179 300 2.9E-18 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 PIRSF PIRSF002867 1 308 8.7E-106 T 13-09-2016 IPR024181 Chemotaxis response regulator CheV PMA3_RS05790 ce39fd43cb12e5375b1c8e04b0fbe673 310 Pfam PF01584 CheW-like domain 21 156 1.6E-34 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 SUPERFAMILY SSF82693 140 185 1.73E-13 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 SUPERFAMILY SSF82693 271 326 1.73E-13 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 Gene3D G3DSA:3.30.2090.10 189 270 5.4E-13 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 Gene3D G3DSA:3.30.70.1430 559 602 1.4E-4 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 Gene3D G3DSA:3.30.2090.10 708 792 1.3E-13 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 4.2E-18 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 4.2E-18 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 4.2E-18 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 4.2E-18 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 4.2E-18 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 PANTHER PTHR32063:SF18 4 1020 0.0 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 SUPERFAMILY SSF82693 43 137 5.93E-15 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 Gene3D G3DSA:1.10.3850.10 800 1012 8.3E-50 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 Gene3D G3DSA:1.10.3850.10 277 489 2.5E-40 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 SUPERFAMILY SSF82714 708 792 1.31E-13 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 SUPERFAMILY SSF82714 188 269 1.31E-13 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 Pfam PF00873 AcrB/AcrD/AcrF family 7 1009 5.9E-146 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 SUPERFAMILY SSF82693 555 633 2.09E-6 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 PANTHER PTHR32063 4 1020 0.0 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 Gene3D G3DSA:3.30.70.1430 43 146 2.0E-17 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 SUPERFAMILY SSF82866 297 491 2.49E-35 T 13-09-2016 PMA3_RS08885 010b8a5a111e4f978a624a652e2b0fc4 1028 SUPERFAMILY SSF82866 792 1015 5.1E-43 T 13-09-2016 PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 Gene3D G3DSA:3.40.50.720 11 260 1.1E-74 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.6E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.6E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.6E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 SUPERFAMILY SSF51735 14 257 4.2E-72 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.8E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.8E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.8E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.8E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.8E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.8E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 257 1.8E-57 T 13-09-2016 PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PANTHER PTHR24322 17 142 1.6E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10105 a27bce5fbb8259062473ddee058bc0bc 262 PANTHER PTHR24322 158 194 1.6E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13295 fab4b4cbecf090990455f72085557f8b 307 Gene3D G3DSA:1.10.10.10 8 86 1.4E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13295 fab4b4cbecf090990455f72085557f8b 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 9.8E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13295 fab4b4cbecf090990455f72085557f8b 307 Gene3D G3DSA:3.40.190.10 185 267 1.2E-15 T 13-09-2016 PMA3_RS13295 fab4b4cbecf090990455f72085557f8b 307 PANTHER PTHR30537 1 301 2.1E-87 T 13-09-2016 PMA3_RS13295 fab4b4cbecf090990455f72085557f8b 307 SUPERFAMILY SSF46785 8 90 3.03E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13295 fab4b4cbecf090990455f72085557f8b 307 PANTHER PTHR30537:SF29 1 301 2.1E-87 T 13-09-2016 PMA3_RS13295 fab4b4cbecf090990455f72085557f8b 307 Gene3D G3DSA:3.40.190.10 97 184 5.0E-18 T 13-09-2016 PMA3_RS13295 fab4b4cbecf090990455f72085557f8b 307 SUPERFAMILY SSF53850 93 301 9.23E-37 T 13-09-2016 PMA3_RS13295 fab4b4cbecf090990455f72085557f8b 307 Pfam PF03466 LysR substrate binding domain 93 299 1.5E-35 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS07355 301fe3f1adcb45766c456052c4c113fe 399 PANTHER PTHR34219:SF3 3 383 8.7E-105 T 13-09-2016 PMA3_RS07355 301fe3f1adcb45766c456052c4c113fe 399 PANTHER PTHR34219 3 383 8.7E-105 T 13-09-2016 PMA3_RS07355 301fe3f1adcb45766c456052c4c113fe 399 Pfam PF03929 PepSY-associated TM region 12 366 1.2E-51 T 13-09-2016 IPR005625 PepSY-associated TM protein PMA3_RS07355 301fe3f1adcb45766c456052c4c113fe 399 Pfam PF03413 Peptidase propeptide and YPEB domain 61 116 1.0E-6 T 13-09-2016 IPR025711 PepSY domain PMA3_RS04385 5327eb3b9338f03f37682ca2731ceda9 227 PANTHER PTHR33991 3 225 3.8E-43 T 13-09-2016 PMA3_RS04385 5327eb3b9338f03f37682ca2731ceda9 227 SUPERFAMILY SSF57863 85 142 8.11E-9 T 13-09-2016 PMA3_RS04385 5327eb3b9338f03f37682ca2731ceda9 227 Hamap MF_00201 DNA repair protein RecO [recO]. 3 227 18.096 T 13-09-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PMA3_RS04385 5327eb3b9338f03f37682ca2731ceda9 227 Pfam PF02565 Recombination protein O C terminal 82 222 3.3E-22 T 13-09-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PMA3_RS04385 5327eb3b9338f03f37682ca2731ceda9 227 SUPERFAMILY SSF50249 5 73 7.71E-11 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS04385 5327eb3b9338f03f37682ca2731ceda9 227 Gene3D G3DSA:2.40.50.140 8 72 3.6E-5 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS04385 5327eb3b9338f03f37682ca2731ceda9 227 TIGRFAM TIGR00613 reco: DNA repair protein RecO 9 145 4.4E-17 T 13-09-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PMA3_RS04385 5327eb3b9338f03f37682ca2731ceda9 227 Pfam PF11967 Recombination protein O N terminal 6 72 6.8E-14 T 13-09-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal PMA3_RS29175 e7053ded4bc2d25631927723cad2e15b 632 Pfam PF03239 Iron permease FTR1 family 368 477 2.7E-12 T 13-09-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 PMA3_RS29175 e7053ded4bc2d25631927723cad2e15b 632 PANTHER PTHR31632 364 597 1.1E-36 T 13-09-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 PMA3_RS29175 e7053ded4bc2d25631927723cad2e15b 632 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 132 215 1.3E-12 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS29175 e7053ded4bc2d25631927723cad2e15b 632 SUPERFAMILY SSF46626 114 224 8.89E-21 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS29175 e7053ded4bc2d25631927723cad2e15b 632 PANTHER PTHR31632:SF4 364 597 1.1E-36 T 13-09-2016 PMA3_RS29175 e7053ded4bc2d25631927723cad2e15b 632 Gene3D G3DSA:1.10.760.10 121 223 5.2E-19 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 SUPERFAMILY SSF55874 462 586 2.62E-16 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 PANTHER PTHR24421:SF25 386 587 1.1E-83 T 13-09-2016 PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 PANTHER PTHR24421 386 587 1.1E-83 T 13-09-2016 PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 SUPERFAMILY SSF158472 180 228 1.57E-10 T 13-09-2016 PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 Pfam PF07730 Histidine kinase 391 456 3.7E-15 T 13-09-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 131 1.7E-11 T 13-09-2016 IPR029095 NarX-like, N-terminal PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 587 9.8E-9 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 Gene3D G3DSA:3.30.565.10 448 457 3.7E-10 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 Gene3D G3DSA:3.30.565.10 495 586 3.7E-10 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 SMART SM00304 179 231 3.9E-13 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 Pfam PF00672 HAMP domain 161 227 2.2E-14 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 PANTHER PTHR24421:SF25 1 290 1.1E-83 T 13-09-2016 PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 PANTHER PTHR24421 1 290 1.1E-83 T 13-09-2016 PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 SMART SM00387 497 590 6.3E-4 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS16205 dd62f14d515b19bf612dbdafdd1fcbaf 600 PIRSF PIRSF003167 1 600 8.3E-196 T 13-09-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799:SF712 766 1094 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 SUPERFAMILY SSF52540 682 737 4.95E-33 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 SUPERFAMILY SSF52540 768 854 4.95E-33 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 SUPERFAMILY SSF52540 270 409 4.95E-33 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799 533 568 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799 223 442 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799 473 495 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 Pfam PF00271 Helicase conserved C-terminal domain 715 841 5.4E-12 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 Pfam PF00176 SNF2 family N-terminal domain 259 415 3.5E-12 T 13-09-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799:SF712 533 568 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799:SF712 223 442 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 Gene3D G3DSA:3.40.50.300 779 867 5.2E-24 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 Gene3D G3DSA:3.40.50.300 693 747 5.2E-24 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799 148 155 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799 766 1094 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 SMART SM00490 729 841 3.9E-8 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 Gene3D G3DSA:3.40.50.300 248 418 6.8E-21 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 SMART SM00487 247 434 6.6E-10 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799:SF712 148 155 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799:SF712 473 495 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799 83 116 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799 650 735 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799:SF712 83 116 1.2E-119 T 13-09-2016 PMA3_RS26845 97e3ac61a35fded3a930af963299b5a2 1096 PANTHER PTHR10799:SF712 650 735 1.2E-119 T 13-09-2016 PMA3_RS29735 d45bf75e7ae56627ba111196612794ab 81 PANTHER PTHR33884:SF1 1 81 1.2E-27 T 13-09-2016 PMA3_RS29735 d45bf75e7ae56627ba111196612794ab 81 Pfam PF04226 Transglycosylase associated protein 33 80 7.9E-12 T 13-09-2016 IPR007341 Transglycosylase-associated protein GO:0016021 PMA3_RS29735 d45bf75e7ae56627ba111196612794ab 81 PANTHER PTHR33884 1 81 1.2E-27 T 13-09-2016 PMA3_RS15620 dd87604ee50fbcd990d1425401e5ba4b 175 PANTHER PTHR35011:SF2 3 163 1.6E-32 T 13-09-2016 PMA3_RS15620 dd87604ee50fbcd990d1425401e5ba4b 175 PANTHER PTHR35011 3 163 1.6E-32 T 13-09-2016 PMA3_RS15620 dd87604ee50fbcd990d1425401e5ba4b 175 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 153 1.1E-22 T 13-09-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PMA3_RS17500 b5f80e3e117d0afa4383b9f599eb1f16 823 PANTHER PTHR30489 216 819 1.6E-179 T 13-09-2016 PMA3_RS17500 b5f80e3e117d0afa4383b9f599eb1f16 823 PANTHER PTHR30489 8 188 1.6E-179 T 13-09-2016 PMA3_RS17500 b5f80e3e117d0afa4383b9f599eb1f16 823 Pfam PF02687 FtsX-like permease family 695 812 6.9E-14 T 13-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PMA3_RS17500 b5f80e3e117d0afa4383b9f599eb1f16 823 Pfam PF02687 FtsX-like permease family 245 367 7.4E-10 T 13-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PMA3_RS17500 b5f80e3e117d0afa4383b9f599eb1f16 823 PANTHER PTHR30489:SF6 216 819 1.6E-179 T 13-09-2016 PMA3_RS17500 b5f80e3e117d0afa4383b9f599eb1f16 823 PANTHER PTHR30489:SF6 8 188 1.6E-179 T 13-09-2016 PMA3_RS17500 b5f80e3e117d0afa4383b9f599eb1f16 823 Pfam PF12704 MacB-like periplasmic core domain 464 626 5.3E-9 T 13-09-2016 IPR025857 MacB-like periplasmic core domain PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PANTHER PTHR24322:SF635 10 138 1.7E-71 T 13-09-2016 PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PANTHER PTHR24322:SF635 154 186 1.7E-71 T 13-09-2016 PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 4.9E-5 T 13-09-2016 PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PANTHER PTHR24322 10 138 1.7E-71 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PANTHER PTHR24322 154 186 1.7E-71 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.5E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.5E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 SUPERFAMILY SSF51735 4 246 3.59E-83 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.1E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.1E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.1E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.1E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.1E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.1E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 3.3E-64 T 13-09-2016 PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 Gene3D G3DSA:3.40.50.720 2 246 2.9E-87 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 1.4E-99 T 13-09-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PMA3_RS06255 9e67a73ca53ab8d0dbe4adb66d2db957 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS25325 8c466df4011304776e0cb0d26d081775 322 Pfam PF00005 ABC transporter 23 180 3.9E-28 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS25325 8c466df4011304776e0cb0d26d081775 322 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS25325 8c466df4011304776e0cb0d26d081775 322 PANTHER PTHR24220 5 321 1.1E-182 T 13-09-2016 PMA3_RS25325 8c466df4011304776e0cb0d26d081775 322 PANTHER PTHR24220:SF576 5 321 1.1E-182 T 13-09-2016 PMA3_RS25325 8c466df4011304776e0cb0d26d081775 322 SMART SM00382 31 230 7.6E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25325 8c466df4011304776e0cb0d26d081775 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 1.6E-14 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS25325 8c466df4011304776e0cb0d26d081775 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 314 2.2E-20 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS25325 8c466df4011304776e0cb0d26d081775 322 Gene3D G3DSA:3.40.50.300 3 258 2.4E-73 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25325 8c466df4011304776e0cb0d26d081775 322 SUPERFAMILY SSF52540 3 251 1.04E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 Pfam PF00563 EAL domain 553 792 3.9E-62 T 13-09-2016 IPR001633 EAL domain PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 Gene3D G3DSA:3.30.450.20 240 361 4.2E-18 T 13-09-2016 PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 Gene3D G3DSA:3.30.70.270 375 538 1.2E-54 T 13-09-2016 PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 251 366 1.3E-12 T 13-09-2016 IPR000014 PAS domain PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 SUPERFAMILY SSF55073 379 536 3.14E-49 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 Pfam PF00989 PAS fold 251 360 5.1E-11 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 Gene3D G3DSA:3.20.20.450 551 795 1.0E-73 T 13-09-2016 IPR001633 EAL domain PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 SMART SM00052 547 797 4.0E-60 T 13-09-2016 IPR001633 EAL domain PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 SMART SM00091 245 313 1.5E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 PANTHER PTHR33121:SF10 549 794 1.3E-58 T 13-09-2016 PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 534 2.3E-42 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 531 4.3E-46 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 SUPERFAMILY SSF55785 232 361 3.66E-16 T 13-09-2016 IPR000014 PAS domain PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 SUPERFAMILY SSF141868 553 795 1.12E-69 T 13-09-2016 IPR001633 EAL domain PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 PANTHER PTHR33121 549 794 1.3E-58 T 13-09-2016 PMA3_RS06940 b801d05fa6938e0446b94a537aaaddfe 819 SMART SM00267 363 535 2.4E-63 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 Pfam PF02985 HEAT repeat 200 225 1.2E-4 T 13-09-2016 IPR000357 HEAT repeat GO:0005515 PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 PANTHER PTHR12697 16 319 5.7E-35 T 13-09-2016 PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 Gene3D G3DSA:1.25.10.10 53 319 4.7E-58 T 13-09-2016 IPR011989 Armadillo-like helical PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 Pfam PF13646 HEAT repeats 233 316 7.9E-14 T 13-09-2016 PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 Pfam PF13646 HEAT repeats 16 98 9.2E-13 T 13-09-2016 PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 Pfam PF13646 HEAT repeats 115 193 3.6E-15 T 13-09-2016 PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 SMART SM00567 E-Z type HEAT repeats 119 148 2.3 T 13-09-2016 IPR004155 PBS lyase HEAT-like repeat PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 SMART SM00567 E-Z type HEAT repeats 150 179 0.0021 T 13-09-2016 IPR004155 PBS lyase HEAT-like repeat PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 SMART SM00567 E-Z type HEAT repeats 182 211 12.0 T 13-09-2016 IPR004155 PBS lyase HEAT-like repeat PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 SMART SM00567 E-Z type HEAT repeats 25 54 200.0 T 13-09-2016 IPR004155 PBS lyase HEAT-like repeat PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 SMART SM00567 E-Z type HEAT repeats 57 86 0.0019 T 13-09-2016 IPR004155 PBS lyase HEAT-like repeat PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 SMART SM00567 E-Z type HEAT repeats 275 304 0.11 T 13-09-2016 IPR004155 PBS lyase HEAT-like repeat PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 SMART SM00567 E-Z type HEAT repeats 213 242 2.1E-7 T 13-09-2016 IPR004155 PBS lyase HEAT-like repeat PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 SMART SM00567 E-Z type HEAT repeats 244 273 0.094 T 13-09-2016 IPR004155 PBS lyase HEAT-like repeat PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 PANTHER PTHR12697:SF18 16 319 5.7E-35 T 13-09-2016 PMA3_RS12045 dfa8aaa2672625a4a38cefd1996f59dd 320 SUPERFAMILY SSF48371 62 312 5.12E-52 T 13-09-2016 IPR016024 Armadillo-type fold GO:0005488 PMA3_RS12185 edbac54346c3ac729d86dd7b4797d651 615 Gene3D G3DSA:3.20.20.140 206 475 1.2E-17 T 13-09-2016 PMA3_RS12185 edbac54346c3ac729d86dd7b4797d651 615 SUPERFAMILY SSF51338 494 540 2.85E-25 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS12185 edbac54346c3ac729d86dd7b4797d651 615 SUPERFAMILY SSF51338 3 65 2.85E-25 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS12185 edbac54346c3ac729d86dd7b4797d651 615 Gene3D G3DSA:2.30.40.10 3 111 3.7E-18 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS12185 edbac54346c3ac729d86dd7b4797d651 615 PANTHER PTHR22642 6 554 1.8E-168 T 13-09-2016 PMA3_RS12185 edbac54346c3ac729d86dd7b4797d651 615 Pfam PF07969 Amidohydrolase family 53 535 8.8E-118 T 13-09-2016 IPR013108 Amidohydrolase 3 PMA3_RS12185 edbac54346c3ac729d86dd7b4797d651 615 Gene3D G3DSA:3.20.20.140 476 535 5.4E-4 T 13-09-2016 PMA3_RS12185 edbac54346c3ac729d86dd7b4797d651 615 PANTHER PTHR22642:SF2 6 554 1.8E-168 T 13-09-2016 PMA3_RS12185 edbac54346c3ac729d86dd7b4797d651 615 SUPERFAMILY SSF51556 64 126 3.89E-43 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS12185 edbac54346c3ac729d86dd7b4797d651 615 SUPERFAMILY SSF51556 206 494 3.89E-43 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS25300 8c947e707aaa733263d75d46023b0e1c 533 Gene3D G3DSA:3.10.105.10 291 502 1.9E-67 T 13-09-2016 PMA3_RS25300 8c947e707aaa733263d75d46023b0e1c 533 PIRSF PIRSF002741 6 529 8.8E-115 T 13-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PMA3_RS25300 8c947e707aaa733263d75d46023b0e1c 533 SUPERFAMILY SSF53850 28 531 2.76E-145 T 13-09-2016 PMA3_RS25300 8c947e707aaa733263d75d46023b0e1c 533 PANTHER PTHR30290:SF14 1 533 2.7E-200 T 13-09-2016 PMA3_RS25300 8c947e707aaa733263d75d46023b0e1c 533 PANTHER PTHR30290 1 533 2.7E-200 T 13-09-2016 PMA3_RS25300 8c947e707aaa733263d75d46023b0e1c 533 Gene3D G3DSA:3.90.76.10 37 216 2.6E-45 T 13-09-2016 PMA3_RS25300 8c947e707aaa733263d75d46023b0e1c 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 452 2.5E-96 T 13-09-2016 IPR000914 Solute-binding protein family 5 domain PMA3_RS27720 51ce2ddcb816261868439c8cef3393b2 250 PANTHER PTHR40279:SF2 6 249 1.0E-149 T 13-09-2016 PMA3_RS27720 51ce2ddcb816261868439c8cef3393b2 250 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 6 240 5.4E-127 T 13-09-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 PMA3_RS27720 51ce2ddcb816261868439c8cef3393b2 250 SUPERFAMILY SSF48613 1 248 1.33E-81 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS27720 51ce2ddcb816261868439c8cef3393b2 250 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 250 141.266 T 13-09-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 PMA3_RS27720 51ce2ddcb816261868439c8cef3393b2 250 Gene3D G3DSA:1.20.910.10 3 249 8.7E-124 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS27720 51ce2ddcb816261868439c8cef3393b2 250 PANTHER PTHR40279 6 249 1.0E-149 T 13-09-2016 PMA3_RS27720 51ce2ddcb816261868439c8cef3393b2 250 Pfam PF03070 TENA/THI-4/PQQC family 13 222 2.5E-63 T 13-09-2016 IPR004305 Thiaminase-2/PQQC PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 Gene3D G3DSA:1.10.1200.10 671 751 6.6E-19 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 Gene3D G3DSA:2.30.38.10 485 558 1.5E-19 T 13-09-2016 PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 204 596 7.2E-106 T 13-09-2016 IPR010071 Amino acid adenylation domain PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 SMART SM00823 Phosphopantetheine attachment site 680 751 1.6E-4 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 Gene3D G3DSA:3.40.50.980 179 341 1.2E-27 T 13-09-2016 PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 Pfam PF00550 Phosphopantetheine attachment site 683 747 1.7E-15 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 PANTHER PTHR24095 200 1101 1.7E-132 T 13-09-2016 PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 Pfam PF00501 AMP-binding enzyme 189 572 2.7E-71 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 SUPERFAMILY SSF56801 175 692 8.37E-116 T 13-09-2016 PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 Pfam PF07993 Male sterility protein 786 1022 2.6E-49 T 13-09-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 Gene3D G3DSA:3.40.50.980 343 484 2.0E-36 T 13-09-2016 PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 Gene3D G3DSA:3.40.50.720 783 1072 5.4E-37 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 783 1139 8.7E-100 T 13-09-2016 IPR010080 Thioester reductase-like domain PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 SUPERFAMILY SSF51735 783 1079 3.78E-33 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 Gene3D G3DSA:3.30.300.30 566 663 2.0E-23 T 13-09-2016 PMA3_RS00310 41f79c03546a6442263644ded316c16d 1139 SUPERFAMILY SSF47336 676 754 1.57E-16 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 13-09-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 Gene3D G3DSA:3.40.50.300 4 206 6.4E-77 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 PANTHER PTHR24031:SF261 8 480 3.4E-196 T 13-09-2016 PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 PANTHER PTHR24031:SF261 510 557 3.4E-196 T 13-09-2016 PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 SUPERFAMILY SSF52540 74 361 2.78E-71 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 Pfam PF00270 DEAD/DEAH box helicase 31 195 2.3E-48 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 Pfam PF03880 DbpA RNA binding domain 484 552 5.1E-18 T 13-09-2016 IPR005580 DbpA, RNA-binding domain PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 PANTHER PTHR24031 8 480 3.4E-196 T 13-09-2016 PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 PANTHER PTHR24031 510 557 3.4E-196 T 13-09-2016 PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 SMART SM00490 259 340 5.1E-32 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 554 41.696 T 13-09-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 Gene3D G3DSA:3.40.50.300 207 374 3.6E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.4E-28 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS07735 6eb3a3f926a639c86a79a784f18cae9e 557 SMART SM00487 25 223 1.8E-60 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS17640 6e613fa2b6e253b581f7cd25c08faa83 317 SUPERFAMILY SSF54534 161 268 9.16E-30 T 13-09-2016 PMA3_RS17640 6e613fa2b6e253b581f7cd25c08faa83 317 Pfam PF13624 SurA N-terminal domain 8 139 2.7E-18 T 13-09-2016 PMA3_RS17640 6e613fa2b6e253b581f7cd25c08faa83 317 Pfam PF13616 PPIC-type PPIASE domain 165 270 4.0E-24 T 13-09-2016 PMA3_RS17640 6e613fa2b6e253b581f7cd25c08faa83 317 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 209 229 - T 13-09-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PMA3_RS17640 6e613fa2b6e253b581f7cd25c08faa83 317 PANTHER PTHR10657 1 315 1.3E-52 T 13-09-2016 PMA3_RS17640 6e613fa2b6e253b581f7cd25c08faa83 317 SUPERFAMILY SSF109998 24 198 1.41E-31 T 13-09-2016 IPR027304 Trigger factor/SurA domain PMA3_RS17640 6e613fa2b6e253b581f7cd25c08faa83 317 Gene3D G3DSA:3.10.50.40 161 293 4.1E-38 T 13-09-2016 PMA3_RS09115 7a0b339826f15f6ad94fb7fd17660dfa 317 PANTHER PTHR30273:SF3 8 314 1.7E-77 T 13-09-2016 PMA3_RS09115 7a0b339826f15f6ad94fb7fd17660dfa 317 PANTHER PTHR30273 8 314 1.7E-77 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS09115 7a0b339826f15f6ad94fb7fd17660dfa 317 PIRSF PIRSF018266 5 313 1.0E-77 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS09115 7a0b339826f15f6ad94fb7fd17660dfa 317 Pfam PF16220 Domain of unknown function (DUF4880) 16 58 6.5E-12 T 13-09-2016 IPR032623 FecR, N-terminal PMA3_RS09115 7a0b339826f15f6ad94fb7fd17660dfa 317 Pfam PF04773 FecR protein 113 201 2.5E-14 T 13-09-2016 IPR006860 FecR protein PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 PRINTS PR01755 Bacterial translocase SecF protein signature 144 158 1.5E-31 T 13-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 1.5E-31 T 13-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 PRINTS PR01755 Bacterial translocase SecF protein signature 192 210 1.5E-31 T 13-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 PRINTS PR01755 Bacterial translocase SecF protein signature 224 239 1.5E-31 T 13-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 SUPERFAMILY SSF82866 85 283 9.55E-37 T 13-09-2016 PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 Gene3D G3DSA:1.20.1640.10 97 283 8.6E-25 T 13-09-2016 PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 5 287 27.545 T 13-09-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 PANTHER PTHR30081 3 295 4.4E-79 T 13-09-2016 PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 Pfam PF02355 Protein export membrane protein 109 284 1.3E-63 T 13-09-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 90 273 6.8E-56 T 13-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 Pfam PF07549 SecD/SecF GG Motif 27 54 1.5E-11 T 13-09-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PMA3_RS24300 f1ee09a8a476604426630e9a67f06174 304 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 33 276 2.1E-79 T 13-09-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 Pfam PF00005 ABC transporter 21 163 1.1E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 SMART SM00382 30 221 2.4E-14 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 Pfam PF03459 TOBE domain 303 355 1.3E-8 T 13-09-2016 IPR005116 Transport-associated OB, type 1 PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 Gene3D G3DSA:3.40.50.300 3 236 2.9E-77 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 Gene3D G3DSA:2.40.50.140 289 350 6.3E-13 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 PANTHER PTHR24220:SF446 5 293 9.4E-190 T 13-09-2016 PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 Gene3D G3DSA:2.40.50.100 351 365 4.0E-9 T 13-09-2016 PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 Gene3D G3DSA:2.40.50.100 241 288 4.0E-9 T 13-09-2016 PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 SUPERFAMILY SSF50331 238 365 1.02E-27 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 PANTHER PTHR24220 5 293 9.4E-190 T 13-09-2016 PMA3_RS23080 1168f82ebbbb21304c201567b455e390 386 SUPERFAMILY SSF52540 4 245 2.74E-85 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19355 094d629a656a9319a57d8ef66e069389 505 Gene3D G3DSA:3.40.309.10 282 465 1.4E-63 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS19355 094d629a656a9319a57d8ef66e069389 505 Pfam PF00171 Aldehyde dehydrogenase family 36 491 8.0E-167 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS19355 094d629a656a9319a57d8ef66e069389 505 PANTHER PTHR11699 1 504 0.0 T 13-09-2016 PMA3_RS19355 094d629a656a9319a57d8ef66e069389 505 SUPERFAMILY SSF53720 19 495 8.77E-162 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS19355 094d629a656a9319a57d8ef66e069389 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS19355 094d629a656a9319a57d8ef66e069389 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS19355 094d629a656a9319a57d8ef66e069389 505 Gene3D G3DSA:3.40.605.10 22 281 2.2E-97 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS19355 094d629a656a9319a57d8ef66e069389 505 PANTHER PTHR11699:SF174 1 504 0.0 T 13-09-2016 PMA3_RS07305 0929c1c19a26a532f06ba3f9e60bc8bd 173 Pfam PF13673 Acetyltransferase (GNAT) domain 37 155 6.9E-17 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS07305 0929c1c19a26a532f06ba3f9e60bc8bd 173 SUPERFAMILY SSF55729 4 154 1.64E-20 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS07305 0929c1c19a26a532f06ba3f9e60bc8bd 173 Gene3D G3DSA:3.40.630.30 3 162 1.6E-22 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS13045 07f13fc8ea843fe3b361f7af162fd4be 146 Gene3D G3DSA:3.30.450.20 44 114 7.1E-6 T 13-09-2016 PMA3_RS13045 07f13fc8ea843fe3b361f7af162fd4be 146 Pfam PF08670 MEKHLA domain 3 135 1.3E-35 T 13-09-2016 IPR013978 MEKHLA PMA3_RS13045 07f13fc8ea843fe3b361f7af162fd4be 146 SUPERFAMILY SSF55785 24 115 5.33E-8 T 13-09-2016 IPR000014 PAS domain PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.2E-41 T 13-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.2E-41 T 13-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.2E-41 T 13-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 PANTHER PTHR10986:SF12 2 117 3.4E-66 T 13-09-2016 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 SUPERFAMILY SSF74731 3 116 3.79E-50 T 13-09-2016 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 7.0E-22 T 13-09-2016 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 Gene3D G3DSA:1.10.1900.20 55 117 9.9E-31 T 13-09-2016 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.126 T 13-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 PANTHER PTHR10986 2 117 3.4E-66 T 13-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.1E-51 T 13-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PMA3_RS09370 967c466f49b7ce93093d423677fc08cb 118 Pfam PF00453 Ribosomal protein L20 3 109 2.3E-49 T 13-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 7.1E-54 T 13-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 SUPERFAMILY SSF47928 3 105 4.97E-24 T 13-09-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 2.3E-22 T 13-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.3E-22 T 13-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 2.3E-22 T 13-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 2.3E-22 T 13-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 2.3E-22 T 13-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 7.8E-49 T 13-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 PANTHER PTHR11910 8 177 1.2E-48 T 13-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 Gene3D G3DSA:1.10.520.20 2 106 5.5E-31 T 13-09-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain PMA3_RS30020 a353871dddf23733ccf4535d559b5098 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.877 T 13-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 Pfam PF01593 Flavin containing amine oxidoreductase 55 531 3.6E-42 T 13-09-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 47 69 1.1E-5 T 13-09-2016 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 431 446 1.1E-5 T 13-09-2016 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 Gene3D G3DSA:3.50.50.60 499 543 2.0E-9 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 Gene3D G3DSA:3.50.50.60 240 359 2.0E-9 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 PANTHER PTHR10742:SF277 13 543 1.4E-85 T 13-09-2016 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 SUPERFAMILY SSF51905 45 380 3.17E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 SUPERFAMILY SSF51905 496 536 3.17E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 SUPERFAMILY SSF54373 360 474 4.51E-25 T 13-09-2016 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 Gene3D G3DSA:3.90.660.10 363 465 5.5E-26 T 13-09-2016 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 Gene3D G3DSA:3.90.660.10 76 149 5.5E-26 T 13-09-2016 PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 Gene3D G3DSA:3.40.50.720 44 75 7.6E-12 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27700 abe9bfbecc6be9ecbe42502dc383ca67 560 PANTHER PTHR10742 13 543 1.4E-85 T 13-09-2016 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 465 8.6E-147 T 13-09-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 PANTHER PTHR30203 4 484 1.1E-182 T 13-09-2016 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 Pfam PF02321 Outer membrane efflux protein 65 255 3.7E-25 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 Pfam PF02321 Outer membrane efflux protein 283 463 6.9E-28 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 Gene3D G3DSA:2.20.200.10 101 142 1.5E-22 T 13-09-2016 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 Gene3D G3DSA:2.20.200.10 315 350 1.5E-22 T 13-09-2016 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 SUPERFAMILY SSF56954 3 27 4.32E-118 T 13-09-2016 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 SUPERFAMILY SSF56954 56 467 4.32E-118 T 13-09-2016 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 Gene3D G3DSA:1.20.1600.10 53 91 6.3E-103 T 13-09-2016 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 Gene3D G3DSA:1.20.1600.10 143 314 6.3E-103 T 13-09-2016 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 Gene3D G3DSA:1.20.1600.10 352 466 6.3E-103 T 13-09-2016 PMA3_RS05445 e8541922ec3505a8f423303a924a2f49 486 PANTHER PTHR30203:SF15 4 484 1.1E-182 T 13-09-2016 PMA3_RS21415 bdedcac19bd69e5c613c790a17af93ad 189 Gene3D G3DSA:3.40.50.300 74 183 2.7E-12 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21415 bdedcac19bd69e5c613c790a17af93ad 189 Gene3D G3DSA:3.40.50.300 2 25 2.7E-12 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21415 bdedcac19bd69e5c613c790a17af93ad 189 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 183 6.6E-67 T 13-09-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 PMA3_RS21415 bdedcac19bd69e5c613c790a17af93ad 189 SUPERFAMILY SSF52540 3 184 1.78E-34 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21415 bdedcac19bd69e5c613c790a17af93ad 189 SMART SM00072 2 186 9.5E-6 T 13-09-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PMA3_RS21415 bdedcac19bd69e5c613c790a17af93ad 189 PANTHER PTHR23117:SF8 1 188 2.4E-65 T 13-09-2016 PMA3_RS21415 bdedcac19bd69e5c613c790a17af93ad 189 PANTHER PTHR23117 1 188 2.4E-65 T 13-09-2016 PMA3_RS21415 bdedcac19bd69e5c613c790a17af93ad 189 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 2 183 34.704 T 13-09-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 PMA3_RS11050 3f9f15fef4207c88396ccd3623cf5d68 184 SUPERFAMILY SSF47413 8 72 2.79E-14 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS11050 3f9f15fef4207c88396ccd3623cf5d68 184 PANTHER PTHR10245:SF53 10 184 4.3E-43 T 13-09-2016 PMA3_RS11050 3f9f15fef4207c88396ccd3623cf5d68 184 Gene3D G3DSA:1.10.260.40 13 108 2.7E-18 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS11050 3f9f15fef4207c88396ccd3623cf5d68 184 SMART SM00530 13 68 9.2E-11 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS11050 3f9f15fef4207c88396ccd3623cf5d68 184 PANTHER PTHR10245 10 184 4.3E-43 T 13-09-2016 PMA3_RS11050 3f9f15fef4207c88396ccd3623cf5d68 184 Pfam PF07883 Cupin domain 114 183 4.1E-14 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS11050 3f9f15fef4207c88396ccd3623cf5d68 184 SUPERFAMILY SSF51182 54 183 1.2E-25 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS11050 3f9f15fef4207c88396ccd3623cf5d68 184 Gene3D G3DSA:2.60.120.10 109 183 7.3E-19 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS11050 3f9f15fef4207c88396ccd3623cf5d68 184 Pfam PF01381 Helix-turn-helix 14 68 3.2E-12 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 SUPERFAMILY SSF52172 4 187 9.82E-44 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 SUPERFAMILY SSF52540 145 373 5.21E-65 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 Pfam PF00072 Response regulator receiver domain 5 112 1.8E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 Gene3D G3DSA:1.10.8.60 317 362 2.9E-18 T 13-09-2016 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 Gene3D G3DSA:1.10.10.60 363 435 5.0E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 Pfam PF00158 Sigma-54 interaction domain 145 310 1.6E-65 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 SMART SM00382 164 307 6.9E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 SUPERFAMILY SSF46689 355 435 2.28E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 PANTHER PTHR32071 1 443 3.9E-249 T 13-09-2016 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 Gene3D G3DSA:3.40.50.300 143 316 2.2E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 PANTHER PTHR32071:SF40 1 443 3.9E-249 T 13-09-2016 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 Gene3D G3DSA:3.40.50.2300 4 133 5.0E-37 T 13-09-2016 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 Pfam PF02954 Bacterial regulatory protein, Fis family 394 433 2.1E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS23475 e927ab3548668c488708546f9bcbf5cf 444 SMART SM00448 3 114 3.8E-34 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 SUPERFAMILY SSF46626 20 161 4.38E-44 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 SUPERFAMILY SSF46626 201 223 4.38E-44 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 Gene3D G3DSA:1.20.5.100 231 260 1.0E-7 T 13-09-2016 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 Pfam PF02167 Cytochrome C1 family 89 259 1.7E-9 T 13-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 PANTHER PTHR10266 36 163 4.4E-58 T 13-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 PANTHER PTHR10266 203 260 4.4E-58 T 13-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 PANTHER PTHR10266:SF3 36 163 4.4E-58 T 13-09-2016 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 PANTHER PTHR10266:SF3 203 260 4.4E-58 T 13-09-2016 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 PRINTS PR00603 Cytochrome C1 signature 106 130 2.5E-6 T 13-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 PRINTS PR00603 Cytochrome C1 signature 44 63 2.5E-6 T 13-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 PRINTS PR00603 Cytochrome C1 signature 206 225 2.5E-6 T 13-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 PRINTS PR00603 Cytochrome C1 signature 225 240 2.5E-6 T 13-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PMA3_RS04055 e9a1b4e797837dc6f8b1128d9d064f16 260 Gene3D G3DSA:1.10.760.10 20 225 9.7E-58 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 700 0.0 T 13-09-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 SUPERFAMILY SSF54980 612 698 1.29E-28 T 13-09-2016 IPR009022 Elongation factor G, III-V domain PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 SUPERFAMILY SSF52540 6 288 6.49E-100 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Pfam PF14492 Elongation Factor G, domain II 412 486 4.1E-35 T 13-09-2016 IPR009022 Elongation factor G, III-V domain PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Pfam PF03764 Elongation factor G, domain IV 487 606 2.8E-43 T 13-09-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PANTHER PTHR23115 311 700 0.0 T 13-09-2016 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PANTHER PTHR23115 262 290 0.0 T 13-09-2016 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 106.652 T 13-09-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Pfam PF00679 Elongation factor G C-terminus 609 694 7.3E-30 T 13-09-2016 IPR000640 Translation elongation factor EFG, V domain PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Pfam PF03144 Elongation factor Tu domain 2 332 399 2.8E-16 T 13-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Gene3D G3DSA:3.30.70.240 608 694 2.7E-31 T 13-09-2016 IPR000640 Translation elongation factor EFG, V domain PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 3.7E-32 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Gene3D G3DSA:3.30.230.10 492 607 7.0E-46 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Gene3D G3DSA:3.40.50.300 6 294 1.0E-96 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.2E-63 T 13-09-2016 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PRINTS PR00315 GTP-binding elongation factor signature 86 96 4.5E-17 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.5E-17 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PRINTS PR00315 GTP-binding elongation factor signature 102 113 4.5E-17 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.5E-17 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PRINTS PR00315 GTP-binding elongation factor signature 138 147 4.5E-17 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PANTHER PTHR23115:SF66 311 700 0.0 T 13-09-2016 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PANTHER PTHR23115:SF66 262 290 0.0 T 13-09-2016 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PANTHER PTHR23115:SF66 3 185 0.0 T 13-09-2016 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 SUPERFAMILY SSF50447 272 412 1.86E-33 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 PANTHER PTHR23115 3 185 0.0 T 13-09-2016 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 SUPERFAMILY SSF54980 410 488 1.51E-25 T 13-09-2016 IPR009022 Elongation factor G, III-V domain PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Gene3D G3DSA:3.30.70.870 414 488 1.0E-39 T 13-09-2016 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 SMART SM00889 488 607 1.5E-67 T 13-09-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 SMART SM00838 609 696 4.3E-54 T 13-09-2016 IPR000640 Translation elongation factor EFG, V domain PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 Gene3D G3DSA:2.40.30.10 313 413 5.6E-37 T 13-09-2016 PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-09-2016 IPR031157 Tr-type G domain, conserved site PMA3_RS27280 5fc30da31239e63e3296c19dbb6d996d 701 SUPERFAMILY SSF54211 487 607 1.95E-40 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS18150 f977acc1c9bad215d06c706906776e36 319 Gene3D G3DSA:3.40.50.1220 196 318 2.2E-41 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS18150 f977acc1c9bad215d06c706906776e36 319 PANTHER PTHR10909:SF299 201 301 2.5E-28 T 13-09-2016 PMA3_RS18150 f977acc1c9bad215d06c706906776e36 319 Pfam PF01012 Electron transfer flavoprotein domain 15 162 2.0E-8 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS18150 f977acc1c9bad215d06c706906776e36 319 SUPERFAMILY SSF52467 200 318 1.31E-35 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS18150 f977acc1c9bad215d06c706906776e36 319 SUPERFAMILY SSF52402 20 163 6.63E-10 T 13-09-2016 PMA3_RS18150 f977acc1c9bad215d06c706906776e36 319 PANTHER PTHR10909 201 301 2.5E-28 T 13-09-2016 PMA3_RS18150 f977acc1c9bad215d06c706906776e36 319 Gene3D G3DSA:3.40.50.620 1 162 8.3E-10 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS18150 f977acc1c9bad215d06c706906776e36 319 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 201 278 3.9E-26 T 13-09-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 PANTHER PTHR11751 11 74 1.7E-12 T 13-09-2016 PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 PANTHER PTHR11751 143 166 1.7E-12 T 13-09-2016 PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 4.1E-7 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 4.1E-7 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 Gene3D G3DSA:1.10.10.10 9 73 5.8E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 SMART SM00345 13 72 6.0E-15 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 3.2E-15 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 Gene3D G3DSA:3.40.1410.10 81 229 6.2E-18 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 SMART SM00866 91 228 8.8E-8 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 SUPERFAMILY SSF46785 8 75 8.02E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 SUPERFAMILY SSF64288 61 233 2.04E-19 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS06710 909015e240197e34ce8350a06fb10f3d 237 Pfam PF07702 UTRA domain 96 227 1.3E-13 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS17705 2a6f96feb29de77b2923257ea7f21537 612 Gene3D G3DSA:3.20.20.140 205 482 2.1E-17 T 13-09-2016 PMA3_RS17705 2a6f96feb29de77b2923257ea7f21537 612 SUPERFAMILY SSF51556 61 123 4.82E-43 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS17705 2a6f96feb29de77b2923257ea7f21537 612 SUPERFAMILY SSF51556 203 491 4.82E-43 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS17705 2a6f96feb29de77b2923257ea7f21537 612 PANTHER PTHR22642 3 551 2.2E-172 T 13-09-2016 PMA3_RS17705 2a6f96feb29de77b2923257ea7f21537 612 Pfam PF07969 Amidohydrolase family 50 532 2.7E-121 T 13-09-2016 IPR013108 Amidohydrolase 3 PMA3_RS17705 2a6f96feb29de77b2923257ea7f21537 612 Gene3D G3DSA:2.30.40.10 1 112 4.3E-17 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS17705 2a6f96feb29de77b2923257ea7f21537 612 PANTHER PTHR22642:SF2 3 551 2.2E-172 T 13-09-2016 PMA3_RS17705 2a6f96feb29de77b2923257ea7f21537 612 SUPERFAMILY SSF51338 491 536 2.13E-24 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS17705 2a6f96feb29de77b2923257ea7f21537 612 SUPERFAMILY SSF51338 1 62 2.13E-24 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS17920 7080bd2885cf5358a3b57e50252a9600 265 PANTHER PTHR30193 1 265 8.6E-97 T 13-09-2016 PMA3_RS17920 7080bd2885cf5358a3b57e50252a9600 265 SUPERFAMILY SSF161098 6 253 3.74E-55 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17920 7080bd2885cf5358a3b57e50252a9600 265 Gene3D G3DSA:1.10.3720.10 7 254 4.8E-52 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17920 7080bd2885cf5358a3b57e50252a9600 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 254 5.6E-15 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17920 7080bd2885cf5358a3b57e50252a9600 265 PANTHER PTHR30193:SF30 1 265 8.6E-97 T 13-09-2016 PMA3_RS27560 4438d66ee839ccc71e7d3a9a1f2c0e20 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 325 36.029 T 13-09-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PMA3_RS27560 4438d66ee839ccc71e7d3a9a1f2c0e20 329 Gene3D G3DSA:3.40.718.10 3 328 2.3E-134 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS27560 4438d66ee839ccc71e7d3a9a1f2c0e20 329 PANTHER PTHR30004:SF5 1 328 7.6E-201 T 13-09-2016 PMA3_RS27560 4438d66ee839ccc71e7d3a9a1f2c0e20 329 PANTHER PTHR30004 1 328 7.6E-201 T 13-09-2016 PMA3_RS27560 4438d66ee839ccc71e7d3a9a1f2c0e20 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 321 1.2E-108 T 13-09-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PMA3_RS27560 4438d66ee839ccc71e7d3a9a1f2c0e20 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 325 3.5E-127 T 13-09-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PMA3_RS27560 4438d66ee839ccc71e7d3a9a1f2c0e20 329 SUPERFAMILY SSF53659 3 327 6.1E-112 T 13-09-2016 PMA3_RS22780 949cb11995d56c738365dbc98429cece 57 Gene3D G3DSA:1.10.260.40 8 49 2.9E-8 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS22780 949cb11995d56c738365dbc98429cece 57 SUPERFAMILY SSF47413 4 49 2.85E-9 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS22780 949cb11995d56c738365dbc98429cece 57 PANTHER PTHR40275 4 56 2.3E-14 T 13-09-2016 PMA3_RS22780 949cb11995d56c738365dbc98429cece 57 Pfam PF01381 Helix-turn-helix 6 49 2.7E-6 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS22780 949cb11995d56c738365dbc98429cece 57 PANTHER PTHR40275:SF1 4 56 2.3E-14 T 13-09-2016 PMA3_RS22780 949cb11995d56c738365dbc98429cece 57 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 3 50 7.8E-21 T 13-09-2016 IPR014057 Addiction module antidote protein, HI1420 PMA3_RS09675 cafd2a4066db99801673e538dc16677d 236 PANTHER PTHR30450:SF5 1 236 3.7E-135 T 13-09-2016 PMA3_RS09675 cafd2a4066db99801673e538dc16677d 236 Gene3D G3DSA:1.10.3720.10 19 228 1.4E-31 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09675 cafd2a4066db99801673e538dc16677d 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 225 3.2E-13 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09675 cafd2a4066db99801673e538dc16677d 236 PANTHER PTHR30450 1 236 3.7E-135 T 13-09-2016 PMA3_RS09675 cafd2a4066db99801673e538dc16677d 236 SUPERFAMILY SSF161098 18 220 3.66E-32 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09675 cafd2a4066db99801673e538dc16677d 236 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 1.4E-14 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS16250 629459bda01db462741414da7108d792 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 175 215 1.9E-17 T 13-09-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS16250 629459bda01db462741414da7108d792 215 Gene3D G3DSA:2.30.110.10 17 215 4.1E-78 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS16250 629459bda01db462741414da7108d792 215 PIRSF PIRSF000190 1 215 3.8E-74 T 13-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS16250 629459bda01db462741414da7108d792 215 SUPERFAMILY SSF50475 8 215 2.36E-65 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS16250 629459bda01db462741414da7108d792 215 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 215 37.205 T 13-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS16250 629459bda01db462741414da7108d792 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 215 1.3E-80 T 13-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS16250 629459bda01db462741414da7108d792 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 185 198 - T 13-09-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS16250 629459bda01db462741414da7108d792 215 PANTHER PTHR10851:SF0 1 215 1.2E-99 T 13-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS16250 629459bda01db462741414da7108d792 215 PANTHER PTHR10851 1 215 1.2E-99 T 13-09-2016 PMA3_RS16250 629459bda01db462741414da7108d792 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 46 119 2.4E-24 T 13-09-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS22870 4ae0fd92bae2d86798c96bec20cea493 196 PIRSF PIRSF029811 2 196 6.3E-66 T 13-09-2016 IPR027016 Uncharacterised protein with YceI domain PMA3_RS22870 4ae0fd92bae2d86798c96bec20cea493 196 SUPERFAMILY SSF101874 24 194 7.46E-17 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS22870 4ae0fd92bae2d86798c96bec20cea493 196 Pfam PF04264 YceI-like domain 26 166 5.4E-8 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS22870 4ae0fd92bae2d86798c96bec20cea493 196 SMART SM00867 25 194 7.9E-14 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS22870 4ae0fd92bae2d86798c96bec20cea493 196 Gene3D G3DSA:2.40.128.110 24 171 2.0E-6 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS13710 cccc2f7995a8273c106035e3a392c4e9 198 PANTHER PTHR18968 10 172 5.2E-19 T 13-09-2016 PMA3_RS13710 cccc2f7995a8273c106035e3a392c4e9 198 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 43 122 1.1E-14 T 13-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PMA3_RS13710 cccc2f7995a8273c106035e3a392c4e9 198 Gene3D G3DSA:3.40.50.970 17 175 2.7E-19 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS13710 cccc2f7995a8273c106035e3a392c4e9 198 SUPERFAMILY SSF52518 14 176 1.05E-25 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS13710 cccc2f7995a8273c106035e3a392c4e9 198 PANTHER PTHR18968:SF81 10 172 5.2E-19 T 13-09-2016 PMA3_RS10395 ef02b2b5f6a724090a9269d9682018fc 108 Pfam PF00355 Rieske [2Fe-2S] domain 21 89 3.5E-13 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10395 ef02b2b5f6a724090a9269d9682018fc 108 Gene3D G3DSA:2.102.10.10 10 101 2.0E-25 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10395 ef02b2b5f6a724090a9269d9682018fc 108 SUPERFAMILY SSF50022 14 101 1.3E-24 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10395 ef02b2b5f6a724090a9269d9682018fc 108 PANTHER PTHR21496 14 102 1.5E-16 T 13-09-2016 PMA3_RS06170 77a5c0846ff75c4ea0c989db985a9d1c 61 SUPERFAMILY SSF158997 1 55 8.24E-21 T 13-09-2016 PMA3_RS06170 77a5c0846ff75c4ea0c989db985a9d1c 61 Pfam PF03966 Trm112p-like protein 2 41 1.1E-10 T 13-09-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 PMA3_RS06170 77a5c0846ff75c4ea0c989db985a9d1c 61 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.502 T 13-09-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 PMA3_RS06170 77a5c0846ff75c4ea0c989db985a9d1c 61 Gene3D G3DSA:2.20.25.10 8 58 2.4E-26 T 13-09-2016 PMA3_RS06170 77a5c0846ff75c4ea0c989db985a9d1c 61 PANTHER PTHR33505 1 58 1.2E-26 T 13-09-2016 PMA3_RS08515 9ae913c455645229dead2bc458ed5aa5 744 SUPERFAMILY SSF52540 549 730 6.26E-36 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08515 9ae913c455645229dead2bc458ed5aa5 744 PANTHER PTHR32309 1 127 3.1E-181 T 13-09-2016 PMA3_RS08515 9ae913c455645229dead2bc458ed5aa5 744 PANTHER PTHR32309:SF17 1 127 3.1E-181 T 13-09-2016 PMA3_RS08515 9ae913c455645229dead2bc458ed5aa5 744 Gene3D G3DSA:3.40.50.300 550 728 5.2E-33 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08515 9ae913c455645229dead2bc458ed5aa5 744 Pfam PF13807 G-rich domain on putative tyrosine kinase 390 472 2.6E-33 T 13-09-2016 IPR032807 Tyrosine kinase, G-rich domain PMA3_RS08515 9ae913c455645229dead2bc458ed5aa5 744 PANTHER PTHR32309 208 744 3.1E-181 T 13-09-2016 PMA3_RS08515 9ae913c455645229dead2bc458ed5aa5 744 Pfam PF13614 AAA domain 561 678 2.3E-13 T 13-09-2016 IPR025669 AAA domain PMA3_RS08515 9ae913c455645229dead2bc458ed5aa5 744 Pfam PF02706 Chain length determinant protein 17 273 6.2E-37 T 13-09-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PMA3_RS08515 9ae913c455645229dead2bc458ed5aa5 744 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 531 735 1.3E-52 T 13-09-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 PMA3_RS08515 9ae913c455645229dead2bc458ed5aa5 744 PANTHER PTHR32309:SF17 208 744 3.1E-181 T 13-09-2016 PMA3_RS22675 7bd101a76c9cb901845f6ae088e661fd 346 PANTHER PTHR12715 4 280 4.7E-21 T 13-09-2016 PMA3_RS22675 7bd101a76c9cb901845f6ae088e661fd 346 SUPERFAMILY SSF103481 194 286 1.26E-11 T 13-09-2016 PMA3_RS22675 7bd101a76c9cb901845f6ae088e661fd 346 SUPERFAMILY SSF103481 63 143 3.92E-13 T 13-09-2016 PMA3_RS22675 7bd101a76c9cb901845f6ae088e661fd 346 Pfam PF00892 EamA-like transporter family 4 138 3.0E-19 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS22675 7bd101a76c9cb901845f6ae088e661fd 346 Pfam PF00892 EamA-like transporter family 151 281 1.0E-10 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS19495 d11f204e29dc59bfa1048b1394d3e888 143 Gene3D G3DSA:3.40.630.30 41 139 8.8E-29 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19495 d11f204e29dc59bfa1048b1394d3e888 143 Pfam PF00583 Acetyltransferase (GNAT) family 46 117 2.5E-10 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS19495 d11f204e29dc59bfa1048b1394d3e888 143 SUPERFAMILY SSF55729 36 139 6.42E-27 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19495 d11f204e29dc59bfa1048b1394d3e888 143 PANTHER PTHR23091 36 143 1.2E-15 T 13-09-2016 PMA3_RS15715 85723f32b40994a145cdcd95033705f0 324 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 16 324 8.7E-164 T 13-09-2016 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein PMA3_RS15715 85723f32b40994a145cdcd95033705f0 324 Pfam PF02239 Cytochrome D1 heme domain 68 164 7.9E-8 T 13-09-2016 PMA3_RS15715 85723f32b40994a145cdcd95033705f0 324 Gene3D G3DSA:2.130.10.10 23 324 7.7E-79 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS15715 85723f32b40994a145cdcd95033705f0 324 PANTHER PTHR13833 25 187 1.5E-27 T 13-09-2016 PMA3_RS15715 85723f32b40994a145cdcd95033705f0 324 PANTHER PTHR13833 280 322 1.5E-27 T 13-09-2016 PMA3_RS15715 85723f32b40994a145cdcd95033705f0 324 SUPERFAMILY SSF50974 6 324 2.35E-84 T 13-09-2016 IPR011045 Nitrous oxide reductase, N-terminal PMA3_RS15715 85723f32b40994a145cdcd95033705f0 324 Pfam PF10282 Lactonase, 7-bladed beta-propeller 183 304 2.7E-4 T 13-09-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 PMA3_RS15715 85723f32b40994a145cdcd95033705f0 324 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 27 62 8.5E-8 T 13-09-2016 IPR011964 YVTN beta-propeller repeat PMA3_RS15715 85723f32b40994a145cdcd95033705f0 324 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 106 147 8.9E-12 T 13-09-2016 IPR011964 YVTN beta-propeller repeat PMA3_RS15715 85723f32b40994a145cdcd95033705f0 324 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 282 323 2.1E-12 T 13-09-2016 IPR011964 YVTN beta-propeller repeat PMA3_RS10600 833d697ef8167c8c85813852b97bc7fa 589 PIRSF PIRSF028304 3 588 7.3E-163 T 13-09-2016 IPR010272 Type VI secretion system, TssF-like PMA3_RS10600 833d697ef8167c8c85813852b97bc7fa 589 PANTHER PTHR35370 4 589 2.2E-256 T 13-09-2016 PMA3_RS10600 833d697ef8167c8c85813852b97bc7fa 589 PANTHER PTHR35370:SF4 4 589 2.2E-256 T 13-09-2016 PMA3_RS10600 833d697ef8167c8c85813852b97bc7fa 589 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 8 586 1.0E-171 T 13-09-2016 IPR010272 Type VI secretion system, TssF-like PMA3_RS10600 833d697ef8167c8c85813852b97bc7fa 589 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 8 586 3.8E-188 T 13-09-2016 IPR010272 Type VI secretion system, TssF-like PMA3_RS21225 94139cbe322afcd2f260002efec43c18 133 Gene3D G3DSA:1.20.120.550 3 126 8.8E-19 T 13-09-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain PMA3_RS21225 94139cbe322afcd2f260002efec43c18 133 PANTHER PTHR35371 1 124 4.1E-28 T 13-09-2016 PMA3_RS21225 94139cbe322afcd2f260002efec43c18 133 SUPERFAMILY SSF161084 5 124 5.76E-28 T 13-09-2016 PMA3_RS21225 94139cbe322afcd2f260002efec43c18 133 Pfam PF01124 MAPEG family 4 124 1.6E-26 T 13-09-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PMA3_RS21225 94139cbe322afcd2f260002efec43c18 133 PANTHER PTHR35371:SF1 1 124 4.1E-28 T 13-09-2016 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 SMART SM00480 17 363 3.7E-167 T 13-09-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 Gene3D G3DSA:3.10.150.10 250 367 1.2E-38 T 13-09-2016 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 5.2E-43 T 13-09-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 SUPERFAMILY SSF55979 246 367 1.09E-37 T 13-09-2016 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 PIRSF PIRSF000804 1 367 8.6E-124 T 13-09-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 Gene3D G3DSA:3.10.150.10 1 120 1.5E-35 T 13-09-2016 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 244 3.0E-39 T 13-09-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 SUPERFAMILY SSF55979 1 120 6.06E-30 T 13-09-2016 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 SUPERFAMILY SSF55979 128 245 1.93E-29 T 13-09-2016 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 Gene3D G3DSA:3.10.150.10 128 249 1.7E-36 T 13-09-2016 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 1.3E-109 T 13-09-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 PANTHER PTHR30478 2 367 3.1E-146 T 13-09-2016 PMA3_RS30100 e3750593e88f47fc8dba326f6ad4322d 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 4.7E-42 T 13-09-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS09665 48ae687deb739af2928a79a66922e848 260 PANTHER PTHR18966 28 251 1.7E-51 T 13-09-2016 PMA3_RS09665 48ae687deb739af2928a79a66922e848 260 SUPERFAMILY SSF53850 10 253 1.55E-59 T 13-09-2016 PMA3_RS09665 48ae687deb739af2928a79a66922e848 260 PANTHER PTHR18966:SF227 28 251 1.7E-51 T 13-09-2016 PMA3_RS09665 48ae687deb739af2928a79a66922e848 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 13-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PMA3_RS09665 48ae687deb739af2928a79a66922e848 260 Gene3D G3DSA:3.40.190.10 116 205 4.1E-22 T 13-09-2016 PMA3_RS09665 48ae687deb739af2928a79a66922e848 260 SMART SM00062 27 254 1.8E-56 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS09665 48ae687deb739af2928a79a66922e848 260 Gene3D G3DSA:3.40.190.10 213 252 2.3E-37 T 13-09-2016 PMA3_RS09665 48ae687deb739af2928a79a66922e848 260 Gene3D G3DSA:3.40.190.10 25 113 2.3E-37 T 13-09-2016 PMA3_RS09665 48ae687deb739af2928a79a66922e848 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 252 1.5E-55 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS24695 a2109cb7e2df92b9a0a6e9dea3aec25f 287 SUPERFAMILY SSF111369 42 200 7.19E-20 T 13-09-2016 PMA3_RS24695 a2109cb7e2df92b9a0a6e9dea3aec25f 287 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 226 3.5E-16 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS24695 a2109cb7e2df92b9a0a6e9dea3aec25f 287 Gene3D G3DSA:2.40.50.100 44 76 8.5E-17 T 13-09-2016 PMA3_RS24695 a2109cb7e2df92b9a0a6e9dea3aec25f 287 Gene3D G3DSA:2.40.50.100 150 183 8.5E-17 T 13-09-2016 PMA3_RS24695 a2109cb7e2df92b9a0a6e9dea3aec25f 287 PANTHER PTHR30367:SF5 7 283 1.2E-135 T 13-09-2016 PMA3_RS24695 a2109cb7e2df92b9a0a6e9dea3aec25f 287 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 226 9.9E-33 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS24695 a2109cb7e2df92b9a0a6e9dea3aec25f 287 PANTHER PTHR30367 7 283 1.2E-135 T 13-09-2016 PMA3_RS02100 87789233a7f8af5fa45300b5aba8a395 336 PIRSF PIRSF002825 20 336 2.2E-74 T 13-09-2016 IPR026045 Ferric binding protein PMA3_RS02100 87789233a7f8af5fa45300b5aba8a395 336 PANTHER PTHR30006 1 327 2.0E-88 T 13-09-2016 PMA3_RS02100 87789233a7f8af5fa45300b5aba8a395 336 PANTHER PTHR30006:SF6 1 327 2.0E-88 T 13-09-2016 PMA3_RS02100 87789233a7f8af5fa45300b5aba8a395 336 Gene3D G3DSA:3.40.190.10 11 127 1.1E-33 T 13-09-2016 PMA3_RS02100 87789233a7f8af5fa45300b5aba8a395 336 Gene3D G3DSA:3.40.190.10 269 320 1.1E-33 T 13-09-2016 PMA3_RS02100 87789233a7f8af5fa45300b5aba8a395 336 SUPERFAMILY SSF53850 33 323 9.45E-71 T 13-09-2016 PMA3_RS02100 87789233a7f8af5fa45300b5aba8a395 336 Pfam PF13343 Bacterial extracellular solute-binding protein 81 295 1.9E-26 T 13-09-2016 PMA3_RS02100 87789233a7f8af5fa45300b5aba8a395 336 Gene3D G3DSA:3.40.190.10 132 268 1.1E-44 T 13-09-2016 PMA3_RS02325 3ab39940d08d3dff1f86f0fd92d0ecf1 176 PANTHER PTHR30295 13 176 2.5E-51 T 13-09-2016 PMA3_RS02325 3ab39940d08d3dff1f86f0fd92d0ecf1 176 PIRSF PIRSF018063 12 176 4.7E-61 T 13-09-2016 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold PMA3_RS02325 3ab39940d08d3dff1f86f0fd92d0ecf1 176 Gene3D G3DSA:1.20.1260.10 32 175 4.5E-50 T 13-09-2016 IPR012347 Ferritin-related PMA3_RS02325 3ab39940d08d3dff1f86f0fd92d0ecf1 176 PRINTS PR00601 Bacterioferritin signature 73 93 4.4E-5 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS02325 3ab39940d08d3dff1f86f0fd92d0ecf1 176 PRINTS PR00601 Bacterioferritin signature 32 51 4.4E-5 T 13-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PMA3_RS02325 3ab39940d08d3dff1f86f0fd92d0ecf1 176 PANTHER PTHR30295:SF1 13 176 2.5E-51 T 13-09-2016 PMA3_RS02325 3ab39940d08d3dff1f86f0fd92d0ecf1 176 SUPERFAMILY SSF47240 31 175 4.07E-38 T 13-09-2016 IPR009078 Ferritin-like superfamily PMA3_RS02325 3ab39940d08d3dff1f86f0fd92d0ecf1 176 Pfam PF00210 Ferritin-like domain 39 176 6.8E-29 T 13-09-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PMA3_RS29700 f8e3fcfa871ee76a70987c13e8e2083e 556 SUPERFAMILY SSF161098 282 538 7.06E-36 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29700 f8e3fcfa871ee76a70987c13e8e2083e 556 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 550 3.1E-19 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29700 f8e3fcfa871ee76a70987c13e8e2083e 556 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 4.5E-74 T 13-09-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 PMA3_RS29700 f8e3fcfa871ee76a70987c13e8e2083e 556 PANTHER PTHR30425 196 554 1.2E-239 T 13-09-2016 PMA3_RS29700 f8e3fcfa871ee76a70987c13e8e2083e 556 PANTHER PTHR30425:SF7 196 554 1.2E-239 T 13-09-2016 PMA3_RS29700 f8e3fcfa871ee76a70987c13e8e2083e 556 Gene3D G3DSA:1.10.3720.10 283 552 4.3E-52 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 Gene3D G3DSA:3.30.70.360 196 296 1.2E-33 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 SUPERFAMILY SSF55031 187 296 5.98E-29 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 SUPERFAMILY SSF53187 300 381 3.01E-61 T 13-09-2016 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 SUPERFAMILY SSF53187 6 186 3.01E-61 T 13-09-2016 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 8 383 51.102 T 13-09-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 143 - T 13-09-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 11 381 4.7E-160 T 13-09-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 PANTHER PTHR11014 9 382 2.2E-84 T 13-09-2016 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 Pfam PF01546 Peptidase family M20/M25/M40 69 378 6.2E-39 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 Gene3D G3DSA:3.40.630.10 9 195 7.3E-66 T 13-09-2016 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 Gene3D G3DSA:3.40.630.10 324 381 7.3E-66 T 13-09-2016 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 PANTHER PTHR11014:SF106 9 382 2.2E-84 T 13-09-2016 PMA3_RS04770 b570d5553b00abb650474c4a0fc815c5 383 Pfam PF07687 Peptidase dimerisation domain 183 289 3.7E-25 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS04175 f47e688d7b40f127b01cc2b24123d6db 303 SUPERFAMILY SSF54211 134 277 2.65E-52 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS04175 f47e688d7b40f127b01cc2b24123d6db 303 Gene3D G3DSA:3.30.230.20 3 125 2.7E-46 T 13-09-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PMA3_RS04175 f47e688d7b40f127b01cc2b24123d6db 303 PANTHER PTHR33694:SF1 1 303 2.1E-134 T 13-09-2016 PMA3_RS04175 f47e688d7b40f127b01cc2b24123d6db 303 Gene3D G3DSA:3.30.1700.10 128 282 5.1E-60 T 13-09-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PMA3_RS04175 f47e688d7b40f127b01cc2b24123d6db 303 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 49.527 T 13-09-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PMA3_RS04175 f47e688d7b40f127b01cc2b24123d6db 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 5.9E-108 T 13-09-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PMA3_RS04175 f47e688d7b40f127b01cc2b24123d6db 303 SUPERFAMILY SSF54211 3 124 2.96E-42 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS04175 f47e688d7b40f127b01cc2b24123d6db 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 2.1E-118 T 13-09-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PMA3_RS04175 f47e688d7b40f127b01cc2b24123d6db 303 PANTHER PTHR33694 1 303 2.1E-134 T 13-09-2016 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 PANTHER PTHR10909 13 375 5.0E-176 T 13-09-2016 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 PANTHER PTHR10909:SF300 13 375 5.0E-176 T 13-09-2016 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 8 395 1.9E-187 T 13-09-2016 IPR023922 Sulphate-starvation-induced SfnB PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 34 119 6.5E-11 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 SUPERFAMILY SSF56645 22 221 3.4E-47 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 Gene3D G3DSA:1.20.140.10 215 392 7.8E-58 T 13-09-2016 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 Gene3D G3DSA:2.40.110.10 139 214 1.1E-22 T 13-09-2016 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 Gene3D G3DSA:1.10.540.10 8 113 6.8E-27 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 PIRSF PIRSF016578 3 393 3.0E-35 T 13-09-2016 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 SUPERFAMILY SSF47203 227 392 2.74E-23 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 213 1.6E-9 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS00695 fd127fcc33fc89692cb5d2da987c92ea 397 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 240 372 3.8E-21 T 13-09-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS06455 e62cadd6dca3353f09f89b86263768ef 303 PANTHER PTHR11562 15 299 1.9E-101 T 13-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PMA3_RS06455 e62cadd6dca3353f09f89b86263768ef 303 SUPERFAMILY SSF161111 15 210 2.75E-57 T 13-09-2016 PMA3_RS06455 e62cadd6dca3353f09f89b86263768ef 303 Gene3D G3DSA:1.20.1510.10 15 209 2.9E-60 T 13-09-2016 IPR027469 Cation efflux protein transmembrane domain PMA3_RS06455 e62cadd6dca3353f09f89b86263768ef 303 PANTHER PTHR11562:SF17 15 299 1.9E-101 T 13-09-2016 PMA3_RS06455 e62cadd6dca3353f09f89b86263768ef 303 SUPERFAMILY SSF160240 213 287 3.92E-8 T 13-09-2016 PMA3_RS06455 e62cadd6dca3353f09f89b86263768ef 303 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 288 6.7E-88 T 13-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PMA3_RS06455 e62cadd6dca3353f09f89b86263768ef 303 Pfam PF01545 Cation efflux family 18 209 1.8E-46 T 13-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 Gene3D G3DSA:3.40.190.10 181 255 6.1E-19 T 13-09-2016 PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 Gene3D G3DSA:1.10.10.10 1 86 9.0E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 Pfam PF03466 LysR substrate binding domain 87 287 2.1E-45 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 Gene3D G3DSA:3.40.190.10 88 180 1.0E-17 T 13-09-2016 PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.5E-21 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 SUPERFAMILY SSF53850 86 291 2.05E-42 T 13-09-2016 PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 SUPERFAMILY SSF46785 1 111 9.85E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 PANTHER PTHR30126:SF33 1 286 7.7E-163 T 13-09-2016 PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 PANTHER PTHR30126 1 286 7.7E-163 T 13-09-2016 PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.1E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.1E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09010 cf76456df8038e43d7c82d8f52c8cbe1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.1E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10475 61b42f00fd0983bb27359139a9f4c80e 220 Gene3D G3DSA:3.90.550.10 2 189 4.6E-19 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS10475 61b42f00fd0983bb27359139a9f4c80e 220 PANTHER PTHR22916 1 187 3.1E-18 T 13-09-2016 PMA3_RS10475 61b42f00fd0983bb27359139a9f4c80e 220 Pfam PF00535 Glycosyl transferase family 2 4 140 5.0E-15 T 13-09-2016 IPR001173 Glycosyltransferase 2-like PMA3_RS10475 61b42f00fd0983bb27359139a9f4c80e 220 SUPERFAMILY SSF53448 2 187 2.06E-27 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS12140 3ee2abbd95413b92f6842fa9c3f3aa63 134 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 131 2.0E-9 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12140 3ee2abbd95413b92f6842fa9c3f3aa63 134 Gene3D G3DSA:3.30.565.10 7 131 1.2E-13 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12140 3ee2abbd95413b92f6842fa9c3f3aa63 134 SUPERFAMILY SSF55874 24 131 6.16E-14 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 Pfam PF12002 MgsA AAA+ ATPase C terminal 261 427 2.0E-65 T 13-09-2016 IPR021886 MgsA AAA+ ATPase C-terminal PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 PANTHER PTHR13779 11 440 1.1E-189 T 13-09-2016 PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 Gene3D G3DSA:1.10.8.60 152 235 2.3E-10 T 13-09-2016 PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 Gene3D G3DSA:1.20.272.10 242 340 4.2E-43 T 13-09-2016 PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 Gene3D G3DSA:1.10.3710.10 341 437 2.6E-33 T 13-09-2016 PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 157 4.5E-15 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 PANTHER PTHR13779:SF7 11 440 1.1E-189 T 13-09-2016 PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 SUPERFAMILY SSF48019 245 426 3.57E-73 T 13-09-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 Pfam PF16193 AAA C-terminal domain 184 260 1.9E-20 T 13-09-2016 IPR032423 AAA ATPase, C-terminal domain PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 Gene3D G3DSA:3.40.50.300 10 151 4.9E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 SUPERFAMILY SSF52540 9 233 4.32E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19565 abf4612cc20dcec55a4a490a8856cc2c 440 SMART SM00382 46 163 6.9E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS01460 ea8f5e60de4cde296fbb3b23498d9366 78 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.7E-20 T 13-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS01460 ea8f5e60de4cde296fbb3b23498d9366 78 PRINTS PR01249 Ribosomal protein L31 signature 46 64 7.7E-20 T 13-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS01460 ea8f5e60de4cde296fbb3b23498d9366 78 PRINTS PR01249 Ribosomal protein L31 signature 31 46 7.7E-20 T 13-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS01460 ea8f5e60de4cde296fbb3b23498d9366 78 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 13-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS01460 ea8f5e60de4cde296fbb3b23498d9366 78 Pfam PF01197 Ribosomal protein L31 1 65 2.2E-28 T 13-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS01460 ea8f5e60de4cde296fbb3b23498d9366 78 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 28.365 T 13-09-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS01460 ea8f5e60de4cde296fbb3b23498d9366 78 SUPERFAMILY SSF143800 1 67 5.49E-26 T 13-09-2016 PMA3_RS01460 ea8f5e60de4cde296fbb3b23498d9366 78 PANTHER PTHR33280 1 74 1.6E-31 T 13-09-2016 PMA3_RS01460 ea8f5e60de4cde296fbb3b23498d9366 78 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 2.5E-32 T 13-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS01460 ea8f5e60de4cde296fbb3b23498d9366 78 PANTHER PTHR33280:SF2 1 74 1.6E-31 T 13-09-2016 PMA3_RS12850 0e60c4db97168d1233ee342cf5df4ce9 299 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 278 1.4E-58 T 13-09-2016 IPR021134 Bestrophin/UPF0187 PMA3_RS12850 0e60c4db97168d1233ee342cf5df4ce9 299 PANTHER PTHR33281 8 282 1.6E-61 T 13-09-2016 PMA3_RS07310 37e8895bc663f63aeda323b5c74a250f 470 PANTHER PTHR11986:SF7 31 466 7.6E-190 T 13-09-2016 PMA3_RS07310 37e8895bc663f63aeda323b5c74a250f 470 SUPERFAMILY SSF53383 39 463 8.35E-118 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS07310 37e8895bc663f63aeda323b5c74a250f 470 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 32 466 2.4E-166 T 13-09-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 PMA3_RS07310 37e8895bc663f63aeda323b5c74a250f 470 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 273 310 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS07310 37e8895bc663f63aeda323b5c74a250f 470 Gene3D G3DSA:3.40.640.10 85 338 3.8E-69 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS07310 37e8895bc663f63aeda323b5c74a250f 470 Pfam PF00202 Aminotransferase class-III 49 462 1.8E-87 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS07310 37e8895bc663f63aeda323b5c74a250f 470 PANTHER PTHR11986 31 466 7.6E-190 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS07310 37e8895bc663f63aeda323b5c74a250f 470 Gene3D G3DSA:3.90.1150.10 339 465 8.8E-47 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS08580 44935ec427ef07295a7073b78e1bda68 592 SMART SM00382 370 542 1.9E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS08580 44935ec427ef07295a7073b78e1bda68 592 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS08580 44935ec427ef07295a7073b78e1bda68 592 Pfam PF00664 ABC transporter transmembrane region 27 292 1.8E-51 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS08580 44935ec427ef07295a7073b78e1bda68 592 Gene3D G3DSA:3.40.50.300 343 574 5.5E-81 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08580 44935ec427ef07295a7073b78e1bda68 592 SUPERFAMILY SSF90123 15 320 4.19E-71 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS08580 44935ec427ef07295a7073b78e1bda68 592 Gene3D G3DSA:1.20.1560.10 15 320 7.5E-74 T 13-09-2016 PMA3_RS08580 44935ec427ef07295a7073b78e1bda68 592 Pfam PF00005 ABC transporter 362 510 2.2E-30 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS08580 44935ec427ef07295a7073b78e1bda68 592 PANTHER PTHR24221 10 589 1.6E-229 T 13-09-2016 PMA3_RS08580 44935ec427ef07295a7073b78e1bda68 592 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 6 581 4.6E-264 T 13-09-2016 IPR011918 ABC transporter, ATP-binding/permease protein PMA3_RS08580 44935ec427ef07295a7073b78e1bda68 592 SUPERFAMILY SSF52540 336 581 3.62E-88 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15790 22c1450cb6c28aea1f7f1f09fbb049f9 339 PANTHER PTHR11825 4 338 3.4E-156 T 13-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS15790 22c1450cb6c28aea1f7f1f09fbb049f9 339 ProSitePatterns PS00770 Aminotransferases class-IV signature. 220 249 - T 13-09-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS15790 22c1450cb6c28aea1f7f1f09fbb049f9 339 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 31 339 2.7E-139 T 13-09-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 PMA3_RS15790 22c1450cb6c28aea1f7f1f09fbb049f9 339 Pfam PF01063 Amino-transferase class IV 56 293 4.6E-39 T 13-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS15790 22c1450cb6c28aea1f7f1f09fbb049f9 339 PIRSF PIRSF006468 1 339 3.1E-117 T 13-09-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 PMA3_RS15790 22c1450cb6c28aea1f7f1f09fbb049f9 339 SUPERFAMILY SSF56752 5 336 1.05E-101 T 13-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS15790 22c1450cb6c28aea1f7f1f09fbb049f9 339 PANTHER PTHR11825:SF2 4 338 3.4E-156 T 13-09-2016 PMA3_RS15790 22c1450cb6c28aea1f7f1f09fbb049f9 339 Gene3D G3DSA:3.20.10.10 162 325 3.3E-55 T 13-09-2016 PMA3_RS15790 22c1450cb6c28aea1f7f1f09fbb049f9 339 Gene3D G3DSA:3.30.470.10 4 161 1.9E-65 T 13-09-2016 PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 Pfam PF17191 RecG wedge domain 11 171 8.2E-18 T 13-09-2016 IPR033454 RecG, wedge domain PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 SUPERFAMILY SSF52540 317 598 1.21E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 SMART SM00487 265 458 9.0E-26 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 663 9.6E-224 T 13-09-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 PANTHER PTHR24031:SF249 624 669 3.7E-126 T 13-09-2016 PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 SMART SM00490 503 587 4.7E-21 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 PANTHER PTHR24031 260 282 3.7E-126 T 13-09-2016 PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 PANTHER PTHR24031 299 600 3.7E-126 T 13-09-2016 PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 Pfam PF00270 DEAD/DEAH box helicase 293 408 5.0E-17 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 PANTHER PTHR24031 624 669 3.7E-126 T 13-09-2016 PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 Gene3D G3DSA:1.10.150.20 4 35 4.4E-4 T 13-09-2016 PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 Gene3D G3DSA:3.40.50.300 255 452 3.5E-50 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 Pfam PF00271 Helicase conserved C-terminal domain 479 586 2.1E-17 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 PANTHER PTHR24031:SF249 260 282 3.7E-126 T 13-09-2016 PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 PANTHER PTHR24031:SF249 299 600 3.7E-126 T 13-09-2016 PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 SUPERFAMILY SSF50249 7 172 2.06E-35 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 Gene3D G3DSA:2.40.50.140 45 138 1.6E-19 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS29605 be821f295fc67e192321e1846f5991b4 691 Gene3D G3DSA:3.40.50.300 453 636 1.8E-42 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 Gene3D G3DSA:3.40.190.10 92 178 8.2E-26 T 13-09-2016 PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 PANTHER PTHR30537:SF5 1 299 8.0E-114 T 13-09-2016 PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.2E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 Gene3D G3DSA:3.40.190.10 179 258 9.9E-6 T 13-09-2016 PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 Pfam PF03466 LysR substrate binding domain 88 292 2.5E-49 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 SUPERFAMILY SSF46785 4 86 1.62E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 PANTHER PTHR30537 1 299 8.0E-114 T 13-09-2016 PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 Gene3D G3DSA:1.10.10.10 3 86 1.3E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07390 4071af369c87bf6ff247bd0a042d784c 302 SUPERFAMILY SSF53850 90 295 6.15E-51 T 13-09-2016 PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 SMART SM00116 174 227 2.4 T 13-09-2016 IPR000644 CBS domain PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 SMART SM00116 238 286 4.1E-5 T 13-09-2016 IPR000644 CBS domain PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 SUPERFAMILY SSF158791 42 164 3.01E-27 T 13-09-2016 PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 Gene3D G3DSA:1.25.60.10 42 157 1.1E-23 T 13-09-2016 PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 SUPERFAMILY SSF161093 308 479 2.35E-49 T 13-09-2016 PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 Pfam PF01769 Divalent cation transporter 351 473 2.2E-25 T 13-09-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 PANTHER PTHR11911:SF99 1 460 7.7E-43 T 13-09-2016 PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 Pfam PF00571 CBS domain 231 285 8.7E-9 T 13-09-2016 IPR000644 CBS domain PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 Pfam PF00571 CBS domain 167 223 1.5E-4 T 13-09-2016 IPR000644 CBS domain PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 Gene3D G3DSA:3.10.580.10 158 290 2.4E-19 T 13-09-2016 PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 PANTHER PTHR11911 1 460 7.7E-43 T 13-09-2016 PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 Pfam PF03448 MgtE intracellular N domain 64 165 2.6E-24 T 13-09-2016 IPR006668 Magnesium transporter, MgtE intracellular domain PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 TIGRFAM TIGR00400 mgtE: magnesium transporter 44 479 2.0E-88 T 13-09-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 SMART SM00924 64 167 1.9E-33 T 13-09-2016 IPR006668 Magnesium transporter, MgtE intracellular domain PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 Gene3D G3DSA:1.10.357.20 307 479 2.1E-55 T 13-09-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PMA3_RS05700 17365fa11f9449ae83002ffdef71f8f9 480 SUPERFAMILY SSF54631 167 305 1.71E-30 T 13-09-2016 PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 Gene3D G3DSA:3.40.50.920 538 664 2.4E-47 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 Pfam PF02780 Transketolase, C-terminal domain 540 655 5.9E-17 T 13-09-2016 IPR033248 Transketolase, C-terminal domain PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 663 0.0 T 13-09-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 13-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 PANTHER PTHR11624 328 664 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 SMART SM00861 354 526 1.8E-64 T 13-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 SUPERFAMILY SSF52922 532 664 3.27E-42 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 PANTHER PTHR11624:SF1 1 309 0.0 T 13-09-2016 PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 SUPERFAMILY SSF52518 5 320 4.29E-119 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 333 1.6E-162 T 13-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 Gene3D G3DSA:3.40.50.970 327 532 6.8E-77 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 PANTHER PTHR11624 1 309 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 PANTHER PTHR11624:SF1 328 664 0.0 T 13-09-2016 PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 Pfam PF02779 Transketolase, pyrimidine binding domain 353 525 6.1E-45 T 13-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 Gene3D G3DSA:3.40.50.970 5 321 5.7E-130 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 SUPERFAMILY SSF52518 334 525 9.42E-67 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS28215 fcc5eda92408b7fd8b8921e94efebe73 665 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 13-09-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PMA3_RS07235 ef87f49cb4a0e85b280e90a390ed2ccb 538 PANTHER PTHR22855:SF29 1 538 0.0 T 13-09-2016 PMA3_RS07235 ef87f49cb4a0e85b280e90a390ed2ccb 538 SUPERFAMILY SSF52096 269 536 9.11E-74 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07235 ef87f49cb4a0e85b280e90a390ed2ccb 538 PANTHER PTHR22855 1 538 0.0 T 13-09-2016 PMA3_RS07235 ef87f49cb4a0e85b280e90a390ed2ccb 538 Pfam PF01039 Carboxyl transferase domain 49 517 2.2E-117 T 13-09-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS07235 ef87f49cb4a0e85b280e90a390ed2ccb 538 Gene3D G3DSA:3.90.226.10 38 268 7.1E-55 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07235 ef87f49cb4a0e85b280e90a390ed2ccb 538 Gene3D G3DSA:3.90.226.10 277 528 2.5E-72 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07235 ef87f49cb4a0e85b280e90a390ed2ccb 538 SUPERFAMILY SSF52096 33 268 1.99E-57 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 SUPERFAMILY SSF51230 1 96 7.46E-26 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 SUPERFAMILY SSF47005 104 148 3.01E-12 T 13-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 SUPERFAMILY SSF52777 168 407 2.58E-88 T 13-09-2016 PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 Gene3D G3DSA:4.10.320.10 107 156 3.0E-19 T 13-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 Pfam PF00364 Biotin-requiring enzyme 4 76 2.3E-18 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 408 2.9E-184 T 13-09-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 Pfam PF02817 e3 binding domain 111 144 1.5E-15 T 13-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 179 407 7.2E-81 T 13-09-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 Gene3D G3DSA:2.40.50.100 1 96 1.1E-26 T 13-09-2016 PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 Gene3D G3DSA:3.30.559.10 174 407 1.7E-92 T 13-09-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 PANTHER PTHR23151:SF47 3 409 8.1E-230 T 13-09-2016 PMA3_RS21255 65f08f8103da7ef509b55c9fe37272be 409 PANTHER PTHR23151 3 409 8.1E-230 T 13-09-2016 PMA3_RS01555 e2fc379073cea073b593339959edda0a 95 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 5 93 5.2E-38 T 13-09-2016 IPR014057 Addiction module antidote protein, HI1420 PMA3_RS01555 e2fc379073cea073b593339959edda0a 95 SUPERFAMILY SSF47413 28 91 1.28E-10 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS01555 e2fc379073cea073b593339959edda0a 95 Gene3D G3DSA:1.10.260.40 50 92 1.2E-8 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS01555 e2fc379073cea073b593339959edda0a 95 Pfam PF01381 Helix-turn-helix 50 91 7.0E-7 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS01555 e2fc379073cea073b593339959edda0a 95 PANTHER PTHR40275 1 93 6.9E-30 T 13-09-2016 PMA3_RS01555 e2fc379073cea073b593339959edda0a 95 PANTHER PTHR40275:SF1 1 93 6.9E-30 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF52777 1095 1285 1.08E-36 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF52777 1272 1529 7.34E-43 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:2.30.38.10 2312 2392 4.7E-21 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:2.30.38.10 3367 3445 2.6E-23 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:2.30.38.10 818 895 1.3E-22 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF56801 1956 2523 1.44E-145 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1045 1060 - T 13-09-2016 IPR006162 Phosphopantetheine attachment site PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1391 1545 3.0E-44 T 13-09-2016 IPR010060 Non-ribosomal peptide synthase PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:3.40.50.980 3047 3202 2.8E-54 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:3.40.50.980 1993 2146 1.3E-46 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:1.10.1200.10 3571 3635 2.9E-26 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:1.10.1200.10 1024 1090 5.8E-28 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:1.10.1200.10 2514 2577 1.2E-24 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 658 669 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:3.30.300.30 900 1023 3.5E-40 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:3.30.300.30 2397 2513 5.5E-39 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:3.30.300.30 3451 3570 3.2E-38 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF52777 235 480 9.89E-65 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:3.40.50.980 510 664 5.8E-50 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF52777 1550 1734 9.67E-41 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF00501 AMP-binding enzyme 519 905 1.6E-88 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF00501 AMP-binding enzyme 2001 2402 3.7E-86 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF00501 AMP-binding enzyme 3055 3456 3.7E-95 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SMART SM00823 Phosphopantetheine attachment site 2513 2579 5.6E-4 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SMART SM00823 Phosphopantetheine attachment site 3567 3636 0.02 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SMART SM00823 Phosphopantetheine attachment site 1021 1089 9.4E-4 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF56801 3012 3580 7.06E-157 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF52777 52 229 2.33E-49 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF47336 2503 2573 8.51E-17 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2138 2149 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF52777 1722 1968 6.23E-57 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3591 3606 - T 13-09-2016 IPR006162 Phosphopantetheine attachment site PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF52777 2775 3017 1.06E-56 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF47336 3560 3630 2.49E-17 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF47336 1014 1083 7.85E-19 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:3.40.50.980 665 817 2.3E-34 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:3.40.50.980 3203 3356 1.1E-44 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Gene3D G3DSA:3.40.50.980 2147 2311 1.2E-35 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF13745 HxxPF-repeated domain 2908 2999 1.3E-26 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF13745 HxxPF-repeated domain 370 463 2.4E-28 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3195 3206 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 PANTHER PTHR24095:SF173 689 1171 0.0 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 PANTHER PTHR24095 689 1171 0.0 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF52777 2597 2767 3.56E-46 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2534 2549 - T 13-09-2016 IPR006162 Phosphopantetheine attachment site PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF00668 Condensation domain 2593 2886 7.2E-71 T 13-09-2016 IPR001242 Condensation domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF00668 Condensation domain 49 348 7.6E-81 T 13-09-2016 IPR001242 Condensation domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF00668 Condensation domain 1101 1385 7.5E-56 T 13-09-2016 IPR001242 Condensation domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF00668 Condensation domain 1551 1836 4.6E-66 T 13-09-2016 IPR001242 Condensation domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF13193 AMP-binding enzyme C-terminal domain 913 995 2.3E-11 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF13193 AMP-binding enzyme C-terminal domain 3464 3541 6.8E-10 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF13193 AMP-binding enzyme C-terminal domain 2410 2484 2.9E-12 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 PANTHER PTHR24095 1530 3541 0.0 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF00550 Phosphopantetheine attachment site 2512 2573 1.5E-11 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF00550 Phosphopantetheine attachment site 3568 3630 1.7E-12 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 Pfam PF00550 Phosphopantetheine attachment site 1023 1084 1.6E-14 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 SUPERFAMILY SSF56801 475 1033 6.15E-146 T 13-09-2016 PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2020 2426 5.7E-126 T 13-09-2016 IPR010071 Amino acid adenylation domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3075 3479 2.5E-132 T 13-09-2016 IPR010071 Amino acid adenylation domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 538 929 1.7E-122 T 13-09-2016 IPR010071 Amino acid adenylation domain PMA3_RS20195 61aa0530605683d97ab6bd429ab2a33b 3657 PANTHER PTHR24095:SF173 1530 3541 0.0 T 13-09-2016 PMA3_RS24755 94c6cf613acc7100bf1dc80942089f4c 187 Pfam PF04542 Sigma-70 region 2 29 87 1.0E-11 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS24755 94c6cf613acc7100bf1dc80942089f4c 187 Pfam PF08281 Sigma-70, region 4 121 171 6.0E-17 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS24755 94c6cf613acc7100bf1dc80942089f4c 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 173 4.4E-23 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS24755 94c6cf613acc7100bf1dc80942089f4c 187 PANTHER PTHR30173:SF9 20 177 5.7E-34 T 13-09-2016 PMA3_RS24755 94c6cf613acc7100bf1dc80942089f4c 187 SUPERFAMILY SSF88659 96 177 2.43E-16 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS24755 94c6cf613acc7100bf1dc80942089f4c 187 SUPERFAMILY SSF88946 14 104 1.02E-13 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS24755 94c6cf613acc7100bf1dc80942089f4c 187 Gene3D G3DSA:1.10.1740.10 14 110 8.5E-13 T 13-09-2016 PMA3_RS24755 94c6cf613acc7100bf1dc80942089f4c 187 Gene3D G3DSA:1.10.10.10 113 177 1.6E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24755 94c6cf613acc7100bf1dc80942089f4c 187 PANTHER PTHR30173 20 177 5.7E-34 T 13-09-2016 PMA3_RS11150 ea3a372502cf2f3a85630179137a172a 338 Pfam PF11927 Protein of unknown function (DUF3445) 55 293 2.9E-56 T 13-09-2016 IPR021848 Protein of unknown function DUF3445 PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 105 161 9.7E-15 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.9E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 PANTHER PTHR30419 98 400 1.1E-82 T 13-09-2016 PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 SUPERFAMILY SSF53850 190 399 2.85E-36 T 13-09-2016 PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 PANTHER PTHR30419:SF10 98 400 1.1E-82 T 13-09-2016 PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 Gene3D G3DSA:1.10.10.10 8 81 3.8E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 Gene3D G3DSA:1.10.10.10 105 188 5.9E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 Pfam PF03466 LysR substrate binding domain 188 395 5.4E-33 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 Gene3D G3DSA:3.40.190.10 276 363 4.7E-12 T 13-09-2016 PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 Gene3D G3DSA:3.40.190.10 191 275 8.7E-12 T 13-09-2016 PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 SUPERFAMILY SSF46785 101 211 9.85E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14295 3eb2c0fae95b33bf7ac9b975d25e2fa1 402 SUPERFAMILY SSF46785 9 86 8.95E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.471 T 13-09-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Gene3D G3DSA:3.30.1490.20 687 744 3.3E-27 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Gene3D G3DSA:3.40.50.1380 938 1070 6.8E-42 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Pfam PF02142 MGS-like domain 959 1041 5.8E-19 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 SMART SM01096 424 547 1.8E-73 T 13-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 SMART SM00851 955 1041 2.4E-31 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.136 T 13-09-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Gene3D G3DSA:3.40.50.20 3 108 2.7E-45 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 13-09-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 PANTHER PTHR11405:SF5 1 1069 0.0 T 13-09-2016 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Gene3D G3DSA:3.30.1490.20 141 199 9.2E-27 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 SUPERFAMILY SSF52335 938 1069 4.84E-41 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Gene3D G3DSA:3.30.470.20 200 399 1.0E-74 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Gene3D G3DSA:3.30.470.20 745 934 4.0E-78 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 5.1E-38 T 13-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 SUPERFAMILY SSF56059 128 401 4.77E-109 T 13-09-2016 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 PANTHER PTHR11405 1 1069 0.0 T 13-09-2016 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 SUPERFAMILY SSF48108 396 554 5.1E-52 T 13-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Gene3D G3DSA:1.10.1030.10 400 538 1.2E-49 T 13-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.3E-66 T 13-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.3E-66 T 13-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.3E-66 T 13-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.3E-66 T 13-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.3E-66 T 13-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 2.3E-66 T 13-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.3E-66 T 13-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 SUPERFAMILY SSF52440 557 675 5.75E-50 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 SUPERFAMILY SSF56059 673 933 8.31E-105 T 13-09-2016 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Gene3D G3DSA:3.40.50.20 539 662 1.6E-61 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 7.6E-72 T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 6.8E-35 T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS25560 9eb72532e4a2a5b83fe9dd9433af289d 1073 SUPERFAMILY SSF52440 1 127 3.31E-50 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS14500 539a0ec1f809fa80ae1da987a4058082 90 Pfam PF03050 Transposase IS66 family 3 68 4.4E-17 T 13-09-2016 IPR004291 Transposase, IS66 PMA3_RS21010 c6b441e6f6e3c865f2f41ab307d8086d 624 Gene3D G3DSA:3.40.1130.10 426 570 1.8E-14 T 13-09-2016 PMA3_RS21010 c6b441e6f6e3c865f2f41ab307d8086d 624 Pfam PF01553 Acyltransferase 443 570 6.3E-22 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS21010 c6b441e6f6e3c865f2f41ab307d8086d 624 Gene3D G3DSA:1.20.1250.20 232 416 5.8E-11 T 13-09-2016 PMA3_RS21010 c6b441e6f6e3c865f2f41ab307d8086d 624 SMART SM00563 457 573 6.4E-28 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS21010 c6b441e6f6e3c865f2f41ab307d8086d 624 Gene3D G3DSA:1.20.1250.20 52 188 4.2E-4 T 13-09-2016 PMA3_RS21010 c6b441e6f6e3c865f2f41ab307d8086d 624 PANTHER PTHR10434 346 620 8.1E-149 T 13-09-2016 PMA3_RS21010 c6b441e6f6e3c865f2f41ab307d8086d 624 PANTHER PTHR10434:SF15 346 620 8.1E-149 T 13-09-2016 PMA3_RS21010 c6b441e6f6e3c865f2f41ab307d8086d 624 Pfam PF07690 Major Facilitator Superfamily 19 387 6.1E-15 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS21010 c6b441e6f6e3c865f2f41ab307d8086d 624 SUPERFAMILY SSF69593 393 574 1.31E-27 T 13-09-2016 PMA3_RS21010 c6b441e6f6e3c865f2f41ab307d8086d 624 SUPERFAMILY SSF103473 24 426 8.76E-23 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS10740 373a58dda13fe6da9c4d2e3099e4a653 312 Pfam PF04199 Putative cyclase 63 248 6.0E-26 T 13-09-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 PMA3_RS10740 373a58dda13fe6da9c4d2e3099e4a653 312 PANTHER PTHR34861 31 312 2.0E-28 T 13-09-2016 PMA3_RS10740 373a58dda13fe6da9c4d2e3099e4a653 312 Gene3D G3DSA:3.50.30.50 58 311 1.1E-26 T 13-09-2016 PMA3_RS10740 373a58dda13fe6da9c4d2e3099e4a653 312 SUPERFAMILY SSF102198 58 311 1.03E-21 T 13-09-2016 PMA3_RS21570 ce3af3f3e9f047da3ad5e6903d2717bb 262 PANTHER PTHR13696:SF69 1 254 1.8E-140 T 13-09-2016 PMA3_RS21570 ce3af3f3e9f047da3ad5e6903d2717bb 262 PANTHER PTHR13696 1 254 1.8E-140 T 13-09-2016 PMA3_RS21570 ce3af3f3e9f047da3ad5e6903d2717bb 262 SUPERFAMILY SSF52540 1 254 7.21E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21570 ce3af3f3e9f047da3ad5e6903d2717bb 262 Gene3D G3DSA:3.40.50.300 1 254 1.8E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21570 ce3af3f3e9f047da3ad5e6903d2717bb 262 Pfam PF13614 AAA domain 1 179 1.8E-42 T 13-09-2016 IPR025669 AAA domain PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 Gene3D G3DSA:3.40.50.170 90 281 4.0E-53 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 PIRSF PIRSF036480 5 285 4.5E-100 T 13-09-2016 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 PANTHER PTHR10520:SF7 6 279 4.8E-142 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 PANTHER PTHR10520 6 279 4.8E-142 T 13-09-2016 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 SUPERFAMILY SSF55021 7 84 1.28E-9 T 13-09-2016 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 285 4.3E-90 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 285 44.079 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 Gene3D G3DSA:3.30.70.260 6 84 3.0E-13 T 13-09-2016 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 SUPERFAMILY SSF53328 91 284 2.22E-58 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 237 259 1.1E-48 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 91 113 1.1E-48 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 113 140 1.1E-48 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 259 284 1.1E-48 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.1E-48 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 1.1E-48 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS27940 1d9887469f22d303b2dcaddfcba53145 285 Pfam PF00551 Formyl transferase 91 266 5.6E-37 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS04205 a0d3b2ab1010a5731f94e2a994f75552 386 PANTHER PTHR30469:SF0 1 383 1.4E-110 T 13-09-2016 PMA3_RS04205 a0d3b2ab1010a5731f94e2a994f75552 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 372 2.1E-70 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS04205 a0d3b2ab1010a5731f94e2a994f75552 386 PANTHER PTHR30469 1 383 1.4E-110 T 13-09-2016 PMA3_RS04205 a0d3b2ab1010a5731f94e2a994f75552 386 Gene3D G3DSA:2.40.50.100 174 208 2.4E-20 T 13-09-2016 PMA3_RS04205 a0d3b2ab1010a5731f94e2a994f75552 386 Gene3D G3DSA:2.40.50.100 66 99 2.4E-20 T 13-09-2016 PMA3_RS04205 a0d3b2ab1010a5731f94e2a994f75552 386 SUPERFAMILY SSF111369 57 298 2.62E-52 T 13-09-2016 PMA3_RS04205 a0d3b2ab1010a5731f94e2a994f75552 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 293 1.4E-14 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 PANTHER PTHR11019 71 315 3.2E-77 T 13-09-2016 PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 SUPERFAMILY SSF46689 266 315 3.45E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 Gene3D G3DSA:1.10.10.60 267 314 2.5E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 SMART SM00342 229 312 1.8E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 Gene3D G3DSA:1.10.10.60 220 266 6.0E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 Pfam PF01965 DJ-1/PfpI family 2 173 1.7E-26 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 Gene3D G3DSA:3.40.50.880 3 219 3.8E-60 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 SUPERFAMILY SSF46689 215 263 7.17E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 PANTHER PTHR11019:SF58 71 315 3.2E-77 T 13-09-2016 PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 SUPERFAMILY SSF52317 1 192 2.21E-54 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS17735 c4073faaaedc7e233c942e36c8eb74a9 316 Pfam PF12833 Helix-turn-helix domain 236 313 2.7E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18635 cb02b78c55c69b03f2ec02e4d361b9bc 461 Pfam PF06742 Protein of unknown function (DUF1214) 327 438 6.2E-37 T 13-09-2016 IPR010621 Domain of unknown function DUF1214 PMA3_RS18635 cb02b78c55c69b03f2ec02e4d361b9bc 461 SUPERFAMILY SSF160935 19 458 6.67E-124 T 13-09-2016 PMA3_RS18635 cb02b78c55c69b03f2ec02e4d361b9bc 461 PANTHER PTHR36509 7 461 1.7E-120 T 13-09-2016 PMA3_RS18635 cb02b78c55c69b03f2ec02e4d361b9bc 461 Gene3D G3DSA:2.60.40.1610 71 189 3.7E-20 T 13-09-2016 IPR010679 Domain of unknown function DUF1254 PMA3_RS18635 cb02b78c55c69b03f2ec02e4d361b9bc 461 Gene3D G3DSA:2.60.120.600 282 458 3.8E-56 T 13-09-2016 IPR010621 Domain of unknown function DUF1214 PMA3_RS18635 cb02b78c55c69b03f2ec02e4d361b9bc 461 Gene3D G3DSA:1.10.3360.10 190 258 8.9E-8 T 13-09-2016 IPR023289 VPA0735-like domain PMA3_RS18635 cb02b78c55c69b03f2ec02e4d361b9bc 461 PANTHER PTHR36509:SF2 7 461 1.7E-120 T 13-09-2016 PMA3_RS18635 cb02b78c55c69b03f2ec02e4d361b9bc 461 Pfam PF06863 Protein of unknown function (DUF1254) 58 190 2.4E-41 T 13-09-2016 IPR010679 Domain of unknown function DUF1254 PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 Pfam PF03466 LysR substrate binding domain 88 290 9.9E-43 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 Gene3D G3DSA:1.10.10.10 2 86 6.3E-32 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 SUPERFAMILY SSF53850 90 294 5.32E-42 T 13-09-2016 PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 PANTHER PTHR30346 1 299 1.2E-96 T 13-09-2016 PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 Gene3D G3DSA:3.40.190.10 89 174 4.9E-18 T 13-09-2016 PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 Gene3D G3DSA:3.40.190.10 175 260 6.0E-16 T 13-09-2016 PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 SUPERFAMILY SSF46785 3 110 2.53E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.0E-25 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 PANTHER PTHR30346:SF3 1 299 1.2E-96 T 13-09-2016 PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-12 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-12 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12920 63f02ffa45307ee322630c6813c641f3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-12 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 Gene3D G3DSA:3.40.50.300 311 518 2.3E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 Gene3D G3DSA:3.40.50.300 2 262 5.2E-45 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 SUPERFAMILY SSF52540 3 229 6.79E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 SUPERFAMILY SSF52540 288 519 1.33E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 PANTHER PTHR19211:SF38 1 517 0.0 T 13-09-2016 PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 Pfam PF12848 ABC transporter 216 290 2.5E-20 T 13-09-2016 IPR032781 ABC-transporter extension domain PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 SMART SM00382 336 502 1.1E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 SMART SM00382 18 237 8.7E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 PANTHER PTHR19211 1 517 0.0 T 13-09-2016 PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 Pfam PF00005 ABC transporter 328 457 3.9E-21 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS13335 1be4f9dc2633ba4da27f396f50925336 521 Pfam PF00005 ABC transporter 10 176 7.2E-20 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 Pfam PF02954 Bacterial regulatory protein, Fis family 414 453 1.2E-4 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 174 187 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 SMART SM00091 6 71 2.3E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 Pfam PF00989 PAS fold 8 111 5.3E-13 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 SUPERFAMILY SSF55785 7 109 5.23E-15 T 13-09-2016 IPR000014 PAS domain PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 363 372 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 Gene3D G3DSA:3.40.50.300 151 323 7.4E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 Gene3D G3DSA:1.10.10.60 406 453 7.4E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 Gene3D G3DSA:1.10.8.60 324 397 4.5E-21 T 13-09-2016 PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 118 4.5E-14 T 13-09-2016 IPR000014 PAS domain PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 SMART SM00382 170 314 5.0E-13 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 Pfam PF00158 Sigma-54 interaction domain 154 317 1.3E-62 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 SUPERFAMILY SSF46689 405 453 5.02E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 SUPERFAMILY SSF52540 155 393 5.94E-65 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 PANTHER PTHR32071 94 454 1.9E-128 T 13-09-2016 PMA3_RS09715 81901c4404831a30e09c3ca97b43100e 457 Gene3D G3DSA:3.30.450.20 7 112 3.7E-16 T 13-09-2016 PMA3_RS09915 c588eaea0ef931c4dee91097dc78c137 146 PANTHER PTHR30574 5 142 2.5E-22 T 13-09-2016 PMA3_RS09915 c588eaea0ef931c4dee91097dc78c137 146 PANTHER PTHR30574:SF1 5 142 2.5E-22 T 13-09-2016 PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 Gene3D G3DSA:1.10.3810.10 166 337 5.4E-67 T 13-09-2016 PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 SUPERFAMILY SSF56601 317 339 5.83E-117 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 SUPERFAMILY SSF56601 368 757 5.83E-117 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 Gene3D G3DSA:3.40.710.10 338 750 3.5E-111 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 PANTHER PTHR32282:SF11 149 748 1.2E-257 T 13-09-2016 PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 SUPERFAMILY SSF53955 161 357 5.06E-68 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 Pfam PF00912 Transglycosylase 166 334 4.4E-59 T 13-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 Gene3D G3DSA:1.20.5.100 11 51 6.9E-8 T 13-09-2016 PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 670 1.0E-17 T 13-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 Gene3D G3DSA:3.30.2060.10 67 154 1.2E-23 T 13-09-2016 PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 PANTHER PTHR32282 149 748 1.2E-257 T 13-09-2016 PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 PIRSF PIRSF002799 2 774 0.0 T 13-09-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 24 748 1.6E-304 T 13-09-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS03560 46273e388527d1c628557cddd1b0ddfa 774 Pfam PF14814 Bifunctional transglycosylase second domain 69 152 8.8E-22 T 13-09-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS07990 afa38e01c448f6eaefe6439c92f792e6 257 SUPERFAMILY SSF53850 1 254 2.65E-64 T 13-09-2016 PMA3_RS07990 afa38e01c448f6eaefe6439c92f792e6 257 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 250 3.2E-82 T 13-09-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 PMA3_RS07990 afa38e01c448f6eaefe6439c92f792e6 257 Gene3D G3DSA:3.40.190.10 112 210 4.3E-24 T 13-09-2016 PMA3_RS07990 afa38e01c448f6eaefe6439c92f792e6 257 Gene3D G3DSA:3.40.190.10 21 110 1.9E-42 T 13-09-2016 PMA3_RS07990 afa38e01c448f6eaefe6439c92f792e6 257 Gene3D G3DSA:3.40.190.10 212 254 1.9E-42 T 13-09-2016 PMA3_RS07990 afa38e01c448f6eaefe6439c92f792e6 257 PANTHER PTHR18966 20 254 1.5E-61 T 13-09-2016 PMA3_RS07990 afa38e01c448f6eaefe6439c92f792e6 257 SMART SM00062 24 253 1.2E-66 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS07990 afa38e01c448f6eaefe6439c92f792e6 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 251 2.1E-56 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS07990 afa38e01c448f6eaefe6439c92f792e6 257 PANTHER PTHR18966:SF152 20 254 1.5E-61 T 13-09-2016 PMA3_RS08180 a833e379ed9233411834533fa0d8e681 376 Pfam PF00795 Carbon-nitrogen hydrolase 148 289 5.6E-11 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS08180 a833e379ed9233411834533fa0d8e681 376 PANTHER PTHR23088:SF15 146 293 1.0E-54 T 13-09-2016 PMA3_RS08180 a833e379ed9233411834533fa0d8e681 376 PANTHER PTHR23088:SF15 39 110 1.0E-54 T 13-09-2016 PMA3_RS08180 a833e379ed9233411834533fa0d8e681 376 SUPERFAMILY SSF56317 66 110 4.32E-26 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS08180 a833e379ed9233411834533fa0d8e681 376 SUPERFAMILY SSF56317 150 285 4.32E-26 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS08180 a833e379ed9233411834533fa0d8e681 376 Gene3D G3DSA:3.60.110.10 149 288 4.1E-28 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS08180 a833e379ed9233411834533fa0d8e681 376 Gene3D G3DSA:3.60.110.10 65 106 4.1E-28 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS08180 a833e379ed9233411834533fa0d8e681 376 PANTHER PTHR23088 39 110 1.0E-54 T 13-09-2016 PMA3_RS08180 a833e379ed9233411834533fa0d8e681 376 PANTHER PTHR23088 146 293 1.0E-54 T 13-09-2016 PMA3_RS27400 85ca0072760c773afd861ffa1367d2fb 483 PANTHER PTHR21666:SF221 210 479 5.7E-73 T 13-09-2016 PMA3_RS27400 85ca0072760c773afd861ffa1367d2fb 483 Pfam PF01551 Peptidase family M23 345 441 1.4E-33 T 13-09-2016 IPR016047 Peptidase M23 PMA3_RS27400 85ca0072760c773afd861ffa1367d2fb 483 SUPERFAMILY SSF51261 193 442 4.92E-74 T 13-09-2016 IPR011055 Duplicated hybrid motif PMA3_RS27400 85ca0072760c773afd861ffa1367d2fb 483 Gene3D G3DSA:2.70.70.10 297 442 2.0E-47 T 13-09-2016 PMA3_RS27400 85ca0072760c773afd861ffa1367d2fb 483 Pfam PF04225 Opacity-associated protein A LysM-like domain 121 198 1.8E-7 T 13-09-2016 IPR007340 Opacity-associated protein A PMA3_RS27400 85ca0072760c773afd861ffa1367d2fb 483 PANTHER PTHR21666 210 479 5.7E-73 T 13-09-2016 PMA3_RS13525 c0f19b5e848dd24e68f980081c1e040c 211 SUPERFAMILY SSF46626 124 208 1.6E-18 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13525 c0f19b5e848dd24e68f980081c1e040c 211 PANTHER PTHR33751 22 209 1.6E-78 T 13-09-2016 PMA3_RS13525 c0f19b5e848dd24e68f980081c1e040c 211 Gene3D G3DSA:1.10.760.10 129 209 1.1E-25 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13525 c0f19b5e848dd24e68f980081c1e040c 211 PANTHER PTHR33751:SF2 22 209 1.6E-78 T 13-09-2016 PMA3_RS13525 c0f19b5e848dd24e68f980081c1e040c 211 Pfam PF00034 Cytochrome c 23 91 2.9E-5 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13525 c0f19b5e848dd24e68f980081c1e040c 211 Pfam PF00034 Cytochrome c 140 209 3.6E-8 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13525 c0f19b5e848dd24e68f980081c1e040c 211 Gene3D G3DSA:1.10.760.10 18 105 1.8E-23 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13525 c0f19b5e848dd24e68f980081c1e040c 211 PIRSF PIRSF000005 1 211 7.7E-61 T 13-09-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 PMA3_RS13525 c0f19b5e848dd24e68f980081c1e040c 211 SUPERFAMILY SSF46626 19 102 1.01E-18 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS11765 f08927758d77faf369d6ca35107dfbb7 538 PANTHER PTHR24096:SF214 11 529 7.9E-164 T 13-09-2016 PMA3_RS11765 f08927758d77faf369d6ca35107dfbb7 538 Gene3D G3DSA:3.30.300.30 436 534 2.6E-32 T 13-09-2016 PMA3_RS11765 f08927758d77faf369d6ca35107dfbb7 538 PANTHER PTHR24096 11 529 7.9E-164 T 13-09-2016 PMA3_RS11765 f08927758d77faf369d6ca35107dfbb7 538 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS11765 f08927758d77faf369d6ca35107dfbb7 538 Gene3D G3DSA:3.40.50.980 16 193 1.8E-34 T 13-09-2016 PMA3_RS11765 f08927758d77faf369d6ca35107dfbb7 538 SUPERFAMILY SSF56801 11 534 5.23E-150 T 13-09-2016 PMA3_RS11765 f08927758d77faf369d6ca35107dfbb7 538 Gene3D G3DSA:2.30.38.10 356 429 3.4E-26 T 13-09-2016 PMA3_RS11765 f08927758d77faf369d6ca35107dfbb7 538 Pfam PF00501 AMP-binding enzyme 24 438 6.1E-96 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS11765 f08927758d77faf369d6ca35107dfbb7 538 Gene3D G3DSA:3.40.50.980 194 355 4.5E-39 T 13-09-2016 PMA3_RS11765 f08927758d77faf369d6ca35107dfbb7 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 447 522 4.0E-20 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS14390 51ca345ee95eae347aa771365dfac75e 394 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 47 131 1.1E-6 T 13-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PMA3_RS14390 51ca345ee95eae347aa771365dfac75e 394 SUPERFAMILY SSF54826 3 131 3.91E-13 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS14390 51ca345ee95eae347aa771365dfac75e 394 Gene3D G3DSA:3.20.20.120 138 387 4.1E-43 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS14390 51ca345ee95eae347aa771365dfac75e 394 Gene3D G3DSA:3.30.390.10 1 137 7.0E-21 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS14390 51ca345ee95eae347aa771365dfac75e 394 Pfam PF13378 Enolase C-terminal domain-like 165 380 3.4E-34 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS14390 51ca345ee95eae347aa771365dfac75e 394 SUPERFAMILY SSF51604 131 390 1.33E-43 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS14390 51ca345ee95eae347aa771365dfac75e 394 PANTHER PTHR13794 1 392 3.2E-37 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS14390 51ca345ee95eae347aa771365dfac75e 394 SMART SM00922 156 257 1.3E-7 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS07025 d0ce7d80a47aae0ce8087f670e5eeba6 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 9.0E-48 T 13-09-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial PMA3_RS07025 d0ce7d80a47aae0ce8087f670e5eeba6 217 Gene3D G3DSA:1.20.1440.100 15 80 1.2E-21 T 13-09-2016 PMA3_RS07025 d0ce7d80a47aae0ce8087f670e5eeba6 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 2.0E-33 T 13-09-2016 PMA3_RS07025 d0ce7d80a47aae0ce8087f670e5eeba6 217 PANTHER PTHR10000 42 213 3.2E-81 T 13-09-2016 PMA3_RS07025 d0ce7d80a47aae0ce8087f670e5eeba6 217 Gene3D G3DSA:3.40.50.1000 81 216 3.7E-45 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS07025 d0ce7d80a47aae0ce8087f670e5eeba6 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 189 5.2E-28 T 13-09-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PMA3_RS07025 d0ce7d80a47aae0ce8087f670e5eeba6 217 PANTHER PTHR10000:SF17 42 213 3.2E-81 T 13-09-2016 PMA3_RS07025 d0ce7d80a47aae0ce8087f670e5eeba6 217 SUPERFAMILY SSF56784 2 211 1.54E-31 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS19870 65f9f056cc7ca4ba834231804c720654 146 PANTHER PTHR11911 16 146 2.5E-36 T 13-09-2016 PMA3_RS19870 65f9f056cc7ca4ba834231804c720654 146 Gene3D G3DSA:3.10.580.10 15 128 2.2E-32 T 13-09-2016 PMA3_RS19870 65f9f056cc7ca4ba834231804c720654 146 Pfam PF00571 CBS domain 15 64 3.3E-10 T 13-09-2016 IPR000644 CBS domain PMA3_RS19870 65f9f056cc7ca4ba834231804c720654 146 Pfam PF00571 CBS domain 75 126 5.0E-13 T 13-09-2016 IPR000644 CBS domain PMA3_RS19870 65f9f056cc7ca4ba834231804c720654 146 SUPERFAMILY SSF54631 16 144 1.64E-33 T 13-09-2016 PMA3_RS19870 65f9f056cc7ca4ba834231804c720654 146 SMART SM00116 17 64 2.4E-6 T 13-09-2016 IPR000644 CBS domain PMA3_RS19870 65f9f056cc7ca4ba834231804c720654 146 SMART SM00116 82 129 4.9E-11 T 13-09-2016 IPR000644 CBS domain PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 PANTHER PTHR30537:SF26 2 299 2.6E-62 T 13-09-2016 PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 PANTHER PTHR30537 2 299 2.6E-62 T 13-09-2016 PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 3.5E-22 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 Gene3D G3DSA:3.40.190.10 97 178 1.9E-20 T 13-09-2016 PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 Gene3D G3DSA:1.10.10.10 9 91 4.8E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.0E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.0E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.0E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 Gene3D G3DSA:3.40.190.10 179 257 3.7E-12 T 13-09-2016 PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 SUPERFAMILY SSF53850 92 289 4.52E-26 T 13-09-2016 PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 SUPERFAMILY SSF46785 8 114 7.37E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17205 3acc721798a85fa236e165b535de5c5f 300 Pfam PF03466 LysR substrate binding domain 93 275 1.1E-24 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 Pfam PF03466 LysR substrate binding domain 91 291 1.4E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 SUPERFAMILY SSF53850 95 295 1.07E-37 T 13-09-2016 PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 Gene3D G3DSA:1.10.10.10 2 82 2.1E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 PANTHER PTHR30537:SF15 1 295 3.5E-149 T 13-09-2016 PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 Gene3D G3DSA:3.40.190.10 178 261 1.6E-35 T 13-09-2016 PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 Gene3D G3DSA:3.40.190.10 95 177 7.8E-9 T 13-09-2016 PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 2.4E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 PANTHER PTHR30537 1 295 3.5E-149 T 13-09-2016 PMA3_RS00270 aa2379c5115163afbcbe8a62068d79b3 299 SUPERFAMILY SSF46785 3 81 2.21E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20480 a2f62f02ae85847500d23f7f4cc2e4b9 494 PANTHER PTHR16943 1 494 2.5E-250 T 13-09-2016 IPR005656 MmgE/PrpD GO:0016829 PMA3_RS20480 a2f62f02ae85847500d23f7f4cc2e4b9 494 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 14 494 7.9E-267 T 13-09-2016 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79|UniPathway: UPA00946 PMA3_RS20480 a2f62f02ae85847500d23f7f4cc2e4b9 494 SUPERFAMILY SSF103378 13 493 6.41E-149 T 13-09-2016 IPR005656 MmgE/PrpD GO:0016829 PMA3_RS20480 a2f62f02ae85847500d23f7f4cc2e4b9 494 PANTHER PTHR16943:SF19 1 494 2.5E-250 T 13-09-2016 PMA3_RS20480 a2f62f02ae85847500d23f7f4cc2e4b9 494 Gene3D G3DSA:3.30.1330.120 300 437 2.8E-51 T 13-09-2016 PMA3_RS20480 a2f62f02ae85847500d23f7f4cc2e4b9 494 Pfam PF03972 MmgE/PrpD family 18 477 1.9E-150 T 13-09-2016 IPR005656 MmgE/PrpD GO:0016829 PMA3_RS05885 c341dd6aef26596d97182253a994b268 224 PANTHER PTHR30037 174 206 1.4E-108 T 13-09-2016 PMA3_RS05885 c341dd6aef26596d97182253a994b268 224 PANTHER PTHR30037:SF3 174 206 1.4E-108 T 13-09-2016 PMA3_RS05885 c341dd6aef26596d97182253a994b268 224 SUPERFAMILY SSF48150 37 182 4.08E-36 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS05885 c341dd6aef26596d97182253a994b268 224 PANTHER PTHR30037 1 156 1.4E-108 T 13-09-2016 PMA3_RS05885 c341dd6aef26596d97182253a994b268 224 PANTHER PTHR30037:SF3 1 156 1.4E-108 T 13-09-2016 PMA3_RS05885 c341dd6aef26596d97182253a994b268 224 Gene3D G3DSA:1.10.340.30 38 141 8.8E-27 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS05885 c341dd6aef26596d97182253a994b268 224 Pfam PF03352 Methyladenine glycosylase 39 130 7.8E-18 T 13-09-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 13-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 867 0.0 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 615 659 7.6E-6 T 13-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 423 579 7.4E-8 T 13-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PANTHER PTHR11946:SF7 244 581 0.0 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PANTHER PTHR11946:SF7 1 206 0.0 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Gene3D G3DSA:3.90.740.10 223 429 1.8E-53 T 13-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 SUPERFAMILY SSF52374 5 226 1.31E-147 T 13-09-2016 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 SUPERFAMILY SSF52374 421 675 1.31E-147 T 13-09-2016 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 1.2E-69 T 13-09-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 SUPERFAMILY SSF50677 226 419 1.78E-49 T 13-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Gene3D G3DSA:1.10.730.10 656 803 1.5E-42 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Gene3D G3DSA:3.40.50.620 4 222 8.5E-153 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Gene3D G3DSA:3.40.50.620 430 580 8.5E-153 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Gene3D G3DSA:3.40.50.620 626 655 8.5E-153 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PANTHER PTHR11946:SF7 626 868 0.0 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 2.1E-51 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 531 553 2.1E-51 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.1E-51 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.1E-51 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 564 574 2.1E-51 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 492 510 2.1E-51 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.1E-51 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Pfam PF09334 tRNA synthetases class I (M) 39 171 5.9E-20 T 13-09-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PANTHER PTHR11946 244 581 0.0 T 13-09-2016 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PANTHER PTHR11946 1 206 0.0 T 13-09-2016 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 SUPERFAMILY SSF47323 670 866 2.06E-36 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Pfam PF08264 Anticodon-binding domain of tRNA 707 829 1.1E-15 T 13-09-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 867 23.383 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS02680 14127bd6d363f5bda3f82567387c6d89 868 PANTHER PTHR11946 626 868 0.0 T 13-09-2016 PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 PANTHER PTHR33121:SF13 245 544 5.9E-81 T 13-09-2016 PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 PANTHER PTHR33121 245 544 5.9E-81 T 13-09-2016 PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 Pfam PF00563 EAL domain 298 533 1.1E-74 T 13-09-2016 IPR001633 EAL domain PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 PANTHER PTHR33121:SF13 132 139 5.9E-81 T 13-09-2016 PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 SUPERFAMILY SSF141868 297 543 1.96E-86 T 13-09-2016 IPR001633 EAL domain PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 SMART SM00267 113 282 7.3E-34 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 PANTHER PTHR33121 132 139 5.9E-81 T 13-09-2016 PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 SMART SM00052 292 538 1.9E-113 T 13-09-2016 IPR001633 EAL domain PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 SUPERFAMILY SSF55073 129 284 3.45E-35 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 Gene3D G3DSA:3.30.70.270 126 290 1.1E-42 T 13-09-2016 PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 Pfam PF00990 Diguanylate cyclase, GGDEF domain 124 275 2.7E-30 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 Gene3D G3DSA:3.20.20.450 296 543 1.1E-95 T 13-09-2016 IPR001633 EAL domain PMA3_RS29380 a2d6036724b51bd0915b7a3a0d716c67 557 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 121 274 2.8E-23 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 Gene3D G3DSA:3.40.50.720 12 252 6.4E-71 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PANTHER PTHR24314:SF12 14 258 1.2E-64 T 13-09-2016 PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PANTHER PTHR24314 14 258 1.2E-64 T 13-09-2016 PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.4E-35 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.4E-35 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.4E-35 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 3.4E-35 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.4E-35 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.4E-35 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 251 4.3E-67 T 13-09-2016 PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 5.3E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 5.3E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 5.3E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 SUPERFAMILY SSF51735 12 251 1.88E-72 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09090 c2a0d9f9d4d44377576dd678046baa91 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS16225 1a41852f5fd8e82e362129ec126316ba 156 PANTHER PTHR10094 18 142 7.0E-48 T 13-09-2016 PMA3_RS16225 1a41852f5fd8e82e362129ec126316ba 156 PANTHER PTHR10094:SF16 18 142 7.0E-48 T 13-09-2016 PMA3_RS16225 1a41852f5fd8e82e362129ec126316ba 156 Gene3D G3DSA:3.30.1050.10 62 134 1.2E-11 T 13-09-2016 IPR003033 SCP2 sterol-binding domain PMA3_RS16225 1a41852f5fd8e82e362129ec126316ba 156 Pfam PF02036 SCP-2 sterol transfer family 35 130 1.2E-18 T 13-09-2016 IPR003033 SCP2 sterol-binding domain PMA3_RS16225 1a41852f5fd8e82e362129ec126316ba 156 SUPERFAMILY SSF55718 42 136 5.65E-20 T 13-09-2016 IPR003033 SCP2 sterol-binding domain PMA3_RS16225 1a41852f5fd8e82e362129ec126316ba 156 PIRSF PIRSF025550 1 155 4.3E-56 T 13-09-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT PMA3_RS26600 bbcf9afaceb6123f374ca252469c980d 164 Pfam PF02410 Ribosomal silencing factor during starvation 39 133 2.9E-29 T 13-09-2016 PMA3_RS26600 bbcf9afaceb6123f374ca252469c980d 164 PANTHER PTHR21043 28 136 1.1E-42 T 13-09-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PMA3_RS26600 bbcf9afaceb6123f374ca252469c980d 164 Gene3D G3DSA:3.30.460.10 33 136 6.9E-39 T 13-09-2016 PMA3_RS26600 bbcf9afaceb6123f374ca252469c980d 164 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 36 133 2.0E-36 T 13-09-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PMA3_RS26600 bbcf9afaceb6123f374ca252469c980d 164 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 32 134 24.333 T 13-09-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PMA3_RS26600 bbcf9afaceb6123f374ca252469c980d 164 SUPERFAMILY SSF81301 33 138 6.21E-38 T 13-09-2016 PMA3_RS17715 4f9af6e5389dd734960e3d21398b52ed 306 SUPERFAMILY SSF46785 7 89 9.52E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17715 4f9af6e5389dd734960e3d21398b52ed 306 SUPERFAMILY SSF53850 93 295 6.88E-32 T 13-09-2016 PMA3_RS17715 4f9af6e5389dd734960e3d21398b52ed 306 Gene3D G3DSA:3.40.190.10 93 176 3.5E-23 T 13-09-2016 PMA3_RS17715 4f9af6e5389dd734960e3d21398b52ed 306 Gene3D G3DSA:3.40.190.10 273 300 3.5E-23 T 13-09-2016 PMA3_RS17715 4f9af6e5389dd734960e3d21398b52ed 306 Gene3D G3DSA:3.40.190.10 184 268 1.3E-21 T 13-09-2016 PMA3_RS17715 4f9af6e5389dd734960e3d21398b52ed 306 PANTHER PTHR30118:SF8 1 300 2.3E-99 T 13-09-2016 PMA3_RS17715 4f9af6e5389dd734960e3d21398b52ed 306 Pfam PF03466 LysR substrate binding domain 98 294 2.7E-17 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS17715 4f9af6e5389dd734960e3d21398b52ed 306 Gene3D G3DSA:1.10.10.10 2 89 1.6E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17715 4f9af6e5389dd734960e3d21398b52ed 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.5E-14 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17715 4f9af6e5389dd734960e3d21398b52ed 306 PANTHER PTHR30118 1 300 2.3E-99 T 13-09-2016 PMA3_RS09620 b31a709f6d024e1519b9e8aeadc039e6 212 Gene3D G3DSA:2.30.110.10 1 198 1.9E-66 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS09620 b31a709f6d024e1519b9e8aeadc039e6 212 PANTHER PTHR35802 2 208 1.5E-57 T 13-09-2016 PMA3_RS09620 b31a709f6d024e1519b9e8aeadc039e6 212 Pfam PF04299 Putative FMN-binding domain 1 168 4.2E-59 T 13-09-2016 IPR007396 Transcriptional regulator PAI 2-type PMA3_RS09620 b31a709f6d024e1519b9e8aeadc039e6 212 SUPERFAMILY SSF50475 15 189 2.4E-35 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS09620 b31a709f6d024e1519b9e8aeadc039e6 212 PANTHER PTHR35802:SF1 2 208 1.5E-57 T 13-09-2016 PMA3_RS09620 b31a709f6d024e1519b9e8aeadc039e6 212 PIRSF PIRSF010372 1 211 7.9E-73 T 13-09-2016 IPR007396 Transcriptional regulator PAI 2-type PMA3_RS16740 91238eec5fea0e67ea37481b3845a983 392 PANTHER PTHR11808:SF15 2 392 2.4E-202 T 13-09-2016 PMA3_RS16740 91238eec5fea0e67ea37481b3845a983 392 PIRSF PIRSF001434 1 392 8.2E-147 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS16740 91238eec5fea0e67ea37481b3845a983 392 SUPERFAMILY SSF53383 13 390 9.18E-116 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS16740 91238eec5fea0e67ea37481b3845a983 392 Gene3D G3DSA:3.90.1150.10 256 391 4.3E-58 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS16740 91238eec5fea0e67ea37481b3845a983 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 389 6.5E-153 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS16740 91238eec5fea0e67ea37481b3845a983 392 PANTHER PTHR11808 2 392 2.4E-202 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS16740 91238eec5fea0e67ea37481b3845a983 392 Gene3D G3DSA:3.40.640.10 13 255 3.6E-88 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS16740 91238eec5fea0e67ea37481b3845a983 392 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS20755 4012ecf19ef8b07faa5bb3f7693caf97 493 SMART SM00304 163 216 5.3E-8 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS20755 4012ecf19ef8b07faa5bb3f7693caf97 493 SMART SM00304 217 269 110.0 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS20755 4012ecf19ef8b07faa5bb3f7693caf97 493 SMART SM00283 231 492 6.9E-69 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS20755 4012ecf19ef8b07faa5bb3f7693caf97 493 SUPERFAMILY SSF58104 184 493 2.62E-77 T 13-09-2016 PMA3_RS20755 4012ecf19ef8b07faa5bb3f7693caf97 493 PANTHER PTHR32089 131 493 3.8E-127 T 13-09-2016 PMA3_RS20755 4012ecf19ef8b07faa5bb3f7693caf97 493 Pfam PF00672 HAMP domain 145 209 6.1E-10 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS20755 4012ecf19ef8b07faa5bb3f7693caf97 493 Gene3D G3DSA:1.10.287.950 246 463 1.7E-56 T 13-09-2016 PMA3_RS20755 4012ecf19ef8b07faa5bb3f7693caf97 493 PANTHER PTHR32089:SF34 131 493 3.8E-127 T 13-09-2016 PMA3_RS20755 4012ecf19ef8b07faa5bb3f7693caf97 493 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 284 489 6.2E-46 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS05905 7a0842f247018476f191df96fd05b0f9 155 PANTHER PTHR10681:SF107 27 152 9.5E-26 T 13-09-2016 PMA3_RS05905 7a0842f247018476f191df96fd05b0f9 155 Gene3D G3DSA:3.40.30.10 3 151 1.2E-31 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS05905 7a0842f247018476f191df96fd05b0f9 155 ProSitePatterns PS00194 Thioredoxin family active site. 44 62 - T 13-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PMA3_RS05905 7a0842f247018476f191df96fd05b0f9 155 Pfam PF00578 AhpC/TSA family 27 133 1.3E-19 T 13-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS05905 7a0842f247018476f191df96fd05b0f9 155 SUPERFAMILY SSF52833 1 152 2.53E-30 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS05905 7a0842f247018476f191df96fd05b0f9 155 PANTHER PTHR10681 27 152 9.5E-26 T 13-09-2016 PMA3_RS14030 a1ef9be2e4241d00ac222a8aa81c1349 256 Pfam PF02633 Creatinine amidohydrolase 8 247 1.0E-52 T 13-09-2016 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 PMA3_RS14030 a1ef9be2e4241d00ac222a8aa81c1349 256 TIGRFAM TIGR04448 creatininase: creatininase 8 252 9.0E-114 T 13-09-2016 IPR031034 Creatinine amidohydrolase GO:0006601|GO:0006602|GO:0047789 KEGG: 00330+3.5.2.10|UniPathway: UPA00274 PMA3_RS14030 a1ef9be2e4241d00ac222a8aa81c1349 256 PANTHER PTHR35005 1 249 5.3E-36 T 13-09-2016 PMA3_RS14030 a1ef9be2e4241d00ac222a8aa81c1349 256 PANTHER PTHR35005:SF1 1 249 5.3E-36 T 13-09-2016 PMA3_RS14030 a1ef9be2e4241d00ac222a8aa81c1349 256 SUPERFAMILY SSF102215 4 249 7.85E-66 T 13-09-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 PMA3_RS14030 a1ef9be2e4241d00ac222a8aa81c1349 256 Gene3D G3DSA:3.40.50.10310 1 249 5.0E-70 T 13-09-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 SUPERFAMILY SSF47831 428 536 1.57E-26 T 13-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 832 850 - T 13-09-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Pfam PF00391 PEP-utilising enzyme, mobile domain 544 616 1.7E-21 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 PRINTS PR00107 Phosphocarrier protein signature 322 337 1.4E-7 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 PRINTS PR00107 Phosphocarrier protein signature 337 354 1.4E-7 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 PRINTS PR00107 Phosphocarrier protein signature 294 310 1.4E-7 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 PANTHER PTHR22931:SF15 302 935 1.4E-240 T 13-09-2016 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 405 951 7.0E-149 T 13-09-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Gene3D G3DSA:3.50.30.10 527 644 1.1E-34 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 285 365 2.1E-13 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Pfam PF00381 PTS HPr component phosphorylation site 286 366 3.9E-16 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 684 703 1.8E-19 T 13-09-2016 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 849 864 1.8E-19 T 13-09-2016 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 832 847 1.8E-19 T 13-09-2016 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 885 897 1.8E-19 T 13-09-2016 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 575 586 - T 13-09-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 SUPERFAMILY SSF55804 148 275 2.09E-15 T 13-09-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Gene3D G3DSA:3.20.20.60 645 951 1.0E-102 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 SUPERFAMILY SSF55594 285 372 6.15E-18 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 PANTHER PTHR22931 302 935 1.4E-240 T 13-09-2016 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 13-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 644 925 6.7E-104 T 13-09-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 140 1.5E-26 T 13-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Gene3D G3DSA:3.40.930.10 4 143 4.8E-35 T 13-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Gene3D G3DSA:3.40.930.10 148 276 6.2E-12 T 13-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 SUPERFAMILY SSF51621 645 934 2.04E-100 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Gene3D G3DSA:3.30.1340.10 284 372 2.5E-20 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 SUPERFAMILY SSF52009 518 631 1.44E-31 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 SUPERFAMILY SSF55804 4 141 1.31E-35 T 13-09-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Gene3D G3DSA:1.10.274.10 427 526 3.2E-30 T 13-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PMA3_RS25425 c59a49047c32075ae9d72ab0fde72ed0 953 Pfam PF05524 PEP-utilising enzyme, N-terminal 404 519 3.6E-23 T 13-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PMA3_RS09570 5307220256329df2c00ddfa9757da94e 294 Gene3D G3DSA:1.10.3720.10 83 289 6.3E-30 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09570 5307220256329df2c00ddfa9757da94e 294 SUPERFAMILY SSF161098 86 274 2.22E-30 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09570 5307220256329df2c00ddfa9757da94e 294 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 68 2.4E-8 T 13-09-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PMA3_RS09570 5307220256329df2c00ddfa9757da94e 294 PANTHER PTHR30465:SF10 7 293 6.9E-111 T 13-09-2016 PMA3_RS09570 5307220256329df2c00ddfa9757da94e 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 291 2.1E-29 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09570 5307220256329df2c00ddfa9757da94e 294 PANTHER PTHR30465 7 293 6.9E-111 T 13-09-2016 PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 PANTHER PTHR32303 37 229 2.9E-138 T 13-09-2016 PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 274 295 - T 13-09-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 Pfam PF01011 PQQ enzyme repeat 524 560 6.1E-10 T 13-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 SUPERFAMILY SSF50998 39 601 3.01E-146 T 13-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 Pfam PF13360 PQQ-like domain 82 331 5.5E-17 T 13-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 PANTHER PTHR32303 423 615 2.9E-138 T 13-09-2016 PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 PANTHER PTHR32303 254 384 2.9E-138 T 13-09-2016 PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 43 71 - T 13-09-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 SMART SM00564 519 550 6.7E-7 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 SMART SM00564 307 334 840.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 SMART SM00564 89 121 1.7E-6 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 SMART SM00564 190 227 230.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 SMART SM00564 139 170 3.1E-6 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 SMART SM00564 467 509 140.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 PANTHER PTHR32303:SF2 37 229 2.9E-138 T 13-09-2016 PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 PANTHER PTHR32303:SF2 423 615 2.9E-138 T 13-09-2016 PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 PANTHER PTHR32303:SF2 254 384 2.9E-138 T 13-09-2016 PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 Gene3D G3DSA:2.140.10.10 30 607 7.1E-144 T 13-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PMA3_RS15690 b2e9b995ec68af305a0558213ebcd447 615 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 26 578 1.1E-237 T 13-09-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 PMA3_RS26210 9b8d29dc6fd6fc8fdd3b5b755c92ce25 137 Pfam PF00072 Response regulator receiver domain 16 124 2.2E-10 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS26210 9b8d29dc6fd6fc8fdd3b5b755c92ce25 137 Gene3D G3DSA:3.40.50.2300 16 130 8.0E-17 T 13-09-2016 PMA3_RS26210 9b8d29dc6fd6fc8fdd3b5b755c92ce25 137 SMART SM00448 14 124 3.4E-4 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS26210 9b8d29dc6fd6fc8fdd3b5b755c92ce25 137 SUPERFAMILY SSF52172 16 130 6.4E-16 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS16710 4865e4b6b96e2f348741854bdde21b2c 322 Pfam PF04773 FecR protein 118 209 9.9E-19 T 13-09-2016 IPR006860 FecR protein PMA3_RS16710 4865e4b6b96e2f348741854bdde21b2c 322 PIRSF PIRSF018266 1 322 2.8E-80 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS16710 4865e4b6b96e2f348741854bdde21b2c 322 PANTHER PTHR30273:SF3 4 321 9.2E-65 T 13-09-2016 PMA3_RS16710 4865e4b6b96e2f348741854bdde21b2c 322 Pfam PF16220 Domain of unknown function (DUF4880) 11 51 2.1E-14 T 13-09-2016 IPR032623 FecR, N-terminal PMA3_RS16710 4865e4b6b96e2f348741854bdde21b2c 322 PANTHER PTHR30273 4 321 9.2E-65 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS08980 b759a94c5cc413eb318565ae440b87f4 447 Pfam PF00782 Dual specificity phosphatase, catalytic domain 325 434 1.9E-10 T 13-09-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 PMA3_RS08980 b759a94c5cc413eb318565ae440b87f4 447 SUPERFAMILY SSF52799 294 436 1.13E-21 T 13-09-2016 IPR029021 Protein-tyrosine phosphatase-like PMA3_RS08980 b759a94c5cc413eb318565ae440b87f4 447 PANTHER PTHR10159:SF370 271 436 1.1E-30 T 13-09-2016 PMA3_RS08980 b759a94c5cc413eb318565ae440b87f4 447 Gene3D G3DSA:3.90.190.10 288 437 3.5E-19 T 13-09-2016 IPR029021 Protein-tyrosine phosphatase-like PMA3_RS08980 b759a94c5cc413eb318565ae440b87f4 447 SMART SM00195 307 440 4.1E-6 T 13-09-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 PMA3_RS08980 b759a94c5cc413eb318565ae440b87f4 447 PANTHER PTHR10159 271 436 1.1E-30 T 13-09-2016 IPR024950 Dual specificity phosphatase PMA3_RS27550 43062d68ca05a0d2c179e09e198a23c6 932 Gene3D G3DSA:2.60.450.10 146 300 4.4E-19 T 13-09-2016 PMA3_RS27550 43062d68ca05a0d2c179e09e198a23c6 932 Pfam PF03968 OstA-like protein 157 287 1.0E-12 T 13-09-2016 IPR005653 Organic solvent tolerance-like, N-terminal PMA3_RS27550 43062d68ca05a0d2c179e09e198a23c6 932 Pfam PF04453 Organic solvent tolerance protein 400 838 1.6E-116 T 13-09-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 PMA3_RS27550 43062d68ca05a0d2c179e09e198a23c6 932 PANTHER PTHR30189 536 881 1.1E-95 T 13-09-2016 PMA3_RS27550 43062d68ca05a0d2c179e09e198a23c6 932 PANTHER PTHR30189 150 516 1.1E-95 T 13-09-2016 PMA3_RS27550 43062d68ca05a0d2c179e09e198a23c6 932 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 17 907 21.172 T 13-09-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 PMA3_RS30105 23f6cfb4e8d4a2d501e7a3e66f6ec9d3 367 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 359 2.1E-115 T 13-09-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PMA3_RS30105 23f6cfb4e8d4a2d501e7a3e66f6ec9d3 367 SUPERFAMILY SSF52540 1 342 1.31E-34 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30105 23f6cfb4e8d4a2d501e7a3e66f6ec9d3 367 PANTHER PTHR32182:SF0 1 361 2.2E-60 T 13-09-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PMA3_RS30105 23f6cfb4e8d4a2d501e7a3e66f6ec9d3 367 Gene3D G3DSA:3.40.50.300 232 341 9.5E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30105 23f6cfb4e8d4a2d501e7a3e66f6ec9d3 367 Gene3D G3DSA:3.40.50.300 1 162 9.5E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30105 23f6cfb4e8d4a2d501e7a3e66f6ec9d3 367 ProSitePatterns PS00618 RecF protein signature 2. 300 318 - T 13-09-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PMA3_RS30105 23f6cfb4e8d4a2d501e7a3e66f6ec9d3 367 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 13-09-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PMA3_RS30105 23f6cfb4e8d4a2d501e7a3e66f6ec9d3 367 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 367 94.618 T 13-09-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PMA3_RS30105 23f6cfb4e8d4a2d501e7a3e66f6ec9d3 367 PANTHER PTHR32182 1 361 2.2E-60 T 13-09-2016 PMA3_RS30105 23f6cfb4e8d4a2d501e7a3e66f6ec9d3 367 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 357 3.8E-34 T 13-09-2016 IPR003395 RecF/RecN/SMC, N-terminal PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 SMART SM00846 3 152 1.3E-74 T 13-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.1E-59 T 13-09-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 Gene3D G3DSA:3.40.50.720 2 160 4.0E-61 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 1.5E-50 T 13-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 PANTHER PTHR10836 1 330 2.2E-223 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 SUPERFAMILY SSF55347 152 314 8.33E-64 T 13-09-2016 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 6.6E-118 T 13-09-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 SUPERFAMILY SSF51735 1 179 2.55E-54 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 13-09-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 PANTHER PTHR10836:SF37 1 330 2.2E-223 T 13-09-2016 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.2E-28 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.2E-28 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.2E-28 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.2E-28 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.2E-28 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 Gene3D G3DSA:3.30.360.10 161 315 9.1E-68 T 13-09-2016 PMA3_RS09460 29214b99bb0fa2e75aefe494b4c5a9e5 334 PIRSF PIRSF000149 1 332 1.7E-120 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08810 329e7c504b22e445b6f551b6ccf9ce0c 304 SUPERFAMILY SSF53850 102 300 4.34E-35 T 13-09-2016 PMA3_RS08810 329e7c504b22e445b6f551b6ccf9ce0c 304 PANTHER PTHR30537 6 298 1.1E-76 T 13-09-2016 PMA3_RS08810 329e7c504b22e445b6f551b6ccf9ce0c 304 Pfam PF03466 LysR substrate binding domain 102 298 3.2E-33 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS08810 329e7c504b22e445b6f551b6ccf9ce0c 304 Gene3D G3DSA:3.40.190.10 184 264 2.7E-17 T 13-09-2016 PMA3_RS08810 329e7c504b22e445b6f551b6ccf9ce0c 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 8.1E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS08810 329e7c504b22e445b6f551b6ccf9ce0c 304 SUPERFAMILY SSF46785 12 120 9.58E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08810 329e7c504b22e445b6f551b6ccf9ce0c 304 Gene3D G3DSA:1.10.10.10 12 91 1.8E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08810 329e7c504b22e445b6f551b6ccf9ce0c 304 Gene3D G3DSA:3.40.190.10 102 183 5.5E-27 T 13-09-2016 PMA3_RS21780 09200d33b970c195e0d18115eb317e7d 309 PANTHER PTHR34069:SF2 1 306 1.8E-57 T 13-09-2016 PMA3_RS21780 09200d33b970c195e0d18115eb317e7d 309 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 185 8.8E-18 T 13-09-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PMA3_RS21780 09200d33b970c195e0d18115eb317e7d 309 SUPERFAMILY SSF53901 4 306 2.2E-37 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS21780 09200d33b970c195e0d18115eb317e7d 309 PANTHER PTHR34069 1 306 1.8E-57 T 13-09-2016 PMA3_RS21780 09200d33b970c195e0d18115eb317e7d 309 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 221 306 3.6E-21 T 13-09-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PMA3_RS21780 09200d33b970c195e0d18115eb317e7d 309 Gene3D G3DSA:3.40.47.10 2 161 5.1E-31 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS21780 09200d33b970c195e0d18115eb317e7d 309 Gene3D G3DSA:3.40.47.10 162 306 6.4E-35 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS02090 f1e468f33f69b62eca3e157a151776d7 644 PANTHER PTHR32089 287 644 1.0E-76 T 13-09-2016 PMA3_RS02090 f1e468f33f69b62eca3e157a151776d7 644 PANTHER PTHR32089 138 233 1.0E-76 T 13-09-2016 PMA3_RS02090 f1e468f33f69b62eca3e157a151776d7 644 SMART SM00304 313 367 1.0E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS02090 f1e468f33f69b62eca3e157a151776d7 644 SMART SM00283 382 643 2.6E-43 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS02090 f1e468f33f69b62eca3e157a151776d7 644 Gene3D G3DSA:1.10.287.950 397 613 1.6E-42 T 13-09-2016 PMA3_RS02090 f1e468f33f69b62eca3e157a151776d7 644 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 642 4.1E-40 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS02090 f1e468f33f69b62eca3e157a151776d7 644 Pfam PF00672 HAMP domain 296 363 2.1E-13 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS02090 f1e468f33f69b62eca3e157a151776d7 644 SUPERFAMILY SSF58104 335 643 6.28E-59 T 13-09-2016 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 Gene3D G3DSA:1.10.340.30 23 122 3.5E-34 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 PIRSF PIRSF001435 1 212 8.1E-53 T 13-09-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.047 T 13-09-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.0E-10 T 13-09-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 PANTHER PTHR10359 1 212 3.4E-90 T 13-09-2016 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.1E-84 T 13-09-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.0E-17 T 13-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 Gene3D G3DSA:1.10.1670.10 123 208 2.4E-35 T 13-09-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 13-09-2016 IPR004035 Endonuclease III, iron-sulphur binding site PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 PANTHER PTHR10359:SF18 1 212 3.4E-90 T 13-09-2016 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 SMART SM00478 38 185 3.5E-55 T 13-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 SUPERFAMILY SSF48150 3 208 3.77E-72 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS23730 9054eb7a15fbc2f93c694f763b712bd4 212 SMART SM00525 186 206 9.6E-5 T 13-09-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 PMA3_RS16725 c57288822df3e6e158ff49777be07143 89 PANTHER PTHR30537 1 83 5.5E-19 T 13-09-2016 PMA3_RS16725 c57288822df3e6e158ff49777be07143 89 Gene3D G3DSA:3.40.190.10 2 43 1.5E-7 T 13-09-2016 PMA3_RS16725 c57288822df3e6e158ff49777be07143 89 SUPERFAMILY SSF53850 2 79 8.69E-12 T 13-09-2016 PMA3_RS16725 c57288822df3e6e158ff49777be07143 89 Pfam PF03466 LysR substrate binding domain 2 76 2.0E-11 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS16725 c57288822df3e6e158ff49777be07143 89 PANTHER PTHR30537:SF5 1 83 5.5E-19 T 13-09-2016 PMA3_RS08060 68de731894fad725898740ab4cfde6b9 272 PANTHER PTHR21089 1 271 3.6E-145 T 13-09-2016 PMA3_RS08060 68de731894fad725898740ab4cfde6b9 272 Gene3D G3DSA:3.40.192.10 25 110 1.3E-27 T 13-09-2016 PMA3_RS08060 68de731894fad725898740ab4cfde6b9 272 PANTHER PTHR21089:SF9 1 271 3.6E-145 T 13-09-2016 PMA3_RS08060 68de731894fad725898740ab4cfde6b9 272 Gene3D G3DSA:3.40.50.720 111 268 3.0E-41 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08060 68de731894fad725898740ab4cfde6b9 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 93 4.0E-16 T 13-09-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS08060 68de731894fad725898740ab4cfde6b9 272 SUPERFAMILY SSF51735 106 267 2.76E-32 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08060 68de731894fad725898740ab4cfde6b9 272 SUPERFAMILY SSF53223 9 105 3.11E-26 T 13-09-2016 PMA3_RS03975 175f0a0bd90927df68af2c98f42338cf 246 Pfam PF00691 OmpA family 125 220 1.2E-20 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS03975 175f0a0bd90927df68af2c98f42338cf 246 SUPERFAMILY SSF103088 113 226 9.94E-36 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS03975 175f0a0bd90927df68af2c98f42338cf 246 Pfam PF13488 Glycine zipper 53 95 1.2E-8 T 13-09-2016 PMA3_RS03975 175f0a0bd90927df68af2c98f42338cf 246 Gene3D G3DSA:3.30.1330.60 104 226 1.8E-38 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS03975 175f0a0bd90927df68af2c98f42338cf 246 PANTHER PTHR30128 46 229 9.6E-52 T 13-09-2016 PMA3_RS03975 175f0a0bd90927df68af2c98f42338cf 246 PRINTS PR01021 OMPA domain signature 156 171 4.2E-13 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS03975 175f0a0bd90927df68af2c98f42338cf 246 PRINTS PR01021 OMPA domain signature 171 187 4.2E-13 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS03975 175f0a0bd90927df68af2c98f42338cf 246 PRINTS PR01021 OMPA domain signature 126 148 4.2E-13 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 82 206 9.0E-19 T 13-09-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 Pfam PF08279 HTH domain 3 54 1.4E-9 T 13-09-2016 IPR013196 Helix-turn-helix, type 11 PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 Gene3D G3DSA:3.30.930.10 74 265 9.0E-63 T 13-09-2016 PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 Gene3D G3DSA:1.10.10.10 1 58 3.9E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 PANTHER PTHR12835 1 315 7.7E-74 T 13-09-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 Pfam PF02237 Biotin protein ligase C terminal domain 270 314 2.7E-4 T 13-09-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 78 313 2.5E-60 T 13-09-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 Gene3D G3DSA:2.30.30.100 268 317 1.4E-16 T 13-09-2016 PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 SUPERFAMILY SSF50037 268 314 3.57E-8 T 13-09-2016 IPR008988 Transcriptional repressor, C-terminal PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 SUPERFAMILY SSF46785 3 55 2.18E-8 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 1 314 32.676 T 13-09-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 PMA3_RS27365 c1f26f35f17beebf3ac766f7339378cb 319 SUPERFAMILY SSF55681 71 265 9.23E-60 T 13-09-2016 PMA3_RS02060 e65e829ef29679a7b2b8ecb93c34b06f 88 Gene3D G3DSA:2.30.30.100 1 74 6.8E-35 T 13-09-2016 PMA3_RS02060 e65e829ef29679a7b2b8ecb93c34b06f 88 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 64 26.672 T 13-09-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PMA3_RS02060 e65e829ef29679a7b2b8ecb93c34b06f 88 PANTHER PTHR34772:SF1 1 82 2.3E-39 T 13-09-2016 PMA3_RS02060 e65e829ef29679a7b2b8ecb93c34b06f 88 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 64 1.6E-29 T 13-09-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PMA3_RS02060 e65e829ef29679a7b2b8ecb93c34b06f 88 PANTHER PTHR34772 1 82 2.3E-39 T 13-09-2016 PMA3_RS02060 e65e829ef29679a7b2b8ecb93c34b06f 88 SUPERFAMILY SSF50182 7 69 1.56E-23 T 13-09-2016 IPR010920 LSM domain PMA3_RS13650 2cbf6429d81f8437c9e635182c275c31 466 SMART SM00345 14 73 4.5E-6 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS13650 2cbf6429d81f8437c9e635182c275c31 466 PANTHER PTHR11751:SF386 92 461 3.4E-29 T 13-09-2016 PMA3_RS13650 2cbf6429d81f8437c9e635182c275c31 466 Gene3D G3DSA:3.40.640.10 139 350 2.2E-29 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS13650 2cbf6429d81f8437c9e635182c275c31 466 Gene3D G3DSA:3.90.1150.10 351 458 4.7E-11 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS13650 2cbf6429d81f8437c9e635182c275c31 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 7.8E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS13650 2cbf6429d81f8437c9e635182c275c31 466 Pfam PF00155 Aminotransferase class I and II 142 440 9.9E-15 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS13650 2cbf6429d81f8437c9e635182c275c31 466 SUPERFAMILY SSF53383 96 461 6.36E-57 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS13650 2cbf6429d81f8437c9e635182c275c31 466 PANTHER PTHR11751 92 461 3.4E-29 T 13-09-2016 PMA3_RS13650 2cbf6429d81f8437c9e635182c275c31 466 Gene3D G3DSA:1.10.10.10 10 72 1.8E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13650 2cbf6429d81f8437c9e635182c275c31 466 SUPERFAMILY SSF46785 10 77 1.19E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 SUPERFAMILY SSF49265 333 497 1.17E-17 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 Gene3D G3DSA:2.60.40.10 7 68 1.4E-7 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 SMART SM00060 421 497 4.9E-6 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 SMART SM00060 331 404 0.054 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 SMART SM00060 242 318 9.4E-4 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 SMART SM00060 65 139 4.4E-8 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 SMART SM00060 152 226 1.1E-10 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 PANTHER PTHR10489 1 496 5.4E-26 T 13-09-2016 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 SUPERFAMILY SSF49265 151 325 4.15E-22 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 SUPERFAMILY SSF49265 20 150 3.88E-17 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 Pfam PF00041 Fibronectin type III domain 154 226 1.0E-8 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 Pfam PF00041 Fibronectin type III domain 423 495 2.0E-5 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 Pfam PF00041 Fibronectin type III domain 67 140 4.3E-7 T 13-09-2016 IPR003961 Fibronectin type III GO:0005515 PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 Gene3D G3DSA:2.60.40.10 245 324 1.3E-7 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 Gene3D G3DSA:2.60.40.10 149 235 2.8E-13 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 Gene3D G3DSA:2.60.40.10 332 413 1.3E-7 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 Gene3D G3DSA:2.60.40.10 420 498 1.9E-14 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS15815 8571b1303cc53cba70820aef59b64a48 508 Gene3D G3DSA:2.60.40.10 69 142 3.9E-11 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS21195 b963a34b7ab8631bde9c01e132cac96a 286 PANTHER PTHR13903:SF4 4 286 7.2E-85 T 13-09-2016 PMA3_RS21195 b963a34b7ab8631bde9c01e132cac96a 286 Pfam PF05726 Pirin C-terminal cupin domain 175 271 5.2E-19 T 13-09-2016 IPR008778 Pirin, C-terminal domain PMA3_RS21195 b963a34b7ab8631bde9c01e132cac96a 286 SUPERFAMILY SSF51182 6 283 6.43E-69 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS21195 b963a34b7ab8631bde9c01e132cac96a 286 PIRSF PIRSF006232 1 282 1.0E-73 T 13-09-2016 IPR012093 Pirin PMA3_RS21195 b963a34b7ab8631bde9c01e132cac96a 286 Pfam PF02678 Pirin 25 122 7.3E-30 T 13-09-2016 IPR003829 Pirin, N-terminal domain PMA3_RS21195 b963a34b7ab8631bde9c01e132cac96a 286 Gene3D G3DSA:2.60.120.10 9 246 2.9E-58 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS21195 b963a34b7ab8631bde9c01e132cac96a 286 PANTHER PTHR13903 4 286 7.2E-85 T 13-09-2016 IPR012093 Pirin PMA3_RS02015 bdaebdb6b7011c2e16fae1a009abd821 343 Gene3D G3DSA:3.40.50.300 117 277 4.0E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02015 bdaebdb6b7011c2e16fae1a009abd821 343 PANTHER PTHR32120 3 338 2.0E-139 T 13-09-2016 PMA3_RS02015 bdaebdb6b7011c2e16fae1a009abd821 343 PANTHER PTHR32120:SF2 3 338 2.0E-139 T 13-09-2016 PMA3_RS02015 bdaebdb6b7011c2e16fae1a009abd821 343 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 45 342 35.915 T 13-09-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PMA3_RS02015 bdaebdb6b7011c2e16fae1a009abd821 343 SUPERFAMILY SSF52540 117 335 3.57E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02015 bdaebdb6b7011c2e16fae1a009abd821 343 Gene3D G3DSA:1.10.40.50 279 340 6.3E-21 T 13-09-2016 PMA3_RS02015 bdaebdb6b7011c2e16fae1a009abd821 343 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 82 335 1.2E-76 T 13-09-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PMA3_RS02015 bdaebdb6b7011c2e16fae1a009abd821 343 Pfam PF03193 Protein of unknown function, DUF258 104 277 6.7E-55 T 13-09-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 PMA3_RS17180 31771761d5a4deede99f3bd7e551a06b 398 Pfam PF02417 Chromate transporter 13 178 3.7E-33 T 13-09-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 PMA3_RS17180 31771761d5a4deede99f3bd7e551a06b 398 Pfam PF02417 Chromate transporter 230 396 6.2E-38 T 13-09-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 PMA3_RS17180 31771761d5a4deede99f3bd7e551a06b 398 PANTHER PTHR33567 10 395 1.9E-134 T 13-09-2016 PMA3_RS17180 31771761d5a4deede99f3bd7e551a06b 398 PANTHER PTHR33567:SF3 10 395 1.9E-134 T 13-09-2016 PMA3_RS17180 31771761d5a4deede99f3bd7e551a06b 398 PIRSF PIRSF004810 1 398 2.3E-131 T 13-09-2016 IPR014047 Chromate transporter, long chain PMA3_RS17180 31771761d5a4deede99f3bd7e551a06b 398 TIGRFAM TIGR00937 2A51: chromate efflux transporter 19 395 6.3E-103 T 13-09-2016 IPR014047 Chromate transporter, long chain PMA3_RS20960 79e99131d7ce84ece4e38be4a431af8e 370 Gene3D G3DSA:3.90.1150.10 261 366 5.9E-30 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS20960 79e99131d7ce84ece4e38be4a431af8e 370 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 227 236 - T 13-09-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PMA3_RS20960 79e99131d7ce84ece4e38be4a431af8e 370 SUPERFAMILY SSF53383 12 363 9.46E-79 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS20960 79e99131d7ce84ece4e38be4a431af8e 370 PANTHER PTHR11751 24 369 5.1E-108 T 13-09-2016 PMA3_RS20960 79e99131d7ce84ece4e38be4a431af8e 370 Pfam PF00155 Aminotransferase class I and II 39 362 1.1E-51 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS20960 79e99131d7ce84ece4e38be4a431af8e 370 PANTHER PTHR11751:SF347 24 369 5.1E-108 T 13-09-2016 PMA3_RS20960 79e99131d7ce84ece4e38be4a431af8e 370 Gene3D G3DSA:3.40.640.10 52 260 6.4E-65 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS20960 79e99131d7ce84ece4e38be4a431af8e 370 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 365 2.4E-112 T 13-09-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PMA3_RS20960 79e99131d7ce84ece4e38be4a431af8e 370 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 367 62.669 T 13-09-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 797 941 7.6E-55 T 13-09-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 3.9E-17 T 13-09-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 PANTHER PTHR23152:SF4 1 943 0.0 T 13-09-2016 PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 PANTHER PTHR23152 1 943 0.0 T 13-09-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 SUPERFAMILY SSF52518 582 799 1.35E-50 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 Pfam PF00676 Dehydrogenase E1 component 223 526 7.7E-52 T 13-09-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 PIRSF PIRSF000157 1 943 0.0 T 13-09-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 941 0.0 T 13-09-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 Pfam PF02779 Transketolase, pyrimidine binding domain 599 793 9.8E-65 T 13-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 SMART SM00861 599 792 5.1E-56 T 13-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 Gene3D G3DSA:3.40.50.970 599 800 5.0E-21 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 SUPERFAMILY SSF52518 126 550 2.65E-87 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS21260 13c714beed349a9fd3f81cbfe8cac201 943 Gene3D G3DSA:3.40.50.970 166 541 1.7E-77 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS23035 1f4f620e53b3fa8cd5c59bac932ac225 78 PANTHER PTHR40613 1 71 1.3E-21 T 13-09-2016 PMA3_RS23035 1f4f620e53b3fa8cd5c59bac932ac225 78 PANTHER PTHR40613:SF1 1 71 1.3E-21 T 13-09-2016 PMA3_RS23035 1f4f620e53b3fa8cd5c59bac932ac225 78 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 70 5.0E-25 T 13-09-2016 IPR024530 Putative quorum-sensing-regulated virulence factor PMA3_RS23035 1f4f620e53b3fa8cd5c59bac932ac225 78 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 1.5E-30 T 13-09-2016 IPR024530 Putative quorum-sensing-regulated virulence factor PMA3_RS00390 a5709e7a67fb2d15ad46c5e2190cca3c 341 PANTHER PTHR30024:SF2 1 334 3.5E-163 T 13-09-2016 PMA3_RS00390 a5709e7a67fb2d15ad46c5e2190cca3c 341 Gene3D G3DSA:3.40.190.10 59 152 7.3E-5 T 13-09-2016 PMA3_RS00390 a5709e7a67fb2d15ad46c5e2190cca3c 341 SUPERFAMILY SSF53850 44 291 9.15E-35 T 13-09-2016 PMA3_RS00390 a5709e7a67fb2d15ad46c5e2190cca3c 341 PANTHER PTHR30024 1 334 3.5E-163 T 13-09-2016 PMA3_RS00390 a5709e7a67fb2d15ad46c5e2190cca3c 341 Pfam PF13379 NMT1-like family 36 274 2.0E-27 T 13-09-2016 PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 Gene3D G3DSA:3.40.50.20 3 130 9.7E-54 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 Gene3D G3DSA:3.30.1490.20 138 192 4.8E-26 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 Gene3D G3DSA:3.30.470.20 193 301 4.4E-48 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 170.539 T 13-09-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 SUPERFAMILY SSF56059 124 313 2.7E-57 T 13-09-2016 PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 121 7.8E-45 T 13-09-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 313 1.2E-133 T 13-09-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 SUPERFAMILY SSF52440 3 123 6.91E-45 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 PANTHER PTHR21621 1 315 1.7E-153 T 13-09-2016 PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 PANTHER PTHR21621:SF4 1 315 1.7E-153 T 13-09-2016 PMA3_RS28425 45fb0c2cf6efa1e6fb184594f6c0fd8c 323 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 3.2E-76 T 13-09-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PMA3_RS06015 98b0e58d8d8e1c74008fc01a0ac239ff 147 Gene3D G3DSA:3.10.129.10 2 139 1.6E-45 T 13-09-2016 IPR029069 HotDog domain PMA3_RS06015 98b0e58d8d8e1c74008fc01a0ac239ff 147 PANTHER PTHR12418:SF33 1 138 4.7E-47 T 13-09-2016 PMA3_RS06015 98b0e58d8d8e1c74008fc01a0ac239ff 147 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 136 1.9E-34 T 13-09-2016 IPR003736 Phenylacetic acid degradation-related domain PMA3_RS06015 98b0e58d8d8e1c74008fc01a0ac239ff 147 SUPERFAMILY SSF54637 16 143 5.93E-29 T 13-09-2016 IPR029069 HotDog domain PMA3_RS06015 98b0e58d8d8e1c74008fc01a0ac239ff 147 Pfam PF03061 Thioesterase superfamily 51 126 6.0E-15 T 13-09-2016 IPR006683 Thioesterase domain PMA3_RS06015 98b0e58d8d8e1c74008fc01a0ac239ff 147 PANTHER PTHR12418 1 138 4.7E-47 T 13-09-2016 PMA3_RS19450 5760208f9572d2553ddf68b331865b2b 246 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 28 246 1.7E-29 T 13-09-2016 IPR010239 Conserved hypothetical protein CHP02001 PMA3_RS19450 5760208f9572d2553ddf68b331865b2b 246 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 246 5.7E-43 T 13-09-2016 IPR010239 Conserved hypothetical protein CHP02001 PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 Pfam PF02347 Glycine cleavage system P-protein 475 729 2.8E-7 T 13-09-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 Pfam PF02347 Glycine cleavage system P-protein 18 441 2.1E-175 T 13-09-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 SUPERFAMILY SSF53383 19 439 1.68E-99 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 Gene3D G3DSA:3.40.640.10 503 741 2.1E-43 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 Gene3D G3DSA:3.40.640.10 91 305 3.1E-10 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 PANTHER PTHR11773 6 957 0.0 T 13-09-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 19 950 0.0 T 13-09-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 10 956 25.49 T 13-09-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 PANTHER PTHR11773:SF1 6 957 0.0 T 13-09-2016 PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 SUPERFAMILY SSF53383 929 951 1.69E-97 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS29000 405bcb798310128d6bb075aaaae502b8 957 SUPERFAMILY SSF53383 476 887 1.69E-97 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS02955 9a2c23b48fa863e59aae32d62f90752b 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 3.1E-5 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS02955 9a2c23b48fa863e59aae32d62f90752b 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 3.1E-5 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS02955 9a2c23b48fa863e59aae32d62f90752b 225 Gene3D G3DSA:1.10.10.60 63 84 2.5E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02955 9a2c23b48fa863e59aae32d62f90752b 225 SUPERFAMILY SSF48498 99 224 7.56E-37 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS02955 9a2c23b48fa863e59aae32d62f90752b 225 PANTHER PTHR30328:SF16 5 224 1.7E-106 T 13-09-2016 PMA3_RS02955 9a2c23b48fa863e59aae32d62f90752b 225 PANTHER PTHR30328 5 224 1.7E-106 T 13-09-2016 PMA3_RS02955 9a2c23b48fa863e59aae32d62f90752b 225 SUPERFAMILY SSF46689 20 96 1.59E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02955 9a2c23b48fa863e59aae32d62f90752b 225 Gene3D G3DSA:1.10.357.10 85 221 1.2E-29 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS02955 9a2c23b48fa863e59aae32d62f90752b 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 79 5.9E-13 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS02955 9a2c23b48fa863e59aae32d62f90752b 225 Gene3D G3DSA:1.10.10.60 18 62 7.7E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 Gene3D G3DSA:3.30.360.10 205 503 1.1E-111 T 13-09-2016 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 21 205 1.1E-54 T 13-09-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 17 504 3.4E-167 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 SUPERFAMILY SSF55347 195 504 5.56E-107 T 13-09-2016 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 195 201 - T 13-09-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 PANTHER PTHR23429 15 505 8.0E-202 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 208 504 2.7E-106 T 13-09-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 PIRSF PIRSF000110 4 506 2.1E-157 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 Gene3D G3DSA:3.40.50.720 15 204 9.3E-58 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 161 174 2.9E-44 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 346 372 2.9E-44 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 237 254 2.9E-44 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 255 271 2.9E-44 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 185 213 2.9E-44 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 PANTHER PTHR23429:SF0 15 505 8.0E-202 T 13-09-2016 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 16 505 74.407 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS13200 62cedd53129fbe4d1afede8bc40b7dc2 507 SUPERFAMILY SSF51735 8 208 1.26E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 Gene3D G3DSA:3.90.45.10 5 166 8.0E-67 T 13-09-2016 IPR023635 Peptide deformylase PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 PANTHER PTHR10458:SF10 1 168 2.5E-105 T 13-09-2016 PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 Hamap MF_00163 Peptide deformylase [def]. 2 163 32.376 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 PIRSF PIRSF004749 1 168 1.0E-58 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 PRINTS PR01576 Peptide deformylase signature 102 120 4.3E-40 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 PRINTS PR01576 Peptide deformylase signature 90 101 4.3E-40 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 PRINTS PR01576 Peptide deformylase signature 121 150 4.3E-40 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 PRINTS PR01576 Peptide deformylase signature 33 62 4.3E-40 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 Pfam PF01327 Polypeptide deformylase 4 153 4.4E-52 T 13-09-2016 IPR023635 Peptide deformylase PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 1.2E-56 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 PANTHER PTHR10458 1 168 2.5E-105 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS30175 3a697347db40f1faf9b9178feedffff3 168 SUPERFAMILY SSF56420 2 165 1.31E-64 T 13-09-2016 IPR023635 Peptide deformylase PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 SUPERFAMILY SSF47203 230 385 1.11E-43 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 Gene3D G3DSA:1.10.540.10 1 117 3.7E-30 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 Gene3D G3DSA:2.40.110.10 121 221 6.4E-31 T 13-09-2016 PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 365 9.8E-35 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 PANTHER PTHR10909 7 387 3.4E-273 T 13-09-2016 PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 116 5.9E-24 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 219 1.2E-21 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 PANTHER PTHR10909:SF285 7 387 3.4E-273 T 13-09-2016 PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 Gene3D G3DSA:1.20.140.10 222 386 3.0E-53 T 13-09-2016 PMA3_RS18310 00d5094de74705361ff4abaa0342f589 387 SUPERFAMILY SSF56645 1 231 1.83E-60 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS27500 f5b9fb643750f6d1278b22b99d054f1c 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 258 1.4E-18 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS27500 f5b9fb643750f6d1278b22b99d054f1c 274 PANTHER PTHR30193 10 274 1.1E-97 T 13-09-2016 PMA3_RS27500 f5b9fb643750f6d1278b22b99d054f1c 274 Gene3D G3DSA:1.10.3720.10 17 268 8.4E-60 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS27500 f5b9fb643750f6d1278b22b99d054f1c 274 SUPERFAMILY SSF161098 12 267 1.4E-61 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS27500 f5b9fb643750f6d1278b22b99d054f1c 274 PANTHER PTHR30193:SF20 10 274 1.1E-97 T 13-09-2016 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 490 9.4E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 9.4E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 509 9.4E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 465 9.4E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SUPERFAMILY SSF158472 192 241 2.48E-7 T 13-09-2016 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Pfam PF00672 HAMP domain 173 240 2.8E-13 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SMART SM00388 284 349 1.8E-26 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Pfam PF00072 Response regulator receiver domain 669 783 4.3E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Gene3D G3DSA:3.40.50.2300 528 656 4.1E-4 T 13-09-2016 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Pfam PF01627 Hpt domain 830 911 1.0E-10 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 36 168 2.3E-20 T 13-09-2016 IPR019247 Histidine kinase BarA, N-terminal PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SMART SM00073 821 917 2.1E-11 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SUPERFAMILY SSF47226 766 779 3.66E-21 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SUPERFAMILY SSF47226 810 909 3.66E-21 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SUPERFAMILY SSF55874 338 510 3.41E-44 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Gene3D G3DSA:3.30.565.10 351 515 6.0E-45 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Gene3D G3DSA:3.40.50.2300 664 788 1.2E-39 T 13-09-2016 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SUPERFAMILY SSF52172 667 787 1.22E-36 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SMART SM00448 667 783 2.0E-38 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SMART SM00387 396 512 3.2E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Gene3D G3DSA:1.20.120.160 822 910 3.2E-16 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 349 4.2E-22 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SMART SM00304 192 244 3.5E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Gene3D G3DSA:1.10.287.130 276 345 4.6E-19 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 PANTHER PTHR24423 186 240 1.6E-150 T 13-09-2016 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 PANTHER PTHR24423 280 515 1.6E-150 T 13-09-2016 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 PANTHER PTHR24423 547 824 1.6E-150 T 13-09-2016 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 PANTHER PTHR24423 21 32 1.6E-150 T 13-09-2016 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SUPERFAMILY SSF47384 270 350 1.16E-22 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 511 3.9E-26 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05925 c077ba992d7d1e995c47342fd70804ae 917 SUPERFAMILY SSF52172 527 650 2.99E-7 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS27120 cc84b19f9ba1d3ef963e23efc4725610 465 Gene3D G3DSA:1.20.1250.20 213 397 7.3E-23 T 13-09-2016 PMA3_RS27120 cc84b19f9ba1d3ef963e23efc4725610 465 Gene3D G3DSA:1.20.1250.20 20 194 1.9E-35 T 13-09-2016 PMA3_RS27120 cc84b19f9ba1d3ef963e23efc4725610 465 SUPERFAMILY SSF103473 14 396 3.14E-66 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS27120 cc84b19f9ba1d3ef963e23efc4725610 465 Pfam PF07690 Major Facilitator Superfamily 20 269 5.3E-32 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS27120 cc84b19f9ba1d3ef963e23efc4725610 465 PANTHER PTHR23510 13 404 2.5E-216 T 13-09-2016 PMA3_RS27120 cc84b19f9ba1d3ef963e23efc4725610 465 PANTHER PTHR23510:SF6 13 404 2.5E-216 T 13-09-2016 PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 SUPERFAMILY SSF51206 13 140 1.19E-32 T 13-09-2016 IPR018490 Cyclic nucleotide-binding-like PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 SMART SM00419 164 212 1.1E-12 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 72 93 - T 13-09-2016 IPR018488 Cyclic nucleotide-binding, conserved site PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 Gene3D G3DSA:2.60.120.10 11 141 4.7E-37 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 PANTHER PTHR24567 1 211 1.8E-119 T 13-09-2016 PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 Pfam PF00027 Cyclic nucleotide-binding domain 23 113 1.3E-19 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 Gene3D G3DSA:1.10.10.10 143 211 5.7E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 201 5.9E-8 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 170 186 5.9E-8 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 PANTHER PTHR24567:SF27 1 211 1.8E-119 T 13-09-2016 PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 SMART SM00100 1 126 2.6E-20 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 ProSitePatterns PS00042 Crp-type HTH domain signature. 172 195 - T 13-09-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 Pfam PF00325 Bacterial regulatory proteins, crp family 170 200 3.0E-14 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS27455 763b9d556f2c0ad25bfd9180c51b982d 214 SUPERFAMILY SSF46785 143 211 6.12E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28410 f07dbdf5b0c317947f3121427e950a2b 177 PANTHER PTHR22617 29 136 1.7E-27 T 13-09-2016 PMA3_RS28410 f07dbdf5b0c317947f3121427e950a2b 177 SUPERFAMILY SSF50341 29 170 2.88E-32 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS28410 f07dbdf5b0c317947f3121427e950a2b 177 Gene3D G3DSA:2.30.30.40 112 144 4.8E-4 T 13-09-2016 PMA3_RS28410 f07dbdf5b0c317947f3121427e950a2b 177 SMART SM00260 32 167 5.6E-23 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS28410 f07dbdf5b0c317947f3121427e950a2b 177 Gene3D G3DSA:2.40.50.180 74 111 9.4E-9 T 13-09-2016 PMA3_RS28410 f07dbdf5b0c317947f3121427e950a2b 177 Pfam PF01584 CheW-like domain 38 169 7.9E-31 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS19235 d8e4069752523fbd218ac4a8d3a53bdd 307 Gene3D G3DSA:1.10.10.10 6 86 1.2E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19235 d8e4069752523fbd218ac4a8d3a53bdd 307 PANTHER PTHR30537:SF5 1 293 9.6E-111 T 13-09-2016 PMA3_RS19235 d8e4069752523fbd218ac4a8d3a53bdd 307 PANTHER PTHR30537 1 293 9.6E-111 T 13-09-2016 PMA3_RS19235 d8e4069752523fbd218ac4a8d3a53bdd 307 SUPERFAMILY SSF53850 90 295 7.96E-47 T 13-09-2016 PMA3_RS19235 d8e4069752523fbd218ac4a8d3a53bdd 307 Gene3D G3DSA:3.40.190.10 93 176 7.1E-24 T 13-09-2016 PMA3_RS19235 d8e4069752523fbd218ac4a8d3a53bdd 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.8E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19235 d8e4069752523fbd218ac4a8d3a53bdd 307 SUPERFAMILY SSF46785 7 111 2.63E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19235 d8e4069752523fbd218ac4a8d3a53bdd 307 Pfam PF03466 LysR substrate binding domain 88 293 8.0E-46 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS19235 d8e4069752523fbd218ac4a8d3a53bdd 307 Gene3D G3DSA:3.40.190.10 177 260 1.1E-18 T 13-09-2016 PMA3_RS10825 3d40d0d3bf7d686d936affbeae9a853f 134 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 92 126 1.1E-10 T 13-09-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PMA3_RS10825 3d40d0d3bf7d686d936affbeae9a853f 134 PANTHER PTHR33823 9 133 3.0E-23 T 13-09-2016 PMA3_RS10825 3d40d0d3bf7d686d936affbeae9a853f 134 PANTHER PTHR33823:SF2 9 133 3.0E-23 T 13-09-2016 PMA3_RS10825 3d40d0d3bf7d686d936affbeae9a853f 134 SUPERFAMILY SSF57716 93 131 3.99E-8 T 13-09-2016 PMA3_RS10825 3d40d0d3bf7d686d936affbeae9a853f 134 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 96 120 - T 13-09-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PMA3_RS10825 3d40d0d3bf7d686d936affbeae9a853f 134 SUPERFAMILY SSF109635 2 91 2.35E-21 T 13-09-2016 PMA3_RS09545 bad921e87ad5e8e75f78fb74dc0329c5 61 Pfam PF01402 Ribbon-helix-helix protein, copG family 7 44 1.6E-4 T 13-09-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PMA3_RS09545 bad921e87ad5e8e75f78fb74dc0329c5 61 Gene3D G3DSA:1.10.1220.10 2 46 1.3E-9 T 13-09-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PMA3_RS09545 bad921e87ad5e8e75f78fb74dc0329c5 61 SUPERFAMILY SSF47598 2 46 1.91E-9 T 13-09-2016 IPR010985 Ribbon-helix-helix GO:0006355 PMA3_RS19970 33a97682c44d2bc0cfa1294fa3fcaa6f 118 Gene3D G3DSA:3.30.479.10 1 117 2.3E-39 T 13-09-2016 PMA3_RS19970 33a97682c44d2bc0cfa1294fa3fcaa6f 118 PIRSF PIRSF006113 1 118 5.2E-48 T 13-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PMA3_RS19970 33a97682c44d2bc0cfa1294fa3fcaa6f 118 PANTHER PTHR12589 1 118 6.8E-48 T 13-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PMA3_RS19970 33a97682c44d2bc0cfa1294fa3fcaa6f 118 SUPERFAMILY SSF55620 2 118 1.28E-40 T 13-09-2016 PMA3_RS19970 33a97682c44d2bc0cfa1294fa3fcaa6f 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 2 94 6.4E-33 T 13-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PMA3_RS19970 33a97682c44d2bc0cfa1294fa3fcaa6f 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 2 117 2.8E-35 T 13-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PMA3_RS26555 4af2f2cd61abf99edc899b70bf068578 340 PIRSF PIRSF005963 5 339 1.8E-130 T 13-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PMA3_RS26555 4af2f2cd61abf99edc899b70bf068578 340 Gene3D G3DSA:3.20.20.70 67 335 1.4E-72 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS26555 4af2f2cd61abf99edc899b70bf068578 340 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 330 1.5E-130 T 13-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PMA3_RS26555 4af2f2cd61abf99edc899b70bf068578 340 SUPERFAMILY SSF102114 65 331 1.14E-68 T 13-09-2016 PMA3_RS26555 4af2f2cd61abf99edc899b70bf068578 340 PANTHER PTHR10949 26 329 1.1E-169 T 13-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PMA3_RS26555 4af2f2cd61abf99edc899b70bf068578 340 SMART SM00729 99 305 2.4E-15 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS26555 4af2f2cd61abf99edc899b70bf068578 340 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 52 88 2.8E-7 T 13-09-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PMA3_RS26555 4af2f2cd61abf99edc899b70bf068578 340 Hamap MF_00206 Lipoyl synthase [lipA]. 51 338 153.49 T 13-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PMA3_RS26555 4af2f2cd61abf99edc899b70bf068578 340 Pfam PF04055 Radical SAM superfamily 106 265 4.8E-13 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS28040 b8809641861faa99bd6cd57d9ac4abe2 323 PANTHER PTHR11474 6 313 1.7E-52 T 13-09-2016 PMA3_RS28040 b8809641861faa99bd6cd57d9ac4abe2 323 Gene3D G3DSA:1.10.1280.10 1 305 6.4E-60 T 13-09-2016 IPR008922 Uncharacterised domain, di-copper centre PMA3_RS28040 b8809641861faa99bd6cd57d9ac4abe2 323 SUPERFAMILY SSF48056 2 304 1.18E-59 T 13-09-2016 IPR008922 Uncharacterised domain, di-copper centre PMA3_RS28040 b8809641861faa99bd6cd57d9ac4abe2 323 PRINTS PR00092 Tyrosinase copper-binding domain signature 61 78 4.2E-19 T 13-09-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 PMA3_RS28040 b8809641861faa99bd6cd57d9ac4abe2 323 PRINTS PR00092 Tyrosinase copper-binding domain signature 234 252 4.2E-19 T 13-09-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 PMA3_RS28040 b8809641861faa99bd6cd57d9ac4abe2 323 PRINTS PR00092 Tyrosinase copper-binding domain signature 215 226 4.2E-19 T 13-09-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 PMA3_RS28040 b8809641861faa99bd6cd57d9ac4abe2 323 PRINTS PR00092 Tyrosinase copper-binding domain signature 90 95 4.2E-19 T 13-09-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 PMA3_RS28040 b8809641861faa99bd6cd57d9ac4abe2 323 ProSitePatterns PS00497 Tyrosinase CuA-binding region signature. 61 78 - T 13-09-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 PMA3_RS28040 b8809641861faa99bd6cd57d9ac4abe2 323 ProSitePatterns PS00498 Tyrosinase and hemocyanins CuB-binding region signature. 235 246 - T 13-09-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 PMA3_RS28040 b8809641861faa99bd6cd57d9ac4abe2 323 Pfam PF00264 Common central domain of tyrosinase 30 254 1.3E-39 T 13-09-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 PMA3_RS10900 8847a067be702fcae9e13a0775525c81 187 SUPERFAMILY SSF51182 58 182 5.67E-21 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS10900 8847a067be702fcae9e13a0775525c81 187 Gene3D G3DSA:2.60.120.10 111 182 1.2E-22 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS10900 8847a067be702fcae9e13a0775525c81 187 PANTHER PTHR10245 4 182 6.1E-33 T 13-09-2016 PMA3_RS10900 8847a067be702fcae9e13a0775525c81 187 SMART SM00530 18 73 6.6E-14 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS10900 8847a067be702fcae9e13a0775525c81 187 Pfam PF07883 Cupin domain 115 182 4.7E-11 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS10900 8847a067be702fcae9e13a0775525c81 187 SUPERFAMILY SSF47413 11 78 1.02E-15 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS10900 8847a067be702fcae9e13a0775525c81 187 Pfam PF01381 Helix-turn-helix 20 73 1.2E-12 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS10900 8847a067be702fcae9e13a0775525c81 187 PANTHER PTHR10245:SF9 4 182 6.1E-33 T 13-09-2016 PMA3_RS10900 8847a067be702fcae9e13a0775525c81 187 Gene3D G3DSA:1.10.260.40 17 110 1.5E-19 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 Pfam PF12631 MnmE helical domain 123 453 7.3E-57 T 13-09-2016 IPR025867 MnmE, helical domain PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 Pfam PF01926 50S ribosome-binding GTPase 219 308 1.5E-23 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 SUPERFAMILY SSF116878 381 456 2.62E-49 T 13-09-2016 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 SUPERFAMILY SSF116878 121 220 2.62E-49 T 13-09-2016 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 SUPERFAMILY SSF52540 188 345 2.23E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 SUPERFAMILY SSF52540 73 152 2.23E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 PANTHER PTHR11649:SF56 9 456 1.8E-161 T 13-09-2016 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 Gene3D G3DSA:1.20.120.430 122 182 1.4E-57 T 13-09-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 Gene3D G3DSA:1.20.120.430 386 456 1.4E-57 T 13-09-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 Gene3D G3DSA:1.20.120.430 248 271 1.4E-57 T 13-09-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 1.0E-36 T 13-09-2016 IPR018948 GTP-binding protein TrmE, N-terminal PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 Gene3D G3DSA:3.40.50.300 195 247 8.8E-9 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 PANTHER PTHR11649 9 456 1.8E-161 T 13-09-2016 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 456 3.1E-103 T 13-09-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 456 32.733 T 13-09-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 Gene3D G3DSA:3.40.50.300 286 378 6.6E-6 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 Gene3D G3DSA:3.30.1360.120 5 121 1.1E-42 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 286 304 5.2E-5 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 5.2E-5 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS30080 3ea24b96c75f124873d804135ce2043d 456 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 217 341 7.7E-20 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS19900 6a43e1466804eabfa68ea9b141819408 367 Gene3D G3DSA:3.40.250.10 15 132 1.4E-26 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS19900 6a43e1466804eabfa68ea9b141819408 367 SUPERFAMILY SSF52821 92 156 2.88E-18 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS19900 6a43e1466804eabfa68ea9b141819408 367 SUPERFAMILY SSF52821 5 64 2.88E-18 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS19900 6a43e1466804eabfa68ea9b141819408 367 PANTHER PTHR30401:SF0 6 362 1.2E-173 T 13-09-2016 PMA3_RS19900 6a43e1466804eabfa68ea9b141819408 367 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 346 2.4E-109 T 13-09-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 PMA3_RS19900 6a43e1466804eabfa68ea9b141819408 367 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 362 53.662 T 13-09-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 PMA3_RS19900 6a43e1466804eabfa68ea9b141819408 367 Gene3D G3DSA:3.40.50.300 144 254 1.3E-4 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19900 6a43e1466804eabfa68ea9b141819408 367 PANTHER PTHR30401 6 362 1.2E-173 T 13-09-2016 PMA3_RS18130 8f43f62643b39e951088d749efa15e87 191 SUPERFAMILY SSF52499 5 183 9.29E-45 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS18130 8f43f62643b39e951088d749efa15e87 191 Pfam PF00857 Isochorismatase family 5 186 1.7E-38 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS18130 8f43f62643b39e951088d749efa15e87 191 PANTHER PTHR11080 1 178 6.5E-33 T 13-09-2016 PMA3_RS18130 8f43f62643b39e951088d749efa15e87 191 Gene3D G3DSA:3.40.50.850 2 184 5.6E-49 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 Gene3D G3DSA:3.30.450.20 492 643 4.4E-24 T 13-09-2016 PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 SMART SM00267 629 797 8.4E-58 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 SUPERFAMILY SSF55785 380 505 1.4E-16 T 13-09-2016 IPR000014 PAS domain PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 SUPERFAMILY SSF55073 645 794 1.65E-43 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 PANTHER PTHR10799 16 40 3.7E-20 T 13-09-2016 PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 SUPERFAMILY SSF55785 495 627 2.66E-12 T 13-09-2016 IPR000014 PAS domain PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 Pfam PF03924 CHASE domain 88 274 5.5E-39 T 13-09-2016 IPR006189 CHASE domain PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 637 795 8.5E-44 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 SMART SM00091 367 436 2.1E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 SMART SM00091 510 582 71.0 T 13-09-2016 IPR000014 PAS domain PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 Pfam PF00989 PAS fold 369 495 1.1E-8 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 Pfam PF00990 Diguanylate cyclase, GGDEF domain 641 793 1.2E-41 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 Pfam PF08447 PAS fold 536 609 1.2E-9 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 Gene3D G3DSA:3.30.70.270 644 795 2.0E-48 T 13-09-2016 PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 377 505 8.1E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 PANTHER PTHR10799:SF774 16 40 3.7E-20 T 13-09-2016 PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 PANTHER PTHR10799:SF774 495 793 3.7E-20 T 13-09-2016 PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 SMART SM00086 456 498 2.1E-4 T 13-09-2016 IPR001610 PAC motif PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 SMART SM00086 588 629 16.0 T 13-09-2016 IPR001610 PAC motif PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 PANTHER PTHR10799 495 793 3.7E-20 T 13-09-2016 PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 Gene3D G3DSA:3.30.450.20 353 491 3.2E-20 T 13-09-2016 PMA3_RS20380 6945be7422aa3daa47ebd3a0382b4573 799 SMART SM01079 85 276 2.7E-47 T 13-09-2016 IPR006189 CHASE domain PMA3_RS01430 88f42e2f88331cf6b41cd5d1e9c11bce 125 PANTHER PTHR35303:SF1 2 125 4.2E-65 T 13-09-2016 PMA3_RS01430 88f42e2f88331cf6b41cd5d1e9c11bce 125 PANTHER PTHR35303 2 125 4.2E-65 T 13-09-2016 PMA3_RS01430 88f42e2f88331cf6b41cd5d1e9c11bce 125 Pfam PF06155 Protein of unknown function (DUF971) 8 90 4.2E-26 T 13-09-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 PMA3_RS12305 3c78229e9ecaccfd83b7fb78a4f5cfea 519 Pfam PF03741 Integral membrane protein TerC family 14 203 2.3E-47 T 13-09-2016 IPR005496 Integral membrane protein TerC GO:0016021 PMA3_RS12305 3c78229e9ecaccfd83b7fb78a4f5cfea 519 PANTHER PTHR22777 1 517 3.4E-271 T 13-09-2016 PMA3_RS12305 3c78229e9ecaccfd83b7fb78a4f5cfea 519 Gene3D G3DSA:3.10.580.10 291 418 3.7E-11 T 13-09-2016 PMA3_RS12305 3c78229e9ecaccfd83b7fb78a4f5cfea 519 Pfam PF03471 Transporter associated domain 441 516 2.9E-16 T 13-09-2016 IPR005170 Transporter-associated domain PMA3_RS12305 3c78229e9ecaccfd83b7fb78a4f5cfea 519 SUPERFAMILY SSF56176 441 516 9.27E-17 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS12305 3c78229e9ecaccfd83b7fb78a4f5cfea 519 Pfam PF00571 CBS domain 386 425 9.4E-6 T 13-09-2016 IPR000644 CBS domain PMA3_RS12305 3c78229e9ecaccfd83b7fb78a4f5cfea 519 PANTHER PTHR22777:SF14 1 517 3.4E-271 T 13-09-2016 PMA3_RS12305 3c78229e9ecaccfd83b7fb78a4f5cfea 519 SMART SM01091 439 518 4.6E-21 T 13-09-2016 IPR005170 Transporter-associated domain PMA3_RS12305 3c78229e9ecaccfd83b7fb78a4f5cfea 519 Gene3D G3DSA:3.30.465.10 419 516 2.5E-21 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS12305 3c78229e9ecaccfd83b7fb78a4f5cfea 519 SUPERFAMILY SSF54631 293 428 2.0E-20 T 13-09-2016 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 PIRSF PIRSF001500 1 364 4.7E-146 T 13-09-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 Gene3D G3DSA:3.30.70.260 275 362 7.5E-31 T 13-09-2016 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 SMART SM00830 10 94 4.7E-28 T 13-09-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 SUPERFAMILY SSF53850 95 280 1.09E-60 T 13-09-2016 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 PANTHER PTHR21022 3 360 1.9E-139 T 13-09-2016 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 Gene3D G3DSA:1.20.59.10 2 92 4.7E-22 T 13-09-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 Pfam PF00800 Prephenate dehydratase 96 273 1.5E-61 T 13-09-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 309 316 - T 13-09-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 Pfam PF01817 Chorismate mutase type II 10 92 1.1E-21 T 13-09-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 Gene3D G3DSA:3.40.190.10 181 259 3.8E-30 T 13-09-2016 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 SUPERFAMILY SSF55021 266 361 9.16E-28 T 13-09-2016 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 247 269 - T 13-09-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 SUPERFAMILY SSF48600 5 98 1.23E-18 T 13-09-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 Pfam PF01842 ACT domain 282 346 9.0E-11 T 13-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 PANTHER PTHR21022:SF0 3 360 1.9E-139 T 13-09-2016 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 Gene3D G3DSA:3.40.190.10 93 180 1.1E-31 T 13-09-2016 PMA3_RS20965 6e2a1965303cc677a285839597a9d148 364 TIGRFAM TIGR01807 CM_P2: chorismate mutase 6 84 9.4E-31 T 13-09-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 PMA3_RS18690 e27a36638f967f235d02fdde7656f457 258 PANTHER PTHR11941:SF54 3 255 4.3E-118 T 13-09-2016 PMA3_RS18690 e27a36638f967f235d02fdde7656f457 258 PANTHER PTHR11941 3 255 4.3E-118 T 13-09-2016 PMA3_RS18690 e27a36638f967f235d02fdde7656f457 258 SUPERFAMILY SSF52096 1 258 3.17E-88 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS18690 e27a36638f967f235d02fdde7656f457 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 1.6E-81 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS18690 e27a36638f967f235d02fdde7656f457 258 Gene3D G3DSA:3.90.226.10 2 256 1.3E-95 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 Hamap MF_00347 Polyphosphate kinase [ppk]. 54 733 33.973 T 13-09-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 SUPERFAMILY SSF56024 552 732 5.16E-70 T 13-09-2016 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 PANTHER PTHR30218:SF0 20 732 0.0 T 13-09-2016 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 57 730 4.5E-282 T 13-09-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 Gene3D G3DSA:3.30.1840.10 160 352 2.1E-68 T 13-09-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 PIRSF PIRSF015589 31 735 2.5E-285 T 13-09-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 Pfam PF13089 Polyphosphate kinase N-terminal domain 57 162 6.0E-34 T 13-09-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 Pfam PF02503 Polyphosphate kinase middle domain 173 373 1.1E-62 T 13-09-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 Gene3D G3DSA:3.30.870.10 367 551 2.4E-71 T 13-09-2016 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 Gene3D G3DSA:3.30.870.10 552 732 1.1E-73 T 13-09-2016 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 SUPERFAMILY SSF143724 160 359 7.26E-62 T 13-09-2016 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 SUPERFAMILY SSF140356 54 158 1.83E-36 T 13-09-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 PANTHER PTHR30218 20 732 0.0 T 13-09-2016 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 SUPERFAMILY SSF56024 367 548 2.17E-54 T 13-09-2016 PMA3_RS29145 96c2841c05e5b8b73917a85f599a1b87 740 Pfam PF13090 Polyphosphate kinase C-terminal domain 382 729 4.9E-149 T 13-09-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 PMA3_RS09030 1d552d13c465f73f0a8f9cf936307f38 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 13-09-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PMA3_RS09030 1d552d13c465f73f0a8f9cf936307f38 360 PANTHER PTHR11835 2 360 1.2E-205 T 13-09-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PMA3_RS09030 1d552d13c465f73f0a8f9cf936307f38 360 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 1.6E-158 T 13-09-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 PMA3_RS09030 1d552d13c465f73f0a8f9cf936307f38 360 PANTHER PTHR11835:SF35 2 360 1.2E-205 T 13-09-2016 PMA3_RS09030 1d552d13c465f73f0a8f9cf936307f38 360 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 52.836 T 13-09-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 PMA3_RS09030 1d552d13c465f73f0a8f9cf936307f38 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 2.5E-137 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS09030 1d552d13c465f73f0a8f9cf936307f38 360 Gene3D G3DSA:3.40.718.10 2 357 2.3E-129 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS09030 1d552d13c465f73f0a8f9cf936307f38 360 SMART SM01329 4 353 1.1E-207 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS09030 1d552d13c465f73f0a8f9cf936307f38 360 SUPERFAMILY SSF53659 1 357 1.01E-125 T 13-09-2016 PMA3_RS17680 2953c3b149e207eb03f51ac3600e6e7a 395 Pfam PF00482 Type II secretion system (T2SS), protein F 265 386 8.6E-27 T 13-09-2016 IPR018076 Type II secretion system F domain PMA3_RS17680 2953c3b149e207eb03f51ac3600e6e7a 395 Pfam PF00482 Type II secretion system (T2SS), protein F 62 185 3.3E-29 T 13-09-2016 IPR018076 Type II secretion system F domain PMA3_RS17680 2953c3b149e207eb03f51ac3600e6e7a 395 PANTHER PTHR30012 1 395 1.1E-95 T 13-09-2016 PMA3_RS17680 2953c3b149e207eb03f51ac3600e6e7a 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 375 394 2.4E-18 T 13-09-2016 IPR003004 GspF/PilC family PMA3_RS17680 2953c3b149e207eb03f51ac3600e6e7a 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 157 185 2.4E-18 T 13-09-2016 IPR003004 GspF/PilC family PMA3_RS17680 2953c3b149e207eb03f51ac3600e6e7a 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 58 70 2.4E-18 T 13-09-2016 IPR003004 GspF/PilC family PMA3_RS17680 2953c3b149e207eb03f51ac3600e6e7a 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 359 373 2.4E-18 T 13-09-2016 IPR003004 GspF/PilC family PMA3_RS17680 2953c3b149e207eb03f51ac3600e6e7a 395 PANTHER PTHR30012:SF0 1 395 1.1E-95 T 13-09-2016 PMA3_RS11840 8b9535ca44cc1f691576da28044c4e57 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 2.5E-20 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11840 8b9535ca44cc1f691576da28044c4e57 385 Gene3D G3DSA:1.10.540.10 1 118 3.2E-26 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11840 8b9535ca44cc1f691576da28044c4e57 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 218 3.8E-22 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS11840 8b9535ca44cc1f691576da28044c4e57 385 PANTHER PTHR10909 1 385 3.8E-137 T 13-09-2016 PMA3_RS11840 8b9535ca44cc1f691576da28044c4e57 385 PANTHER PTHR10909:SF229 1 385 3.8E-137 T 13-09-2016 PMA3_RS11840 8b9535ca44cc1f691576da28044c4e57 385 Gene3D G3DSA:1.20.140.10 221 385 6.5E-28 T 13-09-2016 PMA3_RS11840 8b9535ca44cc1f691576da28044c4e57 385 Gene3D G3DSA:2.40.110.10 123 220 3.4E-33 T 13-09-2016 PMA3_RS11840 8b9535ca44cc1f691576da28044c4e57 385 SUPERFAMILY SSF47203 230 383 7.09E-18 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11840 8b9535ca44cc1f691576da28044c4e57 385 SUPERFAMILY SSF56645 2 239 1.83E-66 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS11840 8b9535ca44cc1f691576da28044c4e57 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 381 1.4E-18 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11805 151a38e9b635ed70bd59552b43693bfa 390 Gene3D G3DSA:1.10.540.10 1 118 2.9E-18 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11805 151a38e9b635ed70bd59552b43693bfa 390 SUPERFAMILY SSF47203 229 387 2.58E-37 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11805 151a38e9b635ed70bd59552b43693bfa 390 Gene3D G3DSA:2.40.110.10 131 221 1.2E-10 T 13-09-2016 PMA3_RS11805 151a38e9b635ed70bd59552b43693bfa 390 Gene3D G3DSA:1.20.140.10 229 388 3.3E-37 T 13-09-2016 PMA3_RS11805 151a38e9b635ed70bd59552b43693bfa 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 8.2E-15 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11805 151a38e9b635ed70bd59552b43693bfa 390 PANTHER PTHR10909:SF302 1 387 8.9E-89 T 13-09-2016 PMA3_RS11805 151a38e9b635ed70bd59552b43693bfa 390 PANTHER PTHR10909 1 387 8.9E-89 T 13-09-2016 PMA3_RS11805 151a38e9b635ed70bd59552b43693bfa 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 385 3.8E-27 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11805 151a38e9b635ed70bd59552b43693bfa 390 SUPERFAMILY SSF56645 2 225 8.9E-39 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF52777 2966 3216 2.0E-44 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00501 AMP-binding enzyme 3719 4122 3.3E-80 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00501 AMP-binding enzyme 15 452 5.2E-83 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00501 AMP-binding enzyme 2191 2594 1.1E-88 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00501 AMP-binding enzyme 1132 1528 1.0E-99 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2732 2747 - T 13-09-2016 IPR006162 Phosphopantetheine attachment site PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF52777 1911 2159 4.0E-61 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF52777 2784 2980 4.78E-39 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:1.10.1200.10 2712 2774 8.7E-27 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:1.10.1200.10 1641 1706 3.3E-25 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:1.10.1200.10 4222 4304 9.9E-30 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:1.10.1200.10 571 653 2.0E-21 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3087 3240 1.9E-45 T 13-09-2016 IPR010060 Non-ribosomal peptide synthase PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.40.50.980 1281 1440 3.0E-45 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.40.50.980 2345 2504 2.1E-38 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.40.50.980 171 335 6.0E-31 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.40.50.980 3876 4026 4.2E-40 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.40.50.980 2184 2344 1.3E-50 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.40.50.980 1124 1280 1.1E-49 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.40.50.980 3712 3875 4.4E-40 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.30.300.30 4116 4217 3.9E-34 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF56801 2149 2721 2.75E-153 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF47336 1630 1739 5.76E-19 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF13193 AMP-binding enzyme C-terminal domain 4130 4207 1.6E-9 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF13193 AMP-binding enzyme C-terminal domain 1536 1613 7.5E-6 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF13193 AMP-binding enzyme C-terminal domain 2602 2682 1.5E-11 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2335 2346 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF47336 2700 2770 1.14E-18 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00550 Phosphopantetheine attachment site 2711 2770 1.9E-14 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00550 Phosphopantetheine attachment site 587 646 7.5E-14 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00550 Phosphopantetheine attachment site 4236 4299 1.4E-15 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00550 Phosphopantetheine attachment site 1638 1701 2.9E-12 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 PANTHER PTHR24095:SF173 3225 4207 0.0 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 PANTHER PTHR24095:SF173 3195 3208 0.0 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2212 2618 4.0E-124 T 13-09-2016 IPR010071 Amino acid adenylation domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1153 1552 7.1E-132 T 13-09-2016 IPR010071 Amino acid adenylation domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3740 4146 3.0E-121 T 13-09-2016 IPR010071 Amino acid adenylation domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 PANTHER PTHR24095 3225 4207 0.0 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 PANTHER PTHR24095 3195 3208 0.0 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF56801 3684 4247 3.14E-144 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF56801 8 561 2.75E-117 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF52777 3432 3682 3.45E-49 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 PANTHER PTHR24095 1303 2763 0.0 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF52777 3253 3430 5.67E-44 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF13745 HxxPF-repeated domain 2046 2137 1.0E-27 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF13745 HxxPF-repeated domain 991 1079 1.4E-22 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 PANTHER PTHR24095:SF173 1303 2763 0.0 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SMART SM00823 Phosphopantetheine attachment site 2708 2776 0.019 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SMART SM00823 Phosphopantetheine attachment site 1637 1706 0.066 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SMART SM00823 Phosphopantetheine attachment site 4234 4303 6.5E-5 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SMART SM00823 Phosphopantetheine attachment site 582 651 1.8E-6 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.40.50.980 10 170 1.4E-31 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 ProSitePatterns PS00012 Phosphopantetheine attachment site. 606 621 - T 13-09-2016 IPR006162 Phosphopantetheine attachment site PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF52777 1728 1905 1.11E-50 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF52777 673 849 3.89E-49 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3867 3878 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.30.300.30 443 552 4.7E-14 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1272 1283 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00668 Condensation domain 2788 3080 9.5E-62 T 13-09-2016 IPR001242 Condensation domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00668 Condensation domain 670 968 8.3E-76 T 13-09-2016 IPR001242 Condensation domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00668 Condensation domain 1723 2024 3.0E-72 T 13-09-2016 IPR001242 Condensation domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Pfam PF00668 Condensation domain 3248 3552 3.6E-64 T 13-09-2016 IPR001242 Condensation domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF52777 856 1096 2.11E-57 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4258 4273 - T 13-09-2016 IPR006162 Phosphopantetheine attachment site PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:2.30.38.10 365 442 3.6E-19 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF47336 580 682 9.16E-17 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:2.30.38.10 1441 1517 7.5E-26 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:2.30.38.10 4034 4112 3.7E-23 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:2.30.38.10 2505 2584 1.5E-23 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.30.300.30 1523 1640 2.5E-37 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 Gene3D G3DSA:3.30.300.30 2589 2711 6.2E-40 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF56801 1092 1650 7.46E-161 T 13-09-2016 PMA3_RS07265 b88ec7bc97f0a8b73c2e5376b26bee16 4325 SUPERFAMILY SSF47336 4226 4300 1.57E-21 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS07810 0355892a107ecf0e963a8b2b09494ba5 167 PANTHER PTHR21221:SF2 1 165 7.5E-92 T 13-09-2016 PMA3_RS07810 0355892a107ecf0e963a8b2b09494ba5 167 Hamap MF_00616 Ureidoglycolate lyase [allA]. 2 163 41.12 T 13-09-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 PMA3_RS07810 0355892a107ecf0e963a8b2b09494ba5 167 Pfam PF04115 Ureidoglycolate lyase 2 158 1.4E-52 T 13-09-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 PMA3_RS07810 0355892a107ecf0e963a8b2b09494ba5 167 Gene3D G3DSA:2.60.120.480 2 163 2.3E-60 T 13-09-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 PMA3_RS07810 0355892a107ecf0e963a8b2b09494ba5 167 SUPERFAMILY SSF51182 1 162 5.78E-58 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS07810 0355892a107ecf0e963a8b2b09494ba5 167 PANTHER PTHR21221 1 165 7.5E-92 T 13-09-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 PMA3_RS07810 0355892a107ecf0e963a8b2b09494ba5 167 PIRSF PIRSF017306 2 163 4.3E-49 T 13-09-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 PMA3_RS30275 018a298153f0f276d812eeda9d9412a3 267 SMART SM00382 37 227 1.0E-13 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS30275 018a298153f0f276d812eeda9d9412a3 267 PANTHER PTHR24220 14 253 5.3E-136 T 13-09-2016 PMA3_RS30275 018a298153f0f276d812eeda9d9412a3 267 Gene3D G3DSA:3.40.50.300 11 232 6.3E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30275 018a298153f0f276d812eeda9d9412a3 267 SUPERFAMILY SSF52540 11 234 1.78E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30275 018a298153f0f276d812eeda9d9412a3 267 PANTHER PTHR24220:SF483 14 253 5.3E-136 T 13-09-2016 PMA3_RS30275 018a298153f0f276d812eeda9d9412a3 267 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS30275 018a298153f0f276d812eeda9d9412a3 267 Pfam PF00005 ABC transporter 30 178 6.0E-30 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS10905 0af696b5cd768972562a171fdbd1e9cc 477 PANTHER PTHR40254:SF1 1 474 1.0E-60 T 13-09-2016 PMA3_RS10905 0af696b5cd768972562a171fdbd1e9cc 477 Gene3D G3DSA:3.50.50.60 15 222 3.9E-17 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10905 0af696b5cd768972562a171fdbd1e9cc 477 SUPERFAMILY SSF51905 15 83 2.37E-19 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10905 0af696b5cd768972562a171fdbd1e9cc 477 SUPERFAMILY SSF51905 112 248 2.37E-19 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10905 0af696b5cd768972562a171fdbd1e9cc 477 Gene3D G3DSA:3.50.50.60 363 398 7.0E-4 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10905 0af696b5cd768972562a171fdbd1e9cc 477 Gene3D G3DSA:3.50.50.60 223 272 7.0E-4 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10905 0af696b5cd768972562a171fdbd1e9cc 477 Pfam PF13454 FAD-NAD(P)-binding 20 177 1.2E-28 T 13-09-2016 PMA3_RS10905 0af696b5cd768972562a171fdbd1e9cc 477 PANTHER PTHR40254 1 474 1.0E-60 T 13-09-2016 PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 Pfam PF01546 Peptidase family M20/M25/M40 78 402 6.4E-29 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 SUPERFAMILY SSF55031 211 302 2.99E-21 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 Gene3D G3DSA:3.30.70.360 224 320 1.4E-29 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 10 404 1.3E-110 T 13-09-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 PANTHER PTHR32494 1 403 4.0E-134 T 13-09-2016 PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 SUPERFAMILY SSF53187 333 406 4.78E-77 T 13-09-2016 PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 SUPERFAMILY SSF53187 3 221 4.78E-77 T 13-09-2016 PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 Gene3D G3DSA:3.40.630.10 348 407 3.0E-99 T 13-09-2016 PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 Gene3D G3DSA:3.40.630.10 4 223 3.0E-99 T 13-09-2016 PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 PIRSF PIRSF001235 5 410 8.9E-118 T 13-09-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 PMA3_RS14600 bfe8451a114d1cf18dc76a13f5f2c30a 410 Pfam PF07687 Peptidase dimerisation domain 209 308 1.7E-5 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS03920 5eea17f0e86692a13272a7d657dcbb69 332 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 331 39.1 T 13-09-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS03920 5eea17f0e86692a13272a7d657dcbb69 332 PANTHER PTHR18895:SF70 69 329 4.5E-84 T 13-09-2016 PMA3_RS03920 5eea17f0e86692a13272a7d657dcbb69 332 Gene3D G3DSA:3.40.50.150 159 308 1.8E-19 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS03920 5eea17f0e86692a13272a7d657dcbb69 332 SUPERFAMILY SSF53335 151 309 3.47E-26 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS03920 5eea17f0e86692a13272a7d657dcbb69 332 Pfam PF08468 Methyltransferase small domain N-terminal 5 153 4.0E-40 T 13-09-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS03920 5eea17f0e86692a13272a7d657dcbb69 332 Pfam PF05175 Methyltransferase small domain 162 328 3.5E-53 T 13-09-2016 IPR007848 Methyltransferase small domain GO:0008168 PMA3_RS03920 5eea17f0e86692a13272a7d657dcbb69 332 PANTHER PTHR18895 69 329 4.5E-84 T 13-09-2016 PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 SUPERFAMILY SSF53774 7 334 2.09E-84 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 14 22 - T 13-09-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 PANTHER PTHR11707:SF3 10 334 2.6E-80 T 13-09-2016 PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 Gene3D G3DSA:3.40.50.40 209 334 1.9E-41 T 13-09-2016 IPR027473 L-asparaginase, C-terminal domain PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 Gene3D G3DSA:3.40.50.1170 10 183 1.3E-45 T 13-09-2016 IPR027474 L-asparaginase, N-terminal PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 PANTHER PTHR11707 10 334 2.6E-80 T 13-09-2016 PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 PRINTS PR00139 Asparaginase/glutaminase family signature 12 23 4.9E-14 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 PRINTS PR00139 Asparaginase/glutaminase family signature 259 277 4.9E-14 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 PRINTS PR00139 Asparaginase/glutaminase family signature 91 109 4.9E-14 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 Pfam PF00710 Asparaginase, N-terminal 11 182 3.0E-42 T 13-09-2016 IPR027474 L-asparaginase, N-terminal PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 PIRSF PIRSF001220 8 333 3.1E-67 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 PIRSF PIRSF500176 8 331 3.2E-80 T 13-09-2016 PMA3_RS29770 a81e4f44f5e75813dea9656321ddcba0 334 SMART SM00870 11 322 3.8E-94 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PANTHER PTHR32063 1 1004 0.0 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 Gene3D G3DSA:3.30.70.1440 794 822 5.8E-9 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 Gene3D G3DSA:3.30.70.1440 651 697 5.8E-9 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 SUPERFAMILY SSF82714 699 783 2.62E-18 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS23645 66d24084526c37192b6760d746365683 1012 Gene3D G3DSA:1.20.1640.10 823 1011 8.1E-48 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 SUPERFAMILY SSF82693 553 650 3.92E-22 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 Gene3D G3DSA:3.30.70.1430 42 141 1.8E-24 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 SUPERFAMILY SSF82693 42 132 2.62E-21 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 SUPERFAMILY SSF82693 650 698 2.2E-15 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 SUPERFAMILY SSF82693 785 832 2.2E-15 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 SUPERFAMILY SSF82714 183 265 2.22E-15 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS23645 66d24084526c37192b6760d746365683 1012 Gene3D G3DSA:1.10.3850.10 273 490 8.3E-62 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 Pfam PF00873 AcrB/AcrD/AcrF family 6 1002 1.2E-276 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 Gene3D G3DSA:3.30.2090.10 699 783 1.4E-18 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PANTHER PTHR32063:SF14 1 1004 0.0 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 Gene3D G3DSA:3.30.2090.10 183 268 5.2E-17 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.5E-78 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.5E-78 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.5E-78 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.5E-78 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.5E-78 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 2.5E-78 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.5E-78 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.5E-78 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.5E-78 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 SUPERFAMILY SSF82693 267 323 9.59E-22 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 SUPERFAMILY SSF82693 138 181 9.59E-22 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 Gene3D G3DSA:3.30.70.1430 555 650 1.2E-15 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 SUPERFAMILY SSF82866 808 1003 8.89E-44 T 13-09-2016 PMA3_RS23645 66d24084526c37192b6760d746365683 1012 SUPERFAMILY SSF82866 289 490 1.18E-50 T 13-09-2016 PMA3_RS17840 02b1bad5a7b8dd7e8f72c8e665fcd455 230 Pfam PF08808 RES domain 73 218 3.9E-25 T 13-09-2016 IPR014914 RES domain PMA3_RS17840 02b1bad5a7b8dd7e8f72c8e665fcd455 230 SMART SM00953 82 210 6.8E-31 T 13-09-2016 IPR014914 RES domain PMA3_RS29350 b5fbf616ebd875ad9746a1d932e149b7 807 Pfam PF00082 Subtilase family 256 574 4.6E-39 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS29350 b5fbf616ebd875ad9746a1d932e149b7 807 Gene3D G3DSA:3.40.50.200 257 610 2.8E-42 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS29350 b5fbf616ebd875ad9746a1d932e149b7 807 PRINTS PR00723 Subtilisin serine protease family (S8) signature 536 552 3.9E-10 T 13-09-2016 IPR015500 Peptidase S8, subtilisin-related PMA3_RS29350 b5fbf616ebd875ad9746a1d932e149b7 807 PRINTS PR00723 Subtilisin serine protease family (S8) signature 253 272 3.9E-10 T 13-09-2016 IPR015500 Peptidase S8, subtilisin-related PMA3_RS29350 b5fbf616ebd875ad9746a1d932e149b7 807 PRINTS PR00723 Subtilisin serine protease family (S8) signature 290 303 3.9E-10 T 13-09-2016 IPR015500 Peptidase S8, subtilisin-related PMA3_RS29350 b5fbf616ebd875ad9746a1d932e149b7 807 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 258 269 - T 13-09-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site PMA3_RS29350 b5fbf616ebd875ad9746a1d932e149b7 807 SUPERFAMILY SSF52743 196 620 4.32E-49 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS25455 f945ef14b69236b78a63cf022f6cc0f4 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 25 113 3.6E-26 T 13-09-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 PMA3_RS25455 f945ef14b69236b78a63cf022f6cc0f4 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 17 279 2.0E-94 T 13-09-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 PMA3_RS25455 f945ef14b69236b78a63cf022f6cc0f4 282 PANTHER PTHR32179 1 280 7.8E-126 T 13-09-2016 PMA3_RS25455 f945ef14b69236b78a63cf022f6cc0f4 282 SUPERFAMILY SSF54675 11 114 8.48E-34 T 13-09-2016 PMA3_RS25455 f945ef14b69236b78a63cf022f6cc0f4 282 Gene3D G3DSA:3.20.20.70 136 269 5.6E-59 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS25455 f945ef14b69236b78a63cf022f6cc0f4 282 SUPERFAMILY SSF51690 115 280 3.81E-59 T 13-09-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PMA3_RS25455 f945ef14b69236b78a63cf022f6cc0f4 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 115 279 5.3E-56 T 13-09-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PMA3_RS25455 f945ef14b69236b78a63cf022f6cc0f4 282 Gene3D G3DSA:3.90.1170.20 10 135 2.9E-51 T 13-09-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 PMA3_RS25455 f945ef14b69236b78a63cf022f6cc0f4 282 PIRSF PIRSF006250 7 282 8.1E-104 T 13-09-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 PANTHER PTHR24421 14 30 4.3E-36 T 13-09-2016 PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 SMART SM00065 42 169 0.0045 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 Gene3D G3DSA:3.30.565.10 274 388 2.4E-10 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 SMART SM00387 292 390 2.2E-6 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 SUPERFAMILY SSF55874 269 387 3.42E-15 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 293 387 4.3E-6 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 PANTHER PTHR24421 184 387 4.3E-36 T 13-09-2016 PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 Gene3D G3DSA:3.30.450.40 15 174 1.9E-64 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 PANTHER PTHR24421:SF23 184 387 4.3E-36 T 13-09-2016 PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 PANTHER PTHR24421:SF23 14 30 4.3E-36 T 13-09-2016 PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 SUPERFAMILY SSF55781 25 174 5.45E-13 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS11970 4fbcb564af02cadaec0a453810f686dc 395 Pfam PF07730 Histidine kinase 189 256 2.6E-13 T 13-09-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PMA3_RS18890 fe08dce1e1175226970d740b9629dfe9 344 Pfam PF00355 Rieske [2Fe-2S] domain 22 100 1.6E-18 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS18890 fe08dce1e1175226970d740b9629dfe9 344 SUPERFAMILY SSF50022 16 129 1.11E-29 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS18890 fe08dce1e1175226970d740b9629dfe9 344 SUPERFAMILY SSF55961 136 333 2.93E-41 T 13-09-2016 PMA3_RS18890 fe08dce1e1175226970d740b9629dfe9 344 Gene3D G3DSA:2.102.10.10 20 133 9.5E-28 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS18890 fe08dce1e1175226970d740b9629dfe9 344 PANTHER PTHR21266:SF23 18 339 1.2E-82 T 13-09-2016 PMA3_RS18890 fe08dce1e1175226970d740b9629dfe9 344 PANTHER PTHR21266 18 339 1.2E-82 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 Gene3D G3DSA:3.90.640.10 298 352 7.6E-4 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 Pfam PF00012 Hsp70 protein 100 230 3.3E-10 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 Pfam PF00012 Hsp70 protein 298 395 2.6E-13 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 PANTHER PTHR19375:SF182 290 414 4.2E-119 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 PANTHER PTHR19375:SF182 7 240 4.2E-119 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 SUPERFAMILY SSF53067 10 176 3.45E-30 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 PANTHER PTHR19375 290 414 4.2E-119 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 PANTHER PTHR19375 7 240 4.2E-119 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 184 197 - T 13-09-2016 IPR018181 Heat shock protein 70, conserved site PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 Gene3D G3DSA:3.30.420.40 356 396 2.6E-16 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 Gene3D G3DSA:3.30.420.40 185 225 2.6E-16 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 Gene3D G3DSA:3.30.420.40 105 184 2.8E-30 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 Gene3D G3DSA:3.30.420.40 9 72 2.8E-30 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 PRINTS PR00301 70kDa heat shock protein signature 124 144 7.8E-6 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 PRINTS PR00301 70kDa heat shock protein signature 190 200 7.8E-6 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 PRINTS PR00301 70kDa heat shock protein signature 8 21 7.8E-6 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 PRINTS PR00301 70kDa heat shock protein signature 36 48 7.8E-6 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 SUPERFAMILY SSF53067 178 247 5.87E-38 T 13-09-2016 PMA3_RS02355 4c3973eb1e491938d7b9607732b9058b 424 SUPERFAMILY SSF53067 296 417 5.87E-38 T 13-09-2016 PMA3_RS08970 1e5ed1ce9d194e56f1f4e15f0426f1ae 206 Gene3D G3DSA:3.40.1130.10 35 200 1.8E-13 T 13-09-2016 PMA3_RS08970 1e5ed1ce9d194e56f1f4e15f0426f1ae 206 SMART SM00563 34 155 3.1E-16 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS08970 1e5ed1ce9d194e56f1f4e15f0426f1ae 206 PANTHER PTHR10434:SF21 6 204 1.0E-43 T 13-09-2016 PMA3_RS08970 1e5ed1ce9d194e56f1f4e15f0426f1ae 206 SUPERFAMILY SSF69593 16 204 8.89E-35 T 13-09-2016 PMA3_RS08970 1e5ed1ce9d194e56f1f4e15f0426f1ae 206 PANTHER PTHR10434 6 204 1.0E-43 T 13-09-2016 PMA3_RS08970 1e5ed1ce9d194e56f1f4e15f0426f1ae 206 Pfam PF01553 Acyltransferase 34 152 2.6E-17 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS03250 a692cacd4c543f3eaf1ea1d0da2e53ed 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 2.9E-4 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS03250 a692cacd4c543f3eaf1ea1d0da2e53ed 237 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 27 1.6E-6 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PANTHER PTHR11686 29 575 9.0E-205 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 441 456 1.9E-80 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 376 394 1.9E-80 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 277 296 1.9E-80 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 57 82 1.9E-80 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 130 148 1.9E-80 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 465 482 1.9E-80 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 247 263 1.9E-80 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 167 1.9E-80 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 400 418 1.9E-80 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 PANTHER PTHR11686:SF9 29 575 9.0E-205 T 13-09-2016 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 376 400 - T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 SUPERFAMILY SSF56235 27 575 1.64E-181 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 Pfam PF01019 Gamma-glutamyltranspeptidase 50 568 7.1E-183 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS19480 ae901c46e0c1850e339225847b91ce1d 575 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 35 566 9.3E-176 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS29960 b8a8e04d80ac5a584574fb2a8ed6563b 711 Gene3D G3DSA:1.25.40.10 128 237 3.0E-4 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS29960 b8a8e04d80ac5a584574fb2a8ed6563b 711 Gene3D G3DSA:1.25.40.10 310 378 1.3E-4 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS29960 b8a8e04d80ac5a584574fb2a8ed6563b 711 SUPERFAMILY SSF48452 316 377 1.57E-5 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS29960 b8a8e04d80ac5a584574fb2a8ed6563b 711 SUPERFAMILY SSF48452 473 499 1.57E-5 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS29960 b8a8e04d80ac5a584574fb2a8ed6563b 711 SUPERFAMILY SSF48452 127 160 1.57E-5 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS15410 6a2d832cb48f864af1829d5ac9b3a293 357 PANTHER PTHR30465:SF66 61 352 6.1E-209 T 13-09-2016 PMA3_RS15410 6a2d832cb48f864af1829d5ac9b3a293 357 SUPERFAMILY SSF161098 123 334 9.16E-16 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS15410 6a2d832cb48f864af1829d5ac9b3a293 357 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 143 350 1.8E-36 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS15410 6a2d832cb48f864af1829d5ac9b3a293 357 PANTHER PTHR30465 1 45 6.1E-209 T 13-09-2016 PMA3_RS15410 6a2d832cb48f864af1829d5ac9b3a293 357 PANTHER PTHR30465 61 352 6.1E-209 T 13-09-2016 PMA3_RS15410 6a2d832cb48f864af1829d5ac9b3a293 357 PANTHER PTHR30465:SF66 1 45 6.1E-209 T 13-09-2016 PMA3_RS15410 6a2d832cb48f864af1829d5ac9b3a293 357 Gene3D G3DSA:1.10.3720.10 123 342 1.4E-16 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 PANTHER PTHR10395 1 117 7.6E-46 T 13-09-2016 PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 1.9E-39 T 13-09-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 SUPERFAMILY SSF49472 1 117 1.12E-41 T 13-09-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 13-09-2016 IPR023419 Transthyretin, conserved site PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 SMART SM00095 4 116 0.0055 T 13-09-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 Pfam PF00576 HIUase/Transthyretin family 4 116 6.0E-35 T 13-09-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 13-09-2016 IPR023418 Transthyretin, thyroxine binding site PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 PANTHER PTHR10395:SF7 1 117 7.6E-46 T 13-09-2016 PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 PRINTS PR00189 Transthyretin signature 95 117 1.9E-8 T 13-09-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 PRINTS PR00189 Transthyretin signature 3 23 1.9E-8 T 13-09-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase PMA3_RS07830 5d94fbe4e8514bddfb7126520cf6970d 117 Gene3D G3DSA:2.60.40.180 3 117 7.1E-37 T 13-09-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily PMA3_RS28330 3b297622a4bdfff3192855150a768d38 254 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 1 254 3.0E-136 T 13-09-2016 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 PMA3_RS28330 3b297622a4bdfff3192855150a768d38 254 Pfam PF03818 Malonate/sodium symporter MadM subunit 3 61 9.4E-29 T 13-09-2016 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal PMA3_RS02725 54e7178bb62dd1302cde96e176f2455a 184 SUPERFAMILY SSF81901 29 137 1.23E-23 T 13-09-2016 PMA3_RS02725 54e7178bb62dd1302cde96e176f2455a 184 SMART SM00671 99 134 7.2E-7 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS02725 54e7178bb62dd1302cde96e176f2455a 184 SMART SM00671 63 98 2.8E-10 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS02725 54e7178bb62dd1302cde96e176f2455a 184 Pfam PF08238 Sel1 repeat 63 98 1.2E-8 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS02725 54e7178bb62dd1302cde96e176f2455a 184 Pfam PF08238 Sel1 repeat 99 130 2.3E-4 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS02725 54e7178bb62dd1302cde96e176f2455a 184 PANTHER PTHR11102 35 138 3.2E-22 T 13-09-2016 PMA3_RS02725 54e7178bb62dd1302cde96e176f2455a 184 Gene3D G3DSA:1.25.40.10 28 139 8.1E-29 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24820 f3ef1f37b7d898a0fc3d239409120696 211 Gene3D G3DSA:1.20.1050.10 93 211 2.1E-42 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS24820 f3ef1f37b7d898a0fc3d239409120696 211 PANTHER PTHR11260 1 210 1.2E-71 T 13-09-2016 PMA3_RS24820 f3ef1f37b7d898a0fc3d239409120696 211 SUPERFAMILY SSF52833 1 93 8.08E-23 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS24820 f3ef1f37b7d898a0fc3d239409120696 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 82 9.7E-18 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS24820 f3ef1f37b7d898a0fc3d239409120696 211 Gene3D G3DSA:3.40.30.10 1 92 7.7E-29 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS24820 f3ef1f37b7d898a0fc3d239409120696 211 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 3 210 2.1E-82 T 13-09-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 PMA3_RS24820 f3ef1f37b7d898a0fc3d239409120696 211 SUPERFAMILY SSF47616 84 211 1.85E-26 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS24820 f3ef1f37b7d898a0fc3d239409120696 211 PANTHER PTHR11260:SF289 1 210 1.2E-71 T 13-09-2016 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PIRSF PIRSF019574 5 365 1.1E-141 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 Gene3D G3DSA:3.40.190.10 148 313 3.1E-74 T 13-09-2016 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 6.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 6.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 6.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 6.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 6.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 6.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 6.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 6.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 6.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 6.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 Gene3D G3DSA:3.40.190.10 28 147 2.5E-25 T 13-09-2016 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PANTHER PTHR30222:SF11 3 365 1.4E-191 T 13-09-2016 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 Pfam PF13416 Bacterial extracellular solute-binding protein 44 318 3.3E-33 T 13-09-2016 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 SUPERFAMILY SSF53850 27 364 4.64E-97 T 13-09-2016 PMA3_RS28880 b593482f677620fd3f31255e15c29e5d 365 PANTHER PTHR30222 3 365 1.4E-191 T 13-09-2016 PMA3_RS05005 c5fa6ec45541c092921f814a9ae40d35 155 Gene3D G3DSA:1.10.10.10 12 56 8.1E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05005 c5fa6ec45541c092921f814a9ae40d35 155 Pfam PF02631 RecX family 33 149 8.6E-30 T 13-09-2016 IPR003783 Regulatory protein RecX GO:0006282 PMA3_RS05005 c5fa6ec45541c092921f814a9ae40d35 155 Gene3D G3DSA:1.10.10.10 103 153 4.6E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05005 c5fa6ec45541c092921f814a9ae40d35 155 Hamap MF_01114 Regulatory protein RecX [recX]. 2 155 13.262 T 13-09-2016 IPR003783 Regulatory protein RecX GO:0006282 PMA3_RS05005 c5fa6ec45541c092921f814a9ae40d35 155 Gene3D G3DSA:1.10.10.10 57 102 2.8E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05005 c5fa6ec45541c092921f814a9ae40d35 155 PANTHER PTHR33602:SF1 10 148 9.1E-38 T 13-09-2016 PMA3_RS05005 c5fa6ec45541c092921f814a9ae40d35 155 PANTHER PTHR33602 10 148 9.1E-38 T 13-09-2016 PMA3_RS03355 1e8d4b60db9fc59b5cbd82835443abab 455 PANTHER PTHR24064 2 439 3.4E-86 T 13-09-2016 PMA3_RS03355 1e8d4b60db9fc59b5cbd82835443abab 455 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 5 400 3.4E-127 T 13-09-2016 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0005215|GO:0006810|GO:0016021 PMA3_RS03355 1e8d4b60db9fc59b5cbd82835443abab 455 Gene3D G3DSA:1.20.1250.20 17 197 3.3E-40 T 13-09-2016 PMA3_RS03355 1e8d4b60db9fc59b5cbd82835443abab 455 SUPERFAMILY SSF103473 6 437 1.03E-85 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS03355 1e8d4b60db9fc59b5cbd82835443abab 455 Pfam PF07690 Major Facilitator Superfamily 27 314 7.9E-38 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS03355 1e8d4b60db9fc59b5cbd82835443abab 455 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS03355 1e8d4b60db9fc59b5cbd82835443abab 455 Gene3D G3DSA:1.20.1250.20 252 438 5.3E-24 T 13-09-2016 PMA3_RS03355 1e8d4b60db9fc59b5cbd82835443abab 455 PANTHER PTHR24064:SF234 2 439 3.4E-86 T 13-09-2016 PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 5.3E-32 T 13-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 Gene3D G3DSA:2.30.33.40 1 96 3.3E-35 T 13-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 SMART SM00883 2 95 5.6E-54 T 13-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 PRINTS PR00297 10kDa chaperonin signature 25 46 3.1E-31 T 13-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 PRINTS PR00297 10kDa chaperonin signature 60 72 3.1E-31 T 13-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 PRINTS PR00297 10kDa chaperonin signature 3 18 3.1E-31 T 13-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 PRINTS PR00297 10kDa chaperonin signature 82 95 3.1E-31 T 13-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 PANTHER PTHR10772 1 96 3.7E-40 T 13-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 SUPERFAMILY SSF50129 1 96 1.35E-33 T 13-09-2016 IPR011032 GroES-like PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-09-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 PMA3_RS23675 e457d2be1a6ea91ddf9ed5a72b2ab7d5 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 26.414 T 13-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PMA3_RS00680 c4285186410bf31019697417ff94beed 377 PANTHER PTHR24220:SF186 36 290 2.0E-139 T 13-09-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 PMA3_RS00680 c4285186410bf31019697417ff94beed 377 PANTHER PTHR24220 36 290 2.0E-139 T 13-09-2016 PMA3_RS00680 c4285186410bf31019697417ff94beed 377 Pfam PF09383 NIL domain 301 372 5.9E-17 T 13-09-2016 IPR018449 NIL domain PMA3_RS00680 c4285186410bf31019697417ff94beed 377 Pfam PF00005 ABC transporter 54 202 1.5E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS00680 c4285186410bf31019697417ff94beed 377 Gene3D G3DSA:3.40.50.300 35 268 3.1E-85 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00680 c4285186410bf31019697417ff94beed 377 SUPERFAMILY SSF55021 280 376 9.84E-17 T 13-09-2016 PMA3_RS00680 c4285186410bf31019697417ff94beed 377 Gene3D G3DSA:3.30.70.260 269 376 8.3E-22 T 13-09-2016 PMA3_RS00680 c4285186410bf31019697417ff94beed 377 SMART SM00382 63 251 5.7E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS00680 c4285186410bf31019697417ff94beed 377 SUPERFAMILY SSF52540 36 272 1.01E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00680 c4285186410bf31019697417ff94beed 377 SMART SM00930 298 373 1.8E-17 T 13-09-2016 IPR018449 NIL domain PMA3_RS00680 c4285186410bf31019697417ff94beed 377 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS17505 b10d14a8d8a4c8ae48191ec3fc932ef8 222 PANTHER PTHR24220 3 216 8.1E-91 T 13-09-2016 PMA3_RS17505 b10d14a8d8a4c8ae48191ec3fc932ef8 222 SUPERFAMILY SSF52540 1 217 3.73E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17505 b10d14a8d8a4c8ae48191ec3fc932ef8 222 SMART SM00382 30 215 3.5E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS17505 b10d14a8d8a4c8ae48191ec3fc932ef8 222 Gene3D G3DSA:3.40.50.300 1 216 2.1E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17505 b10d14a8d8a4c8ae48191ec3fc932ef8 222 Pfam PF00005 ABC transporter 21 166 1.9E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS17505 b10d14a8d8a4c8ae48191ec3fc932ef8 222 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS17505 b10d14a8d8a4c8ae48191ec3fc932ef8 222 PANTHER PTHR24220:SF430 3 216 8.1E-91 T 13-09-2016 PMA3_RS08175 7fab747f469faa710ee8bc5bc1003aaf 346 PANTHER PTHR11019 200 346 4.8E-37 T 13-09-2016 PMA3_RS08175 7fab747f469faa710ee8bc5bc1003aaf 346 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 211 3.3E-41 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS08175 7fab747f469faa710ee8bc5bc1003aaf 346 PANTHER PTHR11019:SF52 200 346 4.8E-37 T 13-09-2016 PMA3_RS08175 7fab747f469faa710ee8bc5bc1003aaf 346 Pfam PF12833 Helix-turn-helix domain 263 340 2.2E-14 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS08175 7fab747f469faa710ee8bc5bc1003aaf 346 SUPERFAMILY SSF46689 293 343 2.64E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS08175 7fab747f469faa710ee8bc5bc1003aaf 346 SMART SM00342 257 339 1.8E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS08175 7fab747f469faa710ee8bc5bc1003aaf 346 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 308 323 9.6E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS08175 7fab747f469faa710ee8bc5bc1003aaf 346 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 323 339 9.6E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS08175 7fab747f469faa710ee8bc5bc1003aaf 346 Gene3D G3DSA:1.10.10.60 293 344 3.4E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS08985 6b42c872b5727346a69ade70b8b650ba 584 PANTHER PTHR11614:SF106 1 303 9.1E-184 T 13-09-2016 PMA3_RS08985 6b42c872b5727346a69ade70b8b650ba 584 SUPERFAMILY SSF53335 390 574 4.51E-15 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS08985 6b42c872b5727346a69ade70b8b650ba 584 Gene3D G3DSA:3.40.50.150 391 575 7.1E-10 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS08985 6b42c872b5727346a69ade70b8b650ba 584 Gene3D G3DSA:3.40.50.1820 13 278 1.3E-35 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS08985 6b42c872b5727346a69ade70b8b650ba 584 PANTHER PTHR11614 1 303 9.1E-184 T 13-09-2016 PMA3_RS08985 6b42c872b5727346a69ade70b8b650ba 584 Pfam PF12147 Putative methyltransferase 274 582 4.4E-153 T 13-09-2016 IPR022744 Methyltransferase domain, putative PMA3_RS08985 6b42c872b5727346a69ade70b8b650ba 584 SUPERFAMILY SSF53474 4 282 5.13E-36 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS08985 6b42c872b5727346a69ade70b8b650ba 584 Pfam PF12146 Serine aminopeptidase, S33 30 265 5.3E-67 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 SUPERFAMILY SSF53167 10 487 2.09E-145 T 13-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 PANTHER PTHR21234:SF11 252 487 8.0E-119 T 13-09-2016 PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 PANTHER PTHR21234:SF11 182 227 8.0E-119 T 13-09-2016 PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 Hamap MF_01932 AMP nucleosidase [amn]. 4 487 58.726 T 13-09-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 Gene3D G3DSA:3.40.50.1580 176 468 3.3E-105 T 13-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 PANTHER PTHR21234 252 487 8.0E-119 T 13-09-2016 IPR018017 Nucleoside phosphorylase PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 PANTHER PTHR21234 182 227 8.0E-119 T 13-09-2016 IPR018017 Nucleoside phosphorylase PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 Pfam PF01048 Phosphorylase superfamily 272 435 6.3E-16 T 13-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 Gene3D G3DSA:3.30.1730.10 7 172 3.8E-54 T 13-09-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 12 487 7.6E-236 T 13-09-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PMA3_RS02755 7ebcab5b92aab1d66fa3f24c32056dce 487 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 13 168 1.0E-48 T 13-09-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PMA3_RS17725 92f6687004424f631bde07e12000c111 932 SMART SM00862 27 102 4.2E-17 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS17725 92f6687004424f631bde07e12000c111 932 SUPERFAMILY SSF52540 125 395 9.77E-24 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17725 92f6687004424f631bde07e12000c111 932 Gene3D G3DSA:3.40.50.300 150 262 5.6E-7 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17725 92f6687004424f631bde07e12000c111 932 Gene3D G3DSA:1.25.40.10 602 791 1.3E-5 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS17725 92f6687004424f631bde07e12000c111 932 Gene3D G3DSA:1.25.40.10 855 910 1.3E-5 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS17725 92f6687004424f631bde07e12000c111 932 Pfam PF13401 AAA domain 150 240 7.6E-7 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS17725 92f6687004424f631bde07e12000c111 932 PRINTS PR00364 Disease resistance protein signature 327 341 3.9E-7 T 13-09-2016 PMA3_RS17725 92f6687004424f631bde07e12000c111 932 PRINTS PR00364 Disease resistance protein signature 221 235 3.9E-7 T 13-09-2016 PMA3_RS17725 92f6687004424f631bde07e12000c111 932 PRINTS PR00364 Disease resistance protein signature 153 168 3.9E-7 T 13-09-2016 PMA3_RS17725 92f6687004424f631bde07e12000c111 932 Gene3D G3DSA:1.10.10.10 6 105 8.2E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17725 92f6687004424f631bde07e12000c111 932 SUPERFAMILY SSF46894 9 103 1.08E-18 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS17725 92f6687004424f631bde07e12000c111 932 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 102 4.1E-17 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS17725 92f6687004424f631bde07e12000c111 932 PANTHER PTHR26402:SF606 4 117 1.2E-21 T 13-09-2016 PMA3_RS17725 92f6687004424f631bde07e12000c111 932 PANTHER PTHR26402 4 117 1.2E-21 T 13-09-2016 PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 SUPERFAMILY SSF50249 142 239 3.15E-18 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 PANTHER PTHR23355:SF9 8 824 1.3E-269 T 13-09-2016 PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 Pfam PF00575 S1 RNA binding domain 663 747 7.7E-12 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 SUPERFAMILY SSF50249 71 151 7.81E-17 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 SMART SM00955 264 604 2.3E-182 T 13-09-2016 PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 748 4.9E-262 T 13-09-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 Hamap MF_01895 Ribonuclease R [rnr]. 42 748 56.635 T 13-09-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 ProSitePatterns PS01175 Ribonuclease II family signature. 571 595 - T 13-09-2016 IPR022966 Ribonuclease II/R, conserved site PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 Pfam PF00773 RNB domain 264 602 2.5E-107 T 13-09-2016 PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 PANTHER PTHR23355 8 824 1.3E-269 T 13-09-2016 PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 Gene3D G3DSA:2.40.50.140 667 750 3.0E-20 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 SMART SM00357 90 149 7.0E-9 T 13-09-2016 IPR011129 Cold shock protein GO:0003676 PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 Pfam PF08461 Ribonuclease R winged-helix domain 27 81 6.0E-7 T 13-09-2016 IPR013668 Ribonuclease R winged-helix domain PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 Pfam PF08206 Ribonuclease B OB domain 91 148 4.8E-20 T 13-09-2016 IPR013223 Ribonuclease B, N-terminal OB domain PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 SUPERFAMILY SSF50249 224 665 5.65E-146 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 78 747 7.4E-226 T 13-09-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 SUPERFAMILY SSF50249 667 747 1.3E-21 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS02115 941279847ce40d909c7eff44583fd99f 881 SMART SM00316 665 748 4.2E-13 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS04130 0580b688ea5e727d02cee51733d09826 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 13-09-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS04130 0580b688ea5e727d02cee51733d09826 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.203 T 13-09-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS04130 0580b688ea5e727d02cee51733d09826 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 2.5E-5 T 13-09-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS04130 0580b688ea5e727d02cee51733d09826 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 13-09-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS04130 0580b688ea5e727d02cee51733d09826 360 PANTHER PTHR22926:SF5 2 360 1.5E-178 T 13-09-2016 PMA3_RS04130 0580b688ea5e727d02cee51733d09826 360 PANTHER PTHR22926 2 360 1.5E-178 T 13-09-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS04130 0580b688ea5e727d02cee51733d09826 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 6.4E-137 T 13-09-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS04130 0580b688ea5e727d02cee51733d09826 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.9E-34 T 13-09-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS28595 925c6a98d024e29c0554ad400fe83751 117 PANTHER PTHR11019 3 111 6.8E-44 T 13-09-2016 PMA3_RS28595 925c6a98d024e29c0554ad400fe83751 117 SMART SM00342 21 103 3.2E-29 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS28595 925c6a98d024e29c0554ad400fe83751 117 Gene3D G3DSA:1.10.10.60 3 58 1.2E-20 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28595 925c6a98d024e29c0554ad400fe83751 117 SUPERFAMILY SSF46689 58 108 4.48E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28595 925c6a98d024e29c0554ad400fe83751 117 SUPERFAMILY SSF46689 4 55 3.72E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28595 925c6a98d024e29c0554ad400fe83751 117 Gene3D G3DSA:1.10.10.60 59 105 1.3E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28595 925c6a98d024e29c0554ad400fe83751 117 PANTHER PTHR11019:SF105 3 111 6.8E-44 T 13-09-2016 PMA3_RS28595 925c6a98d024e29c0554ad400fe83751 117 Pfam PF12833 Helix-turn-helix domain 27 104 1.2E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18995 bb71e88b01700b244874a21294ae7e4a 238 Pfam PF03737 Demethylmenaquinone methyltransferase 33 179 7.7E-39 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS18995 bb71e88b01700b244874a21294ae7e4a 238 Gene3D G3DSA:3.50.30.40 29 185 3.8E-47 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS18995 bb71e88b01700b244874a21294ae7e4a 238 PANTHER PTHR33254:SF5 3 234 1.2E-76 T 13-09-2016 PMA3_RS18995 bb71e88b01700b244874a21294ae7e4a 238 SUPERFAMILY SSF89562 28 190 3.53E-46 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS18995 bb71e88b01700b244874a21294ae7e4a 238 PANTHER PTHR33254 3 234 1.2E-76 T 13-09-2016 PMA3_RS18995 bb71e88b01700b244874a21294ae7e4a 238 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 9 229 1.5E-102 T 13-09-2016 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 SUPERFAMILY SSF90123 15 318 2.49E-43 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 PANTHER PTHR24222:SF0 11 557 1.6E-246 T 13-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 Pfam PF00005 ABC transporter 349 495 1.5E-26 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 Gene3D G3DSA:1.20.1560.10 16 318 5.2E-40 T 13-09-2016 PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 PANTHER PTHR24222 11 557 1.6E-246 T 13-09-2016 PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 16 557 3.2E-224 T 13-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 Gene3D G3DSA:3.40.50.300 330 555 2.9E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 SUPERFAMILY SSF52540 323 555 3.95E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 SMART SM00382 357 543 2.7E-14 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS14405 33e87bab857c67a89cc06f491eb64b54 573 Pfam PF00664 ABC transporter transmembrane region 26 281 5.3E-13 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS07565 e9bea63b19607ab1fa96d2cdb54e4d14 474 PANTHER PTHR10422 7 468 0.0 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07565 e9bea63b19607ab1fa96d2cdb54e4d14 474 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 203 258 - T 13-09-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07565 e9bea63b19607ab1fa96d2cdb54e4d14 474 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 12 443 3.0E-112 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07565 e9bea63b19607ab1fa96d2cdb54e4d14 474 SUPERFAMILY SSF81442 8 467 3.53E-125 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07565 e9bea63b19607ab1fa96d2cdb54e4d14 474 PANTHER PTHR10422:SF21 7 468 0.0 T 13-09-2016 PMA3_RS07565 e9bea63b19607ab1fa96d2cdb54e4d14 474 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 8 471 6.0E-231 T 13-09-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07565 e9bea63b19607ab1fa96d2cdb54e4d14 474 Gene3D G3DSA:1.20.210.10 5 467 2.8E-71 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS01580 35675ed3238ccea2627a163b19ec8242 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 219 48.651 T 13-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PMA3_RS01580 35675ed3238ccea2627a163b19ec8242 231 PANTHER PTHR11587:SF3 3 213 1.8E-96 T 13-09-2016 PMA3_RS01580 35675ed3238ccea2627a163b19ec8242 231 SUPERFAMILY SSF52402 3 213 3.31E-65 T 13-09-2016 PMA3_RS01580 35675ed3238ccea2627a163b19ec8242 231 PIRSF PIRSF006293 1 224 4.4E-81 T 13-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PMA3_RS01580 35675ed3238ccea2627a163b19ec8242 231 PANTHER PTHR11587 3 213 1.8E-96 T 13-09-2016 PMA3_RS01580 35675ed3238ccea2627a163b19ec8242 231 Gene3D G3DSA:3.40.50.620 2 214 2.6E-81 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS01580 35675ed3238ccea2627a163b19ec8242 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 207 5.0E-81 T 13-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PMA3_RS01580 35675ed3238ccea2627a163b19ec8242 231 Pfam PF06508 Queuosine biosynthesis protein QueC 4 214 2.0E-82 T 13-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 Pfam PF01546 Peptidase family M20/M25/M40 170 570 2.5E-18 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 SUPERFAMILY SSF53187 492 573 8.86E-44 T 13-09-2016 PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 SUPERFAMILY SSF53187 102 279 8.86E-44 T 13-09-2016 PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 Gene3D G3DSA:3.40.630.10 516 575 6.2E-47 T 13-09-2016 PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 Gene3D G3DSA:3.40.630.10 103 285 6.2E-47 T 13-09-2016 PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 Gene3D G3DSA:3.30.70.360 383 475 3.3E-25 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 Gene3D G3DSA:3.30.70.360 299 382 6.0E-21 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 107 568 2.5E-67 T 13-09-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 PANTHER PTHR11014 358 578 6.2E-38 T 13-09-2016 PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 PANTHER PTHR11014 106 283 6.2E-38 T 13-09-2016 PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 168 177 - T 13-09-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 SUPERFAMILY SSF55031 279 476 1.1E-38 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS12705 f429d16de45098df75fea691cea87b3d 579 Pfam PF07687 Peptidase dimerisation domain 358 392 1.1E-4 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS05120 4cfa9a903bcbd8080f761643ae18788d 517 TIGRFAM TIGR00901 2A0125: AmpG-like permease 29 455 7.1E-127 T 13-09-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 PMA3_RS05120 4cfa9a903bcbd8080f761643ae18788d 517 SUPERFAMILY SSF103473 2 225 4.45E-32 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS05120 4cfa9a903bcbd8080f761643ae18788d 517 SUPERFAMILY SSF103473 299 499 4.45E-32 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS05120 4cfa9a903bcbd8080f761643ae18788d 517 PANTHER PTHR12778 16 215 2.0E-86 T 13-09-2016 PMA3_RS05120 4cfa9a903bcbd8080f761643ae18788d 517 PANTHER PTHR12778 300 492 2.0E-86 T 13-09-2016 PMA3_RS05120 4cfa9a903bcbd8080f761643ae18788d 517 Pfam PF07690 Major Facilitator Superfamily 21 324 7.9E-10 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS05120 4cfa9a903bcbd8080f761643ae18788d 517 Gene3D G3DSA:1.20.1250.20 16 215 5.0E-16 T 13-09-2016 PMA3_RS05120 4cfa9a903bcbd8080f761643ae18788d 517 Gene3D G3DSA:1.20.1250.20 314 498 6.1E-9 T 13-09-2016 PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 SUPERFAMILY SSF56808 6 225 8.89E-78 T 13-09-2016 IPR023674 Ribosomal protein L1-like PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 2.4E-48 T 13-09-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 PIRSF PIRSF002155 1 227 4.8E-72 T 13-09-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 41.47 T 13-09-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 13-09-2016 IPR023673 Ribosomal protein L1, conserved site PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 Gene3D G3DSA:3.40.50.790 69 159 2.2E-38 T 13-09-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.4E-99 T 13-09-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 PANTHER PTHR23105:SF5 21 225 2.4E-72 T 13-09-2016 PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 PANTHER PTHR23105 21 225 2.4E-72 T 13-09-2016 PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 Gene3D G3DSA:3.30.190.20 161 225 1.1E-41 T 13-09-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 PMA3_RS27315 c34f860fffe6be8a4bd2ace02381407e 231 Gene3D G3DSA:3.30.190.20 18 68 1.1E-41 T 13-09-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 PANTHER PTHR11835 190 257 4.2E-235 T 13-09-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 PANTHER PTHR11835 277 418 4.2E-235 T 13-09-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 Gene3D G3DSA:3.40.718.10 14 418 3.2E-160 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 SMART SM01329 30 414 9.2E-175 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 PANTHER PTHR11835 3 166 4.2E-235 T 13-09-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 PANTHER PTHR11835:SF52 190 257 4.2E-235 T 13-09-2016 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 PANTHER PTHR11835:SF52 277 418 4.2E-235 T 13-09-2016 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 413 2.2E-113 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 305 324 - T 13-09-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 SUPERFAMILY SSF53659 6 418 1.34E-144 T 13-09-2016 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 418 2.0E-218 T 13-09-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PMA3_RS19615 3a65ed446a4b1cc6c0b666a1039c072e 418 PANTHER PTHR11835:SF52 3 166 4.2E-235 T 13-09-2016 PMA3_RS08475 041654127bf4e04e6de4fe7d5d083ac7 352 Pfam PF08666 SAF domain 294 339 1.1E-5 T 13-09-2016 IPR013974 SAF domain PMA3_RS08475 041654127bf4e04e6de4fe7d5d083ac7 352 PANTHER PTHR23416 7 303 3.0E-97 T 13-09-2016 PMA3_RS08475 041654127bf4e04e6de4fe7d5d083ac7 352 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 19 343 3.4E-154 T 13-09-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 PMA3_RS08475 041654127bf4e04e6de4fe7d5d083ac7 352 SUPERFAMILY SSF51569 6 303 1.0E-93 T 13-09-2016 PMA3_RS08475 041654127bf4e04e6de4fe7d5d083ac7 352 Gene3D G3DSA:3.90.1210.10 294 350 3.5E-18 T 13-09-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal PMA3_RS08475 041654127bf4e04e6de4fe7d5d083ac7 352 PANTHER PTHR23416:SF62 7 303 3.0E-97 T 13-09-2016 PMA3_RS08475 041654127bf4e04e6de4fe7d5d083ac7 352 Pfam PF03102 NeuB family 40 278 1.6E-90 T 13-09-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 PMA3_RS08475 041654127bf4e04e6de4fe7d5d083ac7 352 Gene3D G3DSA:3.20.20.70 7 277 1.6E-109 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS08475 041654127bf4e04e6de4fe7d5d083ac7 352 SUPERFAMILY SSF51269 290 348 2.35E-15 T 13-09-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal PMA3_RS22810 78a688d7c1150fb4a129c3376a8e84b4 193 PANTHER PTHR11019:SF112 4 94 2.6E-53 T 13-09-2016 PMA3_RS22810 78a688d7c1150fb4a129c3376a8e84b4 193 PANTHER PTHR11019:SF112 112 145 2.6E-53 T 13-09-2016 PMA3_RS22810 78a688d7c1150fb4a129c3376a8e84b4 193 Gene3D G3DSA:3.40.50.880 3 186 1.1E-54 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS22810 78a688d7c1150fb4a129c3376a8e84b4 193 SUPERFAMILY SSF52317 4 188 1.86E-51 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS22810 78a688d7c1150fb4a129c3376a8e84b4 193 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 187 1.1E-50 T 13-09-2016 IPR006286 Peptidase C56, PfpI GO:0016798 PMA3_RS22810 78a688d7c1150fb4a129c3376a8e84b4 193 Pfam PF01965 DJ-1/PfpI family 4 181 2.2E-46 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS22810 78a688d7c1150fb4a129c3376a8e84b4 193 PANTHER PTHR11019 4 94 2.6E-53 T 13-09-2016 PMA3_RS22810 78a688d7c1150fb4a129c3376a8e84b4 193 PANTHER PTHR11019 112 145 2.6E-53 T 13-09-2016 PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 SUPERFAMILY SSF54292 7 85 3.93E-24 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 Gene3D G3DSA:2.40.30.10 93 180 3.3E-17 T 13-09-2016 PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 Pfam PF00970 Oxidoreductase FAD-binding domain 99 175 3.2E-6 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 SUPERFAMILY SSF52343 189 308 1.06E-19 T 13-09-2016 PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 PANTHER PTHR19370 29 308 1.4E-48 T 13-09-2016 PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 76 4.0E-14 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 Pfam PF00175 Oxidoreductase NAD-binding domain 196 256 2.2E-5 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 PANTHER PTHR19370:SF68 29 308 1.4E-48 T 13-09-2016 PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 SUPERFAMILY SSF63380 93 180 1.09E-15 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 Gene3D G3DSA:3.40.50.80 190 309 1.0E-16 T 13-09-2016 PMA3_RS23460 b18e632dc7e381ee44a25d27a981c235 311 Gene3D G3DSA:3.10.20.30 9 86 8.6E-24 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS15485 ded7d1b1aa0470677f9d02292767ebcd 162 SUPERFAMILY SSF51316 1 135 9.31E-29 T 13-09-2016 IPR011057 Mss4-like PMA3_RS15485 ded7d1b1aa0470677f9d02292767ebcd 162 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 119 9.3E-8 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS15485 ded7d1b1aa0470677f9d02292767ebcd 162 PANTHER PTHR33337 1 157 1.0E-12 T 13-09-2016 PMA3_RS15485 ded7d1b1aa0470677f9d02292767ebcd 162 Gene3D G3DSA:3.90.1590.10 1 159 1.2E-28 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS07955 2d7dbe832d71fc6e49b0dce6f8bba6bc 155 Gene3D G3DSA:3.40.630.30 13 152 8.6E-21 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS07955 2d7dbe832d71fc6e49b0dce6f8bba6bc 155 PANTHER PTHR23091:SF122 50 154 7.1E-15 T 13-09-2016 PMA3_RS07955 2d7dbe832d71fc6e49b0dce6f8bba6bc 155 PANTHER PTHR23091 50 154 7.1E-15 T 13-09-2016 PMA3_RS07955 2d7dbe832d71fc6e49b0dce6f8bba6bc 155 Pfam PF00583 Acetyltransferase (GNAT) family 60 133 1.2E-9 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS07955 2d7dbe832d71fc6e49b0dce6f8bba6bc 155 SUPERFAMILY SSF55729 13 138 2.13E-21 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 SUPERFAMILY SSF48029 119 330 2.75E-68 T 13-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 SUPERFAMILY SSF48029 10 122 6.67E-25 T 13-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 PIRSF PIRSF003161 4 338 3.2E-119 T 13-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 Gene3D G3DSA:1.10.220.30 79 199 4.6E-29 T 13-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 Gene3D G3DSA:1.10.220.30 200 338 2.9E-43 T 13-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 Pfam PF14842 FliG N-terminal domain 9 109 2.3E-34 T 13-09-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 6 336 1.1E-103 T 13-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 PANTHER PTHR30534:SF0 1 338 1.6E-112 T 13-09-2016 PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 4.4E-64 T 13-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 4.4E-64 T 13-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 4.4E-64 T 13-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 4.4E-64 T 13-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 4.4E-64 T 13-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 4.4E-64 T 13-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 4.4E-64 T 13-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 Pfam PF14841 FliG middle domain 120 193 1.8E-23 T 13-09-2016 IPR032779 Flagellar motor switch protein FliG, middle domain PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 Gene3D G3DSA:1.10.220.30 13 78 1.3E-16 T 13-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 Pfam PF01706 FliG C-terminal domain 223 329 1.3E-41 T 13-09-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal PMA3_RS21725 bc91360eb9795e7e9d503aba2728eedf 338 PANTHER PTHR30534 1 338 1.6E-112 T 13-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 SUPERFAMILY SSF52540 92 307 5.55E-29 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 PANTHER PTHR10799:SF576 509 747 1.4E-48 T 13-09-2016 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 PANTHER PTHR10799:SF576 119 209 1.4E-48 T 13-09-2016 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 SMART SM00490 550 629 3.5E-17 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 SUPERFAMILY SSF52540 509 679 1.45E-45 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 SUPERFAMILY SSF52540 240 295 1.45E-45 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 Gene3D G3DSA:3.40.50.300 99 291 3.2E-13 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 PANTHER PTHR10799 509 747 1.4E-48 T 13-09-2016 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 SMART SM00487 97 310 6.2E-17 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 PANTHER PTHR10799:SF576 369 490 1.4E-48 T 13-09-2016 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 Gene3D G3DSA:3.40.50.300 513 641 3.5E-26 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 Pfam PF00176 SNF2 family N-terminal domain 115 423 6.4E-16 T 13-09-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 PANTHER PTHR10799 232 319 1.4E-48 T 13-09-2016 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 PANTHER PTHR10799 926 1022 1.4E-48 T 13-09-2016 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 PANTHER PTHR10799 119 209 1.4E-48 T 13-09-2016 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 PANTHER PTHR10799:SF576 232 319 1.4E-48 T 13-09-2016 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 PANTHER PTHR10799:SF576 926 1022 1.4E-48 T 13-09-2016 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 PANTHER PTHR10799 369 490 1.4E-48 T 13-09-2016 PMA3_RS26420 521449362431e0a3139076ad1ee8cffa 1040 Pfam PF00271 Helicase conserved C-terminal domain 522 629 1.7E-17 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS30045 4d732dd00fa10f172c78b3ece24ae884 290 SUPERFAMILY SSF110849 37 184 4.13E-36 T 13-09-2016 IPR003115 ParB/Sulfiredoxin PMA3_RS30045 4d732dd00fa10f172c78b3ece24ae884 290 Gene3D G3DSA:3.90.1530.10 28 131 1.3E-43 T 13-09-2016 PMA3_RS30045 4d732dd00fa10f172c78b3ece24ae884 290 PANTHER PTHR33375 1 290 1.2E-103 T 13-09-2016 PMA3_RS30045 4d732dd00fa10f172c78b3ece24ae884 290 SMART SM00470 37 127 3.3E-38 T 13-09-2016 IPR003115 ParB/Sulfiredoxin PMA3_RS30045 4d732dd00fa10f172c78b3ece24ae884 290 Gene3D G3DSA:1.10.260.40 132 177 1.8E-4 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS30045 4d732dd00fa10f172c78b3ece24ae884 290 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 204 2.1E-61 T 13-09-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 PMA3_RS30045 4d732dd00fa10f172c78b3ece24ae884 290 Pfam PF02195 ParB-like nuclease domain 39 127 3.3E-29 T 13-09-2016 IPR003115 ParB/Sulfiredoxin PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 TIGRFAM TIGR01228 hutU: urocanate hydratase 13 556 0.0 T 13-09-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 PIRSF PIRSF001423 2 560 6.6E-297 T 13-09-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 Hamap MF_00577 Urocanate hydratase [hutU]. 3 558 50.519 T 13-09-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 SUPERFAMILY SSF111326 10 557 3.66E-263 T 13-09-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 13-09-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 PANTHER PTHR12216 11 557 0.0 T 13-09-2016 PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 PANTHER PTHR12216:SF3 11 557 0.0 T 13-09-2016 PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 Gene3D G3DSA:3.40.1770.10 362 557 3.4E-164 T 13-09-2016 PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 Gene3D G3DSA:3.40.1770.10 10 143 3.4E-164 T 13-09-2016 PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 Gene3D G3DSA:3.40.50.10730 144 351 1.4E-96 T 13-09-2016 PMA3_RS01265 c87e01b4b336d1bf126d623278351786 560 Pfam PF01175 Urocanase 14 549 1.6E-262 T 13-09-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS14725 5c156086319696e8a000d76de513ddd7 430 PANTHER PTHR13847:SF210 2 427 2.9E-139 T 13-09-2016 PMA3_RS14725 5c156086319696e8a000d76de513ddd7 430 PANTHER PTHR13847 2 427 2.9E-139 T 13-09-2016 PMA3_RS14725 5c156086319696e8a000d76de513ddd7 430 Gene3D G3DSA:3.50.50.60 15 119 9.6E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14725 5c156086319696e8a000d76de513ddd7 430 Gene3D G3DSA:3.50.50.60 346 392 9.6E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14725 5c156086319696e8a000d76de513ddd7 430 Gene3D G3DSA:3.50.50.60 174 253 9.6E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14725 5c156086319696e8a000d76de513ddd7 430 Pfam PF01266 FAD dependent oxidoreductase 30 384 6.6E-50 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS14725 5c156086319696e8a000d76de513ddd7 430 SUPERFAMILY SSF51905 346 422 7.77E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14725 5c156086319696e8a000d76de513ddd7 430 SUPERFAMILY SSF51905 30 254 7.77E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS23385 24edee32bc29daca0ffb07a0f46d235b 258 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 10 164 9.5E-31 T 13-09-2016 IPR018763 Protein of unknown function DUF2334 PMA3_RS23385 24edee32bc29daca0ffb07a0f46d235b 258 Gene3D G3DSA:3.20.20.370 39 236 5.3E-7 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS23385 24edee32bc29daca0ffb07a0f46d235b 258 SUPERFAMILY SSF88713 31 165 2.09E-9 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS16380 725b96aa22205bcf07937289a0059da2 276 Pfam PF12679 ABC-2 family transporter protein 5 274 6.2E-45 T 13-09-2016 IPR032688 ABC-2 family transporter protein GO:0006810 PMA3_RS16380 725b96aa22205bcf07937289a0059da2 276 PANTHER PTHR30294 1 231 6.6E-72 T 13-09-2016 PMA3_RS16380 725b96aa22205bcf07937289a0059da2 276 PANTHER PTHR30294 247 274 6.6E-72 T 13-09-2016 PMA3_RS16380 725b96aa22205bcf07937289a0059da2 276 PANTHER PTHR30294:SF26 1 231 6.6E-72 T 13-09-2016 PMA3_RS16380 725b96aa22205bcf07937289a0059da2 276 PANTHER PTHR30294:SF26 247 274 6.6E-72 T 13-09-2016 PMA3_RS02390 038c06e1b1dac76b9cc9df481a415be6 101 PANTHER PTHR33569 1 101 2.1E-64 T 13-09-2016 PMA3_RS02390 038c06e1b1dac76b9cc9df481a415be6 101 Gene3D G3DSA:2.10.150.10 1 100 4.6E-50 T 13-09-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02390 038c06e1b1dac76b9cc9df481a415be6 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.671 T 13-09-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02390 038c06e1b1dac76b9cc9df481a415be6 101 SUPERFAMILY SSF51278 1 101 6.93E-48 T 13-09-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02390 038c06e1b1dac76b9cc9df481a415be6 101 PANTHER PTHR33569:SF1 1 101 2.1E-64 T 13-09-2016 PMA3_RS02390 038c06e1b1dac76b9cc9df481a415be6 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 7.4E-47 T 13-09-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02390 038c06e1b1dac76b9cc9df481a415be6 101 Pfam PF00699 Urease beta subunit 3 99 9.2E-46 T 13-09-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS26355 e871b81be8716b61c0f228ccef7e8784 250 Gene3D G3DSA:3.40.50.880 5 246 2.7E-44 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS26355 e871b81be8716b61c0f228ccef7e8784 250 SUPERFAMILY SSF52317 27 246 6.27E-39 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS26355 e871b81be8716b61c0f228ccef7e8784 250 Pfam PF07722 Peptidase C26 5 223 1.3E-71 T 13-09-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 PMA3_RS26355 e871b81be8716b61c0f228ccef7e8784 250 PANTHER PTHR11922 21 69 1.4E-50 T 13-09-2016 PMA3_RS26355 e871b81be8716b61c0f228ccef7e8784 250 PANTHER PTHR11922 85 246 1.4E-50 T 13-09-2016 PMA3_RS26355 e871b81be8716b61c0f228ccef7e8784 250 PANTHER PTHR11922:SF18 21 69 1.4E-50 T 13-09-2016 PMA3_RS26355 e871b81be8716b61c0f228ccef7e8784 250 PANTHER PTHR11922:SF18 85 246 1.4E-50 T 13-09-2016 PMA3_RS08725 f0401e6036eb219f7d31827e5c61b8da 173 Gene3D G3DSA:2.60.40.420 30 171 3.9E-44 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS08725 f0401e6036eb219f7d31827e5c61b8da 173 SUPERFAMILY SSF49503 39 172 2.53E-29 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS08725 f0401e6036eb219f7d31827e5c61b8da 173 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 42 171 3.4E-10 T 13-09-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 PMA3_RS21060 4cb2fdb109b0cf6a8b32bea1e8f6ef5b 442 PANTHER PTHR32024 1 442 1.1E-154 T 13-09-2016 PMA3_RS21060 4cb2fdb109b0cf6a8b32bea1e8f6ef5b 442 Pfam PF02386 Cation transport protein 34 420 3.2E-57 T 13-09-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PMA3_RS21060 4cb2fdb109b0cf6a8b32bea1e8f6ef5b 442 PANTHER PTHR32024:SF1 1 442 1.1E-154 T 13-09-2016 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 Pfam PF07690 Major Facilitator Superfamily 21 413 2.5E-55 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 5.5E-9 T 13-09-2016 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 5.5E-9 T 13-09-2016 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 5.5E-9 T 13-09-2016 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 206 224 5.5E-9 T 13-09-2016 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 404 423 5.5E-9 T 13-09-2016 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 SUPERFAMILY SSF103473 469 496 1.12E-69 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 SUPERFAMILY SSF103473 9 199 1.12E-69 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 SUPERFAMILY SSF103473 252 423 1.12E-69 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 PANTHER PTHR23501:SF73 14 503 1.6E-159 T 13-09-2016 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 421 3.4E-76 T 13-09-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 PANTHER PTHR23501 14 503 1.6E-159 T 13-09-2016 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 Gene3D G3DSA:1.20.1250.20 17 189 1.9E-32 T 13-09-2016 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 Gene3D G3DSA:1.20.1250.20 268 430 9.5E-16 T 13-09-2016 PMA3_RS23565 0094929e0de26184d334de324a3d115d 505 Gene3D G3DSA:1.20.1250.20 470 495 9.5E-16 T 13-09-2016 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 Gene3D G3DSA:3.40.50.1370 19 162 1.2E-49 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 Gene3D G3DSA:3.40.50.1370 163 298 5.5E-48 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 5.9E-19 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 5.9E-19 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 151 162 5.9E-19 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 5.9E-19 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PANTHER PTHR11405 1 329 5.0E-131 T 13-09-2016 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 19 163 1.9E-37 T 13-09-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 171 316 1.0E-23 T 13-09-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 2.8E-31 T 13-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 93 102 2.8E-31 T 13-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 2.8E-31 T 13-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 150 167 2.8E-31 T 13-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 2.8E-31 T 13-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 2.8E-31 T 13-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 18 321 41.464 T 13-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 19 319 8.8E-90 T 13-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 SUPERFAMILY SSF53671 18 321 9.43E-95 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS28450 518ce864d5a23c091b6a19cfc3f771f4 334 PANTHER PTHR11405:SF16 1 329 5.0E-131 T 13-09-2016 PMA3_RS14100 940b300b7cfab3137ee4b33a3ea2c5db 475 PANTHER PTHR11785 7 469 1.5E-238 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS14100 940b300b7cfab3137ee4b33a3ea2c5db 475 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 7 474 6.1E-222 T 13-09-2016 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 PMA3_RS14100 940b300b7cfab3137ee4b33a3ea2c5db 475 Pfam PF13520 Amino acid permease 10 447 5.3E-75 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS14100 940b300b7cfab3137ee4b33a3ea2c5db 475 PIRSF PIRSF006060 1 471 2.4E-49 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS14100 940b300b7cfab3137ee4b33a3ea2c5db 475 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 2 475 3.4E-198 T 13-09-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 PMA3_RS14100 940b300b7cfab3137ee4b33a3ea2c5db 475 PANTHER PTHR11785:SF77 7 469 1.5E-238 T 13-09-2016 PMA3_RS05930 9eea1e80e8131550ecb0a16a71e91593 240 SUPERFAMILY SSF52172 8 192 9.39E-40 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS05930 9eea1e80e8131550ecb0a16a71e91593 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 233 3.0E-18 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS05930 9eea1e80e8131550ecb0a16a71e91593 240 PANTHER PTHR26402 9 240 5.8E-101 T 13-09-2016 PMA3_RS05930 9eea1e80e8131550ecb0a16a71e91593 240 Gene3D G3DSA:3.40.50.2300 9 130 6.9E-38 T 13-09-2016 PMA3_RS05930 9eea1e80e8131550ecb0a16a71e91593 240 Gene3D G3DSA:1.10.10.10 142 234 2.0E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05930 9eea1e80e8131550ecb0a16a71e91593 240 Pfam PF00072 Response regulator receiver domain 11 119 6.5E-25 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05930 9eea1e80e8131550ecb0a16a71e91593 240 PANTHER PTHR26402:SF545 9 240 5.8E-101 T 13-09-2016 PMA3_RS05930 9eea1e80e8131550ecb0a16a71e91593 240 SMART SM00448 9 119 6.6E-39 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05930 9eea1e80e8131550ecb0a16a71e91593 240 SMART SM00862 156 233 8.1E-18 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS08215 42adbebadd09718d72d7f05c9c0706ec 441 SUPERFAMILY SSF103473 7 413 6.67E-57 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS08215 42adbebadd09718d72d7f05c9c0706ec 441 PANTHER PTHR11662:SF141 1 419 7.6E-134 T 13-09-2016 PMA3_RS08215 42adbebadd09718d72d7f05c9c0706ec 441 Gene3D G3DSA:1.20.1250.20 226 419 1.9E-30 T 13-09-2016 PMA3_RS08215 42adbebadd09718d72d7f05c9c0706ec 441 PIRSF PIRSF002808 2 426 5.9E-78 T 13-09-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS08215 42adbebadd09718d72d7f05c9c0706ec 441 Gene3D G3DSA:1.20.1250.20 9 206 5.2E-40 T 13-09-2016 PMA3_RS08215 42adbebadd09718d72d7f05c9c0706ec 441 PANTHER PTHR11662 1 419 7.6E-134 T 13-09-2016 PMA3_RS08215 42adbebadd09718d72d7f05c9c0706ec 441 Pfam PF07690 Major Facilitator Superfamily 20 384 7.0E-39 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS21465 10e983857f1d396281d0253c8779afab 337 PANTHER PTHR30043 23 136 1.5E-122 T 13-09-2016 PMA3_RS21465 10e983857f1d396281d0253c8779afab 337 PANTHER PTHR30043 170 319 1.5E-122 T 13-09-2016 PMA3_RS21465 10e983857f1d396281d0253c8779afab 337 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 277 3.2E-67 T 13-09-2016 PMA3_RS21465 10e983857f1d396281d0253c8779afab 337 SUPERFAMILY SSF53850 51 242 2.44E-35 T 13-09-2016 PMA3_RS21465 10e983857f1d396281d0253c8779afab 337 PANTHER PTHR30043:SF4 23 136 1.5E-122 T 13-09-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 PMA3_RS21465 10e983857f1d396281d0253c8779afab 337 PANTHER PTHR30043:SF4 170 319 1.5E-122 T 13-09-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 PMA3_RS21465 10e983857f1d396281d0253c8779afab 337 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 12 288 4.9E-93 T 13-09-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 PMA3_RS21465 10e983857f1d396281d0253c8779afab 337 Gene3D G3DSA:3.40.190.10 116 200 1.0E-7 T 13-09-2016 PMA3_RS21465 10e983857f1d396281d0253c8779afab 337 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 10 251 1.6E-76 T 13-09-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 PMA3_RS20890 fb39d2cff4106a5ea749d70e9fe4cc89 375 SUPERFAMILY SSF53383 14 371 5.04E-101 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS20890 fb39d2cff4106a5ea749d70e9fe4cc89 375 Gene3D G3DSA:3.40.640.10 13 247 7.7E-75 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS20890 fb39d2cff4106a5ea749d70e9fe4cc89 375 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 366 7.3E-116 T 13-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PMA3_RS20890 fb39d2cff4106a5ea749d70e9fe4cc89 375 PANTHER PTHR30244 1 374 1.0E-127 T 13-09-2016 PMA3_RS20890 fb39d2cff4106a5ea749d70e9fe4cc89 375 PANTHER PTHR30244:SF13 1 374 1.0E-127 T 13-09-2016 PMA3_RS20890 fb39d2cff4106a5ea749d70e9fe4cc89 375 PIRSF PIRSF000390 3 374 9.0E-99 T 13-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PMA3_RS20890 fb39d2cff4106a5ea749d70e9fe4cc89 375 Gene3D G3DSA:3.90.1150.10 249 372 2.2E-34 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS15085 b4f66f2297a8dd7c38d9736cd26912fb 330 PANTHER PTHR22550 1 305 1.4E-97 T 13-09-2016 PMA3_RS15085 b4f66f2297a8dd7c38d9736cd26912fb 330 Gene3D G3DSA:3.40.50.410 90 278 1.4E-24 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15085 b4f66f2297a8dd7c38d9736cd26912fb 330 PANTHER PTHR22550:SF12 1 305 1.4E-97 T 13-09-2016 PMA3_RS15085 b4f66f2297a8dd7c38d9736cd26912fb 330 Pfam PF00092 von Willebrand factor type A domain 93 274 2.1E-23 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15085 b4f66f2297a8dd7c38d9736cd26912fb 330 SUPERFAMILY SSF53300 89 278 2.82E-35 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15085 b4f66f2297a8dd7c38d9736cd26912fb 330 SMART SM00327 91 278 5.6E-16 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 1.2E-25 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.2E-25 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 1.2E-25 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 1.2E-25 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 299 1.7E-113 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 3.0E-27 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 3.0E-27 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 3.0E-27 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 3.0E-27 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 3.0E-27 T 13-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 Gene3D G3DSA:3.40.50.1370 141 286 8.6E-58 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 SUPERFAMILY SSF53671 3 300 3.54E-102 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 9.7E-45 T 13-09-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PANTHER PTHR11405 1 298 2.9E-139 T 13-09-2016 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 PANTHER PTHR11405:SF1 1 298 2.9E-139 T 13-09-2016 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 Gene3D G3DSA:3.40.50.1370 2 140 3.6E-51 T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 297 2.4E-51 T 13-09-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 13-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PMA3_RS23800 bfb0934f83157a8725dc3b344d1c29ed 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 78.837 T 13-09-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 433 2.5E-162 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 SUPERFAMILY SSF53720 30 434 6.87E-88 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 434 41.136 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 PANTHER PTHR21256 6 440 9.2E-205 T 13-09-2016 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 236 268 - T 13-09-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 PIRSF PIRSF000099 6 437 5.4E-162 T 13-09-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 Pfam PF00815 Histidinol dehydrogenase 30 433 7.4E-170 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 PRINTS PR00083 Histidinol dehydrogenase signature 143 169 7.8E-89 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 PRINTS PR00083 Histidinol dehydrogenase signature 368 386 7.8E-89 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 PRINTS PR00083 Histidinol dehydrogenase signature 236 257 7.8E-89 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 PRINTS PR00083 Histidinol dehydrogenase signature 327 352 7.8E-89 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 PRINTS PR00083 Histidinol dehydrogenase signature 177 203 7.8E-89 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 PRINTS PR00083 Histidinol dehydrogenase signature 258 277 7.8E-89 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 7.8E-89 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 PRINTS PR00083 Histidinol dehydrogenase signature 207 232 7.8E-89 T 13-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PMA3_RS25035 7139901cd9bc53a645f837c503b3744f 445 Gene3D G3DSA:3.40.50.1980 33 246 1.9E-80 T 13-09-2016 PMA3_RS26415 49aa490ae4056d843239a2a2fe22432b 428 PANTHER PTHR30563 53 428 1.9E-89 T 13-09-2016 PMA3_RS26415 49aa490ae4056d843239a2a2fe22432b 428 Pfam PF02646 RmuC family 100 394 4.4E-93 T 13-09-2016 IPR003798 DNA recombination RmuC PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PRINTS PR00691 Adhesin B signature 33 54 9.5E-12 T 13-09-2016 IPR006129 Adhesin B GO:0007155 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PRINTS PR00691 Adhesin B signature 135 154 9.5E-12 T 13-09-2016 IPR006129 Adhesin B GO:0007155 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PRINTS PR00691 Adhesin B signature 58 76 9.5E-12 T 13-09-2016 IPR006129 Adhesin B GO:0007155 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PRINTS PR00691 Adhesin B signature 77 96 9.5E-12 T 13-09-2016 IPR006129 Adhesin B GO:0007155 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PRINTS PR00691 Adhesin B signature 282 300 9.5E-12 T 13-09-2016 IPR006129 Adhesin B GO:0007155 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PRINTS PR00691 Adhesin B signature 193 210 9.5E-12 T 13-09-2016 IPR006129 Adhesin B GO:0007155 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PANTHER PTHR30477 1 305 4.4E-158 T 13-09-2016 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 Gene3D G3DSA:3.40.50.1980 26 184 6.5E-42 T 13-09-2016 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 39 301 5.2E-56 T 13-09-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PANTHER PTHR30477:SF15 1 305 4.4E-158 T 13-09-2016 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 Gene3D G3DSA:3.40.50.1980 185 304 5.8E-28 T 13-09-2016 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PRINTS PR00690 Adhesin family signature 246 264 1.3E-8 T 13-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PRINTS PR00690 Adhesin family signature 64 77 1.3E-8 T 13-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PRINTS PR00690 Adhesin family signature 77 94 1.3E-8 T 13-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 PRINTS PR00690 Adhesin family signature 193 214 1.3E-8 T 13-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 PMA3_RS07335 822fe8bd080a72ba7187abff203785e6 308 SUPERFAMILY SSF53807 32 304 9.32E-68 T 13-09-2016 PMA3_RS23430 ee071adea66fa1f4ccf9e82b0fc552b4 333 Gene3D G3DSA:1.10.8.300 220 328 3.4E-32 T 13-09-2016 PMA3_RS23430 ee071adea66fa1f4ccf9e82b0fc552b4 333 SMART SM00382 51 192 2.6E-5 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS23430 ee071adea66fa1f4ccf9e82b0fc552b4 333 PANTHER PTHR11603 4 332 3.2E-180 T 13-09-2016 PMA3_RS23430 ee071adea66fa1f4ccf9e82b0fc552b4 333 SUPERFAMILY SSF52540 23 305 3.95E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23430 ee071adea66fa1f4ccf9e82b0fc552b4 333 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 54 184 2.3E-64 T 13-09-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PMA3_RS23430 ee071adea66fa1f4ccf9e82b0fc552b4 333 Gene3D G3DSA:3.40.50.300 35 200 1.5E-45 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23430 ee071adea66fa1f4ccf9e82b0fc552b4 333 PANTHER PTHR11603:SF149 4 332 3.2E-180 T 13-09-2016 PMA3_RS23430 ee071adea66fa1f4ccf9e82b0fc552b4 333 PIRSF PIRSF002849 1 333 4.4E-131 T 13-09-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 125 1.7E-42 T 13-09-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 13-09-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 SUPERFAMILY SSF55347 127 236 8.72E-38 T 13-09-2016 PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 Gene3D G3DSA:3.40.50.720 2 163 7.5E-60 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 PANTHER PTHR20836 3 266 5.8E-101 T 13-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 9.5E-44 T 13-09-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 PIRSF PIRSF000161 1 267 3.1E-90 T 13-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 SUPERFAMILY SSF51735 236 266 2.32E-52 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 SUPERFAMILY SSF51735 1 126 2.32E-52 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 36.119 T 13-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 265 8.4E-102 T 13-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS25570 b003e525496c67e2d557fa60c59d9a6d 267 PANTHER PTHR20836:SF0 3 266 5.8E-101 T 13-09-2016 PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 PANTHER PTHR30126:SF6 1 309 2.7E-209 T 13-09-2016 PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.2E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.2E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.2E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 Pfam PF03466 LysR substrate binding domain 89 264 1.2E-40 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 PANTHER PTHR30126 1 309 2.7E-209 T 13-09-2016 PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 Gene3D G3DSA:3.40.190.10 90 183 2.0E-22 T 13-09-2016 PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 SUPERFAMILY SSF46785 1 113 4.63E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 SUPERFAMILY SSF53850 90 321 2.35E-42 T 13-09-2016 PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.9E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 Gene3D G3DSA:3.40.190.10 184 262 1.3E-28 T 13-09-2016 PMA3_RS07670 0f9c525008836a98533bd766a21ab48a 324 Gene3D G3DSA:1.10.10.10 1 82 1.2E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15900 48381c234259c26fdeb704af855f19a8 358 Gene3D G3DSA:3.10.180.10 156 355 2.3E-67 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS15900 48381c234259c26fdeb704af855f19a8 358 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 142 4.8E-69 T 13-09-2016 PMA3_RS15900 48381c234259c26fdeb704af855f19a8 358 PANTHER PTHR11959 6 356 1.3E-111 T 13-09-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 PMA3_RS15900 48381c234259c26fdeb704af855f19a8 358 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 160 277 3.4E-20 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS15900 48381c234259c26fdeb704af855f19a8 358 PIRSF PIRSF009283 1 356 1.0E-115 T 13-09-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 PMA3_RS15900 48381c234259c26fdeb704af855f19a8 358 PANTHER PTHR11959:SF1 6 356 1.3E-111 T 13-09-2016 PMA3_RS15900 48381c234259c26fdeb704af855f19a8 358 Gene3D G3DSA:3.10.180.10 6 146 1.1E-45 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS15900 48381c234259c26fdeb704af855f19a8 358 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 355 6.2E-126 T 13-09-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 PMA3_RS15900 48381c234259c26fdeb704af855f19a8 358 SUPERFAMILY SSF54593 5 342 5.09E-83 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 Gene3D G3DSA:3.90.740.10 203 387 1.5E-52 T 13-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PANTHER PTHR11946:SF11 279 933 0.0 T 13-09-2016 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PANTHER PTHR11946 231 256 0.0 T 13-09-2016 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 Pfam PF08264 Anticodon-binding domain of tRNA 691 847 1.1E-27 T 13-09-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 2.5E-32 T 13-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.5E-32 T 13-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 2.5E-32 T 13-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 235 258 2.5E-32 T 13-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 2.5E-32 T 13-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PANTHER PTHR11946 6 212 0.0 T 13-09-2016 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 Gene3D G3DSA:3.40.50.620 14 197 2.5E-129 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 Gene3D G3DSA:3.40.50.620 404 643 2.5E-129 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 13-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 647 1.9E-241 T 13-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 934 21.085 T 13-09-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 SUPERFAMILY SSF52374 3 199 4.55E-129 T 13-09-2016 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 SUPERFAMILY SSF52374 401 653 4.55E-129 T 13-09-2016 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PANTHER PTHR11946:SF11 6 212 0.0 T 13-09-2016 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PANTHER PTHR11946:SF11 231 256 0.0 T 13-09-2016 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 SUPERFAMILY SSF47323 658 934 4.86E-77 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 SUPERFAMILY SSF50677 202 401 6.49E-52 T 13-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 PANTHER PTHR11946 279 933 0.0 T 13-09-2016 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 849 6.6E-271 T 13-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 Gene3D G3DSA:1.10.730.10 648 795 1.3E-43 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS03215 2ed46cd1148192c063dead536b16b4a4 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 1.2E-5 T 13-09-2016 IPR010663 Zinc finger, FPG/IleRS-type PMA3_RS16750 d127d1e128dc9e96f0736adf7e121891 432 PANTHER PTHR33307 67 342 1.2E-31 T 13-09-2016 PMA3_RS16750 d127d1e128dc9e96f0736adf7e121891 432 Pfam PF13088 BNR repeat-like domain 78 408 1.1E-82 T 13-09-2016 IPR011040 Sialidases PMA3_RS16750 d127d1e128dc9e96f0736adf7e121891 432 Gene3D G3DSA:2.120.10.10 59 339 7.9E-42 T 13-09-2016 IPR011040 Sialidases PMA3_RS16750 d127d1e128dc9e96f0736adf7e121891 432 Gene3D G3DSA:2.120.10.10 392 427 7.9E-42 T 13-09-2016 IPR011040 Sialidases PMA3_RS16750 d127d1e128dc9e96f0736adf7e121891 432 PANTHER PTHR33307:SF3 392 431 1.2E-31 T 13-09-2016 PMA3_RS16750 d127d1e128dc9e96f0736adf7e121891 432 PANTHER PTHR33307 392 431 1.2E-31 T 13-09-2016 PMA3_RS16750 d127d1e128dc9e96f0736adf7e121891 432 SUPERFAMILY SSF50939 64 340 3.92E-38 T 13-09-2016 IPR011040 Sialidases PMA3_RS16750 d127d1e128dc9e96f0736adf7e121891 432 SUPERFAMILY SSF50939 393 428 3.92E-38 T 13-09-2016 IPR011040 Sialidases PMA3_RS16750 d127d1e128dc9e96f0736adf7e121891 432 PANTHER PTHR33307:SF3 67 342 1.2E-31 T 13-09-2016 PMA3_RS02445 c72267afdeff341ee4f13ba9b50a837d 705 Pfam PF00593 TonB dependent receptor 445 703 1.8E-27 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS02445 c72267afdeff341ee4f13ba9b50a837d 705 Gene3D G3DSA:2.40.170.20 170 705 7.3E-76 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS02445 c72267afdeff341ee4f13ba9b50a837d 705 PANTHER PTHR32552 1 705 2.2E-282 T 13-09-2016 PMA3_RS02445 c72267afdeff341ee4f13ba9b50a837d 705 Gene3D G3DSA:2.170.130.10 81 169 1.7E-14 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS02445 c72267afdeff341ee4f13ba9b50a837d 705 PANTHER PTHR32552:SF12 1 705 2.2E-282 T 13-09-2016 PMA3_RS02445 c72267afdeff341ee4f13ba9b50a837d 705 SUPERFAMILY SSF56935 66 705 9.16E-90 T 13-09-2016 PMA3_RS02445 c72267afdeff341ee4f13ba9b50a837d 705 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 70 705 2.4E-294 T 13-09-2016 IPR010100 TonB-dependent copper receptor PMA3_RS02445 c72267afdeff341ee4f13ba9b50a837d 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 169 8.5E-12 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS09670 48812ba77684567182c4e0de28a2c279 242 PANTHER PTHR30133:SF1 16 242 1.2E-122 T 13-09-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 PMA3_RS09670 48812ba77684567182c4e0de28a2c279 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 233 2.0E-22 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09670 48812ba77684567182c4e0de28a2c279 242 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 128 3.6E-21 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS09670 48812ba77684567182c4e0de28a2c279 242 Gene3D G3DSA:1.10.3720.10 21 233 1.9E-44 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09670 48812ba77684567182c4e0de28a2c279 242 PANTHER PTHR30133 16 242 1.2E-122 T 13-09-2016 PMA3_RS09670 48812ba77684567182c4e0de28a2c279 242 SUPERFAMILY SSF161098 21 231 1.31E-41 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS08355 5c7a44718b43a1eb837f6cfb34c9a7b0 132 SMART SM00422 6 73 4.6E-17 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS08355 5c7a44718b43a1eb837f6cfb34c9a7b0 132 Gene3D G3DSA:1.10.1660.10 3 59 9.3E-21 T 13-09-2016 PMA3_RS08355 5c7a44718b43a1eb837f6cfb34c9a7b0 132 PANTHER PTHR30204:SF1 1 132 1.4E-22 T 13-09-2016 PMA3_RS08355 5c7a44718b43a1eb837f6cfb34c9a7b0 132 Pfam PF13411 MerR HTH family regulatory protein 6 71 4.4E-16 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS08355 5c7a44718b43a1eb837f6cfb34c9a7b0 132 SUPERFAMILY SSF46955 6 118 2.97E-24 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS08355 5c7a44718b43a1eb837f6cfb34c9a7b0 132 PANTHER PTHR30204 1 132 1.4E-22 T 13-09-2016 PMA3_RS08355 5c7a44718b43a1eb837f6cfb34c9a7b0 132 ProSitePatterns PS00552 MerR-type HTH domain signature. 9 31 - T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS08355 5c7a44718b43a1eb837f6cfb34c9a7b0 132 Gene3D G3DSA:1.10.1660.10 60 120 3.2E-16 T 13-09-2016 PMA3_RS01210 5dcad4d9d50b90681e9c22e22a3ae1bc 816 Gene3D G3DSA:3.40.50.2000 9 481 8.3E-196 T 13-09-2016 PMA3_RS01210 5dcad4d9d50b90681e9c22e22a3ae1bc 816 Pfam PF00343 Carbohydrate phosphorylase 100 813 1.8E-298 T 13-09-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PMA3_RS01210 5dcad4d9d50b90681e9c22e22a3ae1bc 816 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 13 813 0.0 T 13-09-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PMA3_RS01210 5dcad4d9d50b90681e9c22e22a3ae1bc 816 PIRSF PIRSF000460 1 816 3.6E-220 T 13-09-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PMA3_RS01210 5dcad4d9d50b90681e9c22e22a3ae1bc 816 SUPERFAMILY SSF53756 9 813 0.0 T 13-09-2016 PMA3_RS01210 5dcad4d9d50b90681e9c22e22a3ae1bc 816 Gene3D G3DSA:3.40.50.2000 482 799 6.1E-119 T 13-09-2016 PMA3_RS01210 5dcad4d9d50b90681e9c22e22a3ae1bc 816 PANTHER PTHR11468:SF3 9 813 0.0 T 13-09-2016 PMA3_RS01210 5dcad4d9d50b90681e9c22e22a3ae1bc 816 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 658 670 - T 13-09-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PMA3_RS01210 5dcad4d9d50b90681e9c22e22a3ae1bc 816 PANTHER PTHR11468 9 813 0.0 T 13-09-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PMA3_RS02265 e12f05847376d2d5fad99d62ec9c3f94 375 SUPERFAMILY SSF48208 15 374 3.06E-81 T 13-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PMA3_RS02265 e12f05847376d2d5fad99d62ec9c3f94 375 Gene3D G3DSA:1.50.10.10 13 366 4.5E-52 T 13-09-2016 IPR012341 Six-hairpin glycosidase GO:0003824 PMA3_RS02265 e12f05847376d2d5fad99d62ec9c3f94 375 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 45 366 1.2E-39 T 13-09-2016 PMA3_RS02265 e12f05847376d2d5fad99d62ec9c3f94 375 PANTHER PTHR15108 7 313 8.1E-16 T 13-09-2016 PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 Gene3D G3DSA:1.10.540.10 38 159 4.8E-20 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 PANTHER PTHR10909:SF296 1 475 3.1E-263 T 13-09-2016 PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 592 4.6E-35 T 13-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 SUPERFAMILY SSF56645 34 291 9.29E-59 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 SUPERFAMILY SSF47203 286 474 1.51E-51 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 PANTHER PTHR10909 1 475 3.1E-263 T 13-09-2016 PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 450 1.1E-23 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 5.7E-13 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 9.2E-18 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 29 8.1E-8 T 13-09-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 Gene3D G3DSA:2.40.110.10 160 267 1.7E-27 T 13-09-2016 PMA3_RS27760 c0ee501a688d841cbdb2ff28f53fd9eb 598 Gene3D G3DSA:1.20.140.10 268 461 2.1E-53 T 13-09-2016 PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 Pfam PF00294 pfkB family carbohydrate kinase 3 295 1.3E-71 T 13-09-2016 IPR011611 Carbohydrate kinase PfkB PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 SUPERFAMILY SSF53613 3 302 4.52E-84 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 PANTHER PTHR10584:SF184 1 300 4.0E-95 T 13-09-2016 PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 PANTHER PTHR10584 1 300 4.0E-95 T 13-09-2016 PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 13-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 PRINTS PR00990 Ribokinase signature 7 28 1.3E-36 T 13-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 PRINTS PR00990 Ribokinase signature 105 118 1.3E-36 T 13-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 PRINTS PR00990 Ribokinase signature 174 189 1.3E-36 T 13-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 PRINTS PR00990 Ribokinase signature 34 53 1.3E-36 T 13-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 PRINTS PR00990 Ribokinase signature 218 229 1.3E-36 T 13-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 Gene3D G3DSA:3.40.1190.20 2 302 3.7E-96 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS09315 9360259184a3659a1e1eb9dc0c8cb0f6 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 300 4.8E-113 T 13-09-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 7.0E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.0E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.0E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.0E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.0E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.0E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 SUPERFAMILY SSF51735 6 254 1.33E-68 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 Pfam PF00106 short chain dehydrogenase 7 188 9.4E-52 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.4E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.4E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 0.0028 T 13-09-2016 PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 PANTHER PTHR24322 11 188 7.1E-45 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11000 6244d5752d91594f2d0f910d2bacdd42 257 Gene3D G3DSA:3.40.50.720 1 254 1.6E-70 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS19655 6cb3116021e8709d956336f992673431 253 Pfam PF03958 Bacterial type II/III secretion system short domain 22 80 7.6E-9 T 13-09-2016 IPR005644 NolW-like PMA3_RS19655 6cb3116021e8709d956336f992673431 253 Pfam PF00263 Bacterial type II and III secretion system protein 125 228 4.0E-9 T 13-09-2016 IPR004846 Type II/III secretion system GO:0009306 PMA3_RS08960 4b592f4e42c0328cbc6461b51ef6717c 150 SUPERFAMILY SSF49764 11 140 5.23E-20 T 13-09-2016 IPR008978 HSP20-like chaperone PMA3_RS08960 4b592f4e42c0328cbc6461b51ef6717c 150 Pfam PF00011 Hsp20/alpha crystallin family 44 140 2.0E-15 T 13-09-2016 IPR002068 Alpha crystallin/Hsp20 domain PMA3_RS08960 4b592f4e42c0328cbc6461b51ef6717c 150 PANTHER PTHR11527:SF127 1 147 4.2E-71 T 13-09-2016 PMA3_RS08960 4b592f4e42c0328cbc6461b51ef6717c 150 Gene3D G3DSA:2.60.40.790 11 140 8.7E-17 T 13-09-2016 IPR008978 HSP20-like chaperone PMA3_RS08960 4b592f4e42c0328cbc6461b51ef6717c 150 PANTHER PTHR11527 1 147 4.2E-71 T 13-09-2016 IPR031107 Small heat shock protein HSP20 PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 Gene3D G3DSA:3.40.190.10 97 181 7.0E-18 T 13-09-2016 PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 PANTHER PTHR30126:SF5 7 313 5.9E-132 T 13-09-2016 PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 SUPERFAMILY SSF53850 96 298 2.66E-48 T 13-09-2016 PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 SUPERFAMILY SSF46785 5 85 1.47E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 Pfam PF03466 LysR substrate binding domain 94 297 1.7E-51 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 Gene3D G3DSA:1.10.10.10 8 94 8.6E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 PANTHER PTHR30126 7 313 5.9E-132 T 13-09-2016 PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 9.5E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 9.5E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 9.5E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.1E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29835 b538f9572ea9ef2c9368c6dcd509d6b2 320 Gene3D G3DSA:3.40.190.10 182 269 7.1E-23 T 13-09-2016 PMA3_RS05565 6fbdf7027841df989baa0fa928284453 701 PANTHER PTHR37291 5 180 3.0E-74 T 13-09-2016 PMA3_RS05565 6fbdf7027841df989baa0fa928284453 701 Gene3D G3DSA:3.40.50.300 6 85 4.8E-12 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05565 6fbdf7027841df989baa0fa928284453 701 Gene3D G3DSA:3.40.50.300 395 482 4.8E-12 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05565 6fbdf7027841df989baa0fa928284453 701 PANTHER PTHR37291 356 622 3.0E-74 T 13-09-2016 PMA3_RS05565 6fbdf7027841df989baa0fa928284453 701 SUPERFAMILY SSF52540 6 100 1.61E-10 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05565 6fbdf7027841df989baa0fa928284453 701 SUPERFAMILY SSF52540 398 487 1.61E-10 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05565 6fbdf7027841df989baa0fa928284453 701 Pfam PF07728 AAA domain (dynein-related subfamily) 397 478 5.9E-9 T 13-09-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PMA3_RS05565 6fbdf7027841df989baa0fa928284453 701 PANTHER PTHR37291:SF1 356 622 3.0E-74 T 13-09-2016 PMA3_RS05565 6fbdf7027841df989baa0fa928284453 701 PANTHER PTHR37291:SF1 5 180 3.0E-74 T 13-09-2016 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 SUPERFAMILY SSF55785 233 282 6.11E-8 T 13-09-2016 IPR000014 PAS domain PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 Pfam PF00158 Sigma-54 interaction domain 332 496 1.3E-61 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 PANTHER PTHR32071 293 629 1.4E-133 T 13-09-2016 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 Pfam PF02954 Bacterial regulatory protein, Fis family 589 625 3.8E-10 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 SUPERFAMILY SSF52540 337 570 7.03E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 Gene3D G3DSA:1.10.8.60 520 569 1.0E-10 T 13-09-2016 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 Gene3D G3DSA:3.30.450.20 234 280 3.8E-7 T 13-09-2016 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 Pfam PF13426 PAS domain 242 283 2.0E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 539 548 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 SUPERFAMILY SSF55781 70 193 2.22E-6 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 353 366 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 SUPERFAMILY SSF46689 581 627 6.09E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 Gene3D G3DSA:1.10.10.60 582 627 2.6E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 Gene3D G3DSA:3.40.50.300 332 502 9.5E-50 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 591 608 2.0E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 608 628 2.0E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 SMART SM00382 349 493 3.2E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 416 431 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS14450 c19852f8b5c7ba779ae003b597fc70b2 631 PANTHER PTHR32071:SF5 293 629 1.4E-133 T 13-09-2016 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 118 128 - T 13-09-2016 IPR027475 Asparaginase/glutaminase, active site 2 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 Pfam PF00710 Asparaginase, N-terminal 36 224 8.7E-53 T 13-09-2016 IPR027474 L-asparaginase, N-terminal PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 39 47 - T 13-09-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 PANTHER PTHR11707:SF29 28 359 8.0E-85 T 13-09-2016 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 PRINTS PR00139 Asparaginase/glutaminase family signature 117 135 8.1E-21 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 PRINTS PR00139 Asparaginase/glutaminase family signature 295 313 8.1E-21 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 PRINTS PR00139 Asparaginase/glutaminase family signature 37 48 8.1E-21 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 PIRSF PIRSF500176 33 362 7.5E-77 T 13-09-2016 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 Gene3D G3DSA:3.40.50.1170 33 244 8.1E-64 T 13-09-2016 IPR027474 L-asparaginase, N-terminal PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 SMART SM00870 36 356 6.4E-131 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 PANTHER PTHR11707 28 359 8.0E-85 T 13-09-2016 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 Gene3D G3DSA:3.40.50.40 248 360 2.5E-37 T 13-09-2016 IPR027473 L-asparaginase, C-terminal domain PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 SUPERFAMILY SSF53774 34 361 7.46E-98 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 25 362 1.7E-119 T 13-09-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 PMA3_RS09290 800eee9b4a8853523af5fe0358889a46 362 PIRSF PIRSF001220 31 362 5.9E-86 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 256 7.1E-55 T 13-09-2016 PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 2.2E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 2.2E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 2.2E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 SUPERFAMILY SSF51735 16 257 8.23E-64 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 5.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 5.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 5.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 5.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 5.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 5.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PANTHER PTHR24322 169 200 6.5E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 PANTHER PTHR24322 21 153 6.5E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11860 85c0d73f9d6e8fcc25751be80d4362c8 261 Gene3D G3DSA:3.40.50.720 14 257 7.4E-67 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04270 52cf269346c36cbf3808f94f45328866 342 Gene3D G3DSA:3.40.190.10 18 144 1.0E-20 T 13-09-2016 PMA3_RS04270 52cf269346c36cbf3808f94f45328866 342 SMART SM00062 37 266 1.1E-52 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS04270 52cf269346c36cbf3808f94f45328866 342 PANTHER PTHR30085:SF5 1 311 2.0E-178 T 13-09-2016 PMA3_RS04270 52cf269346c36cbf3808f94f45328866 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 255 6.5E-30 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS04270 52cf269346c36cbf3808f94f45328866 342 Gene3D G3DSA:3.40.190.10 145 228 3.2E-13 T 13-09-2016 PMA3_RS04270 52cf269346c36cbf3808f94f45328866 342 PANTHER PTHR30085 1 311 2.0E-178 T 13-09-2016 PMA3_RS04270 52cf269346c36cbf3808f94f45328866 342 SUPERFAMILY SSF53850 28 259 5.43E-49 T 13-09-2016 PMA3_RS02810 884193370a8d83c49481da2403072342 387 PANTHER PTHR11014 1 387 8.5E-100 T 13-09-2016 PMA3_RS02810 884193370a8d83c49481da2403072342 387 Gene3D G3DSA:3.40.630.10 6 184 3.3E-61 T 13-09-2016 PMA3_RS02810 884193370a8d83c49481da2403072342 387 Gene3D G3DSA:3.40.630.10 325 384 3.3E-61 T 13-09-2016 PMA3_RS02810 884193370a8d83c49481da2403072342 387 SUPERFAMILY SSF55031 178 283 7.03E-20 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS02810 884193370a8d83c49481da2403072342 387 SUPERFAMILY SSF53187 306 384 1.44E-55 T 13-09-2016 PMA3_RS02810 884193370a8d83c49481da2403072342 387 SUPERFAMILY SSF53187 7 175 1.44E-55 T 13-09-2016 PMA3_RS02810 884193370a8d83c49481da2403072342 387 PANTHER PTHR11014:SF80 1 387 8.5E-100 T 13-09-2016 PMA3_RS02810 884193370a8d83c49481da2403072342 387 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 379 1.6E-121 T 13-09-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 PMA3_RS02810 884193370a8d83c49481da2403072342 387 Gene3D G3DSA:3.30.70.360 185 280 7.0E-23 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS02810 884193370a8d83c49481da2403072342 387 Pfam PF01546 Peptidase family M20/M25/M40 69 379 1.2E-34 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS02810 884193370a8d83c49481da2403072342 387 Pfam PF07687 Peptidase dimerisation domain 173 281 2.8E-21 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS02810 884193370a8d83c49481da2403072342 387 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 102 139 - T 13-09-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PMA3_RS26945 b008b4708c62766bed733852dccc5f77 158 SUPERFAMILY SSF52121 5 155 2.62E-61 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26945 b008b4708c62766bed733852dccc5f77 158 PANTHER PTHR21058 1 157 1.7E-75 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26945 b008b4708c62766bed733852dccc5f77 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 155 31.071 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26945 b008b4708c62766bed733852dccc5f77 158 Gene3D G3DSA:3.40.50.960 5 156 2.6E-64 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26945 b008b4708c62766bed733852dccc5f77 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 152 4.4E-55 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26945 b008b4708c62766bed733852dccc5f77 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 16 151 3.2E-53 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 PANTHER PTHR11472 175 748 1.3E-70 T 13-09-2016 PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 SMART SM00491 602 737 1.5E-7 T 13-09-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 Gene3D G3DSA:3.40.50.300 334 401 3.8E-15 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 Gene3D G3DSA:3.40.50.300 177 285 3.8E-15 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 Gene3D G3DSA:3.40.50.300 519 531 3.8E-15 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 SUPERFAMILY SSF52540 517 731 1.93E-19 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 SUPERFAMILY SSF52540 319 392 1.93E-19 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 SUPERFAMILY SSF52540 195 255 1.93E-19 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 Gene3D G3DSA:3.40.50.300 573 675 4.2E-8 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 Gene3D G3DSA:3.40.50.300 707 733 4.2E-8 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 Pfam PF13307 Helicase C-terminal domain 588 749 2.7E-31 T 13-09-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 Pfam PF06733 DEAD_2 270 390 1.7E-13 T 13-09-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 PMA3_RS13785 1694394b906b87dc72cb2a26aebc3a53 752 SMART SM00488 174 418 2.5E-4 T 13-09-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 PMA3_RS19985 d8c3230bc15d141832684a915bc2cf47 415 Gene3D G3DSA:2.30.40.10 3 62 4.2E-6 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19985 d8c3230bc15d141832684a915bc2cf47 415 PANTHER PTHR32027:SF0 1 404 1.0E-142 T 13-09-2016 PMA3_RS19985 d8c3230bc15d141832684a915bc2cf47 415 Pfam PF07969 Amidohydrolase family 91 379 1.4E-39 T 13-09-2016 IPR013108 Amidohydrolase 3 PMA3_RS19985 d8c3230bc15d141832684a915bc2cf47 415 SUPERFAMILY SSF51338 2 60 9.3E-10 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19985 d8c3230bc15d141832684a915bc2cf47 415 PANTHER PTHR32027 1 404 1.0E-142 T 13-09-2016 PMA3_RS19985 d8c3230bc15d141832684a915bc2cf47 415 SUPERFAMILY SSF51556 51 371 1.92E-107 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS19985 d8c3230bc15d141832684a915bc2cf47 415 Gene3D G3DSA:3.20.20.140 63 360 2.5E-118 T 13-09-2016 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 PANTHER PTHR18919:SF110 3 397 7.5E-223 T 13-09-2016 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 Pfam PF02803 Thiolase, C-terminal domain 273 394 1.9E-42 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 SUPERFAMILY SSF53901 274 394 1.55E-39 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 ProSitePatterns PS00099 Thiolases active site. 377 390 - T 13-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 Gene3D G3DSA:3.40.47.10 146 198 1.7E-56 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 Gene3D G3DSA:3.40.47.10 280 395 1.7E-56 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 394 1.2E-129 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 PANTHER PTHR18919 3 397 7.5E-223 T 13-09-2016 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 SUPERFAMILY SSF53901 8 273 1.65E-81 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 PIRSF PIRSF000429 2 397 9.8E-118 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 Gene3D G3DSA:3.40.47.10 8 127 1.0E-72 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 Gene3D G3DSA:3.40.47.10 199 279 1.0E-72 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS14845 a90877aaea9a385f98bfec5e38079048 397 Pfam PF00108 Thiolase, N-terminal domain 8 266 4.9E-89 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS27180 c4480b2e5b9837159f2dc2b87990b69a 166 SUPERFAMILY SSF54768 9 77 5.96E-23 T 13-09-2016 PMA3_RS27180 c4480b2e5b9837159f2dc2b87990b69a 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 90 158 3.3E-31 T 13-09-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 PMA3_RS27180 c4480b2e5b9837159f2dc2b87990b69a 166 PANTHER PTHR13718 10 165 2.2E-72 T 13-09-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27180 c4480b2e5b9837159f2dc2b87990b69a 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 33.681 T 13-09-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PMA3_RS27180 c4480b2e5b9837159f2dc2b87990b69a 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 75 2.6E-27 T 13-09-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS27180 c4480b2e5b9837159f2dc2b87990b69a 166 Gene3D G3DSA:3.30.160.20 11 73 3.2E-28 T 13-09-2016 IPR014720 Double-stranded RNA-binding domain PMA3_RS27180 c4480b2e5b9837159f2dc2b87990b69a 166 SUPERFAMILY SSF54211 81 160 8.34E-26 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS27180 c4480b2e5b9837159f2dc2b87990b69a 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 164 2.2E-64 T 13-09-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PMA3_RS27180 c4480b2e5b9837159f2dc2b87990b69a 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 13-09-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site PMA3_RS27180 c4480b2e5b9837159f2dc2b87990b69a 166 Gene3D G3DSA:3.30.230.10 78 160 5.5E-32 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS15565 8604fc96c0ef32e0efa3212a427ebd8e 494 PANTHER PTHR30618 1 488 2.9E-184 T 13-09-2016 PMA3_RS15565 8604fc96c0ef32e0efa3212a427ebd8e 494 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 39 474 1.2E-88 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS15565 8604fc96c0ef32e0efa3212a427ebd8e 494 PANTHER PTHR30618:SF0 1 488 2.9E-184 T 13-09-2016 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 PANTHER PTHR34069 1 25 8.4E-198 T 13-09-2016 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 PANTHER PTHR34069 50 70 8.4E-198 T 13-09-2016 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 SUPERFAMILY SSF53901 2 372 9.32E-52 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 PANTHER PTHR34069:SF1 1 25 8.4E-198 T 13-09-2016 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 PANTHER PTHR34069:SF1 50 70 8.4E-198 T 13-09-2016 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 Gene3D G3DSA:3.40.47.10 3 204 1.3E-48 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 PANTHER PTHR34069 91 371 8.4E-198 T 13-09-2016 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 Gene3D G3DSA:3.40.47.10 205 371 5.9E-30 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 371 3.1E-24 T 13-09-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 214 2.4E-17 T 13-09-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PMA3_RS22180 1e5aa156df8d45bd28adebaf32ad4ffd 373 PANTHER PTHR34069:SF1 91 371 8.4E-198 T 13-09-2016 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 SMART SM00388 368 436 1.5E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 PANTHER PTHR24423 312 600 4.0E-146 T 13-09-2016 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 PANTHER PTHR24423:SF469 183 245 4.0E-146 T 13-09-2016 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 PANTHER PTHR24423:SF469 24 49 4.0E-146 T 13-09-2016 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 SUPERFAMILY SSF55874 423 585 4.06E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 SUPERFAMILY SSF103190 58 193 2.88E-24 T 13-09-2016 IPR029151 Periplasmic sensor domain-like PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 Pfam PF00512 His Kinase A (phospho-acceptor) domain 368 434 1.3E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 Gene3D G3DSA:3.30.565.10 438 585 1.3E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 SUPERFAMILY SSF47384 356 435 4.71E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 SMART SM00387 478 589 2.6E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 586 2.2E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 PIRSF PIRSF036431 2 593 1.2E-197 T 13-09-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 PANTHER PTHR24423 183 245 4.0E-146 T 13-09-2016 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 PANTHER PTHR24423 24 49 4.0E-146 T 13-09-2016 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 Gene3D G3DSA:1.10.287.130 368 432 9.3E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 2.1E-7 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 532 2.1E-7 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 546 2.1E-7 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 PANTHER PTHR24423:SF469 312 600 4.0E-146 T 13-09-2016 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 Pfam PF02743 Cache domain 43 223 4.5E-12 T 13-09-2016 IPR033479 Double Cache domain 1 PMA3_RS00915 4bbe0ea60b1dafe46c73e4c3201f2f3b 602 Gene3D G3DSA:3.30.450.20 92 182 1.6E-5 T 13-09-2016 PMA3_RS06600 4ec9cd4027522155d1b07919e8c0c30b 431 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 4 404 4.8E-160 T 13-09-2016 IPR021228 Protein of unknown function DUF2791 PMA3_RS06600 4ec9cd4027522155d1b07919e8c0c30b 431 SUPERFAMILY SSF52540 33 119 2.38E-6 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06600 4ec9cd4027522155d1b07919e8c0c30b 431 SUPERFAMILY SSF52540 236 343 2.38E-6 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26940 0cb826f388d78b63093f40c932cf0d66 166 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 27 154 3.5E-43 T 13-09-2016 IPR011605 NusB antitermination factor GO:0006353 PMA3_RS26940 0cb826f388d78b63093f40c932cf0d66 166 Gene3D G3DSA:1.10.940.10 24 159 2.5E-44 T 13-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PMA3_RS26940 0cb826f388d78b63093f40c932cf0d66 166 PANTHER PTHR11078 28 160 5.1E-46 T 13-09-2016 IPR011605 NusB antitermination factor GO:0006353 PMA3_RS26940 0cb826f388d78b63093f40c932cf0d66 166 SUPERFAMILY SSF48013 26 157 1.96E-42 T 13-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PMA3_RS26940 0cb826f388d78b63093f40c932cf0d66 166 Pfam PF01029 NusB family 30 153 3.2E-33 T 13-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PMA3_RS26940 0cb826f388d78b63093f40c932cf0d66 166 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 26 157 22.277 T 13-09-2016 IPR011605 NusB antitermination factor GO:0006353 PMA3_RS03460 0fc9ea286e76bc2f459696f686132121 266 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 264 42.155 T 13-09-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS03460 0fc9ea286e76bc2f459696f686132121 266 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 4 264 4.0E-103 T 13-09-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS03460 0fc9ea286e76bc2f459696f686132121 266 PANTHER PTHR20881:SF3 1 264 4.5E-167 T 13-09-2016 PMA3_RS03460 0fc9ea286e76bc2f459696f686132121 266 PANTHER PTHR20881 1 264 4.5E-167 T 13-09-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS03460 0fc9ea286e76bc2f459696f686132121 266 SUPERFAMILY SSF51621 4 264 3.86E-104 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS03460 0fc9ea286e76bc2f459696f686132121 266 PIRSF PIRSF000388 2 266 1.6E-99 T 13-09-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS03460 0fc9ea286e76bc2f459696f686132121 266 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 259 3.1E-107 T 13-09-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS03460 0fc9ea286e76bc2f459696f686132121 266 Gene3D G3DSA:3.20.20.60 3 264 2.8E-110 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS14870 348494e88e90c1fca9a16acc80cada24 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.7E-8 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS14870 348494e88e90c1fca9a16acc80cada24 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.7E-8 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS14870 348494e88e90c1fca9a16acc80cada24 187 PANTHER PTHR30055:SF47 1 186 1.4E-34 T 13-09-2016 PMA3_RS14870 348494e88e90c1fca9a16acc80cada24 187 Gene3D G3DSA:1.10.357.10 6 175 2.5E-33 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS14870 348494e88e90c1fca9a16acc80cada24 187 SUPERFAMILY SSF46689 6 85 4.49E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14870 348494e88e90c1fca9a16acc80cada24 187 PANTHER PTHR30055 1 186 1.4E-34 T 13-09-2016 PMA3_RS14870 348494e88e90c1fca9a16acc80cada24 187 SUPERFAMILY SSF48498 79 185 4.08E-20 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS14870 348494e88e90c1fca9a16acc80cada24 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 5.6E-14 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS22225 e1f1b378e419347d37d3a15126693d52 318 PANTHER PTHR21240:SF9 6 310 1.3E-98 T 13-09-2016 PMA3_RS22225 e1f1b378e419347d37d3a15126693d52 318 SUPERFAMILY SSF51556 8 300 3.74E-45 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS22225 e1f1b378e419347d37d3a15126693d52 318 Pfam PF04909 Amidohydrolase 10 300 3.4E-37 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS22225 e1f1b378e419347d37d3a15126693d52 318 PANTHER PTHR21240 6 310 1.3E-98 T 13-09-2016 PMA3_RS22225 e1f1b378e419347d37d3a15126693d52 318 Gene3D G3DSA:3.20.20.140 8 302 5.0E-54 T 13-09-2016 PMA3_RS23920 17f726a0fa80a467b76ded4cf9d83a87 319 Pfam PF00034 Cytochrome c 197 295 4.0E-4 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS23920 17f726a0fa80a467b76ded4cf9d83a87 319 PIRSF PIRSF000294 20 316 2.7E-91 T 13-09-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 PMA3_RS23920 17f726a0fa80a467b76ded4cf9d83a87 319 SUPERFAMILY SSF46626 26 174 6.73E-46 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS23920 17f726a0fa80a467b76ded4cf9d83a87 319 PANTHER PTHR30600:SF7 26 313 3.8E-95 T 13-09-2016 PMA3_RS23920 17f726a0fa80a467b76ded4cf9d83a87 319 Gene3D G3DSA:1.10.760.10 179 313 5.8E-40 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS23920 17f726a0fa80a467b76ded4cf9d83a87 319 PANTHER PTHR30600 26 313 3.8E-95 T 13-09-2016 PMA3_RS23920 17f726a0fa80a467b76ded4cf9d83a87 319 Pfam PF03150 Di-haem cytochrome c peroxidase 42 187 8.8E-48 T 13-09-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 PMA3_RS23920 17f726a0fa80a467b76ded4cf9d83a87 319 SUPERFAMILY SSF46626 176 313 8.57E-35 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS23920 17f726a0fa80a467b76ded4cf9d83a87 319 Gene3D G3DSA:1.10.760.10 32 178 2.3E-47 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS10430 eee773b182838ef8b3f40861e58f9320 838 SUPERFAMILY SSF82866 239 414 2.09E-26 T 13-09-2016 PMA3_RS10430 eee773b182838ef8b3f40861e58f9320 838 PANTHER PTHR33406 15 117 3.7E-88 T 13-09-2016 PMA3_RS10430 eee773b182838ef8b3f40861e58f9320 838 PANTHER PTHR33406 152 808 3.7E-88 T 13-09-2016 PMA3_RS10430 eee773b182838ef8b3f40861e58f9320 838 Pfam PF03176 MMPL family 608 806 1.9E-12 T 13-09-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PMA3_RS10430 eee773b182838ef8b3f40861e58f9320 838 Pfam PF03176 MMPL family 229 449 1.8E-4 T 13-09-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PMA3_RS10430 eee773b182838ef8b3f40861e58f9320 838 Gene3D G3DSA:1.20.1640.10 640 809 6.1E-25 T 13-09-2016 PMA3_RS10430 eee773b182838ef8b3f40861e58f9320 838 Gene3D G3DSA:1.20.1640.10 238 421 6.3E-24 T 13-09-2016 PMA3_RS10430 eee773b182838ef8b3f40861e58f9320 838 SUPERFAMILY SSF82866 611 809 6.41E-31 T 13-09-2016 PMA3_RS10430 eee773b182838ef8b3f40861e58f9320 838 PANTHER PTHR33406:SF2 152 808 3.7E-88 T 13-09-2016 PMA3_RS10430 eee773b182838ef8b3f40861e58f9320 838 PANTHER PTHR33406:SF2 15 117 3.7E-88 T 13-09-2016 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 PANTHER PTHR23115 248 465 3.9E-240 T 13-09-2016 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 PANTHER PTHR23115 1 182 3.9E-240 T 13-09-2016 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 13-09-2016 IPR031157 Tr-type G domain, conserved site PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 Gene3D G3DSA:3.30.70.870 392 461 2.2E-15 T 13-09-2016 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 Pfam PF03144 Elongation factor Tu domain 2 311 377 5.2E-12 T 13-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 Pfam PF00009 Elongation factor Tu GTP binding domain 11 274 6.8E-47 T 13-09-2016 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 524 51.198 T 13-09-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 SUPERFAMILY SSF54980 390 465 3.09E-18 T 13-09-2016 IPR009022 Elongation factor G, III-V domain PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 SUPERFAMILY SSF50447 259 390 2.59E-30 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 PRINTS PR00315 GTP-binding elongation factor signature 135 144 7.6E-12 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 PRINTS PR00315 GTP-binding elongation factor signature 13 26 7.6E-12 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 PRINTS PR00315 GTP-binding elongation factor signature 83 93 7.6E-12 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 PRINTS PR00315 GTP-binding elongation factor signature 99 110 7.6E-12 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 PRINTS PR00315 GTP-binding elongation factor signature 63 71 7.6E-12 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.2E-16 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 511 1.4E-45 T 13-09-2016 IPR032090 Peptide chain release factor 3, C-terminal PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 SUPERFAMILY SSF52540 8 274 1.43E-85 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 Gene3D G3DSA:2.40.30.10 289 390 5.0E-26 T 13-09-2016 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 PANTHER PTHR23115:SF69 248 465 3.9E-240 T 13-09-2016 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 PANTHER PTHR23115:SF69 1 182 3.9E-240 T 13-09-2016 PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 Gene3D G3DSA:3.40.50.300 8 278 1.5E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25355 60e83779d98c6dcda725469a9cb0f5e9 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 526 4.1E-260 T 13-09-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 Gene3D G3DSA:3.40.50.720 6 190 9.7E-48 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 Pfam PF00106 short chain dehydrogenase 7 183 9.3E-34 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 SUPERFAMILY SSF51735 5 192 3.27E-48 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PANTHER PTHR24322 10 128 4.4E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PANTHER PTHR24322 144 176 4.4E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PANTHER PTHR24322:SF546 10 128 4.4E-41 T 13-09-2016 PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PANTHER PTHR24322:SF546 144 176 4.4E-41 T 13-09-2016 PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 9.4E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 9.4E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 9.4E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 3.9E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 3.9E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.9E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 3.9E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18395 33bd27e1996c76fffdd014d5903e0522 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 3.9E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10590 0a4e40d233440c91dcbfeac5eb9f959d 1123 Pfam PF06761 Intracellular multiplication and human macrophage-killing 408 723 3.6E-73 T 13-09-2016 IPR009612 ImcF-related PMA3_RS10590 0a4e40d233440c91dcbfeac5eb9f959d 1123 PANTHER PTHR36153:SF1 15 1109 2.1E-149 T 13-09-2016 PMA3_RS10590 0a4e40d233440c91dcbfeac5eb9f959d 1123 PANTHER PTHR36153 15 1109 2.1E-149 T 13-09-2016 PMA3_RS10590 0a4e40d233440c91dcbfeac5eb9f959d 1123 Pfam PF06744 Type VI secretion protein IcmF C-terminal 854 1051 2.1E-50 T 13-09-2016 IPR010623 Type VI secretion system IcmF, C-terminal PMA3_RS19995 29b8fe81b463729b928e1a80ac848766 383 PANTHER PTHR23514:SF13 14 381 1.8E-115 T 13-09-2016 PMA3_RS19995 29b8fe81b463729b928e1a80ac848766 383 SUPERFAMILY SSF103473 22 376 1.83E-35 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS19995 29b8fe81b463729b928e1a80ac848766 383 Gene3D G3DSA:1.20.1250.20 22 182 3.9E-14 T 13-09-2016 PMA3_RS19995 29b8fe81b463729b928e1a80ac848766 383 PANTHER PTHR23514 14 381 1.8E-115 T 13-09-2016 PMA3_RS19995 29b8fe81b463729b928e1a80ac848766 383 Pfam PF07690 Major Facilitator Superfamily 22 182 2.9E-9 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS19995 29b8fe81b463729b928e1a80ac848766 383 Pfam PF07690 Major Facilitator Superfamily 226 376 6.7E-9 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS19995 29b8fe81b463729b928e1a80ac848766 383 Gene3D G3DSA:1.20.1250.20 210 380 2.4E-13 T 13-09-2016 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 SUPERFAMILY SSF56003 334 762 6.54E-114 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 Gene3D G3DSA:3.30.365.10 542 762 1.5E-46 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 PIRSF PIRSF036389 4 769 7.5E-266 T 13-09-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 Gene3D G3DSA:3.30.365.10 59 187 1.6E-35 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 SMART SM01008 223 312 7.7E-31 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 SUPERFAMILY SSF56003 12 256 5.93E-43 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 PANTHER PTHR11908 63 765 2.8E-223 T 13-09-2016 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 PANTHER PTHR11908:SF2 63 765 2.8E-223 T 13-09-2016 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 332 616 3.4E-33 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 62 188 2.4E-13 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 629 710 1.0E-14 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 Gene3D G3DSA:3.30.365.10 339 456 3.1E-27 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 Gene3D G3DSA:3.90.1170.50 192 310 6.5E-25 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 36 2.0E-4 T 13-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PMA3_RS06195 b4ad57af45e733085859dcd447d9f292 773 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 224 276 3.0E-6 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Pfam PF00476 DNA polymerase family A 548 920 1.0E-150 T 13-09-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Gene3D G3DSA:3.40.50.1010 5 182 3.6E-68 T 13-09-2016 IPR029060 PIN domain-like PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Pfam PF01612 3'-5' exonuclease 315 509 3.0E-31 T 13-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 270 1.0E-28 T 13-09-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 SUPERFAMILY SSF88723 5 167 9.25E-52 T 13-09-2016 IPR029060 PIN domain-like PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Gene3D G3DSA:1.10.150.20 183 251 8.5E-24 T 13-09-2016 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 SMART SM00474 315 510 3.9E-29 T 13-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 SUPERFAMILY SSF53098 313 510 4.55E-47 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Gene3D G3DSA:1.10.150.20 706 812 1.7E-34 T 13-09-2016 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Gene3D G3DSA:3.30.420.10 313 535 2.1E-75 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 SMART SM00279 170 205 5.0E-15 T 13-09-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 SMART SM00482 680 886 1.9E-114 T 13-09-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 SMART SM00475 4 266 6.6E-120 T 13-09-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PANTHER PTHR10133:SF27 1 921 0.0 T 13-09-2016 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 6.3E-50 T 13-09-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Gene3D G3DSA:3.30.70.370 657 705 4.3E-68 T 13-09-2016 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Gene3D G3DSA:3.30.70.370 813 922 4.3E-68 T 13-09-2016 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 869 882 7.6E-77 T 13-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 694 717 7.6E-77 T 13-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 672 687 7.6E-77 T 13-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 785 796 7.6E-77 T 13-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 839 855 7.6E-77 T 13-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 748 773 7.6E-77 T 13-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 724 737 7.6E-77 T 13-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 807 818 7.6E-77 T 13-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 649 671 7.6E-77 T 13-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 PANTHER PTHR10133 1 921 0.0 T 13-09-2016 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 SUPERFAMILY SSF56672 517 922 6.78E-155 T 13-09-2016 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 ProSitePatterns PS00447 DNA polymerase family A signature. 748 767 - T 13-09-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 TIGRFAM TIGR00593 pola: DNA polymerase I 6 922 4.8E-281 T 13-09-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 SUPERFAMILY SSF47807 168 288 1.03E-29 T 13-09-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PMA3_RS00005 6e99b78174482bb8ea5d9495d54403ce 922 Gene3D G3DSA:1.20.1060.10 536 656 5.4E-33 T 13-09-2016 PMA3_RS05160 4fa6a602562e3b77472e24400a240207 254 PANTHER PTHR24220 5 254 9.6E-157 T 13-09-2016 PMA3_RS05160 4fa6a602562e3b77472e24400a240207 254 SMART SM00382 28 226 4.2E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS05160 4fa6a602562e3b77472e24400a240207 254 Pfam PF00005 ABC transporter 19 178 9.0E-35 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS05160 4fa6a602562e3b77472e24400a240207 254 Gene3D G3DSA:3.40.50.300 4 249 8.4E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05160 4fa6a602562e3b77472e24400a240207 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS05160 4fa6a602562e3b77472e24400a240207 254 PIRSF PIRSF039085 1 254 4.2E-116 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS05160 4fa6a602562e3b77472e24400a240207 254 SUPERFAMILY SSF52540 4 248 3.36E-74 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05160 4fa6a602562e3b77472e24400a240207 254 PANTHER PTHR24220:SF347 5 254 9.6E-157 T 13-09-2016 PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 SUPERFAMILY SSF141868 415 645 6.28E-44 T 13-09-2016 IPR001633 EAL domain PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 Pfam PF00672 HAMP domain 152 219 2.7E-9 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 Gene3D G3DSA:3.20.20.450 412 645 1.3E-39 T 13-09-2016 IPR001633 EAL domain PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 Gene3D G3DSA:3.30.70.270 238 390 6.4E-19 T 13-09-2016 PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 SMART SM00052 408 644 7.3E-11 T 13-09-2016 IPR001633 EAL domain PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 SUPERFAMILY SSF55073 241 391 2.59E-17 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 Pfam PF00563 EAL domain 416 643 4.3E-45 T 13-09-2016 IPR001633 EAL domain PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 PANTHER PTHR33121:SF10 412 646 1.1E-30 T 13-09-2016 PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 232 388 1.1E-12 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 SMART SM00304 171 223 1.8E-4 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 Pfam PF16448 LapD/MoxY periplasmic domain 23 145 5.1E-38 T 13-09-2016 IPR032244 LapD/MoxY, periplasmic domain PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 PANTHER PTHR33121 412 646 1.1E-30 T 13-09-2016 PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 389 3.1E-17 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS22015 2027a1d20b3ada7e116b2f56a26e2443 646 SMART SM00267 225 398 7.7E-11 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 SMART SM00962 100 296 7.0E-115 T 13-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 443 34.377 T 13-09-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 Gene3D G3DSA:1.20.120.140 2 88 1.9E-35 T 13-09-2016 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.2E-21 T 13-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 SUPERFAMILY SSF47446 329 433 1.64E-35 T 13-09-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 PANTHER PTHR11564:SF7 1 439 2.9E-265 T 13-09-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 13-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 SMART SM00963 1 86 5.1E-35 T 13-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 SMART SM00382 99 301 5.4E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 432 1.1E-177 T 13-09-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 3.9E-74 T 13-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 PANTHER PTHR11564 1 439 2.9E-265 T 13-09-2016 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 Gene3D G3DSA:1.10.260.30 329 434 1.9E-38 T 13-09-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 SUPERFAMILY SSF52540 42 354 5.97E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 Gene3D G3DSA:3.40.50.300 95 297 8.3E-77 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04455 479ece2cf3e7f07128704e6d4c555301 458 Pfam PF02978 Signal peptide binding domain 329 430 9.4E-33 T 13-09-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PMA3_RS09505 e8dde7adbfb2202e40f4a460dc80347f 291 SUPERFAMILY SSF53697 105 268 1.06E-11 T 13-09-2016 PMA3_RS09505 e8dde7adbfb2202e40f4a460dc80347f 291 SUPERFAMILY SSF46689 4 80 5.73E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS09505 e8dde7adbfb2202e40f4a460dc80347f 291 Gene3D G3DSA:3.40.50.10490 105 270 2.1E-9 T 13-09-2016 PMA3_RS09505 e8dde7adbfb2202e40f4a460dc80347f 291 Pfam PF01380 SIS domain 131 255 6.4E-9 T 13-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PMA3_RS09505 e8dde7adbfb2202e40f4a460dc80347f 291 Gene3D G3DSA:1.10.10.10 4 78 3.9E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09505 e8dde7adbfb2202e40f4a460dc80347f 291 PANTHER PTHR30514:SF3 21 271 5.7E-14 T 13-09-2016 PMA3_RS09505 e8dde7adbfb2202e40f4a460dc80347f 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 76 7.9E-14 T 13-09-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PMA3_RS09505 e8dde7adbfb2202e40f4a460dc80347f 291 PANTHER PTHR30514 21 271 5.7E-14 T 13-09-2016 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 PANTHER PTHR11070:SF23 307 510 0.0 T 13-09-2016 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Gene3D G3DSA:1.10.486.10 607 751 2.7E-50 T 13-09-2016 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Gene3D G3DSA:1.10.3170.10 157 356 5.8E-54 T 13-09-2016 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Pfam PF13361 UvrD-like helicase C-terminal domain 706 840 2.7E-14 T 13-09-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Gene3D G3DSA:3.90.320.10 916 1215 2.2E-87 T 13-09-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Gene3D G3DSA:3.40.50.300 461 603 2.3E-61 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Gene3D G3DSA:3.40.50.300 752 890 2.3E-61 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 SUPERFAMILY SSF52540 9 79 6.14E-108 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 SUPERFAMILY SSF52540 332 506 6.14E-108 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 SUPERFAMILY SSF52540 821 847 6.14E-108 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 SUPERFAMILY SSF52540 120 204 6.14E-108 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 SUPERFAMILY SSF52540 540 790 6.14E-108 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 4 1212 14.934 T 13-09-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 PANTHER PTHR11070:SF23 535 798 0.0 T 13-09-2016 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 PANTHER PTHR11070:SF23 8 88 0.0 T 13-09-2016 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 PANTHER PTHR11070:SF23 820 1207 0.0 T 13-09-2016 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 PANTHER PTHR11070:SF23 120 218 0.0 T 13-09-2016 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1211 0.0 T 13-09-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 PANTHER PTHR11070 535 798 0.0 T 13-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 PANTHER PTHR11070 8 88 0.0 T 13-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 PANTHER PTHR11070 307 510 0.0 T 13-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 PANTHER PTHR11070 120 218 0.0 T 13-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 PANTHER PTHR11070 820 1207 0.0 T 13-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Pfam PF00580 UvrD/REP helicase N-terminal domain 335 445 3.4E-28 T 13-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 147 7.0E-26 T 13-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Gene3D G3DSA:3.40.50.300 122 152 7.3E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Gene3D G3DSA:3.40.50.300 12 81 7.3E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Gene3D G3DSA:3.40.50.300 358 460 7.3E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 SUPERFAMILY SSF52980 925 1213 7.51E-72 T 13-09-2016 IPR011335 Restriction endonuclease type II-like PMA3_RS25895 3557acc44930c16a65c3afa566550ea4 1229 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1066 1191 6.6E-7 T 13-09-2016 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 Gene3D G3DSA:1.10.1740.10 9 80 1.0E-9 T 13-09-2016 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 SUPERFAMILY SSF48452 22 53 1.62E-5 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 SUPERFAMILY SSF48452 318 401 1.62E-5 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 SUPERFAMILY SSF88659 103 166 1.7E-9 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 Pfam PF07719 Tetratricopeptide repeat 365 394 3.2E-5 T 13-09-2016 IPR013105 Tetratricopeptide repeat 2 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 Pfam PF04542 Sigma-70 region 2 14 80 2.7E-8 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 Gene3D G3DSA:1.10.10.10 105 166 1.2E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05480 3023161c952f2d1225271027014f5278 411 SUPERFAMILY SSF88946 10 85 3.26E-11 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 Gene3D G3DSA:1.25.40.10 362 399 3.2E-5 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 PANTHER PTHR30173 1 382 3.3E-201 T 13-09-2016 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 Pfam PF08281 Sigma-70, region 4 113 164 1.1E-6 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS05480 3023161c952f2d1225271027014f5278 411 PANTHER PTHR30173:SF7 1 382 3.3E-201 T 13-09-2016 PMA3_RS08545 31ef4851030e7e98d88a351d439249de 295 Gene3D G3DSA:3.30.70.100 184 267 1.7E-7 T 13-09-2016 PMA3_RS08545 31ef4851030e7e98d88a351d439249de 295 PANTHER PTHR30221 1 263 1.3E-120 T 13-09-2016 PMA3_RS08545 31ef4851030e7e98d88a351d439249de 295 SUPERFAMILY SSF50182 116 181 1.08E-14 T 13-09-2016 IPR010920 LSM domain PMA3_RS08545 31ef4851030e7e98d88a351d439249de 295 SUPERFAMILY SSF82861 30 113 4.58E-17 T 13-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PMA3_RS08545 31ef4851030e7e98d88a351d439249de 295 SUPERFAMILY SSF82689 182 267 9.81E-12 T 13-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PMA3_RS08545 31ef4851030e7e98d88a351d439249de 295 PANTHER PTHR30221:SF3 1 263 1.3E-120 T 13-09-2016 PMA3_RS08545 31ef4851030e7e98d88a351d439249de 295 Pfam PF00924 Mechanosensitive ion channel 75 266 1.2E-36 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS08545 31ef4851030e7e98d88a351d439249de 295 Gene3D G3DSA:2.30.30.60 131 180 1.4E-14 T 13-09-2016 PMA3_RS24900 1cfd2c06ba1d288e8198dbc0dce1ab75 123 Gene3D G3DSA:3.30.1130.10 7 122 8.8E-35 T 13-09-2016 PMA3_RS24900 1cfd2c06ba1d288e8198dbc0dce1ab75 123 PANTHER PTHR20941:SF6 1 123 2.0E-58 T 13-09-2016 PMA3_RS24900 1cfd2c06ba1d288e8198dbc0dce1ab75 123 Pfam PF02152 Dihydroneopterin aldolase 11 119 4.0E-25 T 13-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS24900 1cfd2c06ba1d288e8198dbc0dce1ab75 123 PANTHER PTHR20941 1 123 2.0E-58 T 13-09-2016 PMA3_RS24900 1cfd2c06ba1d288e8198dbc0dce1ab75 123 TIGRFAM TIGR00526 folB_dom: FolB domain 8 120 2.8E-30 T 13-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS24900 1cfd2c06ba1d288e8198dbc0dce1ab75 123 SUPERFAMILY SSF55620 7 122 7.31E-30 T 13-09-2016 PMA3_RS24900 1cfd2c06ba1d288e8198dbc0dce1ab75 123 SMART SM00905 11 121 3.0E-31 T 13-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS30260 041bd13b312589aa7ff83c640a06c379 458 SUPERFAMILY SSF63411 270 427 4.19E-18 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS30260 041bd13b312589aa7ff83c640a06c379 458 Pfam PF00675 Insulinase (Peptidase family M16) 46 150 3.3E-15 T 13-09-2016 IPR011765 Peptidase M16, N-terminal PMA3_RS30260 041bd13b312589aa7ff83c640a06c379 458 SUPERFAMILY SSF63411 20 227 5.76E-32 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS30260 041bd13b312589aa7ff83c640a06c379 458 Gene3D G3DSA:3.30.830.10 18 241 3.0E-36 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS30260 041bd13b312589aa7ff83c640a06c379 458 PANTHER PTHR11851:SF124 20 433 3.7E-41 T 13-09-2016 PMA3_RS30260 041bd13b312589aa7ff83c640a06c379 458 Gene3D G3DSA:3.30.830.10 294 416 2.5E-11 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS30260 041bd13b312589aa7ff83c640a06c379 458 PANTHER PTHR11851 20 433 3.7E-41 T 13-09-2016 PMA3_RS30260 041bd13b312589aa7ff83c640a06c379 458 Pfam PF05193 Peptidase M16 inactive domain 189 362 1.8E-17 T 13-09-2016 IPR007863 Peptidase M16, C-terminal PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 SUPERFAMILY SSF158472 191 239 5.23E-6 T 13-09-2016 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 SMART SM00388 264 329 1.4E-23 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 492 1.1E-25 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 327 1.2E-18 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 9.0E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 9.0E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 446 9.0E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 9.0E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 PANTHER PTHR24423 3 17 1.1E-148 T 13-09-2016 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 PANTHER PTHR24423 243 633 1.1E-148 T 13-09-2016 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 PANTHER PTHR24423 184 221 1.1E-148 T 13-09-2016 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 Pfam PF00072 Response regulator receiver domain 517 628 4.9E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 SUPERFAMILY SSF52172 513 633 3.98E-38 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 SMART SM00448 515 628 1.4E-36 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 Gene3D G3DSA:3.40.50.2300 513 632 4.6E-41 T 13-09-2016 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 Pfam PF00672 HAMP domain 171 238 4.4E-12 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 SUPERFAMILY SSF47384 250 329 4.71E-22 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 SMART SM00304 190 242 8.4E-7 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 SMART SM00387 377 493 3.6E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 Gene3D G3DSA:3.30.565.10 331 495 3.5E-45 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 36 102 6.2E-9 T 13-09-2016 IPR019247 Histidine kinase BarA, N-terminal PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 SUPERFAMILY SSF55874 318 493 4.19E-45 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05985 b30a11d57f671c3c31c6f6ae134caf9c 633 Gene3D G3DSA:1.10.287.130 256 325 8.9E-17 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13500 58f4b42b3bf545aacaadc925a0a3b0ba 300 SUPERFAMILY SSF52402 152 295 6.36E-20 T 13-09-2016 PMA3_RS13500 58f4b42b3bf545aacaadc925a0a3b0ba 300 SUPERFAMILY SSF52402 16 141 2.09E-16 T 13-09-2016 PMA3_RS13500 58f4b42b3bf545aacaadc925a0a3b0ba 300 Pfam PF00582 Universal stress protein family 179 294 9.7E-13 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS13500 58f4b42b3bf545aacaadc925a0a3b0ba 300 Pfam PF00582 Universal stress protein family 19 141 4.3E-9 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS13500 58f4b42b3bf545aacaadc925a0a3b0ba 300 Gene3D G3DSA:3.40.50.620 152 294 2.3E-21 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS13500 58f4b42b3bf545aacaadc925a0a3b0ba 300 Gene3D G3DSA:3.40.50.620 17 141 9.3E-16 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS18910 9bf3641e93ee3dc7ccbc16eb33a43472 571 PANTHER PTHR11895:SF8 317 561 1.1E-194 T 13-09-2016 PMA3_RS18910 9bf3641e93ee3dc7ccbc16eb33a43472 571 PANTHER PTHR11895:SF8 1 296 1.1E-194 T 13-09-2016 PMA3_RS18910 9bf3641e93ee3dc7ccbc16eb33a43472 571 Gene3D G3DSA:3.90.1300.10 2 564 9.2E-120 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS18910 9bf3641e93ee3dc7ccbc16eb33a43472 571 Pfam PF01425 Amidase 462 544 2.1E-7 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS18910 9bf3641e93ee3dc7ccbc16eb33a43472 571 Pfam PF01425 Amidase 25 291 7.2E-45 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS18910 9bf3641e93ee3dc7ccbc16eb33a43472 571 SUPERFAMILY SSF75304 1 561 1.57E-89 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS18910 9bf3641e93ee3dc7ccbc16eb33a43472 571 PANTHER PTHR11895 317 561 1.1E-194 T 13-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS18910 9bf3641e93ee3dc7ccbc16eb33a43472 571 PANTHER PTHR11895 1 296 1.1E-194 T 13-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS03835 ed45bd302c38f29f84ffcdb607350d12 340 TIGRFAM TIGR00109 hemH: ferrochelatase 3 195 9.1E-40 T 13-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PMA3_RS03835 ed45bd302c38f29f84ffcdb607350d12 340 PANTHER PTHR11108 224 329 2.8E-88 T 13-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PMA3_RS03835 ed45bd302c38f29f84ffcdb607350d12 340 PANTHER PTHR11108 5 202 2.8E-88 T 13-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PMA3_RS03835 ed45bd302c38f29f84ffcdb607350d12 340 Gene3D G3DSA:3.40.50.1400 4 190 1.3E-51 T 13-09-2016 PMA3_RS03835 ed45bd302c38f29f84ffcdb607350d12 340 Pfam PF00762 Ferrochelatase 4 335 4.6E-95 T 13-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PMA3_RS03835 ed45bd302c38f29f84ffcdb607350d12 340 SUPERFAMILY SSF53800 2 335 1.2E-84 T 13-09-2016 PMA3_RS03835 ed45bd302c38f29f84ffcdb607350d12 340 Gene3D G3DSA:3.40.50.1400 191 335 4.6E-30 T 13-09-2016 PMA3_RS03835 ed45bd302c38f29f84ffcdb607350d12 340 Hamap MF_00323 Ferrochelatase [hemH]. 2 337 33.877 T 13-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PMA3_RS14250 8b5a2793f14e28efc07569e36475e02f 471 PANTHER PTHR11785 10 450 5.6E-158 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS14250 8b5a2793f14e28efc07569e36475e02f 471 Pfam PF00324 Amino acid permease 22 436 2.2E-91 T 13-09-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PMA3_RS14250 8b5a2793f14e28efc07569e36475e02f 471 PANTHER PTHR11785:SF336 10 450 5.6E-158 T 13-09-2016 PMA3_RS14250 8b5a2793f14e28efc07569e36475e02f 471 PIRSF PIRSF006060 1 466 2.1E-61 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS25870 642937fa9fc48c01f2462682b19bbf2a 114 PANTHER PTHR33271 39 114 1.2E-20 T 13-09-2016 PMA3_RS25870 642937fa9fc48c01f2462682b19bbf2a 114 Pfam PF05899 Protein of unknown function (DUF861) 39 111 6.9E-23 T 13-09-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PMA3_RS25870 642937fa9fc48c01f2462682b19bbf2a 114 SUPERFAMILY SSF51182 7 113 2.31E-17 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS25870 642937fa9fc48c01f2462682b19bbf2a 114 Gene3D G3DSA:2.60.120.10 23 113 1.6E-30 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 Pfam PF01037 Lrp/AsnC ligand binding domain 68 134 3.7E-16 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 1.5E-10 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 1.5E-10 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 1.5E-10 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 Gene3D G3DSA:3.30.70.920 55 129 1.8E-18 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 PANTHER PTHR30154 3 144 5.9E-88 T 13-09-2016 PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 SUPERFAMILY SSF54909 64 137 2.15E-16 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 SUPERFAMILY SSF46785 2 62 2.7E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 Gene3D G3DSA:1.10.10.10 2 53 4.9E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 Pfam PF13404 AsnC-type helix-turn-helix domain 3 43 1.0E-11 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 SMART SM00344 2 108 1.1E-27 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS11990 d990199661e2bef07ade2070cb297555 146 PANTHER PTHR30154:SF14 3 144 5.9E-88 T 13-09-2016 PMA3_RS00225 89f0d79d89974a00a76c74c1dd348e1d 652 Pfam PF13387 Domain of unknown function (DUF4105) 272 440 1.1E-28 T 13-09-2016 IPR025178 Domain of unknown function DUF4105 PMA3_RS23070 03219a4e6898119a471fb6c77f8450a7 284 Gene3D G3DSA:2.70.98.10 17 279 9.7E-62 T 13-09-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PMA3_RS23070 03219a4e6898119a471fb6c77f8450a7 284 PANTHER PTHR11122:SF14 1 282 5.1E-63 T 13-09-2016 PMA3_RS23070 03219a4e6898119a471fb6c77f8450a7 284 PIRSF PIRSF016020 3 283 3.5E-54 T 13-09-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 PMA3_RS23070 03219a4e6898119a471fb6c77f8450a7 284 PANTHER PTHR11122 1 282 5.1E-63 T 13-09-2016 PMA3_RS23070 03219a4e6898119a471fb6c77f8450a7 284 SUPERFAMILY SSF74650 16 277 9.42E-62 T 13-09-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PMA3_RS23070 03219a4e6898119a471fb6c77f8450a7 284 Pfam PF01263 Aldose 1-epimerase 29 276 1.7E-25 T 13-09-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 SUPERFAMILY SSF55973 112 233 6.28E-50 T 13-09-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 102 3.0E-41 T 13-09-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 SUPERFAMILY SSF55973 234 395 2.83E-67 T 13-09-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 Gene3D G3DSA:3.30.300.10 245 394 8.8E-70 T 13-09-2016 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 365 3.4E-66 T 13-09-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 Gene3D G3DSA:3.30.300.10 135 234 2.3E-40 T 13-09-2016 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 13-09-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 SUPERFAMILY SSF55973 6 110 1.41E-45 T 13-09-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 1.0E-42 T 13-09-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 PIRSF PIRSF000497 1 395 1.1E-169 T 13-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 13-09-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 PANTHER PTHR11964 6 389 4.3E-260 T 13-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 Gene3D G3DSA:3.30.300.10 12 134 5.9E-47 T 13-09-2016 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 393 2.4E-184 T 13-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS28225 5ea83149ab0dc31c316a0f09009b5146 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 394 56.701 T 13-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PMA3_RS15390 2a97d842bd6b4f7b3f3a2ff2b846d3d2 255 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 168 255 4.9E-26 T 13-09-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PMA3_RS15390 2a97d842bd6b4f7b3f3a2ff2b846d3d2 255 Pfam PF00753 Metallo-beta-lactamase superfamily 14 167 9.7E-14 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15390 2a97d842bd6b4f7b3f3a2ff2b846d3d2 255 PANTHER PTHR11935:SF7 1 255 2.4E-88 T 13-09-2016 PMA3_RS15390 2a97d842bd6b4f7b3f3a2ff2b846d3d2 255 SUPERFAMILY SSF56281 3 255 4.47E-71 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15390 2a97d842bd6b4f7b3f3a2ff2b846d3d2 255 SMART SM00849 12 167 2.2E-36 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15390 2a97d842bd6b4f7b3f3a2ff2b846d3d2 255 PANTHER PTHR11935 1 255 2.4E-88 T 13-09-2016 PMA3_RS15390 2a97d842bd6b4f7b3f3a2ff2b846d3d2 255 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 255 43.433 T 13-09-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PMA3_RS15390 2a97d842bd6b4f7b3f3a2ff2b846d3d2 255 Gene3D G3DSA:3.60.15.10 8 255 3.7E-88 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15390 2a97d842bd6b4f7b3f3a2ff2b846d3d2 255 PIRSF PIRSF005457 1 255 4.6E-100 T 13-09-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PMA3_RS15390 2a97d842bd6b4f7b3f3a2ff2b846d3d2 255 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 255 1.5E-100 T 13-09-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PMA3_RS10820 2fc340eccdd9bf7a83361692fbdb6c5f 203 Gene3D G3DSA:3.40.30.10 1 76 5.8E-18 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS10820 2fc340eccdd9bf7a83361692fbdb6c5f 203 SUPERFAMILY SSF52833 1 85 7.78E-17 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS10820 2fc340eccdd9bf7a83361692fbdb6c5f 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 1.1E-20 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS10820 2fc340eccdd9bf7a83361692fbdb6c5f 203 PANTHER PTHR11260:SF325 1 201 2.1E-65 T 13-09-2016 PMA3_RS10820 2fc340eccdd9bf7a83361692fbdb6c5f 203 PANTHER PTHR11260 1 201 2.1E-65 T 13-09-2016 PMA3_RS15440 b09d3b31798324ee79d557b841e1fd07 193 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 43 192 1.8E-29 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS15440 b09d3b31798324ee79d557b841e1fd07 193 Gene3D G3DSA:3.30.70.270 46 192 7.6E-31 T 13-09-2016 PMA3_RS15440 b09d3b31798324ee79d557b841e1fd07 193 SUPERFAMILY SSF55073 49 192 1.1E-28 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS15440 b09d3b31798324ee79d557b841e1fd07 193 SMART SM00267 31 193 2.3E-15 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS15440 b09d3b31798324ee79d557b841e1fd07 193 Pfam PF00990 Diguanylate cyclase, GGDEF domain 45 192 1.7E-29 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS30305 48886b5aa2fd663db63336cb181881c7 54 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 21.494 T 13-09-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 PMA3_RS30305 48886b5aa2fd663db63336cb181881c7 54 PIRSF PIRSF036466 1 54 1.1E-23 T 13-09-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 PMA3_RS30305 48886b5aa2fd663db63336cb181881c7 54 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.9E-17 T 13-09-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.5E-40 T 13-09-2016 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.5E-40 T 13-09-2016 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 3.5E-40 T 13-09-2016 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 3.5E-40 T 13-09-2016 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.5E-40 T 13-09-2016 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 13-09-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 Gene3D G3DSA:3.50.50.60 120 234 1.4E-32 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 SUPERFAMILY SSF51905 2 312 7.53E-55 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PANTHER PTHR22912:SF48 1 319 2.2E-157 T 13-09-2016 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 Gene3D G3DSA:3.50.50.60 5 119 1.7E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PANTHER PTHR22912 1 319 2.2E-157 T 13-09-2016 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 4.2E-77 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.2E-77 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.2E-77 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.2E-77 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.2E-77 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.2E-77 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 4.2E-77 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.2E-77 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.2E-77 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.1E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 312 8.4E-118 T 13-09-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 PMA3_RS24935 7f696953778b1a773da13fa6b9ffca71 320 Gene3D G3DSA:3.50.50.60 235 315 8.0E-10 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16200 f51634e97155cb0479befad707c33918 434 Pfam PF07690 Major Facilitator Superfamily 17 366 5.0E-42 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS16200 f51634e97155cb0479befad707c33918 434 Gene3D G3DSA:1.20.1250.20 199 401 3.4E-26 T 13-09-2016 PMA3_RS16200 f51634e97155cb0479befad707c33918 434 PANTHER PTHR23515 7 399 1.2E-70 T 13-09-2016 PMA3_RS16200 f51634e97155cb0479befad707c33918 434 Gene3D G3DSA:1.20.1250.20 11 190 8.4E-25 T 13-09-2016 PMA3_RS16200 f51634e97155cb0479befad707c33918 434 PANTHER PTHR23515:SF2 7 399 1.2E-70 T 13-09-2016 PMA3_RS16200 f51634e97155cb0479befad707c33918 434 SUPERFAMILY SSF103473 4 400 1.44E-61 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 Gene3D G3DSA:1.10.287.130 216 280 1.4E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 SMART SM00304 173 225 4.9E-4 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 431 6.7E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 PANTHER PTHR24423:SF559 167 431 1.3E-67 T 13-09-2016 PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 Gene3D G3DSA:3.30.565.10 288 432 1.1E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 PANTHER PTHR24423 167 431 1.3E-67 T 13-09-2016 PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 SMART SM00387 324 434 2.3E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 SUPERFAMILY SSF47384 210 280 5.3E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 Pfam PF00672 HAMP domain 156 221 8.4E-10 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 SUPERFAMILY SSF55874 288 431 1.83E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 2.3E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 2.3E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 2.3E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS17375 fc01dbf2b7f114338155ce4c42a1a8ec 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 2.3E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS18190 86ef9d02ece23ea17dabb483ba3db19a 330 SUPERFAMILY SSF53822 59 328 6.39E-80 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS18190 86ef9d02ece23ea17dabb483ba3db19a 330 Gene3D G3DSA:3.40.50.2300 165 327 2.0E-60 T 13-09-2016 PMA3_RS18190 86ef9d02ece23ea17dabb483ba3db19a 330 Gene3D G3DSA:3.40.50.2300 58 164 9.5E-35 T 13-09-2016 PMA3_RS18190 86ef9d02ece23ea17dabb483ba3db19a 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 7.8E-15 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS18190 86ef9d02ece23ea17dabb483ba3db19a 330 Pfam PF13377 Periplasmic binding protein-like domain 166 326 1.4E-39 T 13-09-2016 PMA3_RS18190 86ef9d02ece23ea17dabb483ba3db19a 330 SMART SM00354 1 68 1.5E-22 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS18190 86ef9d02ece23ea17dabb483ba3db19a 330 Gene3D G3DSA:1.10.260.40 1 57 1.2E-19 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS18190 86ef9d02ece23ea17dabb483ba3db19a 330 SUPERFAMILY SSF47413 1 56 1.58E-14 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS18190 86ef9d02ece23ea17dabb483ba3db19a 330 PANTHER PTHR30146 1 330 6.7E-114 T 13-09-2016 PMA3_RS18190 86ef9d02ece23ea17dabb483ba3db19a 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS20765 85c1103d97340c048c4e6aaf9f4fff3a 265 SUPERFAMILY SSF54637 2 109 6.27E-26 T 13-09-2016 IPR029069 HotDog domain PMA3_RS20765 85c1103d97340c048c4e6aaf9f4fff3a 265 PANTHER PTHR11066 15 255 3.3E-25 T 13-09-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 PMA3_RS20765 85c1103d97340c048c4e6aaf9f4fff3a 265 Pfam PF13622 Thioesterase-like superfamily 20 262 2.2E-48 T 13-09-2016 PMA3_RS20765 85c1103d97340c048c4e6aaf9f4fff3a 265 Gene3D G3DSA:3.10.129.10 2 108 1.4E-22 T 13-09-2016 IPR029069 HotDog domain PMA3_RS20765 85c1103d97340c048c4e6aaf9f4fff3a 265 SUPERFAMILY SSF54637 120 263 8.71E-25 T 13-09-2016 IPR029069 HotDog domain PMA3_RS20765 85c1103d97340c048c4e6aaf9f4fff3a 265 Gene3D G3DSA:3.10.129.10 137 259 2.0E-9 T 13-09-2016 IPR029069 HotDog domain PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.1E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 5.1E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 5.1E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 5.1E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.1E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 PANTHER PTHR24322 13 143 8.3E-58 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 SUPERFAMILY SSF51735 8 262 2.35E-62 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 262 1.5E-41 T 13-09-2016 PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 PANTHER PTHR24322:SF602 159 190 8.3E-58 T 13-09-2016 PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 PANTHER PTHR24322:SF602 13 143 8.3E-58 T 13-09-2016 PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 Gene3D G3DSA:3.40.50.720 4 262 2.6E-65 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18860 342d076c6308a0dca9887bed2a0379ae 265 PANTHER PTHR24322 159 190 8.3E-58 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 Gene3D G3DSA:3.40.190.10 177 260 7.2E-24 T 13-09-2016 PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.3E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.3E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.3E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 PANTHER PTHR30427:SF1 1 288 2.8E-84 T 13-09-2016 PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 Gene3D G3DSA:1.10.10.10 1 86 3.7E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 Pfam PF03466 LysR substrate binding domain 89 288 1.5E-41 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 Gene3D G3DSA:3.40.190.10 90 176 2.6E-19 T 13-09-2016 PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.7E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 PANTHER PTHR30427 1 288 2.8E-84 T 13-09-2016 PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 SUPERFAMILY SSF53850 90 293 3.72E-40 T 13-09-2016 PMA3_RS17940 fed1b3f8eadd408754f874328c6fb897 298 SUPERFAMILY SSF46785 1 86 1.16E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15720 0746a1cdd8456d8e19c63b64e83dcf58 243 TIGRFAM TIGR03864 PQQ_ABC_ATP: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system 3 237 7.1E-106 T 13-09-2016 IPR022467 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system PMA3_RS15720 0746a1cdd8456d8e19c63b64e83dcf58 243 SUPERFAMILY SSF52540 4 221 9.92E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15720 0746a1cdd8456d8e19c63b64e83dcf58 243 SMART SM00382 28 211 1.0E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS15720 0746a1cdd8456d8e19c63b64e83dcf58 243 Pfam PF00005 ABC transporter 19 162 3.5E-29 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS15720 0746a1cdd8456d8e19c63b64e83dcf58 243 Gene3D G3DSA:3.40.50.300 3 223 5.0E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15720 0746a1cdd8456d8e19c63b64e83dcf58 243 PANTHER PTHR24220 5 221 1.8E-67 T 13-09-2016 PMA3_RS28400 34b5ef1f54e8c9a84cca16476c55d783 971 SMART SM00073 679 782 5.4E-5 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28400 34b5ef1f54e8c9a84cca16476c55d783 971 SUPERFAMILY SSF47226 7 130 9.42E-22 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28400 34b5ef1f54e8c9a84cca16476c55d783 971 SUPERFAMILY SSF47226 820 942 1.44E-15 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28400 34b5ef1f54e8c9a84cca16476c55d783 971 SUPERFAMILY SSF47226 679 801 1.01E-18 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28400 34b5ef1f54e8c9a84cca16476c55d783 971 Pfam PF01627 Hpt domain 682 766 2.3E-12 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28400 34b5ef1f54e8c9a84cca16476c55d783 971 Pfam PF01627 Hpt domain 10 98 4.8E-7 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28400 34b5ef1f54e8c9a84cca16476c55d783 971 SUPERFAMILY SSF47226 432 556 8.54E-15 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28400 34b5ef1f54e8c9a84cca16476c55d783 971 Gene3D G3DSA:1.20.120.160 819 947 2.5E-15 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28400 34b5ef1f54e8c9a84cca16476c55d783 971 Gene3D G3DSA:1.20.120.160 679 811 1.7E-18 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28400 34b5ef1f54e8c9a84cca16476c55d783 971 Gene3D G3DSA:1.20.120.160 10 139 1.1E-15 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS13870 6c73bb28c53c6fb453d2de5adb301926 308 SUPERFAMILY SSF144020 18 306 5.75E-85 T 13-09-2016 IPR024064 FdhE-like PMA3_RS13870 6c73bb28c53c6fb453d2de5adb301926 308 Pfam PF04216 Protein involved in formate dehydrogenase formation 16 303 8.1E-90 T 13-09-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PMA3_RS13870 6c73bb28c53c6fb453d2de5adb301926 308 PIRSF PIRSF018296 1 308 2.5E-103 T 13-09-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PMA3_RS13870 6c73bb28c53c6fb453d2de5adb301926 308 PANTHER PTHR37689:SF1 1 308 2.0E-82 T 13-09-2016 PMA3_RS13870 6c73bb28c53c6fb453d2de5adb301926 308 Hamap MF_00611 Protein FdhE [fdhE]. 2 306 38.026 T 13-09-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PMA3_RS13870 6c73bb28c53c6fb453d2de5adb301926 308 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 3 305 2.2E-110 T 13-09-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PMA3_RS13870 6c73bb28c53c6fb453d2de5adb301926 308 Gene3D G3DSA:3.90.1670.10 19 306 1.5E-83 T 13-09-2016 IPR024064 FdhE-like PMA3_RS13870 6c73bb28c53c6fb453d2de5adb301926 308 PANTHER PTHR37689 1 308 2.0E-82 T 13-09-2016 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 Pfam PF13247 4Fe-4S dicluster domain 88 184 4.7E-25 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 Gene3D G3DSA:3.30.70.20 28 44 8.1E-13 T 13-09-2016 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 Gene3D G3DSA:3.30.70.20 78 107 8.1E-13 T 13-09-2016 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 Pfam PF09163 Formate dehydrogenase N, transmembrane 242 284 5.4E-21 T 13-09-2016 IPR015246 Formate dehydrogenase, transmembrane PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 Gene3D G3DSA:1.20.5.480 248 284 3.2E-18 T 13-09-2016 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 PIRSF PIRSF036298 1 304 1.0E-153 T 13-09-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 Gene3D G3DSA:3.30.70.20 108 148 3.8E-21 T 13-09-2016 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 PANTHER PTHR11938 1 201 3.5E-105 T 13-09-2016 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 5 283 7.7E-139 T 13-09-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 SUPERFAMILY SSF81597 242 284 2.22E-13 T 13-09-2016 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 SUPERFAMILY SSF54862 23 254 7.53E-72 T 13-09-2016 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 Gene3D G3DSA:3.30.70.20 149 247 4.3E-28 T 13-09-2016 PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 129 140 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS13860 fcd277e97e7f01317c577377dd3384e4 311 PANTHER PTHR11938:SF84 1 201 3.5E-105 T 13-09-2016 PMA3_RS03590 a2f18b7e3c380090cbd142824941af0f 338 Gene3D G3DSA:3.50.50.60 3 40 8.1E-6 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03590 a2f18b7e3c380090cbd142824941af0f 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 4.6E-61 T 13-09-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS03590 a2f18b7e3c380090cbd142824941af0f 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 44.44 T 13-09-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS03590 a2f18b7e3c380090cbd142824941af0f 338 SUPERFAMILY SSF51735 1 182 2.03E-74 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03590 a2f18b7e3c380090cbd142824941af0f 338 SUPERFAMILY SSF48179 183 332 1.6E-67 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS03590 a2f18b7e3c380090cbd142824941af0f 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 7.2E-74 T 13-09-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS03590 a2f18b7e3c380090cbd142824941af0f 338 PANTHER PTHR21371 1 337 4.5E-190 T 13-09-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS03590 a2f18b7e3c380090cbd142824941af0f 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 5.1E-129 T 13-09-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS03590 a2f18b7e3c380090cbd142824941af0f 338 Gene3D G3DSA:1.10.1040.10 41 325 9.4E-113 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS24750 727467869db9e5d5fbb0daf00d99d90d 328 Pfam PF16344 Domain of unknown function (DUF4974) 228 313 5.3E-10 T 13-09-2016 IPR032508 Protein FecR, C-terminal PMA3_RS24750 727467869db9e5d5fbb0daf00d99d90d 328 PANTHER PTHR30273 6 327 5.0E-68 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS24750 727467869db9e5d5fbb0daf00d99d90d 328 Pfam PF04773 FecR protein 125 215 1.7E-18 T 13-09-2016 IPR006860 FecR protein PMA3_RS24750 727467869db9e5d5fbb0daf00d99d90d 328 PANTHER PTHR30273:SF2 6 327 5.0E-68 T 13-09-2016 PMA3_RS24750 727467869db9e5d5fbb0daf00d99d90d 328 PIRSF PIRSF018266 6 328 3.7E-80 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS24750 727467869db9e5d5fbb0daf00d99d90d 328 Pfam PF16220 Domain of unknown function (DUF4880) 15 54 6.0E-12 T 13-09-2016 IPR032623 FecR, N-terminal PMA3_RS21865 2f4ef5e4dfa23e002e2d9567a7dc0868 260 PANTHER PTHR10204:SF45 1 187 7.5E-46 T 13-09-2016 PMA3_RS21865 2f4ef5e4dfa23e002e2d9567a7dc0868 260 SUPERFAMILY SSF52218 1 229 9.58E-52 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS21865 2f4ef5e4dfa23e002e2d9567a7dc0868 260 Pfam PF02525 Flavodoxin-like fold 1 201 1.8E-43 T 13-09-2016 IPR003680 Flavodoxin-like fold PMA3_RS21865 2f4ef5e4dfa23e002e2d9567a7dc0868 260 PANTHER PTHR10204 1 187 7.5E-46 T 13-09-2016 PMA3_RS21865 2f4ef5e4dfa23e002e2d9567a7dc0868 260 Gene3D G3DSA:3.40.50.360 1 226 2.7E-53 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS27085 1e3cd1969125d3e620af2612ced83935 232 Pfam PF04012 PspA/IM30 family 4 230 7.2E-41 T 13-09-2016 IPR007157 PspA/IM30 PMA3_RS27085 1e3cd1969125d3e620af2612ced83935 232 PANTHER PTHR31088:SF0 4 232 1.8E-43 T 13-09-2016 PMA3_RS27085 1e3cd1969125d3e620af2612ced83935 232 PANTHER PTHR31088 4 232 1.8E-43 T 13-09-2016 PMA3_RS13435 a8df996d8974d4361bf10bd810b9df7d 125 Pfam PF00072 Response regulator receiver domain 9 118 1.4E-16 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13435 a8df996d8974d4361bf10bd810b9df7d 125 SUPERFAMILY SSF52172 9 124 2.85E-24 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS13435 a8df996d8974d4361bf10bd810b9df7d 125 Gene3D G3DSA:3.40.50.2300 8 124 1.2E-28 T 13-09-2016 PMA3_RS13435 a8df996d8974d4361bf10bd810b9df7d 125 PANTHER PTHR24423 5 124 2.2E-22 T 13-09-2016 PMA3_RS13435 a8df996d8974d4361bf10bd810b9df7d 125 PANTHER PTHR24423:SF544 5 124 2.2E-22 T 13-09-2016 PMA3_RS13435 a8df996d8974d4361bf10bd810b9df7d 125 SMART SM00448 7 120 3.1E-12 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS24800 2ca983b5b8c600964c7560ffbf4201a6 166 PANTHER PTHR37819 10 149 5.4E-38 T 13-09-2016 PMA3_RS24800 2ca983b5b8c600964c7560ffbf4201a6 166 PANTHER PTHR37819:SF1 10 149 5.4E-38 T 13-09-2016 PMA3_RS24800 2ca983b5b8c600964c7560ffbf4201a6 166 PIRSF PIRSF029598 2 145 4.3E-43 T 13-09-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 PMA3_RS24800 2ca983b5b8c600964c7560ffbf4201a6 166 Pfam PF06146 Phosphate-starvation-inducible E 59 126 6.1E-18 T 13-09-2016 IPR020948 Phosphate-starvation-induced PsiE-like PMA3_RS29455 5ef7fab19c3c799dba6b22467f5fa399 381 Gene3D G3DSA:1.20.1250.20 201 368 2.0E-15 T 13-09-2016 PMA3_RS29455 5ef7fab19c3c799dba6b22467f5fa399 381 Gene3D G3DSA:1.20.1250.20 5 172 1.6E-17 T 13-09-2016 PMA3_RS29455 5ef7fab19c3c799dba6b22467f5fa399 381 SUPERFAMILY SSF103473 2 368 9.29E-37 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS29455 5ef7fab19c3c799dba6b22467f5fa399 381 Pfam PF07690 Major Facilitator Superfamily 203 367 1.0E-13 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS29455 5ef7fab19c3c799dba6b22467f5fa399 381 PANTHER PTHR23521 1 368 3.2E-91 T 13-09-2016 PMA3_RS29455 5ef7fab19c3c799dba6b22467f5fa399 381 PANTHER PTHR23521:SF2 1 368 3.2E-91 T 13-09-2016 PMA3_RS27185 7445383df5c6131343a79e1a5712433c 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 116 3.3E-41 T 13-09-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27185 7445383df5c6131343a79e1a5712433c 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 26.584 T 13-09-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27185 7445383df5c6131343a79e1a5712433c 116 Gene3D G3DSA:3.30.420.100 24 116 1.3E-38 T 13-09-2016 PMA3_RS27185 7445383df5c6131343a79e1a5712433c 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 1.2E-41 T 13-09-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27185 7445383df5c6131343a79e1a5712433c 116 PANTHER PTHR12899 3 116 2.0E-38 T 13-09-2016 PMA3_RS27185 7445383df5c6131343a79e1a5712433c 116 SUPERFAMILY SSF53137 4 114 1.02E-49 T 13-09-2016 PMA3_RS21215 1f9bd0125287b916ddaffe90393cd523 158 PANTHER PTHR12418 12 152 5.6E-39 T 13-09-2016 PMA3_RS21215 1f9bd0125287b916ddaffe90393cd523 158 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 114 1.3E-11 T 13-09-2016 IPR003736 Phenylacetic acid degradation-related domain PMA3_RS21215 1f9bd0125287b916ddaffe90393cd523 158 PANTHER PTHR12418:SF28 12 152 5.6E-39 T 13-09-2016 PMA3_RS21215 1f9bd0125287b916ddaffe90393cd523 158 Pfam PF03061 Thioesterase superfamily 52 125 2.6E-9 T 13-09-2016 IPR006683 Thioesterase domain PMA3_RS21215 1f9bd0125287b916ddaffe90393cd523 158 SUPERFAMILY SSF54637 3 139 6.77E-25 T 13-09-2016 IPR029069 HotDog domain PMA3_RS21215 1f9bd0125287b916ddaffe90393cd523 158 Gene3D G3DSA:3.10.129.10 9 141 1.0E-25 T 13-09-2016 IPR029069 HotDog domain PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 378 4.2E-33 T 13-09-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 164 180 - T 13-09-2016 IPR018201 Beta-ketoacyl synthase, active site PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 PIRSF PIRSF000447 1 424 1.0E-161 T 13-09-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 SMART SM00825 Beta-ketoacyl synthase 6 424 3.3E-15 T 13-09-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 257 6.0E-57 T 13-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 Gene3D G3DSA:3.40.47.10 2 270 2.1E-74 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 Gene3D G3DSA:3.40.47.10 274 423 1.3E-55 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 420 1.0E-163 T 13-09-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 SUPERFAMILY SSF53901 225 422 2.13E-64 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 PANTHER PTHR11712 1 422 1.7E-176 T 13-09-2016 PMA3_RS20835 20f55ae7813e72a3f532bd0ed9293e00 424 SUPERFAMILY SSF53901 3 262 1.02E-71 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 Gene3D G3DSA:1.10.150.310 497 628 3.6E-45 T 13-09-2016 IPR023097 Tex RuvX-like domain PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 SUPERFAMILY SSF50249 636 723 2.69E-25 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 Pfam PF12836 Helix-hairpin-helix motif 489 553 2.2E-27 T 13-09-2016 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 Pfam PF09371 Tex-like protein N-terminal domain 8 191 2.2E-66 T 13-09-2016 IPR018974 Tex-like protein, N-terminal PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 SMART SM00732 323 422 4.1E-38 T 13-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 Gene3D G3DSA:1.10.10.650 2 108 3.3E-46 T 13-09-2016 IPR023319 Tex-like protein, HTH domain PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 SUPERFAMILY SSF53098 319 467 1.97E-54 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 Pfam PF00575 S1 RNA binding domain 647 718 1.0E-18 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 Gene3D G3DSA:1.10.3500.10 449 496 6.9E-100 T 13-09-2016 IPR023323 Tex-like domain PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 Gene3D G3DSA:1.10.3500.10 109 319 6.9E-100 T 13-09-2016 IPR023323 Tex-like domain PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 Pfam PF16921 Tex protein YqgF-like domain 324 449 2.8E-54 T 13-09-2016 IPR032639 Tex protein, YqgF-like domain PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 PANTHER PTHR10724:SF1 1 744 0.0 T 13-09-2016 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 SUPERFAMILY SSF47781 558 630 1.78E-20 T 13-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 Gene3D G3DSA:3.30.420.140 324 448 2.0E-54 T 13-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 SUPERFAMILY SSF47781 468 554 2.89E-26 T 13-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 SMART SM00316 647 718 1.9E-24 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 SUPERFAMILY SSF158832 3 318 5.23E-117 T 13-09-2016 PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 Gene3D G3DSA:2.40.50.140 632 720 9.5E-29 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS00790 e1974261503275f3181ddc93ebeccfff 774 PANTHER PTHR10724 1 744 0.0 T 13-09-2016 PMA3_RS00670 2073acd39bd01596e846a0dea23fd8db 352 Gene3D G3DSA:3.40.47.10 207 345 1.2E-23 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS00670 2073acd39bd01596e846a0dea23fd8db 352 PIRSF PIRSF000451 1 348 9.5E-103 T 13-09-2016 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 PMA3_RS00670 2073acd39bd01596e846a0dea23fd8db 352 Pfam PF08392 FAE1/Type III polyketide synthase-like protein 13 188 1.3E-16 T 13-09-2016 IPR013601 FAE1/Type III polyketide synthase-like protein GO:0006633|GO:0016020|GO:0016747 KEGG: 00062+2.3.1.199|KEGG: 00650+2.3.1.19|MetaCyc: PWY-5080|MetaCyc: PWY-5972|MetaCyc: PWY-6433|MetaCyc: PWY-6598|MetaCyc: PWY-7036|MetaCyc: PWY-7601|MetaCyc: PWY-7602|MetaCyc: PWY-7619|MetaCyc: PWY-7724|MetaCyc: PWY-7725|UniPathway: UPA00094 PMA3_RS00670 2073acd39bd01596e846a0dea23fd8db 352 SUPERFAMILY SSF53901 206 345 8.9E-25 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS00670 2073acd39bd01596e846a0dea23fd8db 352 PANTHER PTHR11877 38 346 1.6E-64 T 13-09-2016 PMA3_RS00670 2073acd39bd01596e846a0dea23fd8db 352 Gene3D G3DSA:3.40.47.10 4 199 4.7E-53 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS00670 2073acd39bd01596e846a0dea23fd8db 352 PANTHER PTHR11877:SF10 38 346 1.6E-64 T 13-09-2016 PMA3_RS00670 2073acd39bd01596e846a0dea23fd8db 352 SUPERFAMILY SSF53901 7 202 7.2E-45 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS00670 2073acd39bd01596e846a0dea23fd8db 352 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 213 342 2.7E-15 T 13-09-2016 IPR012328 Chalcone/stilbene synthase, C-terminal PMA3_RS19085 19e1906366317436a61c802e7cbe1c1e 389 Gene3D G3DSA:3.40.640.10 44 268 2.3E-47 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS19085 19e1906366317436a61c802e7cbe1c1e 389 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 22 376 1.1E-148 T 13-09-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PMA3_RS19085 19e1906366317436a61c802e7cbe1c1e 389 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 385 180.587 T 13-09-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PMA3_RS19085 19e1906366317436a61c802e7cbe1c1e 389 PANTHER PTHR21152 19 386 6.6E-125 T 13-09-2016 PMA3_RS19085 19e1906366317436a61c802e7cbe1c1e 389 Gene3D G3DSA:3.90.1150.10 269 374 1.5E-41 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS19085 19e1906366317436a61c802e7cbe1c1e 389 PANTHER PTHR21152:SF21 19 386 6.6E-125 T 13-09-2016 PMA3_RS19085 19e1906366317436a61c802e7cbe1c1e 389 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 21 378 1.5E-149 T 13-09-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PMA3_RS19085 19e1906366317436a61c802e7cbe1c1e 389 SUPERFAMILY SSF53383 20 378 5.19E-83 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS19085 19e1906366317436a61c802e7cbe1c1e 389 PIRSF PIRSF000524 15 389 9.3E-54 T 13-09-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PMA3_RS19085 19e1906366317436a61c802e7cbe1c1e 389 Pfam PF00266 Aminotransferase class-V 49 310 8.0E-23 T 13-09-2016 IPR000192 Aminotransferase class V domain PMA3_RS11775 a945140ab8f8005eaeb574866001f720 410 SUPERFAMILY SSF51395 10 268 1.68E-87 T 13-09-2016 PMA3_RS11775 a945140ab8f8005eaeb574866001f720 410 SUPERFAMILY SSF51395 302 393 1.68E-87 T 13-09-2016 PMA3_RS11775 a945140ab8f8005eaeb574866001f720 410 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 368 2.5E-57 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS11775 a945140ab8f8005eaeb574866001f720 410 PANTHER PTHR22893 10 272 1.4E-108 T 13-09-2016 PMA3_RS11775 a945140ab8f8005eaeb574866001f720 410 PANTHER PTHR22893 299 394 1.4E-108 T 13-09-2016 PMA3_RS11775 a945140ab8f8005eaeb574866001f720 410 PANTHER PTHR22893:SF53 299 394 1.4E-108 T 13-09-2016 PMA3_RS11775 a945140ab8f8005eaeb574866001f720 410 PANTHER PTHR22893:SF53 10 272 1.4E-108 T 13-09-2016 PMA3_RS11775 a945140ab8f8005eaeb574866001f720 410 Gene3D G3DSA:3.20.20.70 10 393 4.0E-95 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 Pfam PF04408 Helicase associated domain (HA2) 474 556 1.5E-18 T 13-09-2016 IPR007502 Helicase-associated domain GO:0004386 PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 PANTHER PTHR18934:SF109 740 868 0.0 T 13-09-2016 PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 600 700 3.9E-20 T 13-09-2016 IPR011709 Domain of unknown function DUF1605 PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 Gene3D G3DSA:3.40.50.300 71 228 2.1E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 12 1300 0.0 T 13-09-2016 IPR010222 RNA helicase HrpA GO:0004004 PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 SUPERFAMILY SSF52540 74 591 1.17E-102 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 SMART SM00382 87 391 5.0E-5 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 Gene3D G3DSA:3.40.50.300 293 423 2.6E-12 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 SMART SM00490 311 411 3.9E-15 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 PANTHER PTHR18934:SF109 71 705 0.0 T 13-09-2016 PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 Pfam PF00271 Helicase conserved C-terminal domain 287 410 1.5E-11 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 PANTHER PTHR18934 71 705 0.0 T 13-09-2016 PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 SMART SM00847 471 561 1.9E-34 T 13-09-2016 IPR007502 Helicase-associated domain GO:0004386 PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 PANTHER PTHR18934 740 868 0.0 T 13-09-2016 PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 SMART SM00487 69 254 3.8E-27 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS22185 b31459503f32f76c80e7f5edc0bb9cfd 1303 Pfam PF11898 Domain of unknown function (DUF3418) 713 1300 3.0E-197 T 13-09-2016 IPR024590 RNA helicase HrpA, C-terminal PMA3_RS07420 acba97ab68771e7c4d4b9e4a04840d2f 295 PANTHER PTHR22911 15 284 4.9E-91 T 13-09-2016 PMA3_RS07420 acba97ab68771e7c4d4b9e4a04840d2f 295 Pfam PF00892 EamA-like transporter family 150 279 1.6E-15 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS07420 acba97ab68771e7c4d4b9e4a04840d2f 295 PANTHER PTHR22911:SF37 15 284 4.9E-91 T 13-09-2016 PMA3_RS07420 acba97ab68771e7c4d4b9e4a04840d2f 295 SUPERFAMILY SSF103481 207 280 8.5E-10 T 13-09-2016 PMA3_RS23415 6208678460bc0c2cc61b8c04faacaa0d 325 PANTHER PTHR35337 19 319 1.7E-40 T 13-09-2016 PMA3_RS23415 6208678460bc0c2cc61b8c04faacaa0d 325 Pfam PF01944 Stage II sporulation protein M 109 289 8.9E-34 T 13-09-2016 IPR002798 Stage II sporulation protein M-like PMA3_RS10635 56799c6781bcba5b84adf68297e91b1c 342 PANTHER PTHR11019 208 342 9.8E-21 T 13-09-2016 PMA3_RS10635 56799c6781bcba5b84adf68297e91b1c 342 SUPERFAMILY SSF46689 234 284 1.79E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10635 56799c6781bcba5b84adf68297e91b1c 342 Pfam PF14525 AraC-binding-like domain 31 210 9.4E-31 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS10635 56799c6781bcba5b84adf68297e91b1c 342 SMART SM00342 249 337 1.6E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10635 56799c6781bcba5b84adf68297e91b1c 342 Pfam PF12833 Helix-turn-helix domain 257 339 1.9E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10635 56799c6781bcba5b84adf68297e91b1c 342 Gene3D G3DSA:1.10.10.60 288 335 2.3E-4 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10635 56799c6781bcba5b84adf68297e91b1c 342 Gene3D G3DSA:1.10.10.60 235 287 1.1E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10635 56799c6781bcba5b84adf68297e91b1c 342 PANTHER PTHR11019:SF54 208 342 9.8E-21 T 13-09-2016 PMA3_RS08025 5ceedfa29ee5f9f251c4c635a2db79a5 303 PANTHER PTHR12715:SF4 13 296 5.7E-54 T 13-09-2016 PMA3_RS08025 5ceedfa29ee5f9f251c4c635a2db79a5 303 SUPERFAMILY SSF103481 47 148 1.96E-14 T 13-09-2016 PMA3_RS08025 5ceedfa29ee5f9f251c4c635a2db79a5 303 SUPERFAMILY SSF103481 191 293 9.68E-10 T 13-09-2016 PMA3_RS08025 5ceedfa29ee5f9f251c4c635a2db79a5 303 Pfam PF00892 EamA-like transporter family 160 290 1.4E-17 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS08025 5ceedfa29ee5f9f251c4c635a2db79a5 303 Pfam PF00892 EamA-like transporter family 15 145 2.1E-20 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS08025 5ceedfa29ee5f9f251c4c635a2db79a5 303 PANTHER PTHR12715 13 296 5.7E-54 T 13-09-2016 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 Gene3D G3DSA:3.30.9.10 269 353 1.5E-12 T 13-09-2016 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 Gene3D G3DSA:3.30.9.10 136 193 1.5E-12 T 13-09-2016 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 PANTHER PTHR13847:SF148 1 63 2.3E-240 T 13-09-2016 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 SUPERFAMILY SSF54373 270 360 2.75E-18 T 13-09-2016 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.744 T 13-09-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 PANTHER PTHR13847:SF148 107 422 2.3E-240 T 13-09-2016 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 SUPERFAMILY SSF51905 1 54 4.14E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 SUPERFAMILY SSF51905 360 417 4.14E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 SUPERFAMILY SSF51905 107 270 4.14E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 Pfam PF01266 FAD dependent oxidoreductase 3 398 2.2E-65 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 PANTHER PTHR13847 1 63 2.3E-240 T 13-09-2016 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 PANTHER PTHR13847 107 422 2.3E-240 T 13-09-2016 PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 Gene3D G3DSA:3.40.50.720 354 416 8.8E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 Gene3D G3DSA:3.40.50.720 194 268 8.8E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS29420 2a68f62ef1c9174305729f44da738f74 434 Gene3D G3DSA:3.40.50.720 1 96 8.8E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS29630 6747be1124bdd127788cb38e196b7acb 205 Pfam PF08887 GAD-like domain 3 108 3.8E-46 T 13-09-2016 IPR014983 GAD-related PMA3_RS29630 6747be1124bdd127788cb38e196b7acb 205 Pfam PF08906 Domain of unknown function (DUF1851) 127 195 1.9E-20 T 13-09-2016 IPR015002 Domain of unknown function DUF1851 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 Gene3D G3DSA:1.25.40.10 153 413 5.1E-23 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 Gene3D G3DSA:1.25.40.10 18 127 5.7E-10 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 PANTHER PTHR11102:SF11 16 147 6.5E-33 T 13-09-2016 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 SUPERFAMILY SSF81901 23 127 2.62E-6 T 13-09-2016 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 SUPERFAMILY SSF81901 233 420 6.08E-17 T 13-09-2016 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 PANTHER PTHR11102 235 250 6.5E-33 T 13-09-2016 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 PANTHER PTHR11102:SF11 235 250 6.5E-33 T 13-09-2016 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 PANTHER PTHR11102 274 434 6.5E-33 T 13-09-2016 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 PANTHER PTHR11102 16 147 6.5E-33 T 13-09-2016 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 PANTHER PTHR11102:SF11 274 434 6.5E-33 T 13-09-2016 PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 SMART SM00671 78 114 48.0 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 SMART SM00671 292 326 0.22 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 SMART SM00671 363 397 19.0 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 SMART SM00671 327 362 0.0075 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 Pfam PF08238 Sel1 repeat 367 393 39.0 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 Pfam PF08238 Sel1 repeat 328 361 16.0 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 Pfam PF08238 Sel1 repeat 78 113 34.0 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS24620 0999fd772155106794a329cf439d3c1c 453 Pfam PF08238 Sel1 repeat 293 322 0.0033 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF13193 AMP-binding enzyme C-terminal domain 2471 2548 8.8E-13 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF13193 AMP-binding enzyme C-terminal domain 922 1005 3.5E-10 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF13193 AMP-binding enzyme C-terminal domain 3520 3593 9.9E-11 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 ProSitePatterns PS00455 Putative AMP-binding domain signature. 659 670 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:1.10.1200.10 1020 1099 4.9E-29 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:1.10.1200.10 2579 2643 1.9E-21 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:1.10.1200.10 3622 3687 1.7E-25 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:3.30.300.30 2458 2578 1.4E-38 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:3.30.300.30 3507 3621 9.6E-39 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF56801 3110 3630 1.57E-141 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF52777 2846 3086 6.23E-50 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:3.40.50.1820 3690 3808 1.4E-29 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3641 3656 - T 13-09-2016 IPR006162 Phosphopantetheine attachment site PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:3.40.50.980 2058 2213 1.7E-51 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:3.40.50.980 511 680 7.0E-51 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:3.40.50.980 3110 3262 1.7E-44 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF52777 235 501 1.78E-60 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3254 3265 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF47336 1024 1095 8.64E-20 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF47336 2568 2636 2.22E-14 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF13745 HxxPF-repeated domain 371 461 3.8E-28 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SMART SM00823 Phosphopantetheine attachment site 2574 2642 0.0055 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SMART SM00823 Phosphopantetheine attachment site 1031 1099 5.1E-5 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SMART SM00823 Phosphopantetheine attachment site 3617 3688 0.083 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00550 Phosphopantetheine attachment site 2577 2635 3.5E-10 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00550 Phosphopantetheine attachment site 1033 1094 4.1E-13 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00550 Phosphopantetheine attachment site 3619 3683 4.5E-13 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:2.30.38.10 827 903 1.8E-25 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:2.30.38.10 3424 3501 6.5E-23 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:2.30.38.10 2377 2453 3.6E-26 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF52777 1233 1337 1.33E-34 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF52777 1105 1188 1.33E-34 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF56801 474 1044 3.14E-161 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1444 1597 1.1E-44 T 13-09-2016 IPR010060 Non-ribosomal peptide synthase PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF53474 3688 3948 2.39E-34 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF52777 1602 1795 4.67E-39 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF52777 1781 2027 1.89E-52 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SMART SM00824 Thioesterase 3709 3951 9.6E-4 T 13-09-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2598 2613 - T 13-09-2016 IPR006162 Phosphopantetheine attachment site PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF52777 52 229 4.11E-50 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:3.30.300.30 908 1019 9.9E-35 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:3.40.50.980 3263 3423 3.5E-32 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:3.40.50.980 2214 2376 1.1E-30 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 PANTHER PTHR24095:SF173 690 1181 0.0 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF52777 1327 1574 4.11E-42 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 537 938 1.2E-135 T 13-09-2016 IPR010071 Amino acid adenylation domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3135 3536 9.8E-118 T 13-09-2016 IPR010071 Amino acid adenylation domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2085 2487 2.5E-122 T 13-09-2016 IPR010071 Amino acid adenylation domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF52777 2674 2844 3.11E-42 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF47336 3609 3682 1.26E-16 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00501 AMP-binding enzyme 2065 2463 7.9E-87 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00501 AMP-binding enzyme 516 914 1.5E-95 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00501 AMP-binding enzyme 3116 3512 5.4E-81 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1055 1070 - T 13-09-2016 IPR006162 Phosphopantetheine attachment site PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Gene3D G3DSA:3.40.50.980 681 826 6.2E-46 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00668 Condensation domain 1606 1898 4.6E-56 T 13-09-2016 IPR001242 Condensation domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00668 Condensation domain 49 348 9.5E-74 T 13-09-2016 IPR001242 Condensation domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00668 Condensation domain 1110 1171 6.5E-10 T 13-09-2016 IPR001242 Condensation domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00668 Condensation domain 1236 1440 3.2E-44 T 13-09-2016 IPR001242 Condensation domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00668 Condensation domain 2669 2954 2.7E-60 T 13-09-2016 IPR001242 Condensation domain PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2205 2216 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 PANTHER PTHR24095:SF173 1583 3593 0.0 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 PANTHER PTHR24095 690 1181 0.0 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 PANTHER PTHR24095 1583 3593 0.0 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 SUPERFAMILY SSF56801 2022 2587 3.53E-152 T 13-09-2016 PMA3_RS20190 05ab1178581a4a442320950f4bd0b965 3958 Pfam PF00975 Thioesterase domain 3708 3811 1.0E-21 T 13-09-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 608 624 1.4E-5 T 13-09-2016 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 393 412 1.4E-5 T 13-09-2016 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 Gene3D G3DSA:3.50.50.60 488 633 2.3E-29 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 PANTHER PTHR22893:SF25 1 433 2.1E-193 T 13-09-2016 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 392 645 8.5E-11 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 SUPERFAMILY SSF51395 4 370 2.54E-99 T 13-09-2016 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 SUPERFAMILY SSF51905 380 683 7.77E-31 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 342 3.6E-64 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 414 2.8E-7 T 13-09-2016 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 660 667 2.8E-7 T 13-09-2016 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 609 623 2.8E-7 T 13-09-2016 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 PANTHER PTHR22893 1 433 2.1E-193 T 13-09-2016 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 Gene3D G3DSA:3.50.50.60 391 487 1.2E-18 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 Gene3D G3DSA:3.50.50.60 660 681 1.2E-18 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28015 ab9daa0b2f64ff266a7356427269e7e7 686 Gene3D G3DSA:3.20.20.70 2 376 8.0E-109 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS05250 2b2a4667ed7280ef6933011bf07406f1 381 PANTHER PTHR10566 91 257 7.6E-39 T 13-09-2016 PMA3_RS05250 2b2a4667ed7280ef6933011bf07406f1 381 Pfam PF00144 Beta-lactamase 17 370 1.4E-77 T 13-09-2016 IPR001466 Beta-lactamase-related PMA3_RS05250 2b2a4667ed7280ef6933011bf07406f1 381 Gene3D G3DSA:3.40.710.10 9 377 1.2E-84 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS05250 2b2a4667ed7280ef6933011bf07406f1 381 SUPERFAMILY SSF56601 10 376 3.34E-77 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS05250 2b2a4667ed7280ef6933011bf07406f1 381 PANTHER PTHR10566:SF94 91 257 7.6E-39 T 13-09-2016 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 PANTHER PTHR11709 468 619 9.3E-119 T 13-09-2016 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 Gene3D G3DSA:2.60.40.420 168 373 4.1E-52 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 ProSitePatterns PS00079 Multicopper oxidases signature 1. 595 615 - T 13-09-2016 IPR033138 Multicopper oxidases, conserved site PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 SUPERFAMILY SSF49503 467 617 9.39E-36 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 Gene3D G3DSA:2.60.40.420 44 166 1.4E-31 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 Pfam PF07732 Multicopper oxidase 54 162 1.3E-38 T 13-09-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 32 1.3E-6 T 13-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 Gene3D G3DSA:2.60.40.420 480 618 1.4E-41 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 Pfam PF07731 Multicopper oxidase 507 618 1.9E-24 T 13-09-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 Pfam PF00394 Multicopper oxidase 172 348 5.6E-34 T 13-09-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 PANTHER PTHR11709 47 206 9.3E-119 T 13-09-2016 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 PANTHER PTHR11709 247 359 9.3E-119 T 13-09-2016 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 ProSitePatterns PS00080 Multicopper oxidases signature 2. 600 611 - T 13-09-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 SUPERFAMILY SSF49503 166 385 2.11E-56 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 PANTHER PTHR11709:SF33 247 359 9.3E-119 T 13-09-2016 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 PANTHER PTHR11709:SF33 468 619 9.3E-119 T 13-09-2016 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 PANTHER PTHR11709:SF33 47 206 9.3E-119 T 13-09-2016 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 4 618 1.0E-296 T 13-09-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 PMA3_RS09980 8ee6645c97381b664250bdc5edaa2286 619 SUPERFAMILY SSF49503 48 193 1.08E-38 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 PANTHER PTHR24421 1 376 1.3E-168 T 13-09-2016 PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 PIRSF PIRSF000876 1 381 1.8E-133 T 13-09-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 SMART SM00448 3 122 2.3E-24 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 SUPERFAMILY SSF52172 3 109 1.57E-27 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 Pfam PF01339 CheB methylesterase 200 376 8.5E-58 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 Gene3D G3DSA:3.40.50.180 193 380 4.0E-73 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 Pfam PF00072 Response regulator receiver domain 5 109 3.4E-22 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 PANTHER PTHR24421:SF16 1 376 1.3E-168 T 13-09-2016 PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 Gene3D G3DSA:3.40.50.2300 3 109 1.5E-28 T 13-09-2016 PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 381 39.633 T 13-09-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS21585 9cd992c9d47847b1af409f1476712516 381 SUPERFAMILY SSF52738 195 379 1.7E-63 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 387 525 5.9E-23 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 Gene3D G3DSA:3.30.230.10 628 805 6.9E-64 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 Gene3D G3DSA:3.40.50.300 346 524 8.1E-34 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 SMART SM00464 39 236 5.7E-20 T 13-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 SMART SM00382 383 528 2.8E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 TIGRFAM TIGR00763 lon: endopeptidase La 42 805 4.9E-273 T 13-09-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 391 410 1.1E-46 T 13-09-2016 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 1.1E-46 T 13-09-2016 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 628 644 1.1E-46 T 13-09-2016 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 737 756 1.1E-46 T 13-09-2016 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 760 778 1.1E-46 T 13-09-2016 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 PIRSF PIRSF001174 22 805 1.2E-270 T 13-09-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 SUPERFAMILY SSF52540 345 620 8.99E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 Hamap MF_01973 Lon protease [lon]. 40 804 58.329 T 13-09-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 40 235 1.3E-23 T 13-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 Gene3D G3DSA:1.10.8.60 527 619 7.7E-28 T 13-09-2016 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 607 804 1.7E-75 T 13-09-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 PANTHER PTHR10046 12 805 0.0 T 13-09-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 SUPERFAMILY SSF88697 42 235 4.47E-17 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 SUPERFAMILY SSF54211 629 804 2.66E-46 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS24060 bbe96cbd5d11c0b0dd2697b39e4dd611 805 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 710 718 - T 13-09-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 PMA3_RS10765 fc3abf1b467dfa64abcb5441531ee241 368 Pfam PF01266 FAD dependent oxidoreductase 7 362 6.0E-68 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS10765 fc3abf1b467dfa64abcb5441531ee241 368 Gene3D G3DSA:3.50.50.60 140 221 1.8E-29 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10765 fc3abf1b467dfa64abcb5441531ee241 368 Gene3D G3DSA:3.50.50.60 6 85 1.8E-29 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10765 fc3abf1b467dfa64abcb5441531ee241 368 Gene3D G3DSA:3.50.50.60 324 365 1.8E-29 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10765 fc3abf1b467dfa64abcb5441531ee241 368 SUPERFAMILY SSF51905 7 222 7.34E-46 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10765 fc3abf1b467dfa64abcb5441531ee241 368 SUPERFAMILY SSF51905 263 321 7.34E-46 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10765 fc3abf1b467dfa64abcb5441531ee241 368 PANTHER PTHR13847 4 366 4.8E-161 T 13-09-2016 PMA3_RS10765 fc3abf1b467dfa64abcb5441531ee241 368 PANTHER PTHR13847:SF207 4 366 4.8E-161 T 13-09-2016 PMA3_RS10765 fc3abf1b467dfa64abcb5441531ee241 368 Gene3D G3DSA:3.30.9.10 88 139 4.8E-7 T 13-09-2016 PMA3_RS15100 7884761719edc3e6bf9a65bdced74cd2 342 Pfam PF12710 haloacid dehalogenase-like hydrolase 68 272 7.6E-25 T 13-09-2016 PMA3_RS15100 7884761719edc3e6bf9a65bdced74cd2 342 SUPERFAMILY SSF56784 66 316 3.5E-22 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS15100 7884761719edc3e6bf9a65bdced74cd2 342 Gene3D G3DSA:3.40.50.1000 164 306 2.4E-16 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS15100 7884761719edc3e6bf9a65bdced74cd2 342 Gene3D G3DSA:3.40.50.1000 66 81 2.4E-16 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS28750 0c80c6b14123630fde796ef34e69498f 260 PANTHER PTHR30269 1 260 2.9E-104 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS28750 0c80c6b14123630fde796ef34e69498f 260 Pfam PF01925 Sulfite exporter TauE/SafE 7 257 9.9E-54 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS28750 0c80c6b14123630fde796ef34e69498f 260 PANTHER PTHR30269:SF18 1 260 2.9E-104 T 13-09-2016 PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 435 627 4.2E-46 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 Pfam PF00672 HAMP domain 279 348 1.4E-14 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 SUPERFAMILY SSF58104 320 629 7.19E-74 T 13-09-2016 PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 Pfam PF02743 Cache domain 36 259 2.5E-31 T 13-09-2016 IPR033479 Double Cache domain 1 PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 Gene3D G3DSA:3.30.450.20 141 275 7.6E-27 T 13-09-2016 PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 SUPERFAMILY SSF103190 66 182 9.16E-12 T 13-09-2016 IPR029151 Periplasmic sensor domain-like PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 SMART SM00304 298 352 5.6E-15 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 Gene3D G3DSA:1.10.287.950 381 598 1.5E-54 T 13-09-2016 PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 SMART SM00283 367 628 1.2E-83 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 PANTHER PTHR32089 11 629 1.2E-279 T 13-09-2016 PMA3_RS23370 a9dc0f7ef4957514b5fbf2ab7757ae12 629 PANTHER PTHR32089:SF39 11 629 1.2E-279 T 13-09-2016 PMA3_RS24575 ebc9d78889720430af8e2fa806799bdb 150 Gene3D G3DSA:3.90.1170.40 2 148 5.2E-54 T 13-09-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS24575 ebc9d78889720430af8e2fa806799bdb 150 PANTHER PTHR23404 27 150 1.1E-39 T 13-09-2016 PMA3_RS24575 ebc9d78889720430af8e2fa806799bdb 150 Pfam PF02391 MoaE protein 7 119 1.4E-34 T 13-09-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS24575 ebc9d78889720430af8e2fa806799bdb 150 PANTHER PTHR23404:SF2 27 150 1.1E-39 T 13-09-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS24575 ebc9d78889720430af8e2fa806799bdb 150 SUPERFAMILY SSF54690 3 148 1.96E-51 T 13-09-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS28475 7cf1769f20459217d372d038c8208191 228 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 13-09-2016 IPR011078 Uncharacterised protein family UPF0001 PMA3_RS28475 7cf1769f20459217d372d038c8208191 228 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 223 7.9E-77 T 13-09-2016 IPR011078 Uncharacterised protein family UPF0001 PMA3_RS28475 7cf1769f20459217d372d038c8208191 228 PANTHER PTHR10146 1 225 6.4E-99 T 13-09-2016 IPR011078 Uncharacterised protein family UPF0001 PMA3_RS28475 7cf1769f20459217d372d038c8208191 228 SUPERFAMILY SSF51419 1 221 9.95E-80 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS28475 7cf1769f20459217d372d038c8208191 228 Pfam PF01168 Alanine racemase, N-terminal domain 18 223 2.2E-33 T 13-09-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS28475 7cf1769f20459217d372d038c8208191 228 PIRSF PIRSF004848 1 228 1.9E-71 T 13-09-2016 IPR011078 Uncharacterised protein family UPF0001 PMA3_RS28475 7cf1769f20459217d372d038c8208191 228 Gene3D G3DSA:3.20.20.10 1 226 8.3E-92 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS14195 808bf5e6d48a7b196b0a7c72a0aa17a5 241 Pfam PF02525 Flavodoxin-like fold 1 207 3.4E-53 T 13-09-2016 IPR003680 Flavodoxin-like fold PMA3_RS14195 808bf5e6d48a7b196b0a7c72a0aa17a5 241 Gene3D G3DSA:3.40.50.360 1 226 3.4E-70 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS14195 808bf5e6d48a7b196b0a7c72a0aa17a5 241 PANTHER PTHR10204:SF46 1 230 6.6E-131 T 13-09-2016 PMA3_RS14195 808bf5e6d48a7b196b0a7c72a0aa17a5 241 SUPERFAMILY SSF52218 1 230 3.14E-68 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS14195 808bf5e6d48a7b196b0a7c72a0aa17a5 241 PANTHER PTHR10204 1 230 6.6E-131 T 13-09-2016 PMA3_RS12030 386d3c750c4bd19ecf154beff306a81d 467 SUPERFAMILY SSF160387 372 464 9.68E-12 T 13-09-2016 PMA3_RS12030 386d3c750c4bd19ecf154beff306a81d 467 PANTHER PTHR30024 1 394 7.7E-168 T 13-09-2016 PMA3_RS12030 386d3c750c4bd19ecf154beff306a81d 467 SUPERFAMILY SSF53850 59 325 4.17E-38 T 13-09-2016 PMA3_RS12030 386d3c750c4bd19ecf154beff306a81d 467 PANTHER PTHR30024:SF4 1 394 7.7E-168 T 13-09-2016 PMA3_RS12030 386d3c750c4bd19ecf154beff306a81d 467 Gene3D G3DSA:3.40.190.10 125 249 1.0E-17 T 13-09-2016 PMA3_RS12030 386d3c750c4bd19ecf154beff306a81d 467 Pfam PF13379 NMT1-like family 63 265 3.7E-14 T 13-09-2016 PMA3_RS16915 fd7f6a763d82c526072c6f6b60aa248f 217 ProDom PD022759 ALGINATE BIOSYNTHESIS ALGF PRECURSOR SIGNAL PERIPLASMIC TRANSFERASE O-ACETYLTRANSFERASE 7 205 5.0E-8 T 13-09-2016 PMA3_RS16915 fd7f6a763d82c526072c6f6b60aa248f 217 Pfam PF11182 Alginate O-acetyl transferase AlgF 10 192 1.8E-17 T 13-09-2016 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 Gene3D G3DSA:3.40.50.2300 3 120 1.3E-35 T 13-09-2016 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 Pfam PF02954 Bacterial regulatory protein, Fis family 407 446 5.6E-13 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 154 167 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 343 352 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 Pfam PF00072 Response regulator receiver domain 5 114 8.4E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 Gene3D G3DSA:1.10.8.60 303 372 5.9E-23 T 13-09-2016 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 413 430 2.7E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 430 450 2.7E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 SUPERFAMILY SSF46689 343 446 1.34E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 Gene3D G3DSA:1.10.10.60 403 445 1.4E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 Pfam PF00158 Sigma-54 interaction domain 134 296 1.3E-67 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 SUPERFAMILY SSF52172 3 175 3.13E-41 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 PANTHER PTHR32071 1 461 1.4E-248 T 13-09-2016 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 PANTHER PTHR32071:SF21 1 461 1.4E-248 T 13-09-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 Gene3D G3DSA:3.40.50.300 134 302 2.5E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 SUPERFAMILY SSF52540 132 371 1.45E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 SMART SM00382 150 293 7.1E-13 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS21740 2e1c3dde3783c82abf65dab1f6bf283b 461 SMART SM00448 3 114 1.9E-34 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 PANTHER PTHR23117:SF13 1 204 1.6E-90 T 13-09-2016 PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 184 6.9E-73 T 13-09-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 SUPERFAMILY SSF52540 4 188 1.42E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 Gene3D G3DSA:3.30.63.10 48 87 4.4E-26 T 13-09-2016 PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 Gene3D G3DSA:3.40.50.300 88 202 2.4E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 Gene3D G3DSA:3.40.50.300 2 21 2.4E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 Gene3D G3DSA:3.40.50.300 22 47 5.3E-5 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 SMART SM00072 5 187 1.7E-58 T 13-09-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 Hamap MF_00328 Guanylate kinase [gmk]. 4 187 35.707 T 13-09-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 Pfam PF00625 Guanylate kinase 7 185 2.4E-53 T 13-09-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 PANTHER PTHR23117 1 204 1.6E-90 T 13-09-2016 PMA3_RS29555 e21c5e4abc2cf43097e7f8f631b410f1 206 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 13-09-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 SUPERFAMILY SSF52317 15 205 5.56E-46 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 PANTHER PTHR11019 65 331 5.8E-75 T 13-09-2016 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 SUPERFAMILY SSF46689 224 274 2.91E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 SMART SM00342 240 323 3.0E-28 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 PANTHER PTHR11019 16 39 5.8E-75 T 13-09-2016 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 Pfam PF01965 DJ-1/PfpI family 20 183 3.4E-16 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 Gene3D G3DSA:1.10.10.60 231 277 8.3E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 Gene3D G3DSA:1.10.10.60 280 335 5.6E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 SUPERFAMILY SSF46689 276 324 5.82E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 Pfam PF12833 Helix-turn-helix domain 246 322 3.4E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 PANTHER PTHR11019:SF90 16 39 5.8E-75 T 13-09-2016 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 PANTHER PTHR11019:SF90 65 331 5.8E-75 T 13-09-2016 PMA3_RS11945 d1961256e8307d3f43a16a9f93cee2fe 367 Gene3D G3DSA:3.40.50.880 17 230 1.1E-42 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS11700 9ae5976738433cbb23c7d12ea6c1df45 403 SUPERFAMILY SSF53901 251 392 1.65E-22 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11700 9ae5976738433cbb23c7d12ea6c1df45 403 SUPERFAMILY SSF53901 7 246 1.27E-16 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11700 9ae5976738433cbb23c7d12ea6c1df45 403 PIRSF PIRSF000429 1 393 1.5E-19 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS11700 9ae5976738433cbb23c7d12ea6c1df45 403 Gene3D G3DSA:3.40.47.10 33 117 5.2E-8 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11700 9ae5976738433cbb23c7d12ea6c1df45 403 Gene3D G3DSA:3.40.47.10 212 241 5.2E-8 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11700 9ae5976738433cbb23c7d12ea6c1df45 403 PANTHER PTHR18919 2 402 1.3E-74 T 13-09-2016 PMA3_RS11700 9ae5976738433cbb23c7d12ea6c1df45 403 PANTHER PTHR18919:SF108 2 402 1.3E-74 T 13-09-2016 PMA3_RS11700 9ae5976738433cbb23c7d12ea6c1df45 403 Gene3D G3DSA:3.40.47.10 261 383 5.3E-13 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11700 9ae5976738433cbb23c7d12ea6c1df45 403 Gene3D G3DSA:3.40.47.10 161 200 5.3E-13 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 SUPERFAMILY SSF53850 22 360 4.08E-94 T 13-09-2016 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 305 331 1.3E-58 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 27 43 1.3E-58 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 119 135 1.3E-58 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 150 164 1.3E-58 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 43 64 1.3E-58 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 173 192 1.3E-58 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 86 99 1.3E-58 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 70 84 1.3E-58 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 210 229 1.3E-58 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 260 279 1.3E-58 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 Pfam PF13416 Bacterial extracellular solute-binding protein 38 326 1.9E-30 T 13-09-2016 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 Gene3D G3DSA:3.40.190.10 35 132 1.8E-9 T 13-09-2016 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PANTHER PTHR30222 6 360 1.1E-196 T 13-09-2016 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 Gene3D G3DSA:3.40.190.10 133 309 2.3E-70 T 13-09-2016 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PANTHER PTHR30222:SF11 6 360 1.1E-196 T 13-09-2016 PMA3_RS13690 e9d1a9f2c2ed11b7a6e1fa8c800262c7 361 PIRSF PIRSF019574 2 361 5.5E-126 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS00015 b67daef82f6fb5803420e6431025bcd4 316 PANTHER PTHR21064 12 292 1.1E-42 T 13-09-2016 PMA3_RS00015 b67daef82f6fb5803420e6431025bcd4 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 142.379 T 13-09-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 PMA3_RS00015 b67daef82f6fb5803420e6431025bcd4 316 Pfam PF01636 Phosphotransferase enzyme family 28 255 2.9E-33 T 13-09-2016 IPR002575 Aminoglycoside phosphotransferase PMA3_RS00015 b67daef82f6fb5803420e6431025bcd4 316 Gene3D G3DSA:3.30.200.20 1 102 8.9E-34 T 13-09-2016 PMA3_RS00015 b67daef82f6fb5803420e6431025bcd4 316 Gene3D G3DSA:3.90.1200.10 106 308 6.3E-57 T 13-09-2016 PMA3_RS00015 b67daef82f6fb5803420e6431025bcd4 316 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 303 1.5E-86 T 13-09-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 PMA3_RS00015 b67daef82f6fb5803420e6431025bcd4 316 SUPERFAMILY SSF56112 5 307 4.52E-65 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.5E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.5E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.5E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 SUPERFAMILY SSF46785 1 107 2.72E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 292 1.3E-111 T 13-09-2016 IPR017685 HTH-type transcriptional regulator ArgP PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 Pfam PF03466 LysR substrate binding domain 89 273 2.6E-16 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 Gene3D G3DSA:3.40.190.10 92 184 3.1E-39 T 13-09-2016 PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 SUPERFAMILY SSF53850 85 288 1.76E-22 T 13-09-2016 PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 Gene3D G3DSA:3.40.190.10 185 256 5.8E-4 T 13-09-2016 PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 295 48.066 T 13-09-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.6E-14 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 PANTHER PTHR30579:SF2 1 293 2.1E-119 T 13-09-2016 PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 PANTHER PTHR30579 1 293 2.1E-119 T 13-09-2016 PMA3_RS23580 19bb6cdd660fa0d39bedc661429c6627 297 Gene3D G3DSA:1.10.10.10 2 80 6.2E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19525 d9296b7d16ce9aa5b888f13b33dc11f6 120 PANTHER PTHR38780:SF1 2 120 3.0E-40 T 13-09-2016 PMA3_RS19525 d9296b7d16ce9aa5b888f13b33dc11f6 120 SUPERFAMILY SSF75169 4 119 2.88E-31 T 13-09-2016 IPR027396 DsrEFH-like PMA3_RS19525 d9296b7d16ce9aa5b888f13b33dc11f6 120 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 5 119 4.8E-37 T 13-09-2016 IPR017462 Sulphur relay, TusC/DsrF PMA3_RS19525 d9296b7d16ce9aa5b888f13b33dc11f6 120 PANTHER PTHR38780 2 120 3.0E-40 T 13-09-2016 PMA3_RS19525 d9296b7d16ce9aa5b888f13b33dc11f6 120 Pfam PF02635 DsrE/DsrF-like family 4 119 4.1E-22 T 13-09-2016 IPR003787 Sulphur relay, DsrE/F-like protein PMA3_RS19525 d9296b7d16ce9aa5b888f13b33dc11f6 120 Gene3D G3DSA:3.40.1260.10 3 119 2.2E-38 T 13-09-2016 IPR027396 DsrEFH-like PMA3_RS06605 a0896837aa86c7205c0068615123eb4d 805 Pfam PF13208 TerB N-terminal domain 127 332 1.3E-61 T 13-09-2016 IPR025266 TerB, N-terminal PMA3_RS06605 a0896837aa86c7205c0068615123eb4d 805 Gene3D G3DSA:1.10.3680.10 523 647 9.2E-34 T 13-09-2016 IPR029024 TerB-like PMA3_RS06605 a0896837aa86c7205c0068615123eb4d 805 Pfam PF05099 Tellurite resistance protein TerB 518 639 1.3E-12 T 13-09-2016 IPR007791 Co-chaperone DjlA, N-terminal PMA3_RS06605 a0896837aa86c7205c0068615123eb4d 805 SUPERFAMILY SSF158682 531 647 6.15E-21 T 13-09-2016 IPR029024 TerB-like PMA3_RS06605 a0896837aa86c7205c0068615123eb4d 805 Pfam PF15615 TerB-C domain 669 803 4.3E-38 T 13-09-2016 IPR028932 TerB-C domain PMA3_RS21235 11de8020a8489dc79e66fcf1f5e0120c 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 2.1E-154 T 13-09-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PMA3_RS21235 11de8020a8489dc79e66fcf1f5e0120c 437 PANTHER PTHR30588:SF0 1 437 7.8E-212 T 13-09-2016 PMA3_RS21235 11de8020a8489dc79e66fcf1f5e0120c 437 Pfam PF05525 Branched-chain amino acid transport protein 7 427 9.7E-153 T 13-09-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PMA3_RS21235 11de8020a8489dc79e66fcf1f5e0120c 437 PANTHER PTHR30588 1 437 7.8E-212 T 13-09-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 Pfam PF00583 Acetyltransferase (GNAT) family 331 403 2.6E-8 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 SUPERFAMILY SSF55729 288 410 9.41E-18 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 PANTHER PTHR30602 1 432 1.4E-250 T 13-09-2016 PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 432 224.232 T 13-09-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 Gene3D G3DSA:3.40.1160.10 21 280 1.1E-59 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 PANTHER PTHR30602:SF3 1 432 1.4E-250 T 13-09-2016 PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 4 432 2.4E-219 T 13-09-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 Gene3D G3DSA:3.40.630.30 288 428 3.3E-35 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 PIRSF PIRSF000423 1 432 3.7E-192 T 13-09-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 Pfam PF00696 Amino acid kinase family 36 259 6.6E-19 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS28965 a5bcbe53cd26d720b5f1e8b270a65a10 432 SUPERFAMILY SSF53633 3 283 9.08E-63 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 Gene3D G3DSA:3.40.50.980 276 423 8.2E-16 T 13-09-2016 PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 36 91 1.6E-10 T 13-09-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 SUPERFAMILY SSF56801 19 643 8.77E-132 T 13-09-2016 PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 542 613 1.1E-5 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 PANTHER PTHR24095:SF46 1 648 1.7E-299 T 13-09-2016 PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 269 280 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 PANTHER PTHR24095 1 648 1.7E-299 T 13-09-2016 PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 4 651 5.9E-268 T 13-09-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 Gene3D G3DSA:3.30.300.30 525 629 7.7E-17 T 13-09-2016 PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 Gene3D G3DSA:3.40.50.980 90 275 3.8E-28 T 13-09-2016 PMA3_RS12365 d61e04105d6b46d00b6bcc106ea6b154 651 Pfam PF00501 AMP-binding enzyme 95 525 5.3E-46 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS01630 a544e9399c0b413ec76da4698126e426 239 SUPERFAMILY SSF89392 64 230 3.26E-10 T 13-09-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX PMA3_RS01630 a544e9399c0b413ec76da4698126e426 239 Gene3D G3DSA:2.50.20.10 64 231 4.3E-12 T 13-09-2016 PMA3_RS01630 a544e9399c0b413ec76da4698126e426 239 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 76 231 7.2E-9 T 13-09-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 SUPERFAMILY SSF69255 386 476 1.05E-25 T 13-09-2016 PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 522 5.6E-123 T 13-09-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 SUPERFAMILY SSF69349 466 563 7.06E-5 T 13-09-2016 PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 SUPERFAMILY SSF69349 707 756 7.06E-5 T 13-09-2016 PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 SUPERFAMILY SSF69279 206 387 1.7E-42 T 13-09-2016 PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 Gene3D G3DSA:2.40.50.230 394 475 8.5E-25 T 13-09-2016 IPR006531 Gp5 N-terminal PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 Gene3D G3DSA:3.55.50.10 114 208 8.5E-29 T 13-09-2016 PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 618 764 1.5E-50 T 13-09-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 SUPERFAMILY SSF69279 15 196 2.55E-45 T 13-09-2016 PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 16 523 5.4E-74 T 13-09-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 Gene3D G3DSA:4.10.180.10 302 317 4.4E-5 T 13-09-2016 IPR027440 Capsid protein alpha-like domain PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 Pfam PF05954 Phage late control gene D protein (GPD) 33 358 6.3E-57 T 13-09-2016 PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 PANTHER PTHR32305:SF7 30 779 1.3E-155 T 13-09-2016 PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 PANTHER PTHR32305 30 779 1.3E-155 T 13-09-2016 PMA3_RS10575 d8c5f7ec6149a10c1604554759d8394f 792 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 496 599 7.0E-37 T 13-09-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PMA3_RS02935 020b226687010d26b1e711203d8016ac 258 SMART SM00346 6 92 1.3E-17 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS02935 020b226687010d26b1e711203d8016ac 258 Pfam PF09339 IclR helix-turn-helix domain 6 56 9.9E-15 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS02935 020b226687010d26b1e711203d8016ac 258 Pfam PF01614 Bacterial transcriptional regulator 123 248 3.5E-18 T 13-09-2016 IPR014757 Transcription regulator IclR, C-terminal PMA3_RS02935 020b226687010d26b1e711203d8016ac 258 PANTHER PTHR30136:SF13 6 247 2.0E-76 T 13-09-2016 PMA3_RS02935 020b226687010d26b1e711203d8016ac 258 Gene3D G3DSA:3.30.450.40 81 250 3.4E-46 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS02935 020b226687010d26b1e711203d8016ac 258 PANTHER PTHR30136 6 247 2.0E-76 T 13-09-2016 PMA3_RS02935 020b226687010d26b1e711203d8016ac 258 SUPERFAMILY SSF55781 80 249 4.64E-35 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS02935 020b226687010d26b1e711203d8016ac 258 Gene3D G3DSA:1.10.10.10 6 77 2.0E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS02935 020b226687010d26b1e711203d8016ac 258 SUPERFAMILY SSF46785 6 76 1.8E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19630 390bfc2edfd0bec13fc1277a66f77b37 381 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 12 365 40.35 T 13-09-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PMA3_RS19630 390bfc2edfd0bec13fc1277a66f77b37 381 Gene3D G3DSA:3.40.50.620 9 217 7.4E-97 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS19630 390bfc2edfd0bec13fc1277a66f77b37 381 Gene3D G3DSA:2.40.30.10 287 368 2.1E-30 T 13-09-2016 PMA3_RS19630 390bfc2edfd0bec13fc1277a66f77b37 381 PANTHER PTHR11933:SF10 7 365 7.2E-206 T 13-09-2016 PMA3_RS19630 390bfc2edfd0bec13fc1277a66f77b37 381 SUPERFAMILY SSF52402 11 249 7.5E-56 T 13-09-2016 PMA3_RS19630 390bfc2edfd0bec13fc1277a66f77b37 381 Gene3D G3DSA:2.30.30.280 218 285 1.7E-32 T 13-09-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 PMA3_RS19630 390bfc2edfd0bec13fc1277a66f77b37 381 Pfam PF03054 tRNA methyl transferase 12 364 1.0E-136 T 13-09-2016 PMA3_RS19630 390bfc2edfd0bec13fc1277a66f77b37 381 PANTHER PTHR11933 7 365 7.2E-206 T 13-09-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PMA3_RS19630 390bfc2edfd0bec13fc1277a66f77b37 381 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 12 364 3.8E-141 T 13-09-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PMA3_RS21690 553a456bbbca8713fa9326605c0a935d 441 PANTHER PTHR37533 113 441 1.9E-31 T 13-09-2016 PMA3_RS21690 553a456bbbca8713fa9326605c0a935d 441 Pfam PF02120 Flagellar hook-length control protein FliK 306 386 2.0E-19 T 13-09-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal PMA3_RS21690 553a456bbbca8713fa9326605c0a935d 441 PANTHER PTHR37533:SF2 113 441 1.9E-31 T 13-09-2016 PMA3_RS01910 879b5040e08bccb1d240300bed517565 629 PANTHER PTHR30557 23 99 0.0 T 13-09-2016 PMA3_RS01910 879b5040e08bccb1d240300bed517565 629 Pfam PF01964 Radical SAM ThiC family 141 590 2.7E-199 T 13-09-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PMA3_RS01910 879b5040e08bccb1d240300bed517565 629 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 140 592 1.3E-216 T 13-09-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PMA3_RS01910 879b5040e08bccb1d240300bed517565 629 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 140 595 56.041 T 13-09-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PMA3_RS01910 879b5040e08bccb1d240300bed517565 629 PANTHER PTHR30557:SF1 133 163 0.0 T 13-09-2016 PMA3_RS01910 879b5040e08bccb1d240300bed517565 629 PANTHER PTHR30557:SF1 192 626 0.0 T 13-09-2016 PMA3_RS01910 879b5040e08bccb1d240300bed517565 629 Pfam PF13667 ThiC-associated domain 24 101 5.6E-30 T 13-09-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PMA3_RS01910 879b5040e08bccb1d240300bed517565 629 PANTHER PTHR30557 133 163 0.0 T 13-09-2016 PMA3_RS01910 879b5040e08bccb1d240300bed517565 629 PANTHER PTHR30557 192 626 0.0 T 13-09-2016 PMA3_RS01910 879b5040e08bccb1d240300bed517565 629 PANTHER PTHR30557:SF1 23 99 0.0 T 13-09-2016 PMA3_RS22730 f7aac53a4412f21b0bd241afc9db0541 280 PANTHER PTHR32243 2 280 3.5E-104 T 13-09-2016 PMA3_RS22730 f7aac53a4412f21b0bd241afc9db0541 280 SUPERFAMILY SSF161098 8 280 4.86E-67 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS22730 f7aac53a4412f21b0bd241afc9db0541 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 273 2.9E-16 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS22730 f7aac53a4412f21b0bd241afc9db0541 280 PANTHER PTHR32243:SF18 2 280 3.5E-104 T 13-09-2016 PMA3_RS22730 f7aac53a4412f21b0bd241afc9db0541 280 Gene3D G3DSA:1.10.3720.10 6 267 3.6E-60 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 Pfam PF00364 Biotin-requiring enzyme 588 653 7.8E-14 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 611 628 - T 13-09-2016 IPR001882 Biotin-binding site PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 SUPERFAMILY SSF51230 585 655 1.83E-18 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 Pfam PF02785 Biotin carboxylase C-terminal domain 338 444 3.0E-32 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 PANTHER PTHR18866:SF102 1 655 0.0 T 13-09-2016 PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 Gene3D G3DSA:2.40.50.100 586 655 1.5E-20 T 13-09-2016 PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 324 4.0E-71 T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 SUPERFAMILY SSF56059 85 349 3.36E-66 T 13-09-2016 PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 SMART SM00878 338 444 7.7E-49 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 Gene3D G3DSA:3.30.1490.20 132 203 1.0E-24 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 SUPERFAMILY SSF52440 4 115 1.22E-49 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 2.5E-45 T 13-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 PANTHER PTHR18866 1 655 0.0 T 13-09-2016 PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 SUPERFAMILY SSF51246 333 447 1.31E-36 T 13-09-2016 IPR011054 Rudiment single hybrid motif PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 Gene3D G3DSA:3.30.470.20 207 447 6.1E-98 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS07220 a50b7358ac3d5458983df882030b06f0 655 Gene3D G3DSA:3.40.50.20 4 131 3.3E-52 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 PANTHER PTHR24423 1 272 4.1E-153 T 13-09-2016 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 SMART SM00388 132 197 7.0E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 PANTHER PTHR24423 288 358 4.1E-153 T 13-09-2016 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 SMART SM00387 236 356 1.7E-27 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 SMART SM00091 6 74 1.5E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 356 1.2E-13 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 SUPERFAMILY SSF55785 4 100 2.79E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 136 189 1.9E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 PANTHER PTHR24423:SF488 1 272 4.1E-153 T 13-09-2016 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 PANTHER PTHR24423:SF488 288 358 4.1E-153 T 13-09-2016 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 Gene3D G3DSA:3.30.450.20 4 111 2.8E-20 T 13-09-2016 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 Gene3D G3DSA:3.30.565.10 198 356 5.6E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 3.5E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 3.5E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 353 3.5E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 Gene3D G3DSA:1.10.287.130 128 189 2.6E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 Pfam PF00989 PAS fold 9 107 6.3E-6 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 SUPERFAMILY SSF47384 128 194 2.75E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS01170 f4bb6947e8552b74c91ac691c9c966d5 361 SUPERFAMILY SSF55874 199 354 2.23E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30180 ec91caa053718bed9a68fba38c904a5a 341 Pfam PF01476 LysM domain 31 76 7.9E-13 T 13-09-2016 IPR018392 LysM domain PMA3_RS30180 ec91caa053718bed9a68fba38c904a5a 341 PANTHER PTHR34700 20 340 1.0E-88 T 13-09-2016 PMA3_RS30180 ec91caa053718bed9a68fba38c904a5a 341 Gene3D G3DSA:3.10.350.10 29 77 4.3E-8 T 13-09-2016 IPR018392 LysM domain PMA3_RS30180 ec91caa053718bed9a68fba38c904a5a 341 SMART SM00257 30 78 0.0013 T 13-09-2016 IPR018392 LysM domain PMA3_RS30180 ec91caa053718bed9a68fba38c904a5a 341 SUPERFAMILY SSF54106 29 77 7.32E-8 T 13-09-2016 IPR018392 LysM domain PMA3_RS30180 ec91caa053718bed9a68fba38c904a5a 341 PANTHER PTHR34700:SF2 20 340 1.0E-88 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 Gene3D G3DSA:3.30.70.1430 42 142 1.6E-26 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 SUPERFAMILY SSF82693 155 191 3.92E-18 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 SUPERFAMILY SSF82693 277 333 3.92E-18 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 Gene3D G3DSA:3.30.70.1430 571 664 5.3E-7 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 Gene3D G3DSA:3.30.2090.10 192 274 3.0E-19 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 Gene3D G3DSA:3.30.2090.10 726 818 3.7E-16 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 SUPERFAMILY SSF82714 193 275 1.57E-17 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1050 0.0 T 13-09-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 Gene3D G3DSA:1.10.3850.10 826 1041 2.4E-60 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 Gene3D G3DSA:1.10.3850.10 283 508 1.3E-51 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 PANTHER PTHR32063 2 1052 0.0 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 SUPERFAMILY SSF82693 577 666 4.24E-8 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 Pfam PF00873 AcrB/AcrD/AcrF family 6 1038 0.0 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 8.8E-22 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 8.8E-22 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 8.8E-22 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 8.8E-22 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 8.8E-22 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 8.8E-22 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 SUPERFAMILY SSF82866 299 506 3.27E-34 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 SUPERFAMILY SSF82693 42 127 5.23E-20 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 SUPERFAMILY SSF82714 726 817 2.49E-14 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 PANTHER PTHR32063:SF24 2 1052 0.0 T 13-09-2016 PMA3_RS06480 92df1abb7cfb66220d3147b6f3bb3b35 1055 SUPERFAMILY SSF82866 817 1043 6.28E-58 T 13-09-2016 PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 266 9.2E-57 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 11 22 - T 13-09-2016 IPR000150 Cof protein GO:0016787 PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 SUPERFAMILY SSF56784 7 271 3.99E-62 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 266 2.5E-52 T 13-09-2016 IPR000150 Cof protein GO:0016787 PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 PANTHER PTHR10000:SF8 8 272 2.0E-56 T 13-09-2016 PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 Gene3D G3DSA:3.30.1240.10 96 184 7.5E-9 T 13-09-2016 PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 PANTHER PTHR10000 8 272 2.0E-56 T 13-09-2016 PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 Gene3D G3DSA:3.40.50.1000 2 79 3.1E-46 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 Gene3D G3DSA:3.40.50.1000 185 271 3.1E-46 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 239 3.6E-28 T 13-09-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 PMA3_RS13205 475c4c153950db9d9e9c8f8e388ace68 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 13-09-2016 PMA3_RS21290 98814d0fd927b74eaaca7fa1e529e2bd 552 Pfam PF00474 Sodium:solute symporter family 65 471 8.5E-128 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS21290 98814d0fd927b74eaaca7fa1e529e2bd 552 PANTHER PTHR11819 34 541 7.1E-289 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS21290 98814d0fd927b74eaaca7fa1e529e2bd 552 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 65 469 3.2E-62 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS21290 98814d0fd927b74eaaca7fa1e529e2bd 552 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 180 205 - T 13-09-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PMA3_RS21290 98814d0fd927b74eaaca7fa1e529e2bd 552 PANTHER PTHR11819:SF13 34 541 7.1E-289 T 13-09-2016 PMA3_RS01670 214ebd1b6184d76afc07d8627b41f680 86 SUPERFAMILY SSF47336 2 83 1.2E-13 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS01670 214ebd1b6184d76afc07d8627b41f680 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 9.8E-12 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS01670 214ebd1b6184d76afc07d8627b41f680 86 Gene3D G3DSA:1.10.1200.10 2 83 8.3E-19 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS01010 b6d068ea6912a1b420e8cba95f9cb543 257 PANTHER PTHR24220:SF472 9 255 3.0E-162 T 13-09-2016 PMA3_RS01010 b6d068ea6912a1b420e8cba95f9cb543 257 Gene3D G3DSA:3.40.50.300 6 254 4.6E-81 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01010 b6d068ea6912a1b420e8cba95f9cb543 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS01010 b6d068ea6912a1b420e8cba95f9cb543 257 Pfam PF00005 ABC transporter 23 182 2.9E-33 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS01010 b6d068ea6912a1b420e8cba95f9cb543 257 SMART SM00382 32 230 4.0E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS01010 b6d068ea6912a1b420e8cba95f9cb543 257 PANTHER PTHR24220 9 255 3.0E-162 T 13-09-2016 PMA3_RS01010 b6d068ea6912a1b420e8cba95f9cb543 257 PIRSF PIRSF039085 4 257 2.4E-116 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS01010 b6d068ea6912a1b420e8cba95f9cb543 257 SUPERFAMILY SSF52540 8 252 7.62E-75 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 13-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.5E-37 T 13-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 Gene3D G3DSA:3.40.50.720 8 119 5.3E-36 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 Gene3D G3DSA:3.40.50.720 120 297 3.1E-58 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 SUPERFAMILY SSF52283 7 136 9.64E-50 T 13-09-2016 PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 5.9E-49 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 PANTHER PTHR10996 1 369 5.8E-237 T 13-09-2016 PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 SUPERFAMILY SSF51735 108 295 1.15E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 SUPERFAMILY SSF55021 332 408 1.8E-17 T 13-09-2016 PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 Gene3D G3DSA:3.30.70.260 324 408 4.1E-27 T 13-09-2016 PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 13-09-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PMA3_RS28810 44f6a1e8b625753b170dfa35f22a282c 409 PANTHER PTHR10996:SF18 1 369 5.8E-237 T 13-09-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 PMA3_RS17710 be14ecb18206bb65de75250ca013043f 196 SUPERFAMILY SSF54909 6 101 1.61E-16 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS17710 be14ecb18206bb65de75250ca013043f 196 PANTHER PTHR40057:SF1 6 186 2.3E-27 T 13-09-2016 PMA3_RS17710 be14ecb18206bb65de75250ca013043f 196 Gene3D G3DSA:3.30.70.900 12 94 3.2E-10 T 13-09-2016 PMA3_RS17710 be14ecb18206bb65de75250ca013043f 196 PANTHER PTHR40057 6 186 2.3E-27 T 13-09-2016 PMA3_RS17710 be14ecb18206bb65de75250ca013043f 196 Pfam PF03992 Antibiotic biosynthesis monooxygenase 11 85 1.4E-6 T 13-09-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 Gene3D G3DSA:3.30.1340.10 1 89 2.2E-26 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 4.0E-10 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.0E-10 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 4.0E-10 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 2 84 2.6E-22 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 PANTHER PTHR33705 1 91 2.7E-34 T 13-09-2016 PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 Pfam PF00381 PTS HPr component phosphorylation site 5 84 1.3E-25 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 SUPERFAMILY SSF55594 1 89 1.44E-23 T 13-09-2016 IPR000032 Phosphocarrier HPr protein-like PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 PANTHER PTHR33705:SF2 1 91 2.7E-34 T 13-09-2016 PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 13-09-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PMA3_RS25125 c572bc900931ff36de88634e8c2a6111 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 13-09-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 146 199 1.1E-16 T 13-09-2016 PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 Gene3D G3DSA:1.10.357.10 63 201 1.9E-50 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 SUPERFAMILY SSF46689 4 85 1.7E-20 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 PANTHER PTHR30328 8 197 2.9E-45 T 13-09-2016 PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 Gene3D G3DSA:1.10.10.60 5 62 1.0E-22 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 SUPERFAMILY SSF48498 82 198 8.9E-15 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 13-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.6E-9 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.6E-9 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 PANTHER PTHR30328:SF4 8 197 2.9E-45 T 13-09-2016 PMA3_RS05520 da48d98ed27d62260d55d8dce8167a79 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.3E-17 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.5E-5 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.5E-5 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 PANTHER PTHR11751 130 515 6.2E-112 T 13-09-2016 PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 Gene3D G3DSA:1.10.10.10 19 90 6.0E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 86 1.5E-14 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 SUPERFAMILY SSF53383 154 515 2.85E-79 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 SUPERFAMILY SSF46785 17 94 5.4E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 PANTHER PTHR11751:SF353 130 515 6.2E-112 T 13-09-2016 PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 SMART SM00345 27 86 6.1E-14 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 Pfam PF00155 Aminotransferase class I and II 188 425 1.4E-15 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS29790 af7cef92c40274e2de42d78d9d88a0f8 516 Gene3D G3DSA:3.40.640.10 186 400 1.3E-57 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 46.646 T 13-09-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 SUPERFAMILY SSF53738 257 363 9.42E-29 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 362 7.0E-30 T 13-09-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 13-09-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 Gene3D G3DSA:3.40.120.10 250 366 3.3E-30 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 5.3E-188 T 13-09-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 439 2.4E-11 T 13-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 134 3.1E-44 T 13-09-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 SUPERFAMILY SSF53738 2 180 5.89E-48 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 PANTHER PTHR22573:SF15 4 442 2.4E-163 T 13-09-2016 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 1.8E-14 T 13-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 1.8E-14 T 13-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 1.8E-14 T 13-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 PANTHER PTHR22573 4 442 2.4E-163 T 13-09-2016 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 SUPERFAMILY SSF55957 359 443 2.35E-19 T 13-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 Gene3D G3DSA:3.40.120.10 3 152 4.5E-46 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 Gene3D G3DSA:3.30.310.50 368 442 1.3E-16 T 13-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 SUPERFAMILY SSF53738 155 256 3.06E-30 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 1.3E-18 T 13-09-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS25525 fbccdeb51847b6ff50c9f1e82fc3f17c 445 Gene3D G3DSA:3.40.120.10 175 249 5.2E-26 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS21955 f846de9740dd92fc968d49b512100d1d 271 PANTHER PTHR34990:SF2 2 267 1.4E-141 T 13-09-2016 PMA3_RS21955 f846de9740dd92fc968d49b512100d1d 271 PANTHER PTHR34990 2 267 1.4E-141 T 13-09-2016 PMA3_RS21955 f846de9740dd92fc968d49b512100d1d 271 SUPERFAMILY SSF56300 192 253 1.3E-30 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS21955 f846de9740dd92fc968d49b512100d1d 271 SUPERFAMILY SSF56300 15 136 1.3E-30 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS21955 f846de9740dd92fc968d49b512100d1d 271 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 17 231 6.7E-12 T 13-09-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type PMA3_RS21955 f846de9740dd92fc968d49b512100d1d 271 Gene3D G3DSA:3.60.21.10 199 251 4.2E-31 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS21955 f846de9740dd92fc968d49b512100d1d 271 Gene3D G3DSA:3.60.21.10 16 150 4.2E-31 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS06215 0ef956565cb5011e5da56d69cf4700d4 320 Pfam PF00849 RNA pseudouridylate synthase 104 252 1.2E-31 T 13-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS06215 0ef956565cb5011e5da56d69cf4700d4 320 Pfam PF01479 S4 domain 23 69 1.1E-8 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS06215 0ef956565cb5011e5da56d69cf4700d4 320 SMART SM00363 23 82 2.8E-7 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS06215 0ef956565cb5011e5da56d69cf4700d4 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 314 8.8E-75 T 13-09-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS06215 0ef956565cb5011e5da56d69cf4700d4 320 SUPERFAMILY SSF55120 92 317 2.08E-57 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS06215 0ef956565cb5011e5da56d69cf4700d4 320 Gene3D G3DSA:3.10.290.10 23 71 7.2E-6 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS06215 0ef956565cb5011e5da56d69cf4700d4 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 13-09-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS06215 0ef956565cb5011e5da56d69cf4700d4 320 SUPERFAMILY SSF55174 22 74 2.35E-8 T 13-09-2016 PMA3_RS06215 0ef956565cb5011e5da56d69cf4700d4 320 PANTHER PTHR11079:SF84 8 316 1.4E-133 T 13-09-2016 PMA3_RS06215 0ef956565cb5011e5da56d69cf4700d4 320 PANTHER PTHR11079 8 316 1.4E-133 T 13-09-2016 PMA3_RS30115 847dc2cd387d0665d7e2a4c06ac63526 239 Pfam PF00072 Response regulator receiver domain 3 119 3.4E-22 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS30115 847dc2cd387d0665d7e2a4c06ac63526 239 PANTHER PTHR26402:SF405 1 234 4.3E-94 T 13-09-2016 PMA3_RS30115 847dc2cd387d0665d7e2a4c06ac63526 239 SMART SM00862 155 231 2.8E-19 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS30115 847dc2cd387d0665d7e2a4c06ac63526 239 Gene3D G3DSA:1.10.10.10 133 232 2.0E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS30115 847dc2cd387d0665d7e2a4c06ac63526 239 SUPERFAMILY SSF52172 1 180 4.98E-32 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS30115 847dc2cd387d0665d7e2a4c06ac63526 239 Gene3D G3DSA:3.40.50.2300 1 131 1.3E-31 T 13-09-2016 PMA3_RS30115 847dc2cd387d0665d7e2a4c06ac63526 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 1.5E-18 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS30115 847dc2cd387d0665d7e2a4c06ac63526 239 PANTHER PTHR26402 1 234 4.3E-94 T 13-09-2016 PMA3_RS30115 847dc2cd387d0665d7e2a4c06ac63526 239 SMART SM00448 1 119 4.2E-30 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 Pfam PF08245 Mur ligase middle domain 121 301 6.8E-28 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 411 1.6E-21 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 Gene3D G3DSA:3.90.190.20 323 469 3.1E-54 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 16 473 43.794 T 13-09-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 SUPERFAMILY SSF53623 102 319 5.23E-74 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 PANTHER PTHR23135 11 461 2.6E-223 T 13-09-2016 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 467 6.4E-169 T 13-09-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 SUPERFAMILY SSF53244 320 469 4.21E-48 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 Pfam PF01225 Mur ligase family, catalytic domain 18 116 1.7E-26 T 13-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 PANTHER PTHR23135:SF5 11 461 2.6E-223 T 13-09-2016 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 Gene3D G3DSA:3.40.50.720 17 103 2.7E-35 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 SUPERFAMILY SSF51984 17 103 9.42E-29 T 13-09-2016 PMA3_RS04150 16196d185367f400c25b3100feef1fb6 486 Gene3D G3DSA:3.40.1190.10 105 322 5.4E-83 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS26650 34d3a415285b193c85157368df024189 238 PANTHER PTHR30249 1 236 8.7E-92 T 13-09-2016 PMA3_RS26650 34d3a415285b193c85157368df024189 238 Pfam PF04172 LrgB-like family 23 235 1.2E-72 T 13-09-2016 IPR007300 CidB/LrgB family PMA3_RS26650 34d3a415285b193c85157368df024189 238 PANTHER PTHR30249:SF5 1 236 8.7E-92 T 13-09-2016 PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 Gene3D G3DSA:3.40.50.300 1 266 1.5E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 Gene3D G3DSA:3.40.50.300 310 526 3.2E-42 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 SUPERFAMILY SSF52540 296 524 1.13E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 SMART SM00382 26 223 4.5E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 SMART SM00382 337 502 1.1E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 PANTHER PTHR19211:SF49 1 554 0.0 T 13-09-2016 PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 Pfam PF12848 ABC transporter 218 294 1.2E-26 T 13-09-2016 IPR032781 ABC-transporter extension domain PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 SUPERFAMILY SSF52540 119 256 5.49E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 SUPERFAMILY SSF52540 2 92 5.49E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 PANTHER PTHR19211 1 554 0.0 T 13-09-2016 PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 Pfam PF00005 ABC transporter 17 178 9.5E-23 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 Pfam PF00005 ABC transporter 328 459 3.1E-22 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS29190 d4459919eaa15bb7536ac5c1c3be20bc 636 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS01285 9401bea5a68931c61958f6b044169b19 276 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS01285 9401bea5a68931c61958f6b044169b19 276 PANTHER PTHR24220:SF374 10 20 8.7E-153 T 13-09-2016 PMA3_RS01285 9401bea5a68931c61958f6b044169b19 276 Pfam PF00005 ABC transporter 49 196 8.6E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS01285 9401bea5a68931c61958f6b044169b19 276 PANTHER PTHR24220 10 20 8.7E-153 T 13-09-2016 PMA3_RS01285 9401bea5a68931c61958f6b044169b19 276 SUPERFAMILY SSF52540 42 271 9.4E-74 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01285 9401bea5a68931c61958f6b044169b19 276 SMART SM00382 57 245 2.8E-18 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS01285 9401bea5a68931c61958f6b044169b19 276 PANTHER PTHR24220:SF374 45 271 8.7E-153 T 13-09-2016 PMA3_RS01285 9401bea5a68931c61958f6b044169b19 276 PANTHER PTHR24220 45 271 8.7E-153 T 13-09-2016 PMA3_RS01285 9401bea5a68931c61958f6b044169b19 276 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 41 271 1.7E-111 T 13-09-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PMA3_RS01285 9401bea5a68931c61958f6b044169b19 276 Gene3D G3DSA:3.40.50.300 9 270 6.4E-75 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 252 3.2E-88 T 13-09-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 PANTHER PTHR20854 1 239 9.0E-72 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 SUPERFAMILY SSF56655 8 249 1.96E-71 T 13-09-2016 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 Pfam PF00459 Inositol monophosphatase family 13 240 4.0E-56 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 Gene3D G3DSA:3.30.540.10 6 155 2.5E-45 T 13-09-2016 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 13-09-2016 IPR020583 Inositol monophosphatase, metal-binding site PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 13-09-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 Gene3D G3DSA:3.40.190.80 156 252 7.3E-36 T 13-09-2016 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 PANTHER PTHR20854:SF5 1 239 9.0E-72 T 13-09-2016 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 2.9E-16 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 2.9E-16 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 2.9E-16 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 2.9E-16 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS11930 be43fbb32e157650a2029540c6ef825b 255 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 2.9E-16 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS29400 76f54aa5b03304a33aa3ce166038aac6 135 PANTHER PTHR40942:SF1 1 135 2.1E-45 T 13-09-2016 PMA3_RS29400 76f54aa5b03304a33aa3ce166038aac6 135 PRINTS PR00607 Class IE cytochrome C signature 76 86 1.4E-19 T 13-09-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PMA3_RS29400 76f54aa5b03304a33aa3ce166038aac6 135 PRINTS PR00607 Class IE cytochrome C signature 121 132 1.4E-19 T 13-09-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PMA3_RS29400 76f54aa5b03304a33aa3ce166038aac6 135 PRINTS PR00607 Class IE cytochrome C signature 65 76 1.4E-19 T 13-09-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PMA3_RS29400 76f54aa5b03304a33aa3ce166038aac6 135 PRINTS PR00607 Class IE cytochrome C signature 106 118 1.4E-19 T 13-09-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PMA3_RS29400 76f54aa5b03304a33aa3ce166038aac6 135 PANTHER PTHR40942 1 135 2.1E-45 T 13-09-2016 PMA3_RS29400 76f54aa5b03304a33aa3ce166038aac6 135 SUPERFAMILY SSF46626 53 132 8.15E-15 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS29400 76f54aa5b03304a33aa3ce166038aac6 135 Gene3D G3DSA:1.10.760.10 55 132 3.7E-28 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS29400 76f54aa5b03304a33aa3ce166038aac6 135 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 54 128 6.7E-11 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS17745 3eee0e8fb5db5bdf7dd884b4cd3d1d47 314 PANTHER PTHR12277 3 295 4.1E-46 T 13-09-2016 PMA3_RS17745 3eee0e8fb5db5bdf7dd884b4cd3d1d47 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 129 2.2E-5 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS17745 3eee0e8fb5db5bdf7dd884b4cd3d1d47 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 161 174 2.2E-5 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS17745 3eee0e8fb5db5bdf7dd884b4cd3d1d47 314 Pfam PF12146 Serine aminopeptidase, S33 89 206 5.4E-15 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS17745 3eee0e8fb5db5bdf7dd884b4cd3d1d47 314 Gene3D G3DSA:3.40.50.1820 69 280 1.4E-39 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS17745 3eee0e8fb5db5bdf7dd884b4cd3d1d47 314 SUPERFAMILY SSF53474 11 291 2.08E-42 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS20895 1d3c61df367f2a54aa389ae1e0d18db1 153 SUPERFAMILY SSF51161 12 152 5.3E-43 T 13-09-2016 IPR011004 Trimeric LpxA-like PMA3_RS20895 1d3c61df367f2a54aa389ae1e0d18db1 153 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 99 131 3.7E-7 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS20895 1d3c61df367f2a54aa389ae1e0d18db1 153 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 46 2.3E-6 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS20895 1d3c61df367f2a54aa389ae1e0d18db1 153 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 107 135 - T 13-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 PMA3_RS20895 1d3c61df367f2a54aa389ae1e0d18db1 153 Gene3D G3DSA:2.160.10.10 11 152 3.4E-43 T 13-09-2016 PMA3_RS20895 1d3c61df367f2a54aa389ae1e0d18db1 153 PANTHER PTHR23416:SF53 1 153 1.6E-41 T 13-09-2016 PMA3_RS20895 1d3c61df367f2a54aa389ae1e0d18db1 153 PANTHER PTHR23416 1 153 1.6E-41 T 13-09-2016 PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 PANTHER PTHR11695:SF558 18 335 5.4E-129 T 13-09-2016 PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 SUPERFAMILY SSF50129 16 146 5.02E-32 T 13-09-2016 IPR011032 GroES-like PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 Gene3D G3DSA:3.90.180.10 1 155 6.1E-37 T 13-09-2016 IPR011032 GroES-like PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 2.1E-23 T 13-09-2016 PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 SUPERFAMILY SSF51735 117 287 8.16E-35 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 3.6E-171 T 13-09-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 13-09-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 Gene3D G3DSA:3.40.50.720 156 247 6.0E-16 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 PANTHER PTHR11695 18 335 5.4E-129 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 SMART SM00829 16 334 1.6E-11 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS26505 239437b25d14e2f391bc8db437e17c91 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 91 4.1E-7 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 SUPERFAMILY SSF50447 515 597 5.41E-26 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 95 7.2E-10 T 13-09-2016 IPR013575 Initiation factor 2 associated domain, bacterial PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 Gene3D G3DSA:3.40.50.10050 642 721 5.7E-21 T 13-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 PANTHER PTHR23115 695 842 3.1E-204 T 13-09-2016 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 Gene3D G3DSA:3.40.50.300 342 502 1.5E-45 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 SUPERFAMILY SSF50447 744 840 2.55E-31 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 Gene3D G3DSA:2.40.30.10 744 840 9.0E-36 T 13-09-2016 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 PANTHER PTHR23115:SF184 327 670 3.1E-204 T 13-09-2016 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 PANTHER PTHR23115:SF184 695 842 3.1E-204 T 13-09-2016 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 PANTHER PTHR23115 327 670 3.1E-204 T 13-09-2016 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 SUPERFAMILY SSF52156 623 749 9.42E-34 T 13-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 267 317 4.0E-16 T 13-09-2016 IPR006847 Translation initiation factor IF-2, N-terminal PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 Gene3D G3DSA:3.30.56.50 2 51 3.2E-22 T 13-09-2016 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 345 501 3.5E-30 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 261 841 2.0E-258 T 13-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 840 17.206 T 13-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 ProSitePatterns PS01176 Initiation factor 2 signature. 793 815 - T 13-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 Pfam PF11987 Translation-initiation factor 2 627 732 6.4E-34 T 13-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 SUPERFAMILY SSF52540 334 512 1.32E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 Pfam PF00009 Elongation factor Tu GTP binding domain 346 503 1.3E-34 T 13-09-2016 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 Gene3D G3DSA:2.40.30.10 513 606 1.6E-26 T 13-09-2016 PMA3_RS25490 bd62e778215d383e96b7f1a09fefa516 842 SUPERFAMILY SSF46955 3 51 4.21E-11 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 SUPERFAMILY SSF54631 307 354 8.05E-7 T 13-09-2016 PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 PANTHER PTHR24220:SF374 50 280 8.0E-139 T 13-09-2016 PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 PANTHER PTHR24220:SF374 14 24 8.0E-139 T 13-09-2016 PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 PANTHER PTHR24220 14 24 8.0E-139 T 13-09-2016 PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 Pfam PF00005 ABC transporter 54 201 7.3E-33 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 PANTHER PTHR24220 50 280 8.0E-139 T 13-09-2016 PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 Gene3D G3DSA:3.10.580.10 273 351 2.1E-6 T 13-09-2016 PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 Gene3D G3DSA:3.40.50.300 50 272 2.6E-76 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 SMART SM00382 62 251 3.1E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 Pfam PF00571 CBS domain 308 350 2.3E-7 T 13-09-2016 IPR000644 CBS domain PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 SUPERFAMILY SSF52540 52 280 3.01E-74 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19340 1e1869d32f94959998b2472753a23039 372 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 48 347 1.1E-106 T 13-09-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PMA3_RS24165 1117a3dbb5444e7ab3c72de7f6b35c44 459 PANTHER PTHR30008:SF0 8 458 4.2E-174 T 13-09-2016 PMA3_RS24165 1117a3dbb5444e7ab3c72de7f6b35c44 459 PANTHER PTHR30008 8 458 4.2E-174 T 13-09-2016 PMA3_RS24165 1117a3dbb5444e7ab3c72de7f6b35c44 459 Pfam PF02601 Exonuclease VII, large subunit 132 443 4.9E-98 T 13-09-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 PMA3_RS24165 1117a3dbb5444e7ab3c72de7f6b35c44 459 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 13 446 31.178 T 13-09-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PMA3_RS24165 1117a3dbb5444e7ab3c72de7f6b35c44 459 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 17 358 5.6E-129 T 13-09-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PMA3_RS24165 1117a3dbb5444e7ab3c72de7f6b35c44 459 Pfam PF13742 OB-fold nucleic acid binding domain 16 108 2.5E-28 T 13-09-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 PMA3_RS09480 6c5f30cabf1985c0b6d95c6f6a950364 262 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS09480 6c5f30cabf1985c0b6d95c6f6a950364 262 PIRSF PIRSF039085 19 262 1.2E-107 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS09480 6c5f30cabf1985c0b6d95c6f6a950364 262 Gene3D G3DSA:3.40.50.300 22 257 6.6E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09480 6c5f30cabf1985c0b6d95c6f6a950364 262 PANTHER PTHR24220 24 261 7.9E-152 T 13-09-2016 PMA3_RS09480 6c5f30cabf1985c0b6d95c6f6a950364 262 SUPERFAMILY SSF52540 23 256 1.73E-78 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09480 6c5f30cabf1985c0b6d95c6f6a950364 262 SMART SM00382 47 234 1.6E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS09480 6c5f30cabf1985c0b6d95c6f6a950364 262 Pfam PF00005 ABC transporter 38 186 6.6E-39 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS09480 6c5f30cabf1985c0b6d95c6f6a950364 262 PANTHER PTHR24220:SF474 24 261 7.9E-152 T 13-09-2016 PMA3_RS08250 381570235d1e2053e06c01031efa12ef 371 Gene3D G3DSA:3.50.50.60 138 216 2.5E-60 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08250 381570235d1e2053e06c01031efa12ef 371 Gene3D G3DSA:3.50.50.60 3 80 2.5E-60 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08250 381570235d1e2053e06c01031efa12ef 371 Gene3D G3DSA:3.50.50.60 308 366 2.5E-60 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08250 381570235d1e2053e06c01031efa12ef 371 PANTHER PTHR13847 2 366 2.5E-63 T 13-09-2016 PMA3_RS08250 381570235d1e2053e06c01031efa12ef 371 SUPERFAMILY SSF51905 4 217 2.16E-59 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08250 381570235d1e2053e06c01031efa12ef 371 SUPERFAMILY SSF51905 308 365 2.16E-59 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08250 381570235d1e2053e06c01031efa12ef 371 Gene3D G3DSA:3.30.9.10 217 304 3.7E-11 T 13-09-2016 PMA3_RS08250 381570235d1e2053e06c01031efa12ef 371 Gene3D G3DSA:3.30.9.10 85 137 3.7E-11 T 13-09-2016 PMA3_RS08250 381570235d1e2053e06c01031efa12ef 371 SUPERFAMILY SSF54373 229 305 1.96E-6 T 13-09-2016 PMA3_RS08250 381570235d1e2053e06c01031efa12ef 371 Pfam PF01266 FAD dependent oxidoreductase 5 347 2.3E-64 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 SMART SM00091 185 251 1.3E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 Pfam PF00990 Diguanylate cyclase, GGDEF domain 308 465 2.8E-47 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 SUPERFAMILY SSF141868 485 732 8.5E-95 T 13-09-2016 IPR001633 EAL domain PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 PANTHER PTHR33121 429 733 4.7E-87 T 13-09-2016 PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 PANTHER PTHR33121 275 286 4.7E-87 T 13-09-2016 PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 SMART SM00065 29 181 7.3E-11 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 SMART SM00267 297 469 2.7E-58 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 Gene3D G3DSA:3.20.20.450 483 732 1.3E-101 T 13-09-2016 IPR001633 EAL domain PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 Gene3D G3DSA:3.30.70.270 310 477 4.8E-56 T 13-09-2016 PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 PANTHER PTHR33121:SF13 275 286 4.7E-87 T 13-09-2016 PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 Pfam PF13185 GAF domain 30 171 2.1E-13 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 Gene3D G3DSA:3.30.450.40 18 182 1.3E-20 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 SUPERFAMILY SSF55785 177 295 6.63E-20 T 13-09-2016 IPR000014 PAS domain PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 181 304 1.4E-19 T 13-09-2016 IPR000014 PAS domain PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 SMART SM00052 479 725 2.1E-122 T 13-09-2016 IPR001633 EAL domain PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 Pfam PF08448 PAS fold 195 298 3.1E-11 T 13-09-2016 IPR013656 PAS fold-4 PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 Pfam PF00563 EAL domain 485 720 4.0E-78 T 13-09-2016 IPR001633 EAL domain PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 SUPERFAMILY SSF55781 15 171 2.4E-24 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 305 467 5.8E-43 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 Gene3D G3DSA:3.30.450.20 183 295 9.6E-22 T 13-09-2016 PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 SUPERFAMILY SSF55073 313 471 8.63E-49 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS16080 6dabd23b1149c3b02251b0b5cd0120a0 740 PANTHER PTHR33121:SF13 429 733 4.7E-87 T 13-09-2016 PMA3_RS13165 df11f73530353dfde87f638030147d70 319 PANTHER PTHR11358 4 313 3.5E-94 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS13165 df11f73530353dfde87f638030147d70 319 ProSitePatterns PS01053 Arginase family signature. 239 260 - T 13-09-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 PMA3_RS13165 df11f73530353dfde87f638030147d70 319 Gene3D G3DSA:3.40.800.10 21 316 1.4E-108 T 13-09-2016 IPR023696 Ureohydrolase domain PMA3_RS13165 df11f73530353dfde87f638030147d70 319 Pfam PF00491 Arginase family 44 308 9.3E-91 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS13165 df11f73530353dfde87f638030147d70 319 PIRSF PIRSF036979 22 315 3.3E-96 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS13165 df11f73530353dfde87f638030147d70 319 SUPERFAMILY SSF52768 23 313 4.86E-95 T 13-09-2016 PMA3_RS13165 df11f73530353dfde87f638030147d70 319 TIGRFAM TIGR01230 agmatinase: agmatinase 43 309 1.1E-74 T 13-09-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 PMA3_RS12280 139d279b5523e893cb6fc839ae2348d4 332 SMART SM00382 30 187 5.0E-6 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS12280 139d279b5523e893cb6fc839ae2348d4 332 Pfam PF07728 AAA domain (dynein-related subfamily) 33 163 1.8E-12 T 13-09-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PMA3_RS12280 139d279b5523e893cb6fc839ae2348d4 332 Gene3D G3DSA:1.10.8.80 216 294 3.1E-27 T 13-09-2016 PMA3_RS12280 139d279b5523e893cb6fc839ae2348d4 332 PANTHER PTHR32039 7 306 6.7E-106 T 13-09-2016 PMA3_RS12280 139d279b5523e893cb6fc839ae2348d4 332 PANTHER PTHR32039:SF10 7 306 6.7E-106 T 13-09-2016 PMA3_RS12280 139d279b5523e893cb6fc839ae2348d4 332 Gene3D G3DSA:3.40.50.300 5 167 4.6E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12280 139d279b5523e893cb6fc839ae2348d4 332 SUPERFAMILY SSF52540 5 290 8.89E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29900 43a32340b10108f3afb339872af1a215 402 Gene3D G3DSA:3.40.50.300 3 229 6.0E-72 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29900 43a32340b10108f3afb339872af1a215 402 PANTHER PTHR13748 3 331 2.6E-189 T 13-09-2016 PMA3_RS29900 43a32340b10108f3afb339872af1a215 402 PANTHER PTHR13748 347 387 2.6E-189 T 13-09-2016 PMA3_RS29900 43a32340b10108f3afb339872af1a215 402 Gene3D G3DSA:3.30.1220.10 242 373 4.0E-16 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS29900 43a32340b10108f3afb339872af1a215 402 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 210 2.7E-55 T 13-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS29900 43a32340b10108f3afb339872af1a215 402 PANTHER PTHR13748:SF4 3 331 2.6E-189 T 13-09-2016 PMA3_RS29900 43a32340b10108f3afb339872af1a215 402 PANTHER PTHR13748:SF4 347 387 2.6E-189 T 13-09-2016 PMA3_RS29900 43a32340b10108f3afb339872af1a215 402 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 373 2.9E-27 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS29900 43a32340b10108f3afb339872af1a215 402 SMART SM00833 256 373 3.6E-42 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS29900 43a32340b10108f3afb339872af1a215 402 SUPERFAMILY SSF52540 2 310 1.68E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 SUPERFAMILY SSF52374 4 308 1.37E-110 T 13-09-2016 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 SUPERFAMILY SSF48163 314 471 1.57E-35 T 13-09-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 PANTHER PTHR11451:SF41 4 333 9.0E-105 T 13-09-2016 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 13-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 4 471 30.554 T 13-09-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 Gene3D G3DSA:1.10.1160.10 246 329 1.7E-32 T 13-09-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 Gene3D G3DSA:3.40.50.620 195 244 2.1E-46 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 Gene3D G3DSA:3.40.50.620 3 68 2.1E-46 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 470 6.4E-139 T 13-09-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 Gene3D G3DSA:3.90.800.10 69 194 2.2E-41 T 13-09-2016 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 PANTHER PTHR11451 4 333 9.0E-105 T 13-09-2016 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 Gene3D G3DSA:1.10.10.350 372 471 3.3E-13 T 13-09-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 203 8.8E-23 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 217 8.8E-23 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 8.8E-23 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 8.8E-23 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 8.8E-23 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS08915 02be27c48ff4c55385bfcd76d046b214 493 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 320 2.1E-110 T 13-09-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 PIRSF PIRSF001109 2 469 5.0E-183 T 13-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 199 381 1.0E-56 T 13-09-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 SMART SM00996 12 468 3.2E-272 T 13-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 Gene3D G3DSA:3.40.50.1480 382 469 1.1E-127 T 13-09-2016 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 Gene3D G3DSA:3.40.50.1480 12 200 1.1E-127 T 13-09-2016 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 SUPERFAMILY SSF52283 10 198 1.59E-105 T 13-09-2016 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 SUPERFAMILY SSF52283 382 469 1.59E-105 T 13-09-2016 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 SMART SM00997 199 381 1.4E-81 T 13-09-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 PANTHER PTHR23420 4 469 5.8E-303 T 13-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 SUPERFAMILY SSF51735 199 381 4.86E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 Gene3D G3DSA:3.40.50.720 201 380 1.6E-43 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 13-09-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 461 1.3E-150 T 13-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 149 1.6E-70 T 13-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PMA3_RS28275 dba31a4664e35f1cae0f0ce0f4e7cd45 469 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 221 237 - T 13-09-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 SUPERFAMILY SSF47789 250 323 8.89E-26 T 13-09-2016 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 307 4.4E-24 T 13-09-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 Gene3D G3DSA:1.10.150.20 244 326 9.0E-37 T 13-09-2016 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 SUPERFAMILY SSF55257 6 53 1.67E-29 T 13-09-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 SUPERFAMILY SSF55257 178 232 1.67E-29 T 13-09-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 4.0E-23 T 13-09-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 Gene3D G3DSA:3.30.1360.10 11 65 2.2E-9 T 13-09-2016 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 35.11 T 13-09-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 328 1.0E-36 T 13-09-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 155 4.6E-26 T 13-09-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 3.3E-110 T 13-09-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 PANTHER PTHR32108:SF0 1 329 2.5E-152 T 13-09-2016 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 PANTHER PTHR32108 1 329 2.5E-152 T 13-09-2016 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 SMART SM00662 23 233 5.2E-109 T 13-09-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 SUPERFAMILY SSF56553 53 177 1.31E-42 T 13-09-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27145 abd8de67583846d2fb71edc358a18222 333 Gene3D G3DSA:2.170.120.12 66 176 6.1E-43 T 13-09-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27175 d67e642a6211bcb91af66e08d5d057d4 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.261 T 13-09-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PMA3_RS27175 d67e642a6211bcb91af66e08d5d057d4 58 PIRSF PIRSF002211 1 58 1.8E-22 T 13-09-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PMA3_RS27175 d67e642a6211bcb91af66e08d5d057d4 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 57 9.1E-19 T 13-09-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PMA3_RS27175 d67e642a6211bcb91af66e08d5d057d4 58 Gene3D G3DSA:3.30.1390.20 1 57 1.6E-24 T 13-09-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PMA3_RS27175 d67e642a6211bcb91af66e08d5d057d4 58 SUPERFAMILY SSF55129 1 57 9.29E-19 T 13-09-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PMA3_RS27175 d67e642a6211bcb91af66e08d5d057d4 58 PANTHER PTHR15892 1 57 2.4E-22 T 13-09-2016 PMA3_RS27175 d67e642a6211bcb91af66e08d5d057d4 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 50 2.7E-16 T 13-09-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 Pfam PF14697 4Fe-4S dicluster domain 338 400 1.1E-22 T 13-09-2016 PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 382 393 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 SUPERFAMILY SSF54862 321 401 1.97E-13 T 13-09-2016 PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 Gene3D G3DSA:3.20.20.70 5 311 6.0E-77 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 345 356 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 Gene3D G3DSA:3.30.70.20 326 406 2.6E-16 T 13-09-2016 PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 5 320 1.2E-49 T 13-09-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 SUPERFAMILY SSF51395 1 321 1.2E-74 T 13-09-2016 PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 PANTHER PTHR11938:SF102 3 405 2.2E-85 T 13-09-2016 PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 Pfam PF01180 Dihydroorotate dehydrogenase 7 305 2.9E-28 T 13-09-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PMA3_RS15580 7b3247fa3c6d2998d91b5ec7d81b6ec2 424 PANTHER PTHR11938 3 405 2.2E-85 T 13-09-2016 PMA3_RS05630 31cbee8a766fef1941812d02e88864b3 339 TIGRFAM TIGR03245 arg_AOST_alph: arginine/ornithine succinyltransferase, alpha subunit 3 339 1.2E-166 T 13-09-2016 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS05630 31cbee8a766fef1941812d02e88864b3 339 PANTHER PTHR30420 1 339 5.7E-238 T 13-09-2016 PMA3_RS05630 31cbee8a766fef1941812d02e88864b3 339 Gene3D G3DSA:2.40.40.20 274 339 2.4E-28 T 13-09-2016 PMA3_RS05630 31cbee8a766fef1941812d02e88864b3 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 1.1E-125 T 13-09-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS05630 31cbee8a766fef1941812d02e88864b3 339 PANTHER PTHR30420:SF3 1 339 5.7E-238 T 13-09-2016 PMA3_RS05630 31cbee8a766fef1941812d02e88864b3 339 SUPERFAMILY SSF55729 1 338 2.77E-119 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS05630 31cbee8a766fef1941812d02e88864b3 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 1.7E-134 T 13-09-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 SUPERFAMILY SSF82714 187 267 1.02E-11 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 SUPERFAMILY SSF82693 141 184 1.2E-15 T 13-09-2016 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 SUPERFAMILY SSF82693 270 325 1.2E-15 T 13-09-2016 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 Pfam PF00873 AcrB/AcrD/AcrF family 7 1013 8.3E-167 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 SUPERFAMILY SSF82693 42 136 4.71E-19 T 13-09-2016 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 SUPERFAMILY SSF82866 796 1019 1.28E-45 T 13-09-2016 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.4E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.4E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.4E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 547 564 3.4E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.4E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.4E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 PANTHER PTHR32063:SF18 3 1021 0.0 T 13-09-2016 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 Gene3D G3DSA:3.30.2090.10 715 800 5.0E-13 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 Gene3D G3DSA:3.30.2090.10 188 267 5.4E-13 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 SUPERFAMILY SSF82866 306 487 3.01E-35 T 13-09-2016 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 Gene3D G3DSA:1.20.1640.10 289 488 1.9E-39 T 13-09-2016 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 Gene3D G3DSA:3.30.70.1430 42 138 5.3E-20 T 13-09-2016 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 SUPERFAMILY SSF82714 714 800 2.35E-13 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 Gene3D G3DSA:1.10.3850.10 804 1017 9.4E-51 T 13-09-2016 PMA3_RS04715 c728ed9f4d4c70ba44dac082ec2ac0bd 1023 PANTHER PTHR32063 3 1021 0.0 T 13-09-2016 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 ProSitePatterns PS00116 DNA polymerase family B signature. 545 553 - T 13-09-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 SUPERFAMILY SSF53098 5 391 2.39E-89 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 SUPERFAMILY SSF56672 386 782 5.56E-113 T 13-09-2016 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 Gene3D G3DSA:3.30.420.10 151 367 3.3E-37 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 198 298 3.8E-7 T 13-09-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 SMART SM00486 151 557 4.2E-66 T 13-09-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 Pfam PF00136 DNA polymerase family B 378 739 4.5E-40 T 13-09-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 543 551 7.1E-10 T 13-09-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 491 503 7.1E-10 T 13-09-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 7.1E-10 T 13-09-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 Gene3D G3DSA:3.90.1600.10 394 433 7.9E-11 T 13-09-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 Gene3D G3DSA:3.90.1600.10 514 563 7.9E-11 T 13-09-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS07925 f77e956b39456ca38bacf5e00bd1adbe 787 PANTHER PTHR10322 75 787 1.4E-200 T 13-09-2016 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 PRINTS PR00067 Catalase signature 120 138 7.8E-71 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 PRINTS PR00067 Catalase signature 141 158 7.8E-71 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 PRINTS PR00067 Catalase signature 329 356 7.8E-71 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 PRINTS PR00067 Catalase signature 57 80 7.8E-71 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 PRINTS PR00067 Catalase signature 361 387 7.8E-71 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 PRINTS PR00067 Catalase signature 160 178 7.8E-71 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 Pfam PF00199 Catalase 45 429 5.8E-180 T 13-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 ProSitePatterns PS00438 Catalase proximal active site signature. 80 96 - T 13-09-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 SUPERFAMILY SSF56634 20 533 6.02E-221 T 13-09-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 Pfam PF01965 DJ-1/PfpI family 562 668 6.7E-9 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS00045 64031127fd726970701145dbde5951ec 713 PANTHER PTHR11465 23 595 0.0 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 SMART SM01060 44 432 1.2E-274 T 13-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 Gene3D G3DSA:3.40.50.880 561 713 4.7E-52 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS00045 64031127fd726970701145dbde5951ec 713 SUPERFAMILY SSF52317 559 704 3.47E-20 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS00045 64031127fd726970701145dbde5951ec 713 Pfam PF06628 Catalase-related immune-responsive 461 526 8.4E-20 T 13-09-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 374 382 - T 13-09-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 PANTHER PTHR11465:SF7 23 595 0.0 T 13-09-2016 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 PIRSF PIRSF038927 7 711 0.0 T 13-09-2016 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS00045 64031127fd726970701145dbde5951ec 713 Gene3D G3DSA:2.40.180.10 25 399 1.2E-182 T 13-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS18770 5157ccf769ac032f1437238655679773 443 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 428 3.2E-171 T 13-09-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PMA3_RS18770 5157ccf769ac032f1437238655679773 443 PIRSF PIRSF000337 2 443 2.1E-164 T 13-09-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PMA3_RS18770 5157ccf769ac032f1437238655679773 443 Pfam PF00296 Luciferase-like monooxygenase 20 384 8.6E-62 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS18770 5157ccf769ac032f1437238655679773 443 Gene3D G3DSA:3.20.20.30 2 304 4.4E-135 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS18770 5157ccf769ac032f1437238655679773 443 Gene3D G3DSA:3.20.20.30 346 434 4.4E-135 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS18770 5157ccf769ac032f1437238655679773 443 PANTHER PTHR30011:SF18 1 438 1.4E-182 T 13-09-2016 PMA3_RS18770 5157ccf769ac032f1437238655679773 443 PANTHER PTHR30011 1 438 1.4E-182 T 13-09-2016 PMA3_RS18770 5157ccf769ac032f1437238655679773 443 SUPERFAMILY SSF51679 3 434 3.27E-130 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS00495 17d082a4c740e169f1b9a1878a72dc96 569 Pfam PF12034 Domain of unknown function (DUF3520) 375 553 2.8E-68 T 13-09-2016 IPR021908 Protein of unknown function DUF3520 PMA3_RS00495 17d082a4c740e169f1b9a1878a72dc96 569 PANTHER PTHR10166:SF15 194 465 4.9E-106 T 13-09-2016 PMA3_RS00495 17d082a4c740e169f1b9a1878a72dc96 569 Pfam PF00092 von Willebrand factor type A domain 199 363 9.4E-23 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS00495 17d082a4c740e169f1b9a1878a72dc96 569 SUPERFAMILY SSF53300 196 368 1.83E-38 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS00495 17d082a4c740e169f1b9a1878a72dc96 569 Pfam PF12450 von Willebrand factor 90 182 1.1E-38 T 13-09-2016 IPR022156 Uncharacterised protein YfbK, N-terminal PMA3_RS00495 17d082a4c740e169f1b9a1878a72dc96 569 SMART SM00327 197 374 1.5E-28 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS00495 17d082a4c740e169f1b9a1878a72dc96 569 Gene3D G3DSA:3.40.50.410 196 371 2.1E-26 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS00495 17d082a4c740e169f1b9a1878a72dc96 569 PANTHER PTHR10166 194 465 4.9E-106 T 13-09-2016 PMA3_RS19115 f75626de7182cb24fed4b3f5a319f073 325 SUPERFAMILY SSF56784 50 262 3.14E-16 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS19115 f75626de7182cb24fed4b3f5a319f073 325 Gene3D G3DSA:3.40.50.1000 148 268 1.5E-11 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS19115 f75626de7182cb24fed4b3f5a319f073 325 Gene3D G3DSA:3.40.50.1000 51 65 1.5E-11 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS19115 f75626de7182cb24fed4b3f5a319f073 325 Pfam PF12710 haloacid dehalogenase-like hydrolase 52 257 8.9E-16 T 13-09-2016 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 SUPERFAMILY SSF53738 25 236 1.92E-48 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 PANTHER PTHR22573 18 545 4.9E-252 T 13-09-2016 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 478 537 7.4E-10 T 13-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 SUPERFAMILY SSF53738 306 448 3.49E-32 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 SUPERFAMILY SSF55957 435 546 1.57E-20 T 13-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 Gene3D G3DSA:3.40.120.10 227 311 1.8E-43 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 141 150 - T 13-09-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 545 9.7E-266 T 13-09-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 4.8E-34 T 13-09-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 Gene3D G3DSA:3.30.310.50 468 545 9.6E-29 T 13-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 PANTHER PTHR22573:SF52 18 545 4.9E-252 T 13-09-2016 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 439 4.5E-28 T 13-09-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 Gene3D G3DSA:3.40.120.10 312 446 1.0E-33 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 Gene3D G3DSA:3.40.120.10 31 226 9.7E-58 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS13655 807dc53cc7f3f85a03609ac6069e05c7 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 211 318 4.4E-14 T 13-09-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS07295 40857e9a2b4733a2e10e582fbd284895 226 PANTHER PTHR26402:SF399 1 219 2.8E-86 T 13-09-2016 PMA3_RS07295 40857e9a2b4733a2e10e582fbd284895 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.0E-21 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS07295 40857e9a2b4733a2e10e582fbd284895 226 SMART SM00448 1 112 1.6E-35 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07295 40857e9a2b4733a2e10e582fbd284895 226 Pfam PF00072 Response regulator receiver domain 3 112 1.8E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07295 40857e9a2b4733a2e10e582fbd284895 226 Gene3D G3DSA:3.40.50.2300 1 120 4.1E-34 T 13-09-2016 PMA3_RS07295 40857e9a2b4733a2e10e582fbd284895 226 Gene3D G3DSA:1.10.10.10 125 217 8.8E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07295 40857e9a2b4733a2e10e582fbd284895 226 SUPERFAMILY SSF52172 1 172 9.23E-37 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS07295 40857e9a2b4733a2e10e582fbd284895 226 SMART SM00862 145 216 8.7E-25 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS07295 40857e9a2b4733a2e10e582fbd284895 226 PANTHER PTHR26402 1 219 2.8E-86 T 13-09-2016 PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 9.8E-19 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 SMART SM00345 16 75 1.1E-20 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 SUPERFAMILY SSF48008 106 231 7.32E-25 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 Gene3D G3DSA:1.10.10.10 13 87 9.7E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 PANTHER PTHR11751 15 78 1.3E-23 T 13-09-2016 PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 PANTHER PTHR11751 97 120 1.3E-23 T 13-09-2016 PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 Pfam PF07729 FCD domain 106 219 2.0E-21 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.0E-6 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.0E-6 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 SMART SM00895 104 225 1.3E-15 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 SUPERFAMILY SSF46785 6 79 8.17E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15265 975a00b028e0c3640a5d21c89d60e200 238 Gene3D G3DSA:1.20.120.530 105 235 4.8E-25 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS06025 932e0ba833dba31a3235687c0b91d0ae 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 3.5E-7 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS06025 932e0ba833dba31a3235687c0b91d0ae 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.5E-7 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS06025 932e0ba833dba31a3235687c0b91d0ae 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 3.5E-7 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS06025 932e0ba833dba31a3235687c0b91d0ae 284 Pfam PF00561 alpha/beta hydrolase fold 29 151 3.3E-21 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS06025 932e0ba833dba31a3235687c0b91d0ae 284 PANTHER PTHR10992 1 283 6.6E-43 T 13-09-2016 PMA3_RS06025 932e0ba833dba31a3235687c0b91d0ae 284 Gene3D G3DSA:3.40.50.1820 3 275 3.0E-47 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS06025 932e0ba833dba31a3235687c0b91d0ae 284 PANTHER PTHR10992:SF909 1 283 6.6E-43 T 13-09-2016 PMA3_RS06025 932e0ba833dba31a3235687c0b91d0ae 284 SUPERFAMILY SSF53474 7 281 1.21E-44 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS17910 c266a76f5d68afceb09f7ed7066f5b96 117 Gene3D G3DSA:3.10.20.30 22 90 1.2E-4 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS17910 c266a76f5d68afceb09f7ed7066f5b96 117 SUPERFAMILY SSF54292 20 100 2.29E-18 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS17910 c266a76f5d68afceb09f7ed7066f5b96 117 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 98 7.4E-28 T 13-09-2016 PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 308 146.259 T 13-09-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 268 1.2E-64 T 13-09-2016 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 Gene3D G3DSA:3.40.50.720 1 143 2.3E-70 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 SUPERFAMILY SSF51735 1 155 8.86E-25 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 Gene3D G3DSA:3.30.360.10 144 268 1.0E-65 T 13-09-2016 PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 115 1.6E-8 T 13-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 PIRSF PIRSF015689 1 300 2.0E-133 T 13-09-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 SUPERFAMILY SSF55347 131 269 1.05E-59 T 13-09-2016 PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 SMART SM00859 6 121 1.3E-4 T 13-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 PANTHER PTHR41706 1 300 5.4E-118 T 13-09-2016 PMA3_RS11740 df0bd514a7e4c6c50ac34c7c03f36541 308 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 4 293 4.6E-143 T 13-09-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 PMA3_RS10020 7226414d497b4e103c70d93279b378ff 286 SMART SM00382 56 253 4.6E-17 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS10020 7226414d497b4e103c70d93279b378ff 286 PANTHER PTHR24220 9 19 6.5E-146 T 13-09-2016 PMA3_RS10020 7226414d497b4e103c70d93279b378ff 286 PANTHER PTHR24220 44 277 6.5E-146 T 13-09-2016 PMA3_RS10020 7226414d497b4e103c70d93279b378ff 286 Gene3D G3DSA:3.40.50.300 40 268 1.1E-77 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10020 7226414d497b4e103c70d93279b378ff 286 PANTHER PTHR24220:SF374 44 277 6.5E-146 T 13-09-2016 PMA3_RS10020 7226414d497b4e103c70d93279b378ff 286 PANTHER PTHR24220:SF374 9 19 6.5E-146 T 13-09-2016 PMA3_RS10020 7226414d497b4e103c70d93279b378ff 286 Pfam PF00005 ABC transporter 49 195 7.8E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS10020 7226414d497b4e103c70d93279b378ff 286 SUPERFAMILY SSF52540 37 273 9.86E-76 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10020 7226414d497b4e103c70d93279b378ff 286 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 39 284 7.2E-114 T 13-09-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PMA3_RS10020 7226414d497b4e103c70d93279b378ff 286 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS15470 12d39ed5422256cf880347119ce18ccc 206 Pfam PF01810 LysE type translocator 15 202 6.8E-24 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS15470 12d39ed5422256cf880347119ce18ccc 206 PANTHER PTHR30086 1 205 4.2E-79 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS15470 12d39ed5422256cf880347119ce18ccc 206 PIRSF PIRSF006324 1 205 1.9E-50 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS15470 12d39ed5422256cf880347119ce18ccc 206 PANTHER PTHR30086:SF4 1 205 4.2E-79 T 13-09-2016 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 304 326 6.5E-5 T 13-09-2016 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 6.5E-5 T 13-09-2016 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 6.5E-5 T 13-09-2016 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 PANTHER PTHR23023:SF4 6 323 4.8E-67 T 13-09-2016 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 PANTHER PTHR23023 6 323 4.8E-67 T 13-09-2016 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 12 197 2.0E-23 T 13-09-2016 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 Gene3D G3DSA:3.50.50.60 252 276 7.2E-24 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 Gene3D G3DSA:3.50.50.60 146 206 7.2E-24 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 SUPERFAMILY SSF51905 9 206 6.2E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 SUPERFAMILY SSF51735 238 319 4.33E-8 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 SUPERFAMILY SSF51735 159 203 4.33E-8 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 Gene3D G3DSA:3.50.50.60 9 145 2.1E-23 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 Gene3D G3DSA:3.50.50.60 277 356 3.5E-8 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 134 1.3E-10 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 165 189 1.3E-10 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS09470 ff317cc56e75de1af748ab3e409030b3 358 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 1.3E-10 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS02180 1ceead2953915352f4c59536df178888 296 SUPERFAMILY SSF54001 71 276 1.59E-43 T 13-09-2016 PMA3_RS02180 1ceead2953915352f4c59536df178888 296 PANTHER PTHR33490 5 296 7.4E-83 T 13-09-2016 PMA3_RS02180 1ceead2953915352f4c59536df178888 296 Pfam PF01841 Transglutaminase-like superfamily 152 249 3.8E-21 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS02180 1ceead2953915352f4c59536df178888 296 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 84 1.0E-26 T 13-09-2016 IPR013589 Bacterial transglutaminase-like, N-terminal PMA3_RS02180 1ceead2953915352f4c59536df178888 296 Gene3D G3DSA:3.90.260.10 185 256 4.3E-11 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS02180 1ceead2953915352f4c59536df178888 296 SMART SM00460 181 251 1.1E-19 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS02180 1ceead2953915352f4c59536df178888 296 PANTHER PTHR33490:SF6 5 296 7.4E-83 T 13-09-2016 PMA3_RS03735 d256b3493e89a37a5d38cdda7fb71232 200 Gene3D G3DSA:2.170.120.20 100 193 2.1E-31 T 13-09-2016 IPR020057 Ribosomal protein L25, beta domain PMA3_RS03735 d256b3493e89a37a5d38cdda7fb71232 200 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 185 29.672 T 13-09-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PMA3_RS03735 d256b3493e89a37a5d38cdda7fb71232 200 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 183 4.5E-44 T 13-09-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PMA3_RS03735 d256b3493e89a37a5d38cdda7fb71232 200 SUPERFAMILY SSF50715 4 193 4.53E-57 T 13-09-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 PMA3_RS03735 d256b3493e89a37a5d38cdda7fb71232 200 PANTHER PTHR33284 1 200 2.3E-60 T 13-09-2016 PMA3_RS03735 d256b3493e89a37a5d38cdda7fb71232 200 Pfam PF01386 Ribosomal L25p family 6 94 1.2E-26 T 13-09-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PMA3_RS03735 d256b3493e89a37a5d38cdda7fb71232 200 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 97 8.0E-34 T 13-09-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PMA3_RS03735 d256b3493e89a37a5d38cdda7fb71232 200 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 188 4.2E-28 T 13-09-2016 IPR020057 Ribosomal protein L25, beta domain PMA3_RS03735 d256b3493e89a37a5d38cdda7fb71232 200 Gene3D G3DSA:2.40.240.10 3 97 1.1E-32 T 13-09-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 Gene3D G3DSA:3.30.870.10 234 370 2.6E-29 T 13-09-2016 PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 Gene3D G3DSA:3.30.870.10 32 207 3.5E-38 T 13-09-2016 PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 PANTHER PTHR21248:SF5 35 409 1.3E-98 T 13-09-2016 PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 SUPERFAMILY SSF56024 213 373 3.14E-38 T 13-09-2016 PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 PANTHER PTHR21248 35 409 1.3E-98 T 13-09-2016 PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 Hamap MF_01917 Cardiolipin synthase B [clsB]. 29 412 49.078 T 13-09-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 Pfam PF13091 PLD-like domain 53 184 2.4E-13 T 13-09-2016 IPR025202 Phospholipase D-like domain PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 Pfam PF13091 PLD-like domain 243 364 6.8E-26 T 13-09-2016 IPR025202 Phospholipase D-like domain PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 SUPERFAMILY SSF56024 30 190 5.97E-37 T 13-09-2016 PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 SMART SM00155 314 341 23.0 T 13-09-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PMA3_RS27050 9a6350d160e149a001323b0140b524f1 427 SMART SM00155 135 162 7.0E-6 T 13-09-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PMA3_RS10810 4c81268d45f651615cd8bc2daeb3f31a 227 Gene3D G3DSA:3.40.50.2300 2 122 1.9E-33 T 13-09-2016 PMA3_RS10810 4c81268d45f651615cd8bc2daeb3f31a 227 Pfam PF00072 Response regulator receiver domain 4 113 7.4E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS10810 4c81268d45f651615cd8bc2daeb3f31a 227 SMART SM00862 148 223 1.7E-26 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS10810 4c81268d45f651615cd8bc2daeb3f31a 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 3.5E-25 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS10810 4c81268d45f651615cd8bc2daeb3f31a 227 PANTHER PTHR26402 2 227 5.7E-85 T 13-09-2016 PMA3_RS10810 4c81268d45f651615cd8bc2daeb3f31a 227 PANTHER PTHR26402:SF578 2 227 5.7E-85 T 13-09-2016 PMA3_RS10810 4c81268d45f651615cd8bc2daeb3f31a 227 SMART SM00448 2 113 4.2E-33 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS10810 4c81268d45f651615cd8bc2daeb3f31a 227 Gene3D G3DSA:1.10.10.10 125 225 9.9E-33 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10810 4c81268d45f651615cd8bc2daeb3f31a 227 SUPERFAMILY SSF52172 1 182 1.89E-34 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 Gene3D G3DSA:3.40.1690.10 219 358 2.9E-60 T 13-09-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 SUPERFAMILY SSF160544 245 352 1.31E-39 T 13-09-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 PANTHER PTHR30531 1 362 1.7E-193 T 13-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 3.6E-35 T 13-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 3.6E-35 T 13-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 3.6E-35 T 13-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 3.6E-35 T 13-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 3.6E-35 T 13-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 2.5E-121 T 13-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 354 4.2E-121 T 13-09-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 PMA3_RS21650 3291e730940a9ae6e4c2918ffec89bf4 379 PANTHER PTHR30531:SF4 1 362 1.7E-193 T 13-09-2016 PMA3_RS04525 f4e193d75e20884739549b91a5daaed7 569 SUPERFAMILY SSF64182 44 457 3.01E-116 T 13-09-2016 PMA3_RS04525 f4e193d75e20884739549b91a5daaed7 569 Pfam PF02272 DHHA1 domain 375 442 1.5E-12 T 13-09-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 PMA3_RS04525 f4e193d75e20884739549b91a5daaed7 569 PANTHER PTHR30255 18 569 2.1E-213 T 13-09-2016 PMA3_RS04525 f4e193d75e20884739549b91a5daaed7 569 PANTHER PTHR30255:SF2 18 569 2.1E-213 T 13-09-2016 PMA3_RS04525 f4e193d75e20884739549b91a5daaed7 569 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 565 1.1E-150 T 13-09-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 PMA3_RS04525 f4e193d75e20884739549b91a5daaed7 569 Pfam PF01368 DHH family 69 204 3.4E-10 T 13-09-2016 IPR001667 DDH domain PMA3_RS27545 4c51092ce872606474469bc6184b771e 339 PANTHER PTHR33540:SF1 24 338 3.4E-139 T 13-09-2016 PMA3_RS27545 4c51092ce872606474469bc6184b771e 339 Pfam PF01636 Phosphotransferase enzyme family 36 258 9.2E-36 T 13-09-2016 IPR002575 Aminoglycoside phosphotransferase PMA3_RS27545 4c51092ce872606474469bc6184b771e 339 SUPERFAMILY SSF56112 27 316 3.57E-57 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS27545 4c51092ce872606474469bc6184b771e 339 Gene3D G3DSA:3.90.1200.10 105 332 1.6E-68 T 13-09-2016 PMA3_RS27545 4c51092ce872606474469bc6184b771e 339 PANTHER PTHR33540 24 338 3.4E-139 T 13-09-2016 PMA3_RS27545 4c51092ce872606474469bc6184b771e 339 Gene3D G3DSA:3.30.200.20 26 104 9.3E-30 T 13-09-2016 PMA3_RS14795 2b576e7ee5441b12ebd3c9d9c9b6bd36 292 Gene3D G3DSA:1.10.3720.10 68 285 5.8E-49 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14795 2b576e7ee5441b12ebd3c9d9c9b6bd36 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 284 1.1E-22 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14795 2b576e7ee5441b12ebd3c9d9c9b6bd36 292 PANTHER PTHR30450:SF2 54 291 2.7E-129 T 13-09-2016 PMA3_RS14795 2b576e7ee5441b12ebd3c9d9c9b6bd36 292 PANTHER PTHR30450 54 291 2.7E-129 T 13-09-2016 PMA3_RS14795 2b576e7ee5441b12ebd3c9d9c9b6bd36 292 SUPERFAMILY SSF161098 70 270 2.62E-45 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14795 2b576e7ee5441b12ebd3c9d9c9b6bd36 292 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 70 179 2.0E-19 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS28850 6f13be247c2ac2e7b0e605ff897d84bc 803 Gene3D G3DSA:3.60.20.10 408 642 4.5E-87 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS28850 6f13be247c2ac2e7b0e605ff897d84bc 803 Gene3D G3DSA:3.60.20.10 253 328 4.5E-87 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS28850 6f13be247c2ac2e7b0e605ff897d84bc 803 SUPERFAMILY SSF56235 39 798 2.57E-205 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS28850 6f13be247c2ac2e7b0e605ff897d84bc 803 Gene3D G3DSA:1.10.439.10 28 196 1.1E-52 T 13-09-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 PMA3_RS28850 6f13be247c2ac2e7b0e605ff897d84bc 803 PIRSF PIRSF001227 1 799 1.7E-166 T 13-09-2016 IPR014395 Penicillin acylase GO:0016811 PMA3_RS28850 6f13be247c2ac2e7b0e605ff897d84bc 803 PANTHER PTHR34218 1 800 0.0 T 13-09-2016 PMA3_RS28850 6f13be247c2ac2e7b0e605ff897d84bc 803 PANTHER PTHR34218:SF1 1 800 0.0 T 13-09-2016 PMA3_RS28850 6f13be247c2ac2e7b0e605ff897d84bc 803 Gene3D G3DSA:2.30.120.10 329 397 1.4E-23 T 13-09-2016 PMA3_RS28850 6f13be247c2ac2e7b0e605ff897d84bc 803 Pfam PF01804 Penicillin amidase 42 787 4.9E-196 T 13-09-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 PMA3_RS17450 ab72714dd7d30021acc06ee4a91ee702 190 PANTHER PTHR23029 55 184 2.4E-13 T 13-09-2016 PMA3_RS17450 ab72714dd7d30021acc06ee4a91ee702 190 Gene3D G3DSA:3.40.50.1240 4 175 9.6E-25 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS17450 ab72714dd7d30021acc06ee4a91ee702 190 SUPERFAMILY SSF53254 5 179 2.36E-31 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS17450 ab72714dd7d30021acc06ee4a91ee702 190 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 174 1.0E-22 T 13-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PMA3_RS17450 ab72714dd7d30021acc06ee4a91ee702 190 SMART SM00855 5 148 6.1E-7 T 13-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 SUPERFAMILY SSF46689 262 312 1.03E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 PANTHER PTHR11019 1 26 1.0E-162 T 13-09-2016 PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 SUPERFAMILY SSF52317 5 190 2.29E-43 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 Gene3D G3DSA:3.40.50.880 5 203 1.7E-39 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 PANTHER PTHR11019:SF90 1 26 1.0E-162 T 13-09-2016 PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 Gene3D G3DSA:1.10.10.60 264 311 3.3E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 Gene3D G3DSA:1.10.10.60 208 263 2.9E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 PANTHER PTHR11019:SF90 51 317 1.0E-162 T 13-09-2016 PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 Pfam PF12833 Helix-turn-helix domain 232 311 4.2E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 Pfam PF01965 DJ-1/PfpI family 6 171 3.9E-15 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 PANTHER PTHR11019 51 317 1.0E-162 T 13-09-2016 PMA3_RS28050 faac0cd7e0e5fd7ec04034a6941b0ae1 319 SMART SM00342 226 309 4.8E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 350 365 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 288 301 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 477 486 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 Pfam PF02954 Bacterial regulatory protein, Fis family 577 616 4.7E-12 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 Gene3D G3DSA:1.10.8.60 437 508 3.3E-22 T 13-09-2016 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 PANTHER PTHR32071 264 516 3.8E-140 T 13-09-2016 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 PANTHER PTHR32071 543 616 3.8E-140 T 13-09-2016 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 SUPERFAMILY SSF111126 74 214 5.18E-11 T 13-09-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 Gene3D G3DSA:3.40.50.300 262 436 9.1E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 Pfam PF06505 Activator of aromatic catabolism 47 146 1.6E-34 T 13-09-2016 IPR010523 Activator of aromatic catabolism PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 SUPERFAMILY SSF52540 264 505 2.95E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 601 618 1.9E-8 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 584 601 1.9E-8 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 SMART SM00382 284 428 9.9E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 Pfam PF00158 Sigma-54 interaction domain 265 431 1.6E-66 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 Gene3D G3DSA:1.10.10.60 575 616 1.2E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 Pfam PF02830 V4R domain 158 219 1.2E-17 T 13-09-2016 IPR004096 4-vinyl reductase, 4VR PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 SMART SM00989 157 219 1.6E-27 T 13-09-2016 IPR004096 4-vinyl reductase, 4VR PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 SUPERFAMILY SSF46689 568 616 7.62E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 SUPERFAMILY SSF46689 478 520 7.62E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 Gene3D G3DSA:3.30.1380.20 51 223 1.1E-17 T 13-09-2016 PMA3_RS18560 200dacbf85e374811659b6fec42009fc 618 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 65 172 2.0E-51 T 13-09-2016 IPR010523 Activator of aromatic catabolism PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 PANTHER PTHR32071:SF5 292 632 8.8E-122 T 13-09-2016 PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 SUPERFAMILY SSF52540 341 574 4.44E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 Pfam PF02954 Bacterial regulatory protein, Fis family 592 632 1.2E-12 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 Gene3D G3DSA:3.40.50.300 332 507 2.5E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 358 371 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 SMART SM00382 354 498 5.5E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 421 436 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 Gene3D G3DSA:1.10.10.60 588 631 2.0E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 Gene3D G3DSA:1.10.8.60 515 581 3.9E-10 T 13-09-2016 PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 615 634 1.4E-8 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 598 615 1.4E-8 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 Pfam PF00158 Sigma-54 interaction domain 336 501 8.6E-62 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 SUPERFAMILY SSF46689 543 632 1.43E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS07455 39b741d7aafb43130155f6b19c1f4839 634 PANTHER PTHR32071 292 632 8.8E-122 T 13-09-2016 PMA3_RS20295 99ca50053d2fef97ed25609efc7bce3d 249 SUPERFAMILY SSF53850 22 244 1.18E-23 T 13-09-2016 PMA3_RS20295 99ca50053d2fef97ed25609efc7bce3d 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 243 7.7E-11 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS20295 99ca50053d2fef97ed25609efc7bce3d 249 Gene3D G3DSA:3.40.190.10 204 244 1.9E-6 T 13-09-2016 PMA3_RS20295 99ca50053d2fef97ed25609efc7bce3d 249 Gene3D G3DSA:3.40.190.10 37 109 1.9E-6 T 13-09-2016 PMA3_RS15405 33a96ce6a6081a1b6f085b0399d72c4e 613 PIRSF PIRSF002741 2 594 2.5E-103 T 13-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PMA3_RS15405 33a96ce6a6081a1b6f085b0399d72c4e 613 Gene3D G3DSA:3.10.105.10 307 561 3.4E-50 T 13-09-2016 PMA3_RS15405 33a96ce6a6081a1b6f085b0399d72c4e 613 SUPERFAMILY SSF53850 50 593 2.04E-123 T 13-09-2016 PMA3_RS15405 33a96ce6a6081a1b6f085b0399d72c4e 613 Gene3D G3DSA:3.90.76.10 65 216 3.5E-31 T 13-09-2016 PMA3_RS15405 33a96ce6a6081a1b6f085b0399d72c4e 613 PANTHER PTHR30290:SF2 382 602 1.6E-218 T 13-09-2016 PMA3_RS15405 33a96ce6a6081a1b6f085b0399d72c4e 613 PANTHER PTHR30290 14 357 1.6E-218 T 13-09-2016 PMA3_RS15405 33a96ce6a6081a1b6f085b0399d72c4e 613 PANTHER PTHR30290:SF2 14 357 1.6E-218 T 13-09-2016 PMA3_RS15405 33a96ce6a6081a1b6f085b0399d72c4e 613 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 108 503 5.3E-73 T 13-09-2016 IPR000914 Solute-binding protein family 5 domain PMA3_RS15405 33a96ce6a6081a1b6f085b0399d72c4e 613 PANTHER PTHR30290 382 602 1.6E-218 T 13-09-2016 PMA3_RS11975 b573f5a825f5509eb3444f056981c2c6 172 PIRSF PIRSF028470 1 166 1.5E-63 T 13-09-2016 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related PMA3_RS11975 b573f5a825f5509eb3444f056981c2c6 172 Gene3D G3DSA:3.10.450.50 36 167 2.3E-28 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS11975 b573f5a825f5509eb3444f056981c2c6 172 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 41 163 3.1E-22 T 13-09-2016 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 PMA3_RS11975 b573f5a825f5509eb3444f056981c2c6 172 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 41 163 4.6E-32 T 13-09-2016 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: REACT_13685 PMA3_RS11975 b573f5a825f5509eb3444f056981c2c6 172 SUPERFAMILY SSF54427 39 162 9.37E-30 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 876 5.5E-280 T 13-09-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 PANTHER PTHR30523 1 876 0.0 T 13-09-2016 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 SUPERFAMILY SSF51621 9 876 0.0 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 876 18.669 T 13-09-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 PANTHER PTHR30523:SF3 1 876 0.0 T 13-09-2016 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 13-09-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.7E-68 T 13-09-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 383 403 1.7E-68 T 13-09-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 705 731 1.7E-68 T 13-09-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 574 603 1.7E-68 T 13-09-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.7E-68 T 13-09-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 532 552 1.7E-68 T 13-09-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.7E-68 T 13-09-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 Gene3D G3DSA:1.20.1440.90 273 386 3.7E-33 T 13-09-2016 PMA3_RS04660 382816e7e677d7d97df494ac40c44964 876 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 534 546 - T 13-09-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PMA3_RS16785 6e67b5480638763c7a52ffb44bf2a9ee 340 SUPERFAMILY SSF51735 144 293 2.04E-19 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS16785 6e67b5480638763c7a52ffb44bf2a9ee 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 13-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PMA3_RS16785 6e67b5480638763c7a52ffb44bf2a9ee 340 PANTHER PTHR11695 12 336 1.3E-57 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS16785 6e67b5480638763c7a52ffb44bf2a9ee 340 Pfam PF00107 Zinc-binding dehydrogenase 180 291 6.1E-9 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS16785 6e67b5480638763c7a52ffb44bf2a9ee 340 SUPERFAMILY SSF50129 1 175 1.15E-36 T 13-09-2016 IPR011032 GroES-like PMA3_RS16785 6e67b5480638763c7a52ffb44bf2a9ee 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 3.1E-25 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS16785 6e67b5480638763c7a52ffb44bf2a9ee 340 Gene3D G3DSA:3.90.180.10 1 169 3.0E-41 T 13-09-2016 IPR011032 GroES-like PMA3_RS16785 6e67b5480638763c7a52ffb44bf2a9ee 340 PANTHER PTHR11695:SF429 12 336 1.3E-57 T 13-09-2016 PMA3_RS16785 6e67b5480638763c7a52ffb44bf2a9ee 340 Gene3D G3DSA:3.40.50.720 170 278 8.1E-19 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS00445 026b6a057c8846117866bdc3efc9fdbf 295 PANTHER PTHR30367 6 287 4.5E-93 T 13-09-2016 PMA3_RS00445 026b6a057c8846117866bdc3efc9fdbf 295 SUPERFAMILY SSF111369 46 188 1.26E-20 T 13-09-2016 PMA3_RS00445 026b6a057c8846117866bdc3efc9fdbf 295 Gene3D G3DSA:2.40.50.100 47 80 1.5E-17 T 13-09-2016 PMA3_RS00445 026b6a057c8846117866bdc3efc9fdbf 295 Gene3D G3DSA:2.40.50.100 153 186 1.5E-17 T 13-09-2016 PMA3_RS00445 026b6a057c8846117866bdc3efc9fdbf 295 PANTHER PTHR30367:SF5 6 287 4.5E-93 T 13-09-2016 PMA3_RS00445 026b6a057c8846117866bdc3efc9fdbf 295 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 228 1.4E-33 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS00445 026b6a057c8846117866bdc3efc9fdbf 295 Pfam PF13437 HlyD family secretion protein 155 237 8.4E-13 T 13-09-2016 PMA3_RS00445 026b6a057c8846117866bdc3efc9fdbf 295 Pfam PF13533 Biotin-lipoyl like 48 95 2.7E-17 T 13-09-2016 PMA3_RS03200 8e41ab0b7b6dfbd9dcbbec5c12389eda 92 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 1.4E-28 T 13-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03200 8e41ab0b7b6dfbd9dcbbec5c12389eda 92 Gene3D G3DSA:1.20.58.110 3 86 6.9E-32 T 13-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03200 8e41ab0b7b6dfbd9dcbbec5c12389eda 92 Pfam PF01649 Ribosomal protein S20 2 83 2.1E-29 T 13-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03200 8e41ab0b7b6dfbd9dcbbec5c12389eda 92 PANTHER PTHR33398 2 89 4.2E-38 T 13-09-2016 PMA3_RS03200 8e41ab0b7b6dfbd9dcbbec5c12389eda 92 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 19 92 7.0E-34 T 13-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03200 8e41ab0b7b6dfbd9dcbbec5c12389eda 92 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.536 T 13-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03200 8e41ab0b7b6dfbd9dcbbec5c12389eda 92 SUPERFAMILY SSF46992 3 86 8.24E-33 T 13-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 Pfam PF01726 LexA DNA binding domain 1 65 6.8E-31 T 13-09-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 Gene3D G3DSA:2.10.109.10 80 202 5.6E-46 T 13-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 PANTHER PTHR33516:SF2 1 202 5.2E-99 T 13-09-2016 PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 Pfam PF00717 Peptidase S24-like 118 185 1.1E-15 T 13-09-2016 IPR019759 Peptidase S24/S26A/S26B PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 SUPERFAMILY SSF51306 79 201 5.41E-38 T 13-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 PANTHER PTHR33516 1 202 5.2E-99 T 13-09-2016 PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 Hamap MF_00015 LexA repressor [lexA]. 3 202 31.641 T 13-09-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 SUPERFAMILY SSF46785 3 70 6.99E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 202 3.1E-77 T 13-09-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 Gene3D G3DSA:1.10.10.10 1 69 3.3E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 3.0E-12 T 13-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 3.0E-12 T 13-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PMA3_RS08640 f50d6fadbe548ba2bc50c50c1f7f98a5 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 3.0E-12 T 13-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PIRSF PIRSF002869 1 511 7.0E-176 T 13-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PANTHER PTHR11206:SF90 217 442 2.0E-97 T 13-09-2016 PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PANTHER PTHR11206:SF90 469 486 2.0E-97 T 13-09-2016 PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PANTHER PTHR11206:SF90 70 82 2.0E-97 T 13-09-2016 PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PANTHER PTHR11206 217 442 2.0E-97 T 13-09-2016 PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PANTHER PTHR11206 469 486 2.0E-97 T 13-09-2016 PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PANTHER PTHR11206 70 82 2.0E-97 T 13-09-2016 PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PRINTS PR01806 Virulence factor MviN signature 357 376 1.2E-84 T 13-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PRINTS PR01806 Virulence factor MviN signature 133 157 1.2E-84 T 13-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PRINTS PR01806 Virulence factor MviN signature 52 68 1.2E-84 T 13-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PRINTS PR01806 Virulence factor MviN signature 409 426 1.2E-84 T 13-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PRINTS PR01806 Virulence factor MviN signature 259 285 1.2E-84 T 13-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PRINTS PR01806 Virulence factor MviN signature 33 52 1.2E-84 T 13-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 PRINTS PR01806 Virulence factor MviN signature 157 178 1.2E-84 T 13-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 Pfam PF03023 MviN-like protein 28 477 3.4E-155 T 13-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PMA3_RS03205 232640e74cbb912ad7a2852a687ba604 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 4.3E-164 T 13-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 Pfam PF11941 Domain of unknown function (DUF3459) 451 543 3.1E-5 T 13-09-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 SMART SM00642 11 406 2.8E-145 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 SUPERFAMILY SSF51011 467 546 3.2E-15 T 13-09-2016 PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 PANTHER PTHR10357 443 546 4.5E-273 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 Gene3D G3DSA:2.60.40.1180 469 546 2.2E-20 T 13-09-2016 IPR013780 Glycosyl hydrolase, all-beta PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 Gene3D G3DSA:3.20.20.80 168 463 7.0E-116 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 Gene3D G3DSA:3.20.20.80 2 102 7.0E-116 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 PANTHER PTHR10357:SF170 443 546 4.5E-273 T 13-09-2016 PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 PANTHER PTHR10357:SF170 1 411 4.5E-273 T 13-09-2016 PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 SUPERFAMILY SSF51445 3 462 1.07E-143 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 4 545 1.2E-258 T 13-09-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 Gene3D G3DSA:3.90.400.10 103 167 1.9E-27 T 13-09-2016 PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 PANTHER PTHR10357 1 411 4.5E-273 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS24120 0347b5567484ad276925ab4d11aa325e 548 Pfam PF00128 Alpha amylase, catalytic domain 26 363 9.8E-114 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 PANTHER PTHR30126 8 295 1.7E-78 T 13-09-2016 PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 Gene3D G3DSA:1.10.10.10 7 87 4.1E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 Gene3D G3DSA:3.40.190.10 98 184 8.4E-15 T 13-09-2016 PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.3E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 SUPERFAMILY SSF46785 8 108 4.99E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 Pfam PF03466 LysR substrate binding domain 95 296 2.1E-20 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 SUPERFAMILY SSF53850 97 297 3.44E-23 T 13-09-2016 PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 PANTHER PTHR30126:SF16 8 295 1.7E-78 T 13-09-2016 PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.2E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.2E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13155 f020b3fdec1d1b2739e764e4777b84a5 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.2E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Gene3D G3DSA:2.40.50.140 194 281 1.2E-30 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Gene3D G3DSA:2.40.50.140 21 101 3.4E-7 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Gene3D G3DSA:2.40.50.140 282 365 8.3E-29 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SUPERFAMILY SSF50249 431 536 5.82E-23 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PRINTS PR00681 Ribosomal protein S1 signature 21 39 9.7E-80 T 13-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PRINTS PR00681 Ribosomal protein S1 signature 86 105 9.7E-80 T 13-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PRINTS PR00681 Ribosomal protein S1 signature 110 126 9.7E-80 T 13-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PRINTS PR00681 Ribosomal protein S1 signature 292 311 9.7E-80 T 13-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PRINTS PR00681 Ribosomal protein S1 signature 128 145 9.7E-80 T 13-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PRINTS PR00681 Ribosomal protein S1 signature 157 177 9.7E-80 T 13-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PRINTS PR00681 Ribosomal protein S1 signature 332 350 9.7E-80 T 13-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PRINTS PR00681 Ribosomal protein S1 signature 214 235 9.7E-80 T 13-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SMART SM00316 105 173 2.0E-8 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SMART SM00316 451 522 3.9E-20 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SMART SM00316 19 89 0.058 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SMART SM00316 277 349 5.2E-25 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SMART SM00316 192 262 1.0E-28 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SMART SM00316 364 436 5.8E-20 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Pfam PF00575 S1 RNA binding domain 363 436 2.2E-18 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Pfam PF00575 S1 RNA binding domain 280 349 3.5E-20 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Pfam PF00575 S1 RNA binding domain 191 262 2.2E-21 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Pfam PF00575 S1 RNA binding domain 452 522 1.1E-14 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Pfam PF00575 S1 RNA binding domain 105 173 2.7E-11 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Gene3D G3DSA:2.40.50.140 366 445 6.2E-25 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PIRSF PIRSF002111 1 536 2.0E-210 T 13-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SUPERFAMILY SSF50249 107 187 1.34E-14 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SUPERFAMILY SSF50249 191 276 5.15E-27 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SUPERFAMILY SSF50249 1 114 3.43E-16 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Gene3D G3DSA:2.40.50.140 446 522 9.9E-22 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 Gene3D G3DSA:2.40.50.140 102 174 2.3E-14 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PANTHER PTHR10724 1 516 8.9E-263 T 13-09-2016 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 522 2.8E-213 T 13-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SUPERFAMILY SSF50249 346 445 7.01E-22 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 PANTHER PTHR10724:SF6 1 516 8.9E-263 T 13-09-2016 PMA3_RS20945 f89be78e3e376c2c697181e7863bf427 563 SUPERFAMILY SSF50249 257 358 2.07E-25 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 3.6E-60 T 13-09-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 Gene3D G3DSA:3.90.226.10 2 204 6.1E-56 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 Gene3D G3DSA:1.10.1040.10 501 600 9.2E-14 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 SUPERFAMILY SSF48179 498 640 2.21E-18 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 Gene3D G3DSA:3.40.50.720 315 500 1.5E-54 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 SUPERFAMILY SSF51735 316 497 9.44E-55 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 203 2.4E-31 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 SUPERFAMILY SSF52096 3 297 9.61E-61 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 Gene3D G3DSA:1.10.1040.10 636 713 1.2E-10 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 PANTHER PTHR23309 5 714 0.0 T 13-09-2016 PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 SUPERFAMILY SSF48179 622 714 6.89E-19 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 499 599 1.4E-15 T 13-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS20705 0c5000ab6045435d951bb79ed9f0435d 714 PANTHER PTHR23309:SF19 5 714 0.0 T 13-09-2016 PMA3_RS15705 fa2b571328aae1f4b11df94c9acee025 420 SMART SM00304 156 208 7.5E-6 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS15705 fa2b571328aae1f4b11df94c9acee025 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 412 7.7E-7 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15705 fa2b571328aae1f4b11df94c9acee025 420 Pfam PF07730 Histidine kinase 224 289 1.5E-11 T 13-09-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PMA3_RS15705 fa2b571328aae1f4b11df94c9acee025 420 Pfam PF00672 HAMP domain 138 205 1.4E-8 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS15705 fa2b571328aae1f4b11df94c9acee025 420 PANTHER PTHR24421 3 56 1.2E-36 T 13-09-2016 PMA3_RS15705 fa2b571328aae1f4b11df94c9acee025 420 PANTHER PTHR24421 219 417 1.2E-36 T 13-09-2016 PMA3_RS15705 fa2b571328aae1f4b11df94c9acee025 420 SMART SM00387 328 419 1.5E-4 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15705 fa2b571328aae1f4b11df94c9acee025 420 Gene3D G3DSA:3.30.565.10 312 418 4.9E-10 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15705 fa2b571328aae1f4b11df94c9acee025 420 SUPERFAMILY SSF55874 284 417 3.01E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS20145 670cba185575d7e60ab3e34e323b711b 426 PANTHER PTHR11601:SF17 44 425 3.7E-67 T 13-09-2016 PMA3_RS20145 670cba185575d7e60ab3e34e323b711b 426 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 25 3.0E-4 T 13-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PMA3_RS20145 670cba185575d7e60ab3e34e323b711b 426 SUPERFAMILY SSF53383 40 424 2.86E-62 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS20145 670cba185575d7e60ab3e34e323b711b 426 Gene3D G3DSA:3.90.1150.10 315 424 5.0E-11 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS20145 670cba185575d7e60ab3e34e323b711b 426 Gene3D G3DSA:3.40.640.10 66 299 5.0E-43 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS20145 670cba185575d7e60ab3e34e323b711b 426 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 256 276 - T 13-09-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PMA3_RS20145 670cba185575d7e60ab3e34e323b711b 426 Pfam PF00266 Aminotransferase class-V 100 418 2.4E-32 T 13-09-2016 IPR000192 Aminotransferase class V domain PMA3_RS20145 670cba185575d7e60ab3e34e323b711b 426 PANTHER PTHR11601 44 425 3.7E-67 T 13-09-2016 PMA3_RS29745 57fa0e794d83040cd80412f5391e79d9 163 PANTHER PTHR23046:SF2 1 161 3.8E-85 T 13-09-2016 PMA3_RS29745 57fa0e794d83040cd80412f5391e79d9 163 PIRSF PIRSF001338 1 162 1.8E-64 T 13-09-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 PMA3_RS29745 57fa0e794d83040cd80412f5391e79d9 163 SMART SM01001 3 154 3.9E-99 T 13-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PMA3_RS29745 57fa0e794d83040cd80412f5391e79d9 163 PANTHER PTHR23046 1 161 3.8E-85 T 13-09-2016 PMA3_RS29745 57fa0e794d83040cd80412f5391e79d9 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 158 1.7E-66 T 13-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PMA3_RS29745 57fa0e794d83040cd80412f5391e79d9 163 Gene3D G3DSA:3.40.50.7700 3 158 3.7E-74 T 13-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PMA3_RS29745 57fa0e794d83040cd80412f5391e79d9 163 SUPERFAMILY SSF52255 4 159 3.27E-66 T 13-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PMA3_RS29745 57fa0e794d83040cd80412f5391e79d9 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 31.716 T 13-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PMA3_RS29745 57fa0e794d83040cd80412f5391e79d9 163 Pfam PF00731 AIR carboxylase 5 152 5.6E-63 T 13-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 PANTHER PTHR11815 1 388 2.7E-228 T 13-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 Gene3D G3DSA:3.30.1490.20 22 95 1.7E-34 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 Gene3D G3DSA:3.40.50.261 240 383 4.6E-66 T 13-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 SUPERFAMILY SSF52210 239 384 5.23E-53 T 13-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 13-09-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 Pfam PF08442 ATP-grasp domain 2 203 1.5E-81 T 13-09-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 PIRSF PIRSF001554 1 388 1.5E-153 T 13-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.3E-172 T 13-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 Gene3D G3DSA:3.30.470.20 96 239 1.9E-56 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 Pfam PF00549 CoA-ligase 262 382 6.1E-24 T 13-09-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 SUPERFAMILY SSF56059 1 237 1.12E-79 T 13-09-2016 PMA3_RS21245 9f9f7d82e173a340244d21d7ca283c8e 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.311 T 13-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 69 742 7.3E-185 T 13-09-2016 IPR004811 RelA/SpoT family GO:0015969 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 SUPERFAMILY SSF81271 408 476 7.85E-22 T 13-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 PANTHER PTHR21262:SF5 69 746 0.0 T 13-09-2016 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 SUPERFAMILY SSF55021 667 742 7.08E-14 T 13-09-2016 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 Pfam PF13291 ACT domain 667 743 5.5E-17 T 13-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 Gene3D G3DSA:3.10.20.30 416 478 7.0E-26 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 Pfam PF13328 HD domain 40 202 2.5E-44 T 13-09-2016 IPR003607 HD/PDEase domain PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 Gene3D G3DSA:3.30.460.10 205 351 4.5E-54 T 13-09-2016 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 Pfam PF04607 Region found in RelA / SpoT proteins 262 370 2.8E-38 T 13-09-2016 IPR007685 RelA/SpoT GO:0015969 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 SMART SM00954 262 372 9.8E-67 T 13-09-2016 IPR007685 RelA/SpoT GO:0015969 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 Gene3D G3DSA:3.30.70.260 668 741 1.6E-16 T 13-09-2016 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 SUPERFAMILY SSF109604 18 218 8.47E-47 T 13-09-2016 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 SUPERFAMILY SSF81301 207 420 2.94E-63 T 13-09-2016 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 Pfam PF02824 TGS domain 416 475 2.7E-22 T 13-09-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PMA3_RS05955 6bc3aafdab8591e8f7883144fd306ed0 747 PANTHER PTHR21262 69 746 0.0 T 13-09-2016 PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 SUPERFAMILY SSF50182 912 977 2.48E-17 T 13-09-2016 IPR010920 LSM domain PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 PANTHER PTHR30347:SF2 1 1100 0.0 T 13-09-2016 PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 SUPERFAMILY SSF82861 827 910 3.14E-7 T 13-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 Gene3D G3DSA:3.30.70.100 982 1066 2.8E-23 T 13-09-2016 PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 941 975 - T 13-09-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 Pfam PF12795 Mechanosensitive ion channel porin domain 36 264 2.0E-54 T 13-09-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 490 808 2.9E-104 T 13-09-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 SUPERFAMILY SSF82689 980 1079 4.32E-25 T 13-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 Pfam PF00924 Mechanosensitive ion channel 869 1068 7.4E-56 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 Gene3D G3DSA:2.30.30.60 927 976 6.7E-17 T 13-09-2016 PMA3_RS01700 3e0c9ba9f4ca941b0fef49877d5f35de 1115 PANTHER PTHR30347 1 1100 0.0 T 13-09-2016 PMA3_RS16510 dc8d86b961521ae478368179249f4665 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS16510 dc8d86b961521ae478368179249f4665 496 Gene3D G3DSA:3.40.605.10 20 279 6.6E-92 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16510 dc8d86b961521ae478368179249f4665 496 Gene3D G3DSA:3.40.309.10 280 467 1.6E-66 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS16510 dc8d86b961521ae478368179249f4665 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS16510 dc8d86b961521ae478368179249f4665 496 PANTHER PTHR11699:SF210 1 496 0.0 T 13-09-2016 PMA3_RS16510 dc8d86b961521ae478368179249f4665 496 Pfam PF00171 Aldehyde dehydrogenase family 34 491 1.9E-165 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16510 dc8d86b961521ae478368179249f4665 496 SUPERFAMILY SSF53720 8 495 1.83E-164 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS16510 dc8d86b961521ae478368179249f4665 496 PANTHER PTHR11699 1 496 0.0 T 13-09-2016 PMA3_RS22360 f82f5de47a623444af78c689bc27b912 310 SUPERFAMILY SSF51735 95 275 1.54E-41 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS22360 f82f5de47a623444af78c689bc27b912 310 Gene3D G3DSA:3.40.50.720 96 275 6.9E-45 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS22360 f82f5de47a623444af78c689bc27b912 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 274 7.2E-41 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS22360 f82f5de47a623444af78c689bc27b912 310 PANTHER PTHR10996 35 308 3.3E-95 T 13-09-2016 PMA3_RS22360 f82f5de47a623444af78c689bc27b912 310 PANTHER PTHR10996:SF148 35 308 3.3E-95 T 13-09-2016 PMA3_RS13890 08d91d9a78d90b53debe618e09b7f1da 567 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 80 246 9.4E-60 T 13-09-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PMA3_RS13890 08d91d9a78d90b53debe618e09b7f1da 567 PANTHER PTHR36837 80 567 9.9E-171 T 13-09-2016 PMA3_RS13890 08d91d9a78d90b53debe618e09b7f1da 567 SUPERFAMILY SSF53474 206 502 3.38E-36 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13890 08d91d9a78d90b53debe618e09b7f1da 567 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 50 567 5.1E-230 T 13-09-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 PMA3_RS13890 08d91d9a78d90b53debe618e09b7f1da 567 Gene3D G3DSA:3.40.50.1820 195 536 8.4E-32 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13890 08d91d9a78d90b53debe618e09b7f1da 567 PANTHER PTHR36837:SF2 80 567 9.9E-171 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 Gene3D G3DSA:3.50.50.60 5 142 1.9E-31 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 SUPERFAMILY SSF55424 343 461 1.89E-29 T 13-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 4.4E-51 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 4.4E-51 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 4.4E-51 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.4E-51 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 4.4E-51 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 4.4E-51 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 4.4E-51 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 4.4E-51 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.4E-51 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 325 1.9E-64 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 455 8.8E-30 T 13-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 SUPERFAMILY SSF51905 4 318 7.2E-55 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 Gene3D G3DSA:3.50.50.60 143 333 3.9E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.7E-30 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 1.7E-30 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.7E-30 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.7E-30 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.7E-30 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 464 72.101 T 13-09-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PIRSF PIRSF000350 2 459 1.5E-66 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PANTHER PTHR22912:SF93 4 459 4.8E-254 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 PANTHER PTHR22912 4 459 4.8E-254 T 13-09-2016 PMA3_RS08685 d7140ce8d25d15f2059283404f29e646 464 Gene3D G3DSA:3.30.390.30 343 457 7.5E-31 T 13-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PMA3_RS19265 c47a834dbaf0a6e6c8f8c8070b1c13e7 224 Gene3D G3DSA:3.40.50.720 24 194 8.1E-41 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS19265 c47a834dbaf0a6e6c8f8c8070b1c13e7 224 SUPERFAMILY SSF51735 25 193 1.88E-26 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS19265 c47a834dbaf0a6e6c8f8c8070b1c13e7 224 PANTHER PTHR14239 21 193 1.1E-28 T 13-09-2016 PMA3_RS19265 c47a834dbaf0a6e6c8f8c8070b1c13e7 224 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 25 116 8.5E-18 T 13-09-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PMA3_RS14640 c1e3ad0531980ae7cff44889ff4f44d4 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 5.1E-121 T 13-09-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 PMA3_RS14640 c1e3ad0531980ae7cff44889ff4f44d4 260 PANTHER PTHR12110:SF3 1 255 1.8E-98 T 13-09-2016 PMA3_RS14640 c1e3ad0531980ae7cff44889ff4f44d4 260 PIRSF PIRSF006241 1 259 5.2E-93 T 13-09-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 PMA3_RS14640 c1e3ad0531980ae7cff44889ff4f44d4 260 Gene3D G3DSA:3.20.20.150 1 255 2.2E-89 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS14640 c1e3ad0531980ae7cff44889ff4f44d4 260 PANTHER PTHR12110 1 255 1.8E-98 T 13-09-2016 PMA3_RS14640 c1e3ad0531980ae7cff44889ff4f44d4 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.1E-31 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS14640 c1e3ad0531980ae7cff44889ff4f44d4 260 SUPERFAMILY SSF51658 1 256 2.49E-85 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 SUPERFAMILY SSF55031 177 291 2.24E-21 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 13-09-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 Gene3D G3DSA:3.30.70.360 186 288 3.0E-23 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 PANTHER PTHR11014:SF75 6 382 6.4E-186 T 13-09-2016 PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 SUPERFAMILY SSF53187 4 176 2.54E-53 T 13-09-2016 PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 SUPERFAMILY SSF53187 301 378 2.54E-53 T 13-09-2016 PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 PANTHER PTHR11014 6 382 6.4E-186 T 13-09-2016 PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 Pfam PF07687 Peptidase dimerisation domain 174 284 1.1E-23 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 Gene3D G3DSA:3.40.630.10 319 378 3.2E-57 T 13-09-2016 PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 Gene3D G3DSA:3.40.630.10 6 185 3.2E-57 T 13-09-2016 PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 379 51.697 T 13-09-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 Pfam PF01546 Peptidase family M20/M25/M40 73 375 4.9E-30 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS28970 8e23c58ddcf68c7baa42d29cea81be48 386 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 374 2.4E-118 T 13-09-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 Gene3D G3DSA:1.10.540.10 5 134 2.9E-44 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 Gene3D G3DSA:1.20.140.10 227 389 5.4E-45 T 13-09-2016 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 2.9E-36 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 Gene3D G3DSA:2.40.110.10 135 226 2.6E-31 T 13-09-2016 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 227 1.9E-20 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 SUPERFAMILY SSF56645 7 238 3.93E-78 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 PANTHER PTHR10909 4 392 5.4E-271 T 13-09-2016 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 SUPERFAMILY SSF47203 242 391 7.41E-43 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 PANTHER PTHR10909:SF307 4 392 5.4E-271 T 13-09-2016 PMA3_RS00275 cfc2f9e956d3ce5e7772e9938a3ef1f0 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 385 4.6E-28 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS29355 5f8eac99b0f65ed87c814470bf8fae22 325 SUPERFAMILY SSF52540 83 320 7.24E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29355 5f8eac99b0f65ed87c814470bf8fae22 325 Gene3D G3DSA:3.40.50.300 83 259 1.2E-42 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29355 5f8eac99b0f65ed87c814470bf8fae22 325 PANTHER PTHR23077 109 318 1.8E-38 T 13-09-2016 PMA3_RS29355 5f8eac99b0f65ed87c814470bf8fae22 325 SMART SM00382 121 253 8.8E-13 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS29355 5f8eac99b0f65ed87c814470bf8fae22 325 Gene3D G3DSA:1.10.8.60 260 321 5.6E-8 T 13-09-2016 PMA3_RS29355 5f8eac99b0f65ed87c814470bf8fae22 325 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 125 250 3.2E-29 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS03020 4b7dc42c9dff60ef15a3078a33ce2188 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 5.2E-46 T 13-09-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PMA3_RS03020 4b7dc42c9dff60ef15a3078a33ce2188 335 PIRSF PIRSF000267 2 335 2.9E-96 T 13-09-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PMA3_RS03020 4b7dc42c9dff60ef15a3078a33ce2188 335 PANTHER PTHR30365:SF4 1 335 2.9E-189 T 13-09-2016 PMA3_RS03020 4b7dc42c9dff60ef15a3078a33ce2188 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 5.5E-104 T 13-09-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PMA3_RS03020 4b7dc42c9dff60ef15a3078a33ce2188 335 PANTHER PTHR30365 1 335 2.9E-189 T 13-09-2016 PMA3_RS20405 0526550bd25bc2e7cc8174ee7e2e6c29 403 TIGRFAM TIGR00886 2A0108: nitrite transporter 13 347 2.3E-94 T 13-09-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 PMA3_RS20405 0526550bd25bc2e7cc8174ee7e2e6c29 403 PANTHER PTHR23515:SF4 1 395 3.5E-218 T 13-09-2016 PMA3_RS20405 0526550bd25bc2e7cc8174ee7e2e6c29 403 PANTHER PTHR23515 1 395 3.5E-218 T 13-09-2016 PMA3_RS20405 0526550bd25bc2e7cc8174ee7e2e6c29 403 Gene3D G3DSA:1.20.1250.20 200 378 3.0E-20 T 13-09-2016 PMA3_RS20405 0526550bd25bc2e7cc8174ee7e2e6c29 403 Gene3D G3DSA:1.20.1250.20 12 196 1.9E-25 T 13-09-2016 PMA3_RS20405 0526550bd25bc2e7cc8174ee7e2e6c29 403 Pfam PF07690 Major Facilitator Superfamily 23 349 6.7E-44 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS20405 0526550bd25bc2e7cc8174ee7e2e6c29 403 SUPERFAMILY SSF103473 5 390 2.62E-60 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PANTHER PTHR22912 200 323 1.1E-42 T 13-09-2016 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 Gene3D G3DSA:3.50.50.60 3 116 9.0E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 Gene3D G3DSA:3.50.50.60 269 335 9.0E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PANTHER PTHR22912:SF141 3 179 1.1E-42 T 13-09-2016 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.4E-12 T 13-09-2016 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 3.4E-12 T 13-09-2016 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 3.4E-12 T 13-09-2016 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 Gene3D G3DSA:3.50.50.60 117 268 2.3E-4 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 319 1.9E-21 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 2.0E-10 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 295 313 2.0E-10 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 2.0E-10 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 SUPERFAMILY SSF51905 1 331 2.69E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 Pfam PF04324 BFD-like [2Fe-2S] binding domain 377 428 4.2E-6 T 13-09-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PANTHER PTHR22912:SF141 200 323 1.1E-42 T 13-09-2016 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PIRSF PIRSF037495 1 458 1.7E-155 T 13-09-2016 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 PMA3_RS17905 b6337e9a9b3e1ed284292c501913aabf 458 PANTHER PTHR22912 3 179 1.1E-42 T 13-09-2016 PMA3_RS25320 5a223022cb7234f8723aad13776008b9 307 SUPERFAMILY SSF161098 98 285 1.57E-27 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25320 5a223022cb7234f8723aad13776008b9 307 PANTHER PTHR30465 15 305 2.1E-126 T 13-09-2016 PMA3_RS25320 5a223022cb7234f8723aad13776008b9 307 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 74 4.6E-15 T 13-09-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PMA3_RS25320 5a223022cb7234f8723aad13776008b9 307 PANTHER PTHR30465:SF10 15 305 2.1E-126 T 13-09-2016 PMA3_RS25320 5a223022cb7234f8723aad13776008b9 307 Gene3D G3DSA:1.10.3720.10 97 301 7.2E-26 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25320 5a223022cb7234f8723aad13776008b9 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 304 1.2E-28 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS18765 d1311644a1aef6206c121baf57c8007b 228 Gene3D G3DSA:3.40.109.10 123 221 7.5E-45 T 13-09-2016 IPR000415 Nitroreductase-like GO:0016491 PMA3_RS18765 d1311644a1aef6206c121baf57c8007b 228 Gene3D G3DSA:3.40.109.10 1 91 7.5E-45 T 13-09-2016 IPR000415 Nitroreductase-like GO:0016491 PMA3_RS18765 d1311644a1aef6206c121baf57c8007b 228 SUPERFAMILY SSF55469 1 220 9.68E-45 T 13-09-2016 IPR000415 Nitroreductase-like GO:0016491 PMA3_RS18765 d1311644a1aef6206c121baf57c8007b 228 Pfam PF00881 Nitroreductase family 7 197 6.1E-32 T 13-09-2016 IPR029479 Nitroreductase PMA3_RS18765 d1311644a1aef6206c121baf57c8007b 228 PANTHER PTHR23026 1 227 7.7E-43 T 13-09-2016 PMA3_RS18765 d1311644a1aef6206c121baf57c8007b 228 PANTHER PTHR23026:SF90 1 227 7.7E-43 T 13-09-2016 PMA3_RS11045 1e70a2231969134cc40244bcdb3a7fa3 429 Pfam PF01266 FAD dependent oxidoreductase 34 385 8.8E-53 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS11045 1e70a2231969134cc40244bcdb3a7fa3 429 Gene3D G3DSA:3.50.50.60 350 394 4.0E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11045 1e70a2231969134cc40244bcdb3a7fa3 429 Gene3D G3DSA:3.50.50.60 25 123 4.0E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11045 1e70a2231969134cc40244bcdb3a7fa3 429 Gene3D G3DSA:3.50.50.60 177 257 4.0E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11045 1e70a2231969134cc40244bcdb3a7fa3 429 SUPERFAMILY SSF51905 31 334 3.8E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11045 1e70a2231969134cc40244bcdb3a7fa3 429 PANTHER PTHR13847 1 427 1.3E-119 T 13-09-2016 PMA3_RS11045 1e70a2231969134cc40244bcdb3a7fa3 429 PANTHER PTHR13847:SF196 1 427 1.3E-119 T 13-09-2016 PMA3_RS28715 a650a0347bca2ed2fa1ebf3fed401734 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 569 4.5E-226 T 13-09-2016 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative PMA3_RS28715 a650a0347bca2ed2fa1ebf3fed401734 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 283 3.4E-11 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28715 a650a0347bca2ed2fa1ebf3fed401734 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 389 557 2.2E-6 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28715 a650a0347bca2ed2fa1ebf3fed401734 574 PANTHER PTHR30193:SF3 33 292 1.3E-60 T 13-09-2016 PMA3_RS28715 a650a0347bca2ed2fa1ebf3fed401734 574 SUPERFAMILY SSF161098 32 283 1.31E-43 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28715 a650a0347bca2ed2fa1ebf3fed401734 574 PANTHER PTHR30193 33 292 1.3E-60 T 13-09-2016 PMA3_RS28715 a650a0347bca2ed2fa1ebf3fed401734 574 SUPERFAMILY SSF161098 307 556 1.5E-31 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28715 a650a0347bca2ed2fa1ebf3fed401734 574 Gene3D G3DSA:1.10.3720.10 301 553 6.9E-27 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28715 a650a0347bca2ed2fa1ebf3fed401734 574 Gene3D G3DSA:1.10.3720.10 33 284 5.9E-44 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS20535 a63839ba4bf4190fc1071825cab75da5 246 PIRSF PIRSF000857 3 241 2.0E-81 T 13-09-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 PMA3_RS20535 a63839ba4bf4190fc1071825cab75da5 246 PANTHER PTHR23293 6 240 1.3E-108 T 13-09-2016 PMA3_RS20535 a63839ba4bf4190fc1071825cab75da5 246 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 34 211 5.4E-48 T 13-09-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 PMA3_RS20535 a63839ba4bf4190fc1071825cab75da5 246 Gene3D G3DSA:3.40.50.620 9 207 2.9E-51 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS20535 a63839ba4bf4190fc1071825cab75da5 246 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 40 235 5.5E-85 T 13-09-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 PMA3_RS20535 a63839ba4bf4190fc1071825cab75da5 246 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 19 236 5.7E-51 T 13-09-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 PMA3_RS20535 a63839ba4bf4190fc1071825cab75da5 246 SUPERFAMILY SSF52402 14 199 1.55E-45 T 13-09-2016 PMA3_RS20535 a63839ba4bf4190fc1071825cab75da5 246 PANTHER PTHR23293:SF11 6 240 1.3E-108 T 13-09-2016 PMA3_RS20535 a63839ba4bf4190fc1071825cab75da5 246 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 2 237 35.478 T 13-09-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 PMA3_RS21670 4d39edf2dfca7e07c5b62b1fd4d8d508 151 PANTHER PTHR38766:SF1 8 151 1.6E-28 T 13-09-2016 PMA3_RS21670 4d39edf2dfca7e07c5b62b1fd4d8d508 151 Pfam PF04347 Flagellar biosynthesis protein, FliO 63 143 7.8E-19 T 13-09-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PMA3_RS21670 4d39edf2dfca7e07c5b62b1fd4d8d508 151 PANTHER PTHR38766 8 151 1.6E-28 T 13-09-2016 PMA3_RS21670 4d39edf2dfca7e07c5b62b1fd4d8d508 151 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 51 119 9.6E-22 T 13-09-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 Pfam PF00005 ABC transporter 19 182 1.3E-23 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 Pfam PF00005 ABC transporter 334 467 2.2E-22 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 SUPERFAMILY SSF52540 3 94 2.03E-47 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 SUPERFAMILY SSF52540 123 233 2.03E-47 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 PANTHER PTHR19211 544 581 5.3E-206 T 13-09-2016 PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 PANTHER PTHR19211 1 525 5.3E-206 T 13-09-2016 PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 SUPERFAMILY SSF52540 307 531 1.81E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 SMART SM00382 342 512 1.1E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 SMART SM00382 28 227 2.9E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 Gene3D G3DSA:3.40.50.300 2 267 1.2E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 Gene3D G3DSA:3.40.50.300 319 540 1.2E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 Pfam PF16326 ABC transporter C-terminal domain 569 637 4.5E-22 T 13-09-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 PMA3_RS08590 b754c722b13eba7fbabfbcc2720db236 638 Pfam PF12848 ABC transporter 221 297 1.9E-8 T 13-09-2016 IPR032781 ABC-transporter extension domain PMA3_RS11800 a954a1aca0f7d8bf68be92f39263f6b8 397 PANTHER PTHR10909 1 395 8.3E-122 T 13-09-2016 PMA3_RS11800 a954a1aca0f7d8bf68be92f39263f6b8 397 SUPERFAMILY SSF47203 238 388 7.41E-19 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11800 a954a1aca0f7d8bf68be92f39263f6b8 397 Gene3D G3DSA:2.40.110.10 129 226 1.8E-31 T 13-09-2016 PMA3_RS11800 a954a1aca0f7d8bf68be92f39263f6b8 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 125 3.9E-18 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11800 a954a1aca0f7d8bf68be92f39263f6b8 397 Gene3D G3DSA:1.20.140.10 227 394 9.4E-26 T 13-09-2016 PMA3_RS11800 a954a1aca0f7d8bf68be92f39263f6b8 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 225 1.0E-21 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS11800 a954a1aca0f7d8bf68be92f39263f6b8 397 Gene3D G3DSA:1.10.540.10 5 126 1.9E-22 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11800 a954a1aca0f7d8bf68be92f39263f6b8 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 387 1.1E-21 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11800 a954a1aca0f7d8bf68be92f39263f6b8 397 PANTHER PTHR10909:SF229 1 395 8.3E-122 T 13-09-2016 PMA3_RS11800 a954a1aca0f7d8bf68be92f39263f6b8 397 SUPERFAMILY SSF56645 7 249 1.19E-61 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 Gene3D G3DSA:3.50.50.60 330 435 3.0E-29 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 Gene3D G3DSA:3.50.50.60 209 329 1.9E-24 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 Gene3D G3DSA:3.40.30.10 1 93 1.0E-32 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 SUPERFAMILY SSF52833 1 100 8.16E-31 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 502 3.1E-48 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PANTHER PTHR22912 198 512 5.0E-209 T 13-09-2016 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 Gene3D G3DSA:3.50.50.60 436 514 2.7E-15 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PIRSF PIRSF000238 1 519 1.1E-267 T 13-09-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 343 363 - T 13-09-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 Pfam PF13192 Thioredoxin domain 124 192 3.1E-7 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 3.9E-67 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 3.9E-67 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 351 375 3.9E-67 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 476 494 3.9E-67 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 403 419 3.9E-67 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 3.9E-67 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 336 348 3.9E-67 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 314 322 3.9E-67 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 442 463 3.9E-67 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 Gene3D G3DSA:3.40.30.10 104 195 1.1E-34 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 SUPERFAMILY SSF51905 196 512 7.13E-53 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 515 1.5E-243 T 13-09-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 SUPERFAMILY SSF52833 106 195 4.85E-20 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PANTHER PTHR22912:SF107 198 512 5.0E-209 T 13-09-2016 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 373 2.8E-41 T 13-09-2016 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 440 456 2.8E-41 T 13-09-2016 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 466 488 2.8E-41 T 13-09-2016 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 313 331 2.8E-41 T 13-09-2016 PMA3_RS15925 039e7940c674a4e0574ec07f778c308d 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 2.8E-41 T 13-09-2016 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 Pfam PF01225 Mur ligase family, catalytic domain 18 94 8.5E-12 T 13-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 SUPERFAMILY SSF63418 8 95 1.44E-21 T 13-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 SUPERFAMILY SSF53244 329 480 2.75E-46 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 PANTHER PTHR23135 5 486 5.6E-196 T 13-09-2016 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 410 3.8E-21 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 17 479 3.7E-155 T 13-09-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 Gene3D G3DSA:3.90.190.20 331 471 4.1E-55 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 Gene3D G3DSA:3.40.1190.10 97 330 6.5E-81 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 PANTHER PTHR23135:SF4 5 486 5.6E-196 T 13-09-2016 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 Gene3D G3DSA:3.40.1390.10 7 95 5.0E-25 T 13-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 SUPERFAMILY SSF53623 97 326 5.23E-76 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 479 34.37 T 13-09-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 PMA3_RS04120 b95acfc4c040cde653a50b1ab0c15e0d 487 Pfam PF08245 Mur ligase middle domain 106 306 1.9E-53 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS00610 3a7d108bdfb48b2fe13fb9909c0b006f 193 SUPERFAMILY SSF53474 9 178 4.23E-35 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS00610 3a7d108bdfb48b2fe13fb9909c0b006f 193 Pfam PF06821 Serine hydrolase 8 179 9.2E-67 T 13-09-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- PMA3_RS00610 3a7d108bdfb48b2fe13fb9909c0b006f 193 Gene3D G3DSA:3.40.50.1820 7 184 4.4E-48 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS09580 029be8a562db51f4dda4b9ffca105000 318 PANTHER PTHR24220 11 311 2.8E-136 T 13-09-2016 PMA3_RS09580 029be8a562db51f4dda4b9ffca105000 318 PANTHER PTHR24220:SF336 11 311 2.8E-136 T 13-09-2016 PMA3_RS09580 029be8a562db51f4dda4b9ffca105000 318 Pfam PF00005 ABC transporter 30 177 1.1E-30 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS09580 029be8a562db51f4dda4b9ffca105000 318 Gene3D G3DSA:3.40.50.300 4 257 1.4E-78 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09580 029be8a562db51f4dda4b9ffca105000 318 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 228 293 2.8E-21 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS09580 029be8a562db51f4dda4b9ffca105000 318 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS09580 029be8a562db51f4dda4b9ffca105000 318 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 226 311 2.5E-27 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS09580 029be8a562db51f4dda4b9ffca105000 318 SUPERFAMILY SSF52540 9 248 4.75E-67 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09580 029be8a562db51f4dda4b9ffca105000 318 SMART SM00382 38 226 1.1E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS05900 dceed385f9a30a2f6890b8f08e19a44c 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 116 8.2E-42 T 13-09-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 PMA3_RS05900 dceed385f9a30a2f6890b8f08e19a44c 117 PANTHER PTHR30041:SF4 1 116 6.0E-54 T 13-09-2016 PMA3_RS05900 dceed385f9a30a2f6890b8f08e19a44c 117 PANTHER PTHR30041 1 116 6.0E-54 T 13-09-2016 PMA3_RS05900 dceed385f9a30a2f6890b8f08e19a44c 117 SUPERFAMILY SSF52833 4 116 1.66E-34 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS05900 dceed385f9a30a2f6890b8f08e19a44c 117 Pfam PF03960 ArsC family 7 114 4.6E-19 T 13-09-2016 IPR006660 Arsenate reductase-like PMA3_RS05900 dceed385f9a30a2f6890b8f08e19a44c 117 Gene3D G3DSA:3.40.30.10 1 117 1.2E-46 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 SUPERFAMILY SSF102114 11 318 3.14E-88 T 13-09-2016 PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 Pfam PF04055 Radical SAM superfamily 56 210 1.2E-13 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 SMART SM00729 49 261 4.3E-37 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 PANTHER PTHR22976 13 351 9.7E-183 T 13-09-2016 PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 Gene3D G3DSA:3.20.20.70 11 318 3.2E-99 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 PIRSF PIRSF001619 1 325 1.3E-131 T 13-09-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 PANTHER PTHR22976:SF1 13 351 9.7E-183 T 13-09-2016 PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 TIGRFAM TIGR00433 bioB: biotin synthase 21 316 3.1E-122 T 13-09-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 Hamap MF_01694 Biotin synthase [bioB]. 11 319 41.404 T 13-09-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 226 316 4.2E-19 T 13-09-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PMA3_RS27790 6d4531c936105a3e8043eaccc2be85b5 351 SMART SM00876 226 318 3.2E-46 T 13-09-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 8.0E-21 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 PANTHER PTHR26402 2 208 3.4E-65 T 13-09-2016 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 5.0E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 5.0E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 5.0E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 PANTHER PTHR26402:SF151 2 208 3.4E-65 T 13-09-2016 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 Pfam PF00072 Response regulator receiver domain 4 115 8.5E-27 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 SUPERFAMILY SSF52172 2 135 4.27E-33 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 SMART SM00421 145 202 1.3E-19 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 Gene3D G3DSA:1.10.10.10 119 208 5.6E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 SMART SM00448 2 114 3.9E-31 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 SUPERFAMILY SSF46894 141 208 9.18E-19 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS23740 8a39d689361ec464c954d604accbbb4d 208 Gene3D G3DSA:3.40.50.2300 1 118 4.1E-33 T 13-09-2016 PMA3_RS25195 68fb12253e0ed117f753e5a387629d52 163 Pfam PF04093 rod shape-determining protein MreD 8 150 1.4E-32 T 13-09-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PMA3_RS25195 68fb12253e0ed117f753e5a387629d52 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 153 1.4E-35 T 13-09-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PMA3_RS25195 68fb12253e0ed117f753e5a387629d52 163 PANTHER PTHR37484 2 163 1.6E-56 T 13-09-2016 PMA3_RS25195 68fb12253e0ed117f753e5a387629d52 163 PIRSF PIRSF018472 1 163 3.4E-51 T 13-09-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 SMART SM00420 6 58 5.2E-22 T 13-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 SUPERFAMILY SSF100950 74 232 5.8E-29 T 13-09-2016 PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.0E-20 T 13-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 Pfam PF00455 DeoR C terminal sensor domain 75 231 8.5E-52 T 13-09-2016 IPR014036 DeoR C-terminal sensor domain PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 PANTHER PTHR30363 1 251 2.5E-108 T 13-09-2016 PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 Gene3D G3DSA:3.30.750.70 71 147 7.3E-14 T 13-09-2016 PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 SMART SM01134 72 232 1.1E-69 T 13-09-2016 PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 PANTHER PTHR30363:SF1 1 251 2.5E-108 T 13-09-2016 PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 Gene3D G3DSA:1.10.10.10 1 62 2.5E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-09-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 SUPERFAMILY SSF46785 3 67 1.65E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-10 T 13-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PMA3_RS23830 322c62f7e5ff38b5697e351bc7ec2280 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-10 T 13-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 Pfam PF05193 Peptidase M16 inactive domain 559 729 1.7E-15 T 13-09-2016 IPR007863 Peptidase M16, C-terminal PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 Pfam PF05193 Peptidase M16 inactive domain 162 330 1.2E-11 T 13-09-2016 IPR007863 Peptidase M16, C-terminal PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 SUPERFAMILY SSF63411 249 399 4.67E-14 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 SUPERFAMILY SSF63411 618 798 1.83E-15 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 PANTHER PTHR11851 685 796 6.4E-12 T 13-09-2016 PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 PANTHER PTHR11851 145 281 6.4E-12 T 13-09-2016 PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 Gene3D G3DSA:3.30.830.10 684 794 1.8E-10 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 Gene3D G3DSA:3.30.830.10 284 394 3.3E-10 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 SUPERFAMILY SSF63411 396 606 1.01E-23 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 Gene3D G3DSA:3.30.830.10 9 211 1.8E-20 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 Gene3D G3DSA:3.30.830.10 406 607 9.3E-21 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28580 cf4cdfb0efc128c677f8047e5ff206ef 804 SUPERFAMILY SSF63411 7 210 1.35E-21 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS23175 2b9b585b7e14a77e3eb4839787a05935 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 122 27.507 T 13-09-2016 IPR002930 Glycine cleavage system H-protein PMA3_RS23175 2b9b585b7e14a77e3eb4839787a05935 126 SUPERFAMILY SSF51230 2 120 9.42E-36 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS23175 2b9b585b7e14a77e3eb4839787a05935 126 Pfam PF01597 Glycine cleavage H-protein 4 120 1.4E-38 T 13-09-2016 IPR002930 Glycine cleavage system H-protein PMA3_RS23175 2b9b585b7e14a77e3eb4839787a05935 126 PANTHER PTHR11715 2 121 9.0E-56 T 13-09-2016 IPR002930 Glycine cleavage system H-protein PMA3_RS23175 2b9b585b7e14a77e3eb4839787a05935 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 121 1.5E-41 T 13-09-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 PMA3_RS23175 2b9b585b7e14a77e3eb4839787a05935 126 Gene3D G3DSA:2.40.50.100 3 121 5.8E-43 T 13-09-2016 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Pfam PF00072 Response regulator receiver domain 1261 1372 1.0E-22 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SUPERFAMILY SSF52738 22 208 9.15E-50 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1125 1237 3.5E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 PRINTS PR00996 Glutamate methyltransferase family signature 259 272 2.9E-30 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 PRINTS PR00996 Glutamate methyltransferase family signature 296 308 2.9E-30 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 PRINTS PR00996 Glutamate methyltransferase family signature 461 484 2.9E-30 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 PRINTS PR00996 Glutamate methyltransferase family signature 376 392 2.9E-30 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 PRINTS PR00996 Glutamate methyltransferase family signature 442 456 2.9E-30 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 PRINTS PR00996 Glutamate methyltransferase family signature 340 360 2.9E-30 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Gene3D G3DSA:1.10.287.130 1006 1063 5.0E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 PANTHER PTHR24422:SF6 114 873 1.6E-209 T 13-09-2016 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SUPERFAMILY SSF55785 768 872 9.25E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SMART SM00138 237 502 2.7E-116 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Pfam PF01339 CheB methylesterase 27 202 5.9E-48 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SMART SM00388 1010 1078 6.6E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Gene3D G3DSA:3.30.450.20 757 874 2.0E-8 T 13-09-2016 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 875 996 3.4E-18 T 13-09-2016 IPR000014 PAS domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Pfam PF13426 PAS domain 889 988 2.3E-8 T 13-09-2016 IPR000014 PAS domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SMART SM00387 1124 1238 8.5E-35 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Gene3D G3DSA:3.40.50.2300 1258 1377 2.7E-33 T 13-09-2016 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Pfam PF13596 PAS domain 757 861 2.6E-23 T 13-09-2016 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SUPERFAMILY SSF53335 303 501 1.98E-51 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Pfam PF01739 CheR methyltransferase, SAM binding domain 304 494 5.4E-58 T 13-09-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Gene3D G3DSA:3.30.450.20 875 988 9.4E-23 T 13-09-2016 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SUPERFAMILY SSF47384 993 1079 4.71E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Pfam PF03705 CheR methyltransferase, all-alpha domain 244 290 6.8E-12 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SMART SM00448 1259 1372 4.5E-31 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Gene3D G3DSA:1.10.155.10 231 299 6.9E-13 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SUPERFAMILY SSF47757 239 305 3.14E-12 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Gene3D G3DSA:3.30.565.10 1064 1239 5.6E-40 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Gene3D G3DSA:3.40.50.180 19 208 1.2E-57 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Gene3D G3DSA:3.40.50.150 302 501 1.3E-66 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SUPERFAMILY SSF52172 1258 1377 1.99E-32 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SUPERFAMILY SSF55785 860 985 6.11E-21 T 13-09-2016 IPR000014 PAS domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 PANTHER PTHR24422 114 873 1.6E-209 T 13-09-2016 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SUPERFAMILY SSF55874 1067 1237 1.7E-40 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SMART SM00091 876 942 1.2E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SMART SM00091 543 608 1.4 T 13-09-2016 IPR000014 PAS domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 SMART SM00091 755 820 2.9 T 13-09-2016 IPR000014 PAS domain PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1011 1078 3.5E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS10470 d9a0ddd0df7530386d5bc4833094330e 1381 Gene3D G3DSA:3.30.450.20 545 650 3.2E-5 T 13-09-2016 PMA3_RS13325 f986ef133be697b886d68b819c0873ba 395 PANTHER PTHR23517:SF4 1 392 2.8E-116 T 13-09-2016 PMA3_RS13325 f986ef133be697b886d68b819c0873ba 395 SUPERFAMILY SSF103473 18 393 9.68E-44 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS13325 f986ef133be697b886d68b819c0873ba 395 Gene3D G3DSA:1.20.1250.20 220 391 5.7E-12 T 13-09-2016 PMA3_RS13325 f986ef133be697b886d68b819c0873ba 395 Gene3D G3DSA:1.20.1250.20 19 196 2.7E-18 T 13-09-2016 PMA3_RS13325 f986ef133be697b886d68b819c0873ba 395 Pfam PF07690 Major Facilitator Superfamily 22 279 7.2E-15 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS13325 f986ef133be697b886d68b819c0873ba 395 PANTHER PTHR23517 1 392 2.8E-116 T 13-09-2016 PMA3_RS28185 5c8fc570d1c6c014e44065928d16c3b0 222 Pfam PF08787 Alginate lyase 2 220 4.0E-54 T 13-09-2016 IPR014895 Alginate lyase 2 PMA3_RS28185 5c8fc570d1c6c014e44065928d16c3b0 222 SUPERFAMILY SSF49899 2 221 4.43E-69 T 13-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PMA3_RS28185 5c8fc570d1c6c014e44065928d16c3b0 222 Gene3D G3DSA:2.60.120.200 1 221 6.0E-59 T 13-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 6.3E-18 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 13-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 SUPERFAMILY SSF48498 83 203 2.0E-17 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 PANTHER PTHR30328 1 208 4.9E-47 T 13-09-2016 PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 Gene3D G3DSA:1.10.10.60 2 61 7.9E-23 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.1E-11 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.1E-11 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 2.7E-36 T 13-09-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 PANTHER PTHR30328:SF26 1 208 4.9E-47 T 13-09-2016 PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 SUPERFAMILY SSF46689 2 77 2.67E-20 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS05460 db4991374b7f87a0f5b748b1b7483bad 210 Gene3D G3DSA:1.10.357.10 62 206 6.7E-20 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 PANTHER PTHR30161:SF1 3 708 0.0 T 13-09-2016 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 13-09-2016 IPR025505 FHIPEP conserved site PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.5E-55 T 13-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.5E-55 T 13-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.5E-55 T 13-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.5E-55 T 13-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.5E-55 T 13-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.5E-55 T 13-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 Pfam PF00771 FHIPEP family 31 697 2.3E-262 T 13-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 21 705 3.0E-257 T 13-09-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 PANTHER PTHR30161 3 708 0.0 T 13-09-2016 PMA3_RS21620 152b32b293e989aeedd7f8270152600f 709 PIRSF PIRSF005419 5 708 6.7E-243 T 13-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PMA3_RS08865 be9aed2d1ad779cfdf6223a5c73f5e67 282 SUPERFAMILY SSF54001 9 261 1.29E-78 T 13-09-2016 PMA3_RS08865 be9aed2d1ad779cfdf6223a5c73f5e67 282 Pfam PF00797 N-acetyltransferase 25 260 9.1E-66 T 13-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PMA3_RS08865 be9aed2d1ad779cfdf6223a5c73f5e67 282 PANTHER PTHR11786 12 281 4.3E-69 T 13-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PMA3_RS08865 be9aed2d1ad779cfdf6223a5c73f5e67 282 Gene3D G3DSA:3.30.2140.10 187 261 2.6E-13 T 13-09-2016 PMA3_RS08865 be9aed2d1ad779cfdf6223a5c73f5e67 282 Gene3D G3DSA:3.30.2140.10 9 166 1.0E-34 T 13-09-2016 PMA3_RS08865 be9aed2d1ad779cfdf6223a5c73f5e67 282 PANTHER PTHR11786:SF0 12 281 4.3E-69 T 13-09-2016 PMA3_RS08865 be9aed2d1ad779cfdf6223a5c73f5e67 282 PRINTS PR01543 Arylamine N-acetyltransferase signature 25 48 3.0E-10 T 13-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PMA3_RS08865 be9aed2d1ad779cfdf6223a5c73f5e67 282 PRINTS PR01543 Arylamine N-acetyltransferase signature 106 131 3.0E-10 T 13-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PMA3_RS08865 be9aed2d1ad779cfdf6223a5c73f5e67 282 PRINTS PR01543 Arylamine N-acetyltransferase signature 49 72 3.0E-10 T 13-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PMA3_RS08865 be9aed2d1ad779cfdf6223a5c73f5e67 282 PRINTS PR01543 Arylamine N-acetyltransferase signature 73 95 3.0E-10 T 13-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PMA3_RS22585 25392677f082f8887c4d9dd83f37ce22 325 Gene3D G3DSA:3.40.190.10 123 207 3.8E-4 T 13-09-2016 PMA3_RS22585 25392677f082f8887c4d9dd83f37ce22 325 PANTHER PTHR30349:SF29 1 286 3.9E-184 T 13-09-2016 PMA3_RS22585 25392677f082f8887c4d9dd83f37ce22 325 PANTHER PTHR30349 1 286 3.9E-184 T 13-09-2016 PMA3_RS22585 25392677f082f8887c4d9dd83f37ce22 325 PIRSF PIRSF017082 1 325 9.6E-79 T 13-09-2016 IPR005064 Bordetella uptake gene GO:0030288 PMA3_RS22585 25392677f082f8887c4d9dd83f37ce22 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 322 4.9E-21 T 13-09-2016 IPR005064 Bordetella uptake gene GO:0030288 PMA3_RS22585 25392677f082f8887c4d9dd83f37ce22 325 SUPERFAMILY SSF53850 56 229 1.33E-10 T 13-09-2016 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Gene3D G3DSA:3.30.470.30 127 259 2.2E-50 T 13-09-2016 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 SUPERFAMILY SSF50249 326 407 7.37E-28 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 704 772 1.2E-9 T 13-09-2016 IPR001357 BRCT domain PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 324 6.9E-129 T 13-09-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 SUPERFAMILY SSF56091 3 323 2.16E-118 T 13-09-2016 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 SMART SM00532 3 467 1.3E-258 T 13-09-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 PANTHER PTHR23389 1 552 7.6E-201 T 13-09-2016 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Hamap MF_01588 DNA ligase [ligA]. 2 778 51.588 T 13-09-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 414 453 1.0E-10 T 13-09-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Pfam PF12826 Helix-hairpin-helix motif 624 680 9.6E-7 T 13-09-2016 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Pfam PF12826 Helix-hairpin-helix motif 529 592 1.8E-20 T 13-09-2016 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 608 5.1E-224 T 13-09-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Gene3D G3DSA:1.10.150.20 454 522 3.8E-27 T 13-09-2016 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Gene3D G3DSA:2.40.50.140 327 398 1.3E-33 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 SUPERFAMILY SSF47781 411 603 2.19E-52 T 13-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 SMART SM00292 704 781 4.3E-7 T 13-09-2016 IPR001357 BRCT domain PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Gene3D G3DSA:1.10.287.610 2 67 2.0E-29 T 13-09-2016 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Gene3D G3DSA:1.10.150.20 523 603 3.7E-26 T 13-09-2016 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Gene3D G3DSA:1.10.150.20 615 697 1.5E-17 T 13-09-2016 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 338 353 - T 13-09-2016 IPR033136 NAD-dependent DNA ligase, conserved site PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 329 405 1.9E-34 T 13-09-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 SUPERFAMILY SSF52113 705 776 4.49E-16 T 13-09-2016 IPR001357 BRCT domain PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 Gene3D G3DSA:3.40.50.10190 705 779 7.5E-22 T 13-09-2016 IPR001357 BRCT domain PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 123 152 - T 13-09-2016 IPR018239 NAD-dependent DNA ligase, active site PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 SUPERFAMILY SSF47781 611 695 3.18E-12 T 13-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 SMART SM00278 531 550 140.0 T 13-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 SMART SM00278 465 484 6.8 T 13-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 SMART SM00278 499 518 2200.0 T 13-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PMA3_RS20320 0ca3640d203e12bdeeb42147b20ca9ce 785 PANTHER PTHR23389:SF9 1 552 7.6E-201 T 13-09-2016 PMA3_RS21090 0e8d445d48f0e14fd6bcedc6bb476196 191 SUPERFAMILY SSF53254 1 185 8.57E-46 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS21090 0e8d445d48f0e14fd6bcedc6bb476196 191 Gene3D G3DSA:3.40.50.1240 1 186 1.6E-46 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS21090 0e8d445d48f0e14fd6bcedc6bb476196 191 PANTHER PTHR23029 1 168 6.3E-35 T 13-09-2016 PMA3_RS21090 0e8d445d48f0e14fd6bcedc6bb476196 191 SMART SM00855 4 154 1.6E-13 T 13-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PMA3_RS21090 0e8d445d48f0e14fd6bcedc6bb476196 191 PIRSF PIRSF000709 5 189 1.9E-6 T 13-09-2016 PMA3_RS21090 0e8d445d48f0e14fd6bcedc6bb476196 191 PANTHER PTHR23029:SF1 1 168 6.3E-35 T 13-09-2016 PMA3_RS21090 0e8d445d48f0e14fd6bcedc6bb476196 191 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 185 3.4E-44 T 13-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PMA3_RS04635 69f48c5f5147536d4373d33838426bc5 304 Gene3D G3DSA:3.40.50.1820 39 267 5.4E-39 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS04635 69f48c5f5147536d4373d33838426bc5 304 Pfam PF12146 Serine aminopeptidase, S33 64 168 7.3E-13 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS04635 69f48c5f5147536d4373d33838426bc5 304 SUPERFAMILY SSF53474 29 272 4.71E-42 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS04635 69f48c5f5147536d4373d33838426bc5 304 PANTHER PTHR12277 19 261 1.4E-43 T 13-09-2016 PMA3_RS04635 69f48c5f5147536d4373d33838426bc5 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 153 166 8.1E-8 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS04635 69f48c5f5147536d4373d33838426bc5 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 139 152 8.1E-8 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS04635 69f48c5f5147536d4373d33838426bc5 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 107 8.1E-8 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS12735 e11042068df6901ba37eef3c5f955eab 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 9.0E-14 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12735 e11042068df6901ba37eef3c5f955eab 289 Gene3D G3DSA:3.40.190.10 195 250 2.6E-5 T 13-09-2016 PMA3_RS12735 e11042068df6901ba37eef3c5f955eab 289 PANTHER PTHR30579:SF6 1 287 1.6E-109 T 13-09-2016 PMA3_RS12735 e11042068df6901ba37eef3c5f955eab 289 PANTHER PTHR30579 1 287 1.6E-109 T 13-09-2016 PMA3_RS12735 e11042068df6901ba37eef3c5f955eab 289 SUPERFAMILY SSF46785 5 108 4.99E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12735 e11042068df6901ba37eef3c5f955eab 289 SUPERFAMILY SSF53850 92 255 2.17E-23 T 13-09-2016 PMA3_RS12735 e11042068df6901ba37eef3c5f955eab 289 Pfam PF03466 LysR substrate binding domain 92 249 2.2E-22 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS12735 e11042068df6901ba37eef3c5f955eab 289 Gene3D G3DSA:3.40.190.10 91 194 2.4E-17 T 13-09-2016 PMA3_RS12735 e11042068df6901ba37eef3c5f955eab 289 Gene3D G3DSA:1.10.10.10 5 86 1.6E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14775 d2fa3e48062b29c75293823afcf79244 357 SUPERFAMILY SSF51905 3 168 1.27E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14775 d2fa3e48062b29c75293823afcf79244 357 SUPERFAMILY SSF51905 255 339 1.27E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14775 d2fa3e48062b29c75293823afcf79244 357 Pfam PF00890 FAD binding domain 5 34 2.0E-8 T 13-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PMA3_RS14775 d2fa3e48062b29c75293823afcf79244 357 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 9.6E-10 T 13-09-2016 PMA3_RS14775 d2fa3e48062b29c75293823afcf79244 357 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 259 274 9.6E-10 T 13-09-2016 PMA3_RS14775 d2fa3e48062b29c75293823afcf79244 357 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 9.6E-10 T 13-09-2016 PMA3_RS14775 d2fa3e48062b29c75293823afcf79244 357 Gene3D G3DSA:3.50.50.60 3 173 3.2E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14775 d2fa3e48062b29c75293823afcf79244 357 Gene3D G3DSA:3.50.50.60 251 294 3.2E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14775 d2fa3e48062b29c75293823afcf79244 357 Pfam PF04820 Tryptophan halogenase 97 316 7.4E-10 T 13-09-2016 IPR006905 Tryptophan halogenase PMA3_RS14775 d2fa3e48062b29c75293823afcf79244 357 PANTHER PTHR10617 3 332 1.3E-29 T 13-09-2016 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 2.0E-75 T 13-09-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 310 335 2.0E-75 T 13-09-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.0E-75 T 13-09-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.0E-75 T 13-09-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 2.0E-75 T 13-09-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.0E-75 T 13-09-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 PIRSF PIRSF500210 1 336 1.1E-126 T 13-09-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 Gene3D G3DSA:3.40.190.80 199 335 1.6E-57 T 13-09-2016 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 SUPERFAMILY SSF56655 2 334 2.82E-115 T 13-09-2016 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 336 47.055 T 13-09-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 Gene3D G3DSA:3.30.540.10 4 197 6.1E-75 T 13-09-2016 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 PANTHER PTHR11556 4 336 9.4E-156 T 13-09-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 197 1.9E-58 T 13-09-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PMA3_RS01225 ee068ecad378276f59fe8af35c0af5f5 336 PIRSF PIRSF000904 1 336 4.0E-125 T 13-09-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 PANTHER PTHR30483 13 363 1.1E-152 T 13-09-2016 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 PANTHER PTHR30483:SF16 13 363 1.1E-152 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 Pfam PF13458 Periplasmic binding protein 29 364 1.9E-63 T 13-09-2016 IPR028081 Leucine-binding protein domain PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 Gene3D G3DSA:3.40.50.2300 28 228 9.8E-69 T 13-09-2016 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 2.3E-48 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 2.3E-48 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 2.3E-48 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 92 102 2.3E-48 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 281 294 2.3E-48 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 2.3E-48 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 2.3E-48 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS05330 e9cb90d729ef14fc0bb04c7ef7250c1c 375 SUPERFAMILY SSF53822 28 368 4.19E-96 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 Gene3D G3DSA:1.10.10.60 291 336 3.0E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 PANTHER PTHR11019 82 337 3.0E-52 T 13-09-2016 PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 PANTHER PTHR11019 38 57 3.0E-52 T 13-09-2016 PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 Gene3D G3DSA:1.10.10.60 239 290 2.9E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 PANTHER PTHR11019:SF90 82 337 3.0E-52 T 13-09-2016 PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 PANTHER PTHR11019:SF90 38 57 3.0E-52 T 13-09-2016 PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 Pfam PF12833 Helix-turn-helix domain 260 335 3.9E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 SMART SM00342 254 337 1.6E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 Pfam PF01965 DJ-1/PfpI family 50 202 2.0E-17 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 SUPERFAMILY SSF46689 290 338 9.41E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 SUPERFAMILY SSF46689 240 288 2.02E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 Gene3D G3DSA:3.40.50.880 33 221 8.7E-33 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS19320 e3557604b1597c65ada603c65aeb48fc 341 SUPERFAMILY SSF52317 33 219 6.11E-35 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS20285 fc391f9e6715559287afa8a4e53f84c5 112 Gene3D G3DSA:3.30.1310.10 1 112 4.2E-45 T 13-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PMA3_RS20285 fc391f9e6715559287afa8a4e53f84c5 112 PANTHER PTHR33449:SF1 1 112 9.1E-45 T 13-09-2016 PMA3_RS20285 fc391f9e6715559287afa8a4e53f84c5 112 SUPERFAMILY SSF82607 10 106 1.05E-32 T 13-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PMA3_RS20285 fc391f9e6715559287afa8a4e53f84c5 112 PANTHER PTHR33449 1 112 9.1E-45 T 13-09-2016 PMA3_RS20285 fc391f9e6715559287afa8a4e53f84c5 112 PIRSF PIRSF004555 2 112 1.1E-35 T 13-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PMA3_RS20285 fc391f9e6715559287afa8a4e53f84c5 112 Pfam PF02575 YbaB/EbfC DNA-binding family 10 102 1.7E-33 T 13-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PMA3_RS20285 fc391f9e6715559287afa8a4e53f84c5 112 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 108 4.7E-32 T 13-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PMA3_RS20285 fc391f9e6715559287afa8a4e53f84c5 112 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 101 22.833 T 13-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 118 411 4.0E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 344 360 5.2E-14 T 13-09-2016 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 118 137 5.2E-14 T 13-09-2016 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 232 5.2E-14 T 13-09-2016 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 277 5.2E-14 T 13-09-2016 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 SUPERFAMILY SSF55424 423 500 7.83E-19 T 13-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 Gene3D G3DSA:3.50.50.60 221 420 2.1E-39 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 SUPERFAMILY SSF51905 258 420 4.87E-22 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 Pfam PF00355 Rieske [2Fe-2S] domain 5 89 4.7E-15 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 SUPERFAMILY SSF50022 2 103 6.42E-27 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 SUPERFAMILY SSF51905 114 303 6.48E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 117 139 3.1E-16 T 13-09-2016 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 359 3.1E-16 T 13-09-2016 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 383 390 3.1E-16 T 13-09-2016 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 284 3.1E-16 T 13-09-2016 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 Gene3D G3DSA:3.50.50.60 114 220 9.0E-27 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 PANTHER PTHR22912 102 482 1.2E-105 T 13-09-2016 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 Gene3D G3DSA:3.30.390.30 430 501 2.8E-12 T 13-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 PANTHER PTHR22912:SF180 102 482 1.2E-105 T 13-09-2016 PMA3_RS00485 47c42a083a4bcf99cf760d3b87135e5a 509 Gene3D G3DSA:2.102.10.10 2 100 1.8E-28 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS09185 70709d1e6db665730ddb21fd8c976198 222 SUPERFAMILY SSF89562 31 181 2.22E-39 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS09185 70709d1e6db665730ddb21fd8c976198 222 Pfam PF03737 Demethylmenaquinone methyltransferase 38 173 4.5E-31 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS09185 70709d1e6db665730ddb21fd8c976198 222 PANTHER PTHR33254 34 203 5.5E-30 T 13-09-2016 PMA3_RS09185 70709d1e6db665730ddb21fd8c976198 222 PANTHER PTHR33254:SF5 34 203 5.5E-30 T 13-09-2016 PMA3_RS09185 70709d1e6db665730ddb21fd8c976198 222 Gene3D G3DSA:3.50.30.40 40 180 1.0E-39 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 Pfam PF10415 Fumarase C C-terminus 402 454 8.4E-21 T 13-09-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 PANTHER PTHR11444:SF22 4 455 4.9E-284 T 13-09-2016 PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 ProSitePatterns PS00163 Fumarate lyases signature. 311 320 - T 13-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 PRINTS PR00149 Fumarate lyase superfamily signature 128 146 4.1E-28 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 PRINTS PR00149 Fumarate lyase superfamily signature 174 192 4.1E-28 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 PRINTS PR00149 Fumarate lyase superfamily signature 265 292 4.1E-28 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 PRINTS PR00149 Fumarate lyase superfamily signature 311 327 4.1E-28 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 Gene3D G3DSA:1.20.200.10 133 412 1.7E-84 T 13-09-2016 PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 PANTHER PTHR11444 4 455 4.9E-284 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 Pfam PF00206 Lyase 12 336 2.4E-96 T 13-09-2016 IPR022761 Fumarate lyase, N-terminal PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 SUPERFAMILY SSF48557 4 454 9.74E-137 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 Gene3D G3DSA:1.10.275.10 3 132 2.0E-51 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 PRINTS PR00145 Argininosuccinate lyase family signature 169 189 4.5E-6 T 13-09-2016 PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 PRINTS PR00145 Argininosuccinate lyase family signature 127 149 4.5E-6 T 13-09-2016 PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 327 4.5E-6 T 13-09-2016 PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 Gene3D G3DSA:1.10.40.30 413 457 8.1E-22 T 13-09-2016 PMA3_RS25145 8788cc295fd0c77f38b9533fa255e9d1 458 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 456 75.443 T 13-09-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS14885 b5e01079d5d15143e3489ff1c5c10cfe 276 Pfam PF00293 NUDIX domain 144 249 2.0E-19 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS14885 b5e01079d5d15143e3489ff1c5c10cfe 276 SUPERFAMILY SSF55811 93 256 6.23E-43 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS14885 b5e01079d5d15143e3489ff1c5c10cfe 276 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 20 105 1.1E-7 T 13-09-2016 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 PMA3_RS14885 b5e01079d5d15143e3489ff1c5c10cfe 276 SUPERFAMILY SSF55811 5 110 3.12E-23 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS14885 b5e01079d5d15143e3489ff1c5c10cfe 276 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 107 138 2.4E-11 T 13-09-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 PMA3_RS14885 b5e01079d5d15143e3489ff1c5c10cfe 276 Gene3D G3DSA:3.90.79.10 103 261 6.7E-43 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS14885 b5e01079d5d15143e3489ff1c5c10cfe 276 PANTHER PTHR11383:SF4 78 262 1.4E-57 T 13-09-2016 PMA3_RS14885 b5e01079d5d15143e3489ff1c5c10cfe 276 Hamap MF_00297 NADH pyrophosphatase [nudC]. 6 271 49.675 T 13-09-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 PMA3_RS14885 b5e01079d5d15143e3489ff1c5c10cfe 276 PANTHER PTHR11383 78 262 1.4E-57 T 13-09-2016 PMA3_RS25115 4dd166d5133b948690c74ab7b2eac119 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 2.9E-36 T 13-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PMA3_RS25115 4dd166d5133b948690c74ab7b2eac119 154 PANTHER PTHR30505 1 154 2.7E-67 T 13-09-2016 PMA3_RS25115 4dd166d5133b948690c74ab7b2eac119 154 PANTHER PTHR30505:SF6 1 154 2.7E-67 T 13-09-2016 PMA3_RS25115 4dd166d5133b948690c74ab7b2eac119 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 148 5.5E-56 T 13-09-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PMA3_RS25115 4dd166d5133b948690c74ab7b2eac119 154 SUPERFAMILY SSF55804 1 147 1.23E-41 T 13-09-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 PMA3_RS25115 4dd166d5133b948690c74ab7b2eac119 154 Gene3D G3DSA:3.40.930.10 1 151 5.1E-43 T 13-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 342 3.5E-88 T 13-09-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 Gene3D G3DSA:2.40.50.100 1156 1211 1.0E-5 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 PANTHER PTHR19376:SF32 570 943 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 PANTHER PTHR19376:SF32 963 1157 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 SUPERFAMILY SSF64484 1133 1363 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 SUPERFAMILY SSF64484 15 944 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 PANTHER PTHR19376 4 551 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1376 10.477 T 13-09-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 8.4E-20 T 13-09-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 PANTHER PTHR19376 963 1157 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 PANTHER PTHR19376 570 943 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 13-09-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 PANTHER PTHR19376 1177 1262 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 PANTHER PTHR19376:SF32 1177 1262 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 SMART SM00663 235 514 4.7E-185 T 13-09-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 PANTHER PTHR19376:SF32 1303 1387 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 PANTHER PTHR19376:SF32 4 551 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 PANTHER PTHR19376 1303 1387 0.0 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1316 4.8E-78 T 13-09-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 385 1.2E-7 T 13-09-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 3.7E-28 T 13-09-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 643 1.9E-29 T 13-09-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 Gene3D G3DSA:2.40.40.20 417 489 3.2E-37 T 13-09-2016 PMA3_RS27295 e5fd77d78fe13db1f13b58ac074281b2 1399 Gene3D G3DSA:2.40.40.20 349 376 3.2E-37 T 13-09-2016 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 PIRSF PIRSF036557 1 484 7.3E-210 T 13-09-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 SUPERFAMILY SSF54292 3 90 4.72E-17 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 Pfam PF01799 [2Fe-2S] binding domain 87 158 4.0E-29 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 PANTHER PTHR11908 1 471 1.9E-131 T 13-09-2016 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 Gene3D G3DSA:3.30.43.10 201 248 1.0E-22 T 13-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 SUPERFAMILY SSF55447 367 472 4.84E-36 T 13-09-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 Gene3D G3DSA:3.10.20.30 2 85 2.2E-25 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 SUPERFAMILY SSF56176 186 361 5.09E-53 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 470 4.4E-210 T 13-09-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 SMART SM01092 370 471 1.2E-35 T 13-09-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 Gene3D G3DSA:1.10.150.120 87 183 9.9E-36 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 370 470 6.0E-33 T 13-09-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 18 76 2.8E-5 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 Gene3D G3DSA:3.30.465.10 249 362 5.0E-35 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 SUPERFAMILY SSF47741 97 202 1.96E-32 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 199 362 6.9E-50 T 13-09-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PMA3_RS20340 958affd9b29e32ae7771e437cf9a4e53 484 Gene3D G3DSA:3.30.390.50 371 471 2.9E-38 T 13-09-2016 PMA3_RS17530 26a29fa30b3389fb30710c915f5638cc 344 SUPERFAMILY SSF46626 230 332 2.57E-14 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS17530 26a29fa30b3389fb30710c915f5638cc 344 SUPERFAMILY SSF52833 58 217 1.11E-34 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS17530 26a29fa30b3389fb30710c915f5638cc 344 PANTHER PTHR12151 63 267 1.7E-27 T 13-09-2016 IPR003782 Copper chaperone SCO1/SenC PMA3_RS17530 26a29fa30b3389fb30710c915f5638cc 344 Pfam PF00034 Cytochrome c 237 330 4.2E-10 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS17530 26a29fa30b3389fb30710c915f5638cc 344 Gene3D G3DSA:3.40.30.10 20 218 1.7E-34 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS17530 26a29fa30b3389fb30710c915f5638cc 344 Pfam PF02630 SCO1/SenC 63 174 2.2E-16 T 13-09-2016 IPR003782 Copper chaperone SCO1/SenC PMA3_RS17530 26a29fa30b3389fb30710c915f5638cc 344 PANTHER PTHR12151:SF0 63 267 1.7E-27 T 13-09-2016 PMA3_RS17530 26a29fa30b3389fb30710c915f5638cc 344 Gene3D G3DSA:1.10.760.10 235 330 4.7E-14 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS05105 566127071a0f82e146f4f030b230108d 353 Gene3D G3DSA:1.10.150.20 167 236 3.3E-24 T 13-09-2016 PMA3_RS05105 566127071a0f82e146f4f030b230108d 353 PANTHER PTHR11076 4 350 9.3E-180 T 13-09-2016 PMA3_RS05105 566127071a0f82e146f4f030b230108d 353 SUPERFAMILY SSF100879 244 350 3.14E-20 T 13-09-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS05105 566127071a0f82e146f4f030b230108d 353 Pfam PF11798 IMS family HHH motif 168 199 3.7E-6 T 13-09-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS05105 566127071a0f82e146f4f030b230108d 353 Hamap MF_01113 DNA polymerase IV [dinB]. 3 350 36.39 T 13-09-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS05105 566127071a0f82e146f4f030b230108d 353 SUPERFAMILY SSF56672 3 236 3.11E-94 T 13-09-2016 PMA3_RS05105 566127071a0f82e146f4f030b230108d 353 PANTHER PTHR11076:SF32 4 350 9.3E-180 T 13-09-2016 PMA3_RS05105 566127071a0f82e146f4f030b230108d 353 Gene3D G3DSA:3.30.1490.100 240 351 5.1E-30 T 13-09-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS05105 566127071a0f82e146f4f030b230108d 353 Gene3D G3DSA:3.30.70.270 68 166 1.5E-36 T 13-09-2016 PMA3_RS05105 566127071a0f82e146f4f030b230108d 353 Pfam PF00817 impB/mucB/samB family 9 156 5.3E-53 T 13-09-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 252 332 8.5E-10 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 PANTHER PTHR32060:SF11 8 624 2.4E-265 T 13-09-2016 PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 554 695 1.1E-36 T 13-09-2016 IPR020992 Tail specific protease, C-terminal PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 PANTHER PTHR32060 8 624 2.4E-265 T 13-09-2016 PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 Pfam PF03572 Peptidase family S41 376 549 3.5E-52 T 13-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 SUPERFAMILY SSF50156 258 332 1.55E-8 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 Gene3D G3DSA:3.90.226.10 352 553 2.1E-61 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 Gene3D G3DSA:3.90.226.10 673 698 2.1E-61 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 Gene3D G3DSA:3.30.750.44 212 265 1.9E-4 T 13-09-2016 PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 SMART SM00245 342 551 6.7E-57 T 13-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 214 571 8.4E-96 T 13-09-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 SMART SM00228 259 336 0.0016 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 SUPERFAMILY SSF52096 191 277 5.8E-69 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 SUPERFAMILY SSF52096 370 555 5.8E-69 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07015 41f94399b10afd79813083c82f578fbf 704 Gene3D G3DSA:2.30.42.10 266 351 1.5E-15 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS29405 eb316ea7031e29f60f87c0ac59e88328 182 SUPERFAMILY SSF47413 3 65 1.44E-15 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS29405 eb316ea7031e29f60f87c0ac59e88328 182 SMART SM00530 6 61 1.2E-13 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS29405 eb316ea7031e29f60f87c0ac59e88328 182 PANTHER PTHR10245:SF42 1 182 7.2E-99 T 13-09-2016 PMA3_RS29405 eb316ea7031e29f60f87c0ac59e88328 182 Pfam PF07883 Cupin domain 109 175 9.7E-19 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS29405 eb316ea7031e29f60f87c0ac59e88328 182 PANTHER PTHR10245 1 182 7.2E-99 T 13-09-2016 PMA3_RS29405 eb316ea7031e29f60f87c0ac59e88328 182 Gene3D G3DSA:2.60.120.10 81 182 1.6E-19 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS29405 eb316ea7031e29f60f87c0ac59e88328 182 SUPERFAMILY SSF51182 46 182 3.47E-26 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS29405 eb316ea7031e29f60f87c0ac59e88328 182 Pfam PF01381 Helix-turn-helix 7 58 2.4E-13 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS29405 eb316ea7031e29f60f87c0ac59e88328 182 Gene3D G3DSA:1.10.260.40 2 66 2.0E-22 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS17355 4782245fe601aaa4de19ee1e7f9b6c9c 409 Pfam PF00578 AhpC/TSA family 274 376 1.4E-12 T 13-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS17355 4782245fe601aaa4de19ee1e7f9b6c9c 409 Gene3D G3DSA:3.40.30.10 257 400 9.7E-46 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS17355 4782245fe601aaa4de19ee1e7f9b6c9c 409 SUPERFAMILY SSF52833 255 394 8.76E-34 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS17355 4782245fe601aaa4de19ee1e7f9b6c9c 409 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 5 169 3.2E-13 T 13-09-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PMA3_RS17355 4782245fe601aaa4de19ee1e7f9b6c9c 409 PANTHER PTHR13833 41 401 1.3E-45 T 13-09-2016 PMA3_RS17355 4782245fe601aaa4de19ee1e7f9b6c9c 409 PANTHER PTHR13833:SF51 41 401 1.3E-45 T 13-09-2016 PMA3_RS14415 cee0e127f34bf6b734fb4436f39e8213 449 PANTHER PTHR30026 27 449 3.0E-69 T 13-09-2016 PMA3_RS14415 cee0e127f34bf6b734fb4436f39e8213 449 PANTHER PTHR30026:SF3 27 449 3.0E-69 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS14415 cee0e127f34bf6b734fb4436f39e8213 449 Gene3D G3DSA:1.20.1600.10 29 437 6.5E-66 T 13-09-2016 PMA3_RS14415 cee0e127f34bf6b734fb4436f39e8213 449 SUPERFAMILY SSF56954 8 437 6.93E-74 T 13-09-2016 PMA3_RS14415 cee0e127f34bf6b734fb4436f39e8213 449 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 32 448 6.1E-84 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS14415 cee0e127f34bf6b734fb4436f39e8213 449 Pfam PF02321 Outer membrane efflux protein 36 220 7.3E-20 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS14415 cee0e127f34bf6b734fb4436f39e8213 449 Pfam PF02321 Outer membrane efflux protein 254 430 2.4E-30 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 SUPERFAMILY SSF53850 89 297 4.21E-39 T 13-09-2016 PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 PANTHER PTHR30293 1 287 1.0E-74 T 13-09-2016 PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-20 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 PANTHER PTHR30293:SF1 1 287 1.0E-74 T 13-09-2016 PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 Gene3D G3DSA:1.10.10.10 1 81 3.6E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 Gene3D G3DSA:3.40.190.10 90 176 3.8E-10 T 13-09-2016 PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 Pfam PF03466 LysR substrate binding domain 88 287 2.7E-38 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 Gene3D G3DSA:3.40.190.10 177 266 1.2E-14 T 13-09-2016 PMA3_RS13740 424a2316e2ae7cdb731bc27b61ccdf83 307 SUPERFAMILY SSF46785 1 110 1.97E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 SUPERFAMILY SSF52540 10 244 3.31E-47 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 Pfam PF12848 ABC transporter 230 305 6.3E-11 T 13-09-2016 IPR032781 ABC-transporter extension domain PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 PANTHER PTHR19211 1 554 0.0 T 13-09-2016 PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 PANTHER PTHR19211:SF7 1 554 0.0 T 13-09-2016 PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 Pfam PF00005 ABC transporter 22 191 5.4E-27 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 Pfam PF00005 ABC transporter 340 473 8.9E-22 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 SMART SM00382 348 518 3.0E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 SMART SM00382 31 236 6.6E-7 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 SUPERFAMILY SSF52540 301 518 8.35E-45 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 Gene3D G3DSA:3.40.50.300 322 540 7.6E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 Gene3D G3DSA:3.40.50.300 13 105 6.8E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 Gene3D G3DSA:3.40.50.300 141 288 6.8E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03100 6e24e7a946542fdb152d5416932d399d 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 2.9E-293 T 13-09-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD PMA3_RS17695 e1745af484de96cdc40ba5acf812f341 475 PIRSF PIRSF026673 1 475 5.8E-187 T 13-09-2016 IPR016846 Predicted ion channel, cNMP-binding PMA3_RS17695 e1745af484de96cdc40ba5acf812f341 475 Pfam PF00924 Mechanosensitive ion channel 110 307 9.0E-34 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS17695 e1745af484de96cdc40ba5acf812f341 475 SMART SM00100 329 446 7.1E-14 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS17695 e1745af484de96cdc40ba5acf812f341 475 PANTHER PTHR30566 71 231 8.0E-27 T 13-09-2016 PMA3_RS17695 e1745af484de96cdc40ba5acf812f341 475 Gene3D G3DSA:2.60.120.10 321 448 3.5E-24 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS17695 e1745af484de96cdc40ba5acf812f341 475 Gene3D G3DSA:2.30.30.60 167 215 1.2E-14 T 13-09-2016 PMA3_RS17695 e1745af484de96cdc40ba5acf812f341 475 Pfam PF00027 Cyclic nucleotide-binding domain 348 433 9.2E-13 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS17695 e1745af484de96cdc40ba5acf812f341 475 SUPERFAMILY SSF50182 152 217 1.11E-14 T 13-09-2016 IPR010920 LSM domain PMA3_RS17695 e1745af484de96cdc40ba5acf812f341 475 PANTHER PTHR30566:SF5 71 231 8.0E-27 T 13-09-2016 PMA3_RS17695 e1745af484de96cdc40ba5acf812f341 475 SUPERFAMILY SSF51206 321 446 1.83E-23 T 13-09-2016 IPR018490 Cyclic nucleotide-binding-like PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 SUPERFAMILY SSF52172 639 765 1.71E-27 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 PANTHER PTHR24423 380 627 1.8E-108 T 13-09-2016 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 PANTHER PTHR24423 5 13 1.8E-108 T 13-09-2016 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 PANTHER PTHR24423 779 920 1.8E-108 T 13-09-2016 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 SMART SM00387 509 624 6.8E-15 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 Pfam PF00512 His Kinase A (phospho-acceptor) domain 397 462 6.6E-19 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 SMART SM00388 397 462 1.7E-23 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 Gene3D G3DSA:3.40.50.2300 789 918 5.9E-41 T 13-09-2016 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 SUPERFAMILY SSF55874 451 622 6.42E-31 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 Pfam PF07695 7TM diverse intracellular signalling 171 373 2.0E-24 T 13-09-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 509 623 4.9E-15 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 SMART SM00448 791 907 3.5E-33 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 SMART SM00448 641 760 8.7E-19 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 563 4.2E-5 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 621 4.2E-5 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 602 4.2E-5 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 Pfam PF00072 Response regulator receiver domain 793 907 1.2E-22 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 Pfam PF00072 Response regulator receiver domain 643 759 4.0E-19 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 Gene3D G3DSA:3.40.50.2300 639 766 2.4E-27 T 13-09-2016 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 SUPERFAMILY SSF52172 789 911 7.68E-36 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 Gene3D G3DSA:3.30.565.10 463 626 4.6E-31 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 SUPERFAMILY SSF47384 388 463 4.71E-18 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 Gene3D G3DSA:1.10.287.130 395 458 7.1E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02525 f9a098a4bd4c163ee369dbe23052eb25 925 Pfam PF07696 7TMR-DISM extracellular 2 31 160 2.2E-18 T 13-09-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 PMA3_RS00940 e7067e3bdff9995774599f7eab15c404 428 Pfam PF03573 outer membrane porin, OprD family 28 426 8.8E-134 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS00940 e7067e3bdff9995774599f7eab15c404 428 PANTHER PTHR34596 1 428 3.2E-132 T 13-09-2016 PMA3_RS00940 e7067e3bdff9995774599f7eab15c404 428 Gene3D G3DSA:2.40.160.10 33 428 4.2E-130 T 13-09-2016 IPR023614 Porin domain PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 559 577 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 830 848 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SUPERFAMILY SSF51120 354 520 1.96E-17 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SUPERFAMILY SSF51120 1045 1194 5.49E-24 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SUPERFAMILY SSF51120 1481 1546 1.03E-9 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SUPERFAMILY SSF51120 736 932 3.19E-27 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00736 954 1053 2.0E-32 T 13-09-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00736 694 793 9.7E-43 T 13-09-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 821 839 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SUPERFAMILY SSF51120 528 673 2.09E-25 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SUPERFAMILY SSF51120 1658 1849 4.06E-26 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Gene3D G3DSA:2.150.10.10 1655 1824 5.3E-30 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Gene3D G3DSA:2.150.10.10 372 507 3.2E-14 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Gene3D G3DSA:2.150.10.10 1572 1617 5.3E-30 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Gene3D G3DSA:2.150.10.10 1055 1150 1.6E-18 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Gene3D G3DSA:2.150.10.10 784 915 1.6E-23 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Gene3D G3DSA:2.150.10.10 1488 1547 1.6E-18 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Gene3D G3DSA:2.150.10.10 531 683 5.8E-21 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00722 9 201 1.8 T 13-09-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00722 216 359 28.0 T 13-09-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 PRINTS PR00313 NodO calcium binding signature 410 421 6.5E-11 T 13-09-2016 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 PRINTS PR00313 NodO calcium binding signature 816 824 6.5E-11 T 13-09-2016 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 PRINTS PR00313 NodO calcium binding signature 563 571 6.5E-11 T 13-09-2016 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 PRINTS PR00313 NodO calcium binding signature 843 852 6.5E-11 T 13-09-2016 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SUPERFAMILY SSF51120 1541 1618 6.28E-7 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF08548 Peptidase M10 serralysin C terminal 825 930 1.8E-5 T 13-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF08548 Peptidase M10 serralysin C terminal 1074 1146 2.2E-4 T 13-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 568 586 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 536 552 7.1 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1092 1108 0.022 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1738 1755 0.0015 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 797 812 11.0 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1600 1616 3.5 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 386 397 1.1 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1508 1523 2.0 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1668 1684 0.041 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1490 1506 0.081 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 815 832 0.0032 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1074 1090 3.5 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 403 420 0.0012 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 572 588 9.9 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 833 850 0.026 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 554 570 0.015 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 421 438 0.18 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1756 1772 2.6 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1581 1597 17.0 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SUPERFAMILY SSF51126 2 366 2.47E-44 T 13-09-2016 IPR011050 Pectin lyase fold/virulence factor PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 418 436 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 550 568 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF12708 Pectate lyase superfamily protein 2 241 5.1E-30 T 13-09-2016 IPR024535 Pectate lyase superfamily protein PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Gene3D G3DSA:2.160.20.10 2 371 4.8E-44 T 13-09-2016 IPR012334 Pectin lyase fold PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 181 218 7.3E-5 T 13-09-2016 IPR022441 Parallel beta-helix repeat-2 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1744 1762 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00710 234 256 78.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00710 133 155 700.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00710 906 934 5100.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00710 280 315 6200.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00710 180 202 47.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00710 204 226 8.3 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00710 320 342 1600.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00710 257 279 0.2 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00710 348 370 2000.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SMART SM00710 157 179 1700.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Gene3D G3DSA:2.60.40.10 692 783 1.5E-31 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Gene3D G3DSA:2.60.40.10 952 1049 1.7E-28 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 PANTHER PTHR31375 2 47 2.6E-12 T 13-09-2016 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 409 427 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SUPERFAMILY SSF49313 952 1049 6.91E-24 T 13-09-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1753 1771 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 SUPERFAMILY SSF52266 1218 1463 8.42E-6 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF05345 Putative Ig domain 728 774 1.4E-12 T 13-09-2016 IPR008009 Putative Ig PMA3_RS14420 146e76bf1aa905bae896a3ce51a193cc 1871 Pfam PF05345 Putative Ig domain 988 1035 4.8E-10 T 13-09-2016 IPR008009 Putative Ig PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 SMART SM00895 96 220 2.7E-21 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 SUPERFAMILY SSF46785 9 74 1.33E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 71 1.8E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 PANTHER PTHR11751 4 74 9.1E-26 T 13-09-2016 PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 PANTHER PTHR11751 90 112 9.1E-26 T 13-09-2016 PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 Gene3D G3DSA:1.10.10.10 10 74 3.7E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 Pfam PF07729 FCD domain 96 219 1.6E-24 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 Gene3D G3DSA:1.20.120.530 93 224 2.7E-26 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 SMART SM00345 12 71 2.3E-19 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 SUPERFAMILY SSF48008 94 222 7.85E-25 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.5E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS29115 25345f4df88f8165b9874bf0f34c927a 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.5E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS03845 8103d35ae4a6e4fc54b22ed054a2d4ed 212 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.004 T 13-09-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 PMA3_RS03845 8103d35ae4a6e4fc54b22ed054a2d4ed 212 Gene3D G3DSA:3.40.50.2020 5 208 2.8E-72 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS03845 8103d35ae4a6e4fc54b22ed054a2d4ed 212 PANTHER PTHR10285 3 197 2.4E-92 T 13-09-2016 PMA3_RS03845 8103d35ae4a6e4fc54b22ed054a2d4ed 212 SUPERFAMILY SSF53271 4 206 1.97E-64 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS03845 8103d35ae4a6e4fc54b22ed054a2d4ed 212 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 208 9.1E-88 T 13-09-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 PMA3_RS03845 8103d35ae4a6e4fc54b22ed054a2d4ed 212 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 2.2E-62 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 Pfam PF02311 AraC-like ligand binding domain 23 132 2.9E-7 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 SMART SM00342 170 252 2.4E-17 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 Pfam PF12833 Helix-turn-helix domain 176 253 3.6E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 PANTHER PTHR11019:SF138 1 251 2.2E-93 T 13-09-2016 PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 SUPERFAMILY SSF46689 211 254 5.38E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 Gene3D G3DSA:1.10.10.60 172 205 8.2E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 SUPERFAMILY SSF51182 10 185 5.04E-15 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 221 236 5.8E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 252 5.8E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 Gene3D G3DSA:1.10.10.60 217 251 2.8E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 Gene3D G3DSA:2.60.120.10 13 78 1.9E-9 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 PANTHER PTHR11019 1 251 2.2E-93 T 13-09-2016 PMA3_RS24490 b3939704194b66fc19306f709d4cc0eb 255 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 205 248 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 SMART SM00878 334 440 1.3E-58 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 SUPERFAMILY SSF51246 329 445 9.94E-42 T 13-09-2016 IPR011054 Rudiment single hybrid motif PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 320 3.0E-73 T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 Gene3D G3DSA:3.30.1490.20 129 200 7.2E-26 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 2.0E-39 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 Gene3D G3DSA:3.40.50.20 2 128 1.7E-50 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 7.3E-43 T 13-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 PANTHER PTHR18866 1 468 0.0 T 13-09-2016 PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 SUPERFAMILY SSF52440 1 112 1.44E-45 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 SUPERFAMILY SSF56059 82 346 1.94E-66 T 13-09-2016 PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 Gene3D G3DSA:3.30.470.20 203 445 1.3E-95 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS29830 951d3d214fe1a8b50a78c46c23636edd 471 PANTHER PTHR18866:SF111 1 468 0.0 T 13-09-2016 PMA3_RS26850 20a20e532ae00d3b6896f38a3ee64351 79 Pfam PF04221 RelB antitoxin 1 70 5.6E-17 T 13-09-2016 IPR007337 RelB antitoxin/Antitoxin DinJ PMA3_RS26850 20a20e532ae00d3b6896f38a3ee64351 79 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 79 2.9E-16 T 13-09-2016 IPR007337 RelB antitoxin/Antitoxin DinJ PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 5.7E-64 T 13-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 4.7E-154 T 13-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 315 48.825 T 13-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 SUPERFAMILY SSF52096 5 314 7.24E-101 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 Gene3D G3DSA:3.90.226.10 60 294 3.9E-48 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 PANTHER PTHR22855 1 314 8.2E-128 T 13-09-2016 PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 2.0E-45 T 13-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 2.0E-45 T 13-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 2.0E-45 T 13-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 2.0E-45 T 13-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 2.0E-45 T 13-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 2.0E-45 T 13-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS04905 b5ce899f717876c762bdc68f0f905d95 315 PANTHER PTHR22855:SF42 1 314 8.2E-128 T 13-09-2016 PMA3_RS14490 4d76b425d319bf5b38b988e2e43f277c 436 SUPERFAMILY SSF56801 46 364 5.1E-35 T 13-09-2016 PMA3_RS14490 4d76b425d319bf5b38b988e2e43f277c 436 PANTHER PTHR36932 9 384 6.0E-38 T 13-09-2016 PMA3_RS14490 4d76b425d319bf5b38b988e2e43f277c 436 Pfam PF14535 AMP-binding enzyme C-terminal domain 343 431 9.5E-10 T 13-09-2016 IPR028154 AMP-dependent ligase, C-terminal PMA3_RS14490 4d76b425d319bf5b38b988e2e43f277c 436 Pfam PF00501 AMP-binding enzyme 77 292 4.9E-8 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS14490 4d76b425d319bf5b38b988e2e43f277c 436 Gene3D G3DSA:3.30.300.30 333 431 6.8E-19 T 13-09-2016 PMA3_RS14490 4d76b425d319bf5b38b988e2e43f277c 436 PANTHER PTHR36932:SF1 9 384 6.0E-38 T 13-09-2016 PMA3_RS14490 4d76b425d319bf5b38b988e2e43f277c 436 Gene3D G3DSA:3.40.50.980 92 249 3.2E-9 T 13-09-2016 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 SUPERFAMILY SSF52540 322 525 6.07E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 Pfam PF02881 SRP54-type protein, helical bundle domain 241 306 1.3E-11 T 13-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 Gene3D G3DSA:3.40.50.300 322 525 3.5E-83 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 255 525 1.1E-110 T 13-09-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 PANTHER PTHR11564:SF16 219 531 2.7E-145 T 13-09-2016 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 SMART SM00962 325 526 4.3E-122 T 13-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 SMART SM00382 324 524 7.3E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 Gene3D G3DSA:1.20.120.140 215 306 4.9E-32 T 13-09-2016 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 253 526 62.811 T 13-09-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 PANTHER PTHR11564 219 531 2.7E-145 T 13-09-2016 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 SUPERFAMILY SSF47364 224 302 1.7E-19 T 13-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 Pfam PF00448 SRP54-type protein, GTPase domain 325 525 5.3E-78 T 13-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 SMART SM00963 229 310 2.7E-23 T 13-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS28560 f0564de091b73f6dea05ae9b12290b21 531 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 499 512 - T 13-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS05010 b1cda01253d752e676be0483cff9c36f 371 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 86 264 2.9E-28 T 13-09-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PMA3_RS05010 b1cda01253d752e676be0483cff9c36f 371 PANTHER PTHR31223 30 306 8.4E-132 T 13-09-2016 PMA3_RS05010 b1cda01253d752e676be0483cff9c36f 371 Gene3D G3DSA:3.40.50.450 63 350 1.5E-71 T 13-09-2016 PMA3_RS05010 b1cda01253d752e676be0483cff9c36f 371 SUPERFAMILY SSF102405 75 262 1.33E-46 T 13-09-2016 PMA3_RS05010 b1cda01253d752e676be0483cff9c36f 371 PANTHER PTHR31223:SF1 30 306 8.4E-132 T 13-09-2016 PMA3_RS05010 b1cda01253d752e676be0483cff9c36f 371 Pfam PF03641 Possible lysine decarboxylase 129 262 1.4E-28 T 13-09-2016 IPR031100 LOG family PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-17 T 13-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 Pfam PF01016 Ribosomal L27 protein 2 82 2.8E-37 T 13-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 SUPERFAMILY SSF110324 2 82 2.62E-33 T 13-09-2016 PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 4.4E-39 T 13-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-09-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.0E-35 T 13-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.0E-35 T 13-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.0E-35 T 13-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 Gene3D G3DSA:2.40.50.100 20 84 6.1E-29 T 13-09-2016 PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.088 T 13-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS03180 e37d4524984ee624605eeeee1d44aca9 91 PANTHER PTHR15893 1 85 2.0E-48 T 13-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS29130 c79477dd27eac20fc35a981468c8cbeb 216 PANTHER PTHR30614 7 212 1.3E-83 T 13-09-2016 PMA3_RS29130 c79477dd27eac20fc35a981468c8cbeb 216 PANTHER PTHR30614:SF8 7 212 1.3E-83 T 13-09-2016 PMA3_RS29130 c79477dd27eac20fc35a981468c8cbeb 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 4.3E-31 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS29130 c79477dd27eac20fc35a981468c8cbeb 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 212 2.2E-15 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29130 c79477dd27eac20fc35a981468c8cbeb 216 SUPERFAMILY SSF161098 13 198 1.7E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29130 c79477dd27eac20fc35a981468c8cbeb 216 Gene3D G3DSA:1.10.3720.10 11 213 2.4E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17635 e661ff4224723bda893a7330e796ac11 183 SUPERFAMILY SSF52172 4 124 1.85E-31 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS17635 e661ff4224723bda893a7330e796ac11 183 SMART SM00448 3 113 9.0E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS17635 e661ff4224723bda893a7330e796ac11 183 PANTHER PTHR26402:SF511 3 113 3.6E-27 T 13-09-2016 PMA3_RS17635 e661ff4224723bda893a7330e796ac11 183 Gene3D G3DSA:3.40.50.2300 4 125 4.4E-28 T 13-09-2016 PMA3_RS17635 e661ff4224723bda893a7330e796ac11 183 PANTHER PTHR26402 3 113 3.6E-27 T 13-09-2016 PMA3_RS17635 e661ff4224723bda893a7330e796ac11 183 Pfam PF00072 Response regulator receiver domain 5 113 1.6E-21 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS00055 2de1ea4e25cb73d826ef780c10edca55 224 SUPERFAMILY SSF161098 15 211 1.83E-40 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00055 2de1ea4e25cb73d826ef780c10edca55 224 PANTHER PTHR30450:SF1 1 224 2.3E-122 T 13-09-2016 PMA3_RS00055 2de1ea4e25cb73d826ef780c10edca55 224 Gene3D G3DSA:1.10.3720.10 15 219 1.5E-36 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00055 2de1ea4e25cb73d826ef780c10edca55 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 222 3.2E-17 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00055 2de1ea4e25cb73d826ef780c10edca55 224 PANTHER PTHR30450 1 224 2.3E-122 T 13-09-2016 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 Gene3D G3DSA:3.40.50.80 588 726 2.1E-31 T 13-09-2016 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 Pfam PF00258 Flavodoxin 337 458 1.5E-12 T 13-09-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 Gene3D G3DSA:2.40.30.10 500 577 8.6E-12 T 13-09-2016 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 PANTHER PTHR19384:SF76 537 726 9.0E-48 T 13-09-2016 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 Gene3D G3DSA:3.40.50.360 328 477 3.3E-27 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 SUPERFAMILY SSF52218 332 482 5.03E-34 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 Pfam PF03929 PepSY-associated TM region 4 317 4.6E-38 T 13-09-2016 IPR005625 PepSY-associated TM protein PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 SUPERFAMILY SSF52343 588 726 1.44E-31 T 13-09-2016 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 Pfam PF00175 Oxidoreductase NAD-binding domain 597 697 1.7E-13 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 PANTHER PTHR19384 537 726 9.0E-48 T 13-09-2016 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 SUPERFAMILY SSF63380 480 588 1.63E-19 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 Pfam PF00970 Oxidoreductase FAD-binding domain 501 577 3.6E-5 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 538 545 3.8E-11 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 631 642 3.8E-11 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 684 692 3.8E-11 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 596 615 3.8E-11 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS13560 578b8eecb50c7435260af0bbdfd008e9 726 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 521 531 3.8E-11 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS08160 d68d1cda230acacdff25339e5fe7678e 90 SUPERFAMILY SSF47729 1 90 9.42E-31 T 13-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PMA3_RS08160 d68d1cda230acacdff25339e5fe7678e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.6E-17 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS08160 d68d1cda230acacdff25339e5fe7678e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.6E-17 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS08160 d68d1cda230acacdff25339e5fe7678e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.6E-17 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS08160 d68d1cda230acacdff25339e5fe7678e 90 SMART SM00411 1 90 1.8E-40 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS08160 d68d1cda230acacdff25339e5fe7678e 90 PANTHER PTHR33175 1 90 3.8E-41 T 13-09-2016 PMA3_RS08160 d68d1cda230acacdff25339e5fe7678e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-31 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS08160 d68d1cda230acacdff25339e5fe7678e 90 Gene3D G3DSA:4.10.520.10 1 90 4.7E-35 T 13-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PMA3_RS08160 d68d1cda230acacdff25339e5fe7678e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PMA3_RS14025 c25dc07afde05dde9571205a07033ab6 183 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 29 144 4.8E-19 T 13-09-2016 PMA3_RS14025 c25dc07afde05dde9571205a07033ab6 183 SUPERFAMILY SSF54593 29 166 4.77E-13 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS14025 c25dc07afde05dde9571205a07033ab6 183 Gene3D G3DSA:3.10.180.10 31 156 1.4E-14 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS27010 a251c7ce2ded0759c5077d2085b1580b 232 Gene3D G3DSA:2.40.160.20 24 232 1.1E-65 T 13-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PMA3_RS27010 a251c7ce2ded0759c5077d2085b1580b 232 PANTHER PTHR36920 1 232 1.8E-60 T 13-09-2016 PMA3_RS27010 a251c7ce2ded0759c5077d2085b1580b 232 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 224 232 - T 13-09-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 PMA3_RS27010 a251c7ce2ded0759c5077d2085b1580b 232 SUPERFAMILY SSF56925 24 232 6.02E-31 T 13-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PMA3_RS27010 a251c7ce2ded0759c5077d2085b1580b 232 Pfam PF03922 OmpW family 25 232 2.7E-57 T 13-09-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 PMA3_RS27010 a251c7ce2ded0759c5077d2085b1580b 232 PANTHER PTHR36920:SF1 1 232 1.8E-60 T 13-09-2016 PMA3_RS13875 61e12614edea33abdda6ceffc41ec473 476 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 472 232.162 T 13-09-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 PMA3_RS13875 61e12614edea33abdda6ceffc41ec473 476 PANTHER PTHR32328:SF0 2 459 4.4E-205 T 13-09-2016 PMA3_RS13875 61e12614edea33abdda6ceffc41ec473 476 SUPERFAMILY SSF53383 79 348 7.23E-42 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS13875 61e12614edea33abdda6ceffc41ec473 476 Pfam PF12390 Selenocysteine synthase N terminal 11 48 3.7E-9 T 13-09-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 PMA3_RS13875 61e12614edea33abdda6ceffc41ec473 476 Pfam PF03841 L-seryl-tRNA selenium transferase 85 456 1.1E-166 T 13-09-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 PMA3_RS13875 61e12614edea33abdda6ceffc41ec473 476 Gene3D G3DSA:3.40.640.10 89 321 1.4E-30 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS13875 61e12614edea33abdda6ceffc41ec473 476 PANTHER PTHR32328 2 459 4.4E-205 T 13-09-2016 PMA3_RS13875 61e12614edea33abdda6ceffc41ec473 476 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 11 461 2.5E-177 T 13-09-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 Pfam PF08494 DEAD/H associated 636 838 1.1E-54 T 13-09-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 Gene3D G3DSA:3.40.50.300 19 214 4.3E-39 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 PANTHER PTHR24031 1357 1366 2.6E-68 T 13-09-2016 PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 PANTHER PTHR24031:SF336 18 389 2.6E-68 T 13-09-2016 PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 SMART SM00487 25 248 3.8E-29 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 Gene3D G3DSA:3.40.50.300 259 397 8.4E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 SUPERFAMILY SSF52540 38 382 1.29E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 PANTHER PTHR24031 18 389 2.6E-68 T 13-09-2016 PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 Pfam PF00271 Helicase conserved C-terminal domain 267 371 2.0E-16 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 PANTHER PTHR24031:SF336 1357 1366 2.6E-68 T 13-09-2016 PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 Gene3D G3DSA:1.10.10.10 994 1037 4.1E-5 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 SMART SM00490 291 371 7.5E-17 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 Pfam PF00270 DEAD/DEAH box helicase 30 216 1.3E-26 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS27025 2a36c1ecae62203e52e9cd68ab859692 1438 SUPERFAMILY SSF46785 986 1031 7.0E-5 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12555 e2d2e6b380e6e3e6e5eb9b167ba61e87 438 PANTHER PTHR11662:SF3 19 431 8.3E-131 T 13-09-2016 PMA3_RS12555 e2d2e6b380e6e3e6e5eb9b167ba61e87 438 Pfam PF07690 Major Facilitator Superfamily 33 395 1.2E-42 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS12555 e2d2e6b380e6e3e6e5eb9b167ba61e87 438 Gene3D G3DSA:1.20.1250.20 23 225 1.9E-44 T 13-09-2016 PMA3_RS12555 e2d2e6b380e6e3e6e5eb9b167ba61e87 438 Gene3D G3DSA:1.20.1250.20 250 429 2.4E-13 T 13-09-2016 PMA3_RS12555 e2d2e6b380e6e3e6e5eb9b167ba61e87 438 SUPERFAMILY SSF103473 19 433 3.53E-81 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS12555 e2d2e6b380e6e3e6e5eb9b167ba61e87 438 PANTHER PTHR11662 19 431 8.3E-131 T 13-09-2016 PMA3_RS18280 77b2164c95d74b75ee795dbf9f1f6162 246 PANTHER PTHR12124 34 236 4.2E-20 T 13-09-2016 PMA3_RS18280 77b2164c95d74b75ee795dbf9f1f6162 246 Pfam PF01927 Mut7-C RNAse domain 97 238 1.8E-45 T 13-09-2016 IPR002782 Mut7-C RNAse domain PMA3_RS18280 77b2164c95d74b75ee795dbf9f1f6162 246 Gene3D G3DSA:3.10.20.30 26 75 6.9E-8 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS18280 77b2164c95d74b75ee795dbf9f1f6162 246 Pfam PF14451 Mut7-C ubiquitin 1 81 1.2E-34 T 13-09-2016 IPR027798 Ubiquitin Mut7-C domain PMA3_RS18280 77b2164c95d74b75ee795dbf9f1f6162 246 SUPERFAMILY SSF54285 22 75 1.38E-6 T 13-09-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PMA3_RS18280 77b2164c95d74b75ee795dbf9f1f6162 246 PANTHER PTHR12124:SF44 34 236 4.2E-20 T 13-09-2016 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 SUPERFAMILY SSF55681 2 253 2.73E-106 T 13-09-2016 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 PANTHER PTHR11777 1 874 0.0 T 13-09-2016 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 Pfam PF02272 DHHA1 domain 799 865 5.7E-15 T 13-09-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 PANTHER PTHR11777:SF9 1 874 0.0 T 13-09-2016 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 13-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 695 3.9E-16 T 13-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 SUPERFAMILY SSF50447 453 550 1.55E-17 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 203.28 T 13-09-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 Pfam PF01411 tRNA synthetases class II (A) 5 553 2.6E-224 T 13-09-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 Gene3D G3DSA:3.30.930.10 1 249 1.1E-124 T 13-09-2016 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 SUPERFAMILY SSF101353 254 462 4.84E-62 T 13-09-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 8.5E-31 T 13-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 8.5E-31 T 13-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 8.5E-31 T 13-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 8.5E-31 T 13-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 8.5E-31 T 13-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 SUPERFAMILY SSF55186 550 708 1.57E-50 T 13-09-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PMA3_RS05670 79c4f2b5aa8463b1a38a018f7c62877a 874 SMART SM00863 651 695 2.0E-19 T 13-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PMA3_RS13990 55b3f3632c0ef4f9000a3306e6db2c1f 154 SUPERFAMILY SSF54637 8 150 4.98E-29 T 13-09-2016 IPR029069 HotDog domain PMA3_RS13990 55b3f3632c0ef4f9000a3306e6db2c1f 154 PANTHER PTHR13078 9 147 4.8E-27 T 13-09-2016 PMA3_RS13990 55b3f3632c0ef4f9000a3306e6db2c1f 154 Pfam PF01575 MaoC like domain 16 115 3.4E-11 T 13-09-2016 IPR002539 MaoC-like domain PMA3_RS13990 55b3f3632c0ef4f9000a3306e6db2c1f 154 Gene3D G3DSA:3.10.129.10 4 148 1.4E-34 T 13-09-2016 IPR029069 HotDog domain PMA3_RS20325 1b9ba5e6c10c01c08479936c85fa20d4 282 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 5 270 5.7E-76 T 13-09-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 PMA3_RS20325 1b9ba5e6c10c01c08479936c85fa20d4 282 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 272 25.056 T 13-09-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 PMA3_RS20325 1b9ba5e6c10c01c08479936c85fa20d4 282 PANTHER PTHR38685 1 282 3.1E-74 T 13-09-2016 PMA3_RS20325 1b9ba5e6c10c01c08479936c85fa20d4 282 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 143 272 3.0E-71 T 13-09-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PMA3_RS20325 1b9ba5e6c10c01c08479936c85fa20d4 282 SMART SM00771 140 270 4.7E-67 T 13-09-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PMA3_RS20325 1b9ba5e6c10c01c08479936c85fa20d4 282 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 142 269 5.2E-48 T 13-09-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PMA3_RS20325 1b9ba5e6c10c01c08479936c85fa20d4 282 SUPERFAMILY SSF64383 140 276 1.06E-46 T 13-09-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PMA3_RS20325 1b9ba5e6c10c01c08479936c85fa20d4 282 Gene3D G3DSA:3.30.1400.10 139 276 1.3E-57 T 13-09-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PMA3_RS20325 1b9ba5e6c10c01c08479936c85fa20d4 282 PANTHER PTHR38685:SF1 1 282 3.1E-74 T 13-09-2016 PMA3_RS19765 8bdf6c7de071a6b7c786ed731fdd09c8 189 Pfam PF09722 Protein of unknown function (DUF2384) 138 187 1.6E-12 T 13-09-2016 IPR024467 Domain of unknown function DUF2384 PMA3_RS19765 8bdf6c7de071a6b7c786ed731fdd09c8 189 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 65 189 7.8E-27 T 13-09-2016 IPR011979 Conserved hypothetical protein CHP02293 PMA3_RS20595 26765eafd7deb3893afb5195f5d4d3ce 445 Pfam PF00144 Beta-lactamase 135 420 1.3E-38 T 13-09-2016 IPR001466 Beta-lactamase-related PMA3_RS20595 26765eafd7deb3893afb5195f5d4d3ce 445 SUPERFAMILY SSF56601 66 441 4.22E-92 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS20595 26765eafd7deb3893afb5195f5d4d3ce 445 Gene3D G3DSA:3.40.710.10 133 418 3.6E-52 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS20595 26765eafd7deb3893afb5195f5d4d3ce 445 PANTHER PTHR22935:SF2 124 441 1.2E-103 T 13-09-2016 PMA3_RS20595 26765eafd7deb3893afb5195f5d4d3ce 445 PANTHER PTHR22935 124 441 1.2E-103 T 13-09-2016 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 1.9E-60 T 13-09-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 SUPERFAMILY SSF55347 134 355 3.09E-76 T 13-09-2016 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 3.8E-195 T 13-09-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 PIRSF PIRSF000148 1 370 6.3E-65 T 13-09-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 PANTHER PTHR10174:SF116 201 370 8.0E-154 T 13-09-2016 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 PANTHER PTHR10174:SF116 103 179 8.0E-154 T 13-09-2016 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 Gene3D G3DSA:3.40.50.720 1 142 3.7E-63 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.242 T 13-09-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 13-09-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 PANTHER PTHR10174 201 370 8.0E-154 T 13-09-2016 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 PANTHER PTHR10174 103 179 8.0E-154 T 13-09-2016 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 Gene3D G3DSA:3.30.360.10 143 351 6.9E-74 T 13-09-2016 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 SUPERFAMILY SSF51735 1 147 1.66E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 SMART SM00859 3 122 2.3E-26 T 13-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PMA3_RS09035 3007fc49a281af75b9d5618e248d5106 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 3.1E-24 T 13-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PMA3_RS18825 5c23bdad54317f84a8002ed8445fa6f8 278 SUPERFAMILY SSF52540 22 242 3.84E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18825 5c23bdad54317f84a8002ed8445fa6f8 278 PANTHER PTHR24220:SF589 23 248 1.1E-93 T 13-09-2016 PMA3_RS18825 5c23bdad54317f84a8002ed8445fa6f8 278 Pfam PF00005 ABC transporter 44 182 2.6E-28 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS18825 5c23bdad54317f84a8002ed8445fa6f8 278 SMART SM00382 52 233 3.9E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS18825 5c23bdad54317f84a8002ed8445fa6f8 278 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS18825 5c23bdad54317f84a8002ed8445fa6f8 278 PANTHER PTHR24220 23 248 1.1E-93 T 13-09-2016 PMA3_RS18825 5c23bdad54317f84a8002ed8445fa6f8 278 Gene3D G3DSA:3.40.50.300 13 242 6.5E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25315 c1732581735222fc5995a5907a0a5e07 336 SUPERFAMILY SSF161098 197 319 6.05E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25315 c1732581735222fc5995a5907a0a5e07 336 SUPERFAMILY SSF161098 92 160 6.05E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25315 c1732581735222fc5995a5907a0a5e07 336 Gene3D G3DSA:1.10.3720.10 89 163 4.3E-21 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25315 c1732581735222fc5995a5907a0a5e07 336 Gene3D G3DSA:1.10.3720.10 200 325 4.3E-21 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25315 c1732581735222fc5995a5907a0a5e07 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 6.0E-46 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25315 c1732581735222fc5995a5907a0a5e07 336 PANTHER PTHR30465:SF0 191 334 2.7E-144 T 13-09-2016 PMA3_RS25315 c1732581735222fc5995a5907a0a5e07 336 PANTHER PTHR30465:SF0 1 169 2.7E-144 T 13-09-2016 PMA3_RS25315 c1732581735222fc5995a5907a0a5e07 336 PANTHER PTHR30465 191 334 2.7E-144 T 13-09-2016 PMA3_RS25315 c1732581735222fc5995a5907a0a5e07 336 PANTHER PTHR30465 1 169 2.7E-144 T 13-09-2016 PMA3_RS04975 3ecd9fd298dc65fd3ba2ade2370770e2 285 Pfam PF01551 Peptidase family M23 185 278 2.0E-31 T 13-09-2016 IPR016047 Peptidase M23 PMA3_RS04975 3ecd9fd298dc65fd3ba2ade2370770e2 285 SUPERFAMILY SSF51261 59 282 1.26E-52 T 13-09-2016 IPR011055 Duplicated hybrid motif PMA3_RS04975 3ecd9fd298dc65fd3ba2ade2370770e2 285 Gene3D G3DSA:2.70.70.10 151 283 2.4E-39 T 13-09-2016 PMA3_RS04975 3ecd9fd298dc65fd3ba2ade2370770e2 285 SMART SM00257 58 102 2.0E-9 T 13-09-2016 IPR018392 LysM domain PMA3_RS04975 3ecd9fd298dc65fd3ba2ade2370770e2 285 Gene3D G3DSA:3.10.350.10 58 100 3.2E-13 T 13-09-2016 IPR018392 LysM domain PMA3_RS04975 3ecd9fd298dc65fd3ba2ade2370770e2 285 PANTHER PTHR21666 141 285 7.4E-43 T 13-09-2016 PMA3_RS04975 3ecd9fd298dc65fd3ba2ade2370770e2 285 Pfam PF01476 LysM domain 59 100 2.8E-10 T 13-09-2016 IPR018392 LysM domain PMA3_RS15845 d26b700d8716fc6b7d0bdd2062ba3a87 358 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 255 268 - T 13-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PMA3_RS15845 d26b700d8716fc6b7d0bdd2062ba3a87 358 Pfam PF00294 pfkB family carbohydrate kinase 5 303 6.3E-62 T 13-09-2016 IPR011611 Carbohydrate kinase PfkB PMA3_RS15845 d26b700d8716fc6b7d0bdd2062ba3a87 358 PANTHER PTHR10584:SF186 1 335 6.9E-115 T 13-09-2016 PMA3_RS15845 d26b700d8716fc6b7d0bdd2062ba3a87 358 SUPERFAMILY SSF53613 1 306 5.46E-80 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS15845 d26b700d8716fc6b7d0bdd2062ba3a87 358 Gene3D G3DSA:3.40.1190.20 1 310 1.1E-86 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS15845 d26b700d8716fc6b7d0bdd2062ba3a87 358 PANTHER PTHR10584 1 335 6.9E-115 T 13-09-2016 PMA3_RS12740 cf1da1a3899a20ab5a68c22a44b32557 182 PANTHER PTHR10245 1 182 1.1E-71 T 13-09-2016 PMA3_RS12740 cf1da1a3899a20ab5a68c22a44b32557 182 Gene3D G3DSA:1.10.260.40 1 67 8.2E-21 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS12740 cf1da1a3899a20ab5a68c22a44b32557 182 Pfam PF01381 Helix-turn-helix 7 60 1.1E-11 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS12740 cf1da1a3899a20ab5a68c22a44b32557 182 Gene3D G3DSA:2.60.120.10 68 182 2.5E-20 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS12740 cf1da1a3899a20ab5a68c22a44b32557 182 Pfam PF07883 Cupin domain 107 175 5.2E-17 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS12740 cf1da1a3899a20ab5a68c22a44b32557 182 SUPERFAMILY SSF47413 2 68 1.58E-15 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS12740 cf1da1a3899a20ab5a68c22a44b32557 182 SMART SM00530 6 61 1.6E-12 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS12740 cf1da1a3899a20ab5a68c22a44b32557 182 PANTHER PTHR10245:SF42 1 182 1.1E-71 T 13-09-2016 PMA3_RS12740 cf1da1a3899a20ab5a68c22a44b32557 182 SUPERFAMILY SSF51182 46 182 2.01E-30 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS17510 b6cb7e47e06499c8be7b12989d038b2f 268 Gene3D G3DSA:3.40.50.150 41 242 3.9E-24 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS17510 b6cb7e47e06499c8be7b12989d038b2f 268 SUPERFAMILY SSF53335 28 244 4.65E-29 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS17510 b6cb7e47e06499c8be7b12989d038b2f 268 PANTHER PTHR10108:SF868 58 250 1.2E-19 T 13-09-2016 PMA3_RS17510 b6cb7e47e06499c8be7b12989d038b2f 268 Pfam PF13649 Methyltransferase domain 63 158 2.1E-14 T 13-09-2016 PMA3_RS17510 b6cb7e47e06499c8be7b12989d038b2f 268 PANTHER PTHR10108 58 250 1.2E-19 T 13-09-2016 PMA3_RS10870 b84058d932b58d9623f11988d9ffc199 92 PANTHER PTHR34702 1 92 1.5E-15 T 13-09-2016 PMA3_RS10870 b84058d932b58d9623f11988d9ffc199 92 PANTHER PTHR34702:SF1 1 92 1.5E-15 T 13-09-2016 PMA3_RS10870 b84058d932b58d9623f11988d9ffc199 92 PIRSF PIRSF028784 1 92 2.9E-26 T 13-09-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PMA3_RS10870 b84058d932b58d9623f11988d9ffc199 92 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 1.5E-17 T 13-09-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PMA3_RS00925 427811c5d53ff9a7ab40674f837edbaf 292 Gene3D G3DSA:3.60.110.10 3 282 4.7E-92 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS00925 427811c5d53ff9a7ab40674f837edbaf 292 SUPERFAMILY SSF56317 3 282 1.44E-80 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS00925 427811c5d53ff9a7ab40674f837edbaf 292 PANTHER PTHR23088 3 286 2.8E-153 T 13-09-2016 PMA3_RS00925 427811c5d53ff9a7ab40674f837edbaf 292 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 1.4E-147 T 13-09-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 PMA3_RS00925 427811c5d53ff9a7ab40674f837edbaf 292 PANTHER PTHR23088:SF26 3 286 2.8E-153 T 13-09-2016 PMA3_RS00925 427811c5d53ff9a7ab40674f837edbaf 292 Pfam PF00795 Carbon-nitrogen hydrolase 6 266 1.8E-51 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 SUPERFAMILY SSF47203 229 378 2.58E-51 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 Gene3D G3DSA:1.10.540.10 6 120 3.6E-36 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 1.0E-26 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 Gene3D G3DSA:1.20.140.10 220 378 1.3E-61 T 13-09-2016 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 2.8E-35 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 SUPERFAMILY SSF56645 5 242 4.58E-90 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 PANTHER PTHR10909 1 378 9.4E-245 T 13-09-2016 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 PANTHER PTHR10909:SF190 1 378 9.4E-245 T 13-09-2016 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 4.8E-45 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS04025 03e7675df937bd2b5597820c8339e0b2 378 Gene3D G3DSA:2.40.110.10 123 219 8.9E-42 T 13-09-2016 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 PANTHER PTHR30560 1 429 8.7E-129 T 13-09-2016 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 TIGRFAM TIGR00115 tig: trigger factor 11 410 1.9E-137 T 13-09-2016 IPR005215 Trigger factor GO:0015031 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 SUPERFAMILY SSF102735 1 129 1.7E-38 T 13-09-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 8.7E-40 T 13-09-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 Gene3D G3DSA:3.10.50.40 156 213 9.8E-10 T 13-09-2016 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 411 1.9E-36 T 13-09-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 PIRSF PIRSF003095 1 432 1.7E-122 T 13-09-2016 IPR005215 Trigger factor GO:0015031 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 236 1.1E-13 T 13-09-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 Hamap MF_00303 Trigger factor [tig]. 1 417 21.299 T 13-09-2016 IPR005215 Trigger factor GO:0015031 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 SUPERFAMILY SSF109998 248 429 5.89E-48 T 13-09-2016 IPR027304 Trigger factor/SurA domain PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 SUPERFAMILY SSF54534 89 240 5.7E-33 T 13-09-2016 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 PANTHER PTHR30560:SF3 1 429 8.7E-129 T 13-09-2016 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 Gene3D G3DSA:1.10.3120.10 214 388 6.7E-61 T 13-09-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PMA3_RS08140 4b4d5fc6e6f1ae7bd0e57713414d0163 436 Gene3D G3DSA:3.30.70.1050 1 117 9.7E-39 T 13-09-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PMA3_RS12430 0d727e3c3f148c41828b4c3914769304 186 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 1.2E-18 T 13-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PMA3_RS12430 0d727e3c3f148c41828b4c3914769304 186 PANTHER PTHR14269:SF13 1 179 6.7E-91 T 13-09-2016 PMA3_RS12430 0d727e3c3f148c41828b4c3914769304 186 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 181 1.5E-57 T 13-09-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 PMA3_RS12430 0d727e3c3f148c41828b4c3914769304 186 PIRSF PIRSF000847 1 186 1.7E-51 T 13-09-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 PMA3_RS12430 0d727e3c3f148c41828b4c3914769304 186 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 13-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PMA3_RS12430 0d727e3c3f148c41828b4c3914769304 186 PANTHER PTHR14269 1 179 6.7E-91 T 13-09-2016 PMA3_RS21940 baba515be6df0439c1d6fbca6078ab2c 342 PANTHER PTHR11019 153 327 2.9E-32 T 13-09-2016 PMA3_RS21940 baba515be6df0439c1d6fbca6078ab2c 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 303 6.1E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS21940 baba515be6df0439c1d6fbca6078ab2c 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 319 6.1E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS21940 baba515be6df0439c1d6fbca6078ab2c 342 SMART SM00342 237 319 1.4E-27 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS21940 baba515be6df0439c1d6fbca6078ab2c 342 PANTHER PTHR11019:SF52 153 327 2.9E-32 T 13-09-2016 PMA3_RS21940 baba515be6df0439c1d6fbca6078ab2c 342 SUPERFAMILY SSF46689 273 322 1.39E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21940 baba515be6df0439c1d6fbca6078ab2c 342 Pfam PF12833 Helix-turn-helix domain 244 320 1.3E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS21940 baba515be6df0439c1d6fbca6078ab2c 342 Gene3D G3DSA:1.10.10.60 273 321 9.6E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21940 baba515be6df0439c1d6fbca6078ab2c 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 11 194 2.9E-49 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 SUPERFAMILY SSF55785 52 157 1.01E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 PANTHER PTHR24423:SF438 44 311 4.3E-161 T 13-09-2016 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 444 563 1.1E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 SMART SM00448 584 697 1.1E-14 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 Gene3D G3DSA:3.30.450.20 171 293 4.9E-21 T 13-09-2016 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 SMART SM00388 336 402 8.5E-5 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 SMART SM00387 443 565 1.6E-25 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 190 303 1.0E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 Gene3D G3DSA:3.30.565.10 399 563 4.7E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 PANTHER PTHR24423 332 703 4.3E-161 T 13-09-2016 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 PANTHER PTHR24423:SF438 332 703 4.3E-161 T 13-09-2016 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 SUPERFAMILY SSF47384 327 399 2.55E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 SUPERFAMILY SSF55785 190 298 2.62E-21 T 13-09-2016 IPR000014 PAS domain PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 PANTHER PTHR24423 44 311 4.3E-161 T 13-09-2016 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 Gene3D G3DSA:3.40.50.2300 583 702 1.5E-26 T 13-09-2016 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 SMART SM00086 115 158 28.0 T 13-09-2016 IPR001610 PAC motif PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 SMART SM00086 254 296 0.0086 T 13-09-2016 IPR001610 PAC motif PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 SUPERFAMILY SSF52172 583 702 1.71E-23 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 Pfam PF08447 PAS fold 204 289 8.1E-15 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 Pfam PF00072 Response regulator receiver domain 586 697 1.7E-13 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 SUPERFAMILY SSF55874 392 565 6.81E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 Gene3D G3DSA:3.30.450.20 50 170 4.7E-9 T 13-09-2016 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 562 2.1E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 522 2.1E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 508 2.1E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12115 21ef1d1e8cfd786b6543341558ce030d 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 543 2.1E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 Gene3D G3DSA:3.90.1170.50 185 289 8.6E-21 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 PIRSF PIRSF036389 1 722 5.8E-262 T 13-09-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 PANTHER PTHR11908 49 713 1.8E-236 T 13-09-2016 PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 SUPERFAMILY SSF56003 315 718 1.31E-118 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 32 4.6E-5 T 13-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 Gene3D G3DSA:3.30.365.10 48 178 3.3E-36 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 SMART SM01008 213 291 3.9E-22 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 316 552 2.3E-31 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 36 195 2.7E-15 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 593 672 1.4E-13 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 SUPERFAMILY SSF56003 15 245 2.55E-44 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 Gene3D G3DSA:3.30.365.10 387 551 8.3E-34 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 PANTHER PTHR11908:SF79 49 713 1.8E-236 T 13-09-2016 PMA3_RS15450 1d228e26803181e1b024c098923e7294 722 Gene3D G3DSA:3.30.365.10 552 719 7.4E-42 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 PANTHER PTHR13734 1 291 3.1E-72 T 13-09-2016 PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 PIRSF PIRSF000813 1 408 2.6E-197 T 13-09-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 SUPERFAMILY SSF81891 120 401 1.7E-52 T 13-09-2016 PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 41.927 T 13-09-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 2.5E-14 T 13-09-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 Pfam PF01743 Poly A polymerase head domain 4 122 5.7E-17 T 13-09-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 SUPERFAMILY SSF81301 1 119 3.81E-28 T 13-09-2016 PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 Gene3D G3DSA:1.10.3090.10 122 361 1.3E-52 T 13-09-2016 PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 55.26 T 13-09-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 SMART SM00471 224 356 0.0094 T 13-09-2016 IPR003607 HD/PDEase domain PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 Pfam PF01966 HD domain 231 310 4.3E-10 T 13-09-2016 IPR006674 HD domain PMA3_RS27600 a0bff8076e7f6360051e3903168a712c 409 Gene3D G3DSA:3.30.460.10 1 121 8.9E-29 T 13-09-2016 PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 Gene3D G3DSA:1.20.1560.10 15 316 5.7E-45 T 13-09-2016 PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 Gene3D G3DSA:3.40.50.300 340 555 1.5E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 PANTHER PTHR24222 9 555 4.4E-249 T 13-09-2016 PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 Pfam PF00664 ABC transporter transmembrane region 23 281 7.4E-14 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 PANTHER PTHR24222:SF0 9 555 4.4E-249 T 13-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 17 557 3.9E-223 T 13-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 SMART SM00382 357 543 5.6E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 SUPERFAMILY SSF90123 15 323 9.94E-47 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 SUPERFAMILY SSF52540 322 555 8.0E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09880 e4c18d5b1da8f17f12d83ffb82053073 573 Pfam PF00005 ABC transporter 349 495 7.1E-26 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS28310 76b00c7568a70a49e8f04940476fa72a 468 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 447 50.116 T 13-09-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 PMA3_RS28310 76b00c7568a70a49e8f04940476fa72a 468 PANTHER PTHR11986 5 452 5.5E-219 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS28310 76b00c7568a70a49e8f04940476fa72a 468 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS28310 76b00c7568a70a49e8f04940476fa72a 468 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 442 6.9E-178 T 13-09-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 PMA3_RS28310 76b00c7568a70a49e8f04940476fa72a 468 Gene3D G3DSA:3.90.1150.10 344 445 2.2E-56 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS28310 76b00c7568a70a49e8f04940476fa72a 468 Gene3D G3DSA:3.90.1150.10 5 65 2.2E-56 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS28310 76b00c7568a70a49e8f04940476fa72a 468 SUPERFAMILY SSF53383 10 442 1.62E-133 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS28310 76b00c7568a70a49e8f04940476fa72a 468 Gene3D G3DSA:3.40.640.10 66 342 1.0E-93 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS28310 76b00c7568a70a49e8f04940476fa72a 468 PANTHER PTHR11986:SF8 5 452 5.5E-219 T 13-09-2016 PMA3_RS28310 76b00c7568a70a49e8f04940476fa72a 468 Pfam PF00202 Aminotransferase class-III 25 439 1.3E-128 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS11745 7076de3a004d246898b4edb80112e56f 263 PANTHER PTHR30143 1 262 1.6E-73 T 13-09-2016 PMA3_RS11745 7076de3a004d246898b4edb80112e56f 263 SUPERFAMILY SSF56529 1 262 3.21E-72 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS11745 7076de3a004d246898b4edb80112e56f 263 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 71 258 4.3E-10 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS11745 7076de3a004d246898b4edb80112e56f 263 Gene3D G3DSA:3.90.850.10 2 262 3.6E-79 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS16355 7c417f8ac76c747830a17017442f277f 392 PANTHER PTHR11228 26 252 1.3E-76 T 13-09-2016 PMA3_RS16355 7c417f8ac76c747830a17017442f277f 392 Pfam PF04055 Radical SAM superfamily 35 183 5.3E-22 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS16355 7c417f8ac76c747830a17017442f277f 392 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 29 380 9.9E-175 T 13-09-2016 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ PMA3_RS16355 7c417f8ac76c747830a17017442f277f 392 Gene3D G3DSA:3.20.20.70 27 362 3.3E-70 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS16355 7c417f8ac76c747830a17017442f277f 392 PANTHER PTHR11228:SF7 274 382 1.3E-76 T 13-09-2016 PMA3_RS16355 7c417f8ac76c747830a17017442f277f 392 PANTHER PTHR11228 274 382 1.3E-76 T 13-09-2016 PMA3_RS16355 7c417f8ac76c747830a17017442f277f 392 PANTHER PTHR11228:SF7 26 252 1.3E-76 T 13-09-2016 PMA3_RS16355 7c417f8ac76c747830a17017442f277f 392 SUPERFAMILY SSF102114 27 353 4.05E-65 T 13-09-2016 PMA3_RS16355 7c417f8ac76c747830a17017442f277f 392 PIRSF PIRSF037420 16 387 1.5E-132 T 13-09-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 PMA3_RS16355 7c417f8ac76c747830a17017442f277f 392 Pfam PF13353 4Fe-4S single cluster domain 31 143 3.0E-10 T 13-09-2016 PMA3_RS08465 7950820323c2b2a12649e5b770b527e9 363 PANTHER PTHR12526 128 356 1.6E-39 T 13-09-2016 PMA3_RS08465 7950820323c2b2a12649e5b770b527e9 363 SUPERFAMILY SSF53756 69 358 7.22E-48 T 13-09-2016 PMA3_RS08465 7950820323c2b2a12649e5b770b527e9 363 Pfam PF00534 Glycosyl transferases group 1 185 326 5.8E-25 T 13-09-2016 IPR001296 Glycosyl transferase, family 1 PMA3_RS08465 7950820323c2b2a12649e5b770b527e9 363 Gene3D G3DSA:3.40.50.2000 192 323 1.3E-17 T 13-09-2016 PMA3_RS09565 62870cc6a77bf7e3209cc79ea948e5ce 338 PANTHER PTHR30465:SF0 194 337 7.8E-111 T 13-09-2016 PMA3_RS09565 62870cc6a77bf7e3209cc79ea948e5ce 338 SUPERFAMILY SSF161098 200 321 3.76E-15 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09565 62870cc6a77bf7e3209cc79ea948e5ce 338 SUPERFAMILY SSF161098 93 159 3.76E-15 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09565 62870cc6a77bf7e3209cc79ea948e5ce 338 PANTHER PTHR30465:SF0 1 168 7.8E-111 T 13-09-2016 PMA3_RS09565 62870cc6a77bf7e3209cc79ea948e5ce 338 PANTHER PTHR30465 194 337 7.8E-111 T 13-09-2016 PMA3_RS09565 62870cc6a77bf7e3209cc79ea948e5ce 338 Gene3D G3DSA:1.10.3720.10 90 162 2.0E-18 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09565 62870cc6a77bf7e3209cc79ea948e5ce 338 Gene3D G3DSA:1.10.3720.10 203 331 2.0E-18 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09565 62870cc6a77bf7e3209cc79ea948e5ce 338 PANTHER PTHR30465 1 168 7.8E-111 T 13-09-2016 PMA3_RS09565 62870cc6a77bf7e3209cc79ea948e5ce 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 336 7.7E-40 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS18205 b3205629397e4e59082a9c63a99c722f 308 Gene3D G3DSA:3.40.50.2300 18 140 2.7E-33 T 13-09-2016 PMA3_RS18205 b3205629397e4e59082a9c63a99c722f 308 Gene3D G3DSA:3.40.50.2300 141 301 1.1E-40 T 13-09-2016 PMA3_RS18205 b3205629397e4e59082a9c63a99c722f 308 SUPERFAMILY SSF53822 6 301 6.09E-70 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS18205 b3205629397e4e59082a9c63a99c722f 308 PANTHER PTHR32196 18 285 3.8E-94 T 13-09-2016 PMA3_RS18205 b3205629397e4e59082a9c63a99c722f 308 Pfam PF13407 Periplasmic binding protein domain 26 279 5.0E-45 T 13-09-2016 IPR025997 Periplasmic binding protein PMA3_RS18205 b3205629397e4e59082a9c63a99c722f 308 PANTHER PTHR32196:SF41 18 285 3.8E-94 T 13-09-2016 PMA3_RS02760 34cf32b805d1dd6900201ba1b3ae0560 214 PANTHER PTHR21600:SF23 32 137 1.6E-87 T 13-09-2016 PMA3_RS02760 34cf32b805d1dd6900201ba1b3ae0560 214 PANTHER PTHR21600:SF23 154 212 1.6E-87 T 13-09-2016 PMA3_RS02760 34cf32b805d1dd6900201ba1b3ae0560 214 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 40 209 7.3E-57 T 13-09-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PMA3_RS02760 34cf32b805d1dd6900201ba1b3ae0560 214 SUPERFAMILY SSF55120 34 212 1.92E-42 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS02760 34cf32b805d1dd6900201ba1b3ae0560 214 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 71 85 - T 13-09-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PMA3_RS02760 34cf32b805d1dd6900201ba1b3ae0560 214 PANTHER PTHR21600 32 137 1.6E-87 T 13-09-2016 PMA3_RS02760 34cf32b805d1dd6900201ba1b3ae0560 214 PANTHER PTHR21600 154 212 1.6E-87 T 13-09-2016 PMA3_RS02760 34cf32b805d1dd6900201ba1b3ae0560 214 Pfam PF00849 RNA pseudouridylate synthase 36 180 3.0E-15 T 13-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS02455 70d63ff71f3b6ae37e888de61126bf22 159 PANTHER PTHR36302:SF1 18 159 9.8E-28 T 13-09-2016 PMA3_RS02455 70d63ff71f3b6ae37e888de61126bf22 159 SUPERFAMILY SSF110087 1 149 1.96E-44 T 13-09-2016 IPR007410 DR1885-like metal-binding protein PMA3_RS02455 70d63ff71f3b6ae37e888de61126bf22 159 Pfam PF04314 Protein of unknown function (DUF461) 30 140 8.9E-33 T 13-09-2016 IPR007410 DR1885-like metal-binding protein PMA3_RS02455 70d63ff71f3b6ae37e888de61126bf22 159 PANTHER PTHR36302 18 159 9.8E-28 T 13-09-2016 PMA3_RS18350 4c28b85a39ddc65656e6459ec6fa38a5 390 Pfam PF07786 Protein of unknown function (DUF1624) 16 226 3.2E-14 T 13-09-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 PMA3_RS18350 4c28b85a39ddc65656e6459ec6fa38a5 390 PANTHER PTHR40407 1 390 5.1E-91 T 13-09-2016 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 PANTHER PTHR33751 111 322 1.1E-121 T 13-09-2016 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 1.1E-23 T 13-09-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 SUPERFAMILY SSF46626 55 78 3.99E-31 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 SUPERFAMILY SSF46626 125 222 3.99E-31 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 235 312 2.2E-10 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 145 219 4.0E-12 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 PANTHER PTHR33751:SF1 25 79 1.1E-121 T 13-09-2016 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 PANTHER PTHR33751:SF1 111 322 1.1E-121 T 13-09-2016 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 SUPERFAMILY SSF46626 229 319 3.01E-20 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 33 319 7.0E-75 T 13-09-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 PANTHER PTHR33751 25 79 1.1E-121 T 13-09-2016 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 Gene3D G3DSA:1.10.760.10 60 82 9.2E-30 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 Gene3D G3DSA:1.10.760.10 140 223 9.2E-30 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 PRINTS PR00605 Class IC cytochrome C signature 155 166 8.7E-5 T 13-09-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 PRINTS PR00605 Class IC cytochrome C signature 197 219 8.7E-5 T 13-09-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 Gene3D G3DSA:1.10.760.10 229 318 2.5E-23 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07530 4704b19ccc334f8f914fd77cce411b56 327 PIRSF PIRSF000006 1 319 1.6E-102 T 13-09-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 PMA3_RS19000 9542c1517028fef2559a2a9887614076 363 PANTHER PTHR30349 1 137 1.1E-53 T 13-09-2016 PMA3_RS19000 9542c1517028fef2559a2a9887614076 363 Gene3D G3DSA:3.10.310.10 178 331 1.5E-52 T 13-09-2016 PMA3_RS19000 9542c1517028fef2559a2a9887614076 363 Pfam PF04303 PrpF protein 3 352 7.3E-122 T 13-09-2016 IPR007400 PrpF protein PMA3_RS19000 9542c1517028fef2559a2a9887614076 363 SUPERFAMILY SSF54506 173 356 2.3E-57 T 13-09-2016 PMA3_RS19000 9542c1517028fef2559a2a9887614076 363 Gene3D G3DSA:3.10.310.10 2 177 1.6E-78 T 13-09-2016 PMA3_RS19000 9542c1517028fef2559a2a9887614076 363 PANTHER PTHR30349:SF39 1 137 1.1E-53 T 13-09-2016 PMA3_RS19000 9542c1517028fef2559a2a9887614076 363 SUPERFAMILY SSF54506 2 169 1.65E-65 T 13-09-2016 PMA3_RS12105 639c5fcb6a90fbd92839009c57f09c5e 361 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS12105 639c5fcb6a90fbd92839009c57f09c5e 361 PANTHER PTHR24220 8 253 6.9E-143 T 13-09-2016 PMA3_RS12105 639c5fcb6a90fbd92839009c57f09c5e 361 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 41 356 1.3E-117 T 13-09-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PMA3_RS12105 639c5fcb6a90fbd92839009c57f09c5e 361 Pfam PF00005 ABC transporter 26 168 6.2E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS12105 639c5fcb6a90fbd92839009c57f09c5e 361 Gene3D G3DSA:3.40.50.300 4 244 8.5E-84 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12105 639c5fcb6a90fbd92839009c57f09c5e 361 Pfam PF08402 TOBE domain 284 358 6.8E-10 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS12105 639c5fcb6a90fbd92839009c57f09c5e 361 PANTHER PTHR24220:SF150 8 253 6.9E-143 T 13-09-2016 PMA3_RS12105 639c5fcb6a90fbd92839009c57f09c5e 361 SUPERFAMILY SSF50331 244 359 1.7E-12 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS12105 639c5fcb6a90fbd92839009c57f09c5e 361 SMART SM00382 35 226 2.4E-19 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS12105 639c5fcb6a90fbd92839009c57f09c5e 361 SUPERFAMILY SSF52540 7 249 1.05E-89 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 SUPERFAMILY SSF81338 11 259 9.68E-76 T 13-09-2016 IPR023271 Aquaporin-like PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 PANTHER PTHR19139 13 263 8.1E-92 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 Pfam PF00230 Major intrinsic protein 6 254 4.5E-66 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 ProSitePatterns PS00221 MIP family signature. 69 77 - T 13-09-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 Gene3D G3DSA:1.20.1080.10 7 261 1.4E-85 T 13-09-2016 IPR023271 Aquaporin-like PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 TIGRFAM TIGR00861 MIP: MIP family channel proteins 16 254 2.4E-69 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 PANTHER PTHR19139:SF100 13 263 8.1E-92 T 13-09-2016 PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 PRINTS PR00783 Major intrinsic protein family signature 154 172 3.4E-50 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 PRINTS PR00783 Major intrinsic protein family signature 12 31 3.4E-50 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 PRINTS PR00783 Major intrinsic protein family signature 237 257 3.4E-50 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 PRINTS PR00783 Major intrinsic protein family signature 88 107 3.4E-50 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 PRINTS PR00783 Major intrinsic protein family signature 51 75 3.4E-50 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS23820 4fb7d7cd6a9b89c608a584ed02edd164 283 PRINTS PR00783 Major intrinsic protein family signature 187 209 3.4E-50 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 Pfam PF03466 LysR substrate binding domain 88 294 4.2E-40 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 Gene3D G3DSA:3.40.190.10 92 176 2.8E-23 T 13-09-2016 PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 SUPERFAMILY SSF53850 89 296 1.71E-41 T 13-09-2016 PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 Gene3D G3DSA:3.40.190.10 177 262 2.4E-18 T 13-09-2016 PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 SUPERFAMILY SSF46785 5 88 1.36E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.5E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.5E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.5E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 7.6E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 Gene3D G3DSA:1.10.10.10 6 86 3.0E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 PANTHER PTHR30537 1 312 5.9E-92 T 13-09-2016 PMA3_RS18145 0021f4f2c8bd27cc1167b86057b98901 316 PANTHER PTHR30537:SF5 1 312 5.9E-92 T 13-09-2016 PMA3_RS29940 5411568b3897111005abd56c6b140d48 346 PANTHER PTHR10264:SF80 22 300 2.4E-80 T 13-09-2016 PMA3_RS29940 5411568b3897111005abd56c6b140d48 346 SMART SM00244 59 233 9.7E-6 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS29940 5411568b3897111005abd56c6b140d48 346 Pfam PF01145 SPFH domain / Band 7 family 63 246 1.9E-28 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS29940 5411568b3897111005abd56c6b140d48 346 PANTHER PTHR10264 22 300 2.4E-80 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS29940 5411568b3897111005abd56c6b140d48 346 SUPERFAMILY SSF117892 95 238 3.01E-13 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS29940 5411568b3897111005abd56c6b140d48 346 PIRSF PIRSF005651 36 341 1.0E-85 T 13-09-2016 IPR010200 HflC GO:0016021|GO:0052547 PMA3_RS17115 562a33d9f191b66880d39aaff3326e4e 249 Pfam PF01904 Protein of unknown function DUF72 24 236 1.5E-45 T 13-09-2016 IPR002763 Protein of unknown function DUF72 PMA3_RS17115 562a33d9f191b66880d39aaff3326e4e 249 Gene3D G3DSA:3.20.20.410 2 240 4.4E-63 T 13-09-2016 IPR002763 Protein of unknown function DUF72 PMA3_RS17115 562a33d9f191b66880d39aaff3326e4e 249 SUPERFAMILY SSF117396 2 239 5.1E-66 T 13-09-2016 IPR002763 Protein of unknown function DUF72 PMA3_RS17115 562a33d9f191b66880d39aaff3326e4e 249 PANTHER PTHR30348:SF3 1 238 1.1E-66 T 13-09-2016 PMA3_RS17115 562a33d9f191b66880d39aaff3326e4e 249 PANTHER PTHR30348 1 238 1.1E-66 T 13-09-2016 PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.6E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.6E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.6E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 6.5E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.5E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.5E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.5E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 6.5E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.5E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.2E-69 T 13-09-2016 PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 SUPERFAMILY SSF51735 5 241 5.53E-84 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 PANTHER PTHR24322 10 183 1.7E-55 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11785 46b0bcee9437c21e1d6013c9b1404d7c 244 Gene3D G3DSA:3.40.50.720 2 242 3.7E-86 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS22845 fd81e70659a1cc37c51585494f3fb2c9 205 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 121 182 5.2E-8 T 13-09-2016 IPR007621 TPM domain PMA3_RS24430 15b60b5697633765a936e89ebedbeafe 476 Gene3D G3DSA:3.90.1150.10 358 473 9.9E-6 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS24430 15b60b5697633765a936e89ebedbeafe 476 PANTHER PTHR11751:SF314 90 476 1.0E-105 T 13-09-2016 PMA3_RS24430 15b60b5697633765a936e89ebedbeafe 476 Gene3D G3DSA:3.40.640.10 142 357 1.9E-62 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS24430 15b60b5697633765a936e89ebedbeafe 476 SUPERFAMILY SSF46785 3 73 1.07E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24430 15b60b5697633765a936e89ebedbeafe 476 PANTHER PTHR11751 90 476 1.0E-105 T 13-09-2016 PMA3_RS24430 15b60b5697633765a936e89ebedbeafe 476 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 4.1E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS24430 15b60b5697633765a936e89ebedbeafe 476 Gene3D G3DSA:1.10.10.10 4 72 5.9E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24430 15b60b5697633765a936e89ebedbeafe 476 SUPERFAMILY SSF53383 108 474 2.66E-85 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS24430 15b60b5697633765a936e89ebedbeafe 476 Pfam PF00155 Aminotransferase class I and II 140 464 2.3E-32 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS24430 15b60b5697633765a936e89ebedbeafe 476 SMART SM00345 10 69 9.9E-7 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12100 0559adadbe3ce04fcce85dc2fd4fea01 305 PANTHER PTHR30193 7 303 1.8E-100 T 13-09-2016 PMA3_RS12100 0559adadbe3ce04fcce85dc2fd4fea01 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 295 6.2E-17 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12100 0559adadbe3ce04fcce85dc2fd4fea01 305 Gene3D G3DSA:1.10.3720.10 12 287 1.7E-47 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12100 0559adadbe3ce04fcce85dc2fd4fea01 305 SUPERFAMILY SSF161098 12 294 4.77E-50 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12100 0559adadbe3ce04fcce85dc2fd4fea01 305 PANTHER PTHR30193:SF10 7 303 1.8E-100 T 13-09-2016 PMA3_RS18155 b726462ab2a82c10c076247fdcd03299 262 SUPERFAMILY SSF52402 1 256 1.78E-34 T 13-09-2016 PMA3_RS18155 b726462ab2a82c10c076247fdcd03299 262 PANTHER PTHR21294 1 204 2.2E-17 T 13-09-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PMA3_RS18155 b726462ab2a82c10c076247fdcd03299 262 Pfam PF01012 Electron transfer flavoprotein domain 28 208 9.7E-11 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS18155 b726462ab2a82c10c076247fdcd03299 262 Gene3D G3DSA:3.40.50.620 1 256 4.7E-31 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS18155 b726462ab2a82c10c076247fdcd03299 262 PANTHER PTHR21294:SF0 1 204 2.2E-17 T 13-09-2016 PMA3_RS12820 a2a7bccc4373d3c210daff2aa371c650 198 SUPERFAMILY SSF48695 15 198 1.21E-66 T 13-09-2016 IPR011031 Multihaem cytochrome PMA3_RS12820 a2a7bccc4373d3c210daff2aa371c650 198 PANTHER PTHR30333 1 198 4.6E-110 T 13-09-2016 PMA3_RS12820 a2a7bccc4373d3c210daff2aa371c650 198 PANTHER PTHR30333:SF1 1 198 4.6E-110 T 13-09-2016 PMA3_RS12820 a2a7bccc4373d3c210daff2aa371c650 198 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 20 192 3.8E-74 T 13-09-2016 IPR005126 NapC/NirT cytochrome c, N-terminal PMA3_RS12820 a2a7bccc4373d3c210daff2aa371c650 198 Gene3D G3DSA:1.10.3820.10 20 191 1.3E-25 T 13-09-2016 PMA3_RS12820 a2a7bccc4373d3c210daff2aa371c650 198 PIRSF PIRSF000013 1 198 4.5E-106 T 13-09-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 PMA3_RS12820 a2a7bccc4373d3c210daff2aa371c650 198 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 8 193 4.0E-101 T 13-09-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 PMA3_RS30025 562619e6cb890b0e59b3ae068d8f3b92 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.2E-36 T 13-09-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PMA3_RS30025 562619e6cb890b0e59b3ae068d8f3b92 156 SUPERFAMILY SSF81573 64 121 7.45E-14 T 13-09-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain PMA3_RS30025 562619e6cb890b0e59b3ae068d8f3b92 156 Gene3D G3DSA:1.20.5.620 63 122 7.3E-20 T 13-09-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain PMA3_RS30025 562619e6cb890b0e59b3ae068d8f3b92 156 PANTHER PTHR33445 1 156 3.9E-44 T 13-09-2016 PMA3_RS30025 562619e6cb890b0e59b3ae068d8f3b92 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.529 T 13-09-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PMA3_RS30025 562619e6cb890b0e59b3ae068d8f3b92 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 1.1E-45 T 13-09-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 PANTHER PTHR30511:SF0 38 409 9.8E-107 T 13-09-2016 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 SUPERFAMILY SSF50621 274 408 1.6E-38 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 Pfam PF00842 Alanine racemase, C-terminal domain 279 387 1.5E-27 T 13-09-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 Pfam PF01168 Alanine racemase, N-terminal domain 48 269 8.0E-45 T 13-09-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 PANTHER PTHR30511 38 409 9.8E-107 T 13-09-2016 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 PRINTS PR00992 Alanine racemase signature 201 212 3.6E-30 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 PRINTS PR00992 Alanine racemase signature 67 83 3.6E-30 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 PRINTS PR00992 Alanine racemase signature 244 271 3.6E-30 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 PRINTS PR00992 Alanine racemase signature 103 121 3.6E-30 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 PRINTS PR00992 Alanine racemase signature 312 327 3.6E-30 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 PRINTS PR00992 Alanine racemase signature 333 350 3.6E-30 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 SUPERFAMILY SSF51419 48 270 2.62E-42 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 Gene3D G3DSA:2.40.37.10 261 408 2.1E-42 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 Gene3D G3DSA:3.20.20.10 51 260 4.0E-46 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 72 82 - T 13-09-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 SMART SM01005 279 408 9.4E-43 T 13-09-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 Hamap MF_01201 Alanine racemase. 41 408 23.978 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS09710 edae2f0ec2735b48dc819edb837903fa 409 TIGRFAM TIGR00492 alr: alanine racemase 44 382 7.4E-70 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS24735 488d726be566e66bf50bbc96c3ddf620 300 PANTHER PTHR32322 1 291 8.4E-89 T 13-09-2016 PMA3_RS24735 488d726be566e66bf50bbc96c3ddf620 300 SUPERFAMILY SSF103481 193 288 1.96E-10 T 13-09-2016 PMA3_RS24735 488d726be566e66bf50bbc96c3ddf620 300 PANTHER PTHR32322:SF8 1 291 8.4E-89 T 13-09-2016 PMA3_RS24735 488d726be566e66bf50bbc96c3ddf620 300 Pfam PF00892 EamA-like transporter family 149 285 1.3E-13 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS24735 488d726be566e66bf50bbc96c3ddf620 300 Pfam PF00892 EamA-like transporter family 5 134 1.8E-11 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS24735 488d726be566e66bf50bbc96c3ddf620 300 SUPERFAMILY SSF103481 35 137 1.44E-13 T 13-09-2016 PMA3_RS29520 814913efc82dc87f6aad294d5a558077 301 Pfam PF00696 Amino acid kinase family 28 273 9.0E-44 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS29520 814913efc82dc87f6aad294d5a558077 301 PANTHER PTHR23342 1 297 3.0E-120 T 13-09-2016 PMA3_RS29520 814913efc82dc87f6aad294d5a558077 301 PRINTS PR00474 Glutamate 5-kinase family signature 247 267 2.7E-8 T 13-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PMA3_RS29520 814913efc82dc87f6aad294d5a558077 301 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 2.7E-8 T 13-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PMA3_RS29520 814913efc82dc87f6aad294d5a558077 301 PRINTS PR00474 Glutamate 5-kinase family signature 197 224 2.7E-8 T 13-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PMA3_RS29520 814913efc82dc87f6aad294d5a558077 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 272 1.8E-77 T 13-09-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS29520 814913efc82dc87f6aad294d5a558077 301 Gene3D G3DSA:3.40.1160.10 27 296 3.1E-102 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS29520 814913efc82dc87f6aad294d5a558077 301 PIRSF PIRSF000728 13 297 1.2E-109 T 13-09-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS29520 814913efc82dc87f6aad294d5a558077 301 SUPERFAMILY SSF53633 9 298 5.63E-97 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS29520 814913efc82dc87f6aad294d5a558077 301 Hamap MF_00082_B Acetylglutamate kinase [argB]. 26 297 37.026 T 13-09-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 PANTHER PTHR10890 2 460 3.9E-246 T 13-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 38.766 T 13-09-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 Pfam PF09190 DALR domain 340 401 1.6E-20 T 13-09-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 SUPERFAMILY SSF47323 316 458 2.48E-38 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 Gene3D G3DSA:1.20.120.640 306 391 3.5E-23 T 13-09-2016 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 9.0E-136 T 13-09-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 SUPERFAMILY SSF52374 3 313 6.17E-103 T 13-09-2016 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 SMART SM00840 340 401 1.5E-23 T 13-09-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 457 1.2E-177 T 13-09-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 Gene3D G3DSA:3.40.50.620 19 305 1.3E-111 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.5E-30 T 13-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.5E-30 T 13-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.5E-30 T 13-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PMA3_RS19810 f3e33535a1a26fca4b93d5da30c17460 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.5E-30 T 13-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 1.1E-38 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 1.1E-38 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 1.1E-38 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 1.1E-38 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.1E-38 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PANTHER PTHR22912:SF146 2 453 3.6E-202 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 SUPERFAMILY SSF51905 4 331 1.42E-56 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 Gene3D G3DSA:3.50.50.60 6 138 2.4E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 13-09-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 6.8E-66 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 6.8E-66 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 6.8E-66 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 6.8E-66 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 6.8E-66 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 6.8E-66 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 6.8E-66 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 358 6.8E-66 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 6.8E-66 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 450 8.3E-29 T 13-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 Gene3D G3DSA:3.50.50.60 139 327 9.1E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 Gene3D G3DSA:3.30.390.30 328 459 3.1E-36 T 13-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 322 2.8E-72 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PIRSF PIRSF000350 1 453 1.1E-74 T 13-09-2016 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 SUPERFAMILY SSF55424 337 459 9.11E-32 T 13-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 459 1.9E-146 T 13-09-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 PMA3_RS15785 31a2db390e72fffa9a615ca3b0a6956f 460 PANTHER PTHR22912 2 453 3.6E-202 T 13-09-2016 PMA3_RS05190 0c825e3922c87fb8395b95f12371d1b0 345 Gene3D G3DSA:3.60.15.10 25 137 3.4E-12 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS05190 0c825e3922c87fb8395b95f12371d1b0 345 PANTHER PTHR11203:SF35 8 211 4.3E-72 T 13-09-2016 PMA3_RS05190 0c825e3922c87fb8395b95f12371d1b0 345 SUPERFAMILY SSF56281 10 311 3.17E-58 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS05190 0c825e3922c87fb8395b95f12371d1b0 345 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 4 328 9.3E-147 T 13-09-2016 IPR026360 Putative exonuclease, DNA ligase-associated PMA3_RS05190 0c825e3922c87fb8395b95f12371d1b0 345 PANTHER PTHR11203 8 211 4.3E-72 T 13-09-2016 PMA3_RS08840 155ab3903bdf7e0b0bf55a3eeb21a90f 111 PANTHER PTHR30579:SF0 9 105 2.3E-17 T 13-09-2016 PMA3_RS08840 155ab3903bdf7e0b0bf55a3eeb21a90f 111 Pfam PF03466 LysR substrate binding domain 9 107 2.0E-13 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS08840 155ab3903bdf7e0b0bf55a3eeb21a90f 111 SUPERFAMILY SSF53850 10 109 7.42E-13 T 13-09-2016 PMA3_RS08840 155ab3903bdf7e0b0bf55a3eeb21a90f 111 Gene3D G3DSA:3.40.190.10 9 68 8.1E-10 T 13-09-2016 PMA3_RS08840 155ab3903bdf7e0b0bf55a3eeb21a90f 111 PANTHER PTHR30579 9 105 2.3E-17 T 13-09-2016 PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 199 281 2.1E-36 T 13-09-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 Gene3D G3DSA:3.40.50.620 1 190 7.5E-56 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 262 288 - T 13-09-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 Gene3D G3DSA:3.40.50.1220 194 315 9.0E-61 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 Pfam PF01012 Electron transfer flavoprotein domain 14 168 2.0E-35 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 PANTHER PTHR10909:SF294 113 314 1.4E-119 T 13-09-2016 PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 PIRSF PIRSF000089 1 318 6.5E-101 T 13-09-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 PANTHER PTHR10909 113 314 1.4E-119 T 13-09-2016 PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 SMART SM00893 8 191 3.8E-41 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 SUPERFAMILY SSF52402 3 194 1.4E-49 T 13-09-2016 PMA3_RS18665 597d6f2f514be896a8e8ad89665a0439 318 SUPERFAMILY SSF52467 196 315 3.93E-48 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 13-09-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 Gene3D G3DSA:3.40.50.300 218 364 3.1E-43 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 PANTHER PTHR24031:SF180 1 461 6.1E-248 T 13-09-2016 PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 PANTHER PTHR24031 1 461 6.1E-248 T 13-09-2016 PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 Pfam PF00270 DEAD/DEAH box helicase 30 196 2.5E-46 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 Pfam PF00271 Helicase conserved C-terminal domain 232 339 2.1E-23 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 SMART SM00490 258 339 7.1E-26 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 Gene3D G3DSA:3.40.50.300 5 210 2.1E-73 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 SMART SM00487 25 222 1.3E-57 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 SUPERFAMILY SSF52540 74 357 1.35E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28150 9203cc2457a3f0c0eed5c99befe0e84c 461 Pfam PF03880 DbpA RNA binding domain 389 459 2.1E-25 T 13-09-2016 IPR005580 DbpA, RNA-binding domain PMA3_RS10010 7d9766e0dd03dab0f3ea587310d24761 113 PANTHER PTHR11803 12 109 4.2E-26 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS10010 7d9766e0dd03dab0f3ea587310d24761 113 Gene3D G3DSA:3.30.1330.40 11 110 7.8E-25 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS10010 7d9766e0dd03dab0f3ea587310d24761 113 SUPERFAMILY SSF55298 4 110 3.14E-29 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS10010 7d9766e0dd03dab0f3ea587310d24761 113 Pfam PF01042 Endoribonuclease L-PSP 12 109 2.2E-21 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS10010 7d9766e0dd03dab0f3ea587310d24761 113 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 89 107 - T 13-09-2016 IPR019897 RidA, conserved site PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 Gene3D G3DSA:3.30.230.10 7 160 4.3E-53 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 Gene3D G3DSA:3.30.70.890 163 279 2.8E-36 T 13-09-2016 IPR013750 GHMP kinase, C-terminal domain PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 PANTHER PTHR20861:SF2 5 278 1.5E-93 T 13-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 280 3.8E-89 T 13-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 PIRSF PIRSF010376 4 280 2.3E-84 T 13-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 Pfam PF00288 GHMP kinases N terminal domain 88 145 1.4E-8 T 13-09-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 Pfam PF08544 GHMP kinases C terminal 210 255 6.1E-5 T 13-09-2016 IPR013750 GHMP kinase, C-terminal domain PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 SUPERFAMILY SSF54211 6 159 3.42E-46 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 SUPERFAMILY SSF55060 161 279 8.15E-31 T 13-09-2016 IPR013750 GHMP kinase, C-terminal domain PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 272 32.832 T 13-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS03750 ff375d3e31e036ab9a3b8e5e60649449 283 PANTHER PTHR20861 5 278 1.5E-93 T 13-09-2016 PMA3_RS09490 63c08fb6cedbcd33dc7b1191f558e893 236 Gene3D G3DSA:1.10.3720.10 20 231 1.7E-43 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09490 63c08fb6cedbcd33dc7b1191f558e893 236 PANTHER PTHR30614 1 236 6.9E-65 T 13-09-2016 PMA3_RS09490 63c08fb6cedbcd33dc7b1191f558e893 236 SUPERFAMILY SSF161098 21 218 3.14E-38 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09490 63c08fb6cedbcd33dc7b1191f558e893 236 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 127 3.5E-21 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS09490 63c08fb6cedbcd33dc7b1191f558e893 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 230 1.2E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00465 bb04e63b488f3ed9b008cd14390d239b 826 Pfam PF14559 Tetratricopeptide repeat 113 173 1.7E-5 T 13-09-2016 PMA3_RS00465 bb04e63b488f3ed9b008cd14390d239b 826 SUPERFAMILY SSF48452 267 287 1.07E-14 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00465 bb04e63b488f3ed9b008cd14390d239b 826 SUPERFAMILY SSF48452 102 239 1.07E-14 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00465 bb04e63b488f3ed9b008cd14390d239b 826 SMART SM00028 100 133 0.0028 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS00465 bb04e63b488f3ed9b008cd14390d239b 826 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 17 826 6.4E-267 T 13-09-2016 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 PMA3_RS00465 bb04e63b488f3ed9b008cd14390d239b 826 Gene3D G3DSA:1.25.40.10 433 516 4.8E-19 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00465 bb04e63b488f3ed9b008cd14390d239b 826 Gene3D G3DSA:1.25.40.10 328 383 4.8E-19 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00465 bb04e63b488f3ed9b008cd14390d239b 826 Gene3D G3DSA:1.25.40.10 101 218 4.8E-19 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS03830 e581ec26dab086f9037ab42d415ce0e2 300 SUPERFAMILY SSF51735 1 295 7.0E-43 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03830 e581ec26dab086f9037ab42d415ce0e2 300 Gene3D G3DSA:3.40.50.720 1 198 6.8E-21 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03830 e581ec26dab086f9037ab42d415ce0e2 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 222 4.6E-22 T 13-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PMA3_RS03830 e581ec26dab086f9037ab42d415ce0e2 300 Gene3D G3DSA:3.90.25.10 199 245 4.6E-6 T 13-09-2016 PMA3_RS03830 e581ec26dab086f9037ab42d415ce0e2 300 PANTHER PTHR11092 1 296 7.4E-138 T 13-09-2016 IPR010099 Epimerase family protein SDR39U1 PMA3_RS03830 e581ec26dab086f9037ab42d415ce0e2 300 PANTHER PTHR11092:SF0 1 296 7.4E-138 T 13-09-2016 PMA3_RS03830 e581ec26dab086f9037ab42d415ce0e2 300 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 4.3E-108 T 13-09-2016 IPR010099 Epimerase family protein SDR39U1 PMA3_RS03830 e581ec26dab086f9037ab42d415ce0e2 300 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 1.9E-17 T 13-09-2016 IPR013549 Domain of unknown function DUF1731 PMA3_RS13390 3d922cc2bba2c334d4847ed31e53c95a 308 PANTHER PTHR30193 2 307 5.3E-143 T 13-09-2016 PMA3_RS13390 3d922cc2bba2c334d4847ed31e53c95a 308 SUPERFAMILY SSF161098 68 293 1.2E-48 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS13390 3d922cc2bba2c334d4847ed31e53c95a 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 304 2.1E-16 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS13390 3d922cc2bba2c334d4847ed31e53c95a 308 Gene3D G3DSA:1.10.3720.10 20 296 2.0E-49 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS13390 3d922cc2bba2c334d4847ed31e53c95a 308 PANTHER PTHR30193:SF28 2 307 5.3E-143 T 13-09-2016 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 PANTHER PTHR11451:SF3 397 571 7.1E-157 T 13-09-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 Gene3D G3DSA:3.30.930.10 1 228 1.1E-103 T 13-09-2016 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 Gene3D G3DSA:3.30.930.10 405 465 1.1E-103 T 13-09-2016 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 SUPERFAMILY SSF55681 405 476 6.27E-106 T 13-09-2016 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 SUPERFAMILY SSF55681 10 237 6.27E-106 T 13-09-2016 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 SUPERFAMILY SSF55826 218 388 1.31E-31 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 PIRSF PIRSF001535 1 571 1.1E-267 T 13-09-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 41.733 T 13-09-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 1.3E-243 T 13-09-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.7E-18 T 13-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.7E-18 T 13-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.7E-18 T 13-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.7E-18 T 13-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 SUPERFAMILY SSF52954 461 569 8.91E-27 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 1.1E-47 T 13-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 375 5.3E-25 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 Gene3D G3DSA:3.90.960.10 254 386 5.1E-31 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 PANTHER PTHR11451 397 571 7.1E-157 T 13-09-2016 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 PANTHER PTHR11451 4 244 7.1E-157 T 13-09-2016 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 Pfam PF03129 Anticodon binding domain 473 567 2.6E-15 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 PANTHER PTHR11451:SF3 4 244 7.1E-157 T 13-09-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PMA3_RS05115 bcd13582f4e3794b5638ac46dddf14b3 571 Gene3D G3DSA:3.40.50.800 469 569 4.7E-27 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS19380 474c9bc2d05cb705f193ce40ca6fcf43 129 PRINTS PR00604 Class IA and IB cytochrome C signature 67 77 7.3E-21 T 13-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 PMA3_RS19380 474c9bc2d05cb705f193ce40ca6fcf43 129 PRINTS PR00604 Class IA and IB cytochrome C signature 81 97 7.3E-21 T 13-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 PMA3_RS19380 474c9bc2d05cb705f193ce40ca6fcf43 129 PRINTS PR00604 Class IA and IB cytochrome C signature 117 125 7.3E-21 T 13-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 PMA3_RS19380 474c9bc2d05cb705f193ce40ca6fcf43 129 PRINTS PR00604 Class IA and IB cytochrome C signature 38 45 7.3E-21 T 13-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 PMA3_RS19380 474c9bc2d05cb705f193ce40ca6fcf43 129 PRINTS PR00604 Class IA and IB cytochrome C signature 100 110 7.3E-21 T 13-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 PMA3_RS19380 474c9bc2d05cb705f193ce40ca6fcf43 129 PRINTS PR00604 Class IA and IB cytochrome C signature 51 66 7.3E-21 T 13-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 PMA3_RS19380 474c9bc2d05cb705f193ce40ca6fcf43 129 PANTHER PTHR11961 1 124 2.7E-33 T 13-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 PMA3_RS19380 474c9bc2d05cb705f193ce40ca6fcf43 129 Gene3D G3DSA:1.10.760.10 25 128 8.1E-36 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS19380 474c9bc2d05cb705f193ce40ca6fcf43 129 SUPERFAMILY SSF46626 25 127 4.17E-32 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS19380 474c9bc2d05cb705f193ce40ca6fcf43 129 Pfam PF00034 Cytochrome c 28 126 1.2E-8 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 PIRSF PIRSF004486 4 315 6.5E-99 T 13-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 PANTHER PTHR11265 9 315 4.4E-143 T 13-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 314 37.994 T 13-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 Gene3D G3DSA:1.10.150.170 116 219 3.3E-34 T 13-09-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 Pfam PF01795 MraW methylase family 7 313 1.1E-107 T 13-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 PANTHER PTHR11265:SF0 9 315 4.4E-143 T 13-09-2016 PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 SUPERFAMILY SSF81799 118 217 1.44E-33 T 13-09-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 7 313 1.1E-110 T 13-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 SUPERFAMILY SSF53335 8 117 2.81E-46 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 SUPERFAMILY SSF53335 217 314 2.81E-46 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 Gene3D G3DSA:3.40.50.150 9 114 1.1E-48 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04105 a58ef2563d99d2eed43c2b2aff814645 315 Gene3D G3DSA:3.40.50.150 220 314 1.1E-48 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS23945 c41e4813671d0ad95300fe1711978fb5 124 PIRSF PIRSF006298 1 121 5.5E-38 T 13-09-2016 IPR016480 Glucose translocase, bactoprenol-linked PMA3_RS23945 c41e4813671d0ad95300fe1711978fb5 124 PANTHER PTHR38459:SF1 1 124 8.5E-17 T 13-09-2016 PMA3_RS23945 c41e4813671d0ad95300fe1711978fb5 124 Pfam PF04138 GtrA-like protein 11 119 1.6E-10 T 13-09-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PMA3_RS23945 c41e4813671d0ad95300fe1711978fb5 124 PANTHER PTHR38459 1 124 8.5E-17 T 13-09-2016 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 714 748 1.5E-9 T 13-09-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 604 627 0.0014 T 13-09-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 SMART SM00493 3 139 1.3E-29 T 13-09-2016 IPR006171 Toprim domain PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Gene3D G3DSA:1.10.460.10 171 218 4.4E-58 T 13-09-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Gene3D G3DSA:1.10.460.10 481 585 4.4E-58 T 13-09-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 727 56.597 T 13-09-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Gene3D G3DSA:3.30.65.10 710 747 1.6E-11 T 13-09-2016 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Gene3D G3DSA:3.30.65.10 591 629 6.1E-12 T 13-09-2016 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Gene3D G3DSA:3.30.65.10 749 810 7.0E-23 T 13-09-2016 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 SMART SM00436 140 228 2.4E-48 T 13-09-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Gene3D G3DSA:2.70.20.10 345 480 7.3E-34 T 13-09-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Gene3D G3DSA:2.70.20.10 220 344 1.4E-34 T 13-09-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 13-09-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 1.5E-247 T 13-09-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 PANTHER PTHR11390:SF27 1 37 0.0 T 13-09-2016 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 PANTHER PTHR11390:SF27 74 780 0.0 T 13-09-2016 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 797 3.6E-11 T 13-09-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 867 2.5E-19 T 13-09-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 SUPERFAMILY SSF57783 704 746 7.14E-8 T 13-09-2016 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 SUPERFAMILY SSF57783 748 810 3.74E-17 T 13-09-2016 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Gene3D G3DSA:2.20.25.10 812 869 4.1E-29 T 13-09-2016 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Pfam PF01751 Toprim domain 5 149 2.5E-32 T 13-09-2016 IPR006171 Toprim domain PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 1.0E-36 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 1.0E-36 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 497 511 1.0E-36 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 1.0E-36 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 1.0E-36 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 PANTHER PTHR11390 1 37 0.0 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 PANTHER PTHR11390 74 780 0.0 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 SUPERFAMILY SSF56712 3 614 1.44E-201 T 13-09-2016 IPR023405 DNA topoisomerase, type IA, core domain PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 SUPERFAMILY SSF57783 813 869 2.38E-22 T 13-09-2016 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Gene3D G3DSA:3.40.50.140 1 170 3.7E-57 T 13-09-2016 IPR006171 Toprim domain PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 SMART SM00437 279 534 1.3E-118 T 13-09-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PMA3_RS08620 5ab75ea107182b24b6f963fe8f473e69 877 Pfam PF01131 DNA topoisomerase 164 572 9.1E-128 T 13-09-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 PANTHER PTHR11751:SF10 101 496 1.7E-108 T 13-09-2016 PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 SMART SM00345 26 85 2.0E-10 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 PANTHER PTHR11751 101 496 1.7E-108 T 13-09-2016 PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 3.9E-12 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 SUPERFAMILY SSF46785 15 87 3.4E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 Gene3D G3DSA:1.10.10.10 12 85 4.4E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 SUPERFAMILY SSF53383 116 493 1.32E-90 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 Pfam PF00155 Aminotransferase class I and II 148 483 1.8E-27 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 Gene3D G3DSA:3.40.640.10 165 384 4.1E-58 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 1.6E-5 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS10365 7363d11c4487b9ddf036ce8844853447 502 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 1.6E-5 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Gene3D G3DSA:3.90.55.10 783 842 7.0E-7 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Gene3D G3DSA:3.40.228.10 491 595 3.5E-74 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Gene3D G3DSA:3.40.228.10 217 335 3.5E-74 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 PANTHER PTHR11615:SF165 700 839 0.0 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 PANTHER PTHR11615:SF165 34 416 0.0 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Pfam PF01568 Molydopterin dinucleotide binding domain 1092 1206 2.5E-20 T 13-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 SUPERFAMILY SSF53706 5 1073 0.0 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1129 1156 - T 13-09-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Gene3D G3DSA:3.40.50.740 596 782 1.7E-58 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Gene3D G3DSA:3.40.50.740 108 203 2.2E-4 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Gene3D G3DSA:2.40.40.20 1059 1238 5.5E-43 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 13-09-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 PANTHER PTHR11615 700 839 0.0 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 PANTHER PTHR11615 855 877 0.0 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1239 0.0 T 13-09-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 780 797 - T 13-09-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 SUPERFAMILY SSF50692 1086 1238 1.79E-45 T 13-09-2016 IPR009010 Aspartate decarboxylase-like domain PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Gene3D G3DSA:2.20.25.90 52 98 8.8E-32 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 PANTHER PTHR11615:SF165 999 1233 0.0 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Pfam PF00384 Molybdopterin oxidoreductase 108 836 1.7E-164 T 13-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 PANTHER PTHR11615:SF165 855 877 0.0 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 SMART SM00926 43 105 5.2E-8 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.4E-16 T 13-09-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 Gene3D G3DSA:4.10.1200.10 2 25 2.3E-6 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 PANTHER PTHR11615 34 416 0.0 T 13-09-2016 PMA3_RS16190 5c25199a7217c7535044e9752f33387a 1257 PANTHER PTHR11615 999 1233 0.0 T 13-09-2016 PMA3_RS13640 c816eaf67e48d2091ba32d3ea8e44762 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 90 1.2E-11 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS13640 c816eaf67e48d2091ba32d3ea8e44762 340 Gene3D G3DSA:3.90.180.10 3 141 6.9E-23 T 13-09-2016 IPR011032 GroES-like PMA3_RS13640 c816eaf67e48d2091ba32d3ea8e44762 340 Pfam PF00107 Zinc-binding dehydrogenase 163 272 1.5E-18 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS13640 c816eaf67e48d2091ba32d3ea8e44762 340 Gene3D G3DSA:3.40.50.720 142 302 3.8E-35 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13640 c816eaf67e48d2091ba32d3ea8e44762 340 SMART SM00829 11 335 1.0E-11 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS13640 c816eaf67e48d2091ba32d3ea8e44762 340 SUPERFAMILY SSF51735 119 277 4.76E-33 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13640 c816eaf67e48d2091ba32d3ea8e44762 340 PANTHER PTHR11695:SF605 16 327 2.6E-93 T 13-09-2016 PMA3_RS13640 c816eaf67e48d2091ba32d3ea8e44762 340 PANTHER PTHR11695 16 327 2.6E-93 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS13640 c816eaf67e48d2091ba32d3ea8e44762 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 13-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PMA3_RS13640 c816eaf67e48d2091ba32d3ea8e44762 340 SUPERFAMILY SSF50129 2 151 4.87E-27 T 13-09-2016 IPR011032 GroES-like PMA3_RS23360 e21a59f7f76472debcfe32136ff83b4c 151 Pfam PF05258 Protein of unknown function (DUF721) 19 97 6.6E-11 T 13-09-2016 IPR007922 Protein of unknown function DUF721/UPF0232 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 SUPERFAMILY SSF47384 195 276 1.84E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 PANTHER PTHR24423 94 103 2.1E-76 T 13-09-2016 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 Gene3D G3DSA:1.10.287.130 202 264 3.9E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 SMART SM00387 323 433 1.4E-31 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 SMART SM00304 159 211 0.0016 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 PANTHER PTHR24423:SF564 94 103 2.1E-76 T 13-09-2016 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 3.9E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 3.9E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 3.9E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 3.9E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 SMART SM00388 212 277 2.8E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 431 5.7E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 Gene3D G3DSA:3.30.565.10 265 431 4.8E-38 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 SUPERFAMILY SSF55874 267 431 3.67E-39 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 PANTHER PTHR24423:SF564 153 430 2.1E-76 T 13-09-2016 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 276 1.6E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15795 059c7c0e43fa34d8c5180c59c03618ab 433 PANTHER PTHR24423 153 430 2.1E-76 T 13-09-2016 PMA3_RS04245 05e2121711ba9d1940b7f829be873451 218 Pfam PF08348 YheO-like PAS domain 20 125 6.5E-26 T 13-09-2016 IPR013559 YheO-like PMA3_RS04245 05e2121711ba9d1940b7f829be873451 218 PANTHER PTHR35568 1 217 2.2E-81 T 13-09-2016 PMA3_RS04245 05e2121711ba9d1940b7f829be873451 218 PANTHER PTHR35568:SF1 1 217 2.2E-81 T 13-09-2016 PMA3_RS04245 05e2121711ba9d1940b7f829be873451 218 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 20 124 6.0E-52 T 13-09-2016 IPR013559 YheO-like PMA3_RS04245 05e2121711ba9d1940b7f829be873451 218 Pfam PF13309 HTH domain 153 214 7.8E-17 T 13-09-2016 PMA3_RS11705 fb65bbcfc4cc2718e01e7710e580c61f 316 Gene3D G3DSA:3.10.129.10 189 303 5.0E-25 T 13-09-2016 IPR029069 HotDog domain PMA3_RS11705 fb65bbcfc4cc2718e01e7710e580c61f 316 SUPERFAMILY SSF50249 4 123 4.45E-33 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS11705 fb65bbcfc4cc2718e01e7710e580c61f 316 Pfam PF01575 MaoC like domain 189 291 6.3E-16 T 13-09-2016 IPR002539 MaoC-like domain PMA3_RS11705 fb65bbcfc4cc2718e01e7710e580c61f 316 PANTHER PTHR34075 1 134 3.0E-26 T 13-09-2016 PMA3_RS11705 fb65bbcfc4cc2718e01e7710e580c61f 316 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 18 53 2.7E-11 T 13-09-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal PMA3_RS11705 fb65bbcfc4cc2718e01e7710e580c61f 316 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 55 119 5.4E-18 T 13-09-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal PMA3_RS11705 fb65bbcfc4cc2718e01e7710e580c61f 316 SUPERFAMILY SSF54637 184 302 6.27E-25 T 13-09-2016 IPR029069 HotDog domain PMA3_RS11705 fb65bbcfc4cc2718e01e7710e580c61f 316 PANTHER PTHR34075:SF2 1 134 3.0E-26 T 13-09-2016 PMA3_RS29750 ddd6851090868312787bcbe0ccdadb1c 201 SUPERFAMILY SSF55486 51 200 2.78E-11 T 13-09-2016 PMA3_RS29750 ddd6851090868312787bcbe0ccdadb1c 201 Gene3D G3DSA:3.40.390.10 64 199 2.8E-9 T 13-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PMA3_RS29750 ddd6851090868312787bcbe0ccdadb1c 201 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 99 196 7.2E-6 T 13-09-2016 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 Gene3D G3DSA:1.10.10.10 788 849 6.1E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 SMART SM00421 787 844 3.8E-23 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 Gene3D G3DSA:1.25.40.10 424 761 2.3E-25 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 SUPERFAMILY SSF52540 10 216 6.69E-5 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 820 832 5.1E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 804 820 5.1E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 790 804 5.1E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 SUPERFAMILY SSF48452 407 613 2.61E-6 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 SUPERFAMILY SSF46894 785 849 4.42E-20 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 PANTHER PTHR26402:SF437 321 332 2.9E-15 T 13-09-2016 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 ProSitePatterns PS00622 LuxR-type HTH domain signature. 804 831 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 PANTHER PTHR26402 321 332 2.9E-15 T 13-09-2016 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 Pfam PF00196 Bacterial regulatory proteins, luxR family 789 843 4.3E-18 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 PANTHER PTHR26402 757 844 2.9E-15 T 13-09-2016 PMA3_RS24840 3fed56edae72c9b759d433aee1b0fd15 851 PANTHER PTHR26402:SF437 757 844 2.9E-15 T 13-09-2016 PMA3_RS21075 68024b86df8d43c3c49d082b2a437c90 402 SUPERFAMILY SSF103473 6 389 2.75E-54 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS21075 68024b86df8d43c3c49d082b2a437c90 402 Gene3D G3DSA:1.20.1250.20 10 186 1.9E-20 T 13-09-2016 PMA3_RS21075 68024b86df8d43c3c49d082b2a437c90 402 Gene3D G3DSA:1.20.1250.20 210 393 2.8E-19 T 13-09-2016 PMA3_RS21075 68024b86df8d43c3c49d082b2a437c90 402 PANTHER PTHR11360:SF115 4 396 3.4E-155 T 13-09-2016 PMA3_RS21075 68024b86df8d43c3c49d082b2a437c90 402 Pfam PF07690 Major Facilitator Superfamily 17 316 8.3E-30 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS21075 68024b86df8d43c3c49d082b2a437c90 402 PANTHER PTHR11360 4 396 3.4E-155 T 13-09-2016 PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 SUPERFAMILY SSF54631 227 368 9.1E-27 T 13-09-2016 PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 SUPERFAMILY SSF56176 367 445 1.06E-14 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 PANTHER PTHR22777:SF18 19 442 2.1E-170 T 13-09-2016 PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 Pfam PF00571 CBS domain 237 288 1.0E-7 T 13-09-2016 IPR000644 CBS domain PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 Pfam PF00571 CBS domain 303 353 1.2E-5 T 13-09-2016 IPR000644 CBS domain PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 Gene3D G3DSA:3.30.465.10 361 444 2.8E-18 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 SMART SM00116 305 353 0.96 T 13-09-2016 IPR000644 CBS domain PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 SMART SM00116 239 288 1.3E-5 T 13-09-2016 IPR000644 CBS domain PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 Gene3D G3DSA:3.10.580.10 220 360 2.6E-18 T 13-09-2016 PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 PANTHER PTHR22777 19 442 2.1E-170 T 13-09-2016 PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 Pfam PF03471 Transporter associated domain 372 442 3.2E-17 T 13-09-2016 IPR005170 Transporter-associated domain PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 SMART SM01091 368 446 9.0E-16 T 13-09-2016 IPR005170 Transporter-associated domain PMA3_RS29675 18b17cb8f5998356223fed9305668396 446 Pfam PF01595 Domain of unknown function DUF21 21 208 1.1E-48 T 13-09-2016 IPR002550 Domain of unknown function DUF21 PMA3_RS16180 1466c7b9cbdd82671f19b1f4455ae027 251 PANTHER PTHR30598 1 220 3.6E-50 T 13-09-2016 PMA3_RS16180 1466c7b9cbdd82671f19b1f4455ae027 251 PANTHER PTHR30598:SF1 1 220 3.6E-50 T 13-09-2016 PMA3_RS16180 1466c7b9cbdd82671f19b1f4455ae027 251 Gene3D G3DSA:1.10.3480.10 9 134 2.9E-5 T 13-09-2016 IPR020945 DMSO/Nitrate reductase chaperone PMA3_RS16180 1466c7b9cbdd82671f19b1f4455ae027 251 SUPERFAMILY SSF89155 2 163 8.5E-29 T 13-09-2016 IPR020945 DMSO/Nitrate reductase chaperone PMA3_RS16180 1466c7b9cbdd82671f19b1f4455ae027 251 Pfam PF02613 Nitrate reductase delta subunit 37 158 6.0E-11 T 13-09-2016 IPR020945 DMSO/Nitrate reductase chaperone PMA3_RS16180 1466c7b9cbdd82671f19b1f4455ae027 251 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 1.7E-35 T 13-09-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 SUPERFAMILY SSF50129 93 196 7.77E-30 T 13-09-2016 IPR011032 GroES-like PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 SUPERFAMILY SSF50129 6 64 7.77E-30 T 13-09-2016 IPR011032 GroES-like PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 162 1.3E-7 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 Gene3D G3DSA:3.90.180.10 7 203 6.4E-38 T 13-09-2016 IPR011032 GroES-like PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 SUPERFAMILY SSF51735 167 337 7.81E-38 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 PANTHER PTHR11695:SF294 86 364 3.6E-84 T 13-09-2016 PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 PANTHER PTHR11695:SF294 23 59 3.6E-84 T 13-09-2016 PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 PANTHER PTHR11695 86 364 3.6E-84 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 PANTHER PTHR11695 23 59 3.6E-84 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 Gene3D G3DSA:3.40.50.720 204 331 5.8E-25 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 Pfam PF00107 Zinc-binding dehydrogenase 204 322 4.6E-22 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS10235 b17b782e39007e02527a170bdbf16717 367 SMART SM00829 18 360 2.1E-14 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 240 4.6E-79 T 13-09-2016 IPR013360 Pilus biogenesis/stability type IV, PilW PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 Gene3D G3DSA:1.25.40.10 39 116 1.3E-18 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 PANTHER PTHR23083 39 246 4.7E-27 T 13-09-2016 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 SMART SM00028 71 104 50.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 SMART SM00028 141 174 0.45 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 SMART SM00028 105 140 190.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 SMART SM00028 175 208 200.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 SMART SM00028 37 70 0.14 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 Gene3D G3DSA:1.25.40.10 117 213 2.3E-15 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 Pfam PF13424 Tetratricopeptide repeat 105 172 3.6E-10 T 13-09-2016 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 Pfam PF13181 Tetratricopeptide repeat 39 69 0.055 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS24225 f6f7bdc97203fc00577cbf9a2abe2668 252 SUPERFAMILY SSF48452 38 208 1.9E-25 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS19875 e32cfc4a1b6c91b66de1e10a29ac9180 207 PANTHER PTHR11260 3 137 3.6E-23 T 13-09-2016 PMA3_RS19875 e32cfc4a1b6c91b66de1e10a29ac9180 207 SUPERFAMILY SSF52833 1 83 3.86E-14 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS19875 e32cfc4a1b6c91b66de1e10a29ac9180 207 PANTHER PTHR11260:SF178 3 137 3.6E-23 T 13-09-2016 PMA3_RS19875 e32cfc4a1b6c91b66de1e10a29ac9180 207 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 71 1.8E-8 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS19875 e32cfc4a1b6c91b66de1e10a29ac9180 207 Gene3D G3DSA:1.20.1050.10 86 192 4.9E-9 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS19875 e32cfc4a1b6c91b66de1e10a29ac9180 207 Gene3D G3DSA:3.40.30.10 3 85 8.6E-19 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS19875 e32cfc4a1b6c91b66de1e10a29ac9180 207 SUPERFAMILY SSF47616 79 203 3.17E-11 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS14940 697167e633a9dc961b9c8c2af38f1173 252 PANTHER PTHR12993 37 223 7.9E-14 T 13-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PMA3_RS14940 697167e633a9dc961b9c8c2af38f1173 252 Gene3D G3DSA:3.40.50.10320 37 227 9.4E-31 T 13-09-2016 IPR024078 Putative deacetylase LmbE-like domain PMA3_RS14940 697167e633a9dc961b9c8c2af38f1173 252 SUPERFAMILY SSF102588 38 249 3.79E-40 T 13-09-2016 IPR024078 Putative deacetylase LmbE-like domain PMA3_RS14940 697167e633a9dc961b9c8c2af38f1173 252 Pfam PF02585 GlcNAc-PI de-N-acetylase 42 168 3.3E-18 T 13-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PMA3_RS26935 f1714b3e35feffc210c21c8d6ba68b1f 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 2.3E-23 T 13-09-2016 IPR016188 PurM-like, N-terminal domain PMA3_RS26935 f1714b3e35feffc210c21c8d6ba68b1f 321 PANTHER PTHR30270 1 321 1.2E-104 T 13-09-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PMA3_RS26935 f1714b3e35feffc210c21c8d6ba68b1f 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 317 2.0E-91 T 13-09-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PMA3_RS26935 f1714b3e35feffc210c21c8d6ba68b1f 321 PANTHER PTHR30270:SF0 1 321 1.2E-104 T 13-09-2016 PMA3_RS26935 f1714b3e35feffc210c21c8d6ba68b1f 321 SUPERFAMILY SSF56042 144 303 6.8E-34 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS26935 f1714b3e35feffc210c21c8d6ba68b1f 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 314 29.258 T 13-09-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PMA3_RS26935 f1714b3e35feffc210c21c8d6ba68b1f 321 Gene3D G3DSA:3.90.650.10 145 317 5.2E-43 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS26935 f1714b3e35feffc210c21c8d6ba68b1f 321 SUPERFAMILY SSF55326 1 138 1.64E-32 T 13-09-2016 PMA3_RS26935 f1714b3e35feffc210c21c8d6ba68b1f 321 PIRSF PIRSF005303 1 317 1.1E-77 T 13-09-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PMA3_RS26935 f1714b3e35feffc210c21c8d6ba68b1f 321 Gene3D G3DSA:3.30.1330.10 1 140 5.8E-43 T 13-09-2016 IPR016188 PurM-like, N-terminal domain PMA3_RS14710 71a0f712584d34abab2640186b440c39 301 Gene3D G3DSA:1.10.10.60 190 246 7.2E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14710 71a0f712584d34abab2640186b440c39 301 PANTHER PTHR11019:SF54 77 301 4.9E-25 T 13-09-2016 PMA3_RS14710 71a0f712584d34abab2640186b440c39 301 PANTHER PTHR11019 77 301 4.9E-25 T 13-09-2016 PMA3_RS14710 71a0f712584d34abab2640186b440c39 301 Pfam PF12833 Helix-turn-helix domain 216 298 1.4E-26 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS14710 71a0f712584d34abab2640186b440c39 301 SUPERFAMILY SSF46689 196 244 3.85E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14710 71a0f712584d34abab2640186b440c39 301 Gene3D G3DSA:1.10.10.60 247 295 1.2E-4 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14710 71a0f712584d34abab2640186b440c39 301 SMART SM00342 210 296 4.4E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS07840 501f3bc67fcd61a1c05935e2c23cdab6 209 PANTHER PTHR30086:SF4 1 207 4.3E-45 T 13-09-2016 PMA3_RS07840 501f3bc67fcd61a1c05935e2c23cdab6 209 Pfam PF01810 LysE type translocator 15 203 3.2E-27 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS07840 501f3bc67fcd61a1c05935e2c23cdab6 209 PANTHER PTHR30086 1 207 4.3E-45 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS07840 501f3bc67fcd61a1c05935e2c23cdab6 209 PIRSF PIRSF006324 1 209 2.9E-55 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS06135 f41ff963272b62cc754d03e371f0122b 310 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS06135 f41ff963272b62cc754d03e371f0122b 310 SMART SM00382 30 213 1.4E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS06135 f41ff963272b62cc754d03e371f0122b 310 PANTHER PTHR24220 6 302 4.0E-168 T 13-09-2016 PMA3_RS06135 f41ff963272b62cc754d03e371f0122b 310 SUPERFAMILY SSF52540 4 232 1.88E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06135 f41ff963272b62cc754d03e371f0122b 310 Pfam PF00005 ABC transporter 21 165 9.9E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS06135 f41ff963272b62cc754d03e371f0122b 310 PANTHER PTHR24220:SF305 6 302 4.0E-168 T 13-09-2016 PMA3_RS06135 f41ff963272b62cc754d03e371f0122b 310 Gene3D G3DSA:3.40.50.300 2 226 1.0E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 PANTHER PTHR21666:SF215 272 483 7.5E-116 T 13-09-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 SMART SM00062 42 267 2.6E-32 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 PANTHER PTHR21666 272 483 7.5E-116 T 13-09-2016 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 Gene3D G3DSA:3.40.190.10 225 257 1.2E-18 T 13-09-2016 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 Gene3D G3DSA:3.40.190.10 39 119 1.2E-18 T 13-09-2016 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 11 468 45.785 T 13-09-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 Pfam PF01464 Transglycosylase SLT domain 293 400 8.1E-23 T 13-09-2016 IPR008258 Transglycosylase SLT domain 1 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 SUPERFAMILY SSF53850 43 266 3.98E-39 T 13-09-2016 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 310 338 - T 13-09-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 SUPERFAMILY SSF53955 247 398 5.18E-35 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 SUPERFAMILY SSF53955 433 448 5.18E-35 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 Gene3D G3DSA:1.10.530.10 430 451 2.6E-42 T 13-09-2016 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 Gene3D G3DSA:1.10.530.10 258 395 2.6E-42 T 13-09-2016 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 Gene3D G3DSA:3.40.190.10 120 203 4.9E-13 T 13-09-2016 PMA3_RS04395 f46847106440cd9bb1afb911bc6e69e6 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 266 4.7E-34 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 SUPERFAMILY SSF52540 3 166 9.08E-31 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 PANTHER PTHR21087:SF0 2 168 2.9E-63 T 13-09-2016 PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 PANTHER PTHR21087 2 168 2.9E-63 T 13-09-2016 PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 ProSitePatterns PS01128 Shikimate kinase signature. 57 82 - T 13-09-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 PRINTS PR01100 Shikimate kinase family signature 74 83 4.9E-24 T 13-09-2016 PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 PRINTS PR01100 Shikimate kinase family signature 95 112 4.9E-24 T 13-09-2016 PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 PRINTS PR01100 Shikimate kinase family signature 56 64 4.9E-24 T 13-09-2016 PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 PRINTS PR01100 Shikimate kinase family signature 4 19 4.9E-24 T 13-09-2016 PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 PRINTS PR01100 Shikimate kinase family signature 28 41 4.9E-24 T 13-09-2016 PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 Hamap MF_00109 Shikimate kinase [aroK]. 1 167 29.638 T 13-09-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 Gene3D G3DSA:3.40.50.300 2 168 1.0E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01510 dc8d3e9326345331118c116f6d0f0df9 172 Pfam PF01202 Shikimate kinase 10 167 1.3E-53 T 13-09-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS11115 885123f3e6e057712c05a7f8a8989dfd 441 TIGRFAM TIGR00836 amt: ammonium transporter 36 439 2.7E-129 T 13-09-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PMA3_RS11115 885123f3e6e057712c05a7f8a8989dfd 441 SUPERFAMILY SSF111352 31 419 9.81E-121 T 13-09-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PMA3_RS11115 885123f3e6e057712c05a7f8a8989dfd 441 ProSitePatterns PS01219 Ammonium transporters signature. 197 222 - T 13-09-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PMA3_RS11115 885123f3e6e057712c05a7f8a8989dfd 441 PANTHER PTHR11730:SF17 11 440 1.0E-162 T 13-09-2016 PMA3_RS11115 885123f3e6e057712c05a7f8a8989dfd 441 PANTHER PTHR11730 11 440 1.0E-162 T 13-09-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PMA3_RS11115 885123f3e6e057712c05a7f8a8989dfd 441 Pfam PF00909 Ammonium Transporter Family 37 439 1.4E-110 T 13-09-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PMA3_RS11115 885123f3e6e057712c05a7f8a8989dfd 441 Gene3D G3DSA:1.10.3430.10 30 419 6.0E-132 T 13-09-2016 IPR029020 Ammonium/urea transporter PMA3_RS12335 10e5a83da1839a227f65c480beacdede 254 Gene3D G3DSA:3.30.450.40 84 252 3.5E-33 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS12335 10e5a83da1839a227f65c480beacdede 254 Pfam PF09339 IclR helix-turn-helix domain 13 60 4.2E-12 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS12335 10e5a83da1839a227f65c480beacdede 254 Pfam PF01614 Bacterial transcriptional regulator 128 249 2.4E-6 T 13-09-2016 IPR014757 Transcription regulator IclR, C-terminal PMA3_RS12335 10e5a83da1839a227f65c480beacdede 254 Gene3D G3DSA:1.10.10.10 10 83 2.0E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12335 10e5a83da1839a227f65c480beacdede 254 SMART SM00346 10 100 5.3E-4 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS12335 10e5a83da1839a227f65c480beacdede 254 SUPERFAMILY SSF55781 75 252 1.77E-31 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS12335 10e5a83da1839a227f65c480beacdede 254 SUPERFAMILY SSF46785 12 84 7.4E-12 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12335 10e5a83da1839a227f65c480beacdede 254 PANTHER PTHR30136 13 252 9.1E-31 T 13-09-2016 PMA3_RS24570 36fa657cc4e86be0d0a14283dc9480eb 258 SUPERFAMILY SSF53850 1 255 2.12E-69 T 13-09-2016 PMA3_RS24570 36fa657cc4e86be0d0a14283dc9480eb 258 PANTHER PTHR18966 24 251 1.9E-63 T 13-09-2016 PMA3_RS24570 36fa657cc4e86be0d0a14283dc9480eb 258 SMART SM00062 26 254 2.7E-67 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS24570 36fa657cc4e86be0d0a14283dc9480eb 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 252 8.1E-62 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS24570 36fa657cc4e86be0d0a14283dc9480eb 258 Gene3D G3DSA:3.40.190.10 24 112 4.1E-47 T 13-09-2016 PMA3_RS24570 36fa657cc4e86be0d0a14283dc9480eb 258 Gene3D G3DSA:3.40.190.10 213 256 4.1E-47 T 13-09-2016 PMA3_RS24570 36fa657cc4e86be0d0a14283dc9480eb 258 Gene3D G3DSA:3.40.190.10 119 210 1.0E-25 T 13-09-2016 PMA3_RS24570 36fa657cc4e86be0d0a14283dc9480eb 258 PANTHER PTHR18966:SF152 24 251 1.9E-63 T 13-09-2016 PMA3_RS24570 36fa657cc4e86be0d0a14283dc9480eb 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 251 6.7E-83 T 13-09-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 PMA3_RS13955 9ff38f55cc42ad0f96766c03b56af2fa 556 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 66 473 3.6E-64 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS13955 9ff38f55cc42ad0f96766c03b56af2fa 556 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 181 206 - T 13-09-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PMA3_RS13955 9ff38f55cc42ad0f96766c03b56af2fa 556 PANTHER PTHR11819 35 545 5.7E-240 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS13955 9ff38f55cc42ad0f96766c03b56af2fa 556 PANTHER PTHR11819:SF13 35 545 5.7E-240 T 13-09-2016 PMA3_RS13955 9ff38f55cc42ad0f96766c03b56af2fa 556 Pfam PF00474 Sodium:solute symporter family 66 475 3.0E-108 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS18805 45cff1c941972d993d6b9f45b190e1fd 380 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 355 6.7E-74 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS18805 45cff1c941972d993d6b9f45b190e1fd 380 PANTHER PTHR22893:SF14 5 130 9.5E-143 T 13-09-2016 PMA3_RS18805 45cff1c941972d993d6b9f45b190e1fd 380 PANTHER PTHR22893:SF14 148 375 9.5E-143 T 13-09-2016 PMA3_RS18805 45cff1c941972d993d6b9f45b190e1fd 380 Gene3D G3DSA:3.20.20.70 5 375 1.6E-115 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS18805 45cff1c941972d993d6b9f45b190e1fd 380 PANTHER PTHR22893 148 375 9.5E-143 T 13-09-2016 PMA3_RS18805 45cff1c941972d993d6b9f45b190e1fd 380 PANTHER PTHR22893 5 130 9.5E-143 T 13-09-2016 PMA3_RS18805 45cff1c941972d993d6b9f45b190e1fd 380 SUPERFAMILY SSF51395 1 376 2.65E-107 T 13-09-2016 PMA3_RS02120 1508c08865a3e74c07556fb1757fd750 255 SMART SM00967 6 81 6.0E-21 T 13-09-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 PMA3_RS02120 1508c08865a3e74c07556fb1757fd750 255 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 244 2.2E-80 T 13-09-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 PMA3_RS02120 1508c08865a3e74c07556fb1757fd750 255 SUPERFAMILY SSF75217 70 245 1.44E-48 T 13-09-2016 IPR029028 Alpha/beta knot methyltransferases PMA3_RS02120 1508c08865a3e74c07556fb1757fd750 255 PANTHER PTHR12029 3 244 3.2E-80 T 13-09-2016 PMA3_RS02120 1508c08865a3e74c07556fb1757fd750 255 Gene3D G3DSA:3.30.1330.30 1 77 1.6E-25 T 13-09-2016 IPR029064 50S ribosomal protein L30e-like PMA3_RS02120 1508c08865a3e74c07556fb1757fd750 255 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 80 5.0E-21 T 13-09-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 PMA3_RS02120 1508c08865a3e74c07556fb1757fd750 255 Pfam PF00588 SpoU rRNA Methylase family 98 238 5.3E-39 T 13-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PMA3_RS02120 1508c08865a3e74c07556fb1757fd750 255 Gene3D G3DSA:3.40.1280.10 93 247 8.4E-56 T 13-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PMA3_RS02120 1508c08865a3e74c07556fb1757fd750 255 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 245 42.993 T 13-09-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB PMA3_RS02120 1508c08865a3e74c07556fb1757fd750 255 SUPERFAMILY SSF55315 2 77 3.53E-18 T 13-09-2016 IPR029064 50S ribosomal protein L30e-like PMA3_RS28355 12e56535194fa159cdf873f001a700c1 283 PANTHER PTHR22855:SF21 1 232 5.1E-79 T 13-09-2016 PMA3_RS28355 12e56535194fa159cdf873f001a700c1 283 Pfam PF01039 Carboxyl transferase domain 17 246 1.8E-15 T 13-09-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS28355 12e56535194fa159cdf873f001a700c1 283 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 11 281 9.9E-121 T 13-09-2016 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 PMA3_RS28355 12e56535194fa159cdf873f001a700c1 283 SUPERFAMILY SSF52096 9 232 5.33E-37 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS28355 12e56535194fa159cdf873f001a700c1 283 PANTHER PTHR22855 1 232 5.1E-79 T 13-09-2016 PMA3_RS28355 12e56535194fa159cdf873f001a700c1 283 Gene3D G3DSA:3.90.226.10 14 238 4.5E-34 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS22025 459b17eec41f5b4459475491045d574a 198 PANTHER PTHR21392 3 195 2.4E-59 T 13-09-2016 PMA3_RS22025 459b17eec41f5b4459475491045d574a 198 SMART SM01144 2 187 1.4E-72 T 13-09-2016 IPR005636 DTW PMA3_RS22025 459b17eec41f5b4459475491045d574a 198 Pfam PF03942 DTW domain 5 182 6.5E-50 T 13-09-2016 IPR005636 DTW PMA3_RS05510 0f5d08806c298bac24605eed54ff0469 115 Pfam PF09634 Protein of unknown function (DUF2025) 1 105 2.1E-53 T 13-09-2016 IPR023117 PA1123-like domain PMA3_RS05510 0f5d08806c298bac24605eed54ff0469 115 Gene3D G3DSA:3.90.1650.10 1 105 2.0E-56 T 13-09-2016 IPR023117 PA1123-like domain PMA3_RS05510 0f5d08806c298bac24605eed54ff0469 115 SUPERFAMILY SSF160477 1 105 1.28E-53 T 13-09-2016 IPR023117 PA1123-like domain PMA3_RS28455 a4496eb769c229eadda13138ce27cd4e 423 PANTHER PTHR11647:SF70 2 422 3.6E-139 T 13-09-2016 PMA3_RS28455 a4496eb769c229eadda13138ce27cd4e 423 SUPERFAMILY SSF51556 56 368 1.54E-85 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS28455 a4496eb769c229eadda13138ce27cd4e 423 Gene3D G3DSA:3.20.20.140 70 386 3.8E-85 T 13-09-2016 PMA3_RS28455 a4496eb769c229eadda13138ce27cd4e 423 SUPERFAMILY SSF51338 367 421 1.92E-21 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS28455 a4496eb769c229eadda13138ce27cd4e 423 SUPERFAMILY SSF51338 2 55 1.92E-21 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS28455 a4496eb769c229eadda13138ce27cd4e 423 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 420 1.2E-85 T 13-09-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS28455 a4496eb769c229eadda13138ce27cd4e 423 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 423 31.678 T 13-09-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS28455 a4496eb769c229eadda13138ce27cd4e 423 Pfam PF01979 Amidohydrolase family 192 419 4.0E-13 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS28455 a4496eb769c229eadda13138ce27cd4e 423 Gene3D G3DSA:2.30.40.10 3 69 3.7E-11 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS28455 a4496eb769c229eadda13138ce27cd4e 423 PANTHER PTHR11647 2 422 3.6E-139 T 13-09-2016 PMA3_RS16625 25e0845bb2878fb536a7dab094bdaded 463 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 230 237 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS16625 25e0845bb2878fb536a7dab094bdaded 463 Gene3D G3DSA:3.40.605.10 3 244 1.2E-61 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16625 25e0845bb2878fb536a7dab094bdaded 463 Pfam PF00171 Aldehyde dehydrogenase family 3 456 1.8E-120 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16625 25e0845bb2878fb536a7dab094bdaded 463 Gene3D G3DSA:3.40.309.10 245 431 6.6E-60 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS16625 25e0845bb2878fb536a7dab094bdaded 463 PANTHER PTHR11699 1 460 6.1E-223 T 13-09-2016 PMA3_RS16625 25e0845bb2878fb536a7dab094bdaded 463 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 258 269 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS16625 25e0845bb2878fb536a7dab094bdaded 463 PANTHER PTHR11699:SF65 1 460 6.1E-223 T 13-09-2016 PMA3_RS16625 25e0845bb2878fb536a7dab094bdaded 463 SUPERFAMILY SSF53720 3 460 1.57E-130 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS04565 6ee7d62eb6c57d28ad6168e4713b56c5 383 PANTHER PTHR30222 1 333 2.0E-69 T 13-09-2016 PMA3_RS04565 6ee7d62eb6c57d28ad6168e4713b56c5 383 SUPERFAMILY SSF53850 35 359 1.5E-60 T 13-09-2016 PMA3_RS04565 6ee7d62eb6c57d28ad6168e4713b56c5 383 Gene3D G3DSA:3.40.190.10 148 301 3.3E-29 T 13-09-2016 PMA3_RS04565 6ee7d62eb6c57d28ad6168e4713b56c5 383 PANTHER PTHR30222:SF5 1 333 2.0E-69 T 13-09-2016 PMA3_RS04565 6ee7d62eb6c57d28ad6168e4713b56c5 383 Gene3D G3DSA:3.40.190.10 35 147 4.9E-31 T 13-09-2016 PMA3_RS04565 6ee7d62eb6c57d28ad6168e4713b56c5 383 Gene3D G3DSA:3.40.190.10 302 332 4.9E-31 T 13-09-2016 PMA3_RS04565 6ee7d62eb6c57d28ad6168e4713b56c5 383 Pfam PF13416 Bacterial extracellular solute-binding protein 59 332 1.7E-25 T 13-09-2016 PMA3_RS04565 6ee7d62eb6c57d28ad6168e4713b56c5 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 64 85 1.8E-8 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS04565 6ee7d62eb6c57d28ad6168e4713b56c5 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 278 297 1.8E-8 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS04565 6ee7d62eb6c57d28ad6168e4713b56c5 383 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 138 154 1.8E-8 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 SUPERFAMILY SSF160467 2 84 2.22E-12 T 13-09-2016 PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 Gene3D G3DSA:2.40.100.10 404 517 4.2E-14 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 Gene3D G3DSA:2.40.100.10 80 200 1.4E-44 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 SMART SM00796 1 190 2.3E-94 T 13-09-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 PANTHER PTHR34698 1 198 2.8E-69 T 13-09-2016 PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 SUPERFAMILY SSF50891 404 517 2.69E-17 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 Gene3D G3DSA:3.30.1360.40 2 66 2.9E-9 T 13-09-2016 IPR024946 Arginine repressor C-terminal-like domain PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 226 516 5.6E-73 T 13-09-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 SUPERFAMILY SSF50891 80 200 4.17E-37 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 Pfam PF02682 Allophanate hydrolase subunit 1 2 190 5.9E-63 T 13-09-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 PANTHER PTHR34698:SF2 1 198 2.8E-69 T 13-09-2016 PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 Pfam PF02626 Allophanate hydrolase subunit 2 249 514 4.2E-80 T 13-09-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PMA3_RS18540 0dc987b7e3c8f4d61d7f22da85dcd2cb 539 SMART SM00797 247 532 3.7E-114 T 13-09-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PMA3_RS18465 4aaa0354ef6579867a2ae7b3276340fb 320 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 34 313 3.3E-53 T 13-09-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PMA3_RS18465 4aaa0354ef6579867a2ae7b3276340fb 320 SUPERFAMILY SSF51197 31 318 1.33E-75 T 13-09-2016 PMA3_RS18465 4aaa0354ef6579867a2ae7b3276340fb 320 PANTHER PTHR30468 18 316 1.7E-60 T 13-09-2016 PMA3_RS18465 4aaa0354ef6579867a2ae7b3276340fb 320 Gene3D G3DSA:3.60.130.10 22 317 2.5E-78 T 13-09-2016 PMA3_RS11425 a4b042e3c4f6271d69bb695f7d1693ec 227 PANTHER PTHR32305:SF6 4 225 1.3E-26 T 13-09-2016 PMA3_RS11425 a4b042e3c4f6271d69bb695f7d1693ec 227 Pfam PF05593 RHS Repeat 50 85 1.1E-5 T 13-09-2016 IPR031325 RHS repeat PMA3_RS11425 a4b042e3c4f6271d69bb695f7d1693ec 227 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 199 226 0.0031 T 13-09-2016 IPR006530 YD repeat PMA3_RS11425 a4b042e3c4f6271d69bb695f7d1693ec 227 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 50 89 1.9E-8 T 13-09-2016 IPR006530 YD repeat PMA3_RS11425 a4b042e3c4f6271d69bb695f7d1693ec 227 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 104 132 9.1E-5 T 13-09-2016 IPR006530 YD repeat PMA3_RS11425 a4b042e3c4f6271d69bb695f7d1693ec 227 PANTHER PTHR32305 4 225 1.3E-26 T 13-09-2016 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 Gene3D G3DSA:3.40.50.2300 528 646 4.6E-31 T 13-09-2016 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 SUPERFAMILY SSF47384 276 347 1.96E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 Pfam PF00512 His Kinase A (phospho-acceptor) domain 282 347 1.7E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 SMART SM00448 5 119 1.1E-30 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 SMART SM00448 528 640 1.5E-21 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 PANTHER PTHR24423 266 648 6.4E-147 T 13-09-2016 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 PANTHER PTHR24423 135 240 6.4E-147 T 13-09-2016 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 SMART SM00388 282 350 1.3E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 Gene3D G3DSA:3.30.565.10 350 507 3.4E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 SUPERFAMILY SSF55785 125 240 4.38E-11 T 13-09-2016 IPR000014 PAS domain PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 507 9.4E-15 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 SUPERFAMILY SSF55874 341 507 2.62E-35 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 Gene3D G3DSA:3.40.50.2300 2 129 4.6E-32 T 13-09-2016 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 Gene3D G3DSA:1.10.287.130 278 346 1.5E-4 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 Gene3D G3DSA:3.30.450.20 130 241 1.9E-12 T 13-09-2016 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 SUPERFAMILY SSF52172 529 645 1.1E-27 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 2.1E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 2.1E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 2.1E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 2.1E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 SUPERFAMILY SSF52172 4 140 4.55E-34 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 PANTHER PTHR24423:SF438 266 648 6.4E-147 T 13-09-2016 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 PANTHER PTHR24423:SF438 135 240 6.4E-147 T 13-09-2016 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 SMART SM00387 391 509 5.0E-24 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 Pfam PF00072 Response regulator receiver domain 530 640 6.1E-18 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 Pfam PF00072 Response regulator receiver domain 8 119 1.2E-20 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 PANTHER PTHR24423 12 28 6.4E-147 T 13-09-2016 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 PANTHER PTHR24423:SF438 12 28 6.4E-147 T 13-09-2016 PMA3_RS12125 5e9e04568b219026d8353dcd78018cc7 648 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 133 247 2.5E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PANTHER PTHR30555 225 751 0.0 T 13-09-2016 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 ProSitePatterns PS00436 Peroxidases active site signature. 83 94 - T 13-09-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 Gene3D G3DSA:1.10.520.10 729 750 3.9E-65 T 13-09-2016 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 Gene3D G3DSA:1.10.520.10 255 267 2.7E-74 T 13-09-2016 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 Gene3D G3DSA:1.10.520.10 450 603 3.9E-65 T 13-09-2016 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 Gene3D G3DSA:1.10.520.10 40 194 2.7E-74 T 13-09-2016 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PRINTS PR00458 Haem peroxidase superfamily signature 143 160 6.8E-14 T 13-09-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PRINTS PR00458 Haem peroxidase superfamily signature 161 173 6.8E-14 T 13-09-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PRINTS PR00458 Haem peroxidase superfamily signature 334 349 6.8E-14 T 13-09-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PRINTS PR00458 Haem peroxidase superfamily signature 83 97 6.8E-14 T 13-09-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 SUPERFAMILY SSF48113 448 750 1.02E-114 T 13-09-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 5 750 0.0 T 13-09-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 SUPERFAMILY SSF48113 15 198 9.76E-154 T 13-09-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 SUPERFAMILY SSF48113 227 447 9.76E-154 T 13-09-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 Gene3D G3DSA:1.10.420.10 604 725 4.2E-46 T 13-09-2016 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PANTHER PTHR30555 1 197 0.0 T 13-09-2016 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 Pfam PF00141 Peroxidase 70 413 6.5E-48 T 13-09-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 Pfam PF00141 Peroxidase 420 725 1.7E-36 T 13-09-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 60 85 5.6E-56 T 13-09-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 498 524 5.6E-56 T 13-09-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 45 58 5.6E-56 T 13-09-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 19 41 5.6E-56 T 13-09-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 283 306 5.6E-56 T 13-09-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 Hamap MF_01961 Catalase-peroxidase [katG]. 2 751 42.714 T 13-09-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 275 285 - T 13-09-2016 IPR019793 Peroxidases heam-ligand binding site PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PANTHER PTHR30555:SF0 225 751 0.0 T 13-09-2016 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 PANTHER PTHR30555:SF0 1 197 0.0 T 13-09-2016 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 Gene3D G3DSA:1.10.420.10 326 425 5.3E-46 T 13-09-2016 PMA3_RS17065 ffdb1deb27c9328d8af67746bf6d006c 751 Gene3D G3DSA:1.10.420.10 268 290 5.3E-46 T 13-09-2016 PMA3_RS11035 7823239ca5abc61cee5c47af06e1d8fb 189 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 143 8.1E-27 T 13-09-2016 IPR000944 Transcription regulator Rrf2-type PMA3_RS11035 7823239ca5abc61cee5c47af06e1d8fb 189 SUPERFAMILY SSF46785 5 146 2.51E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11035 7823239ca5abc61cee5c47af06e1d8fb 189 PANTHER PTHR33221 4 165 2.9E-59 T 13-09-2016 PMA3_RS11035 7823239ca5abc61cee5c47af06e1d8fb 189 Pfam PF02082 Transcriptional regulator 4 85 8.4E-22 T 13-09-2016 IPR000944 Transcription regulator Rrf2-type PMA3_RS11035 7823239ca5abc61cee5c47af06e1d8fb 189 Gene3D G3DSA:1.10.10.10 5 151 1.1E-34 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11035 7823239ca5abc61cee5c47af06e1d8fb 189 PANTHER PTHR33221:SF6 4 165 2.9E-59 T 13-09-2016 PMA3_RS12885 737926db26a410a0ebb3481dfb2dbdac 321 PANTHER PTHR23088 236 298 5.0E-64 T 13-09-2016 PMA3_RS12885 737926db26a410a0ebb3481dfb2dbdac 321 PANTHER PTHR23088 1 218 5.0E-64 T 13-09-2016 PMA3_RS12885 737926db26a410a0ebb3481dfb2dbdac 321 ProSitePatterns PS00921 Nitrilases / cyanide hydratase active site signature. 156 169 - T 13-09-2016 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 PMA3_RS12885 737926db26a410a0ebb3481dfb2dbdac 321 Pfam PF00795 Carbon-nitrogen hydrolase 5 275 1.7E-46 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS12885 737926db26a410a0ebb3481dfb2dbdac 321 Gene3D G3DSA:3.60.110.10 3 297 8.7E-58 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS12885 737926db26a410a0ebb3481dfb2dbdac 321 SUPERFAMILY SSF56317 1 298 4.58E-69 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS06010 352dbde6d34136b120463205860079a5 555 Gene3D G3DSA:2.30.38.10 358 418 2.3E-16 T 13-09-2016 PMA3_RS06010 352dbde6d34136b120463205860079a5 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS06010 352dbde6d34136b120463205860079a5 555 PANTHER PTHR24096:SF249 8 550 4.3E-230 T 13-09-2016 PMA3_RS06010 352dbde6d34136b120463205860079a5 555 Gene3D G3DSA:3.40.50.980 177 357 2.7E-31 T 13-09-2016 PMA3_RS06010 352dbde6d34136b120463205860079a5 555 Gene3D G3DSA:3.30.300.30 429 535 6.9E-5 T 13-09-2016 PMA3_RS06010 352dbde6d34136b120463205860079a5 555 SUPERFAMILY SSF56801 7 544 1.15E-117 T 13-09-2016 PMA3_RS06010 352dbde6d34136b120463205860079a5 555 PANTHER PTHR24096 8 550 4.3E-230 T 13-09-2016 PMA3_RS06010 352dbde6d34136b120463205860079a5 555 Gene3D G3DSA:3.40.50.980 10 176 1.3E-34 T 13-09-2016 PMA3_RS06010 352dbde6d34136b120463205860079a5 555 Pfam PF00501 AMP-binding enzyme 14 428 8.9E-93 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS16970 2817a051439f9fbf4029635ffd6a556d 424 SMART SM00922 171 265 2.7E-20 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS16970 2817a051439f9fbf4029635ffd6a556d 424 Pfam PF13378 Enolase C-terminal domain-like 174 387 3.9E-50 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS16970 2817a051439f9fbf4029635ffd6a556d 424 Gene3D G3DSA:3.20.20.120 117 380 1.5E-89 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS16970 2817a051439f9fbf4029635ffd6a556d 424 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 33 135 2.3E-9 T 13-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PMA3_RS16970 2817a051439f9fbf4029635ffd6a556d 424 SUPERFAMILY SSF51604 135 422 1.57E-69 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS16970 2817a051439f9fbf4029635ffd6a556d 424 SUPERFAMILY SSF54826 2 135 1.08E-24 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS16970 2817a051439f9fbf4029635ffd6a556d 424 Gene3D G3DSA:3.30.390.10 2 116 2.6E-15 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS16970 2817a051439f9fbf4029635ffd6a556d 424 PANTHER PTHR13794:SF56 8 413 4.8E-156 T 13-09-2016 PMA3_RS16970 2817a051439f9fbf4029635ffd6a556d 424 PANTHER PTHR13794 8 413 4.8E-156 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS29550 98f48aac50ed5c595f6793bfb616eacb 287 PANTHER PTHR30636 1 287 7.0E-97 T 13-09-2016 PMA3_RS29550 98f48aac50ed5c595f6793bfb616eacb 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 3.3E-38 T 13-09-2016 IPR013527 YicC-like, N-terminal PMA3_RS29550 98f48aac50ed5c595f6793bfb616eacb 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 3.1E-92 T 13-09-2016 IPR005229 Conserved hypothetical protein CHP00255 PMA3_RS29550 98f48aac50ed5c595f6793bfb616eacb 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.6E-34 T 13-09-2016 IPR013551 Domain of unknown function DUF1732 PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.3E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 6.3E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.3E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.3E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.3E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 6.3E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 SUPERFAMILY SSF51735 9 253 1.8E-77 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 4.1E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 4.1E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 4.1E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 192 0.0058 T 13-09-2016 PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 251 2.1E-59 T 13-09-2016 PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 Gene3D G3DSA:3.40.50.720 6 253 8.1E-79 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PANTHER PTHR24322 161 192 1.8E-53 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18840 8aae92f9112d79b56ab6728434798bda 254 PANTHER PTHR24322 15 145 1.8E-53 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS25940 84fe45a74c510d83c935839951facf99 306 SUPERFAMILY SSF46785 16 101 1.31E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25940 84fe45a74c510d83c935839951facf99 306 Pfam PF03466 LysR substrate binding domain 101 304 3.2E-26 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS25940 84fe45a74c510d83c935839951facf99 306 PANTHER PTHR30126 15 302 2.8E-79 T 13-09-2016 PMA3_RS25940 84fe45a74c510d83c935839951facf99 306 Gene3D G3DSA:3.40.190.10 102 205 2.3E-15 T 13-09-2016 PMA3_RS25940 84fe45a74c510d83c935839951facf99 306 PANTHER PTHR30126:SF16 15 302 2.8E-79 T 13-09-2016 PMA3_RS25940 84fe45a74c510d83c935839951facf99 306 Gene3D G3DSA:1.10.10.10 15 96 2.6E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25940 84fe45a74c510d83c935839951facf99 306 SUPERFAMILY SSF53850 102 304 2.71E-26 T 13-09-2016 PMA3_RS25940 84fe45a74c510d83c935839951facf99 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 76 2.1E-15 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS30360 8358cb8a9ecab31c16cafb56f2b3b2fb 213 PANTHER PTHR11649 16 210 3.4E-51 T 13-09-2016 PMA3_RS30360 8358cb8a9ecab31c16cafb56f2b3b2fb 213 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 15 198 9.4E-69 T 13-09-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 PMA3_RS30360 8358cb8a9ecab31c16cafb56f2b3b2fb 213 Gene3D G3DSA:3.40.50.300 14 200 9.1E-38 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30360 8358cb8a9ecab31c16cafb56f2b3b2fb 213 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 19 202 26.106 T 13-09-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 PMA3_RS30360 8358cb8a9ecab31c16cafb56f2b3b2fb 213 Pfam PF01926 50S ribosome-binding GTPase 33 150 1.6E-16 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS30360 8358cb8a9ecab31c16cafb56f2b3b2fb 213 SUPERFAMILY SSF52540 23 202 7.96E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 Pfam PF01225 Mur ligase family, catalytic domain 25 94 1.5E-10 T 13-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 Gene3D G3DSA:3.40.1390.10 5 82 2.5E-23 T 13-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 447 6.3E-143 T 13-09-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 PANTHER PTHR23135:SF3 13 447 9.8E-155 T 13-09-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 SUPERFAMILY SSF63418 4 97 1.44E-24 T 13-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 PANTHER PTHR23135 13 447 9.8E-155 T 13-09-2016 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 Gene3D G3DSA:3.90.190.20 315 448 4.2E-42 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 448 32.906 T 13-09-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 Pfam PF08245 Mur ligase middle domain 107 296 1.3E-47 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 Gene3D G3DSA:3.40.1190.10 84 313 4.8E-70 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 SUPERFAMILY SSF53623 103 314 2.49E-54 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 383 2.7E-11 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04125 04cc93046855fa2afb8e5572a75c172b 455 SUPERFAMILY SSF53244 316 447 4.35E-35 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04435 cf7b89e4a31bc6f0e730e45110c02e3c 393 Gene3D G3DSA:3.30.470.20 199 388 9.4E-72 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS04435 cf7b89e4a31bc6f0e730e45110c02e3c 393 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 392 52.974 T 13-09-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 PMA3_RS04435 cf7b89e4a31bc6f0e730e45110c02e3c 393 SUPERFAMILY SSF56059 120 385 1.08E-58 T 13-09-2016 PMA3_RS04435 cf7b89e4a31bc6f0e730e45110c02e3c 393 PANTHER PTHR11609:SF7 1 382 7.5E-223 T 13-09-2016 PMA3_RS04435 cf7b89e4a31bc6f0e730e45110c02e3c 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 1.1E-192 T 13-09-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 PMA3_RS04435 cf7b89e4a31bc6f0e730e45110c02e3c 393 Gene3D G3DSA:3.40.50.20 5 120 3.2E-39 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS04435 cf7b89e4a31bc6f0e730e45110c02e3c 393 Pfam PF02222 ATP-grasp domain 123 295 5.9E-54 T 13-09-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 PMA3_RS04435 cf7b89e4a31bc6f0e730e45110c02e3c 393 Gene3D G3DSA:3.30.1490.20 123 198 1.5E-26 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS04435 cf7b89e4a31bc6f0e730e45110c02e3c 393 SUPERFAMILY SSF52440 3 112 1.24E-34 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS04435 cf7b89e4a31bc6f0e730e45110c02e3c 393 PANTHER PTHR11609 1 382 7.5E-223 T 13-09-2016 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 PANTHER PTHR32089 23 712 2.6E-198 T 13-09-2016 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 SUPERFAMILY SSF58104 403 712 2.09E-78 T 13-09-2016 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 SMART SM00304 381 435 5.3E-9 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 Pfam PF00672 HAMP domain 362 431 9.6E-14 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 SMART SM00283 450 711 2.7E-75 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 PANTHER PTHR32089:SF34 23 712 2.6E-198 T 13-09-2016 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 498 710 1.9E-49 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 Gene3D G3DSA:3.30.450.20 183 238 3.5E-9 T 13-09-2016 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 Gene3D G3DSA:3.30.450.20 101 146 3.5E-9 T 13-09-2016 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 Pfam PF02743 Cache domain 51 332 1.5E-20 T 13-09-2016 IPR033479 Double Cache domain 1 PMA3_RS23160 1c339e8c61f476965a7ff88bebe2087e 712 Gene3D G3DSA:1.10.287.950 467 681 3.5E-57 T 13-09-2016 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 43 979 19.936 T 13-09-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 46 294 4.4E-88 T 13-09-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 574 827 8.9E-90 T 13-09-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 SUPERFAMILY SSF81301 37 304 1.24E-84 T 13-09-2016 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 SUPERFAMILY SSF81301 546 833 3.2E-84 T 13-09-2016 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 PANTHER PTHR30621 40 979 0.0 T 13-09-2016 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 Pfam PF08335 GlnD PII-uridylyltransferase 315 454 3.5E-44 T 13-09-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 Pfam PF08335 GlnD PII-uridylyltransferase 849 947 1.3E-11 T 13-09-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 Gene3D G3DSA:3.30.460.10 660 832 1.0E-59 T 13-09-2016 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 Gene3D G3DSA:3.30.460.10 130 303 3.5E-62 T 13-09-2016 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 SUPERFAMILY SSF81593 837 976 2.2E-31 T 13-09-2016 PMA3_RS01775 b8ec4591189ef08b22cc541e239a9dc7 979 SUPERFAMILY SSF81593 305 454 7.3E-43 T 13-09-2016 PMA3_RS06100 d3d160090c4518c692fa3bcd607ae2f8 256 Gene3D G3DSA:2.60.120.620 159 241 1.2E-6 T 13-09-2016 PMA3_RS06100 d3d160090c4518c692fa3bcd607ae2f8 256 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 132 243 4.6E-10 T 13-09-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 Gene3D G3DSA:3.40.50.800 330 424 4.0E-28 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 Pfam PF03129 Anticodon binding domain 348 420 5.7E-6 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 PANTHER PTHR11476 3 429 2.8E-222 T 13-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 SUPERFAMILY SSF52954 330 424 1.16E-19 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 PIRSF PIRSF001549 2 425 4.5E-116 T 13-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 PANTHER PTHR11476:SF9 3 429 2.8E-222 T 13-09-2016 PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 414 1.8E-154 T 13-09-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 424 32.992 T 13-09-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 SUPERFAMILY SSF55681 6 324 3.98E-103 T 13-09-2016 PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 Pfam PF13393 Histidyl-tRNA synthetase 10 313 5.4E-44 T 13-09-2016 PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 Gene3D G3DSA:3.30.930.10 222 324 7.4E-96 T 13-09-2016 PMA3_RS24210 51426723edc08c3887a8a76584e2821d 429 Gene3D G3DSA:3.30.930.10 5 186 7.4E-96 T 13-09-2016 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 PIRSF PIRSF001400 1 428 1.0E-191 T 13-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 Pfam PF03952 Enolase, N-terminal domain 4 134 3.3E-56 T 13-09-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 Hamap MF_00318 Enolase [eno]. 2 415 44.301 T 13-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 2.3E-204 T 13-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 Gene3D G3DSA:3.20.20.120 128 428 5.3E-138 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 13-09-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 SMART SM01192 143 429 1.9E-222 T 13-09-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 SMART SM01193 4 134 3.3E-89 T 13-09-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 SUPERFAMILY SSF51604 144 427 3.14E-131 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 PRINTS PR00148 Enolase signature 367 384 5.9E-45 T 13-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 PRINTS PR00148 Enolase signature 107 123 5.9E-45 T 13-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 PRINTS PR00148 Enolase signature 37 51 5.9E-45 T 13-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 PRINTS PR00148 Enolase signature 165 178 5.9E-45 T 13-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 PRINTS PR00148 Enolase signature 338 352 5.9E-45 T 13-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 PRINTS PR00148 Enolase signature 315 326 5.9E-45 T 13-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 Gene3D G3DSA:3.30.390.10 3 125 1.4E-53 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 PANTHER PTHR11902 1 429 9.3E-272 T 13-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 SUPERFAMILY SSF54826 3 138 7.95E-55 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS04925 490c00efbae01ef433ca2b0f06ca4d1c 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 427 3.4E-138 T 13-09-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PMA3_RS03030 524606c6857015740341d419cf3869d4 374 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 13-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PMA3_RS03030 524606c6857015740341d419cf3869d4 374 Gene3D G3DSA:3.40.50.150 220 345 1.9E-20 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS03030 524606c6857015740341d419cf3869d4 374 PANTHER PTHR18895 81 374 2.7E-120 T 13-09-2016 PMA3_RS03030 524606c6857015740341d419cf3869d4 374 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 43.19 T 13-09-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS03030 524606c6857015740341d419cf3869d4 374 PIRSF PIRSF037565 1 374 4.4E-140 T 13-09-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS03030 524606c6857015740341d419cf3869d4 374 Pfam PF05175 Methyltransferase small domain 201 371 1.9E-49 T 13-09-2016 IPR007848 Methyltransferase small domain GO:0008168 PMA3_RS03030 524606c6857015740341d419cf3869d4 374 PANTHER PTHR18895:SF6 81 374 2.7E-120 T 13-09-2016 PMA3_RS03030 524606c6857015740341d419cf3869d4 374 SUPERFAMILY SSF53335 203 349 1.66E-25 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS29480 72972d241da1baa3980ae6c170f16988 72 Pfam PF11720 Peptidase inhibitor I78 family 8 72 1.6E-7 T 13-09-2016 IPR021719 Proteinase inhibitor I78 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 PANTHER PTHR11615 732 901 0.0 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 651 1.9E-218 T 13-09-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 Pfam PF00384 Molybdopterin oxidoreductase 555 633 3.8E-9 T 13-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 SMART SM00926 221 275 1.4E-10 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 13-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 1.6E-10 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 PANTHER PTHR11615 492 685 0.0 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 PANTHER PTHR11615 360 426 0.0 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 13-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 Gene3D G3DSA:3.40.50.740 500 682 8.6E-34 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 Gene3D G3DSA:3.40.50.740 289 336 8.6E-34 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 127 6.6E-15 T 13-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 Gene3D G3DSA:3.10.20.30 3 84 6.9E-8 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 SMART SM00929 88 128 2.6E-19 T 13-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 SUPERFAMILY SSF53706 219 685 2.36E-82 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 Gene3D G3DSA:2.20.25.90 228 275 8.7E-14 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 PANTHER PTHR11615:SF134 492 685 0.0 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 PANTHER PTHR11615:SF134 360 426 0.0 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 3.2E-11 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 Gene3D G3DSA:3.30.70.20 148 157 5.1E-5 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 Gene3D G3DSA:3.30.70.20 198 227 5.1E-5 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 SUPERFAMILY SSF54862 81 213 6.28E-33 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 PANTHER PTHR11615 3 316 0.0 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 SUPERFAMILY SSF54292 1 77 1.42E-18 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 PANTHER PTHR11615:SF134 732 901 0.0 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 PANTHER PTHR11615:SF134 3 316 0.0 T 13-09-2016 PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 SUPERFAMILY SSF50692 811 886 3.11E-5 T 13-09-2016 IPR009010 Aspartate decarboxylase-like domain PMA3_RS19695 635c99a0e3a77c4fd3812219b8e82569 904 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 13-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 PMA3_RS22295 d444e927113edbbfeea3bc913acad77a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.8E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS22295 d444e927113edbbfeea3bc913acad77a 304 PANTHER PTHR30126:SF10 1 304 8.3E-145 T 13-09-2016 PMA3_RS22295 d444e927113edbbfeea3bc913acad77a 304 Pfam PF03466 LysR substrate binding domain 87 274 8.9E-34 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS22295 d444e927113edbbfeea3bc913acad77a 304 SUPERFAMILY SSF53850 89 293 2.95E-34 T 13-09-2016 PMA3_RS22295 d444e927113edbbfeea3bc913acad77a 304 Gene3D G3DSA:3.40.190.10 190 262 5.3E-10 T 13-09-2016 PMA3_RS22295 d444e927113edbbfeea3bc913acad77a 304 SUPERFAMILY SSF46785 1 110 2.09E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22295 d444e927113edbbfeea3bc913acad77a 304 Gene3D G3DSA:1.10.10.10 1 82 1.7E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22295 d444e927113edbbfeea3bc913acad77a 304 Gene3D G3DSA:3.40.190.10 88 189 1.0E-18 T 13-09-2016 PMA3_RS22295 d444e927113edbbfeea3bc913acad77a 304 PANTHER PTHR30126 1 304 8.3E-145 T 13-09-2016 PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 Pfam PF03466 LysR substrate binding domain 102 316 5.6E-21 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 75 5.0E-20 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 Gene3D G3DSA:3.40.190.10 105 188 3.4E-18 T 13-09-2016 PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 PANTHER PTHR30537 9 317 1.1E-61 T 13-09-2016 PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 SUPERFAMILY SSF46785 12 95 6.1E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 9.8E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 9.8E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 9.8E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 Gene3D G3DSA:3.40.190.10 189 284 4.4E-11 T 13-09-2016 PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 Gene3D G3DSA:1.10.10.10 16 98 1.6E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17810 b7e53b17f57aa472b8559f7302848528 317 SUPERFAMILY SSF53850 103 316 1.54E-24 T 13-09-2016 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 Gene3D G3DSA:1.20.120.620 387 489 2.1E-26 T 13-09-2016 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 Gene3D G3DSA:1.10.287.130 647 705 8.8E-19 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 Pfam PF13493 Domain of unknown function (DUF4118) 390 494 7.8E-26 T 13-09-2016 IPR025201 Sensor protein KdpD, transmembrane domain PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 Gene3D G3DSA:3.40.50.300 18 225 6.5E-95 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 PANTHER PTHR24423:SF562 583 877 1.0E-197 T 13-09-2016 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 PANTHER PTHR24423:SF562 16 194 1.0E-197 T 13-09-2016 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 Pfam PF00512 His Kinase A (phospho-acceptor) domain 652 719 7.4E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 SUPERFAMILY SSF52402 248 361 2.77E-13 T 13-09-2016 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 PANTHER PTHR24423 583 877 1.0E-197 T 13-09-2016 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 PANTHER PTHR24423 16 194 1.0E-197 T 13-09-2016 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 SUPERFAMILY SSF47384 647 719 1.53E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 SMART SM00387 763 875 1.1E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 Gene3D G3DSA:3.40.50.620 243 361 4.0E-15 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 SUPERFAMILY SSF55781 514 642 1.65E-7 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 SUPERFAMILY SSF55874 709 874 1.96E-38 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 768 874 7.8E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 19 227 5.2E-92 T 13-09-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 Gene3D G3DSA:3.30.565.10 706 876 3.1E-37 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 SMART SM00388 651 719 5.3E-17 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 Pfam PF00582 Universal stress protein family 248 360 2.4E-11 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 PRINTS PR00344 Bacterial sensor protein C-terminal signature 859 872 2.1E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 PRINTS PR00344 Bacterial sensor protein C-terminal signature 834 852 2.1E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 PRINTS PR00344 Bacterial sensor protein C-terminal signature 800 814 2.1E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS20795 6b806c3b38dca4721dc0a09ae1495b89 883 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 828 2.1E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 8.0E-89 T 13-09-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 Gene3D G3DSA:3.20.190.10 2 130 3.2E-38 T 13-09-2016 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 SUPERFAMILY SSF57716 218 269 2.28E-15 T 13-09-2016 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 SMART SM00898 2 116 4.4E-53 T 13-09-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 SUPERFAMILY SSF46946 131 222 3.14E-26 T 13-09-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 SMART SM01232 130 222 6.2E-43 T 13-09-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 4.2E-22 T 13-09-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 13-09-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 Pfam PF06827 Zinc finger found in FPG and IleRS 245 269 2.8E-5 T 13-09-2016 IPR010663 Zinc finger, FPG/IleRS-type PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 SUPERFAMILY SSF81624 2 135 4.45E-39 T 13-09-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 PANTHER PTHR22993:SF15 1 269 1.2E-122 T 13-09-2016 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 43.207 T 13-09-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 1.5E-33 T 13-09-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 Gene3D G3DSA:1.10.8.50 131 270 1.9E-45 T 13-09-2016 PMA3_RS28640 2729bf78528f651b776217f59e056b1e 270 PANTHER PTHR22993 1 269 1.2E-122 T 13-09-2016 PMA3_RS27040 7dbecc4d6dfde1c358de75f80a4f850f 110 PANTHER PTHR30348 4 84 3.6E-46 T 13-09-2016 PMA3_RS27040 7dbecc4d6dfde1c358de75f80a4f850f 110 Pfam PF01904 Protein of unknown function DUF72 21 90 1.0E-19 T 13-09-2016 IPR002763 Protein of unknown function DUF72 PMA3_RS27040 7dbecc4d6dfde1c358de75f80a4f850f 110 PANTHER PTHR30348:SF7 4 84 3.6E-46 T 13-09-2016 PMA3_RS27040 7dbecc4d6dfde1c358de75f80a4f850f 110 SUPERFAMILY SSF117396 4 88 3.53E-31 T 13-09-2016 IPR002763 Protein of unknown function DUF72 PMA3_RS27040 7dbecc4d6dfde1c358de75f80a4f850f 110 Gene3D G3DSA:3.20.20.410 2 87 2.2E-32 T 13-09-2016 IPR002763 Protein of unknown function DUF72 PMA3_RS28610 e6ffda6323e9e421d2b33d5d44bb29a9 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS28610 e6ffda6323e9e421d2b33d5d44bb29a9 476 SUPERFAMILY SSF53720 14 471 2.36E-118 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS28610 e6ffda6323e9e421d2b33d5d44bb29a9 476 Gene3D G3DSA:3.40.309.10 240 426 9.8E-54 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS28610 e6ffda6323e9e421d2b33d5d44bb29a9 476 PANTHER PTHR11699 16 476 2.2E-155 T 13-09-2016 PMA3_RS28610 e6ffda6323e9e421d2b33d5d44bb29a9 476 Gene3D G3DSA:3.40.605.10 16 239 5.5E-56 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS28610 e6ffda6323e9e421d2b33d5d44bb29a9 476 PIRSF PIRSF036492 6 476 3.8E-164 T 13-09-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 PMA3_RS28610 e6ffda6323e9e421d2b33d5d44bb29a9 476 Pfam PF00171 Aldehyde dehydrogenase family 24 445 4.5E-89 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 Gene3D G3DSA:3.40.50.2300 9 150 2.3E-31 T 13-09-2016 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 3.5E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 3.5E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 3.5E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 SMART SM00421 142 199 4.5E-18 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 PANTHER PTHR26402:SF546 7 200 1.7E-97 T 13-09-2016 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 PANTHER PTHR26402 7 200 1.7E-97 T 13-09-2016 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 SUPERFAMILY SSF52172 9 156 2.7E-32 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 SUPERFAMILY SSF46894 135 206 5.1E-19 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 Gene3D G3DSA:1.10.10.10 151 207 1.6E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 Pfam PF00072 Response regulator receiver domain 9 118 2.8E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 SMART SM00448 7 118 2.9E-24 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13975 bc7b8b1f03c41d38253fc56d1fe31c6c 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 199 2.3E-17 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03465 73752bd620494b230c4a3b3961190cf6 161 SUPERFAMILY SSF55083 1 152 6.02E-49 T 13-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS03465 73752bd620494b230c4a3b3961190cf6 161 PANTHER PTHR20941:SF10 1 158 1.8E-60 T 13-09-2016 PMA3_RS03465 73752bd620494b230c4a3b3961190cf6 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 132 5.6E-40 T 13-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS03465 73752bd620494b230c4a3b3961190cf6 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 13-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS03465 73752bd620494b230c4a3b3961190cf6 161 Gene3D G3DSA:3.30.70.560 3 151 7.0E-50 T 13-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS03465 73752bd620494b230c4a3b3961190cf6 161 PANTHER PTHR20941 1 158 1.8E-60 T 13-09-2016 PMA3_RS03465 73752bd620494b230c4a3b3961190cf6 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 8.9E-35 T 13-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS20510 e4f14cd900d5dee26f4883d1f173424d 178 PANTHER PTHR38037 7 178 5.2E-52 T 13-09-2016 PMA3_RS20510 e4f14cd900d5dee26f4883d1f173424d 178 SUPERFAMILY SSF50630 26 164 2.59E-38 T 13-09-2016 IPR021109 Aspartic peptidase domain PMA3_RS20510 e4f14cd900d5dee26f4883d1f173424d 178 Pfam PF05618 Putative ATP-dependant zinc protease 26 167 3.1E-47 T 13-09-2016 PMA3_RS20510 e4f14cd900d5dee26f4883d1f173424d 178 Gene3D G3DSA:2.40.70.10 23 159 5.2E-44 T 13-09-2016 IPR021109 Aspartic peptidase domain PMA3_RS23760 80b5fe89f10832a33a178bf37b787f38 348 PANTHER PTHR11647 1 317 5.0E-167 T 13-09-2016 PMA3_RS23760 80b5fe89f10832a33a178bf37b787f38 348 PANTHER PTHR11647:SF59 1 317 5.0E-167 T 13-09-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS23760 80b5fe89f10832a33a178bf37b787f38 348 Pfam PF01979 Amidohydrolase family 12 310 8.2E-16 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS23760 80b5fe89f10832a33a178bf37b787f38 348 Gene3D G3DSA:3.20.20.140 2 343 5.7E-136 T 13-09-2016 PMA3_RS23760 80b5fe89f10832a33a178bf37b787f38 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 1.3E-141 T 13-09-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS23760 80b5fe89f10832a33a178bf37b787f38 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 13-09-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS23760 80b5fe89f10832a33a178bf37b787f38 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 13-09-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS23760 80b5fe89f10832a33a178bf37b787f38 348 PIRSF PIRSF001237 1 346 4.5E-141 T 13-09-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS23760 80b5fe89f10832a33a178bf37b787f38 348 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 44.773 T 13-09-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS23760 80b5fe89f10832a33a178bf37b787f38 348 SUPERFAMILY SSF51556 3 343 4.3E-147 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 Gene3D G3DSA:3.20.20.10 37 255 3.1E-61 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 54 72 - T 13-09-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 190 9.2E-18 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 54 72 9.2E-18 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 74 86 9.2E-18 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 261 280 9.2E-18 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 PANTHER PTHR11482:SF6 3 387 9.7E-127 T 13-09-2016 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 PANTHER PTHR11482 3 387 9.7E-127 T 13-09-2016 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 SUPERFAMILY SSF51419 25 273 2.06E-62 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 Gene3D G3DSA:2.40.37.10 256 387 6.6E-29 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 13-09-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 44 272 5.8E-54 T 13-09-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 276 384 9.7E-17 T 13-09-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 SUPERFAMILY SSF50621 245 387 1.44E-31 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 PRINTS PR01182 Ornithine decarboxylase signature 96 120 2.2E-17 T 13-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 PRINTS PR01182 Ornithine decarboxylase signature 126 148 2.2E-17 T 13-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 PRINTS PR01182 Ornithine decarboxylase signature 52 79 2.2E-17 T 13-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 PMA3_RS25380 a4fb8a5ad1adfdc9efde55a6d51f0898 387 PRINTS PR01182 Ornithine decarboxylase signature 329 339 2.2E-17 T 13-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 PMA3_RS29820 4e3e8a2ac384ff299d00f85153da8ebc 278 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 165 2.4E-26 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS29820 4e3e8a2ac384ff299d00f85153da8ebc 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 269 2.5E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29820 4e3e8a2ac384ff299d00f85153da8ebc 278 PANTHER PTHR30614 71 276 3.0E-79 T 13-09-2016 PMA3_RS29820 4e3e8a2ac384ff299d00f85153da8ebc 278 Gene3D G3DSA:1.10.3720.10 70 270 2.5E-49 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29820 4e3e8a2ac384ff299d00f85153da8ebc 278 SUPERFAMILY SSF161098 69 262 5.49E-46 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12135 0d1bd62a9619134a762da58402f3bc9f 336 SUPERFAMILY SSF81606 147 331 9.02E-10 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS12135 0d1bd62a9619134a762da58402f3bc9f 336 Pfam PF13581 Histidine kinase-like ATPase domain 17 117 6.4E-8 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12135 0d1bd62a9619134a762da58402f3bc9f 336 PANTHER PTHR35801:SF1 1 336 7.3E-54 T 13-09-2016 PMA3_RS12135 0d1bd62a9619134a762da58402f3bc9f 336 SMART SM00331 141 331 6.7E-4 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS12135 0d1bd62a9619134a762da58402f3bc9f 336 SUPERFAMILY SSF55874 27 109 2.01E-5 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12135 0d1bd62a9619134a762da58402f3bc9f 336 Gene3D G3DSA:3.30.565.10 16 108 4.4E-5 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12135 0d1bd62a9619134a762da58402f3bc9f 336 PANTHER PTHR35801 1 336 7.3E-54 T 13-09-2016 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 PANTHER PTHR10520 1 425 7.9E-285 T 13-09-2016 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 102 295 3.8E-82 T 13-09-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 SMART SM01209 102 295 5.3E-140 T 13-09-2016 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 330 420 4.0E-28 T 13-09-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 42.688 T 13-09-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 SUPERFAMILY SSF51246 328 423 4.87E-32 T 13-09-2016 IPR011054 Rudiment single hybrid motif PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 Gene3D G3DSA:3.40.50.20 2 94 2.2E-36 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 Gene3D G3DSA:3.30.1490.20 120 189 5.5E-33 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 Gene3D G3DSA:3.90.600.10 330 422 7.9E-35 T 13-09-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 SUPERFAMILY SSF56059 103 321 5.48E-64 T 13-09-2016 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 Gene3D G3DSA:3.30.470.20 190 327 1.4E-61 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 1.4E-178 T 13-09-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 SMART SM01210 329 422 7.0E-53 T 13-09-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 SUPERFAMILY SSF52440 1 102 1.41E-34 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 289 296 - T 13-09-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS02530 0f138e0ebb28b1a0b45beec6ec02ce42 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 2.1E-33 T 13-09-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS22580 c6d96073eb0cbca56142c55c2b4c1c0b 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 7.3E-19 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS22580 c6d96073eb0cbca56142c55c2b4c1c0b 223 PANTHER PTHR26402:SF316 1 219 1.2E-81 T 13-09-2016 PMA3_RS22580 c6d96073eb0cbca56142c55c2b4c1c0b 223 PANTHER PTHR26402 1 219 1.2E-81 T 13-09-2016 PMA3_RS22580 c6d96073eb0cbca56142c55c2b4c1c0b 223 SUPERFAMILY SSF52172 1 173 1.71E-38 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS22580 c6d96073eb0cbca56142c55c2b4c1c0b 223 Pfam PF00072 Response regulator receiver domain 3 112 5.6E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS22580 c6d96073eb0cbca56142c55c2b4c1c0b 223 SMART SM00448 1 112 1.7E-36 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS22580 c6d96073eb0cbca56142c55c2b4c1c0b 223 Gene3D G3DSA:3.40.50.2300 1 119 3.1E-37 T 13-09-2016 PMA3_RS22580 c6d96073eb0cbca56142c55c2b4c1c0b 223 SMART SM00862 145 218 2.8E-20 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS22580 c6d96073eb0cbca56142c55c2b4c1c0b 223 Gene3D G3DSA:1.10.10.10 127 220 3.8E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12275 a2741a3eebbac1ad9838d512c9fba113 1308 Pfam PF02514 CobN/Magnesium Chelatase 138 1292 0.0 T 13-09-2016 IPR003672 CobN/magnesium chelatase GO:0009058 PMA3_RS12275 a2741a3eebbac1ad9838d512c9fba113 1308 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1305 0.0 T 13-09-2016 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 PMA3_RS12275 a2741a3eebbac1ad9838d512c9fba113 1308 PANTHER PTHR23304:SF96 26 841 0.0 T 13-09-2016 PMA3_RS12275 a2741a3eebbac1ad9838d512c9fba113 1308 PANTHER PTHR23304:SF96 866 1307 0.0 T 13-09-2016 PMA3_RS12275 a2741a3eebbac1ad9838d512c9fba113 1308 PANTHER PTHR23304 866 1307 0.0 T 13-09-2016 PMA3_RS12275 a2741a3eebbac1ad9838d512c9fba113 1308 PANTHER PTHR23304 26 841 0.0 T 13-09-2016 PMA3_RS15750 8c39a05dde8648fa37efa52a318f17d4 394 Pfam PF13609 Gram-negative porin 22 371 2.8E-30 T 13-09-2016 PMA3_RS15750 8c39a05dde8648fa37efa52a318f17d4 394 Gene3D G3DSA:2.40.160.10 34 391 9.6E-14 T 13-09-2016 IPR023614 Porin domain PMA3_RS15750 8c39a05dde8648fa37efa52a318f17d4 394 SUPERFAMILY SSF56935 33 392 4.27E-36 T 13-09-2016 PMA3_RS08280 10c40cca855d9b54c73ac9770aefcee6 278 Pfam PF09339 IclR helix-turn-helix domain 18 69 8.0E-15 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS08280 10c40cca855d9b54c73ac9770aefcee6 278 PANTHER PTHR30136:SF3 6 273 4.6E-48 T 13-09-2016 PMA3_RS08280 10c40cca855d9b54c73ac9770aefcee6 278 Gene3D G3DSA:3.30.450.40 85 261 1.7E-36 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS08280 10c40cca855d9b54c73ac9770aefcee6 278 PANTHER PTHR30136 6 273 4.6E-48 T 13-09-2016 PMA3_RS08280 10c40cca855d9b54c73ac9770aefcee6 278 SMART SM00346 16 107 4.7E-15 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS08280 10c40cca855d9b54c73ac9770aefcee6 278 SMART SM00418 21 87 0.0072 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS08280 10c40cca855d9b54c73ac9770aefcee6 278 SUPERFAMILY SSF46785 16 88 1.94E-12 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08280 10c40cca855d9b54c73ac9770aefcee6 278 SUPERFAMILY SSF55781 82 262 1.44E-35 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS08280 10c40cca855d9b54c73ac9770aefcee6 278 Pfam PF01614 Bacterial transcriptional regulator 156 255 9.8E-13 T 13-09-2016 IPR014757 Transcription regulator IclR, C-terminal PMA3_RS08280 10c40cca855d9b54c73ac9770aefcee6 278 Gene3D G3DSA:1.10.10.10 10 84 3.7E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06785 71515cc4f788fbc82d9a8c0662e147b3 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 6.7E-46 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS06785 71515cc4f788fbc82d9a8c0662e147b3 249 PANTHER PTHR21294 1 249 4.3E-152 T 13-09-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PMA3_RS06785 71515cc4f788fbc82d9a8c0662e147b3 249 PIRSF PIRSF000090 1 249 3.8E-84 T 13-09-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PMA3_RS06785 71515cc4f788fbc82d9a8c0662e147b3 249 Gene3D G3DSA:3.40.50.620 1 247 1.3E-102 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS06785 71515cc4f788fbc82d9a8c0662e147b3 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 13-09-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 PMA3_RS06785 71515cc4f788fbc82d9a8c0662e147b3 249 SMART SM00893 23 211 8.0E-69 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS06785 71515cc4f788fbc82d9a8c0662e147b3 249 SUPERFAMILY SSF52402 1 242 3.63E-85 T 13-09-2016 PMA3_RS06785 71515cc4f788fbc82d9a8c0662e147b3 249 PANTHER PTHR21294:SF8 1 249 4.3E-152 T 13-09-2016 PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 SUPERFAMILY SSF51430 2 257 1.44E-79 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 PIRSF PIRSF000097 1 265 2.4E-66 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 Pfam PF00248 Aldo/keto reductase family 8 248 1.5E-45 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 PANTHER PTHR11732 1 267 7.5E-162 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 PANTHER PTHR11732:SF100 1 267 7.5E-162 T 13-09-2016 PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 Gene3D G3DSA:3.20.20.100 1 259 2.2E-87 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 1.3E-46 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 1.3E-46 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 1.3E-46 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 1.3E-46 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 1.3E-46 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 13-09-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PMA3_RS20090 1163ff95a0f25b1c72d83549dc1bb319 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 13-09-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR01900 YidC translocation/secretion protein signature 506 530 9.9E-29 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR01900 YidC translocation/secretion protein signature 358 374 9.9E-29 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR01900 YidC translocation/secretion protein signature 487 502 9.9E-29 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 Pfam PF02096 60Kd inner membrane protein 373 551 1.4E-61 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 372 551 4.1E-72 T 13-09-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 553 25.217 T 13-09-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 Pfam PF14849 YidC periplasmic domain 85 362 1.6E-87 T 13-09-2016 IPR028053 Membrane insertase YidC, N-terminal PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 371 8.8E-112 T 13-09-2016 IPR028053 Membrane insertase YidC, N-terminal PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PANTHER PTHR12428 188 559 3.2E-132 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PANTHER PTHR12428:SF14 188 559 3.2E-132 T 13-09-2016 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR00701 60kDa inner membrane protein signature 434 457 4.2E-98 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR00701 60kDa inner membrane protein signature 90 111 4.2E-98 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR00701 60kDa inner membrane protein signature 517 540 4.2E-98 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR00701 60kDa inner membrane protein signature 2 23 4.2E-98 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR00701 60kDa inner membrane protein signature 343 363 4.2E-98 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR00701 60kDa inner membrane protein signature 270 285 4.2E-98 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR00701 60kDa inner membrane protein signature 481 503 4.2E-98 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR00701 60kDa inner membrane protein signature 237 255 4.2E-98 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS30085 98e9f00d5abef2ff95cdad891a10b7e2 562 PRINTS PR00701 60kDa inner membrane protein signature 181 201 4.2E-98 T 13-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PMA3_RS29800 84e1aa42857793a27ce9921bc55cf893 155 Gene3D G3DSA:3.40.630.30 1 146 3.7E-35 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS29800 84e1aa42857793a27ce9921bc55cf893 155 Pfam PF00583 Acetyltransferase (GNAT) family 57 134 1.2E-12 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS29800 84e1aa42857793a27ce9921bc55cf893 155 PANTHER PTHR10545 1 145 2.1E-56 T 13-09-2016 PMA3_RS29800 84e1aa42857793a27ce9921bc55cf893 155 SUPERFAMILY SSF55729 4 135 3.21E-32 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS29800 84e1aa42857793a27ce9921bc55cf893 155 PANTHER PTHR10545:SF39 1 145 2.1E-56 T 13-09-2016 IPR032962 Acetyltransferase HPA2/HPA3 GO:0016746 PMA3_RS07930 ad5bf73d154b5ba47c80a9bbca633aed 149 PANTHER PTHR41377:SF1 2 145 1.4E-51 T 13-09-2016 PMA3_RS07930 ad5bf73d154b5ba47c80a9bbca633aed 149 Pfam PF08837 Protein of unknown function (DUF1810) 10 143 1.9E-54 T 13-09-2016 IPR014937 Protein of unknown function DUF1810 PMA3_RS07930 ad5bf73d154b5ba47c80a9bbca633aed 149 PANTHER PTHR41377 2 145 1.4E-51 T 13-09-2016 PMA3_RS07930 ad5bf73d154b5ba47c80a9bbca633aed 149 SUPERFAMILY SSF140736 8 145 2.48E-56 T 13-09-2016 PMA3_RS07930 ad5bf73d154b5ba47c80a9bbca633aed 149 PIRSF PIRSF008546 6 147 1.5E-53 T 13-09-2016 IPR014937 Protein of unknown function DUF1810 PMA3_RS23315 041b92ed98ac8572276769de3ee8b04e 280 PANTHER PTHR30221:SF7 1 276 3.5E-92 T 13-09-2016 PMA3_RS23315 041b92ed98ac8572276769de3ee8b04e 280 PANTHER PTHR30221 1 276 3.5E-92 T 13-09-2016 PMA3_RS23315 041b92ed98ac8572276769de3ee8b04e 280 SUPERFAMILY SSF82861 25 109 6.54E-15 T 13-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PMA3_RS23315 041b92ed98ac8572276769de3ee8b04e 280 Gene3D G3DSA:3.30.70.100 179 262 9.3E-24 T 13-09-2016 PMA3_RS23315 041b92ed98ac8572276769de3ee8b04e 280 SUPERFAMILY SSF50182 111 175 1.8E-18 T 13-09-2016 IPR010920 LSM domain PMA3_RS23315 041b92ed98ac8572276769de3ee8b04e 280 Pfam PF00924 Mechanosensitive ion channel 69 264 6.7E-53 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS23315 041b92ed98ac8572276769de3ee8b04e 280 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 140 174 - T 13-09-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 PMA3_RS23315 041b92ed98ac8572276769de3ee8b04e 280 Gene3D G3DSA:2.30.30.60 126 175 7.6E-20 T 13-09-2016 PMA3_RS23315 041b92ed98ac8572276769de3ee8b04e 280 SUPERFAMILY SSF82689 177 275 6.41E-27 T 13-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 SUPERFAMILY SSF52172 9 192 6.4E-38 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 Gene3D G3DSA:1.10.10.60 393 448 1.9E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 Gene3D G3DSA:1.10.8.60 320 390 2.8E-26 T 13-09-2016 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 SUPERFAMILY SSF52540 150 388 1.78E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 SMART SM00448 9 120 1.1E-33 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 PANTHER PTHR32071:SF18 1 448 5.2E-187 T 13-09-2016 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 PANTHER PTHR32071 1 448 5.2E-187 T 13-09-2016 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 Gene3D G3DSA:3.40.50.2300 10 139 9.3E-33 T 13-09-2016 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 Pfam PF00072 Response regulator receiver domain 11 119 4.1E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 SMART SM00382 167 310 3.1E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 SUPERFAMILY SSF46689 360 448 3.41E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 8.9E-9 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 Gene3D G3DSA:3.40.50.300 149 319 2.8E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30315 97238af103f4f6a53b12f430b05e3387 448 Pfam PF00158 Sigma-54 interaction domain 149 313 3.2E-62 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS04845 4df9daf09a7ab284bbddf7aa7ee9ead6 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 3.4E-89 T 13-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PMA3_RS04845 4df9daf09a7ab284bbddf7aa7ee9ead6 251 SUPERFAMILY SSF64005 11 235 2.75E-85 T 13-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PMA3_RS04845 4df9daf09a7ab284bbddf7aa7ee9ead6 251 Gene3D G3DSA:3.40.1180.10 6 246 3.0E-100 T 13-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PMA3_RS04845 4df9daf09a7ab284bbddf7aa7ee9ead6 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 3.9E-78 T 13-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PMA3_RS04845 4df9daf09a7ab284bbddf7aa7ee9ead6 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 39.07 T 13-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PMA3_RS04845 4df9daf09a7ab284bbddf7aa7ee9ead6 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 13-09-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 PMA3_RS04845 4df9daf09a7ab284bbddf7aa7ee9ead6 251 PANTHER PTHR10291 12 251 1.3E-117 T 13-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 PANTHER PTHR11751 12 77 2.3E-43 T 13-09-2016 PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 SMART SM00895 99 231 2.0E-18 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 Gene3D G3DSA:1.10.10.10 7 76 2.2E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 PANTHER PTHR11751 93 115 2.3E-43 T 13-09-2016 PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.8E-11 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.8E-11 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 Pfam PF07729 FCD domain 99 229 1.6E-22 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 SMART SM00345 15 74 2.8E-25 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 SUPERFAMILY SSF46785 5 76 2.77E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 6.4E-23 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 PANTHER PTHR11751:SF355 93 115 2.3E-43 T 13-09-2016 PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 PANTHER PTHR11751:SF355 12 77 2.3E-43 T 13-09-2016 PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 Gene3D G3DSA:1.20.120.530 96 239 3.7E-23 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS25625 5afedc998ed025c8dbbf8cd3c8156595 255 SUPERFAMILY SSF48008 96 237 3.66E-24 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS21490 50bbf4db7e7948bea51af9584811cdb3 178 PANTHER PTHR10681 1 172 1.9E-50 T 13-09-2016 PMA3_RS21490 50bbf4db7e7948bea51af9584811cdb3 178 Pfam PF08534 Redoxin 37 158 3.2E-14 T 13-09-2016 IPR013740 Redoxin GO:0016491 PMA3_RS21490 50bbf4db7e7948bea51af9584811cdb3 178 SUPERFAMILY SSF52833 41 170 3.79E-35 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS21490 50bbf4db7e7948bea51af9584811cdb3 178 Gene3D G3DSA:3.40.30.10 7 175 7.5E-39 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS21490 50bbf4db7e7948bea51af9584811cdb3 178 PANTHER PTHR10681:SF107 1 172 1.9E-50 T 13-09-2016 PMA3_RS21490 50bbf4db7e7948bea51af9584811cdb3 178 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 169 1.5E-52 T 13-09-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 PANTHER PTHR11019 93 326 1.2E-57 T 13-09-2016 PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 Gene3D G3DSA:1.10.10.60 273 321 3.1E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 Gene3D G3DSA:3.40.50.880 10 223 1.5E-44 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 PANTHER PTHR11019:SF68 93 326 1.2E-57 T 13-09-2016 PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 Pfam PF12833 Helix-turn-helix domain 241 320 2.6E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 SUPERFAMILY SSF52317 10 198 3.0E-35 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 Pfam PF01965 DJ-1/PfpI family 87 179 5.7E-11 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 SUPERFAMILY SSF46689 220 269 1.19E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 SUPERFAMILY SSF46689 271 321 1.97E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 Gene3D G3DSA:1.10.10.60 224 272 1.1E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS27070 9f8d16f2f2317e2dd2a6f85b0284e20b 331 SMART SM00342 235 318 1.7E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 91 1.1E-7 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 339 3.3E-169 T 13-09-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 152 173 - T 13-09-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 PANTHER PTHR11695 18 337 1.7E-131 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 SUPERFAMILY SSF50129 10 147 1.19E-35 T 13-09-2016 IPR011032 GroES-like PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 Pfam PF13602 Zinc-binding dehydrogenase 196 336 5.2E-22 T 13-09-2016 PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 Gene3D G3DSA:3.90.180.10 18 159 6.6E-38 T 13-09-2016 IPR011032 GroES-like PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 Gene3D G3DSA:3.40.50.720 160 285 5.1E-18 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 SMART SM00829 13 336 4.7E-11 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 SUPERFAMILY SSF51735 119 289 4.49E-34 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14525 49edeeaa50d49d0a5c667ad9d8426d1e 339 PANTHER PTHR11695:SF558 18 337 1.7E-131 T 13-09-2016 PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.4E-97 T 13-09-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 Pfam PF07650 KH domain 38 111 4.1E-22 T 13-09-2016 IPR004044 K Homology domain, type 2 GO:0003723 PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.757 T 13-09-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 Gene3D G3DSA:3.30.1140.32 108 207 1.1E-47 T 13-09-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 13-09-2016 IPR018280 Ribosomal protein S3, conserved site PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 SUPERFAMILY SSF54821 108 206 1.31E-41 T 13-09-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 PANTHER PTHR11760 2 222 1.6E-145 T 13-09-2016 PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 PANTHER PTHR11760:SF19 2 222 1.6E-145 T 13-09-2016 PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 9.8E-42 T 13-09-2016 PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 Gene3D G3DSA:3.30.300.20 17 107 6.9E-34 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 SMART SM00322 60 125 3.9E-8 T 13-09-2016 IPR004087 K Homology domain GO:0003676 PMA3_RS27235 90c1758a5be73632fc7017c176e98999 228 SUPERFAMILY SSF54814 2 106 2.46E-38 T 13-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PMA3_RS00630 1052179a03451084771f9b0fb7ae1784 386 Pfam PF13175 AAA ATPase domain 1 48 1.1E-9 T 13-09-2016 PMA3_RS00630 1052179a03451084771f9b0fb7ae1784 386 PIRSF PIRSF029347 1 386 7.2E-164 T 13-09-2016 IPR014555 RecF-like PMA3_RS00630 1052179a03451084771f9b0fb7ae1784 386 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 190 345 7.6E-19 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS00630 1052179a03451084771f9b0fb7ae1784 386 Gene3D G3DSA:3.40.50.300 150 354 2.0E-28 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00630 1052179a03451084771f9b0fb7ae1784 386 Gene3D G3DSA:3.40.50.300 1 98 2.0E-28 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00630 1052179a03451084771f9b0fb7ae1784 386 PANTHER PTHR32182:SF13 1 373 5.6E-83 T 13-09-2016 PMA3_RS00630 1052179a03451084771f9b0fb7ae1784 386 SUPERFAMILY SSF52540 219 351 2.43E-24 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00630 1052179a03451084771f9b0fb7ae1784 386 SUPERFAMILY SSF52540 1 118 2.43E-24 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00630 1052179a03451084771f9b0fb7ae1784 386 PANTHER PTHR32182 1 373 5.6E-83 T 13-09-2016 PMA3_RS27420 764a122da354c9a33f50013242ba62b3 142 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 142 1.3E-56 T 13-09-2016 IPR005265 Uncharacterised protein family UPF0093 PMA3_RS27420 764a122da354c9a33f50013242ba62b3 142 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 3 142 8.5E-50 T 13-09-2016 IPR014351 Conserved hypothetical protein CHP00701 PMA3_RS27420 764a122da354c9a33f50013242ba62b3 142 PIRSF PIRSF004638 1 142 5.8E-60 T 13-09-2016 IPR005265 Uncharacterised protein family UPF0093 PMA3_RS27420 764a122da354c9a33f50013242ba62b3 142 PANTHER PTHR40255 1 142 9.6E-58 T 13-09-2016 PMA3_RS28805 b178ed279e00d2f54041a017b72e8d74 464 SUPERFAMILY SSF56176 4 217 5.14E-68 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS28805 b178ed279e00d2f54041a017b72e8d74 464 Gene3D G3DSA:1.10.45.10 422 461 6.8E-14 T 13-09-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PMA3_RS28805 b178ed279e00d2f54041a017b72e8d74 464 SUPERFAMILY SSF55103 223 462 1.03E-60 T 13-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PMA3_RS28805 b178ed279e00d2f54041a017b72e8d74 464 Gene3D G3DSA:3.30.43.10 2 95 4.5E-30 T 13-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PMA3_RS28805 b178ed279e00d2f54041a017b72e8d74 464 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 461 3.7E-63 T 13-09-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PMA3_RS28805 b178ed279e00d2f54041a017b72e8d74 464 PANTHER PTHR11748:SF76 1 464 1.4E-230 T 13-09-2016 PMA3_RS28805 b178ed279e00d2f54041a017b72e8d74 464 Gene3D G3DSA:3.30.465.10 96 217 4.5E-38 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS28805 b178ed279e00d2f54041a017b72e8d74 464 Pfam PF01565 FAD binding domain 41 179 2.6E-37 T 13-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PMA3_RS28805 b178ed279e00d2f54041a017b72e8d74 464 PANTHER PTHR11748 1 464 1.4E-230 T 13-09-2016 PMA3_RS22665 6546cd355d8c6ca8fdaa55263bad7035 294 Pfam PF12146 Serine aminopeptidase, S33 26 252 2.6E-8 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS22665 6546cd355d8c6ca8fdaa55263bad7035 294 SUPERFAMILY SSF53474 13 261 1.34E-28 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS22665 6546cd355d8c6ca8fdaa55263bad7035 294 Gene3D G3DSA:3.40.50.1820 4 131 8.5E-29 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS22665 6546cd355d8c6ca8fdaa55263bad7035 294 Gene3D G3DSA:3.40.50.1820 198 273 8.5E-29 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS22665 6546cd355d8c6ca8fdaa55263bad7035 294 PANTHER PTHR10992 29 274 6.8E-14 T 13-09-2016 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 Gene3D G3DSA:1.20.120.160 8 134 2.9E-29 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 Gene3D G3DSA:2.30.30.40 483 504 2.4E-13 T 13-09-2016 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 Gene3D G3DSA:2.30.30.40 569 613 2.4E-13 T 13-09-2016 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 Pfam PF00072 Response regulator receiver domain 644 755 5.9E-25 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 Pfam PF01584 CheW-like domain 489 617 2.1E-16 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 Gene3D G3DSA:3.40.50.2300 638 762 2.4E-33 T 13-09-2016 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 SMART SM00448 642 756 1.7E-31 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 SUPERFAMILY SSF47226 8 128 9.55E-24 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 SMART SM00387 340 483 8.4E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 SUPERFAMILY SSF50341 482 614 2.09E-23 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 PANTHER PTHR22617:SF6 273 630 9.2E-133 T 13-09-2016 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 PANTHER PTHR22617 163 234 9.2E-133 T 13-09-2016 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 482 8.9E-11 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 6.0E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 6.0E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 6.0E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 SUPERFAMILY SSF55874 299 481 3.27E-35 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 PANTHER PTHR22617:SF6 163 234 9.2E-133 T 13-09-2016 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 Pfam PF01627 Hpt domain 11 100 3.2E-13 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 Gene3D G3DSA:3.30.565.10 301 482 3.4E-31 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 SMART SM00260 475 614 7.1E-10 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 SUPERFAMILY SSF52172 638 762 9.53E-32 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 SMART SM00073 8 105 6.2E-12 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS04595 3f537c4e0cb36bbff99dd9c8f6ac8b00 765 PANTHER PTHR22617 273 630 9.2E-133 T 13-09-2016 PMA3_RS22435 7c0472d939520abf1c16383af6a212bf 415 PANTHER PTHR10742:SF275 1 415 2.1E-197 T 13-09-2016 PMA3_RS22435 7c0472d939520abf1c16383af6a212bf 415 Gene3D G3DSA:3.50.50.60 201 304 1.4E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22435 7c0472d939520abf1c16383af6a212bf 415 Gene3D G3DSA:3.50.50.60 1 110 1.4E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22435 7c0472d939520abf1c16383af6a212bf 415 PANTHER PTHR10742 1 415 2.1E-197 T 13-09-2016 PMA3_RS22435 7c0472d939520abf1c16383af6a212bf 415 SUPERFAMILY SSF51905 380 410 4.4E-55 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22435 7c0472d939520abf1c16383af6a212bf 415 SUPERFAMILY SSF51905 1 300 4.4E-55 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22435 7c0472d939520abf1c16383af6a212bf 415 Pfam PF01593 Flavin containing amine oxidoreductase 10 297 6.1E-20 T 13-09-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 Pfam PF09278 MerR, DNA binding 50 113 4.6E-18 T 13-09-2016 IPR015358 Transcription regulator MerR, DNA binding PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 Gene3D G3DSA:1.10.1660.10 4 60 1.7E-25 T 13-09-2016 PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 Gene3D G3DSA:1.10.1660.10 61 133 2.5E-25 T 13-09-2016 PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 PANTHER PTHR30204:SF18 1 132 5.3E-33 T 13-09-2016 PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 3.6E-8 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 7 18 3.6E-8 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 31 3.6E-8 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 Pfam PF00376 MerR family regulatory protein 7 44 6.5E-14 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 SMART SM00422 6 75 3.6E-26 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 PANTHER PTHR30204 1 132 5.3E-33 T 13-09-2016 PMA3_RS06430 1e07d37d1516264621c5bd36e33f3010 135 SUPERFAMILY SSF46955 6 131 4.76E-34 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 SUPERFAMILY SSF51735 9 254 9.58E-79 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 Gene3D G3DSA:3.40.50.720 8 254 1.1E-80 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PANTHER PTHR24322 13 141 1.1E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PANTHER PTHR24322 158 190 1.1E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.7E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.7E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 6.7E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.7E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.7E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.7E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 252 2.8E-67 T 13-09-2016 PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14660 bc5e6ad488ec0cc3ff086d4d46f1128a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS17670 578dc19118550676ad2deb0602f0e243 202 PANTHER PTHR21666 55 192 1.3E-37 T 13-09-2016 PMA3_RS17670 578dc19118550676ad2deb0602f0e243 202 Pfam PF01464 Transglycosylase SLT domain 73 167 2.9E-26 T 13-09-2016 IPR008258 Transglycosylase SLT domain 1 PMA3_RS17670 578dc19118550676ad2deb0602f0e243 202 SUPERFAMILY SSF53955 66 194 2.19E-42 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS17670 578dc19118550676ad2deb0602f0e243 202 Gene3D G3DSA:1.10.530.10 68 196 2.8E-44 T 13-09-2016 PMA3_RS17670 578dc19118550676ad2deb0602f0e243 202 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 91 119 - T 13-09-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PMA3_RS01415 451bb5968dfc44e466222660cfe6c44a 560 SUPERFAMILY SSF53474 211 491 2.63E-32 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01415 451bb5968dfc44e466222660cfe6c44a 560 PANTHER PTHR36837 1 560 5.0E-251 T 13-09-2016 PMA3_RS01415 451bb5968dfc44e466222660cfe6c44a 560 PANTHER PTHR36837:SF2 1 560 5.0E-251 T 13-09-2016 PMA3_RS01415 451bb5968dfc44e466222660cfe6c44a 560 Gene3D G3DSA:3.40.50.1820 160 531 5.0E-57 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01415 451bb5968dfc44e466222660cfe6c44a 560 TIGRFAM TIGR01839 PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II 1 560 0.0 T 13-09-2016 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PMA3_RS01415 451bb5968dfc44e466222660cfe6c44a 560 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 76 243 1.2E-63 T 13-09-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PMA3_RS08820 9f225d2478b621477c8b1378fe94a076 263 Gene3D G3DSA:3.40.190.10 34 123 6.6E-28 T 13-09-2016 PMA3_RS08820 9f225d2478b621477c8b1378fe94a076 263 Gene3D G3DSA:3.40.190.10 219 259 6.6E-28 T 13-09-2016 PMA3_RS08820 9f225d2478b621477c8b1378fe94a076 263 SUPERFAMILY SSF53850 1 257 2.21E-44 T 13-09-2016 PMA3_RS08820 9f225d2478b621477c8b1378fe94a076 263 SMART SM00062 37 260 4.9E-32 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS08820 9f225d2478b621477c8b1378fe94a076 263 Gene3D G3DSA:3.40.190.10 153 207 4.3E-4 T 13-09-2016 PMA3_RS08820 9f225d2478b621477c8b1378fe94a076 263 PANTHER PTHR18966 24 257 7.0E-96 T 13-09-2016 PMA3_RS08820 9f225d2478b621477c8b1378fe94a076 263 PANTHER PTHR18966:SF243 24 257 7.0E-96 T 13-09-2016 PMA3_RS08820 9f225d2478b621477c8b1378fe94a076 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 257 2.4E-36 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS01410 5c158e9c2b5c7b143fbd6a92ba1c75be 206 SUPERFAMILY SSF46689 2 67 4.11E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS01410 5c158e9c2b5c7b143fbd6a92ba1c75be 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.5E-9 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS01410 5c158e9c2b5c7b143fbd6a92ba1c75be 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.5E-9 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS01410 5c158e9c2b5c7b143fbd6a92ba1c75be 206 PANTHER PTHR30055:SF30 1 188 3.3E-49 T 13-09-2016 PMA3_RS01410 5c158e9c2b5c7b143fbd6a92ba1c75be 206 Pfam PF13972 Bacterial transcriptional repressor 56 188 9.6E-33 T 13-09-2016 IPR025722 Bacterial transcriptional repressor TetR PMA3_RS01410 5c158e9c2b5c7b143fbd6a92ba1c75be 206 Gene3D G3DSA:1.10.357.10 2 188 1.8E-28 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS01410 5c158e9c2b5c7b143fbd6a92ba1c75be 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 2.9E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS01410 5c158e9c2b5c7b143fbd6a92ba1c75be 206 PANTHER PTHR30055 1 188 3.3E-49 T 13-09-2016 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 Pfam PF00175 Oxidoreductase NAD-binding domain 117 234 8.1E-14 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 SUPERFAMILY SSF52343 109 258 4.85E-34 T 13-09-2016 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 Gene3D G3DSA:3.40.50.80 106 258 1.9E-44 T 13-09-2016 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 Pfam PF00970 Oxidoreductase FAD-binding domain 24 95 1.1E-7 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 56 63 1.7E-6 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 1.7E-6 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 1.7E-6 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 219 227 1.7E-6 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 141 150 2.4E-5 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 116 135 2.4E-5 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 36 48 2.4E-5 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 2.4E-5 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 PANTHER PTHR19370 1 241 4.2E-105 T 13-09-2016 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 PANTHER PTHR19370:SF98 1 241 4.2E-105 T 13-09-2016 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 Gene3D G3DSA:2.40.30.10 7 98 8.6E-28 T 13-09-2016 PMA3_RS03040 0e9bf761e80fee87e77a02950d515dc9 258 SUPERFAMILY SSF63380 7 104 1.7E-22 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS22755 a31309b9cd1081c29a86d98223e35ada 256 Gene3D G3DSA:1.10.150.290 138 144 1.2E-28 T 13-09-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PMA3_RS22755 a31309b9cd1081c29a86d98223e35ada 256 Gene3D G3DSA:1.10.150.290 181 237 1.2E-28 T 13-09-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PMA3_RS22755 a31309b9cd1081c29a86d98223e35ada 256 PANTHER PTHR10108 3 235 2.1E-61 T 13-09-2016 PMA3_RS22755 a31309b9cd1081c29a86d98223e35ada 256 Gene3D G3DSA:3.40.50.150 3 137 1.3E-31 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS22755 a31309b9cd1081c29a86d98223e35ada 256 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 1 256 40.433 T 13-09-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PMA3_RS22755 a31309b9cd1081c29a86d98223e35ada 256 SUPERFAMILY SSF53335 9 192 1.14E-33 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS22755 a31309b9cd1081c29a86d98223e35ada 256 PANTHER PTHR10108:SF890 3 235 2.1E-61 T 13-09-2016 PMA3_RS22755 a31309b9cd1081c29a86d98223e35ada 256 Pfam PF13847 Methyltransferase domain 34 143 1.3E-16 T 13-09-2016 IPR025714 Methyltransferase domain PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 PANTHER PTHR10799:SF750 62 318 1.9E-30 T 13-09-2016 PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 PANTHER PTHR10799 62 318 1.9E-30 T 13-09-2016 PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 312 8.3E-45 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 Gene3D G3DSA:3.30.450.20 13 136 2.1E-14 T 13-09-2016 PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 316 8.3E-52 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 SUPERFAMILY SSF55073 160 318 2.43E-49 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 Gene3D G3DSA:3.30.70.270 156 319 9.1E-53 T 13-09-2016 PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 Pfam PF08448 PAS fold 19 137 6.0E-9 T 13-09-2016 IPR013656 PAS fold-4 PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 SMART SM00091 11 77 1.7E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 SUPERFAMILY SSF55785 12 99 2.44E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS00525 be5f062bbb14b4c4f598d5064bb1bda2 326 SMART SM00267 144 316 8.0E-63 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 PANTHER PTHR11262 3 104 5.4E-204 T 13-09-2016 PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 Gene3D G3DSA:1.10.8.60 333 445 3.4E-30 T 13-09-2016 PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 Gene3D G3DSA:1.10.8.10 211 241 3.8E-31 T 13-09-2016 PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 Gene3D G3DSA:1.10.8.10 110 176 3.8E-31 T 13-09-2016 PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 136 5.6E-8 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 SMART SM01086 333 433 5.1E-15 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 Pfam PF07724 AAA domain (Cdc48 subfamily) 175 327 4.2E-39 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 Gene3D G3DSA:3.40.50.300 3 109 4.7E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 Gene3D G3DSA:3.40.50.300 243 329 4.7E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 SUPERFAMILY SSF52540 3 443 2.59E-90 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 PANTHER PTHR11262:SF3 3 104 5.4E-204 T 13-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 SMART SM00382 48 330 6.6E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 445 9.2E-212 T 13-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 445 42.028 T 13-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 PANTHER PTHR11262 216 445 5.4E-204 T 13-09-2016 PMA3_RS01435 0e3f0ade41e29915fdf69ba6d3d812a5 445 PANTHER PTHR11262:SF3 216 445 5.4E-204 T 13-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PMA3_RS02000 6da751d911a3bdaebedacbd2618bfa58 512 SUPERFAMILY SSF109604 21 217 1.79E-21 T 13-09-2016 PMA3_RS02000 6da751d911a3bdaebedacbd2618bfa58 512 SUPERFAMILY SSF109604 246 275 1.79E-21 T 13-09-2016 PMA3_RS02000 6da751d911a3bdaebedacbd2618bfa58 512 Gene3D G3DSA:1.10.3150.10 21 246 2.5E-18 T 13-09-2016 IPR013976 Metal-dependent hydrolase HDOD PMA3_RS02000 6da751d911a3bdaebedacbd2618bfa58 512 Pfam PF08668 HDOD domain 27 207 4.7E-13 T 13-09-2016 IPR013976 Metal-dependent hydrolase HDOD PMA3_RS10500 9d219bdeec0b7de43313ae6b70cf93c7 149 PANTHER PTHR28620:SF2 22 148 9.1E-34 T 13-09-2016 PMA3_RS10500 9d219bdeec0b7de43313ae6b70cf93c7 149 SUPERFAMILY SSF51316 29 137 1.0E-30 T 13-09-2016 IPR011057 Mss4-like PMA3_RS10500 9d219bdeec0b7de43313ae6b70cf93c7 149 PANTHER PTHR28620 22 148 9.1E-34 T 13-09-2016 PMA3_RS10500 9d219bdeec0b7de43313ae6b70cf93c7 149 Gene3D G3DSA:3.90.1590.10 30 130 2.7E-20 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS10500 9d219bdeec0b7de43313ae6b70cf93c7 149 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 57 133 5.5E-10 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS05680 91fd5cb7802e7ef6f39070bbbada9840 62 PANTHER PTHR34984:SF1 1 62 4.8E-29 T 13-09-2016 PMA3_RS05680 91fd5cb7802e7ef6f39070bbbada9840 62 PANTHER PTHR34984 1 62 4.8E-29 T 13-09-2016 PMA3_RS05680 91fd5cb7802e7ef6f39070bbbada9840 62 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 2.9E-26 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS05680 91fd5cb7802e7ef6f39070bbbada9840 62 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 3.0E-21 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS05680 91fd5cb7802e7ef6f39070bbbada9840 62 Pfam PF02599 Global regulator protein family 1 53 1.4E-24 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS05680 91fd5cb7802e7ef6f39070bbbada9840 62 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.165 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS05680 91fd5cb7802e7ef6f39070bbbada9840 62 SUPERFAMILY SSF117130 1 55 9.29E-18 T 13-09-2016 PMA3_RS01605 bd681dd712ba630fa26f2ee4d0df7f04 398 PANTHER PTHR11712 92 398 4.7E-59 T 13-09-2016 PMA3_RS01605 bd681dd712ba630fa26f2ee4d0df7f04 398 SUPERFAMILY SSF53901 5 228 7.13E-40 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS01605 bd681dd712ba630fa26f2ee4d0df7f04 398 SMART SM00825 Beta-ketoacyl synthase 9 398 2.8E-9 T 13-09-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PMA3_RS01605 bd681dd712ba630fa26f2ee4d0df7f04 398 SUPERFAMILY SSF53901 204 398 1.51E-47 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS01605 bd681dd712ba630fa26f2ee4d0df7f04 398 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 46 229 3.6E-24 T 13-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PMA3_RS01605 bd681dd712ba630fa26f2ee4d0df7f04 398 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 239 339 5.1E-26 T 13-09-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PMA3_RS01605 bd681dd712ba630fa26f2ee4d0df7f04 398 Gene3D G3DSA:3.40.47.10 244 396 9.9E-52 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS01605 bd681dd712ba630fa26f2ee4d0df7f04 398 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 148 164 - T 13-09-2016 IPR018201 Beta-ketoacyl synthase, active site PMA3_RS01605 bd681dd712ba630fa26f2ee4d0df7f04 398 Gene3D G3DSA:3.40.47.10 44 228 2.0E-34 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS25855 73f9b971df070241070aad6e18f8eb92 294 Gene3D G3DSA:3.40.190.10 92 175 1.3E-23 T 13-09-2016 PMA3_RS25855 73f9b971df070241070aad6e18f8eb92 294 SUPERFAMILY SSF46785 1 113 2.64E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25855 73f9b971df070241070aad6e18f8eb92 294 SUPERFAMILY SSF53850 90 291 8.89E-39 T 13-09-2016 PMA3_RS25855 73f9b971df070241070aad6e18f8eb92 294 Gene3D G3DSA:3.40.190.10 176 265 2.6E-16 T 13-09-2016 PMA3_RS25855 73f9b971df070241070aad6e18f8eb92 294 PANTHER PTHR30419 1 291 2.3E-113 T 13-09-2016 PMA3_RS25855 73f9b971df070241070aad6e18f8eb92 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.3E-12 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS25855 73f9b971df070241070aad6e18f8eb92 294 PANTHER PTHR30419:SF2 1 291 2.3E-113 T 13-09-2016 PMA3_RS25855 73f9b971df070241070aad6e18f8eb92 294 Gene3D G3DSA:1.10.10.10 3 89 1.2E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25855 73f9b971df070241070aad6e18f8eb92 294 Pfam PF03466 LysR substrate binding domain 89 291 3.8E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 PIRSF PIRSF000429 1 394 2.7E-127 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 Pfam PF00108 Thiolase, N-terminal domain 6 262 6.3E-85 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 PANTHER PTHR18919 1 394 1.0E-182 T 13-09-2016 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 392 9.5E-136 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 13-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 Gene3D G3DSA:3.40.47.10 5 126 1.7E-64 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 Gene3D G3DSA:3.40.47.10 196 276 1.7E-64 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 Pfam PF02803 Thiolase, C-terminal domain 271 393 1.9E-44 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 SUPERFAMILY SSF53901 272 393 4.59E-44 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 13-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 PANTHER PTHR18919:SF95 1 394 1.0E-182 T 13-09-2016 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 SUPERFAMILY SSF53901 5 271 4.51E-82 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 Gene3D G3DSA:3.40.47.10 148 195 1.4E-63 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17220 74cd674a6f26d2edd058a4a47da55455 394 Gene3D G3DSA:3.40.47.10 278 393 1.4E-63 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS30290 4ef69f925b102d0c9f87525c8cef686f 409 PIRSF PIRSF036542 1 409 5.0E-207 T 13-09-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB PMA3_RS30290 4ef69f925b102d0c9f87525c8cef686f 409 PANTHER PTHR35793:SF2 2 409 3.3E-254 T 13-09-2016 PMA3_RS30290 4ef69f925b102d0c9f87525c8cef686f 409 PANTHER PTHR35793 2 409 3.3E-254 T 13-09-2016 PMA3_RS30290 4ef69f925b102d0c9f87525c8cef686f 409 Pfam PF07670 Nucleoside recognition 52 157 5.1E-7 T 13-09-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PMA3_RS11230 924bc48c2d4c80ac21012b57c3896880 368 PANTHER PTHR21327 1 366 2.6E-132 T 13-09-2016 PMA3_RS11230 924bc48c2d4c80ac21012b57c3896880 368 PANTHER PTHR21327:SF6 1 366 2.6E-132 T 13-09-2016 PMA3_RS11230 924bc48c2d4c80ac21012b57c3896880 368 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 1.8E-70 T 13-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS11230 924bc48c2d4c80ac21012b57c3896880 368 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.428 T 13-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS11230 924bc48c2d4c80ac21012b57c3896880 368 PIRSF PIRSF001259 1 368 6.4E-112 T 13-09-2016 PMA3_RS11230 924bc48c2d4c80ac21012b57c3896880 368 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 2.1E-79 T 13-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS11230 924bc48c2d4c80ac21012b57c3896880 368 Pfam PF00925 GTP cyclohydrolase II 208 366 2.5E-27 T 13-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PMA3_RS11230 924bc48c2d4c80ac21012b57c3896880 368 Gene3D G3DSA:3.90.870.10 1 210 5.0E-95 T 13-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PMA3_RS11230 924bc48c2d4c80ac21012b57c3896880 368 SUPERFAMILY SSF142695 204 367 2.09E-40 T 13-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PMA3_RS11230 924bc48c2d4c80ac21012b57c3896880 368 SUPERFAMILY SSF55821 2 202 1.65E-83 T 13-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PMA3_RS11385 ea7301cb2f943e6de6b93c5a86ee6630 194 Gene3D G3DSA:3.40.1000.10 81 153 4.5E-4 T 13-09-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 Gene3D G3DSA:3.30.565.10 258 425 1.2E-39 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 PANTHER PTHR24423:SF554 40 432 6.6E-177 T 13-09-2016 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 SMART SM00091 98 164 7.1E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 2.8E-18 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 SUPERFAMILY SSF55874 261 425 1.83E-40 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 Pfam PF11808 Domain of unknown function (DUF3329) 4 90 1.3E-26 T 13-09-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 Gene3D G3DSA:3.30.450.20 105 196 3.1E-10 T 13-09-2016 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 PANTHER PTHR24423 40 432 6.6E-177 T 13-09-2016 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 1.9E-138 T 13-09-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 3.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 3.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 3.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 3.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 Pfam PF00989 PAS fold 100 154 4.2E-7 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 SMART SM00388 205 272 2.3E-19 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 426 1.1E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 SUPERFAMILY SSF47384 191 272 8.83E-22 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 Gene3D G3DSA:1.10.287.130 197 257 5.4E-21 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 SUPERFAMILY SSF55785 109 204 1.08E-8 T 13-09-2016 IPR000014 PAS domain PMA3_RS29670 8060f5ce13f3fb8a0a4d53669ee928bf 440 SMART SM00387 317 429 6.3E-31 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23480 5e72e0abf292e2f78a022648e42e8e79 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS23480 5e72e0abf292e2f78a022648e42e8e79 439 Gene3D G3DSA:1.20.1250.20 244 434 5.1E-22 T 13-09-2016 PMA3_RS23480 5e72e0abf292e2f78a022648e42e8e79 439 Gene3D G3DSA:1.20.1250.20 26 236 1.9E-25 T 13-09-2016 PMA3_RS23480 5e72e0abf292e2f78a022648e42e8e79 439 Pfam PF00083 Sugar (and other) transporter 32 244 2.8E-30 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS23480 5e72e0abf292e2f78a022648e42e8e79 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 87 103 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS23480 5e72e0abf292e2f78a022648e42e8e79 439 SUPERFAMILY SSF103473 26 436 6.02E-66 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS23480 5e72e0abf292e2f78a022648e42e8e79 439 PANTHER PTHR23508 19 439 4.8E-251 T 13-09-2016 PMA3_RS23480 5e72e0abf292e2f78a022648e42e8e79 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS23480 5e72e0abf292e2f78a022648e42e8e79 439 PANTHER PTHR23508:SF4 19 439 4.8E-251 T 13-09-2016 PMA3_RS28090 91ff963da474a16ff7e5cfb5d217c85e 458 PANTHER PTHR30182:SF1 1 456 1.2E-235 T 13-09-2016 PMA3_RS28090 91ff963da474a16ff7e5cfb5d217c85e 458 Pfam PF03315 Serine dehydratase beta chain 4 155 8.5E-54 T 13-09-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PMA3_RS28090 91ff963da474a16ff7e5cfb5d217c85e 458 Gene3D G3DSA:3.30.1330.90 11 156 3.1E-50 T 13-09-2016 IPR029009 Allosteric substrate binding domain PMA3_RS28090 91ff963da474a16ff7e5cfb5d217c85e 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 454 3.4E-209 T 13-09-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PMA3_RS28090 91ff963da474a16ff7e5cfb5d217c85e 458 PANTHER PTHR30182 1 456 1.2E-235 T 13-09-2016 PMA3_RS28090 91ff963da474a16ff7e5cfb5d217c85e 458 Pfam PF03313 Serine dehydratase alpha chain 186 452 3.4E-102 T 13-09-2016 IPR005130 Serine dehydratase-like, alpha subunit PMA3_RS28090 91ff963da474a16ff7e5cfb5d217c85e 458 SUPERFAMILY SSF143548 17 155 1.31E-44 T 13-09-2016 IPR029009 Allosteric substrate binding domain PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 PANTHER PTHR18919 1 392 1.2E-230 T 13-09-2016 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 SUPERFAMILY SSF53901 272 392 6.09E-46 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 PIRSF PIRSF000429 1 392 2.8E-132 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 Gene3D G3DSA:3.40.47.10 194 276 1.0E-77 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 Gene3D G3DSA:3.40.47.10 3 123 1.0E-77 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.7E-104 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 Pfam PF02803 Thiolase, C-terminal domain 271 392 2.0E-52 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 SUPERFAMILY SSF53901 3 270 3.8E-88 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 PANTHER PTHR18919:SF95 1 392 1.2E-230 T 13-09-2016 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 13-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 13-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 Gene3D G3DSA:3.40.47.10 142 193 3.1E-69 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 Gene3D G3DSA:3.40.47.10 277 391 3.1E-69 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 2.8E-149 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS13895 3b7deb93aca8cfc500166f7eeeababda 392 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 13-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PMA3_RS07020 2aa705b176a7b3bc287122ec5fad2bf1 320 PANTHER PTHR11695 11 320 4.2E-111 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS07020 2aa705b176a7b3bc287122ec5fad2bf1 320 SUPERFAMILY SSF51735 106 278 4.68E-39 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS07020 2aa705b176a7b3bc287122ec5fad2bf1 320 Gene3D G3DSA:3.90.180.10 11 140 4.6E-45 T 13-09-2016 IPR011032 GroES-like PMA3_RS07020 2aa705b176a7b3bc287122ec5fad2bf1 320 SUPERFAMILY SSF50129 11 136 1.57E-36 T 13-09-2016 IPR011032 GroES-like PMA3_RS07020 2aa705b176a7b3bc287122ec5fad2bf1 320 SMART SM00829 6 313 7.3E-39 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS07020 2aa705b176a7b3bc287122ec5fad2bf1 320 Pfam PF00107 Zinc-binding dehydrogenase 146 259 6.5E-18 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS07020 2aa705b176a7b3bc287122ec5fad2bf1 320 Gene3D G3DSA:3.40.50.720 141 252 2.3E-17 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS07020 2aa705b176a7b3bc287122ec5fad2bf1 320 PANTHER PTHR11695:SF28 11 320 4.2E-111 T 13-09-2016 PMA3_RS07020 2aa705b176a7b3bc287122ec5fad2bf1 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 82 1.1E-7 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS07020 2aa705b176a7b3bc287122ec5fad2bf1 320 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 6 314 7.1E-121 T 13-09-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- PMA3_RS04390 c8a8969fe20945bfa357590e0307bb18 248 Gene3D G3DSA:3.20.20.70 6 242 6.2E-105 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS04390 c8a8969fe20945bfa357590e0307bb18 248 PANTHER PTHR30456 5 248 3.5E-138 T 13-09-2016 PMA3_RS04390 c8a8969fe20945bfa357590e0307bb18 248 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 246 121.333 T 13-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PMA3_RS04390 c8a8969fe20945bfa357590e0307bb18 248 PANTHER PTHR30456:SF0 5 248 3.5E-138 T 13-09-2016 PMA3_RS04390 c8a8969fe20945bfa357590e0307bb18 248 SUPERFAMILY SSF63892 7 242 1.1E-94 T 13-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PMA3_RS04390 c8a8969fe20945bfa357590e0307bb18 248 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 9 241 6.7E-99 T 13-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PMA3_RS04390 c8a8969fe20945bfa357590e0307bb18 248 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 242 1.2E-94 T 13-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PMA3_RS16490 bd3a7be5544d4726ed359fcb5edea401 435 SUPERFAMILY SSF56935 176 355 7.33E-6 T 13-09-2016 PMA3_RS16490 bd3a7be5544d4726ed359fcb5edea401 435 Gene3D G3DSA:2.40.160.10 28 435 9.0E-140 T 13-09-2016 IPR023614 Porin domain PMA3_RS16490 bd3a7be5544d4726ed359fcb5edea401 435 PANTHER PTHR34596 275 435 1.5E-134 T 13-09-2016 PMA3_RS16490 bd3a7be5544d4726ed359fcb5edea401 435 PANTHER PTHR34596 7 259 1.5E-134 T 13-09-2016 PMA3_RS16490 bd3a7be5544d4726ed359fcb5edea401 435 Pfam PF03573 outer membrane porin, OprD family 23 433 5.1E-138 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS11175 42ea668311efae1f7a15eb8392fbee73 249 SUPERFAMILY SSF55785 114 237 9.27E-15 T 13-09-2016 IPR000014 PAS domain PMA3_RS11175 42ea668311efae1f7a15eb8392fbee73 249 Gene3D G3DSA:3.30.450.20 139 242 4.5E-15 T 13-09-2016 PMA3_RS11175 42ea668311efae1f7a15eb8392fbee73 249 SMART SM00091 129 200 0.15 T 13-09-2016 IPR000014 PAS domain PMA3_RS11175 42ea668311efae1f7a15eb8392fbee73 249 SMART SM00091 11 74 21.0 T 13-09-2016 IPR000014 PAS domain PMA3_RS11175 42ea668311efae1f7a15eb8392fbee73 249 Gene3D G3DSA:3.30.450.20 51 138 1.6E-11 T 13-09-2016 PMA3_RS11175 42ea668311efae1f7a15eb8392fbee73 249 SUPERFAMILY SSF55785 16 119 4.79E-11 T 13-09-2016 IPR000014 PAS domain PMA3_RS11175 42ea668311efae1f7a15eb8392fbee73 249 Pfam PF08447 PAS fold 155 241 7.9E-14 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS11175 42ea668311efae1f7a15eb8392fbee73 249 Pfam PF08447 PAS fold 52 99 1.0E-6 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 PANTHER PTHR31527:SF0 177 427 3.9E-24 T 13-09-2016 PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 Gene3D G3DSA:3.30.70.1400 470 533 8.3E-19 T 13-09-2016 PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 Pfam PF01571 Aminomethyltransferase folate-binding domain 407 665 8.6E-72 T 13-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 SUPERFAMILY SSF103025 402 685 1.26E-80 T 13-09-2016 PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 Gene3D G3DSA:3.30.1360.120 540 643 4.1E-24 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 SUPERFAMILY SSF101790 692 779 1.16E-18 T 13-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 PANTHER PTHR31527 177 427 3.9E-24 T 13-09-2016 PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 Pfam PF09347 Domain of unknown function (DUF1989) 184 352 7.9E-42 T 13-09-2016 IPR018959 Domain of unknown function DUF1989 PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 675 767 9.4E-21 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 Gene3D G3DSA:3.30.1360.120 402 469 4.4E-11 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS11130 2ee5b2e6d5391dd51a1c841643bd28ce 780 Gene3D G3DSA:2.40.30.110 690 778 5.9E-18 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS01340 67650c8e7e92dc33282d69b39f3f20ef 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS01340 67650c8e7e92dc33282d69b39f3f20ef 244 SMART SM00382 30 217 4.0E-17 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS01340 67650c8e7e92dc33282d69b39f3f20ef 244 Pfam PF00005 ABC transporter 21 169 4.5E-37 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS01340 67650c8e7e92dc33282d69b39f3f20ef 244 PANTHER PTHR24220:SF474 3 244 1.7E-137 T 13-09-2016 PMA3_RS01340 67650c8e7e92dc33282d69b39f3f20ef 244 PANTHER PTHR24220 3 244 1.7E-137 T 13-09-2016 PMA3_RS01340 67650c8e7e92dc33282d69b39f3f20ef 244 PIRSF PIRSF039085 1 244 6.3E-106 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS01340 67650c8e7e92dc33282d69b39f3f20ef 244 Gene3D G3DSA:3.40.50.300 1 240 5.3E-83 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01340 67650c8e7e92dc33282d69b39f3f20ef 244 SUPERFAMILY SSF52540 1 239 1.27E-81 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07765 db49ace43a587835197cc759cd7046dc 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 19.287 T 13-09-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PMA3_RS07765 db49ace43a587835197cc759cd7046dc 84 PANTHER PTHR33404 1 83 2.3E-26 T 13-09-2016 PMA3_RS07765 db49ace43a587835197cc759cd7046dc 84 SUPERFAMILY SSF55229 33 83 7.59E-16 T 13-09-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PMA3_RS07765 db49ace43a587835197cc759cd7046dc 84 Gene3D G3DSA:3.30.1070.10 33 83 5.3E-21 T 13-09-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PMA3_RS07765 db49ace43a587835197cc759cd7046dc 84 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 1.9E-25 T 13-09-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PMA3_RS07765 db49ace43a587835197cc759cd7046dc 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.0E-30 T 13-09-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PMA3_RS23050 508ec8544d3a80a30fdc10694046a55e 221 PANTHER PTHR30246:SF0 8 221 8.4E-97 T 13-09-2016 PMA3_RS23050 508ec8544d3a80a30fdc10694046a55e 221 Gene3D G3DSA:3.20.20.70 18 220 1.2E-67 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS23050 508ec8544d3a80a30fdc10694046a55e 221 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 137 150 - T 13-09-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PMA3_RS23050 508ec8544d3a80a30fdc10694046a55e 221 PANTHER PTHR30246 8 221 8.4E-97 T 13-09-2016 PMA3_RS23050 508ec8544d3a80a30fdc10694046a55e 221 SUPERFAMILY SSF51569 17 219 5.13E-62 T 13-09-2016 PMA3_RS23050 508ec8544d3a80a30fdc10694046a55e 221 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 18 218 6.3E-75 T 13-09-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PMA3_RS23050 508ec8544d3a80a30fdc10694046a55e 221 Pfam PF01081 KDPG and KHG aldolase 17 212 5.5E-86 T 13-09-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PMA3_RS23050 508ec8544d3a80a30fdc10694046a55e 221 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 49 58 - T 13-09-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 PMA3_RS09500 78e111fb86d3c91c7a436cbffe76067b 251 PANTHER PTHR18966 5 246 1.5E-57 T 13-09-2016 PMA3_RS09500 78e111fb86d3c91c7a436cbffe76067b 251 SMART SM00062 25 249 1.4E-61 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS09500 78e111fb86d3c91c7a436cbffe76067b 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 246 6.8E-64 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS09500 78e111fb86d3c91c7a436cbffe76067b 251 Gene3D G3DSA:3.40.190.10 23 111 2.7E-47 T 13-09-2016 PMA3_RS09500 78e111fb86d3c91c7a436cbffe76067b 251 Gene3D G3DSA:3.40.190.10 208 250 2.7E-47 T 13-09-2016 PMA3_RS09500 78e111fb86d3c91c7a436cbffe76067b 251 Gene3D G3DSA:3.40.190.10 114 203 2.4E-22 T 13-09-2016 PMA3_RS09500 78e111fb86d3c91c7a436cbffe76067b 251 SUPERFAMILY SSF53850 1 250 1.21E-70 T 13-09-2016 PMA3_RS09500 78e111fb86d3c91c7a436cbffe76067b 251 PANTHER PTHR18966:SF152 5 246 1.5E-57 T 13-09-2016 PMA3_RS09500 78e111fb86d3c91c7a436cbffe76067b 251 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 13-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PMA3_RS27265 7ad73dd1343f8ee9aec3d6cb28450f4e 211 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 13-09-2016 IPR019926 Ribosomal protein L3, conserved site PMA3_RS27265 7ad73dd1343f8ee9aec3d6cb28450f4e 211 Gene3D G3DSA:2.40.30.10 158 207 4.9E-9 T 13-09-2016 PMA3_RS27265 7ad73dd1343f8ee9aec3d6cb28450f4e 211 Gene3D G3DSA:2.40.30.10 4 33 4.9E-9 T 13-09-2016 PMA3_RS27265 7ad73dd1343f8ee9aec3d6cb28450f4e 211 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 207 39.716 T 13-09-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27265 7ad73dd1343f8ee9aec3d6cb28450f4e 211 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 204 1.5E-90 T 13-09-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27265 7ad73dd1343f8ee9aec3d6cb28450f4e 211 SUPERFAMILY SSF50447 1 208 1.32E-81 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS27265 7ad73dd1343f8ee9aec3d6cb28450f4e 211 Pfam PF00297 Ribosomal protein L3 46 182 3.7E-17 T 13-09-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27265 7ad73dd1343f8ee9aec3d6cb28450f4e 211 PANTHER PTHR11229 1 208 1.3E-119 T 13-09-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27265 7ad73dd1343f8ee9aec3d6cb28450f4e 211 Gene3D G3DSA:4.10.960.10 78 157 2.4E-34 T 13-09-2016 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 PANTHER PTHR32282:SF5 1 311 3.4E-263 T 13-09-2016 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 PANTHER PTHR32282:SF5 650 813 3.4E-263 T 13-09-2016 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 SUPERFAMILY SSF53955 44 256 3.66E-76 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 Gene3D G3DSA:2.40.50.140 344 417 8.8E-17 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 SUPERFAMILY SSF56601 650 791 3.42E-126 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 SUPERFAMILY SSF56601 418 606 3.42E-126 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 SUPERFAMILY SSF56601 212 234 3.42E-126 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 SUPERFAMILY SSF56601 263 314 3.42E-126 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 Pfam PF17092 Penicillin-binding protein OB-like domain 317 421 1.7E-23 T 13-09-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 Pfam PF00912 Transglycosylase 57 230 6.8E-63 T 13-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 PANTHER PTHR32282 1 311 3.4E-263 T 13-09-2016 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 PANTHER PTHR32282 650 813 3.4E-263 T 13-09-2016 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 Gene3D G3DSA:1.10.3810.10 57 233 2.2E-71 T 13-09-2016 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 744 2.9E-181 T 13-09-2016 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 PANTHER PTHR32282 417 608 3.4E-263 T 13-09-2016 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 PANTHER PTHR32282:SF5 417 608 3.4E-263 T 13-09-2016 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 Pfam PF00905 Penicillin binding protein transpeptidase domain 423 719 8.8E-29 T 13-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 Gene3D G3DSA:3.40.710.10 418 607 7.7E-133 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 Gene3D G3DSA:3.40.710.10 651 790 7.7E-133 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS01480 a2443f77238cd02234d40aa3d7e0cbc1 815 Gene3D G3DSA:3.40.710.10 234 314 7.7E-133 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 SUPERFAMILY SSF50494 51 272 5.65E-64 T 13-09-2016 IPR009003 Peptidase S1, PA clan PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 Pfam PF13365 Trypsin-like peptidase domain 107 241 4.4E-30 T 13-09-2016 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 5.5E-55 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 PRINTS PR00834 HtrA/DegQ protease family signature 137 157 5.5E-55 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 PRINTS PR00834 HtrA/DegQ protease family signature 320 332 5.5E-55 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 5.5E-55 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 PRINTS PR00834 HtrA/DegQ protease family signature 116 128 5.5E-55 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 5.5E-55 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 SUPERFAMILY SSF50156 239 363 5.92E-25 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 Gene3D G3DSA:2.30.42.10 282 375 2.0E-25 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 PANTHER PTHR22939:SF93 1 375 5.6E-165 T 13-09-2016 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 SMART SM00228 280 362 4.3E-16 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 Gene3D G3DSA:2.40.10.10 53 168 1.6E-37 T 13-09-2016 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 PANTHER PTHR22939 1 375 5.6E-165 T 13-09-2016 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 Gene3D G3DSA:2.40.10.10 169 281 3.3E-43 T 13-09-2016 PMA3_RS25025 3d9a8aef790f8ac94d180ba34289d1fd 388 Pfam PF13180 PDZ domain 280 367 6.8E-15 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 PANTHER PTHR32552 117 132 0.0 T 13-09-2016 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 PANTHER PTHR32552:SF6 117 132 0.0 T 13-09-2016 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 SMART SM00965 68 119 2.5E-11 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 SUPERFAMILY SSF56935 152 809 1.63E-120 T 13-09-2016 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 Pfam PF00593 TonB dependent receptor 566 804 5.8E-35 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 Gene3D G3DSA:2.170.130.10 137 262 1.8E-31 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 159 809 2.6E-112 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 Pfam PF07660 Secretin and TonB N terminus short domain 69 118 4.5E-8 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 PANTHER PTHR32552 149 809 0.0 T 13-09-2016 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 Pfam PF07715 TonB-dependent Receptor Plug Domain 158 255 3.8E-18 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 PANTHER PTHR32552:SF6 149 809 0.0 T 13-09-2016 PMA3_RS24745 e63d794679988a2e4c7227ca81635f27 809 Gene3D G3DSA:2.40.170.20 283 809 6.6E-140 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS23215 79864889d6eb7984361422aa6b6e3d38 230 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 10 227 56.83 T 13-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PMA3_RS23215 79864889d6eb7984361422aa6b6e3d38 230 PANTHER PTHR11587:SF3 1 229 6.2E-112 T 13-09-2016 PMA3_RS23215 79864889d6eb7984361422aa6b6e3d38 230 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 12 214 6.8E-62 T 13-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PMA3_RS23215 79864889d6eb7984361422aa6b6e3d38 230 SUPERFAMILY SSF52402 10 229 7.5E-65 T 13-09-2016 PMA3_RS23215 79864889d6eb7984361422aa6b6e3d38 230 Gene3D G3DSA:3.40.50.620 9 229 3.9E-81 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS23215 79864889d6eb7984361422aa6b6e3d38 230 PIRSF PIRSF006293 8 230 1.7E-79 T 13-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PMA3_RS23215 79864889d6eb7984361422aa6b6e3d38 230 Pfam PF06508 Queuosine biosynthesis protein QueC 11 221 3.1E-80 T 13-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PMA3_RS23215 79864889d6eb7984361422aa6b6e3d38 230 PANTHER PTHR11587 1 229 6.2E-112 T 13-09-2016 PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 PANTHER PTHR30154 1 144 3.6E-31 T 13-09-2016 PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 SMART SM00344 5 113 4.6E-22 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 Gene3D G3DSA:3.30.70.920 78 143 1.3E-13 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 Pfam PF13404 AsnC-type helix-turn-helix domain 5 46 2.5E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 Pfam PF01037 Lrp/AsnC ligand binding domain 83 142 2.0E-14 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 Gene3D G3DSA:1.10.10.10 4 56 2.8E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 4.9E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 4.9E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 4.9E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 13-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 SUPERFAMILY SSF54909 69 144 3.08E-13 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS26380 3411d131c3656986ba393c07570fc898 145 SUPERFAMILY SSF46785 4 59 2.25E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25875 fe3ca49be6dc20fe83a4d94738376c4b 295 PANTHER PTHR22981 1 293 3.1E-122 T 13-09-2016 PMA3_RS25875 fe3ca49be6dc20fe83a4d94738376c4b 295 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 292 5.4E-129 T 13-09-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 PMA3_RS25875 fe3ca49be6dc20fe83a4d94738376c4b 295 SUPERFAMILY SSF51735 1 161 6.17E-44 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS25875 fe3ca49be6dc20fe83a4d94738376c4b 295 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 13-09-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 PMA3_RS25875 fe3ca49be6dc20fe83a4d94738376c4b 295 SUPERFAMILY SSF48179 162 293 3.17E-41 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS25875 fe3ca49be6dc20fe83a4d94738376c4b 295 Gene3D G3DSA:3.40.50.720 1 162 2.1E-57 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS25875 fe3ca49be6dc20fe83a4d94738376c4b 295 PIRSF PIRSF000103 1 294 2.3E-76 T 13-09-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PMA3_RS25875 fe3ca49be6dc20fe83a4d94738376c4b 295 Gene3D G3DSA:1.10.1040.10 163 293 6.4E-48 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS25875 fe3ca49be6dc20fe83a4d94738376c4b 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 289 1.5E-36 T 13-09-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PMA3_RS25875 fe3ca49be6dc20fe83a4d94738376c4b 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 1.9E-45 T 13-09-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PMA3_RS26580 ee6438711d1ef04deb8a4a3d8d334025 336 PANTHER PTHR30163 1 334 2.6E-164 T 13-09-2016 IPR011757 Lytic transglycosylase MltB PMA3_RS26580 ee6438711d1ef04deb8a4a3d8d334025 336 Gene3D G3DSA:1.10.530.10 79 135 9.6E-58 T 13-09-2016 PMA3_RS26580 ee6438711d1ef04deb8a4a3d8d334025 336 Gene3D G3DSA:1.10.530.10 217 332 9.6E-58 T 13-09-2016 PMA3_RS26580 ee6438711d1ef04deb8a4a3d8d334025 336 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 40 329 2.9E-120 T 13-09-2016 IPR011757 Lytic transglycosylase MltB PMA3_RS26580 ee6438711d1ef04deb8a4a3d8d334025 336 PANTHER PTHR30163:SF0 1 334 2.6E-164 T 13-09-2016 PMA3_RS26580 ee6438711d1ef04deb8a4a3d8d334025 336 Pfam PF13406 Transglycosylase SLT domain 36 327 1.2E-102 T 13-09-2016 IPR031304 Transglycosylase SLT domain 2 PMA3_RS26580 ee6438711d1ef04deb8a4a3d8d334025 336 SUPERFAMILY SSF53955 27 330 7.12E-96 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS13275 691398abe69651b03b1cbc64b7bc2f83 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 264 17.893 T 13-09-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PMA3_RS13275 691398abe69651b03b1cbc64b7bc2f83 276 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 2.6E-78 T 13-09-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PMA3_RS13275 691398abe69651b03b1cbc64b7bc2f83 276 PANTHER PTHR30622:SF3 2 272 7.1E-136 T 13-09-2016 PMA3_RS13275 691398abe69651b03b1cbc64b7bc2f83 276 PANTHER PTHR30622 2 272 7.1E-136 T 13-09-2016 PMA3_RS13275 691398abe69651b03b1cbc64b7bc2f83 276 Pfam PF02673 Bacitracin resistance protein BacA 9 258 2.4E-78 T 13-09-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PMA3_RS25605 bd41d784437abafa92b432d4aeba5d4f 104 Hamap MF_00460 Protein RnfH [rnfH]. 6 98 23.981 T 13-09-2016 IPR005346 RnfH protein PMA3_RS25605 bd41d784437abafa92b432d4aeba5d4f 104 Pfam PF03658 RnfH family Ubiquitin 6 90 5.0E-32 T 13-09-2016 IPR005346 RnfH protein PMA3_RS25605 bd41d784437abafa92b432d4aeba5d4f 104 PANTHER PTHR37483:SF1 3 104 1.0E-33 T 13-09-2016 PMA3_RS25605 bd41d784437abafa92b432d4aeba5d4f 104 PANTHER PTHR37483 3 104 1.0E-33 T 13-09-2016 PMA3_RS25605 bd41d784437abafa92b432d4aeba5d4f 104 SUPERFAMILY SSF54285 5 82 1.12E-21 T 13-09-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PMA3_RS25605 bd41d784437abafa92b432d4aeba5d4f 104 Gene3D G3DSA:3.10.20.280 3 92 1.7E-33 T 13-09-2016 IPR005346 RnfH protein PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 SUPERFAMILY SSF46785 9 71 1.1E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 Pfam PF07729 FCD domain 103 230 6.8E-18 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 Gene3D G3DSA:1.10.10.10 7 71 1.5E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 SMART SM00895 103 232 1.8E-12 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 PANTHER PTHR11751:SF403 15 80 7.4E-17 T 13-09-2016 PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 PANTHER PTHR11751 15 80 7.4E-17 T 13-09-2016 PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 PANTHER PTHR11751:SF403 96 120 7.4E-17 T 13-09-2016 PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 SMART SM00345 17 78 6.2E-14 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 Gene3D G3DSA:1.20.120.530 102 239 3.3E-17 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 71 3.9E-15 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 PANTHER PTHR11751 96 120 7.4E-17 T 13-09-2016 PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 SUPERFAMILY SSF48008 102 238 7.06E-18 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.3E-7 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12665 0c049979eaa20749886cb824c9d48ad1 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.3E-7 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS04060 0e02f4e6c265ec2f509dd1c2a39e02af 205 PANTHER PTHR11260:SF44 5 205 7.0E-108 T 13-09-2016 PMA3_RS04060 0e02f4e6c265ec2f509dd1c2a39e02af 205 PANTHER PTHR11260 5 205 7.0E-108 T 13-09-2016 PMA3_RS04060 0e02f4e6c265ec2f509dd1c2a39e02af 205 Gene3D G3DSA:3.40.30.10 6 101 2.4E-27 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS04060 0e02f4e6c265ec2f509dd1c2a39e02af 205 SUPERFAMILY SSF52833 7 86 3.47E-21 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS04060 0e02f4e6c265ec2f509dd1c2a39e02af 205 SUPERFAMILY SSF47616 78 204 1.24E-26 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS04060 0e02f4e6c265ec2f509dd1c2a39e02af 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 191 6.4E-7 T 13-09-2016 IPR004046 Glutathione S-transferase, C-terminal PMA3_RS04060 0e02f4e6c265ec2f509dd1c2a39e02af 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 83 3.1E-18 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS04060 0e02f4e6c265ec2f509dd1c2a39e02af 205 Gene3D G3DSA:1.20.1050.10 102 198 4.0E-13 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS28135 500f32ae06d0a3c886ad75039633bfc0 480 Pfam PF01523 Putative modulator of DNA gyrase 23 324 3.1E-40 T 13-09-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS28135 500f32ae06d0a3c886ad75039633bfc0 480 SUPERFAMILY SSF111283 4 475 4.32E-93 T 13-09-2016 PMA3_RS28135 500f32ae06d0a3c886ad75039633bfc0 480 PANTHER PTHR30624 13 480 1.1E-161 T 13-09-2016 PMA3_RS28135 500f32ae06d0a3c886ad75039633bfc0 480 PANTHER PTHR30624:SF10 13 480 1.1E-161 T 13-09-2016 PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 Gene3D G3DSA:3.40.50.1100 131 202 1.1E-6 T 13-09-2016 PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 PANTHER PTHR10314:SF1 53 329 1.5E-70 T 13-09-2016 PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 PANTHER PTHR10314:SF1 360 413 1.5E-70 T 13-09-2016 PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 PANTHER PTHR10314:SF1 25 36 1.5E-70 T 13-09-2016 PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 PANTHER PTHR10314 25 36 1.5E-70 T 13-09-2016 PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 Gene3D G3DSA:3.90.1380.10 1 85 1.2E-22 T 13-09-2016 IPR029144 Threonine synthase, N-terminal PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 TIGRFAM TIGR00260 thrC: threonine synthase 75 394 1.7E-50 T 13-09-2016 IPR004450 Threonine synthase-like PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 Gene3D G3DSA:3.40.50.1100 203 422 1.5E-55 T 13-09-2016 PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 Pfam PF14821 Threonine synthase N terminus 3 80 9.1E-22 T 13-09-2016 IPR029144 Threonine synthase, N-terminal PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 SUPERFAMILY SSF53686 1 422 2.54E-110 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 90 399 8.9E-22 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 PANTHER PTHR10314 53 329 1.5E-70 T 13-09-2016 PMA3_RS26385 843ef0b23121c0423a1badcfc2ce5bdf 462 PANTHER PTHR10314 360 413 1.5E-70 T 13-09-2016 PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 1.3E-8 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 PANTHER PTHR19370:SF98 5 258 6.1E-127 T 13-09-2016 PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 PANTHER PTHR19370 5 258 6.1E-127 T 13-09-2016 PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 Gene3D G3DSA:3.40.50.80 99 258 1.0E-48 T 13-09-2016 PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 Pfam PF00970 Oxidoreductase FAD-binding domain 17 99 3.6E-8 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 Gene3D G3DSA:2.40.30.10 6 98 2.2E-31 T 13-09-2016 PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 SUPERFAMILY SSF63380 6 100 5.02E-25 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 52 59 3.0E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 112 131 3.0E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 216 224 3.0E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS05045 d15acad334d72086cd1e7614ca8414f6 259 SUPERFAMILY SSF52343 103 257 1.57E-43 T 13-09-2016 PMA3_RS02970 a4711182d8f711458a30bc0365ec597c 303 PANTHER PTHR30537 1 303 2.1E-103 T 13-09-2016 PMA3_RS02970 a4711182d8f711458a30bc0365ec597c 303 PANTHER PTHR30537:SF5 1 303 2.1E-103 T 13-09-2016 PMA3_RS02970 a4711182d8f711458a30bc0365ec597c 303 Gene3D G3DSA:3.40.190.10 184 267 5.6E-15 T 13-09-2016 PMA3_RS02970 a4711182d8f711458a30bc0365ec597c 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.4E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS02970 a4711182d8f711458a30bc0365ec597c 303 Gene3D G3DSA:3.40.190.10 98 183 5.5E-25 T 13-09-2016 PMA3_RS02970 a4711182d8f711458a30bc0365ec597c 303 Gene3D G3DSA:1.10.10.10 8 89 6.5E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS02970 a4711182d8f711458a30bc0365ec597c 303 Pfam PF03466 LysR substrate binding domain 94 301 1.9E-43 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS02970 a4711182d8f711458a30bc0365ec597c 303 SUPERFAMILY SSF53850 94 302 6.05E-44 T 13-09-2016 PMA3_RS02970 a4711182d8f711458a30bc0365ec597c 303 SUPERFAMILY SSF46785 9 117 3.35E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 411 1.0E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 SMART SM00388 203 268 0.0015 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 PANTHER PTHR24423 179 412 1.4E-36 T 13-09-2016 PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 359 1.4E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 373 1.4E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 1.4E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 392 1.4E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 Gene3D G3DSA:3.30.565.10 275 414 1.0E-26 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 SUPERFAMILY SSF47384 201 263 8.44E-6 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 SMART SM00387 310 414 7.0E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS25285 c2ca213ac45d585d14181693c04f0906 420 SUPERFAMILY SSF55874 257 413 3.01E-31 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS03435 57f754357221de6a97064ccd9bbd2d73 338 PANTHER PTHR11061:SF34 8 316 8.7E-76 T 13-09-2016 PMA3_RS03435 57f754357221de6a97064ccd9bbd2d73 338 Gene3D G3DSA:3.40.50.150 44 337 2.9E-53 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS03435 57f754357221de6a97064ccd9bbd2d73 338 SUPERFAMILY SSF53335 8 324 2.14E-47 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS03435 57f754357221de6a97064ccd9bbd2d73 338 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 31 210 4.9E-23 T 13-09-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PMA3_RS03435 57f754357221de6a97064ccd9bbd2d73 338 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 237 303 9.2E-5 T 13-09-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PMA3_RS03435 57f754357221de6a97064ccd9bbd2d73 338 PANTHER PTHR11061 8 316 8.7E-76 T 13-09-2016 PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 3 590 0.0 T 13-09-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 SUPERFAMILY SSF52467 186 376 9.63E-49 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 SUPERFAMILY SSF52518 3 183 4.87E-50 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 Gene3D G3DSA:3.40.50.970 2 181 6.3E-61 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 4.3E-33 T 13-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 Gene3D G3DSA:3.40.50.1220 190 358 1.8E-52 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 7.4E-37 T 13-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 SUPERFAMILY SSF52518 369 568 2.03E-50 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 Gene3D G3DSA:3.40.50.970 360 574 3.1E-58 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 2.8E-53 T 13-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 PANTHER PTHR18968 1 587 0.0 T 13-09-2016 PMA3_RS21350 6b17f145b2c478a34eed58efcebcc81a 591 PANTHER PTHR18968:SF14 1 587 0.0 T 13-09-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 Gene3D G3DSA:3.40.190.10 106 174 3.6E-14 T 13-09-2016 PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.6E-20 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 Pfam PF03466 LysR substrate binding domain 92 289 1.0E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 SUPERFAMILY SSF53850 93 290 7.7E-36 T 13-09-2016 PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 PANTHER PTHR30126:SF17 3 291 1.4E-132 T 13-09-2016 PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 Gene3D G3DSA:1.10.10.10 3 77 1.9E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 PANTHER PTHR30126 3 291 1.4E-132 T 13-09-2016 PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 Gene3D G3DSA:3.40.190.10 175 255 4.5E-22 T 13-09-2016 PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 7 285 3.3E-109 T 13-09-2016 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type PMA3_RS19075 aa84f53aee9777a098fd5eb7f22dbdf8 291 SUPERFAMILY SSF46785 3 84 1.33E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 PANTHER PTHR24220 50 280 2.2E-142 T 13-09-2016 PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 Gene3D G3DSA:3.10.580.10 305 355 6.8E-6 T 13-09-2016 PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 PANTHER PTHR24220:SF374 50 280 2.2E-142 T 13-09-2016 PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 PANTHER PTHR24220:SF374 14 24 2.2E-142 T 13-09-2016 PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 Pfam PF00571 CBS domain 305 350 1.8E-5 T 13-09-2016 IPR000644 CBS domain PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 SUPERFAMILY SSF52540 52 280 8.07E-76 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 SMART SM00382 62 259 8.2E-17 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 SUPERFAMILY SSF54631 302 355 5.94E-7 T 13-09-2016 PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 Pfam PF00005 ABC transporter 54 201 4.1E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 Gene3D G3DSA:3.40.50.300 50 274 1.6E-77 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 PANTHER PTHR24220 14 24 2.2E-142 T 13-09-2016 PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 51 343 3.0E-108 T 13-09-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PMA3_RS10275 e306b9af1054465a6a1409a45cb518f4 372 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 370 2.2E-218 T 13-09-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 PANTHER PTHR11695 16 109 5.3E-210 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 SUPERFAMILY SSF50129 2 188 1.25E-70 T 13-09-2016 IPR011032 GroES-like PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 SUPERFAMILY SSF51735 161 334 1.28E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 155 1.6E-22 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 Gene3D G3DSA:3.40.50.720 191 310 2.5E-42 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 PANTHER PTHR11695:SF560 16 109 5.3E-210 T 13-09-2016 PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 Pfam PF00107 Zinc-binding dehydrogenase 198 325 2.6E-24 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 PANTHER PTHR11695:SF560 129 370 5.3E-210 T 13-09-2016 PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 Gene3D G3DSA:3.90.180.10 2 190 1.9E-67 T 13-09-2016 IPR011032 GroES-like PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 PANTHER PTHR11695 129 370 5.3E-210 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS04945 fff6c821e55356a5222ed077ed615604 370 SUPERFAMILY SSF50129 320 370 8.0E-11 T 13-09-2016 IPR011032 GroES-like PMA3_RS14315 6dfe7ff843a00304cdeb08628ec3f5bd 439 SUPERFAMILY SSF51905 36 258 1.64E-30 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14315 6dfe7ff843a00304cdeb08628ec3f5bd 439 SUPERFAMILY SSF51905 356 413 1.64E-30 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14315 6dfe7ff843a00304cdeb08628ec3f5bd 439 Pfam PF01266 FAD dependent oxidoreductase 37 393 6.1E-41 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS14315 6dfe7ff843a00304cdeb08628ec3f5bd 439 PANTHER PTHR13847:SF196 1 421 8.7E-112 T 13-09-2016 PMA3_RS14315 6dfe7ff843a00304cdeb08628ec3f5bd 439 Gene3D G3DSA:3.50.50.60 179 257 2.6E-32 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14315 6dfe7ff843a00304cdeb08628ec3f5bd 439 Gene3D G3DSA:3.50.50.60 31 126 2.6E-32 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14315 6dfe7ff843a00304cdeb08628ec3f5bd 439 Gene3D G3DSA:3.50.50.60 356 404 2.6E-32 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14315 6dfe7ff843a00304cdeb08628ec3f5bd 439 PANTHER PTHR13847 1 421 8.7E-112 T 13-09-2016 PMA3_RS08655 12a878625a846536bd1eccd27c6f27ea 245 PANTHER PTHR11904:SF1 5 244 1.1E-82 T 13-09-2016 PMA3_RS08655 12a878625a846536bd1eccd27c6f27ea 245 Pfam PF01048 Phosphorylase superfamily 4 243 1.2E-42 T 13-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PMA3_RS08655 12a878625a846536bd1eccd27c6f27ea 245 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 245 33.198 T 13-09-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 PMA3_RS08655 12a878625a846536bd1eccd27c6f27ea 245 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 50 90 - T 13-09-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 PMA3_RS08655 12a878625a846536bd1eccd27c6f27ea 245 PANTHER PTHR11904 5 244 1.1E-82 T 13-09-2016 IPR001369 PNP/MTAP phosphorylase PMA3_RS08655 12a878625a846536bd1eccd27c6f27ea 245 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 244 7.9E-90 T 13-09-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 PMA3_RS08655 12a878625a846536bd1eccd27c6f27ea 245 SUPERFAMILY SSF53167 3 244 3.48E-77 T 13-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PMA3_RS08655 12a878625a846536bd1eccd27c6f27ea 245 Gene3D G3DSA:3.40.50.1580 4 244 2.2E-74 T 13-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 17 628 45.78 T 13-09-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 Pfam PF02779 Transketolase, pyrimidine binding domain 328 487 2.6E-38 T 13-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 PANTHER PTHR11624:SF20 31 225 4.1E-304 T 13-09-2016 PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 21 627 3.5E-266 T 13-09-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 Gene3D G3DSA:3.40.50.970 33 208 1.0E-75 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 Gene3D G3DSA:3.40.50.970 249 342 1.0E-75 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 SUPERFAMILY SSF52922 499 627 3.4E-31 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 18 289 5.0E-120 T 13-09-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 PANTHER PTHR11624:SF20 248 628 4.1E-304 T 13-09-2016 PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 PANTHER PTHR11624 31 225 4.1E-304 T 13-09-2016 IPR033247 Transketolase family PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 Pfam PF02780 Transketolase, C-terminal domain 503 619 7.6E-27 T 13-09-2016 IPR033248 Transketolase, C-terminal domain PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 Gene3D G3DSA:3.40.50.970 343 503 4.7E-32 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 PANTHER PTHR11624 248 628 4.1E-304 T 13-09-2016 IPR033247 Transketolase family PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 SUPERFAMILY SSF52518 14 206 5.26E-77 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 SUPERFAMILY SSF52518 250 389 5.26E-77 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 SMART SM00861 327 491 8.5E-62 T 13-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 ProSitePatterns PS00802 Transketolase signature 2. 433 449 - T 13-09-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 Gene3D G3DSA:3.40.50.920 504 627 1.1E-34 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS26900 e5838931bf89863795de85405ae168f5 632 SUPERFAMILY SSF52518 325 512 5.58E-57 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS29275 6bf2dfbcdd7f0fd2612c96cc171ee686 110 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 13-09-2016 IPR020895 Frataxin conserved site PMA3_RS29275 6bf2dfbcdd7f0fd2612c96cc171ee686 110 SMART SM01219 3 108 1.2E-42 T 13-09-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PMA3_RS29275 6bf2dfbcdd7f0fd2612c96cc171ee686 110 PANTHER PTHR16821 2 110 1.3E-26 T 13-09-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PMA3_RS29275 6bf2dfbcdd7f0fd2612c96cc171ee686 110 SUPERFAMILY SSF55387 3 107 1.4E-31 T 13-09-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PMA3_RS29275 6bf2dfbcdd7f0fd2612c96cc171ee686 110 Gene3D G3DSA:3.30.920.10 3 107 1.9E-29 T 13-09-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PMA3_RS29275 6bf2dfbcdd7f0fd2612c96cc171ee686 110 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 4 107 1.1E-34 T 13-09-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PMA3_RS29275 6bf2dfbcdd7f0fd2612c96cc171ee686 110 Hamap MF_00142 Protein CyaY [cyaY]. 3 107 24.041 T 13-09-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PMA3_RS29275 6bf2dfbcdd7f0fd2612c96cc171ee686 110 Pfam PF01491 Frataxin-like domain 4 103 1.8E-25 T 13-09-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PMA3_RS02400 9de7b6b034b64b7be4078cae2d4a900c 177 Pfam PF13420 Acetyltransferase (GNAT) domain 5 157 2.9E-19 T 13-09-2016 PMA3_RS02400 9de7b6b034b64b7be4078cae2d4a900c 177 PANTHER PTHR23091:SF187 1 171 3.5E-89 T 13-09-2016 PMA3_RS02400 9de7b6b034b64b7be4078cae2d4a900c 177 PANTHER PTHR23091 1 171 3.5E-89 T 13-09-2016 PMA3_RS02400 9de7b6b034b64b7be4078cae2d4a900c 177 SUPERFAMILY SSF55729 4 166 2.16E-32 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS02400 9de7b6b034b64b7be4078cae2d4a900c 177 Gene3D G3DSA:3.40.630.30 1 170 2.0E-38 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS11685 5cdf3be10bef05dc2e2e03d753616187 617 Gene3D G3DSA:3.40.50.980 41 218 1.6E-30 T 13-09-2016 PMA3_RS11685 5cdf3be10bef05dc2e2e03d753616187 617 PANTHER PTHR24096:SF192 41 616 1.9E-196 T 13-09-2016 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 GO:0004467|GO:0006633 PMA3_RS11685 5cdf3be10bef05dc2e2e03d753616187 617 Gene3D G3DSA:2.30.38.10 404 471 7.4E-6 T 13-09-2016 PMA3_RS11685 5cdf3be10bef05dc2e2e03d753616187 617 Pfam PF00501 AMP-binding enzyme 47 478 3.7E-66 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS11685 5cdf3be10bef05dc2e2e03d753616187 617 SUPERFAMILY SSF56801 35 574 6.41E-95 T 13-09-2016 PMA3_RS11685 5cdf3be10bef05dc2e2e03d753616187 617 Gene3D G3DSA:3.40.50.980 219 362 4.5E-30 T 13-09-2016 PMA3_RS11685 5cdf3be10bef05dc2e2e03d753616187 617 PANTHER PTHR24096 41 616 1.9E-196 T 13-09-2016 PMA3_RS11685 5cdf3be10bef05dc2e2e03d753616187 617 Gene3D G3DSA:3.30.300.30 481 574 4.9E-7 T 13-09-2016 PMA3_RS11685 5cdf3be10bef05dc2e2e03d753616187 617 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS23805 2f271e1ef30e729788a0c10afec66404 369 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS23805 2f271e1ef30e729788a0c10afec66404 369 Pfam PF00005 ABC transporter 23 164 3.4E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS23805 2f271e1ef30e729788a0c10afec66404 369 PANTHER PTHR24220 8 258 3.5E-128 T 13-09-2016 PMA3_RS23805 2f271e1ef30e729788a0c10afec66404 369 Gene3D G3DSA:3.40.50.300 5 237 1.5E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23805 2f271e1ef30e729788a0c10afec66404 369 SMART SM00382 31 214 3.4E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS23805 2f271e1ef30e729788a0c10afec66404 369 PANTHER PTHR24220:SF282 8 258 3.5E-128 T 13-09-2016 PMA3_RS23805 2f271e1ef30e729788a0c10afec66404 369 SUPERFAMILY SSF50331 265 346 5.1E-12 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS23805 2f271e1ef30e729788a0c10afec66404 369 Pfam PF08402 TOBE domain 276 345 6.8E-11 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS23805 2f271e1ef30e729788a0c10afec66404 369 SUPERFAMILY SSF52540 6 241 1.33E-75 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 2.3E-22 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 313 327 2.3E-22 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 162 176 2.3E-22 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 2.3E-22 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 2.3E-22 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 Gene3D G3DSA:3.40.50.1000 286 326 1.4E-36 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 Gene3D G3DSA:3.40.50.1000 450 577 1.4E-36 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 352 5.3E-31 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 376 608 1.6E-44 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 SUPERFAMILY SSF81660 324 457 9.81E-28 T 13-09-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 Gene3D G3DSA:3.40.1110.10 327 449 3.7E-36 T 13-09-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 ProSitePatterns PS01229 Hypothetical cof family signature 2. 522 544 - T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 22 686 39.787 T 13-09-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 315 321 - T 13-09-2016 IPR018303 P-type ATPase, phosphorylation site PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 25 683 8.3E-293 T 13-09-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 Pfam PF00122 E1-E2 ATPase 83 304 1.2E-37 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 311 536 5.6E-31 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 SUPERFAMILY SSF81665 52 114 7.59E-9 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 SUPERFAMILY SSF81665 216 307 7.59E-9 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 Gene3D G3DSA:2.70.150.10 61 216 1.3E-22 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 SUPERFAMILY SSF56784 301 325 1.44E-38 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 SUPERFAMILY SSF56784 441 566 1.44E-38 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 SUPERFAMILY SSF56784 404 410 1.44E-38 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 PANTHER PTHR24093 26 593 0.0 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 PANTHER PTHR24093 631 682 0.0 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 PANTHER PTHR24093:SF49 26 593 0.0 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 PANTHER PTHR24093:SF49 631 682 0.0 T 13-09-2016 PMA3_RS20805 e97da8290914076a63db802042afb9a0 688 SUPERFAMILY SSF81653 121 215 4.05E-21 T 13-09-2016 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 9 472 7.4E-239 T 13-09-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 PRINTS PR00419 Adrenodoxin reductase family signature 174 187 3.4E-35 T 13-09-2016 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 PRINTS PR00419 Adrenodoxin reductase family signature 216 226 3.4E-35 T 13-09-2016 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 3.4E-35 T 13-09-2016 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 PRINTS PR00419 Adrenodoxin reductase family signature 151 173 3.4E-35 T 13-09-2016 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 3.4E-35 T 13-09-2016 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 Gene3D G3DSA:1.10.1060.10 10 152 2.9E-44 T 13-09-2016 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 PANTHER PTHR11938:SF93 28 470 1.9E-286 T 13-09-2016 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 Gene3D G3DSA:3.50.50.60 240 400 1.8E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 Gene3D G3DSA:3.40.50.720 401 470 6.8E-35 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 Gene3D G3DSA:3.40.50.720 153 239 6.8E-35 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 27 137 5.5E-38 T 13-09-2016 IPR028261 Dihydroprymidine dehydrogenase domain II PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 PANTHER PTHR11938 28 470 1.9E-286 T 13-09-2016 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 SUPERFAMILY SSF46548 12 160 1.99E-38 T 13-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 459 7.0E-26 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS01530 8665c7444a308be8d90ab7f5bd999e73 472 SUPERFAMILY SSF51971 148 401 1.35E-69 T 13-09-2016 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 506 2.0E-14 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SUPERFAMILY SSF55785 27 139 2.26E-26 T 13-09-2016 IPR000014 PAS domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SUPERFAMILY SSF55874 337 509 1.09E-34 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SMART SM00091 142 208 4.5E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SMART SM00091 14 83 3.3E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 Pfam PF00512 His Kinase A (phospho-acceptor) domain 282 344 1.2E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 Pfam PF00072 Response regulator receiver domain 529 610 3.9E-17 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 Pfam PF00989 PAS fold 15 123 2.8E-15 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SMART SM00388 280 346 1.6E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 Gene3D G3DSA:3.30.565.10 345 506 1.9E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 PANTHER PTHR24423 12 639 1.6E-199 T 13-09-2016 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 PANTHER PTHR24423:SF438 12 639 1.6E-199 T 13-09-2016 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SMART SM00086 212 258 43.0 T 13-09-2016 IPR001610 PAC motif PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SMART SM00086 88 130 0.0073 T 13-09-2016 IPR001610 PAC motif PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SMART SM00387 387 507 8.9E-24 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SUPERFAMILY SSF52172 526 639 2.13E-25 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 Gene3D G3DSA:3.40.50.2300 526 638 1.4E-26 T 13-09-2016 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 265 4.6E-19 T 13-09-2016 IPR000014 PAS domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 137 1.6E-22 T 13-09-2016 IPR000014 PAS domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 3.5E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 3.5E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 3.5E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 464 3.5E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 Pfam PF13426 PAS domain 155 257 3.0E-12 T 13-09-2016 IPR000014 PAS domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SUPERFAMILY SSF47384 275 343 8.83E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 Gene3D G3DSA:1.10.287.130 275 342 6.2E-4 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 Gene3D G3DSA:3.30.450.20 129 256 2.0E-25 T 13-09-2016 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 Gene3D G3DSA:3.30.450.20 14 128 1.3E-22 T 13-09-2016 PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SUPERFAMILY SSF55785 126 253 6.81E-26 T 13-09-2016 IPR000014 PAS domain PMA3_RS13790 3a00b6d6c40be3187f5144024ee607d2 640 SMART SM00448 527 635 3.2E-17 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS01030 d69e9402fc67175974f384ced9f1fb18 324 Pfam PF12146 Serine aminopeptidase, S33 63 174 3.0E-14 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS01030 d69e9402fc67175974f384ced9f1fb18 324 Gene3D G3DSA:3.40.50.1820 25 309 1.7E-33 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01030 d69e9402fc67175974f384ced9f1fb18 324 SUPERFAMILY SSF53474 28 308 2.06E-28 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01030 d69e9402fc67175974f384ced9f1fb18 324 PANTHER PTHR11614 30 308 9.4E-23 T 13-09-2016 PMA3_RS01030 d69e9402fc67175974f384ced9f1fb18 324 PANTHER PTHR11614:SF82 30 308 9.4E-23 T 13-09-2016 PMA3_RS01030 d69e9402fc67175974f384ced9f1fb18 324 PIRSF PIRSF037442 18 314 9.1E-102 T 13-09-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 Gene3D G3DSA:1.20.140.10 230 410 4.3E-55 T 13-09-2016 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 43 134 4.7E-8 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 Gene3D G3DSA:2.40.110.10 151 229 1.2E-21 T 13-09-2016 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 SUPERFAMILY SSF47203 251 410 1.93E-22 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 PANTHER PTHR10909:SF300 27 391 1.0E-170 T 13-09-2016 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 254 388 8.2E-22 T 13-09-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 PIRSF PIRSF016578 21 407 8.5E-33 T 13-09-2016 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 149 228 4.7E-9 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 SUPERFAMILY SSF56645 36 236 4.58E-43 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 Gene3D G3DSA:1.10.540.10 23 126 9.1E-22 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 PANTHER PTHR10909 27 391 1.0E-170 T 13-09-2016 PMA3_RS00700 655a2c738f846b6c5ae3b24bd3de1784 413 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 22 413 1.1E-181 T 13-09-2016 IPR023922 Sulphate-starvation-induced SfnB PMA3_RS03770 39844c0a737f60ad4d43ca5c66c410f5 360 Gene3D G3DSA:1.20.58.410 8 95 3.9E-20 T 13-09-2016 PMA3_RS03770 39844c0a737f60ad4d43ca5c66c410f5 360 Pfam PF03462 PCRF domain 12 205 2.1E-73 T 13-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PMA3_RS03770 39844c0a737f60ad4d43ca5c66c410f5 360 SUPERFAMILY SSF75620 12 355 3.27E-134 T 13-09-2016 PMA3_RS03770 39844c0a737f60ad4d43ca5c66c410f5 360 Pfam PF00472 RF-1 domain 214 323 2.1E-41 T 13-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PMA3_RS03770 39844c0a737f60ad4d43ca5c66c410f5 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 2.9E-166 T 13-09-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PMA3_RS03770 39844c0a737f60ad4d43ca5c66c410f5 360 Gene3D G3DSA:3.30.160.20 213 287 4.6E-35 T 13-09-2016 IPR014720 Double-stranded RNA-binding domain PMA3_RS03770 39844c0a737f60ad4d43ca5c66c410f5 360 SMART SM00937 65 180 4.1E-67 T 13-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PMA3_RS03770 39844c0a737f60ad4d43ca5c66c410f5 360 PANTHER PTHR11075 1 358 9.0E-174 T 13-09-2016 PMA3_RS03770 39844c0a737f60ad4d43ca5c66c410f5 360 PANTHER PTHR11075:SF9 1 358 9.0E-174 T 13-09-2016 PMA3_RS03770 39844c0a737f60ad4d43ca5c66c410f5 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.443 T 13-09-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PMA3_RS24215 527cc0b61c08b052214401db734d39d5 369 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.24 T 13-09-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PMA3_RS24215 527cc0b61c08b052214401db734d39d5 369 Pfam PF04551 GcpE protein 13 352 9.9E-136 T 13-09-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PMA3_RS24215 527cc0b61c08b052214401db734d39d5 369 SUPERFAMILY SSF51412 24 132 3.66E-10 T 13-09-2016 PMA3_RS24215 527cc0b61c08b052214401db734d39d5 369 SUPERFAMILY SSF56014 265 352 2.09E-12 T 13-09-2016 PMA3_RS24215 527cc0b61c08b052214401db734d39d5 369 Gene3D G3DSA:3.20.20.70 27 132 4.8E-11 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS24215 527cc0b61c08b052214401db734d39d5 369 PANTHER PTHR30454 1 369 4.7E-213 T 13-09-2016 PMA3_RS24215 527cc0b61c08b052214401db734d39d5 369 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 2.7E-131 T 13-09-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PMA3_RS24215 527cc0b61c08b052214401db734d39d5 369 PIRSF PIRSF004640 1 362 1.6E-149 T 13-09-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PMA3_RS28770 e908850b0ffb09f2fdd128e86746e5a0 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 201 1.9E-42 T 13-09-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial PMA3_RS28770 e908850b0ffb09f2fdd128e86746e5a0 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 9.1E-40 T 13-09-2016 PMA3_RS28770 e908850b0ffb09f2fdd128e86746e5a0 218 PANTHER PTHR10000:SF10 1 218 1.0E-64 T 13-09-2016 PMA3_RS28770 e908850b0ffb09f2fdd128e86746e5a0 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 189 1.2E-28 T 13-09-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PMA3_RS28770 e908850b0ffb09f2fdd128e86746e5a0 218 Gene3D G3DSA:1.20.1440.100 15 80 1.7E-29 T 13-09-2016 PMA3_RS28770 e908850b0ffb09f2fdd128e86746e5a0 218 Gene3D G3DSA:3.40.50.1000 81 217 1.6E-53 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS28770 e908850b0ffb09f2fdd128e86746e5a0 218 SUPERFAMILY SSF56784 1 210 1.71E-38 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS28770 e908850b0ffb09f2fdd128e86746e5a0 218 PANTHER PTHR10000 1 218 1.0E-64 T 13-09-2016 PMA3_RS14650 fd4f43ca011a980cdf351ddc4e1ec7d0 461 PANTHER PTHR23508:SF8 21 444 5.7E-152 T 13-09-2016 PMA3_RS14650 fd4f43ca011a980cdf351ddc4e1ec7d0 461 Gene3D G3DSA:1.20.1250.20 27 220 2.9E-22 T 13-09-2016 PMA3_RS14650 fd4f43ca011a980cdf351ddc4e1ec7d0 461 Gene3D G3DSA:1.20.1250.20 259 446 8.8E-20 T 13-09-2016 PMA3_RS14650 fd4f43ca011a980cdf351ddc4e1ec7d0 461 PANTHER PTHR23508 21 444 5.7E-152 T 13-09-2016 PMA3_RS14650 fd4f43ca011a980cdf351ddc4e1ec7d0 461 Pfam PF07690 Major Facilitator Superfamily 31 313 1.3E-24 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS14650 fd4f43ca011a980cdf351ddc4e1ec7d0 461 SUPERFAMILY SSF103473 23 439 4.58E-60 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 PANTHER PTHR10887 80 106 1.1E-91 T 13-09-2016 PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 Gene3D G3DSA:3.40.50.300 205 350 1.1E-14 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 42 694 54.798 T 13-09-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 PANTHER PTHR10887 199 375 1.1E-91 T 13-09-2016 PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 SUPERFAMILY SSF52540 406 437 5.08E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 SUPERFAMILY SSF52540 514 672 5.08E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 SUPERFAMILY SSF52540 336 375 5.08E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 SUPERFAMILY SSF52540 33 419 7.76E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 Pfam PF13538 UvrD-like helicase C-terminal domain 622 669 3.5E-16 T 13-09-2016 IPR027785 UvrD-like helicase C-terminal domain PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 34 694 1.4E-195 T 13-09-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 Pfam PF13604 AAA domain 207 373 2.0E-30 T 13-09-2016 PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 Gene3D G3DSA:3.40.50.300 610 673 1.5E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 Gene3D G3DSA:3.40.50.300 351 364 1.5E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 Gene3D G3DSA:3.40.50.300 413 439 1.5E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 Gene3D G3DSA:3.40.50.300 496 544 1.5E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 PANTHER PTHR10887:SF351 199 375 1.1E-91 T 13-09-2016 PMA3_RS25890 42b9af1d0e04f4b53518237f8d1404da 702 PANTHER PTHR10887:SF351 80 106 1.1E-91 T 13-09-2016 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PANTHER PTHR30222 1 370 2.8E-168 T 13-09-2016 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 80 94 4.5E-54 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 160 174 4.5E-54 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 270 289 4.5E-54 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 129 145 4.5E-54 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 36 52 4.5E-54 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 96 109 4.5E-54 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 220 239 4.5E-54 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 315 341 4.5E-54 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 183 202 4.5E-54 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 Pfam PF13416 Bacterial extracellular solute-binding protein 47 336 2.9E-32 T 13-09-2016 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 SUPERFAMILY SSF53850 30 370 6.14E-99 T 13-09-2016 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 Gene3D G3DSA:3.40.190.10 294 336 3.3E-55 T 13-09-2016 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 Gene3D G3DSA:3.40.190.10 29 138 3.3E-55 T 13-09-2016 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PANTHER PTHR30222:SF11 1 370 2.8E-168 T 13-09-2016 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 Gene3D G3DSA:3.40.190.10 139 293 6.2E-49 T 13-09-2016 PMA3_RS29785 800a5879a4b673e0eb88790bd265bce1 371 PIRSF PIRSF019574 1 371 5.1E-136 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 Gene3D G3DSA:3.30.420.40 298 352 3.8E-36 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 Gene3D G3DSA:3.30.420.40 210 234 3.8E-36 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 SUPERFAMILY SSF53067 9 197 1.19E-63 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 PIRSF PIRSF003101 1 419 5.1E-163 T 13-09-2016 IPR020823 Cell division protein FtsA GO:0007049 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.6E-32 T 13-09-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 419 32.041 T 13-09-2016 IPR020823 Cell division protein FtsA GO:0007049 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 PANTHER PTHR32432:SF4 1 388 6.1E-174 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 SUPERFAMILY SSF53067 198 378 3.24E-51 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 Pfam PF14450 Cell division protein FtsA 11 193 3.3E-11 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 Pfam PF14450 Cell division protein FtsA 207 374 2.9E-26 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 Gene3D G3DSA:3.90.640.10 235 297 1.0E-19 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 Gene3D G3DSA:3.30.420.40 158 209 2.0E-25 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 Gene3D G3DSA:3.30.420.40 5 83 2.0E-25 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 PANTHER PTHR32432 1 388 6.1E-174 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 SMART SM00842 10 196 1.4E-108 T 13-09-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 Gene3D G3DSA:3.30.1490.110 100 157 2.2E-17 T 13-09-2016 PMA3_RS04165 cbd7e6914f4bfbd3ff4eb943eb359abb 419 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 9.0E-159 T 13-09-2016 IPR020823 Cell division protein FtsA GO:0007049 PMA3_RS15655 cc4f9cdebf2c75816cca754e596681b5 250 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 7 240 2.5E-122 T 13-09-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 PMA3_RS15655 cc4f9cdebf2c75816cca754e596681b5 250 SUPERFAMILY SSF48613 1 248 9.79E-81 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS15655 cc4f9cdebf2c75816cca754e596681b5 250 PANTHER PTHR40279:SF2 6 249 2.6E-150 T 13-09-2016 PMA3_RS15655 cc4f9cdebf2c75816cca754e596681b5 250 Pfam PF03070 TENA/THI-4/PQQC family 13 222 5.1E-65 T 13-09-2016 IPR004305 Thiaminase-2/PQQC PMA3_RS15655 cc4f9cdebf2c75816cca754e596681b5 250 Gene3D G3DSA:1.20.910.10 4 248 8.9E-124 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS15655 cc4f9cdebf2c75816cca754e596681b5 250 PANTHER PTHR40279 6 249 2.6E-150 T 13-09-2016 PMA3_RS15655 cc4f9cdebf2c75816cca754e596681b5 250 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 250 140.564 T 13-09-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 Pfam PF03466 LysR substrate binding domain 91 294 5.1E-48 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 PANTHER PTHR30419 1 294 2.8E-127 T 13-09-2016 PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 Gene3D G3DSA:3.40.190.10 178 264 2.5E-22 T 13-09-2016 PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 Gene3D G3DSA:1.10.10.10 4 89 1.8E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 SUPERFAMILY SSF46785 3 112 1.51E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 PANTHER PTHR30419:SF0 1 294 2.8E-127 T 13-09-2016 PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 Gene3D G3DSA:3.40.190.10 91 177 2.7E-23 T 13-09-2016 PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.8E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.8E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.8E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 SUPERFAMILY SSF53850 93 295 1.18E-48 T 13-09-2016 PMA3_RS19180 35c07691cf5551b2d0904d4d6487c3a8 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.0E-21 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 PANTHER PTHR23024 378 394 6.8E-35 T 13-09-2016 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 PANTHER PTHR23024 57 227 6.8E-35 T 13-09-2016 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 PANTHER PTHR23024:SF214 57 227 6.8E-35 T 13-09-2016 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 SUPERFAMILY SSF51905 206 245 1.39E-5 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 SUPERFAMILY SSF51905 286 391 1.39E-5 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 Gene3D G3DSA:3.50.50.60 312 346 1.9E-4 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 Gene3D G3DSA:3.50.50.60 216 292 4.1E-5 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 Gene3D G3DSA:3.50.50.60 347 382 4.1E-5 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 Gene3D G3DSA:3.50.50.60 16 215 9.3E-12 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 2.1E-5 T 13-09-2016 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 2.1E-5 T 13-09-2016 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 209 227 2.1E-5 T 13-09-2016 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 10 357 2.3E-125 T 13-09-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 PANTHER PTHR23024:SF214 378 394 6.8E-35 T 13-09-2016 PMA3_RS20110 367e414758625c0d699431a0db6fdd5a 445 SUPERFAMILY SSF51905 7 256 3.59E-19 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22910 795324e21c6d66f450ee29a2d4d19e59 388 PANTHER PTHR23501 1 378 1.9E-162 T 13-09-2016 PMA3_RS22910 795324e21c6d66f450ee29a2d4d19e59 388 Pfam PF07690 Major Facilitator Superfamily 8 312 3.5E-38 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS22910 795324e21c6d66f450ee29a2d4d19e59 388 SUPERFAMILY SSF103473 3 378 6.67E-54 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS22910 795324e21c6d66f450ee29a2d4d19e59 388 PANTHER PTHR23501:SF4 1 378 1.9E-162 T 13-09-2016 PMA3_RS22910 795324e21c6d66f450ee29a2d4d19e59 388 Gene3D G3DSA:1.20.1250.20 5 190 5.8E-31 T 13-09-2016 PMA3_RS22910 795324e21c6d66f450ee29a2d4d19e59 388 Gene3D G3DSA:1.20.1250.20 201 379 9.8E-9 T 13-09-2016 PMA3_RS02280 4f0dc5bde0ed366ccf081fb71bfc4db1 224 PANTHER PTHR33620 1 224 3.4E-34 T 13-09-2016 PMA3_RS02280 4f0dc5bde0ed366ccf081fb71bfc4db1 224 PIRSF PIRSF009467 1 224 5.2E-59 T 13-09-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PMA3_RS02280 4f0dc5bde0ed366ccf081fb71bfc4db1 224 Pfam PF01730 UreF 35 181 2.1E-35 T 13-09-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PMA3_RS02280 4f0dc5bde0ed366ccf081fb71bfc4db1 224 Hamap MF_01385 Urease accessory protein UreF [ureF]. 3 224 28.262 T 13-09-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PMA3_RS21330 599559066d42ec7cc1d3dd9842f006e1 304 Pfam PF05661 Protein of unknown function (DUF808) 4 290 1.7E-116 T 13-09-2016 IPR008526 Inner membrane protein YedI PMA3_RS21330 599559066d42ec7cc1d3dd9842f006e1 304 PANTHER PTHR30503 2 298 1.3E-99 T 13-09-2016 PMA3_RS21330 599559066d42ec7cc1d3dd9842f006e1 304 PIRSF PIRSF016660 1 303 3.1E-120 T 13-09-2016 IPR008526 Inner membrane protein YedI PMA3_RS07720 5e392af880132514603b67429bd201d2 448 Pfam PF01474 Class-II DAHP synthetase family 5 440 1.6E-209 T 13-09-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS07720 5e392af880132514603b67429bd201d2 448 SUPERFAMILY SSF51569 2 444 4.98E-206 T 13-09-2016 PMA3_RS07720 5e392af880132514603b67429bd201d2 448 PANTHER PTHR21337 3 448 1.0E-303 T 13-09-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS07720 5e392af880132514603b67429bd201d2 448 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 447 9.5E-223 T 13-09-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 Pfam PF04539 Sigma-70 region 3 101 172 6.0E-12 T 13-09-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 PIRSF PIRSF000770 3 244 1.3E-34 T 13-09-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 PANTHER PTHR30385 11 246 1.0E-73 T 13-09-2016 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 Gene3D G3DSA:1.10.601.10 10 84 1.3E-17 T 13-09-2016 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 6 243 66.427 T 13-09-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 SUPERFAMILY SSF88659 166 243 2.24E-20 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 Gene3D G3DSA:1.10.10.10 94 137 5.2E-4 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 240 2.6E-82 T 13-09-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 240 7.6E-35 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 PRINTS PR00046 Major sigma-70 factor signature 193 205 8.8E-11 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 PRINTS PR00046 Major sigma-70 factor signature 225 236 8.8E-11 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 PRINTS PR00046 Major sigma-70 factor signature 47 60 8.8E-11 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 PRINTS PR00046 Major sigma-70 factor signature 210 225 8.8E-11 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 PANTHER PTHR30385:SF7 11 246 1.0E-73 T 13-09-2016 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 Pfam PF04545 Sigma-70, region 4 189 238 1.7E-18 T 13-09-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 SUPERFAMILY SSF88946 9 92 2.62E-24 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 Pfam PF04542 Sigma-70 region 2 20 92 2.8E-17 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 Gene3D G3DSA:1.10.10.10 177 242 1.5E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21605 f33a833c7d6da59368a89bc0164ccd14 246 SUPERFAMILY SSF88659 94 162 2.27E-12 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS14545 4525bb235505fcd8e51c644e4550a6d1 332 Pfam PF00107 Zinc-binding dehydrogenase 157 250 2.3E-24 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS14545 4525bb235505fcd8e51c644e4550a6d1 332 Gene3D G3DSA:3.40.50.720 152 259 2.5E-29 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14545 4525bb235505fcd8e51c644e4550a6d1 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 9.8E-7 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS14545 4525bb235505fcd8e51c644e4550a6d1 332 SMART SM00829 10 328 2.7E-41 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS14545 4525bb235505fcd8e51c644e4550a6d1 332 PANTHER PTHR11695:SF294 15 329 9.1E-94 T 13-09-2016 PMA3_RS14545 4525bb235505fcd8e51c644e4550a6d1 332 Gene3D G3DSA:3.90.180.10 2 151 1.6E-38 T 13-09-2016 IPR011032 GroES-like PMA3_RS14545 4525bb235505fcd8e51c644e4550a6d1 332 PANTHER PTHR11695 15 329 9.1E-94 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS14545 4525bb235505fcd8e51c644e4550a6d1 332 SUPERFAMILY SSF51735 118 269 2.44E-42 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14545 4525bb235505fcd8e51c644e4550a6d1 332 SUPERFAMILY SSF50129 2 150 2.43E-31 T 13-09-2016 IPR011032 GroES-like PMA3_RS00220 d4807370d1eebb0d2ce4f451501114fa 270 PANTHER PTHR10314:SF4 1 51 1.6E-20 T 13-09-2016 PMA3_RS00220 d4807370d1eebb0d2ce4f451501114fa 270 Gene3D G3DSA:3.20.20.70 2 266 6.3E-101 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS00220 d4807370d1eebb0d2ce4f451501114fa 270 SUPERFAMILY SSF51366 1 244 8.95E-90 T 13-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PMA3_RS00220 d4807370d1eebb0d2ce4f451501114fa 270 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 263 36.173 T 13-09-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PMA3_RS00220 d4807370d1eebb0d2ce4f451501114fa 270 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 255 3.2E-76 T 13-09-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PMA3_RS00220 d4807370d1eebb0d2ce4f451501114fa 270 PANTHER PTHR10314 1 51 1.6E-20 T 13-09-2016 PMA3_RS00220 d4807370d1eebb0d2ce4f451501114fa 270 Pfam PF00290 Tryptophan synthase alpha chain 8 262 1.0E-97 T 13-09-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PMA3_RS00220 d4807370d1eebb0d2ce4f451501114fa 270 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 13-09-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PMA3_RS00220 d4807370d1eebb0d2ce4f451501114fa 270 PANTHER PTHR10314 74 130 1.6E-20 T 13-09-2016 PMA3_RS00220 d4807370d1eebb0d2ce4f451501114fa 270 PANTHER PTHR10314:SF4 74 130 1.6E-20 T 13-09-2016 PMA3_RS04965 c3fc054b7635565b48bfb0e7b17a100d 249 SUPERFAMILY SSF64167 1 247 3.66E-81 T 13-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PMA3_RS04965 c3fc054b7635565b48bfb0e7b17a100d 249 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 3.5E-62 T 13-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PMA3_RS04965 c3fc054b7635565b48bfb0e7b17a100d 249 Pfam PF01975 Survival protein SurE 3 181 1.1E-54 T 13-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PMA3_RS04965 c3fc054b7635565b48bfb0e7b17a100d 249 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 248 37.494 T 13-09-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PMA3_RS04965 c3fc054b7635565b48bfb0e7b17a100d 249 Gene3D G3DSA:3.40.1210.10 1 246 1.5E-80 T 13-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PMA3_RS04965 c3fc054b7635565b48bfb0e7b17a100d 249 PANTHER PTHR30457 1 249 5.1E-89 T 13-09-2016 PMA3_RS17555 2f84cbdcd64e10d4eb95dcaed44b4ab7 153 Pfam PF07012 Curlin associated repeat 92 120 1.4E-6 T 13-09-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 PMA3_RS17555 2f84cbdcd64e10d4eb95dcaed44b4ab7 153 Pfam PF07012 Curlin associated repeat 120 152 2.6E-7 T 13-09-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 PMA3_RS17555 2f84cbdcd64e10d4eb95dcaed44b4ab7 153 Pfam PF07012 Curlin associated repeat 72 98 9.5E-6 T 13-09-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 PMA3_RS01400 9843c91036786a60693f92de8ad43098 140 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 20 138 3.9E-41 T 13-09-2016 IPR008769 Poly granule associated PMA3_RS01400 9843c91036786a60693f92de8ad43098 140 PANTHER PTHR38664 10 139 1.0E-21 T 13-09-2016 PMA3_RS01400 9843c91036786a60693f92de8ad43098 140 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 13 137 2.1E-42 T 13-09-2016 IPR008769 Poly granule associated PMA3_RS01400 9843c91036786a60693f92de8ad43098 140 PANTHER PTHR38664:SF1 10 139 1.0E-21 T 13-09-2016 PMA3_RS22765 7a513d6fdcaf3e5c43fc63618e39f33b 167 Gene3D G3DSA:1.20.1260.10 28 163 5.4E-4 T 13-09-2016 IPR012347 Ferritin-related PMA3_RS22765 7a513d6fdcaf3e5c43fc63618e39f33b 167 PANTHER PTHR38593 9 167 1.2E-16 T 13-09-2016 PMA3_RS22765 7a513d6fdcaf3e5c43fc63618e39f33b 167 Pfam PF13628 Domain of unknown function (DUF4142) 29 163 1.8E-29 T 13-09-2016 IPR025419 Domain of unknown function DUF4142 PMA3_RS22765 7a513d6fdcaf3e5c43fc63618e39f33b 167 PANTHER PTHR38593:SF2 9 167 1.2E-16 T 13-09-2016 PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 Gene3D G3DSA:3.40.50.300 2 203 6.6E-33 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 Gene3D G3DSA:3.40.50.300 253 379 2.2E-20 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 PANTHER PTHR24031:SF122 245 370 2.2E-48 T 13-09-2016 PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 SMART SM00490 275 356 3.3E-5 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 SMART SM00487 15 229 2.3E-19 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 PANTHER PTHR24031 18 223 2.2E-48 T 13-09-2016 PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 PANTHER PTHR24031 245 370 2.2E-48 T 13-09-2016 PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 PIRSF PIRSF037307 3 825 1.4E-144 T 13-09-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 SUPERFAMILY SSF52540 26 202 3.14E-39 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 SUPERFAMILY SSF52540 231 367 3.14E-39 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 Pfam PF08494 DEAD/H associated 605 790 1.7E-48 T 13-09-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 9 820 0.0 T 13-09-2016 IPR026362 DEXH box helicase, DNA ligase-associated PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 Pfam PF00270 DEAD/DEAH box helicase 22 200 3.2E-21 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 PANTHER PTHR24031:SF122 18 223 2.2E-48 T 13-09-2016 PMA3_RS05155 930da99d34666f748f71bc6618652b77 828 Pfam PF00271 Helicase conserved C-terminal domain 258 357 4.7E-10 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS02780 7f2a811426d92c6ae03f279e412b8b68 297 SUPERFAMILY SSF161111 9 210 2.35E-53 T 13-09-2016 PMA3_RS02780 7f2a811426d92c6ae03f279e412b8b68 297 SUPERFAMILY SSF160240 212 289 2.22E-21 T 13-09-2016 PMA3_RS02780 7f2a811426d92c6ae03f279e412b8b68 297 Pfam PF01545 Cation efflux family 16 208 4.9E-39 T 13-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PMA3_RS02780 7f2a811426d92c6ae03f279e412b8b68 297 Gene3D G3DSA:1.20.1510.10 14 208 2.9E-46 T 13-09-2016 IPR027469 Cation efflux protein transmembrane domain PMA3_RS02780 7f2a811426d92c6ae03f279e412b8b68 297 PANTHER PTHR11562:SF55 6 288 3.9E-102 T 13-09-2016 PMA3_RS02780 7f2a811426d92c6ae03f279e412b8b68 297 PANTHER PTHR11562 6 288 3.9E-102 T 13-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PMA3_RS02780 7f2a811426d92c6ae03f279e412b8b68 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 288 3.3E-64 T 13-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PMA3_RS02780 7f2a811426d92c6ae03f279e412b8b68 297 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 288 3.2E-22 T 13-09-2016 IPR027470 Cation efflux protein, cytoplasmic domain PMA3_RS02780 7f2a811426d92c6ae03f279e412b8b68 297 Gene3D G3DSA:3.30.70.1350 209 290 8.8E-26 T 13-09-2016 IPR027470 Cation efflux protein, cytoplasmic domain PMA3_RS27005 317ebbbc55ac98f056c8f4f370b9ce8f 172 Pfam PF11736 Protein of unknown function (DUF3299) 24 168 2.0E-50 T 13-09-2016 IPR021727 Protein of unknown function DUF3299 PMA3_RS02575 0b7290903404400375792b311ab37da3 578 PANTHER PTHR32234:SF0 7 578 6.1E-166 T 13-09-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PMA3_RS02575 0b7290903404400375792b311ab37da3 578 Gene3D G3DSA:3.40.30.10 463 576 2.2E-25 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS02575 0b7290903404400375792b311ab37da3 578 SUPERFAMILY SSF52833 465 573 9.12E-21 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS02575 0b7290903404400375792b311ab37da3 578 SUPERFAMILY SSF74863 35 150 4.18E-36 T 13-09-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PMA3_RS02575 0b7290903404400375792b311ab37da3 578 Pfam PF13899 Thioredoxin-like 467 547 3.3E-13 T 13-09-2016 PMA3_RS02575 0b7290903404400375792b311ab37da3 578 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 575 33.481 T 13-09-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PMA3_RS02575 0b7290903404400375792b311ab37da3 578 Pfam PF11412 Disulphide bond corrector protein DsbC 37 148 7.6E-32 T 13-09-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PMA3_RS02575 0b7290903404400375792b311ab37da3 578 Gene3D G3DSA:2.60.40.1250 33 151 1.1E-40 T 13-09-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PMA3_RS02575 0b7290903404400375792b311ab37da3 578 PANTHER PTHR32234 7 578 6.1E-166 T 13-09-2016 PMA3_RS02575 0b7290903404400375792b311ab37da3 578 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 167 341 8.6E-13 T 13-09-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 45.992 T 13-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 13-09-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.3E-38 T 13-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.3E-38 T 13-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.3E-38 T 13-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.3E-38 T 13-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.3E-38 T 13-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 154 1.4E-60 T 13-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 SUPERFAMILY SSF53098 3 156 1.78E-51 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 Gene3D G3DSA:3.30.420.10 3 156 1.1E-61 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.6E-64 T 13-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PMA3_RS23270 857e8cb14545398b7956cef5c6a217de 174 PANTHER PTHR30194 1 169 1.7E-68 T 13-09-2016 PMA3_RS15235 5a2a628e2b523962e612f9b28385c468 389 Pfam PF10282 Lactonase, 7-bladed beta-propeller 28 385 3.8E-114 T 13-09-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 PMA3_RS15235 5a2a628e2b523962e612f9b28385c468 389 Gene3D G3DSA:2.130.10.10 26 387 6.2E-95 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS15235 5a2a628e2b523962e612f9b28385c468 389 PANTHER PTHR30344 18 386 6.9E-108 T 13-09-2016 PMA3_RS15235 5a2a628e2b523962e612f9b28385c468 389 PANTHER PTHR30344:SF1 18 386 6.9E-108 T 13-09-2016 PMA3_RS15235 5a2a628e2b523962e612f9b28385c468 389 SUPERFAMILY SSF51004 63 369 1.05E-46 T 13-09-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PANTHER PTHR24322:SF392 152 184 3.6E-81 T 13-09-2016 PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PANTHER PTHR24322:SF392 7 136 3.6E-81 T 13-09-2016 PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PANTHER PTHR24322 7 136 3.6E-81 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 Pfam PF00106 short chain dehydrogenase 4 189 6.8E-48 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PANTHER PTHR24322 152 184 3.6E-81 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 Gene3D G3DSA:3.40.50.720 4 233 9.3E-61 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.4E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.4E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.4E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.4E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.4E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 SUPERFAMILY SSF51735 4 234 1.9E-58 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 0.002 T 13-09-2016 PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.4E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.4E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02260 7d5dfe347caa0daf53fbcdaa63439c7d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 6.4E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.4E-12 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 215 229 1.4E-12 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.4E-12 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 PRINTS PR00412 Epoxide hydrolase signature 213 229 3.3E-7 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 PRINTS PR00412 Epoxide hydrolase signature 27 45 3.3E-7 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 PRINTS PR00412 Epoxide hydrolase signature 47 62 3.3E-7 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 PANTHER PTHR10992:SF859 4 272 4.8E-111 T 13-09-2016 PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 Pfam PF00561 alpha/beta hydrolase fold 22 252 1.5E-29 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 SUPERFAMILY SSF53474 3 272 1.04E-68 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 PANTHER PTHR10992 4 272 4.8E-111 T 13-09-2016 PMA3_RS14360 f94b3045e7cde452d4fd280f0802d213 272 Gene3D G3DSA:3.40.50.1820 2 271 1.8E-73 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 PANTHER PTHR10314:SF30 1 358 2.1E-206 T 13-09-2016 PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 Gene3D G3DSA:3.40.50.1100 101 332 1.6E-79 T 13-09-2016 PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 409 2.0E-24 T 13-09-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 415 503 1.2E-20 T 13-09-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 306 2.7E-84 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 Gene3D G3DSA:3.40.50.1100 24 100 4.0E-8 T 13-09-2016 PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 13-09-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 SUPERFAMILY SSF53686 11 355 6.29E-109 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 SUPERFAMILY SSF55021 410 503 2.29E-26 T 13-09-2016 PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 SUPERFAMILY SSF55021 327 413 7.48E-28 T 13-09-2016 PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 503 7.3E-245 T 13-09-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 PANTHER PTHR10314 1 358 2.1E-206 T 13-09-2016 PMA3_RS28780 e3d6e893ac4f6c4e40f6b18587fd9c64 504 Gene3D G3DSA:3.40.1020.10 333 503 1.5E-53 T 13-09-2016 PMA3_RS10370 16897c150e88c541de26422b3e27a9fe 326 PANTHER PTHR11695 16 326 1.1E-118 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS10370 16897c150e88c541de26422b3e27a9fe 326 Gene3D G3DSA:3.40.50.720 149 258 3.9E-30 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10370 16897c150e88c541de26422b3e27a9fe 326 SUPERFAMILY SSF51735 114 266 3.55E-46 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10370 16897c150e88c541de26422b3e27a9fe 326 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 142 163 - T 13-09-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PMA3_RS10370 16897c150e88c541de26422b3e27a9fe 326 PANTHER PTHR11695:SF605 16 326 1.1E-118 T 13-09-2016 PMA3_RS10370 16897c150e88c541de26422b3e27a9fe 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 4.6E-9 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS10370 16897c150e88c541de26422b3e27a9fe 326 Gene3D G3DSA:3.90.180.10 3 148 1.4E-41 T 13-09-2016 IPR011032 GroES-like PMA3_RS10370 16897c150e88c541de26422b3e27a9fe 326 Pfam PF00107 Zinc-binding dehydrogenase 153 259 1.1E-28 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS10370 16897c150e88c541de26422b3e27a9fe 326 SUPERFAMILY SSF50129 3 146 2.67E-35 T 13-09-2016 IPR011032 GroES-like PMA3_RS10370 16897c150e88c541de26422b3e27a9fe 326 SMART SM00829 11 324 1.1E-28 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS18705 b8e0752fe57c723741d9fb84804455b9 260 Gene3D G3DSA:3.90.226.10 1 198 1.4E-63 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS18705 b8e0752fe57c723741d9fb84804455b9 260 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 1 259 46.25 T 13-09-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 PMA3_RS18705 b8e0752fe57c723741d9fb84804455b9 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 13-09-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PMA3_RS18705 b8e0752fe57c723741d9fb84804455b9 260 SUPERFAMILY SSF52096 1 257 2.78E-77 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS18705 b8e0752fe57c723741d9fb84804455b9 260 PANTHER PTHR11941 3 255 1.4E-127 T 13-09-2016 PMA3_RS18705 b8e0752fe57c723741d9fb84804455b9 260 TIGRFAM TIGR03210 badI: 2-ketocyclohexanecarboxyl-CoA hydrolase 3 258 2.9E-142 T 13-09-2016 IPR017623 2-ketocyclohexanecarboxyl-CoA hydrolase PMA3_RS18705 b8e0752fe57c723741d9fb84804455b9 260 PANTHER PTHR11941:SF20 3 255 1.4E-127 T 13-09-2016 PMA3_RS18705 b8e0752fe57c723741d9fb84804455b9 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 256 2.2E-70 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS18705 b8e0752fe57c723741d9fb84804455b9 260 Gene3D G3DSA:1.10.12.10 200 250 1.0E-18 T 13-09-2016 IPR014748 Crontonase, C-terminal PMA3_RS23845 ced4abcd71e03801a414b374659c2d35 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 237 1.1E-25 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23845 ced4abcd71e03801a414b374659c2d35 248 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 131 1.5E-18 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS23845 ced4abcd71e03801a414b374659c2d35 248 PANTHER PTHR30085 1 244 8.1E-141 T 13-09-2016 PMA3_RS23845 ced4abcd71e03801a414b374659c2d35 248 SUPERFAMILY SSF161098 24 223 4.58E-43 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23845 ced4abcd71e03801a414b374659c2d35 248 PANTHER PTHR30085:SF4 1 244 8.1E-141 T 13-09-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 PMA3_RS23845 ced4abcd71e03801a414b374659c2d35 248 Gene3D G3DSA:1.10.3720.10 23 237 3.2E-50 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS06760 e6c4989d05d0995f63b2839c36801d9b 436 PANTHER PTHR11662:SF18 14 433 5.7E-142 T 13-09-2016 PMA3_RS06760 e6c4989d05d0995f63b2839c36801d9b 436 Pfam PF07690 Major Facilitator Superfamily 26 394 4.6E-59 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS06760 e6c4989d05d0995f63b2839c36801d9b 436 Gene3D G3DSA:1.20.1250.20 241 429 3.6E-22 T 13-09-2016 PMA3_RS06760 e6c4989d05d0995f63b2839c36801d9b 436 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 28 428 4.1E-126 T 13-09-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS06760 e6c4989d05d0995f63b2839c36801d9b 436 PIRSF PIRSF002808 3 435 3.3E-36 T 13-09-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS06760 e6c4989d05d0995f63b2839c36801d9b 436 PANTHER PTHR11662 14 433 5.7E-142 T 13-09-2016 PMA3_RS06760 e6c4989d05d0995f63b2839c36801d9b 436 SUPERFAMILY SSF103473 14 430 2.49E-81 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS06760 e6c4989d05d0995f63b2839c36801d9b 436 Gene3D G3DSA:1.20.1250.20 18 201 1.4E-51 T 13-09-2016 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 697 7.9E-239 T 13-09-2016 IPR004811 RelA/SpoT family GO:0015969 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 PANTHER PTHR21262:SF0 1 701 0.0 T 13-09-2016 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 2.8E-36 T 13-09-2016 IPR007685 RelA/SpoT GO:0015969 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 SUPERFAMILY SSF81271 376 448 1.09E-21 T 13-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 SUPERFAMILY SSF81301 181 393 1.31E-59 T 13-09-2016 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 Pfam PF13328 HD domain 26 175 6.5E-51 T 13-09-2016 IPR003607 HD/PDEase domain PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 Gene3D G3DSA:3.30.70.260 624 696 1.6E-7 T 13-09-2016 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 Pfam PF13291 ACT domain 622 698 2.2E-15 T 13-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 SMART SM00471 41 153 7.2E-8 T 13-09-2016 IPR003607 HD/PDEase domain PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 SUPERFAMILY SSF109604 4 191 3.77E-70 T 13-09-2016 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 SMART SM00954 235 345 2.4E-63 T 13-09-2016 IPR007685 RelA/SpoT GO:0015969 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 SUPERFAMILY SSF55021 624 699 1.15E-7 T 13-09-2016 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 Gene3D G3DSA:3.10.20.30 388 448 5.7E-21 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 Gene3D G3DSA:3.30.460.10 195 325 1.8E-45 T 13-09-2016 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 PANTHER PTHR21262 1 701 0.0 T 13-09-2016 PMA3_RS29565 015325b586930284194ffea00eecbd1f 701 Pfam PF02824 TGS domain 389 447 2.7E-18 T 13-09-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PMA3_RS20985 9c7262f6b234ec73e376f7862cd67c7a 444 PANTHER PTHR11271 1 440 7.0E-188 T 13-09-2016 PMA3_RS20985 9c7262f6b234ec73e376f7862cd67c7a 444 Gene3D G3DSA:2.30.40.10 373 392 9.0E-10 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS20985 9c7262f6b234ec73e376f7862cd67c7a 444 Gene3D G3DSA:2.30.40.10 24 68 9.0E-10 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS20985 9c7262f6b234ec73e376f7862cd67c7a 444 PANTHER PTHR11271:SF7 1 440 7.0E-188 T 13-09-2016 PMA3_RS20985 9c7262f6b234ec73e376f7862cd67c7a 444 SUPERFAMILY SSF51556 66 365 5.45E-93 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS20985 9c7262f6b234ec73e376f7862cd67c7a 444 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 9 439 39.336 T 13-09-2016 IPR023512 Deaminase MtaD/DadD GO:0019239 PMA3_RS20985 9c7262f6b234ec73e376f7862cd67c7a 444 Pfam PF01979 Amidohydrolase family 64 412 3.4E-69 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS20985 9c7262f6b234ec73e376f7862cd67c7a 444 Gene3D G3DSA:3.20.20.140 69 372 5.6E-96 T 13-09-2016 PMA3_RS20985 9c7262f6b234ec73e376f7862cd67c7a 444 SUPERFAMILY SSF51338 9 66 7.92E-24 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS20985 9c7262f6b234ec73e376f7862cd67c7a 444 SUPERFAMILY SSF51338 364 438 7.92E-24 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS13015 fb488dc6b3ea542ef61cefcc0d588404 369 Pfam PF08713 DNA alkylation repair enzyme 117 237 1.1E-6 T 13-09-2016 IPR014825 DNA alkylation repair enzyme PMA3_RS13015 fb488dc6b3ea542ef61cefcc0d588404 369 SUPERFAMILY SSF48371 46 240 1.81E-45 T 13-09-2016 IPR016024 Armadillo-type fold GO:0005488 PMA3_RS13015 fb488dc6b3ea542ef61cefcc0d588404 369 Gene3D G3DSA:1.25.40.290 137 238 3.1E-6 T 13-09-2016 PMA3_RS13015 fb488dc6b3ea542ef61cefcc0d588404 369 PANTHER PTHR39167 4 369 4.0E-107 T 13-09-2016 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 ProSitePatterns PS00177 DNA topoisomerase II signature. 420 428 - T 13-09-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 149 3.2E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PANTHER PTHR10169:SF45 7 633 0.0 T 13-09-2016 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR00418 DNA topoisomerase II family signature 483 499 9.6E-59 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR00418 DNA topoisomerase II family signature 35 50 9.6E-59 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR00418 DNA topoisomerase II family signature 501 518 9.6E-59 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR00418 DNA topoisomerase II family signature 566 582 9.6E-59 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR00418 DNA topoisomerase II family signature 70 83 9.6E-59 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR00418 DNA topoisomerase II family signature 521 533 9.6E-59 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR00418 DNA topoisomerase II family signature 113 127 9.6E-59 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR00418 DNA topoisomerase II family signature 270 283 9.6E-59 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR00418 DNA topoisomerase II family signature 418 432 9.6E-59 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 Pfam PF00204 DNA gyrase B 223 389 1.7E-38 T 13-09-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 SUPERFAMILY SSF54211 221 386 1.52E-44 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PANTHER PTHR10169 7 633 0.0 T 13-09-2016 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 Gene3D G3DSA:3.30.565.10 19 219 4.7E-74 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 SMART SM00433 38 628 5.8E-208 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 SUPERFAMILY SSF55874 9 219 1.7E-65 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 8 628 0.0 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 298 314 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 473 485 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 507 523 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 342 365 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 242 265 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 452 473 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 588 602 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 139 153 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 153 168 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 178 195 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 196 217 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 315 330 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 30 43 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 366 391 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 PRINTS PR01098 Topoisomerase IV subunit B signature 541 563 1.6E-112 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 Pfam PF01751 Toprim domain 417 526 3.2E-13 T 13-09-2016 IPR006171 Toprim domain PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 Gene3D G3DSA:3.30.230.10 220 394 6.0E-45 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 562 624 1.6E-24 T 13-09-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 SMART SM00387 31 177 2.6E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 6 632 46.61 T 13-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 Gene3D G3DSA:3.40.50.670 402 615 2.1E-77 T 13-09-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01945 a09d308855cf2e791cdb8d8effddb7af 634 SUPERFAMILY SSF56719 392 625 1.07E-76 T 13-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PMA3_RS03600 ddcd0c8e1ff5d1f636bd3e516537de58 337 SUPERFAMILY SSF56524 81 333 4.97E-89 T 13-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PMA3_RS03600 ddcd0c8e1ff5d1f636bd3e516537de58 337 Pfam PF00174 Oxidoreductase molybdopterin binding domain 114 271 1.2E-28 T 13-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PMA3_RS03600 ddcd0c8e1ff5d1f636bd3e516537de58 337 PANTHER PTHR19372 13 332 1.5E-143 T 13-09-2016 PMA3_RS03600 ddcd0c8e1ff5d1f636bd3e516537de58 337 Gene3D G3DSA:3.90.420.10 84 335 4.9E-69 T 13-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PMA3_RS03600 ddcd0c8e1ff5d1f636bd3e516537de58 337 PANTHER PTHR19372:SF1 13 332 1.5E-143 T 13-09-2016 PMA3_RS03600 ddcd0c8e1ff5d1f636bd3e516537de58 337 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 5 337 59.811 T 13-09-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 PMA3_RS02570 04743ea1a56bae7b4ec06658495c7c6c 151 PANTHER PTHR21272 1 150 5.9E-93 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02570 04743ea1a56bae7b4ec06658495c7c6c 151 SUPERFAMILY SSF52304 3 146 2.62E-63 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02570 04743ea1a56bae7b4ec06658495c7c6c 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 143 1.6E-61 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02570 04743ea1a56bae7b4ec06658495c7c6c 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 75.568 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02570 04743ea1a56bae7b4ec06658495c7c6c 151 PIRSF PIRSF001399 1 147 5.1E-59 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02570 04743ea1a56bae7b4ec06658495c7c6c 151 Gene3D G3DSA:3.40.50.9100 3 147 1.1E-67 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02570 04743ea1a56bae7b4ec06658495c7c6c 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 134 6.0E-69 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02570 04743ea1a56bae7b4ec06658495c7c6c 151 Pfam PF01220 Dehydroquinase class II 4 140 2.2E-59 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02570 04743ea1a56bae7b4ec06658495c7c6c 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 13-09-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS12080 4afb7c7434926d423e0e3c8b3e2cdb57 495 PANTHER PTHR11271:SF7 111 456 2.4E-55 T 13-09-2016 PMA3_RS12080 4afb7c7434926d423e0e3c8b3e2cdb57 495 Pfam PF01979 Amidohydrolase family 105 425 4.4E-22 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS12080 4afb7c7434926d423e0e3c8b3e2cdb57 495 SUPERFAMILY SSF51556 100 379 1.36E-52 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS12080 4afb7c7434926d423e0e3c8b3e2cdb57 495 SUPERFAMILY SSF51338 360 456 5.76E-28 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS12080 4afb7c7434926d423e0e3c8b3e2cdb57 495 PANTHER PTHR11271 111 456 2.4E-55 T 13-09-2016 PMA3_RS12080 4afb7c7434926d423e0e3c8b3e2cdb57 495 Gene3D G3DSA:2.30.40.10 390 431 3.7E-6 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS12080 4afb7c7434926d423e0e3c8b3e2cdb57 495 Gene3D G3DSA:2.30.40.10 14 60 3.7E-6 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS12080 4afb7c7434926d423e0e3c8b3e2cdb57 495 Gene3D G3DSA:3.20.20.140 100 389 2.8E-59 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 172 470 1.1E-11 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 Gene3D G3DSA:2.40.30.110 910 1005 2.5E-16 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 SUPERFAMILY SSF101790 906 1003 2.62E-15 T 13-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 2 1005 0.0 T 13-09-2016 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 SUPERFAMILY SSF51905 167 472 2.73E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 Pfam PF01571 Aminomethyltransferase folate-binding domain 620 885 1.1E-73 T 13-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 SUPERFAMILY SSF103025 614 896 9.1E-92 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 1.9E-10 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 192 1.9E-10 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 450 472 1.9E-10 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 172 194 3.1E-12 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 460 478 3.1E-12 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 373 389 3.1E-12 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 284 292 3.1E-12 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PANTHER PTHR13847 120 222 5.5E-150 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PANTHER PTHR13847 616 928 5.5E-150 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 102 2.7E-22 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 Gene3D G3DSA:3.30.70.1400 673 742 8.7E-23 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PANTHER PTHR13847:SF189 120 222 5.5E-150 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PANTHER PTHR13847:SF189 616 928 5.5E-150 T 13-09-2016 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 Gene3D G3DSA:3.50.50.60 359 440 8.3E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 Gene3D G3DSA:3.50.50.60 164 312 8.3E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 908 991 4.2E-8 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 Gene3D G3DSA:3.30.1360.120 743 862 7.5E-23 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS27950 faf4697404ad9939b5f83280943b6e0b 1005 PIRSF PIRSF037980 1 1005 0.0 T 13-09-2016 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 13-09-2016 IPR031157 Tr-type G domain, conserved site PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 Gene3D G3DSA:3.30.70.240 399 477 1.2E-29 T 13-09-2016 IPR000640 Translation elongation factor EFG, V domain PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 PANTHER PTHR23115:SF14 3 602 7.2E-291 T 13-09-2016 IPR006298 GTP-binding protein TypA GO:0005525 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 SUPERFAMILY SSF54980 398 512 8.63E-26 T 13-09-2016 IPR009022 Elongation factor G, III-V domain PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 Gene3D G3DSA:2.40.50.250 483 577 2.8E-39 T 13-09-2016 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 139 1.5E-23 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 SUPERFAMILY SSF54980 302 387 2.99E-14 T 13-09-2016 IPR009022 Elongation factor G, III-V domain PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 Gene3D G3DSA:3.40.50.300 3 205 2.3E-65 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 Pfam PF00679 Elongation factor G C-terminus 397 477 5.6E-21 T 13-09-2016 IPR000640 Translation elongation factor EFG, V domain PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.1E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 PRINTS PR00315 GTP-binding elongation factor signature 71 81 3.1E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 PRINTS PR00315 GTP-binding elongation factor signature 7 20 3.1E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 PRINTS PR00315 GTP-binding elongation factor signature 123 132 3.1E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 Gene3D G3DSA:3.30.70.870 304 398 1.4E-34 T 13-09-2016 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 Gene3D G3DSA:2.40.30.10 206 303 1.5E-23 T 13-09-2016 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 SUPERFAMILY SSF50447 151 299 2.7E-31 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 PANTHER PTHR23115 3 602 7.2E-291 T 13-09-2016 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 SUPERFAMILY SSF52540 3 207 4.53E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 Pfam PF03144 Elongation factor Tu domain 2 223 289 2.2E-9 T 13-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 8.7E-282 T 13-09-2016 IPR006298 GTP-binding protein TypA GO:0005525 PMA3_RS01195 b48ca57402b184d8fbf6c6d4daaf0e2c 606 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 2.1E-55 T 13-09-2016 PMA3_RS26700 28c453bd47b83618ca3e35bb6b664c64 482 PANTHER PTHR11785 26 461 1.3E-161 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS26700 28c453bd47b83618ca3e35bb6b664c64 482 TIGRFAM TIGR00908 2A0305: ethanolamine permease 26 470 7.6E-204 T 13-09-2016 IPR004757 Ethanolamine permease PMA3_RS26700 28c453bd47b83618ca3e35bb6b664c64 482 Pfam PF13520 Amino acid permease 63 453 1.4E-40 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS26700 28c453bd47b83618ca3e35bb6b664c64 482 PANTHER PTHR11785:SF337 26 461 1.3E-161 T 13-09-2016 PMA3_RS26700 28c453bd47b83618ca3e35bb6b664c64 482 PIRSF PIRSF006060 10 480 7.0E-70 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 25 1109 28.867 T 13-09-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 Gene3D G3DSA:3.40.50.300 798 955 8.5E-35 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 SUPERFAMILY SSF141259 469 547 7.98E-23 T 13-09-2016 IPR003711 CarD-like/TRCF domain PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 SMART SM00490 825 909 6.1E-16 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 PANTHER PTHR14025:SF21 382 1145 0.0 T 13-09-2016 PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 SMART SM00487 599 789 1.6E-34 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 SUPERFAMILY SSF52540 522 782 1.92E-61 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 Pfam PF03461 TRCF domain 1008 1099 3.1E-27 T 13-09-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 PANTHER PTHR14025 382 1145 0.0 T 13-09-2016 PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 147 1080 0.0 T 13-09-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 SUPERFAMILY SSF143517 993 1145 4.71E-43 T 13-09-2016 PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 SUPERFAMILY SSF52540 351 465 3.56E-31 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 SUPERFAMILY SSF52540 11 342 1.46E-105 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 SMART SM01058 478 575 1.3E-48 T 13-09-2016 IPR003711 CarD-like/TRCF domain PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 Pfam PF02559 CarD-like/TRCF domain 479 574 8.0E-24 T 13-09-2016 IPR003711 CarD-like/TRCF domain PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 Gene3D G3DSA:3.40.50.300 592 785 1.4E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 Gene3D G3DSA:3.30.2060.10 130 207 2.3E-14 T 13-09-2016 PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 Pfam PF00270 DEAD/DEAH box helicase 604 764 8.0E-19 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 Pfam PF00271 Helicase conserved C-terminal domain 804 908 3.6E-17 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 SUPERFAMILY SSF52540 781 988 1.98E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08670 59f2abca094eea74dc1bb11caaa4809c 1149 SMART SM00982 1007 1107 5.3E-52 T 13-09-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 PANTHER PTHR30154:SF28 3 160 3.3E-54 T 13-09-2016 PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 5.7E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 5.7E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 5.7E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 2.4E-19 T 13-09-2016 PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 Gene3D G3DSA:3.30.70.920 64 148 1.8E-26 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 SMART SM00344 11 120 1.1E-42 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 8.5E-22 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 SUPERFAMILY SSF46785 5 101 1.32E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 SUPERFAMILY SSF54909 71 156 6.57E-20 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 Gene3D G3DSA:1.10.10.10 12 62 9.1E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14265 e4dfa60cd89a1c18655f892d51de97da 166 PANTHER PTHR30154 3 160 3.3E-54 T 13-09-2016 PMA3_RS28320 a5cdd4da0d807e6d48444a02afa386d6 205 PANTHER PTHR20855:SF3 3 205 2.0E-61 T 13-09-2016 IPR005744 Hly-III GO:0016021|GO:0019835 PMA3_RS28320 a5cdd4da0d807e6d48444a02afa386d6 205 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 204 1.8E-64 T 13-09-2016 IPR005744 Hly-III GO:0016021|GO:0019835 PMA3_RS28320 a5cdd4da0d807e6d48444a02afa386d6 205 Pfam PF03006 Haemolysin-III related 2 197 2.4E-45 T 13-09-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 PMA3_RS28320 a5cdd4da0d807e6d48444a02afa386d6 205 PANTHER PTHR20855 3 205 2.0E-61 T 13-09-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 PMA3_RS12420 93244b099deb5d471148892d336ee138 194 Pfam PF00072 Response regulator receiver domain 5 97 2.0E-20 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12420 93244b099deb5d471148892d336ee138 194 SUPERFAMILY SSF46894 119 191 1.22E-16 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS12420 93244b099deb5d471148892d336ee138 194 SMART SM00421 127 184 6.3E-16 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS12420 93244b099deb5d471148892d336ee138 194 SUPERFAMILY SSF52172 2 113 1.85E-25 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS12420 93244b099deb5d471148892d336ee138 194 SMART SM00448 1 96 8.8E-10 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12420 93244b099deb5d471148892d336ee138 194 ProSitePatterns PS00622 LuxR-type HTH domain signature. 144 171 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS12420 93244b099deb5d471148892d336ee138 194 Gene3D G3DSA:1.10.10.10 104 191 1.9E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12420 93244b099deb5d471148892d336ee138 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 128 184 8.4E-19 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS12420 93244b099deb5d471148892d336ee138 194 PANTHER PTHR26402 1 192 1.3E-79 T 13-09-2016 PMA3_RS12420 93244b099deb5d471148892d336ee138 194 PANTHER PTHR26402:SF506 1 192 1.3E-79 T 13-09-2016 PMA3_RS12420 93244b099deb5d471148892d336ee138 194 Gene3D G3DSA:3.40.50.2300 7 103 1.4E-25 T 13-09-2016 PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 Pfam PF09099 Quinohemoprotein amine dehydrogenase, alpha subunit domain III 313 391 1.5E-25 T 13-09-2016 IPR015183 Quinohemoprotein amine dehydrogenase, alpha subunit domain III PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 SUPERFAMILY SSF81296 313 391 2.38E-19 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 Pfam PF14930 Quinohemoprotein amine dehydrogenase, alpha subunit domain II 207 309 4.4E-41 T 13-09-2016 IPR009111 Quinohemoprotein amine dehydrogenase, alpha subunit, domain 2 PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 SUPERFAMILY SSF46626 33 112 1.01E-16 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 Gene3D G3DSA:2.40.128.120 205 311 3.8E-43 T 13-09-2016 IPR009111 Quinohemoprotein amine dehydrogenase, alpha subunit, domain 2 PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 Gene3D G3DSA:1.10.760.10 32 98 5.9E-4 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 Gene3D G3DSA:2.60.40.10 314 391 3.8E-28 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 SUPERFAMILY SSF81296 393 526 2.24E-52 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 SUPERFAMILY SSF69298 192 309 2.49E-43 T 13-09-2016 IPR009111 Quinohemoprotein amine dehydrogenase, alpha subunit, domain 2 PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 SUPERFAMILY SSF46626 116 194 2.59E-39 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 Gene3D G3DSA:2.60.40.10 393 518 1.8E-53 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 Pfam PF09100 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV 397 525 4.4E-53 T 13-09-2016 IPR015184 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 Pfam PF09098 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding 33 196 5.2E-74 T 13-09-2016 IPR015182 Quinohemoprotein amine dehydrogenase, alpha subunit, haem binding domain PMA3_RS20260 0437cad0a62b7ee7699fcc1ec1003706 526 TIGRFAM TIGR03908 QH_alpha: quinohemoprotein amine dehydrogenase, alpha subunit 28 525 2.0E-227 T 13-09-2016 IPR023887 Quinohemoprotein amine dehydrogenase, alpha subunit PMA3_RS30330 0460bb41f42b25fb739faca2e09cf2d8 260 SMART SM00644 24 165 3.6E-26 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS30330 0460bb41f42b25fb739faca2e09cf2d8 260 SUPERFAMILY SSF47090 184 257 6.47E-19 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS30330 0460bb41f42b25fb739faca2e09cf2d8 260 Gene3D G3DSA:3.40.80.10 26 184 4.8E-55 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS30330 0460bb41f42b25fb739faca2e09cf2d8 260 PANTHER PTHR30417 5 258 4.6E-75 T 13-09-2016 PMA3_RS30330 0460bb41f42b25fb739faca2e09cf2d8 260 Gene3D G3DSA:1.10.101.10 201 255 2.0E-4 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS30330 0460bb41f42b25fb739faca2e09cf2d8 260 Pfam PF01471 Putative peptidoglycan binding domain 201 253 5.7E-9 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS30330 0460bb41f42b25fb739faca2e09cf2d8 260 SUPERFAMILY SSF55846 21 181 2.36E-50 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS30330 0460bb41f42b25fb739faca2e09cf2d8 260 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 33 166 1.7E-22 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS24050 0c482b5a3dccbcd68adbf94467afef9f 344 PANTHER PTHR10457:SF4 2 303 7.8E-39 T 13-09-2016 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 PMA3_RS24050 0c482b5a3dccbcd68adbf94467afef9f 344 Gene3D G3DSA:3.30.70.890 219 304 9.6E-7 T 13-09-2016 IPR013750 GHMP kinase, C-terminal domain PMA3_RS24050 0c482b5a3dccbcd68adbf94467afef9f 344 SUPERFAMILY SSF54211 2 181 1.14E-37 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS24050 0c482b5a3dccbcd68adbf94467afef9f 344 SUPERFAMILY SSF55060 208 303 3.07E-6 T 13-09-2016 IPR013750 GHMP kinase, C-terminal domain PMA3_RS24050 0c482b5a3dccbcd68adbf94467afef9f 344 PANTHER PTHR10457 2 303 7.8E-39 T 13-09-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PMA3_RS24050 0c482b5a3dccbcd68adbf94467afef9f 344 Pfam PF00288 GHMP kinases N terminal domain 112 177 1.0E-12 T 13-09-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 PMA3_RS24050 0c482b5a3dccbcd68adbf94467afef9f 344 PRINTS PR00959 Mevalonate kinase family signature 7 31 2.2E-12 T 13-09-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PMA3_RS24050 0c482b5a3dccbcd68adbf94467afef9f 344 PRINTS PR00959 Mevalonate kinase family signature 116 138 2.2E-12 T 13-09-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 PMA3_RS24050 0c482b5a3dccbcd68adbf94467afef9f 344 Gene3D G3DSA:3.30.230.10 2 180 9.6E-41 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 PANTHER PTHR24322:SF439 152 184 2.2E-33 T 13-09-2016 PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 PANTHER PTHR24322 152 184 2.2E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.1E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 9.1E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.1E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 9.1E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 PANTHER PTHR24322:SF439 11 136 2.2E-33 T 13-09-2016 PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 SUPERFAMILY SSF51735 7 218 1.79E-44 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 PANTHER PTHR24322 11 136 2.2E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 Gene3D G3DSA:3.40.50.720 7 229 4.3E-43 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03805 dc084385a4b74b96f4c77bbb2ef5456e 260 Pfam PF00106 short chain dehydrogenase 11 188 5.2E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08845 5ffa152a38c3bdb02930f1ad9ce93ab8 183 Gene3D G3DSA:3.40.50.1000 38 176 1.1E-29 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS08845 5ffa152a38c3bdb02930f1ad9ce93ab8 183 Pfam PF13419 Haloacid dehalogenase-like hydrolase 50 150 1.2E-14 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS08845 5ffa152a38c3bdb02930f1ad9ce93ab8 183 SUPERFAMILY SSF56784 9 179 4.21E-34 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS08845 5ffa152a38c3bdb02930f1ad9ce93ab8 183 PANTHER PTHR12725 47 183 5.6E-22 T 13-09-2016 PMA3_RS08845 5ffa152a38c3bdb02930f1ad9ce93ab8 183 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 37 127 6.5E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS21345 4056b5e8bc6b7650d023220b386e845d 146 PANTHER PTHR34309 1 145 1.6E-59 T 13-09-2016 PMA3_RS21345 4056b5e8bc6b7650d023220b386e845d 146 SUPERFAMILY SSF143744 2 137 1.2E-31 T 13-09-2016 PMA3_RS21345 4056b5e8bc6b7650d023220b386e845d 146 PANTHER PTHR34309:SF3 1 145 1.6E-59 T 13-09-2016 PMA3_RS21345 4056b5e8bc6b7650d023220b386e845d 146 Pfam PF03928 Haem-degrading 4 134 5.5E-24 T 13-09-2016 IPR005624 Haem-degrading PMA3_RS07080 e03a66d15a246da159a9d6659a0bd007 131 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 38.451 T 13-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PMA3_RS07080 e03a66d15a246da159a9d6659a0bd007 131 SUPERFAMILY SSF51316 5 130 6.8E-60 T 13-09-2016 IPR011057 Mss4-like PMA3_RS07080 e03a66d15a246da159a9d6659a0bd007 131 PANTHER PTHR10173:SF18 2 131 4.6E-60 T 13-09-2016 PMA3_RS07080 e03a66d15a246da159a9d6659a0bd007 131 Gene3D G3DSA:2.170.150.20 3 130 1.7E-61 T 13-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PMA3_RS07080 e03a66d15a246da159a9d6659a0bd007 131 Pfam PF01641 SelR domain 10 128 9.0E-55 T 13-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PMA3_RS07080 e03a66d15a246da159a9d6659a0bd007 131 PANTHER PTHR10173 2 131 4.6E-60 T 13-09-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PMA3_RS07080 e03a66d15a246da159a9d6659a0bd007 131 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 130 1.0E-57 T 13-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PMA3_RS01965 21a1c4bab92253b51db60fc135720201 237 Gene3D G3DSA:3.40.50.10610 19 187 3.6E-16 T 13-09-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PMA3_RS01965 21a1c4bab92253b51db60fc135720201 237 SUPERFAMILY SSF159594 28 188 1.86E-24 T 13-09-2016 PMA3_RS01965 21a1c4bab92253b51db60fc135720201 237 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 30 185 1.5E-38 T 13-09-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 Pfam PF03466 LysR substrate binding domain 92 295 4.8E-42 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 Gene3D G3DSA:1.10.10.10 7 83 3.0E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 SUPERFAMILY SSF53850 92 296 5.2E-38 T 13-09-2016 PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 Gene3D G3DSA:3.40.190.10 180 267 4.3E-31 T 13-09-2016 PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 PANTHER PTHR30346 7 297 6.1E-82 T 13-09-2016 PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.6E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.6E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.6E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 Gene3D G3DSA:3.40.190.10 92 179 2.9E-25 T 13-09-2016 PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 9.5E-21 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 SUPERFAMILY SSF46785 7 115 3.43E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26125 b53715cfe7f567c8143fafba1e0fa0da 297 PANTHER PTHR30346:SF0 7 297 6.1E-82 T 13-09-2016 PMA3_RS03360 4749fddb1a57007f29f2a179d2dbad8d 406 PANTHER PTHR30199:SF0 3 394 4.3E-140 T 13-09-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PMA3_RS03360 4749fddb1a57007f29f2a179d2dbad8d 406 PANTHER PTHR30199 3 394 4.3E-140 T 13-09-2016 PMA3_RS03360 4749fddb1a57007f29f2a179d2dbad8d 406 Pfam PF03594 Benzoate membrane transport protein 6 383 1.6E-155 T 13-09-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PMA3_RS03360 4749fddb1a57007f29f2a179d2dbad8d 406 TIGRFAM TIGR00843 benE: benzoate transporter 3 384 3.3E-137 T 13-09-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 Gene3D G3DSA:1.10.287.130 217 285 1.3E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 SUPERFAMILY SSF47384 208 287 1.08E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 SMART SM00388 225 289 7.7E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 Gene3D G3DSA:3.30.565.10 313 440 1.3E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 SMART SM00387 334 440 1.6E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 288 2.0E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 PANTHER PTHR24423:SF474 163 439 1.3E-54 T 13-09-2016 PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 PANTHER PTHR24423 163 439 1.3E-54 T 13-09-2016 PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 Pfam PF08521 Two-component sensor kinase N-terminal 17 145 3.9E-7 T 13-09-2016 IPR013727 Two-component sensor kinase, N-terminal PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 SUPERFAMILY SSF55874 317 437 4.19E-29 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 3.0E-5 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 3.0E-5 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS07300 5999f761c2514295cbbfee2ad6724e2b 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 439 3.4E-16 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13010 e35b1753a51a9bc75f962c4434f1d3b9 190 PANTHER PTHR30529:SF3 2 182 1.6E-63 T 13-09-2016 PMA3_RS13010 e35b1753a51a9bc75f962c4434f1d3b9 190 PANTHER PTHR30529 2 182 1.6E-63 T 13-09-2016 PMA3_RS13010 e35b1753a51a9bc75f962c4434f1d3b9 190 Pfam PF01292 Prokaryotic cytochrome b561 9 179 9.0E-18 T 13-09-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PMA3_RS13010 e35b1753a51a9bc75f962c4434f1d3b9 190 SUPERFAMILY SSF81342 5 181 3.3E-29 T 13-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PMA3_RS00965 8894c52fac569babc7a45a9ef1ac9525 73 Gene3D G3DSA:3.30.429.20 1 65 2.7E-22 T 13-09-2016 PMA3_RS00965 8894c52fac569babc7a45a9ef1ac9525 73 Pfam PF01361 Tautomerase enzyme 2 56 4.0E-15 T 13-09-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 PMA3_RS00965 8894c52fac569babc7a45a9ef1ac9525 73 SUPERFAMILY SSF55331 2 65 5.07E-19 T 13-09-2016 IPR014347 Tautomerase/MIF superfamily PMA3_RS00965 8894c52fac569babc7a45a9ef1ac9525 73 PANTHER PTHR35530:SF1 1 65 3.7E-17 T 13-09-2016 PMA3_RS00965 8894c52fac569babc7a45a9ef1ac9525 73 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 63 1.9E-18 T 13-09-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 PMA3_RS00965 8894c52fac569babc7a45a9ef1ac9525 73 PANTHER PTHR35530 1 65 3.7E-17 T 13-09-2016 PMA3_RS16935 d823d03ffd65f2d50e25b9b61a3b4f25 156 PANTHER PTHR38599:SF1 67 154 5.4E-13 T 13-09-2016 PMA3_RS16935 d823d03ffd65f2d50e25b9b61a3b4f25 156 Gene3D G3DSA:2.60.120.10 39 143 3.6E-24 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS16935 d823d03ffd65f2d50e25b9b61a3b4f25 156 Pfam PF07883 Cupin domain 74 138 3.0E-18 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS16935 d823d03ffd65f2d50e25b9b61a3b4f25 156 PANTHER PTHR38599 67 154 5.4E-13 T 13-09-2016 PMA3_RS16935 d823d03ffd65f2d50e25b9b61a3b4f25 156 SUPERFAMILY SSF51182 49 142 1.49E-22 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 PANTHER PTHR22594:SF4 11 498 7.1E-266 T 13-09-2016 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 1.5E-36 T 13-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 1.5E-36 T 13-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 1.5E-36 T 13-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 1.5E-36 T 13-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 380 396 1.5E-36 T 13-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 Gene3D G3DSA:2.40.50.140 15 148 2.7E-39 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 SUPERFAMILY SSF50249 12 149 2.18E-35 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 SUPERFAMILY SSF55681 156 496 8.71E-123 T 13-09-2016 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 498 43.669 T 13-09-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 16 498 2.2E-201 T 13-09-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 Pfam PF01336 OB-fold nucleic acid binding domain 67 139 8.2E-8 T 13-09-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 Gene3D G3DSA:3.30.930.10 151 494 1.9E-121 T 13-09-2016 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 Pfam PF00152 tRNA synthetases class II (D, K and N) 157 495 1.1E-82 T 13-09-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS04615 64b82d0c500c8c76a6efbcec80113cfb 499 PANTHER PTHR22594 11 498 7.1E-266 T 13-09-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PANTHER PTHR30222 1 365 8.4E-163 T 13-09-2016 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 Pfam PF13416 Bacterial extracellular solute-binding protein 44 331 6.6E-34 T 13-09-2016 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PIRSF PIRSF019574 2 366 6.4E-133 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 Gene3D G3DSA:3.40.190.10 42 133 8.7E-5 T 13-09-2016 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PANTHER PTHR30222:SF11 1 365 8.4E-163 T 13-09-2016 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 Gene3D G3DSA:3.40.190.10 134 315 9.2E-69 T 13-09-2016 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 265 284 1.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 1.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 310 336 1.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 178 197 1.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 215 234 1.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 155 169 1.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16730 e9f455a6f796274b8a26d9903591c95b 366 SUPERFAMILY SSF53850 27 365 6.27E-99 T 13-09-2016 PMA3_RS28945 0a2c289322672963b4e66a51962d8abe 212 SUPERFAMILY SSF52833 3 209 5.23E-65 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS28945 0a2c289322672963b4e66a51962d8abe 212 PANTHER PTHR10681 3 207 3.7E-90 T 13-09-2016 PMA3_RS28945 0a2c289322672963b4e66a51962d8abe 212 PIRSF PIRSF000239 1 209 4.8E-75 T 13-09-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PMA3_RS28945 0a2c289322672963b4e66a51962d8abe 212 Gene3D G3DSA:3.30.1020.10 158 211 2.1E-28 T 13-09-2016 PMA3_RS28945 0a2c289322672963b4e66a51962d8abe 212 PANTHER PTHR10681:SF99 3 207 3.7E-90 T 13-09-2016 PMA3_RS28945 0a2c289322672963b4e66a51962d8abe 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 195 1.5E-10 T 13-09-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS28945 0a2c289322672963b4e66a51962d8abe 212 Gene3D G3DSA:3.40.30.10 4 157 2.7E-58 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS28945 0a2c289322672963b4e66a51962d8abe 212 Pfam PF00578 AhpC/TSA family 6 134 1.8E-29 T 13-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 Gene3D G3DSA:1.20.200.10 107 373 4.6E-86 T 13-09-2016 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 9 352 4.5E-142 T 13-09-2016 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 PANTHER PTHR11444:SF21 9 446 7.1E-207 T 13-09-2016 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 Pfam PF10397 Adenylosuccinate lyase C-terminus 368 445 8.3E-18 T 13-09-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 3.5E-10 T 13-09-2016 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 PRINTS PR00145 Argininosuccinate lyase family signature 234 258 3.5E-10 T 13-09-2016 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 3.5E-10 T 13-09-2016 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 3.5E-10 T 13-09-2016 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 Pfam PF00206 Lyase 16 304 1.8E-67 T 13-09-2016 IPR022761 Fumarate lyase, N-terminal PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 Gene3D G3DSA:1.10.40.30 374 446 9.1E-29 T 13-09-2016 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 PANTHER PTHR11444 9 446 7.1E-207 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 13-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 Gene3D G3DSA:1.10.275.10 13 106 6.2E-34 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 SUPERFAMILY SSF48557 9 449 1.73E-122 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 2.9E-25 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 2.9E-25 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 2.9E-25 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 PRINTS PR00149 Fumarate lyase superfamily signature 234 261 2.9E-25 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS05420 7fc61b5e79e2fd10aa2af7f897f71b98 454 SMART SM00998 367 446 4.8E-27 T 13-09-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PMA3_RS01330 c6e6bc20ac7b971c20ba4da2877dfc1f 265 PANTHER PTHR18966:SF152 12 260 4.6E-81 T 13-09-2016 PMA3_RS01330 c6e6bc20ac7b971c20ba4da2877dfc1f 265 Gene3D G3DSA:3.40.190.10 112 217 1.7E-15 T 13-09-2016 PMA3_RS01330 c6e6bc20ac7b971c20ba4da2877dfc1f 265 SMART SM00079 34 257 4.2E-5 T 13-09-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PMA3_RS01330 c6e6bc20ac7b971c20ba4da2877dfc1f 265 SMART SM00062 34 257 3.6E-58 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS01330 c6e6bc20ac7b971c20ba4da2877dfc1f 265 PANTHER PTHR18966 12 260 4.6E-81 T 13-09-2016 PMA3_RS01330 c6e6bc20ac7b971c20ba4da2877dfc1f 265 SUPERFAMILY SSF53850 1 257 2.52E-67 T 13-09-2016 PMA3_RS01330 c6e6bc20ac7b971c20ba4da2877dfc1f 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 256 7.0E-56 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS01330 c6e6bc20ac7b971c20ba4da2877dfc1f 265 Gene3D G3DSA:3.40.190.10 31 111 1.1E-38 T 13-09-2016 PMA3_RS01330 c6e6bc20ac7b971c20ba4da2877dfc1f 265 Gene3D G3DSA:3.40.190.10 218 257 1.1E-38 T 13-09-2016 PMA3_RS22285 c3274ba4149d129e6529dd71ed960bee 308 SMART SM00797 25 305 4.2E-119 T 13-09-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PMA3_RS22285 c3274ba4149d129e6529dd71ed960bee 308 Pfam PF02626 Allophanate hydrolase subunit 2 26 287 1.6E-75 T 13-09-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PMA3_RS22285 c3274ba4149d129e6529dd71ed960bee 308 PANTHER PTHR18866:SF74 152 265 2.0E-30 T 13-09-2016 PMA3_RS22285 c3274ba4149d129e6529dd71ed960bee 308 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 5 297 2.9E-71 T 13-09-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PMA3_RS22285 c3274ba4149d129e6529dd71ed960bee 308 PANTHER PTHR18866 152 265 2.0E-30 T 13-09-2016 PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 524 546 3.0E-6 T 13-09-2016 IPR010609 Gp5, C-terminal PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 Gene3D G3DSA:2.40.50.230 381 463 2.1E-37 T 13-09-2016 IPR006531 Gp5 N-terminal PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 31 516 2.1E-131 T 13-09-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 PANTHER PTHR32305:SF7 8 604 5.7E-121 T 13-09-2016 PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 SUPERFAMILY SSF69279 23 194 1.06E-51 T 13-09-2016 PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 SUPERFAMILY SSF69279 201 375 9.86E-32 T 13-09-2016 PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 Gene3D G3DSA:3.55.50.10 106 197 7.7E-30 T 13-09-2016 PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 SUPERFAMILY SSF69349 453 607 2.98E-34 T 13-09-2016 PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 Pfam PF05954 Phage late control gene D protein (GPD) 38 345 8.6E-92 T 13-09-2016 PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 SUPERFAMILY SSF69255 375 463 6.8E-33 T 13-09-2016 PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 23 534 1.2E-186 T 13-09-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PMA3_RS11380 14365387fb7516719a632b7d159c36bf 616 PANTHER PTHR32305 8 604 5.7E-121 T 13-09-2016 PMA3_RS25835 846624979c7aa93d9184556b139d990d 303 PANTHER PTHR30537 1 294 2.3E-161 T 13-09-2016 PMA3_RS25835 846624979c7aa93d9184556b139d990d 303 Gene3D G3DSA:1.10.10.10 6 88 9.5E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25835 846624979c7aa93d9184556b139d990d 303 Gene3D G3DSA:3.40.190.10 179 258 8.2E-20 T 13-09-2016 PMA3_RS25835 846624979c7aa93d9184556b139d990d 303 Gene3D G3DSA:3.40.190.10 93 178 2.9E-25 T 13-09-2016 PMA3_RS25835 846624979c7aa93d9184556b139d990d 303 PANTHER PTHR30537:SF20 1 294 2.3E-161 T 13-09-2016 PMA3_RS25835 846624979c7aa93d9184556b139d990d 303 SUPERFAMILY SSF46785 6 113 7.02E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25835 846624979c7aa93d9184556b139d990d 303 Pfam PF03466 LysR substrate binding domain 89 293 2.6E-43 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS25835 846624979c7aa93d9184556b139d990d 303 SUPERFAMILY SSF53850 90 296 3.72E-43 T 13-09-2016 PMA3_RS25835 846624979c7aa93d9184556b139d990d 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.5E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 PANTHER PTHR10799:SF774 31 175 4.3E-34 T 13-09-2016 PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 PANTHER PTHR10799:SF774 386 508 4.3E-34 T 13-09-2016 PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 SMART SM00267 342 514 1.9E-58 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 Gene3D G3DSA:3.30.70.270 355 513 1.2E-54 T 13-09-2016 PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 SMART SM01079 70 267 4.6E-4 T 13-09-2016 IPR006189 CHASE domain PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 352 513 2.4E-45 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 509 1.8E-49 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 SUPERFAMILY SSF55073 358 513 9.42E-50 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 Pfam PF03924 CHASE domain 78 227 2.4E-10 T 13-09-2016 IPR006189 CHASE domain PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 PANTHER PTHR10799 31 175 4.3E-34 T 13-09-2016 PMA3_RS26050 a36bb45dbe3988107b12ed93e05e2989 519 PANTHER PTHR10799 386 508 4.3E-34 T 13-09-2016 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 Gene3D G3DSA:1.10.287.950 407 623 6.5E-58 T 13-09-2016 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 PANTHER PTHR32089:SF64 257 272 1.9E-121 T 13-09-2016 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 SMART SM00304 325 377 1.4E-13 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 SMART SM00304 378 430 12.0 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 321 1.7E-21 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 519 548 1.7E-21 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 517 1.7E-21 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 SMART SM00283 392 653 7.4E-76 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 PANTHER PTHR32089:SF64 299 654 1.9E-121 T 13-09-2016 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 SMART SM01358 37 303 4.0E-44 T 13-09-2016 IPR032255 Helical bimodular sensor domain PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 Pfam PF16591 Helical bimodular sensor domain 39 294 5.7E-8 T 13-09-2016 IPR032255 Helical bimodular sensor domain PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 PANTHER PTHR32089 257 272 1.9E-121 T 13-09-2016 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 PANTHER PTHR32089 299 654 1.9E-121 T 13-09-2016 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 SUPERFAMILY SSF58104 345 654 1.44E-73 T 13-09-2016 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 Pfam PF00672 HAMP domain 306 372 2.7E-18 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS06065 87a61d003dc01db98733cde23ecfc575 654 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 652 8.5E-46 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 PANTHER PTHR13710 507 562 1.9E-160 T 13-09-2016 PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 Pfam PF16124 RecQ zinc-binding 509 555 9.5E-8 T 13-09-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 129 138 - T 13-09-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 Pfam PF00270 DEAD/DEAH box helicase 16 176 5.5E-16 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 Gene3D G3DSA:3.40.50.300 3 183 1.3E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 Gene3D G3DSA:1.10.10.10 510 639 6.9E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 PANTHER PTHR13710 1 340 1.9E-160 T 13-09-2016 PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 SMART SM00487 10 206 5.6E-25 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 PANTHER PTHR13710:SF81 507 562 1.9E-160 T 13-09-2016 PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 Pfam PF00271 Helicase conserved C-terminal domain 213 321 8.1E-19 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 PANTHER PTHR13710:SF81 1 340 1.9E-160 T 13-09-2016 PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 SUPERFAMILY SSF52540 55 338 6.97E-58 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 SMART SM00490 240 321 1.0E-27 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 4 342 1.6E-110 T 13-09-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 PMA3_RS00855 3d102494ce10656a3a92f9acd29e0373 642 Gene3D G3DSA:3.40.50.300 196 333 2.6E-39 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07900 0b827e16a4e5a808d134f537e8d83e82 177 Pfam PF03079 ARD/ARD' family 20 158 4.2E-23 T 13-09-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 PMA3_RS07900 0b827e16a4e5a808d134f537e8d83e82 177 Gene3D G3DSA:2.60.120.10 5 175 2.6E-38 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS07900 0b827e16a4e5a808d134f537e8d83e82 177 SUPERFAMILY SSF51182 3 174 2.04E-29 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS07900 0b827e16a4e5a808d134f537e8d83e82 177 PANTHER PTHR23418 62 158 4.2E-17 T 13-09-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 PMA3_RS07900 0b827e16a4e5a808d134f537e8d83e82 177 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 168 28.173 T 13-09-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389|UniPathway: UPA00904 PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.8E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.8E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.8E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.8E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.8E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.8E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 7.5E-5 T 13-09-2016 PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PANTHER PTHR24322 10 139 3.4E-55 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.0E-16 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.0E-16 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 9.0E-16 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 6 247 2.7E-110 T 13-09-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PANTHER PTHR24322:SF328 10 139 3.4E-55 T 13-09-2016 PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 Gene3D G3DSA:3.40.50.720 5 247 4.3E-86 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 SUPERFAMILY SSF51735 5 247 2.11E-82 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 Pfam PF00106 short chain dehydrogenase 7 199 9.9E-64 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PANTHER PTHR24322 155 186 3.4E-55 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13900 3339eb0a465f19036a830980a12943f6 248 PANTHER PTHR24322:SF328 155 186 3.4E-55 T 13-09-2016 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.3E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.3E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.3E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 Gene3D G3DSA:1.10.10.10 139 209 1.0E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 Gene3D G3DSA:3.40.50.2300 3 132 5.6E-28 T 13-09-2016 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 Pfam PF00072 Response regulator receiver domain 6 119 1.0E-20 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 SMART SM00421 150 207 3.0E-23 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 2.4E-18 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 SUPERFAMILY SSF46894 144 211 7.48E-20 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 PANTHER PTHR26402:SF474 4 210 1.1E-73 T 13-09-2016 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 PANTHER PTHR26402 4 210 1.1E-73 T 13-09-2016 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 SMART SM00448 4 119 1.8E-17 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05030 c440162022c3fbc5ec55f17be717e135 216 SUPERFAMILY SSF52172 4 131 2.28E-24 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 SUPERFAMILY SSF53335 135 431 1.28E-68 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 6 430 1.7E-122 T 13-09-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 PANTHER PTHR22807:SF30 28 431 1.3E-115 T 13-09-2016 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 Gene3D G3DSA:1.10.940.10 1 144 6.0E-42 T 13-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 PANTHER PTHR22807 28 431 1.3E-115 T 13-09-2016 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 Gene3D G3DSA:3.40.50.150 229 430 1.6E-50 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 Gene3D G3DSA:1.10.287.730 145 169 4.5E-12 T 13-09-2016 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 314 325 - T 13-09-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 Gene3D G3DSA:3.30.70.1170 170 227 2.7E-23 T 13-09-2016 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 Pfam PF01029 NusB family 1 123 1.6E-23 T 13-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 428 1.5E-59 T 13-09-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 SUPERFAMILY SSF48013 1 146 2.62E-34 T 13-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 413 430 1.3E-26 T 13-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 365 381 1.3E-26 T 13-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 327 1.3E-26 T 13-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.3E-26 T 13-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS30165 4afeb41a26b3f2271449c8903025899a 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.3E-26 T 13-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS14935 befc380687ea5cc26dbaef0ecba4fba5 199 SUPERFAMILY SSF53335 3 161 1.59E-20 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS14935 befc380687ea5cc26dbaef0ecba4fba5 199 Pfam PF05401 Nodulation protein S (NodS) 16 141 1.2E-13 T 13-09-2016 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PMA3_RS14935 befc380687ea5cc26dbaef0ecba4fba5 199 Gene3D G3DSA:3.40.50.150 19 149 4.9E-15 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 SUPERFAMILY SSF50331 238 358 1.41E-18 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 SUPERFAMILY SSF52540 6 222 7.45E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 Pfam PF03459 TOBE domain 295 357 5.2E-14 T 13-09-2016 IPR005116 Transport-associated OB, type 1 PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 357 8.5E-138 T 13-09-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 PANTHER PTHR24220:SF284 1 229 3.3E-97 T 13-09-2016 PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 SMART SM00382 23 210 3.8E-14 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 PANTHER PTHR24220 1 229 3.3E-97 T 13-09-2016 PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 Pfam PF00005 ABC transporter 16 160 5.1E-29 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 Gene3D G3DSA:3.40.50.300 16 223 7.1E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16010 02762b0f73cec10a89f0945c982339eb 359 Gene3D G3DSA:2.40.50.100 282 355 1.3E-16 T 13-09-2016 PMA3_RS13455 66724f05d37c82292b485cede1aa5deb 711 PANTHER PTHR30509 3 256 3.2E-103 T 13-09-2016 PMA3_RS13455 66724f05d37c82292b485cede1aa5deb 711 PANTHER PTHR30509 332 672 3.2E-103 T 13-09-2016 PMA3_RS13455 66724f05d37c82292b485cede1aa5deb 711 Pfam PF04632 Fusaric acid resistance protein family 19 677 3.2E-138 T 13-09-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PMA3_RS13455 66724f05d37c82292b485cede1aa5deb 711 PANTHER PTHR30509:SF1 3 256 3.2E-103 T 13-09-2016 PMA3_RS13455 66724f05d37c82292b485cede1aa5deb 711 PANTHER PTHR30509:SF1 332 672 3.2E-103 T 13-09-2016 PMA3_RS02335 d1b0915ed5921fad9a166d72c7fe6aae 295 Pfam PF00892 EamA-like transporter family 7 135 7.9E-21 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS02335 d1b0915ed5921fad9a166d72c7fe6aae 295 Pfam PF00892 EamA-like transporter family 150 280 4.8E-19 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS02335 d1b0915ed5921fad9a166d72c7fe6aae 295 SUPERFAMILY SSF103481 35 138 9.29E-14 T 13-09-2016 PMA3_RS02335 d1b0915ed5921fad9a166d72c7fe6aae 295 PANTHER PTHR12715:SF12 3 291 8.2E-82 T 13-09-2016 PMA3_RS02335 d1b0915ed5921fad9a166d72c7fe6aae 295 PANTHER PTHR12715 3 291 8.2E-82 T 13-09-2016 PMA3_RS02335 d1b0915ed5921fad9a166d72c7fe6aae 295 SUPERFAMILY SSF103481 185 281 4.71E-10 T 13-09-2016 PMA3_RS10035 5633172856c4e63a062404e279a8bdc5 446 Gene3D G3DSA:3.90.230.10 209 441 2.6E-33 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS10035 5633172856c4e63a062404e279a8bdc5 446 Pfam PF01321 Creatinase/Prolidase N-terminal domain 64 193 3.7E-5 T 13-09-2016 IPR000587 Creatinase, N-terminal GO:0016787 PMA3_RS10035 5633172856c4e63a062404e279a8bdc5 446 Pfam PF00557 Metallopeptidase family M24 219 428 3.0E-22 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS10035 5633172856c4e63a062404e279a8bdc5 446 SUPERFAMILY SSF53092 62 192 2.56E-7 T 13-09-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PMA3_RS10035 5633172856c4e63a062404e279a8bdc5 446 SUPERFAMILY SSF55920 211 441 7.2E-45 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS10035 5633172856c4e63a062404e279a8bdc5 446 Gene3D G3DSA:3.40.350.10 63 185 6.3E-6 T 13-09-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 PANTHER PTHR10359 4 342 1.2E-104 T 13-09-2016 PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 SMART SM00478 39 190 4.3E-43 T 13-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 277 1.1E-109 T 13-09-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 SUPERFAMILY SSF48150 3 225 7.54E-76 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 166 3.5E-19 T 13-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 Pfam PF14815 NUDIX domain 238 343 2.0E-19 T 13-09-2016 IPR029119 MutY, C-terminal PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 SUPERFAMILY SSF55811 220 345 3.34E-23 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 13-09-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 Gene3D G3DSA:3.90.79.10 235 345 6.9E-20 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 Gene3D G3DSA:1.10.1670.10 123 223 5.2E-37 T 13-09-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.0E-6 T 13-09-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 PMA3_RS01065 cb4cdc1bc5f4fe74df0e21b98ba8ae62 355 Gene3D G3DSA:1.10.340.30 22 122 3.4E-43 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS12005 09b975d0e9cb1135d928a111fd2a3f43 541 Pfam PF00171 Aldehyde dehydrogenase family 63 505 9.2E-93 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS12005 09b975d0e9cb1135d928a111fd2a3f43 541 Gene3D G3DSA:3.40.309.10 300 485 1.1E-45 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS12005 09b975d0e9cb1135d928a111fd2a3f43 541 Gene3D G3DSA:3.40.605.10 32 299 1.4E-51 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS12005 09b975d0e9cb1135d928a111fd2a3f43 541 PANTHER PTHR11699 9 541 0.0 T 13-09-2016 PMA3_RS12005 09b975d0e9cb1135d928a111fd2a3f43 541 PANTHER PTHR11699:SF69 9 541 0.0 T 13-09-2016 PMA3_RS12005 09b975d0e9cb1135d928a111fd2a3f43 541 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS12005 09b975d0e9cb1135d928a111fd2a3f43 541 SUPERFAMILY SSF53720 31 512 1.83E-99 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS11955 4888be92bf44261828444f2d0105b334 154 SUPERFAMILY SSF52172 4 145 9.53E-31 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS11955 4888be92bf44261828444f2d0105b334 154 Gene3D G3DSA:3.40.50.2300 3 131 1.4E-29 T 13-09-2016 PMA3_RS11955 4888be92bf44261828444f2d0105b334 154 PANTHER PTHR26402 5 115 1.3E-27 T 13-09-2016 PMA3_RS11955 4888be92bf44261828444f2d0105b334 154 Pfam PF00072 Response regulator receiver domain 7 115 2.1E-24 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS11955 4888be92bf44261828444f2d0105b334 154 SMART SM00448 5 120 7.3E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS10215 ec25381cae9202edf7ba3cd6cda94cfe 399 SUPERFAMILY SSF103473 9 386 1.15E-57 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS10215 ec25381cae9202edf7ba3cd6cda94cfe 399 Pfam PF07690 Major Facilitator Superfamily 20 331 6.3E-33 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS10215 ec25381cae9202edf7ba3cd6cda94cfe 399 PANTHER PTHR23501:SF28 11 386 3.6E-166 T 13-09-2016 PMA3_RS10215 ec25381cae9202edf7ba3cd6cda94cfe 399 PANTHER PTHR23501 11 386 3.6E-166 T 13-09-2016 PMA3_RS10215 ec25381cae9202edf7ba3cd6cda94cfe 399 Gene3D G3DSA:1.20.1250.20 212 385 5.1E-15 T 13-09-2016 PMA3_RS10215 ec25381cae9202edf7ba3cd6cda94cfe 399 Gene3D G3DSA:1.20.1250.20 16 192 2.6E-29 T 13-09-2016 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 Gene3D G3DSA:3.20.20.70 11 394 8.4E-149 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 13-09-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 8 552 54.561 T 13-09-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 550 7.3E-28 T 13-09-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 13-09-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 SUPERFAMILY SSF110921 445 549 2.88E-29 T 13-09-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 SMART SM00917 422 551 3.1E-29 T 13-09-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 SUPERFAMILY SSF51569 22 330 8.24E-99 T 13-09-2016 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 Pfam PF00682 HMGL-like 33 313 1.3E-76 T 13-09-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 SUPERFAMILY SSF89000 388 438 1.1E-14 T 13-09-2016 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 PANTHER PTHR10277:SF28 1 559 1.6E-286 T 13-09-2016 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 PANTHER PTHR10277 1 559 1.6E-286 T 13-09-2016 PMA3_RS24180 b6d76e2a6b6a5d17e7f4993928ea9287 559 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 7 550 3.9E-239 T 13-09-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 59.684 T 13-09-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 PANTHER PTHR18919 3 391 3.3E-197 T 13-09-2016 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 13-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 3.9E-137 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 PIRSF PIRSF000429 2 391 7.9E-136 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 4.7E-235 T 13-09-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 13-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 Gene3D G3DSA:3.40.47.10 188 271 1.2E-63 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 Gene3D G3DSA:3.40.47.10 7 130 1.2E-63 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 SUPERFAMILY SSF53901 4 262 4.76E-80 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 13-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 Pfam PF00108 Thiolase, N-terminal domain 8 257 3.2E-85 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 SUPERFAMILY SSF53901 266 390 9.3E-44 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 PANTHER PTHR18919:SF69 3 391 3.3E-197 T 13-09-2016 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.2E-49 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 Gene3D G3DSA:3.40.47.10 272 390 2.7E-57 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS08610 70ef0faa8d7a09ecdeefa0fa32dc1c0c 391 Gene3D G3DSA:3.40.47.10 143 187 2.7E-57 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 SUPERFAMILY SSF82693 271 328 2.28E-21 T 13-09-2016 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 SUPERFAMILY SSF82693 137 184 2.28E-21 T 13-09-2016 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 PANTHER PTHR32063:SF19 2 1049 0.0 T 13-09-2016 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 Gene3D G3DSA:3.30.2090.10 185 269 9.9E-18 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 Gene3D G3DSA:3.30.2090.10 724 807 8.1E-17 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 SUPERFAMILY SSF82714 723 807 5.1E-16 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 Gene3D G3DSA:1.10.3850.10 276 507 2.5E-64 T 13-09-2016 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 Gene3D G3DSA:1.10.3850.10 815 1038 4.0E-50 T 13-09-2016 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 Pfam PF00873 AcrB/AcrD/AcrF family 6 1035 3.9E-237 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 Gene3D G3DSA:3.30.70.1430 46 142 4.5E-24 T 13-09-2016 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 SUPERFAMILY SSF82866 805 1039 1.57E-45 T 13-09-2016 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 SUPERFAMILY SSF82714 185 270 6.41E-18 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 PANTHER PTHR32063 2 1049 0.0 T 13-09-2016 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 SUPERFAMILY SSF82693 46 127 2.88E-20 T 13-09-2016 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 SUPERFAMILY SSF82866 294 506 5.23E-39 T 13-09-2016 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 6.7E-25 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 6.7E-25 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 6.7E-25 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.7E-25 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.7E-25 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 6.7E-25 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS06420 0bb88b6e90314c306229ec1c6448fd76 1052 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 13-09-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 804 4.3E-300 T 13-09-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 Gene3D G3DSA:3.30.230.10 221 393 4.9E-72 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 174 4.2E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 SMART SM00433 37 798 1.3E-271 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 Gene3D G3DSA:3.40.50.670 719 787 3.2E-101 T 13-09-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 Gene3D G3DSA:3.40.50.670 405 551 3.2E-101 T 13-09-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 SMART SM00387 33 177 5.8E-28 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 SUPERFAMILY SSF54211 222 393 6.64E-58 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 805 100.355 T 13-09-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 SUPERFAMILY SSF56719 395 561 8.37E-88 T 13-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 SUPERFAMILY SSF56719 731 795 8.37E-88 T 13-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 SUPERFAMILY SSF55874 7 219 3.01E-73 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR00418 DNA topoisomerase II family signature 115 129 2.9E-71 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 2.9E-71 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR00418 DNA topoisomerase II family signature 72 85 2.9E-71 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 2.9E-71 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 2.9E-71 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 2.9E-71 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR00418 DNA topoisomerase II family signature 37 52 2.9E-71 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 2.9E-71 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 2.9E-71 T 13-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 Pfam PF00204 DNA gyrase B 222 391 3.0E-55 T 13-09-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 Gene3D G3DSA:3.30.565.10 7 219 2.3E-90 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PANTHER PTHR10169 725 804 0.0 T 13-09-2016 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PANTHER PTHR10169 5 554 0.0 T 13-09-2016 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 794 4.8E-30 T 13-09-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.4E-75 T 13-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.4E-75 T 13-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR01159 DNA gyrase subunit B signature 182 197 1.4E-75 T 13-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR01159 DNA gyrase subunit B signature 221 243 1.4E-75 T 13-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.4E-75 T 13-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR01159 DNA gyrase subunit B signature 197 210 1.4E-75 T 13-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.4E-75 T 13-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.4E-75 T 13-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.4E-75 T 13-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 PRINTS PR01159 DNA gyrase subunit B signature 7 17 1.4E-75 T 13-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 13-09-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS30110 d90d048a29214ec9f01b01a9722e550c 805 Pfam PF01751 Toprim domain 420 531 3.2E-17 T 13-09-2016 IPR006171 Toprim domain PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 PANTHER PTHR11702:SF3 1 391 6.2E-172 T 13-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.0E-33 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.0E-33 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.0E-33 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.0E-33 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 SUPERFAMILY SSF52540 151 334 1.54E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 6.4E-144 T 13-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 PANTHER PTHR11702 1 391 6.2E-172 T 13-09-2016 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.083 T 13-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 Gene3D G3DSA:3.40.50.300 160 336 2.8E-47 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.3E-21 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 SUPERFAMILY SSF82051 2 158 2.22E-56 T 13-09-2016 IPR006169 GTP1/OBG domain GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 PIRSF PIRSF002401 1 380 2.6E-135 T 13-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 Pfam PF01018 GTP1/OBG 3 158 4.2E-61 T 13-09-2016 IPR006169 GTP1/OBG domain GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 Gene3D G3DSA:2.70.210.12 2 156 7.8E-60 T 13-09-2016 IPR006169 GTP1/OBG domain GO:0005525 PMA3_RS03185 1012709c9ea22905abced0271be2edae 407 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 13-09-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 PMA3_RS07915 7335deb134af222d3df75644584cc611 172 PRINTS PR01415 Ankyrin repeat signature 130 144 1.9E-5 T 13-09-2016 IPR002110 Ankyrin repeat GO:0005515 PMA3_RS07915 7335deb134af222d3df75644584cc611 172 PRINTS PR01415 Ankyrin repeat signature 49 64 1.9E-5 T 13-09-2016 IPR002110 Ankyrin repeat GO:0005515 PMA3_RS07915 7335deb134af222d3df75644584cc611 172 SUPERFAMILY SSF48403 25 168 3.11E-38 T 13-09-2016 IPR020683 Ankyrin repeat-containing domain PMA3_RS07915 7335deb134af222d3df75644584cc611 172 Pfam PF12796 Ankyrin repeats (3 copies) 80 145 2.7E-10 T 13-09-2016 IPR020683 Ankyrin repeat-containing domain PMA3_RS07915 7335deb134af222d3df75644584cc611 172 Pfam PF12796 Ankyrin repeats (3 copies) 24 79 3.7E-8 T 13-09-2016 IPR020683 Ankyrin repeat-containing domain PMA3_RS07915 7335deb134af222d3df75644584cc611 172 PANTHER PTHR24198 24 167 5.3E-38 T 13-09-2016 PMA3_RS07915 7335deb134af222d3df75644584cc611 172 SMART SM00248 48 77 3.1E-6 T 13-09-2016 IPR002110 Ankyrin repeat GO:0005515 PMA3_RS07915 7335deb134af222d3df75644584cc611 172 SMART SM00248 114 143 8.9E-6 T 13-09-2016 IPR002110 Ankyrin repeat GO:0005515 PMA3_RS07915 7335deb134af222d3df75644584cc611 172 SMART SM00248 81 110 230.0 T 13-09-2016 IPR002110 Ankyrin repeat GO:0005515 PMA3_RS07915 7335deb134af222d3df75644584cc611 172 Gene3D G3DSA:1.25.40.20 24 168 1.8E-39 T 13-09-2016 IPR020683 Ankyrin repeat-containing domain PMA3_RS11305 81c6034ffbdc0db4b2be56267b71e1d7 447 PANTHER PTHR35566 1 446 3.3E-103 T 13-09-2016 PMA3_RS11305 81c6034ffbdc0db4b2be56267b71e1d7 447 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 446 9.3E-140 T 13-09-2016 IPR010263 Type VI secretion protein, VC_A0114 PMA3_RS11305 81c6034ffbdc0db4b2be56267b71e1d7 447 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 445 2.3E-135 T 13-09-2016 IPR010263 Type VI secretion protein, VC_A0114 PMA3_RS00875 7941f581627f4bd3bdd8d83b97008125 284 PANTHER PTHR30592 16 279 2.0E-91 T 13-09-2016 PMA3_RS00875 7941f581627f4bd3bdd8d83b97008125 284 PIRSF PIRSF015626 12 282 2.6E-65 T 13-09-2016 IPR003786 Protein FdhD GO:0016783 PMA3_RS00875 7941f581627f4bd3bdd8d83b97008125 284 PANTHER PTHR30592:SF1 16 279 2.0E-91 T 13-09-2016 PMA3_RS00875 7941f581627f4bd3bdd8d83b97008125 284 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 43 277 1.2E-47 T 13-09-2016 IPR003786 Protein FdhD GO:0016783 PMA3_RS00875 7941f581627f4bd3bdd8d83b97008125 284 Gene3D G3DSA:3.40.140.10 154 278 2.7E-39 T 13-09-2016 PMA3_RS00875 7941f581627f4bd3bdd8d83b97008125 284 Pfam PF02634 FdhD/NarQ family 45 278 7.3E-63 T 13-09-2016 IPR003786 Protein FdhD GO:0016783 PMA3_RS00875 7941f581627f4bd3bdd8d83b97008125 284 SUPERFAMILY SSF53927 35 277 1.53E-66 T 13-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 PMA3_RS00875 7941f581627f4bd3bdd8d83b97008125 284 Gene3D G3DSA:3.10.20.10 47 132 3.3E-25 T 13-09-2016 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 SMART SM00421 154 211 1.4E-22 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 SUPERFAMILY SSF52172 5 131 1.85E-30 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 PANTHER PTHR26402:SF458 4 208 1.5E-62 T 13-09-2016 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 SMART SM00448 4 117 4.9E-25 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 3.0E-20 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 1.5E-13 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 1.5E-13 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 1.5E-13 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 Pfam PF00072 Response regulator receiver domain 7 116 4.7E-24 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 Gene3D G3DSA:3.40.50.2300 5 129 1.3E-31 T 13-09-2016 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 PANTHER PTHR26402 4 208 1.5E-62 T 13-09-2016 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 SUPERFAMILY SSF46894 146 212 1.05E-19 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS11170 c297faaa3f0f8d75fbde8f14dc1ed02c 223 Gene3D G3DSA:1.10.10.10 144 212 4.8E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PRINTS PR00406 Cytochrome B5 reductase signature 127 146 1.1E-8 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PRINTS PR00406 Cytochrome B5 reductase signature 164 175 1.1E-8 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PRINTS PR00406 Cytochrome B5 reductase signature 220 228 1.1E-8 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PRINTS PR00406 Cytochrome B5 reductase signature 104 118 1.1E-8 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PRINTS PR00406 Cytochrome B5 reductase signature 67 74 1.1E-8 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 Gene3D G3DSA:2.40.30.10 20 106 4.7E-28 T 13-09-2016 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 SUPERFAMILY SSF52343 107 250 1.57E-36 T 13-09-2016 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PANTHER PTHR19370:SF89 19 272 3.0E-128 T 13-09-2016 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 Gene3D G3DSA:3.10.20.30 246 365 4.4E-30 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 290 359 2.8E-11 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PANTHER PTHR19370 19 272 3.0E-128 T 13-09-2016 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 SUPERFAMILY SSF63380 13 118 5.88E-28 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 SUPERFAMILY SSF54292 243 366 9.44E-28 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 220 228 5.3E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 164 175 5.3E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 127 146 5.3E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 67 74 5.3E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 Pfam PF00175 Oxidoreductase NAD-binding domain 129 234 1.9E-13 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 Pfam PF00970 Oxidoreductase FAD-binding domain 25 116 2.1E-16 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 316 324 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS27985 1ac38b68821d559d486f0b7ae21fe292 366 Gene3D G3DSA:3.40.50.80 107 245 1.1E-34 T 13-09-2016 PMA3_RS23305 faf9121d5547c9e589dd61dc43809119 141 PANTHER PTHR23089:SF13 22 129 3.4E-21 T 13-09-2016 PMA3_RS23305 faf9121d5547c9e589dd61dc43809119 141 Pfam PF01230 HIT domain 9 98 5.8E-17 T 13-09-2016 IPR001310 Histidine triad (HIT) protein PMA3_RS23305 faf9121d5547c9e589dd61dc43809119 141 SUPERFAMILY SSF54197 3 132 1.67E-33 T 13-09-2016 IPR011146 HIT-like domain GO:0003824 PMA3_RS23305 faf9121d5547c9e589dd61dc43809119 141 PIRSF PIRSF000714 1 137 3.5E-50 T 13-09-2016 IPR026026 Histidine triad hydrolase, Hint-type PMA3_RS23305 faf9121d5547c9e589dd61dc43809119 141 Gene3D G3DSA:3.30.428.10 4 133 3.2E-34 T 13-09-2016 IPR011146 HIT-like domain GO:0003824 PMA3_RS23305 faf9121d5547c9e589dd61dc43809119 141 PANTHER PTHR23089 22 129 3.4E-21 T 13-09-2016 IPR001310 Histidine triad (HIT) protein PMA3_RS26180 a98772e98bff8a504848396446d37496 136 Pfam PF00072 Response regulator receiver domain 15 97 1.3E-8 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS26180 a98772e98bff8a504848396446d37496 136 SUPERFAMILY SSF52172 15 129 4.41E-17 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS26180 a98772e98bff8a504848396446d37496 136 Gene3D G3DSA:3.40.50.2300 14 129 2.6E-16 T 13-09-2016 PMA3_RS26180 a98772e98bff8a504848396446d37496 136 SMART SM00448 13 123 4.3E-4 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 SMART SM00382 171 313 8.3E-6 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.1E-9 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 1.1E-9 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 Gene3D G3DSA:3.40.50.300 141 322 2.8E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 Gene3D G3DSA:1.10.8.60 325 392 3.0E-23 T 13-09-2016 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 SUPERFAMILY SSF52540 157 393 8.57E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 364 373 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.0E-11 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 Pfam PF00072 Response regulator receiver domain 5 112 2.0E-27 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 Gene3D G3DSA:1.10.10.60 411 468 6.4E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 237 252 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 Pfam PF00158 Sigma-54 interaction domain 156 317 3.6E-64 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 175 188 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 SUPERFAMILY SSF52172 3 193 1.42E-41 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 SUPERFAMILY SSF46689 364 468 8.06E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 Gene3D G3DSA:3.40.50.2300 3 127 2.6E-35 T 13-09-2016 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 SMART SM00448 3 114 8.4E-35 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS17520 4fad8ad7f4d4ba638d548b06f5fa6fcf 476 PANTHER PTHR32071 1 476 3.1E-173 T 13-09-2016 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PANTHER PTHR19370 36 288 1.2E-80 T 13-09-2016 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 325 333 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 SUPERFAMILY SSF54292 259 375 3.93E-29 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PANTHER PTHR19370:SF89 36 288 1.2E-80 T 13-09-2016 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 Gene3D G3DSA:3.10.20.30 263 374 1.7E-33 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 Gene3D G3DSA:3.40.50.80 123 262 3.5E-31 T 13-09-2016 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 Pfam PF00970 Oxidoreductase FAD-binding domain 45 132 2.2E-15 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 SUPERFAMILY SSF52343 125 266 4.19E-32 T 13-09-2016 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 SUPERFAMILY SSF63380 36 134 3.83E-27 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 Pfam PF00175 Oxidoreductase NAD-binding domain 145 249 2.7E-11 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PRINTS PR00406 Cytochrome B5 reductase signature 143 162 2.6E-8 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PRINTS PR00406 Cytochrome B5 reductase signature 180 191 2.6E-8 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PRINTS PR00406 Cytochrome B5 reductase signature 83 90 2.6E-8 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PRINTS PR00406 Cytochrome B5 reductase signature 236 244 2.6E-8 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PRINTS PR00406 Cytochrome B5 reductase signature 120 134 2.6E-8 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 Gene3D G3DSA:2.40.30.10 36 122 1.4E-26 T 13-09-2016 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 83 90 4.4E-7 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 143 162 4.4E-7 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 64 74 4.4E-7 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 180 191 4.4E-7 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS10040 fb2a4b913c50c0328d685307d38de64a 375 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 299 368 1.5E-11 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 Gene3D G3DSA:3.40.1390.20 211 348 1.9E-27 T 13-09-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 Pfam PF01515 Phosphate acetyl/butaryl transferase 374 689 4.7E-111 T 13-09-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 SUPERFAMILY SSF53659 374 693 1.06E-82 T 13-09-2016 PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 389 689 5.8E-114 T 13-09-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 SUPERFAMILY SSF75138 213 337 4.71E-24 T 13-09-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 Pfam PF13500 AAA domain 2 214 4.6E-35 T 13-09-2016 PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 Pfam PF07085 DRTGG domain 217 328 2.6E-29 T 13-09-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 SUPERFAMILY SSF52540 1 224 3.11E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 Gene3D G3DSA:3.40.50.300 1 210 2.2E-17 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 PANTHER PTHR23406:SF3 162 694 4.7E-47 T 13-09-2016 PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 PIRSF PIRSF006107 1 696 0.0 T 13-09-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 PANTHER PTHR23406 162 694 4.7E-47 T 13-09-2016 PMA3_RS24965 ff006e5418eb271859db9165d338921c 699 Gene3D G3DSA:3.40.50.10750 506 665 1.6E-59 T 13-09-2016 PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 SMART SM00267 117 289 4.2E-59 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 SMART SM00086 74 117 3.5E-7 T 13-09-2016 IPR001610 PAC motif PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 SMART SM00091 3 68 2.9E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 Pfam PF13426 PAS domain 14 116 2.5E-15 T 13-09-2016 IPR000014 PAS domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 SMART SM00052 299 545 2.3E-91 T 13-09-2016 IPR001633 EAL domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 Gene3D G3DSA:3.30.450.20 13 116 2.2E-27 T 13-09-2016 PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 SUPERFAMILY SSF55073 133 290 3.45E-50 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 PANTHER PTHR10799 86 400 1.0E-67 T 13-09-2016 PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 285 2.7E-45 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 120 5.5E-17 T 13-09-2016 IPR000014 PAS domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 Gene3D G3DSA:3.20.20.450 303 551 2.5E-85 T 13-09-2016 IPR001633 EAL domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 Pfam PF00563 EAL domain 305 540 8.6E-69 T 13-09-2016 IPR001633 EAL domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 SUPERFAMILY SSF55785 13 114 1.03E-28 T 13-09-2016 IPR000014 PAS domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 Gene3D G3DSA:3.30.70.270 130 290 4.6E-56 T 13-09-2016 PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 124 288 5.2E-41 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 SUPERFAMILY SSF141868 305 554 8.76E-78 T 13-09-2016 IPR001633 EAL domain PMA3_RS20300 7c7d7575e898013f73f8faa3b0aba72f 566 PANTHER PTHR10799:SF710 86 400 1.0E-67 T 13-09-2016 PMA3_RS17245 c78f25c0b2a8d90d3135ab242787ad3b 522 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 28 467 4.4E-34 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS17245 c78f25c0b2a8d90d3135ab242787ad3b 522 PIRSF PIRSF002744 3 493 8.4E-90 T 13-09-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PMA3_RS17245 c78f25c0b2a8d90d3135ab242787ad3b 522 PANTHER PTHR31806 13 493 2.9E-76 T 13-09-2016 PMA3_RS14765 d61bd9ae2a05c78154c338b45faa752b 312 PANTHER PTHR30349:SF5 23 311 1.1E-28 T 13-09-2016 PMA3_RS14765 d61bd9ae2a05c78154c338b45faa752b 312 SUPERFAMILY SSF56349 124 310 3.53E-37 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS14765 d61bd9ae2a05c78154c338b45faa752b 312 Gene3D G3DSA:1.10.443.10 131 307 7.8E-33 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS14765 d61bd9ae2a05c78154c338b45faa752b 312 Pfam PF00589 Phage integrase family 125 295 2.6E-23 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS14765 d61bd9ae2a05c78154c338b45faa752b 312 PANTHER PTHR30349 23 311 1.1E-28 T 13-09-2016 PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 19 559 2.0E-127 T 13-09-2016 IPR017731 Type VI secretion system, IcmF PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 Gene3D G3DSA:3.30.1330.60 706 827 2.0E-28 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 PANTHER PTHR36153 592 633 2.9E-94 T 13-09-2016 PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 PANTHER PTHR36153 1 561 2.9E-94 T 13-09-2016 PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 Gene3D G3DSA:3.40.50.300 129 265 1.2E-6 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 SUPERFAMILY SSF103088 707 827 1.7E-23 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 PANTHER PTHR36153:SF1 1 561 2.9E-94 T 13-09-2016 PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 PANTHER PTHR36153:SF1 592 633 2.9E-94 T 13-09-2016 PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 Pfam PF00691 OmpA family 716 810 1.5E-13 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 SUPERFAMILY SSF52540 128 277 4.83E-10 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 Pfam PF06761 Intracellular multiplication and human macrophage-killing 510 674 3.3E-13 T 13-09-2016 IPR009612 ImcF-related PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 Pfam PF14331 ImcF-related N-terminal domain 188 444 1.2E-70 T 13-09-2016 IPR025743 ImcF-related, N-terminal domain PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 PRINTS PR01021 OMPA domain signature 765 781 6.1E-7 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 PRINTS PR01021 OMPA domain signature 750 765 6.1E-7 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS11285 8ded96f4be0fb7f0023a667aa4c2b27a 831 PRINTS PR01021 OMPA domain signature 719 741 6.1E-7 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS23100 4edac706c0030932af546f2fbea98f40 419 Gene3D G3DSA:1.50.10.10 11 403 1.9E-88 T 13-09-2016 IPR012341 Six-hairpin glycosidase GO:0003824 PMA3_RS23100 4edac706c0030932af546f2fbea98f40 419 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 40 394 8.0E-119 T 13-09-2016 PMA3_RS23100 4edac706c0030932af546f2fbea98f40 419 SUPERFAMILY SSF48208 11 410 4.83E-111 T 13-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PMA3_RS23100 4edac706c0030932af546f2fbea98f40 419 PANTHER PTHR15108 7 413 2.5E-49 T 13-09-2016 PMA3_RS06270 5329136459b6cf44a89d8dd2d00b2a48 271 SUPERFAMILY SSF56752 4 262 1.7E-68 T 13-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS06270 5329136459b6cf44a89d8dd2d00b2a48 271 PANTHER PTHR11825:SF55 1 246 3.8E-67 T 13-09-2016 PMA3_RS06270 5329136459b6cf44a89d8dd2d00b2a48 271 Pfam PF01063 Amino-transferase class IV 25 246 2.4E-49 T 13-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS06270 5329136459b6cf44a89d8dd2d00b2a48 271 PANTHER PTHR11825 1 246 3.8E-67 T 13-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS06270 5329136459b6cf44a89d8dd2d00b2a48 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 4 263 2.0E-90 T 13-09-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 PMA3_RS06270 5329136459b6cf44a89d8dd2d00b2a48 271 Gene3D G3DSA:3.20.10.10 123 262 5.3E-41 T 13-09-2016 PMA3_RS06270 5329136459b6cf44a89d8dd2d00b2a48 271 Gene3D G3DSA:3.30.470.10 4 104 1.6E-27 T 13-09-2016 PMA3_RS03060 ab74e8cc217ea5b136d1f6b213ef3350 688 Pfam PF02554 Carbon starvation protein CstA 35 411 1.3E-167 T 13-09-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 PMA3_RS03060 ab74e8cc217ea5b136d1f6b213ef3350 688 PANTHER PTHR30252 9 688 0.0 T 13-09-2016 PMA3_RS03060 ab74e8cc217ea5b136d1f6b213ef3350 688 PANTHER PTHR30252:SF3 9 688 0.0 T 13-09-2016 PMA3_RS03060 ab74e8cc217ea5b136d1f6b213ef3350 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 466 594 9.2E-36 T 13-09-2016 IPR025299 CstA, C-terminal domain PMA3_RS08565 d9dc458c88745dc61a5d7d2d8c12be3e 469 PIRSF PIRSF006603 22 469 1.0E-70 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS08565 d9dc458c88745dc61a5d7d2d8c12be3e 469 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 427 5.9E-108 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS08565 d9dc458c88745dc61a5d7d2d8c12be3e 469 PANTHER PTHR11206:SF153 18 463 2.5E-211 T 13-09-2016 PMA3_RS08565 d9dc458c88745dc61a5d7d2d8c12be3e 469 Pfam PF01554 MatE 32 191 7.9E-38 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS08565 d9dc458c88745dc61a5d7d2d8c12be3e 469 Pfam PF01554 MatE 258 419 1.4E-36 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS08565 d9dc458c88745dc61a5d7d2d8c12be3e 469 PANTHER PTHR11206 18 463 2.5E-211 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 Gene3D G3DSA:3.30.70.1430 580 682 2.3E-30 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 SUPERFAMILY SSF82693 819 868 8.37E-26 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 SUPERFAMILY SSF82693 683 732 8.37E-26 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 SUPERFAMILY SSF82866 299 499 8.11E-52 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 Pfam PF00873 AcrB/AcrD/AcrF family 3 1039 0.0 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PANTHER PTHR32063 1 1051 0.0 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 Gene3D G3DSA:1.10.3850.10 825 1039 2.0E-60 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 Gene3D G3DSA:1.10.3850.10 285 500 3.5E-61 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 Gene3D G3DSA:3.30.70.1430 41 141 1.4E-30 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 SUPERFAMILY SSF82693 41 134 8.11E-25 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.9E-95 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 2.9E-95 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.9E-95 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.9E-95 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.9E-95 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.9E-95 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.9E-95 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 2.9E-95 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.9E-95 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 SUPERFAMILY SSF82714 733 818 2.09E-20 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 SUPERFAMILY SSF82866 842 1038 1.57E-47 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 SUPERFAMILY SSF82714 185 274 5.23E-20 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 Gene3D G3DSA:3.30.2090.10 184 277 3.4E-26 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 Gene3D G3DSA:3.30.2090.10 733 821 2.1E-23 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 PANTHER PTHR32063:SF11 1 1051 0.0 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1051 0.0 T 13-09-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 SUPERFAMILY SSF82693 576 682 1.78E-27 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 SUPERFAMILY SSF82693 138 184 3.66E-28 T 13-09-2016 PMA3_RS13475 c30ca8556530236524f4a393db0d0a54 1060 SUPERFAMILY SSF82693 277 333 3.66E-28 T 13-09-2016 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 PANTHER PTHR10357:SF166 22 130 1.4E-152 T 13-09-2016 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 PANTHER PTHR10357:SF166 731 931 1.4E-152 T 13-09-2016 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 PANTHER PTHR10357 266 426 1.4E-152 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 Pfam PF00128 Alpha amylase, catalytic domain 31 99 2.9E-11 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 Gene3D G3DSA:1.10.10.470 623 722 3.4E-25 T 13-09-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 Gene3D G3DSA:3.30.1590.10 102 185 8.1E-42 T 13-09-2016 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 Gene3D G3DSA:3.30.1590.10 260 298 8.1E-42 T 13-09-2016 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 Gene3D G3DSA:3.20.20.80 314 392 1.6E-70 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 Gene3D G3DSA:3.20.20.80 581 621 1.6E-70 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 Gene3D G3DSA:3.20.20.80 735 857 1.6E-70 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 Gene3D G3DSA:3.20.20.80 12 101 1.6E-70 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 PANTHER PTHR10357:SF166 266 426 1.4E-152 T 13-09-2016 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 Gene3D G3DSA:1.10.150.200 420 478 2.7E-5 T 13-09-2016 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 Gene3D G3DSA:1.10.150.200 521 545 2.7E-5 T 13-09-2016 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 10 925 1.3E-283 T 13-09-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 SUPERFAMILY SSF51445 10 182 9.79E-131 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 SUPERFAMILY SSF51445 531 826 9.79E-131 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 SUPERFAMILY SSF51445 259 494 9.79E-131 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 SMART SM00642 17 496 1.6E-4 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 PANTHER PTHR10357 22 130 1.4E-152 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14910 590c05895c42f3f6bf5e8c10c182faf0 931 PANTHER PTHR10357 731 931 1.4E-152 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS24945 d0128e1d73a3e169080049b50bb3f473 399 Gene3D G3DSA:3.40.50.2000 186 364 1.7E-22 T 13-09-2016 PMA3_RS24945 d0128e1d73a3e169080049b50bb3f473 399 PANTHER PTHR12526 15 385 6.8E-105 T 13-09-2016 PMA3_RS24945 d0128e1d73a3e169080049b50bb3f473 399 Pfam PF00534 Glycosyl transferases group 1 203 364 5.8E-24 T 13-09-2016 IPR001296 Glycosyl transferase, family 1 PMA3_RS24945 d0128e1d73a3e169080049b50bb3f473 399 SUPERFAMILY SSF53756 16 383 2.76E-73 T 13-09-2016 PMA3_RS24945 d0128e1d73a3e169080049b50bb3f473 399 Pfam PF13439 Glycosyltransferase Family 4 26 191 3.1E-25 T 13-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PMA3_RS24945 d0128e1d73a3e169080049b50bb3f473 399 PANTHER PTHR12526:SF363 15 385 6.8E-105 T 13-09-2016 PMA3_RS24945 d0128e1d73a3e169080049b50bb3f473 399 Gene3D G3DSA:3.40.50.2300 81 125 0.001 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 Gene3D G3DSA:1.10.8.260 269 319 1.8E-8 T 13-09-2016 IPR023166 HI0933 insert-like domain PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 SUPERFAMILY SSF51905 335 392 3.77E-56 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 SUPERFAMILY SSF51905 4 188 3.77E-56 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 PANTHER PTHR10617:SF103 328 392 1.7E-126 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 390 3.5E-129 T 13-09-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 SUPERFAMILY SSF160996 190 338 4.71E-38 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 PANTHER PTHR10617 2 285 1.7E-126 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 PANTHER PTHR10617 328 392 1.7E-126 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 360 367 2.2E-8 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 2.2E-8 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.2E-8 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 PANTHER PTHR10617:SF103 2 285 1.7E-126 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 345 367 3.1E-6 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 3.1E-6 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.1E-6 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 Pfam PF03486 HI0933-like protein 5 390 1.8E-151 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 Gene3D G3DSA:2.40.30.10 188 268 7.7E-29 T 13-09-2016 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 Gene3D G3DSA:3.50.50.60 4 186 5.3E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28155 32d76242a949f2635232a859cdd95312 392 Gene3D G3DSA:3.50.50.60 337 392 5.3E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14325 0d5c4cf07671aa2602faa361230fb570 301 PANTHER PTHR12128 1 286 2.0E-87 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS14325 0d5c4cf07671aa2602faa361230fb570 301 SMART SM01130 2 290 1.7E-82 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS14325 0d5c4cf07671aa2602faa361230fb570 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.9E-13 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS14325 0d5c4cf07671aa2602faa361230fb570 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.9E-13 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS14325 0d5c4cf07671aa2602faa361230fb570 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.9E-13 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS14325 0d5c4cf07671aa2602faa361230fb570 301 Gene3D G3DSA:3.20.20.70 1 289 2.9E-86 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS14325 0d5c4cf07671aa2602faa361230fb570 301 PANTHER PTHR12128:SF34 1 286 2.0E-87 T 13-09-2016 PMA3_RS14325 0d5c4cf07671aa2602faa361230fb570 301 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.3E-57 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS14325 0d5c4cf07671aa2602faa361230fb570 301 SUPERFAMILY SSF51569 1 289 2.09E-79 T 13-09-2016 PMA3_RS14325 0d5c4cf07671aa2602faa361230fb570 301 PIRSF PIRSF001365 1 297 1.8E-79 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Gene3D G3DSA:3.30.1370.10 553 623 4.3E-24 T 13-09-2016 IPR004088 K Homology domain, type 1 GO:0003723 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Pfam PF00575 S1 RNA binding domain 620 691 2.3E-16 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 SUPERFAMILY SSF54211 4 144 1.21E-47 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 SUPERFAMILY SSF55666 145 236 4.84E-27 T 13-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 PIRSF PIRSF005499 1 700 5.1E-287 T 13-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 1.0E-22 T 13-09-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Pfam PF00013 KH domain 559 613 6.0E-13 T 13-09-2016 IPR004088 K Homology domain, type 1 GO:0003723 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 PANTHER PTHR11252 2 693 0.0 T 13-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Pfam PF03725 3' exoribonuclease family, domain 2 147 211 1.9E-10 T 13-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 2.0E-5 T 13-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 SUPERFAMILY SSF50249 615 693 1.36E-21 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 SUPERFAMILY SSF54211 294 489 1.47E-50 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Gene3D G3DSA:1.10.10.400 241 313 2.1E-21 T 13-09-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Gene3D G3DSA:3.30.230.70 314 543 1.4E-90 T 13-09-2016 IPR027408 PNPase/RNase PH domain PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Gene3D G3DSA:3.30.230.70 3 226 7.5E-80 T 13-09-2016 IPR027408 PNPase/RNase PH domain PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 SUPERFAMILY SSF54791 556 641 6.42E-24 T 13-09-2016 IPR004088 K Homology domain, type 1 GO:0003723 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 692 0.0 T 13-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 SUPERFAMILY SSF55666 451 550 2.38E-28 T 13-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.131 T 13-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 3.8E-20 T 13-09-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 4.8E-23 T 13-09-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 Gene3D G3DSA:2.40.50.140 624 693 5.4E-24 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 PANTHER PTHR11252:SF0 2 693 0.0 T 13-09-2016 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 SMART SM00316 621 691 6.9E-24 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS25470 03deee318f3b706a26e32d1e1ee4cc7c 701 SMART SM00322 553 618 1.7E-13 T 13-09-2016 IPR004087 K Homology domain GO:0003676 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 384 403 - T 13-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 PANTHER PTHR32248:SF4 1 497 4.7E-175 T 13-09-2016 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 Pfam PF04963 Sigma-54 factor, core binding domain 130 323 9.6E-63 T 13-09-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 PRINTS PR00045 Sigma-54 factor signature 412 423 6.2E-32 T 13-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 PRINTS PR00045 Sigma-54 factor signature 396 408 6.2E-32 T 13-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 PRINTS PR00045 Sigma-54 factor signature 470 488 6.2E-32 T 13-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 PRINTS PR00045 Sigma-54 factor signature 206 223 6.2E-32 T 13-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 475 482 - T 13-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 PANTHER PTHR32248 1 497 4.7E-175 T 13-09-2016 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 4.5E-17 T 13-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 Pfam PF04552 Sigma-54, DNA binding domain 337 495 3.4E-71 T 13-09-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 PIRSF PIRSF000774 1 497 6.3E-154 T 13-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS25105 428dfb7850ddab6a855d7d6388b3bc70 497 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 494 1.3E-154 T 13-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 Gene3D G3DSA:1.10.1740.10 311 392 1.5E-28 T 13-09-2016 PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 SUPERFAMILY SSF69055 300 393 1.31E-29 T 13-09-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 SUPERFAMILY SSF51735 4 153 5.5E-44 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 PANTHER PTHR30525 2 394 4.6E-210 T 13-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 PIRSF PIRSF006205 4 396 2.2E-146 T 13-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 390 46.132 T 13-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 Gene3D G3DSA:3.40.50.720 3 153 1.7E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 SUPERFAMILY SSF55347 129 272 1.9E-60 T 13-09-2016 PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 269 384 2.2E-41 T 13-09-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 387 1.1E-150 T 13-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 149 237 1.6E-37 T 13-09-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04855 4ce04e4e8ac249810df8c55e2e46d9e5 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 135 5.3E-44 T 13-09-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS21530 38bd94a69e5d44d221ffdb7a3e292e1b 109 Gene3D G3DSA:3.40.1690.10 9 84 3.6E-23 T 13-09-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PMA3_RS21530 38bd94a69e5d44d221ffdb7a3e292e1b 109 PANTHER PTHR30531 5 94 4.3E-34 T 13-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PMA3_RS21530 38bd94a69e5d44d221ffdb7a3e292e1b 109 Pfam PF01312 FlhB HrpN YscU SpaS Family 10 79 2.6E-18 T 13-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PMA3_RS21530 38bd94a69e5d44d221ffdb7a3e292e1b 109 SUPERFAMILY SSF160544 8 84 4.32E-21 T 13-09-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 Pfam PF08676 MutL C terminal dimerisation domain 443 590 7.5E-50 T 13-09-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 PANTHER PTHR10073 11 630 9.1E-173 T 13-09-2016 PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 221 337 3.2E-39 T 13-09-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 9 630 29.808 T 13-09-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 101 107 - T 13-09-2016 IPR014762 DNA mismatch repair, conserved site PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 132 7.9E-11 T 13-09-2016 PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 SMART SM01340 220 338 5.6E-62 T 13-09-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 SUPERFAMILY SSF55874 9 209 2.36E-54 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 Gene3D G3DSA:3.30.230.10 227 337 4.7E-39 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 SMART SM00853 447 590 3.9E-55 T 13-09-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 SUPERFAMILY SSF54211 199 338 4.93E-40 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 SUPERFAMILY SSF118116 443 632 1.96E-60 T 13-09-2016 PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 Gene3D G3DSA:3.30.565.10 10 219 1.4E-75 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02050 c88d7e506fdd08f61b8875af0d5d1e26 634 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 10 318 3.4E-102 T 13-09-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 PMA3_RS28895 04688b4b6b841d7599071ea7dbf280a3 452 SMART SM01230 114 370 8.2E-111 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS28895 04688b4b6b841d7599071ea7dbf280a3 452 SUPERFAMILY SSF55931 114 449 4.61E-106 T 13-09-2016 PMA3_RS28895 04688b4b6b841d7599071ea7dbf280a3 452 PANTHER PTHR20852 1 452 0.0 T 13-09-2016 PMA3_RS28895 04688b4b6b841d7599071ea7dbf280a3 452 Pfam PF00120 Glutamine synthetase, catalytic domain 115 446 1.3E-108 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS28895 04688b4b6b841d7599071ea7dbf280a3 452 PANTHER PTHR20852:SF63 1 452 0.0 T 13-09-2016 PMA3_RS28895 04688b4b6b841d7599071ea7dbf280a3 452 Gene3D G3DSA:3.10.20.70 6 117 2.6E-16 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS28895 04688b4b6b841d7599071ea7dbf280a3 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 250 265 - T 13-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS28895 04688b4b6b841d7599071ea7dbf280a3 452 SUPERFAMILY SSF54368 5 113 5.75E-19 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS28895 04688b4b6b841d7599071ea7dbf280a3 452 Gene3D G3DSA:3.30.590.10 118 438 2.3E-93 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS29925 64cffc768e8faacf9f992b83b480665a 395 PANTHER PTHR10108 309 394 1.4E-125 T 13-09-2016 PMA3_RS29925 64cffc768e8faacf9f992b83b480665a 395 Pfam PF02353 Mycolic acid cyclopropane synthetase 98 372 8.3E-107 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS29925 64cffc768e8faacf9f992b83b480665a 395 PANTHER PTHR10108:SF743 31 292 1.4E-125 T 13-09-2016 PMA3_RS29925 64cffc768e8faacf9f992b83b480665a 395 SUPERFAMILY SSF53335 109 376 3.98E-83 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS29925 64cffc768e8faacf9f992b83b480665a 395 PANTHER PTHR10108:SF743 309 394 1.4E-125 T 13-09-2016 PMA3_RS29925 64cffc768e8faacf9f992b83b480665a 395 PIRSF PIRSF003085 1 394 3.4E-132 T 13-09-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 PMA3_RS29925 64cffc768e8faacf9f992b83b480665a 395 Gene3D G3DSA:3.40.50.150 100 375 4.1E-98 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS29925 64cffc768e8faacf9f992b83b480665a 395 PANTHER PTHR10108 31 292 1.4E-125 T 13-09-2016 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 Gene3D G3DSA:3.40.50.170 92 283 6.9E-52 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 287 2.0E-97 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 PANTHER PTHR10520 4 281 2.8E-137 T 13-09-2016 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 287 45.748 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 Gene3D G3DSA:3.30.70.260 4 87 1.3E-19 T 13-09-2016 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 SUPERFAMILY SSF55021 6 88 4.93E-15 T 13-09-2016 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 Pfam PF00551 Formyl transferase 92 269 3.1E-33 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 SUPERFAMILY SSF53328 92 287 3.92E-58 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 3.9E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 3.9E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 3.9E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 93 115 3.9E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 115 142 3.9E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 3.9E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 PIRSF PIRSF036480 5 288 8.3E-107 T 13-09-2016 PMA3_RS11085 d71443901bae3491e901103362aa2436 288 PANTHER PTHR10520:SF7 4 281 2.8E-137 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS30215 a2f34e61360ffa6dcf0bf9c8a4b68947 306 PANTHER PTHR30177:SF6 26 282 6.3E-87 T 13-09-2016 PMA3_RS30215 a2f34e61360ffa6dcf0bf9c8a4b68947 306 Gene3D G3DSA:3.40.190.100 114 230 1.1E-23 T 13-09-2016 PMA3_RS30215 a2f34e61360ffa6dcf0bf9c8a4b68947 306 PANTHER PTHR30177 26 282 6.3E-87 T 13-09-2016 PMA3_RS30215 a2f34e61360ffa6dcf0bf9c8a4b68947 306 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 28 277 5.8E-58 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS30215 a2f34e61360ffa6dcf0bf9c8a4b68947 306 SUPERFAMILY SSF53850 22 294 5.7E-83 T 13-09-2016 PMA3_RS30215 a2f34e61360ffa6dcf0bf9c8a4b68947 306 Gene3D G3DSA:3.40.190.10 231 294 6.6E-42 T 13-09-2016 PMA3_RS30215 a2f34e61360ffa6dcf0bf9c8a4b68947 306 Gene3D G3DSA:3.40.190.10 24 109 6.6E-42 T 13-09-2016 PMA3_RS30215 a2f34e61360ffa6dcf0bf9c8a4b68947 306 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 23 306 4.7E-132 T 13-09-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 PMA3_RS21965 43187675d1afae263b2da7d6b13b25b6 297 Pfam PF00892 EamA-like transporter family 148 279 1.3E-19 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS21965 43187675d1afae263b2da7d6b13b25b6 297 Pfam PF00892 EamA-like transporter family 12 136 5.4E-12 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS21965 43187675d1afae263b2da7d6b13b25b6 297 SUPERFAMILY SSF103481 40 137 2.22E-10 T 13-09-2016 PMA3_RS21965 43187675d1afae263b2da7d6b13b25b6 297 SUPERFAMILY SSF103481 186 281 8.37E-17 T 13-09-2016 PMA3_RS21965 43187675d1afae263b2da7d6b13b25b6 297 PANTHER PTHR22911:SF23 1 282 8.8E-47 T 13-09-2016 PMA3_RS21965 43187675d1afae263b2da7d6b13b25b6 297 PANTHER PTHR22911 1 282 8.8E-47 T 13-09-2016 PMA3_RS01420 7144d2f642fb31c582306052d392ee97 284 Gene3D G3DSA:3.40.50.1820 2 268 1.8E-55 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01420 7144d2f642fb31c582306052d392ee97 284 SUPERFAMILY SSF53474 5 267 7.43E-56 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01420 7144d2f642fb31c582306052d392ee97 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 8.0E-17 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01420 7144d2f642fb31c582306052d392ee97 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 8.0E-17 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01420 7144d2f642fb31c582306052d392ee97 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 8.0E-17 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01420 7144d2f642fb31c582306052d392ee97 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 8.0E-17 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01420 7144d2f642fb31c582306052d392ee97 284 TIGRFAM TIGR02240 PHA_depoly_arom: poly(3-hydroxyalkanoate) depolymerase 5 279 7.6E-184 T 13-09-2016 IPR011942 Poly(3-hydroxyalkanoate) depolymerase KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- PMA3_RS01420 7144d2f642fb31c582306052d392ee97 284 Pfam PF00561 alpha/beta hydrolase fold 30 253 1.6E-28 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01420 7144d2f642fb31c582306052d392ee97 284 PANTHER PTHR10992 8 268 5.5E-40 T 13-09-2016 PMA3_RS27725 e87b94b4740f22c108d5e06d0f738473 91 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 9 89 7.6E-35 T 13-09-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 PMA3_RS27725 e87b94b4740f22c108d5e06d0f738473 91 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 3 90 25.164 T 13-09-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 PMA3_RS27725 e87b94b4740f22c108d5e06d0f738473 91 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 25 88 6.9E-14 T 13-09-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 PMA3_RS11625 ad64122337a008749db342035608b7eb 342 Gene3D G3DSA:3.10.129.10 36 168 3.9E-14 T 13-09-2016 IPR029069 HotDog domain PMA3_RS11625 ad64122337a008749db342035608b7eb 342 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 265 326 7.3E-17 T 13-09-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal PMA3_RS11625 ad64122337a008749db342035608b7eb 342 Pfam PF13452 N-terminal half of MaoC dehydratase 33 167 6.4E-12 T 13-09-2016 PMA3_RS11625 ad64122337a008749db342035608b7eb 342 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 226 262 8.8E-12 T 13-09-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal PMA3_RS11625 ad64122337a008749db342035608b7eb 342 PANTHER PTHR13078:SF52 123 330 3.0E-37 T 13-09-2016 PMA3_RS11625 ad64122337a008749db342035608b7eb 342 SUPERFAMILY SSF54637 34 202 4.52E-15 T 13-09-2016 IPR029069 HotDog domain PMA3_RS11625 ad64122337a008749db342035608b7eb 342 SUPERFAMILY SSF50249 212 334 6.0E-31 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS11625 ad64122337a008749db342035608b7eb 342 PANTHER PTHR13078 123 330 3.0E-37 T 13-09-2016 PMA3_RS11625 ad64122337a008749db342035608b7eb 342 PANTHER PTHR13078 29 102 3.0E-37 T 13-09-2016 PMA3_RS11625 ad64122337a008749db342035608b7eb 342 PANTHER PTHR13078:SF52 29 102 3.0E-37 T 13-09-2016 PMA3_RS22625 470f0ae08f54871fab99f4d5ff5f7193 262 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS22625 470f0ae08f54871fab99f4d5ff5f7193 262 Gene3D G3DSA:3.40.50.300 3 216 2.3E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22625 470f0ae08f54871fab99f4d5ff5f7193 262 Pfam PF00005 ABC transporter 19 168 1.5E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS22625 470f0ae08f54871fab99f4d5ff5f7193 262 PANTHER PTHR24220 5 216 3.2E-81 T 13-09-2016 PMA3_RS22625 470f0ae08f54871fab99f4d5ff5f7193 262 SUPERFAMILY SSF52540 3 216 8.38E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22625 470f0ae08f54871fab99f4d5ff5f7193 262 SMART SM00382 28 218 8.1E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS07825 69f546009b14e3bc463d767f82b51441 308 SUPERFAMILY SSF88713 4 304 1.56E-99 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS07825 69f546009b14e3bc463d767f82b51441 308 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 5 303 1.9E-165 T 13-09-2016 IPR017625 Putative urate catabolism protein PMA3_RS07825 69f546009b14e3bc463d767f82b51441 308 Gene3D G3DSA:3.20.20.370 4 304 7.7E-118 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS07825 69f546009b14e3bc463d767f82b51441 308 PANTHER PTHR10587 10 301 1.0E-171 T 13-09-2016 PMA3_RS07825 69f546009b14e3bc463d767f82b51441 308 PANTHER PTHR10587:SF72 10 301 1.0E-171 T 13-09-2016 PMA3_RS07825 69f546009b14e3bc463d767f82b51441 308 Pfam PF01522 Polysaccharide deacetylase 76 164 1.8E-18 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS09400 65ed5b6ef0f5e768c57c6d68499e0087 116 SUPERFAMILY SSF46785 21 103 4.69E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09400 65ed5b6ef0f5e768c57c6d68499e0087 116 Gene3D G3DSA:1.10.10.10 22 104 1.1E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09400 65ed5b6ef0f5e768c57c6d68499e0087 116 SMART SM00418 22 101 6.2E-14 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS09400 65ed5b6ef0f5e768c57c6d68499e0087 116 Pfam PF12840 Helix-turn-helix domain 23 81 1.4E-9 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09400 65ed5b6ef0f5e768c57c6d68499e0087 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 1.3E-8 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS09400 65ed5b6ef0f5e768c57c6d68499e0087 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 1.3E-8 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS09400 65ed5b6ef0f5e768c57c6d68499e0087 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.3E-8 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS09400 65ed5b6ef0f5e768c57c6d68499e0087 116 PANTHER PTHR33154 8 113 1.1E-17 T 13-09-2016 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 Pfam PF02954 Bacterial regulatory protein, Fis family 478 508 5.4E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 SUPERFAMILY SSF55781 25 170 3.05E-16 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 Gene3D G3DSA:1.10.10.60 416 516 8.5E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 Gene3D G3DSA:3.30.450.40 6 174 1.3E-18 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 PANTHER PTHR32071:SF35 139 515 3.5E-187 T 13-09-2016 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 Pfam PF01590 GAF domain 27 159 1.0E-8 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 479 496 7.4E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 496 516 7.4E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 Gene3D G3DSA:3.40.50.300 192 363 2.2E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 SMART SM00065 22 170 1.4E-10 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 SUPERFAMILY SSF52540 193 429 2.07E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 Pfam PF00158 Sigma-54 interaction domain 194 360 1.9E-68 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 Gene3D G3DSA:1.10.8.60 366 415 7.1E-17 T 13-09-2016 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 SUPERFAMILY SSF46689 462 515 4.93E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 SMART SM00382 214 357 5.0E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS04235 7a3a9f6c18ddf987dd959188c6e09c5b 516 PANTHER PTHR32071 139 515 3.5E-187 T 13-09-2016 PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 PANTHER PTHR11544:SF63 1 69 1.2E-36 T 13-09-2016 PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 PRINTS PR00050 Cold shock protein signature 27 36 2.6E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 PRINTS PR00050 Cold shock protein signature 7 22 2.6E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 PRINTS PR00050 Cold shock protein signature 42 60 2.6E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 13-09-2016 IPR019844 Cold-shock conserved site PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 4.1E-29 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 SMART SM00357 6 69 5.4E-26 T 13-09-2016 IPR011129 Cold shock protein GO:0003676 PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 PANTHER PTHR11544 1 69 1.2E-36 T 13-09-2016 PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 SUPERFAMILY SSF50249 3 68 3.92E-24 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 PIRSF PIRSF002599 1 69 6.5E-23 T 13-09-2016 IPR012156 Cold shock, CspA GO:0003676 PMA3_RS05135 593faf041ac374e8fa84d8b264db2539 69 Gene3D G3DSA:2.40.50.140 5 68 2.1E-30 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS16810 bccbd9a20308009bed1f18e3cc587e59 295 PANTHER PTHR30126:SF20 1 292 2.6E-105 T 13-09-2016 PMA3_RS16810 bccbd9a20308009bed1f18e3cc587e59 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16810 bccbd9a20308009bed1f18e3cc587e59 295 Gene3D G3DSA:1.10.10.10 1 84 9.7E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16810 bccbd9a20308009bed1f18e3cc587e59 295 PANTHER PTHR30126 1 292 2.6E-105 T 13-09-2016 PMA3_RS16810 bccbd9a20308009bed1f18e3cc587e59 295 SUPERFAMILY SSF46785 1 110 1.45E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16810 bccbd9a20308009bed1f18e3cc587e59 295 Gene3D G3DSA:3.40.190.10 194 255 2.7E-12 T 13-09-2016 PMA3_RS16810 bccbd9a20308009bed1f18e3cc587e59 295 Pfam PF03466 LysR substrate binding domain 86 288 1.0E-38 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS16810 bccbd9a20308009bed1f18e3cc587e59 295 Gene3D G3DSA:3.40.190.10 85 193 2.8E-22 T 13-09-2016 PMA3_RS16810 bccbd9a20308009bed1f18e3cc587e59 295 SUPERFAMILY SSF53850 85 292 5.07E-36 T 13-09-2016 PMA3_RS10665 1959349580c411441629b1e997f6bece 189 PANTHER PTHR34406:SF1 9 189 8.9E-31 T 13-09-2016 PMA3_RS10665 1959349580c411441629b1e997f6bece 189 PANTHER PTHR34406 9 189 8.9E-31 T 13-09-2016 PMA3_RS10665 1959349580c411441629b1e997f6bece 189 Pfam PF04264 YceI-like domain 31 185 5.1E-33 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS10665 1959349580c411441629b1e997f6bece 189 SUPERFAMILY SSF101874 30 188 1.44E-39 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS10665 1959349580c411441629b1e997f6bece 189 SMART SM00867 27 187 1.7E-40 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS10665 1959349580c411441629b1e997f6bece 189 Gene3D G3DSA:2.40.128.110 30 188 4.7E-40 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS19365 38da804279c66c73678849961de289b7 237 Gene3D G3DSA:1.20.120.530 87 210 2.8E-12 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS19365 38da804279c66c73678849961de289b7 237 SUPERFAMILY SSF46785 8 70 2.12E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19365 38da804279c66c73678849961de289b7 237 SMART SM00345 8 66 5.3E-11 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS19365 38da804279c66c73678849961de289b7 237 SUPERFAMILY SSF48008 87 210 7.06E-14 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS19365 38da804279c66c73678849961de289b7 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 66 1.0E-12 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS19365 38da804279c66c73678849961de289b7 237 SMART SM00895 76 205 1.1E-8 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS19365 38da804279c66c73678849961de289b7 237 Pfam PF07729 FCD domain 86 204 1.8E-16 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS19365 38da804279c66c73678849961de289b7 237 Gene3D G3DSA:1.10.10.10 8 66 3.3E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19365 38da804279c66c73678849961de289b7 237 PANTHER PTHR11751 9 92 1.4E-17 T 13-09-2016 PMA3_RS19365 38da804279c66c73678849961de289b7 237 PANTHER PTHR11751:SF362 9 92 1.4E-17 T 13-09-2016 PMA3_RS21320 84cd740624ea7007b125629f9b65da54 432 PANTHER PTHR30035 3 431 2.9E-221 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS21320 84cd740624ea7007b125629f9b65da54 432 Gene3D G3DSA:3.40.50.1820 84 221 1.3E-10 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS21320 84cd740624ea7007b125629f9b65da54 432 Gene3D G3DSA:3.40.50.1820 370 430 1.3E-10 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS21320 84cd740624ea7007b125629f9b65da54 432 PANTHER PTHR30035:SF1 3 431 2.9E-221 T 13-09-2016 PMA3_RS21320 84cd740624ea7007b125629f9b65da54 432 SUPERFAMILY SSF53474 94 390 4.97E-20 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS24995 07cea07009769bea5633549d6b937045 472 Pfam PF13437 HlyD family secretion protein 324 438 3.0E-20 T 13-09-2016 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PANTHER PTHR30386:SF8 183 472 4.4E-96 T 13-09-2016 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PANTHER PTHR30386:SF8 23 147 4.4E-96 T 13-09-2016 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PANTHER PTHR30386 183 472 4.4E-96 T 13-09-2016 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 Gene3D G3DSA:2.40.50.100 96 126 9.8E-14 T 13-09-2016 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 Gene3D G3DSA:2.40.50.100 321 356 9.8E-14 T 13-09-2016 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 53 472 1.7E-119 T 13-09-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PANTHER PTHR30386 23 147 4.4E-96 T 13-09-2016 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 436 451 3.1E-58 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 393 416 3.1E-58 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 336 357 3.1E-58 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 62 85 3.1E-58 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 451 471 3.1E-58 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 369 393 3.1E-58 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS24995 07cea07009769bea5633549d6b937045 472 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 104 124 3.1E-58 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS27875 6240a9d5b855e12e5a7a3b36660ac60c 209 SUPERFAMILY SSF47616 78 208 5.89E-18 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS27875 6240a9d5b855e12e5a7a3b36660ac60c 209 Gene3D G3DSA:1.20.1050.10 98 208 1.8E-10 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS27875 6240a9d5b855e12e5a7a3b36660ac60c 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 87 2.9E-16 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS27875 6240a9d5b855e12e5a7a3b36660ac60c 209 PANTHER PTHR11260:SF256 5 207 2.3E-60 T 13-09-2016 PMA3_RS27875 6240a9d5b855e12e5a7a3b36660ac60c 209 PANTHER PTHR11260 5 207 2.3E-60 T 13-09-2016 PMA3_RS27875 6240a9d5b855e12e5a7a3b36660ac60c 209 Gene3D G3DSA:3.40.30.10 2 97 1.1E-19 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS27875 6240a9d5b855e12e5a7a3b36660ac60c 209 Pfam PF13410 Glutathione S-transferase, C-terminal domain 131 193 6.6E-8 T 13-09-2016 PMA3_RS27875 6240a9d5b855e12e5a7a3b36660ac60c 209 SUPERFAMILY SSF52833 5 109 2.07E-16 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 Gene3D G3DSA:3.40.190.10 89 171 2.2E-17 T 13-09-2016 PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 Gene3D G3DSA:3.40.190.10 172 255 1.3E-21 T 13-09-2016 PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 5 281 3.9E-128 T 13-09-2016 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 Pfam PF03466 LysR substrate binding domain 86 284 8.5E-41 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 SUPERFAMILY SSF46785 6 107 5.38E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 SUPERFAMILY SSF53850 87 285 5.44E-38 T 13-09-2016 PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 Gene3D G3DSA:1.10.10.10 5 78 4.6E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.9E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.9E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.9E-8 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 PANTHER PTHR30126 1 276 6.9E-63 T 13-09-2016 PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 PANTHER PTHR30126:SF11 1 276 6.9E-63 T 13-09-2016 PMA3_RS28725 278332a5aa194e2a5e75bd1de9ee733f 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 3.6E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS22275 afae58712b4d2a04c1c4cf5e2de647a4 281 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 173 5.8E-14 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS22275 afae58712b4d2a04c1c4cf5e2de647a4 281 SUPERFAMILY SSF52540 9 250 9.29E-36 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22275 afae58712b4d2a04c1c4cf5e2de647a4 281 Gene3D G3DSA:3.40.50.300 10 201 2.1E-33 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22275 afae58712b4d2a04c1c4cf5e2de647a4 281 PANTHER PTHR22908 1 235 5.9E-75 T 13-09-2016 PMA3_RS22275 afae58712b4d2a04c1c4cf5e2de647a4 281 SMART SM00382 25 184 8.8E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS12270 6de4698f7b33afbe0cb270e09f0cabf3 353 PANTHER PTHR13748 1 351 5.0E-149 T 13-09-2016 PMA3_RS12270 6de4698f7b33afbe0cb270e09f0cabf3 353 Gene3D G3DSA:3.40.50.300 6 231 3.5E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12270 6de4698f7b33afbe0cb270e09f0cabf3 353 SMART SM00833 260 351 5.3E-8 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS12270 6de4698f7b33afbe0cb270e09f0cabf3 353 Gene3D G3DSA:3.30.1220.10 242 351 1.5E-30 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS12270 6de4698f7b33afbe0cb270e09f0cabf3 353 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 5 347 7.8E-161 T 13-09-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 PMA3_RS12270 6de4698f7b33afbe0cb270e09f0cabf3 353 SUPERFAMILY SSF90002 270 351 1.7E-19 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS12270 6de4698f7b33afbe0cb270e09f0cabf3 353 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 215 2.6E-59 T 13-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS12270 6de4698f7b33afbe0cb270e09f0cabf3 353 SUPERFAMILY SSF52540 6 250 4.36E-35 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12270 6de4698f7b33afbe0cb270e09f0cabf3 353 PANTHER PTHR13748:SF10 1 351 5.0E-149 T 13-09-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 PMA3_RS12270 6de4698f7b33afbe0cb270e09f0cabf3 353 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 271 351 2.1E-17 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 Pfam PF07724 AAA domain (Cdc48 subfamily) 608 772 3.3E-38 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 Gene3D G3DSA:3.40.50.300 563 789 5.3E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 SUPERFAMILY SSF81923 12 127 1.49E-18 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 Gene3D G3DSA:1.10.8.60 378 460 2.4E-29 T 13-09-2016 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 326 338 - T 13-09-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 Gene3D G3DSA:3.40.50.300 193 374 3.0E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 235 347 1.1E-9 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 PANTHER PTHR11638 1 127 0.0 T 13-09-2016 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 PANTHER PTHR11638 146 887 0.0 T 13-09-2016 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 SMART SM00382 608 769 2.5E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 SMART SM00382 230 375 1.3E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 PANTHER PTHR11638:SF11 146 887 0.0 T 13-09-2016 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 779 853 1.3E-12 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 SUPERFAMILY SSF52540 193 525 1.16E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 862 0.0 T 13-09-2016 IPR017729 Type VI secretion system, ATPase ClpV1 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 SUPERFAMILY SSF52540 557 850 1.21E-58 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 Gene3D G3DSA:1.10.8.60 790 857 1.3E-10 T 13-09-2016 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 Gene3D G3DSA:1.10.1780.10 11 125 2.8E-14 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 SMART SM01086 779 874 8.1E-11 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 66 4.2E-6 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 PANTHER PTHR11638:SF11 1 127 0.0 T 13-09-2016 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 719 733 1.5E-31 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 675 1.5E-31 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 612 630 1.5E-31 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS10570 588627473e0476ee0a4f62af1695167b 888 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 686 704 1.5E-31 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS28630 9865485db812ab7852d70426df5fe733 83 SUPERFAMILY SSF54862 4 77 9.34E-20 T 13-09-2016 PMA3_RS28630 9865485db812ab7852d70426df5fe733 83 Pfam PF00037 4Fe-4S binding domain 4 25 2.0E-5 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS28630 9865485db812ab7852d70426df5fe733 83 Gene3D G3DSA:3.30.70.20 4 76 5.5E-19 T 13-09-2016 PMA3_RS28630 9865485db812ab7852d70426df5fe733 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS28630 9865485db812ab7852d70426df5fe733 83 PANTHER PTHR24960 1 77 1.7E-28 T 13-09-2016 PMA3_RS28630 9865485db812ab7852d70426df5fe733 83 PANTHER PTHR24960:SF38 1 77 1.7E-28 T 13-09-2016 PMA3_RS01800 42befacd200a231f605b9487256ed54b 244 Gene3D G3DSA:1.10.510.10 135 180 9.4E-7 T 13-09-2016 PMA3_RS01800 42befacd200a231f605b9487256ed54b 244 SUPERFAMILY SSF56112 35 196 3.78E-16 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS01800 42befacd200a231f605b9487256ed54b 244 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 37 180 3.2E-18 T 13-09-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PMA3_RS19575 71324f75549812821a68069c68b4b7c7 802 SMART SM00843 734 799 2.7E-36 T 13-09-2016 IPR018541 FtsK gamma domain PMA3_RS19575 71324f75549812821a68069c68b4b7c7 802 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 23 194 3.2E-39 T 13-09-2016 IPR025199 DNA translocase FtsK, 4TM region PMA3_RS19575 71324f75549812821a68069c68b4b7c7 802 SUPERFAMILY SSF46785 734 797 2.4E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19575 71324f75549812821a68069c68b4b7c7 802 Gene3D G3DSA:3.40.50.300 390 695 3.2E-96 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19575 71324f75549812821a68069c68b4b7c7 802 PANTHER PTHR22683 206 797 2.2E-265 T 13-09-2016 PMA3_RS19575 71324f75549812821a68069c68b4b7c7 802 SUPERFAMILY SSF52540 389 701 1.99E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19575 71324f75549812821a68069c68b4b7c7 802 PANTHER PTHR22683:SF41 206 797 2.2E-265 T 13-09-2016 PMA3_RS19575 71324f75549812821a68069c68b4b7c7 802 Pfam PF09397 Ftsk gamma domain 736 796 6.4E-26 T 13-09-2016 IPR018541 FtsK gamma domain PMA3_RS19575 71324f75549812821a68069c68b4b7c7 802 Pfam PF01580 FtsK/SpoIIIE family 418 628 2.9E-64 T 13-09-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 PMA3_RS24080 21e127c787e5ccafc8ea962d2824d872 211 Pfam PF07947 YhhN-like protein 27 204 7.7E-45 T 13-09-2016 IPR012506 YhhN-like GO:0016021 PMA3_RS24080 21e127c787e5ccafc8ea962d2824d872 211 PANTHER PTHR31885 23 206 1.0E-41 T 13-09-2016 PMA3_RS04610 8ea662df0687b77d2e64478d370fbfc9 293 SUPERFAMILY SSF75620 5 289 5.1E-118 T 13-09-2016 PMA3_RS04610 8ea662df0687b77d2e64478d370fbfc9 293 SMART SM00937 13 123 2.6E-51 T 13-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PMA3_RS04610 8ea662df0687b77d2e64478d370fbfc9 293 Pfam PF03462 PCRF domain 7 148 1.0E-44 T 13-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PMA3_RS04610 8ea662df0687b77d2e64478d370fbfc9 293 PANTHER PTHR11075 1 291 1.1E-140 T 13-09-2016 PMA3_RS04610 8ea662df0687b77d2e64478d370fbfc9 293 Gene3D G3DSA:3.30.160.20 156 233 1.6E-37 T 13-09-2016 IPR014720 Double-stranded RNA-binding domain PMA3_RS04610 8ea662df0687b77d2e64478d370fbfc9 293 Gene3D G3DSA:1.20.58.410 2 44 6.7E-5 T 13-09-2016 PMA3_RS04610 8ea662df0687b77d2e64478d370fbfc9 293 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 13-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PMA3_RS04610 8ea662df0687b77d2e64478d370fbfc9 293 PANTHER PTHR11075:SF6 1 291 1.1E-140 T 13-09-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PMA3_RS04610 8ea662df0687b77d2e64478d370fbfc9 293 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 291 5.8E-137 T 13-09-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PMA3_RS04610 8ea662df0687b77d2e64478d370fbfc9 293 Pfam PF00472 RF-1 domain 157 265 3.8E-39 T 13-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 143 236 1.1E-17 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 SUPERFAMILY SSF47203 363 513 2.09E-27 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 Gene3D G3DSA:1.10.540.10 99 236 2.6E-31 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 Pfam PF09317 Domain of unknown function (DUF1974) 517 802 7.8E-103 T 13-09-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 Gene3D G3DSA:2.40.110.10 240 352 5.5E-16 T 13-09-2016 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 Gene3D G3DSA:1.20.140.10 353 509 4.4E-27 T 13-09-2016 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 PANTHER PTHR10909:SF283 53 536 3.7E-235 T 13-09-2016 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 SUPERFAMILY SSF56645 121 358 2.36E-45 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 240 338 1.0E-8 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 363 508 3.2E-13 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS06120 05407fb4913520ea920b04dc9ce4a100 815 PANTHER PTHR10909 53 536 3.7E-235 T 13-09-2016 PMA3_RS27925 76601f6550ab86a708dcf5106b0b426b 66 Gene3D G3DSA:3.40.50.720 3 43 4.7E-6 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27925 76601f6550ab86a708dcf5106b0b426b 66 SUPERFAMILY SSF51735 3 52 9.05E-7 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 Gene3D G3DSA:3.10.350.10 362 404 2.1E-15 T 13-09-2016 IPR018392 LysM domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 Gene3D G3DSA:3.10.350.10 428 471 1.1E-14 T 13-09-2016 IPR018392 LysM domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 Pfam PF06474 MltD lipid attachment motif 1 32 3.2E-9 T 13-09-2016 IPR010511 Lytic murein transglycosylase D , lipid attachment domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 Pfam PF01464 Transglycosylase SLT domain 125 224 2.5E-25 T 13-09-2016 IPR008258 Transglycosylase SLT domain 1 PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 PANTHER PTHR21666:SF206 364 471 2.2E-146 T 13-09-2016 PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 Pfam PF01476 LysM domain 364 404 2.1E-9 T 13-09-2016 IPR018392 LysM domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 Pfam PF01476 LysM domain 430 471 2.3E-8 T 13-09-2016 IPR018392 LysM domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 SMART SM00257 363 406 1.2E-9 T 13-09-2016 IPR018392 LysM domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 SMART SM00257 429 472 2.0E-7 T 13-09-2016 IPR018392 LysM domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 Gene3D G3DSA:1.10.530.10 111 272 1.3E-46 T 13-09-2016 PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 PANTHER PTHR21666 364 471 2.2E-146 T 13-09-2016 PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 PANTHER PTHR21666:SF206 68 346 2.2E-146 T 13-09-2016 PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 SUPERFAMILY SSF54106 428 471 7.32E-10 T 13-09-2016 IPR018392 LysM domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 SUPERFAMILY SSF53955 114 273 9.84E-42 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 SUPERFAMILY SSF54106 363 405 3.27E-9 T 13-09-2016 IPR018392 LysM domain PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 PANTHER PTHR21666 68 346 2.2E-146 T 13-09-2016 PMA3_RS15395 3eba9b8986edf4f0b3762a66a879adb9 475 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 134 162 - T 13-09-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PMA3_RS29075 4c64a84126803c802478e8b036d6ca36 325 Pfam PF00107 Zinc-binding dehydrogenase 151 272 3.6E-33 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS29075 4c64a84126803c802478e8b036d6ca36 325 Gene3D G3DSA:3.40.50.720 146 262 7.1E-37 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS29075 4c64a84126803c802478e8b036d6ca36 325 PANTHER PTHR11695:SF31 15 325 2.7E-138 T 13-09-2016 PMA3_RS29075 4c64a84126803c802478e8b036d6ca36 325 SUPERFAMILY SSF51735 112 273 3.94E-52 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS29075 4c64a84126803c802478e8b036d6ca36 325 PANTHER PTHR11695 15 325 2.7E-138 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS29075 4c64a84126803c802478e8b036d6ca36 325 SMART SM00829 10 322 1.7E-57 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS29075 4c64a84126803c802478e8b036d6ca36 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 5.7E-12 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS29075 4c64a84126803c802478e8b036d6ca36 325 SUPERFAMILY SSF50129 1 140 1.52E-39 T 13-09-2016 IPR011032 GroES-like PMA3_RS29075 4c64a84126803c802478e8b036d6ca36 325 Gene3D G3DSA:3.90.180.10 1 145 1.2E-48 T 13-09-2016 IPR011032 GroES-like PMA3_RS13700 8c65fadce6a988ea032cfcfdd25f4b16 292 Gene3D G3DSA:3.40.190.10 170 254 6.6E-11 T 13-09-2016 PMA3_RS13700 8c65fadce6a988ea032cfcfdd25f4b16 292 SUPERFAMILY SSF53850 85 285 1.96E-35 T 13-09-2016 PMA3_RS13700 8c65fadce6a988ea032cfcfdd25f4b16 292 SUPERFAMILY SSF46785 2 109 1.3E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13700 8c65fadce6a988ea032cfcfdd25f4b16 292 PANTHER PTHR30126:SF31 1 285 5.2E-113 T 13-09-2016 PMA3_RS13700 8c65fadce6a988ea032cfcfdd25f4b16 292 PANTHER PTHR30126 1 285 5.2E-113 T 13-09-2016 PMA3_RS13700 8c65fadce6a988ea032cfcfdd25f4b16 292 Gene3D G3DSA:1.10.10.10 2 83 5.8E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13700 8c65fadce6a988ea032cfcfdd25f4b16 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.7E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13700 8c65fadce6a988ea032cfcfdd25f4b16 292 Gene3D G3DSA:3.40.190.10 88 169 1.7E-15 T 13-09-2016 PMA3_RS13700 8c65fadce6a988ea032cfcfdd25f4b16 292 Pfam PF03466 LysR substrate binding domain 85 285 5.2E-40 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS19330 87f474fc81275616c9b89d99de6d5e98 282 Gene3D G3DSA:1.10.3720.10 84 265 1.1E-32 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS19330 87f474fc81275616c9b89d99de6d5e98 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 265 1.3E-21 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS19330 87f474fc81275616c9b89d99de6d5e98 282 PANTHER PTHR30177 5 270 6.1E-82 T 13-09-2016 PMA3_RS19330 87f474fc81275616c9b89d99de6d5e98 282 SUPERFAMILY SSF161098 84 269 7.46E-36 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS19330 87f474fc81275616c9b89d99de6d5e98 282 PANTHER PTHR30177:SF2 5 270 6.1E-82 T 13-09-2016 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 368 41.491 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 Pfam PF02119 Flagellar P-ring protein 23 367 2.1E-144 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PANTHER PTHR30381 4 368 2.5E-220 T 13-09-2016 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PRINTS PR01010 Flagellar P-ring protein signature 107 124 6.2E-89 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PRINTS PR01010 Flagellar P-ring protein signature 124 142 6.2E-89 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PRINTS PR01010 Flagellar P-ring protein signature 191 209 6.2E-89 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PRINTS PR01010 Flagellar P-ring protein signature 38 53 6.2E-89 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PRINTS PR01010 Flagellar P-ring protein signature 165 183 6.2E-89 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PRINTS PR01010 Flagellar P-ring protein signature 255 267 6.2E-89 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PRINTS PR01010 Flagellar P-ring protein signature 23 38 6.2E-89 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PRINTS PR01010 Flagellar P-ring protein signature 85 104 6.2E-89 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PRINTS PR01010 Flagellar P-ring protein signature 58 73 6.2E-89 T 13-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PMA3_RS21800 3a2c1eb142755cc59df8688089e406e1 368 PANTHER PTHR30381:SF1 4 368 2.5E-220 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00091 158 229 1.1E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00091 30 98 0.21 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00091 283 351 24.0 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00091 537 604 1.5E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00091 412 479 2.0E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Gene3D G3DSA:3.20.20.450 840 1091 7.6E-101 T 13-09-2016 IPR001633 EAL domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SUPERFAMILY SSF141868 842 1091 2.62E-93 T 13-09-2016 IPR001633 EAL domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Gene3D G3DSA:3.30.70.270 662 835 5.1E-59 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SUPERFAMILY SSF55785 269 398 4.54E-17 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 PANTHER PTHR33121 631 640 1.4E-85 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 PANTHER PTHR33121 786 1092 1.4E-85 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SUPERFAMILY SSF55785 397 523 7.33E-22 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 PANTHER PTHR33121:SF13 631 640 1.4E-85 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 PANTHER PTHR33121:SF13 786 1092 1.4E-85 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00052 837 1086 5.7E-119 T 13-09-2016 IPR001633 EAL domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Pfam PF13426 PAS domain 422 524 1.2E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Pfam PF13426 PAS domain 547 648 6.9E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Pfam PF00563 EAL domain 844 1081 9.4E-77 T 13-09-2016 IPR001633 EAL domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00086 105 146 4.0 T 13-09-2016 IPR001610 PAC motif PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00086 610 650 1.3 T 13-09-2016 IPR001610 PAC motif PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00086 358 400 1.1E-6 T 13-09-2016 IPR001610 PAC motif PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00086 231 271 6.3 T 13-09-2016 IPR001610 PAC motif PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00086 485 525 23.0 T 13-09-2016 IPR001610 PAC motif PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Gene3D G3DSA:3.30.450.20 144 267 1.4E-17 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Gene3D G3DSA:3.30.450.20 523 648 5.7E-26 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Gene3D G3DSA:3.30.450.20 398 522 3.4E-22 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 658 826 3.8E-46 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SMART SM00267 650 827 3.4E-67 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SUPERFAMILY SSF55785 522 648 4.01E-24 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SUPERFAMILY SSF55073 666 828 6.12E-49 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Gene3D G3DSA:3.30.450.20 27 143 1.8E-19 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Gene3D G3DSA:3.30.450.20 274 397 7.3E-24 T 13-09-2016 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 280 407 4.0E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 153 2.5E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 533 656 1.8E-21 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 155 278 2.9E-12 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 409 532 4.1E-20 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Pfam PF00990 Diguanylate cyclase, GGDEF domain 661 823 1.1E-48 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SUPERFAMILY SSF55785 42 153 5.41E-18 T 13-09-2016 IPR000014 PAS domain PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Pfam PF08447 PAS fold 306 393 1.4E-10 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Pfam PF08447 PAS fold 52 140 4.0E-11 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 Pfam PF00989 PAS fold 159 263 1.2E-7 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS09005 f0836a132a3f9ba7b2c163485cf03883 1092 SUPERFAMILY SSF55785 143 269 2.44E-18 T 13-09-2016 IPR000014 PAS domain PMA3_RS11535 acc699e3638598b670b99b5dee792606 120 PANTHER PTHR35862 1 109 1.3E-22 T 13-09-2016 PMA3_RS11535 acc699e3638598b670b99b5dee792606 120 Pfam PF04965 Gene 25-like lysozyme 23 106 2.0E-13 T 13-09-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD PMA3_RS11535 acc699e3638598b670b99b5dee792606 120 SUPERFAMILY SSF160719 23 116 2.75E-19 T 13-09-2016 PMA3_RS11535 acc699e3638598b670b99b5dee792606 120 PANTHER PTHR35862:SF2 1 109 1.3E-22 T 13-09-2016 PMA3_RS11535 acc699e3638598b670b99b5dee792606 120 Gene3D G3DSA:3.10.450.40 3 114 2.2E-27 T 13-09-2016 PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 PIRSF PIRSF002764 1 221 6.5E-79 T 13-09-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 Pfam PF03379 CcmB protein 7 218 5.8E-84 T 13-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 PANTHER PTHR30070:SF1 1 221 3.3E-65 T 13-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 9.5E-69 T 13-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 9.5E-69 T 13-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 9.5E-69 T 13-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 133 156 9.5E-69 T 13-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 9.5E-69 T 13-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 9.5E-69 T 13-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 PANTHER PTHR30070 1 221 3.3E-65 T 13-09-2016 PMA3_RS21515 5bb6de5bbe79a2ec637ae2f0970eb8b5 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 7 217 2.7E-86 T 13-09-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PMA3_RS12675 1dbc4a8bc9893bbce4e88dce97d1f58e 345 Pfam PF13515 Fusaric acid resistance protein-like 197 324 6.6E-7 T 13-09-2016 PMA3_RS12675 1dbc4a8bc9893bbce4e88dce97d1f58e 345 PIRSF PIRSF029594 10 345 1.8E-142 T 13-09-2016 IPR016926 Uncharacterised conserved protein UCP029594 PMA3_RS12675 1dbc4a8bc9893bbce4e88dce97d1f58e 345 Pfam PF11168 Protein of unknown function (DUF2955) 17 156 3.7E-40 T 13-09-2016 IPR022604 Protein of unknown function DUF2955 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 76 92 4.8E-43 T 13-09-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 109 129 4.8E-43 T 13-09-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 301 317 4.8E-43 T 13-09-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 262 280 4.8E-43 T 13-09-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 144 161 4.8E-43 T 13-09-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 390 405 4.8E-43 T 13-09-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 Gene3D G3DSA:2.30.250.10 87 220 3.3E-46 T 13-09-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 PANTHER PTHR28570 1 424 7.9E-192 T 13-09-2016 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 12 423 3.3E-138 T 13-09-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 Gene3D G3DSA:3.40.630.10 223 423 2.5E-119 T 13-09-2016 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 Gene3D G3DSA:3.40.630.10 4 86 2.5E-119 T 13-09-2016 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 Hamap MF_00467 Probable M18 family aminopeptidase 2 [apeB]. 1 425 55.764 T 13-09-2016 IPR022984 M18 family aminopeptidase 2, putative GO:0004177 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 SUPERFAMILY SSF53187 3 87 5.78E-106 T 13-09-2016 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 SUPERFAMILY SSF53187 214 423 5.78E-106 T 13-09-2016 PMA3_RS07750 ccce1c7b3c1fa32c3da275c3a3a54618 429 SUPERFAMILY SSF101821 88 213 5.58E-33 T 13-09-2016 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 PANTHER PTHR26402 278 327 4.9E-15 T 13-09-2016 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 Pfam PF00196 Bacterial regulatory proteins, luxR family 850 904 1.3E-18 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 SUPERFAMILY SSF52540 24 109 8.52E-8 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 SUPERFAMILY SSF52540 141 251 8.52E-8 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 851 865 6.3E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 865 881 6.3E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 881 893 6.3E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 Gene3D G3DSA:1.25.40.10 466 802 1.1E-36 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 PANTHER PTHR26402 830 911 4.9E-15 T 13-09-2016 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 ProSitePatterns PS00622 LuxR-type HTH domain signature. 865 892 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 PANTHER PTHR26402:SF151 278 327 4.9E-15 T 13-09-2016 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 SUPERFAMILY SSF48452 469 795 8.47E-8 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 SMART SM00421 848 905 2.0E-23 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 Gene3D G3DSA:1.10.10.10 844 910 5.9E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 PANTHER PTHR26402:SF151 830 911 4.9E-15 T 13-09-2016 PMA3_RS03950 7ca555362541656ea5a75e35c4c64bb7 912 SUPERFAMILY SSF46894 838 911 8.5E-21 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS17850 c7730915488d06fd1890196f160df337 466 PANTHER PTHR11785 4 455 8.3E-227 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS17850 c7730915488d06fd1890196f160df337 466 PIRSF PIRSF006060 1 458 3.9E-72 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS17850 c7730915488d06fd1890196f160df337 466 PANTHER PTHR11785:SF24 4 455 8.3E-227 T 13-09-2016 PMA3_RS17850 c7730915488d06fd1890196f160df337 466 TIGRFAM TIGR01773 GABAperm: GABA permease 9 454 2.0E-206 T 13-09-2016 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 PMA3_RS17850 c7730915488d06fd1890196f160df337 466 Pfam PF00324 Amino acid permease 21 429 1.2E-108 T 13-09-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PMA3_RS17850 c7730915488d06fd1890196f160df337 466 ProSitePatterns PS00218 Amino acid permeases signature. 46 76 - T 13-09-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PMA3_RS14060 50dcce5c832c9641af4c49db69c610ec 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 292 2.4E-16 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS14060 50dcce5c832c9641af4c49db69c610ec 379 Gene3D G3DSA:2.40.50.100 216 248 3.0E-16 T 13-09-2016 PMA3_RS14060 50dcce5c832c9641af4c49db69c610ec 379 Gene3D G3DSA:2.40.50.100 63 94 3.0E-16 T 13-09-2016 PMA3_RS14060 50dcce5c832c9641af4c49db69c610ec 379 SUPERFAMILY SSF111369 61 135 3.4E-10 T 13-09-2016 PMA3_RS14060 50dcce5c832c9641af4c49db69c610ec 379 SUPERFAMILY SSF111369 166 296 7.06E-6 T 13-09-2016 PMA3_RS14060 50dcce5c832c9641af4c49db69c610ec 379 PANTHER PTHR30367 30 379 4.0E-58 T 13-09-2016 PMA3_RS11195 90586d23cbeef17fd1d81f17d8d5ccf4 161 SMART SM00903 11 156 4.8E-53 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS11195 90586d23cbeef17fd1d81f17d8d5ccf4 161 Gene3D G3DSA:2.30.110.10 4 157 3.0E-49 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS11195 90586d23cbeef17fd1d81f17d8d5ccf4 161 PANTHER PTHR30466 2 153 2.7E-35 T 13-09-2016 PMA3_RS11195 90586d23cbeef17fd1d81f17d8d5ccf4 161 Pfam PF01613 Flavin reductase like domain 11 155 9.9E-35 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS11195 90586d23cbeef17fd1d81f17d8d5ccf4 161 SUPERFAMILY SSF50475 2 156 3.37E-46 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 SMART SM00116 72 121 6.3 T 13-09-2016 IPR000644 CBS domain PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 SMART SM00116 136 184 1.5 T 13-09-2016 IPR000644 CBS domain PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 SUPERFAMILY SSF56176 198 277 3.82E-22 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 SMART SM01091 200 278 1.3E-27 T 13-09-2016 IPR005170 Transporter-associated domain PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 Pfam PF00571 CBS domain 136 184 1.0E-5 T 13-09-2016 IPR000644 CBS domain PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 Pfam PF00571 CBS domain 63 120 0.002 T 13-09-2016 IPR000644 CBS domain PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 SUPERFAMILY SSF54631 60 198 6.82E-32 T 13-09-2016 PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 PANTHER PTHR22777 15 279 5.3E-114 T 13-09-2016 PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 Gene3D G3DSA:3.10.580.10 51 191 3.1E-20 T 13-09-2016 PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 Gene3D G3DSA:3.30.465.10 192 277 8.1E-26 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 PANTHER PTHR22777:SF17 15 279 5.3E-114 T 13-09-2016 PMA3_RS02700 3c22681863a175de36401b049ad565a8 279 Pfam PF03471 Transporter associated domain 202 276 2.8E-19 T 13-09-2016 IPR005170 Transporter-associated domain PMA3_RS04685 07daf5a9dc0ae09fccdd3fecb6ebc0e2 273 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 249 2.4E-69 T 13-09-2016 PMA3_RS04685 07daf5a9dc0ae09fccdd3fecb6ebc0e2 273 SUPERFAMILY SSF51621 7 271 8.9E-62 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS04685 07daf5a9dc0ae09fccdd3fecb6ebc0e2 273 Gene3D G3DSA:3.20.20.60 4 231 6.7E-61 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS04685 07daf5a9dc0ae09fccdd3fecb6ebc0e2 273 PANTHER PTHR21631 4 262 3.8E-77 T 13-09-2016 PMA3_RS04685 07daf5a9dc0ae09fccdd3fecb6ebc0e2 273 PANTHER PTHR21631:SF18 4 262 3.8E-77 T 13-09-2016 PMA3_RS16940 cea649b566cbfa7be471f032a91efc51 138 Pfam PF02566 OsmC-like protein 39 135 6.7E-19 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS16940 cea649b566cbfa7be471f032a91efc51 138 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 136 4.8E-50 T 13-09-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 PMA3_RS16940 cea649b566cbfa7be471f032a91efc51 138 Gene3D G3DSA:3.30.300.20 47 137 1.4E-34 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS16940 cea649b566cbfa7be471f032a91efc51 138 SUPERFAMILY SSF82784 5 137 3.53E-43 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS16940 cea649b566cbfa7be471f032a91efc51 138 PANTHER PTHR33797 2 137 1.3E-59 T 13-09-2016 PMA3_RS16940 cea649b566cbfa7be471f032a91efc51 138 Gene3D G3DSA:2.20.25.10 3 46 1.2E-18 T 13-09-2016 PMA3_RS16940 cea649b566cbfa7be471f032a91efc51 138 PANTHER PTHR33797:SF3 2 137 1.3E-59 T 13-09-2016 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 SUPERFAMILY SSF54373 292 474 1.96E-60 T 13-09-2016 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 SUPERFAMILY SSF51905 473 532 8.51E-88 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 SUPERFAMILY SSF51905 1 290 8.51E-88 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 13-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 Gene3D G3DSA:3.50.50.60 3 127 3.0E-122 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 Gene3D G3DSA:3.50.50.60 467 530 3.0E-122 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 Gene3D G3DSA:3.50.50.60 189 315 3.0E-122 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 PIRSF PIRSF000137 1 536 2.1E-145 T 13-09-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 Pfam PF05199 GMC oxidoreductase 388 524 1.7E-41 T 13-09-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 PANTHER PTHR11552 4 550 6.1E-241 T 13-09-2016 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 83 106 - T 13-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 TIGRFAM TIGR01810 betA: choline dehydrogenase 7 533 1.5E-236 T 13-09-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 PANTHER PTHR11552:SF51 4 550 6.1E-241 T 13-09-2016 PMA3_RS17240 3ccda0f85b7f043879f6c67ad9aaba71 562 Pfam PF00732 GMC oxidoreductase 6 297 6.6E-97 T 13-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PMA3_RS21980 955a21e8ca5b6662aaf75b28801261e9 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 7.8E-11 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS21980 955a21e8ca5b6662aaf75b28801261e9 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 7.8E-11 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS21980 955a21e8ca5b6662aaf75b28801261e9 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 7.8E-11 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS21980 955a21e8ca5b6662aaf75b28801261e9 144 PANTHER PTHR33164 4 142 1.0E-25 T 13-09-2016 PMA3_RS21980 955a21e8ca5b6662aaf75b28801261e9 144 SUPERFAMILY SSF46785 10 142 2.31E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21980 955a21e8ca5b6662aaf75b28801261e9 144 SMART SM00347 26 127 6.7E-20 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS21980 955a21e8ca5b6662aaf75b28801261e9 144 Pfam PF12802 MarR family 31 91 1.1E-12 T 13-09-2016 PMA3_RS21980 955a21e8ca5b6662aaf75b28801261e9 144 Gene3D G3DSA:1.10.10.10 3 143 4.4E-35 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21980 955a21e8ca5b6662aaf75b28801261e9 144 PANTHER PTHR33164:SF16 4 142 1.0E-25 T 13-09-2016 PMA3_RS24725 6a411c89ef3128db80d2e19e7a9af0cf 324 SUPERFAMILY SSF52283 1 132 5.29E-29 T 13-09-2016 PMA3_RS24725 6a411c89ef3128db80d2e19e7a9af0cf 324 PANTHER PTHR10996 1 323 1.0E-128 T 13-09-2016 PMA3_RS24725 6a411c89ef3128db80d2e19e7a9af0cf 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 13-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PMA3_RS24725 6a411c89ef3128db80d2e19e7a9af0cf 324 Gene3D G3DSA:3.40.50.720 114 289 3.0E-63 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24725 6a411c89ef3128db80d2e19e7a9af0cf 324 SUPERFAMILY SSF51735 100 287 2.07E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24725 6a411c89ef3128db80d2e19e7a9af0cf 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 286 2.3E-58 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS24725 6a411c89ef3128db80d2e19e7a9af0cf 324 Gene3D G3DSA:3.40.50.720 3 113 1.1E-29 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24725 6a411c89ef3128db80d2e19e7a9af0cf 324 PANTHER PTHR10996:SF118 1 323 1.0E-128 T 13-09-2016 PMA3_RS24725 6a411c89ef3128db80d2e19e7a9af0cf 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 1.3E-28 T 13-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 Gene3D G3DSA:2.40.50.140 1 123 2.3E-64 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 PANTHER PTHR11652 1 116 2.6E-73 T 13-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.571 T 13-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 PIRSF PIRSF002133 1 123 1.0E-52 T 13-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 Pfam PF00164 Ribosomal protein S12/S23 9 123 2.1E-42 T 13-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.6E-59 T 13-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.6E-59 T 13-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.6E-59 T 13-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.6E-59 T 13-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.6E-59 T 13-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.6E-59 T 13-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.0E-69 T 13-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27290 eb8b45d16cc1f4d2b8d3422fbd2cbcc2 123 SUPERFAMILY SSF50249 3 123 6.28E-51 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS03425 7676a11c919214e7111d2aec9f2b5517 98 Pfam PF11006 Protein of unknown function (DUF2845) 22 94 4.5E-20 T 13-09-2016 IPR021268 Protein of unknown function DUF2845 PMA3_RS27540 f76ea13559a6ffa7d406994a5ed01a1c 223 PANTHER PTHR22572:SF15 2 219 1.5E-46 T 13-09-2016 PMA3_RS27540 f76ea13559a6ffa7d406994a5ed01a1c 223 Gene3D G3DSA:3.90.550.10 1 221 8.0E-52 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS27540 f76ea13559a6ffa7d406994a5ed01a1c 223 Pfam PF00483 Nucleotidyl transferase 2 116 1.4E-20 T 13-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PMA3_RS27540 f76ea13559a6ffa7d406994a5ed01a1c 223 SUPERFAMILY SSF53448 1 219 1.19E-53 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS27540 f76ea13559a6ffa7d406994a5ed01a1c 223 PANTHER PTHR22572 2 219 1.5E-46 T 13-09-2016 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 Pfam PF13432 Tetratricopeptide repeat 291 346 1.2E-4 T 13-09-2016 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 Pfam PF13174 Tetratricopeptide repeat 530 558 0.17 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 SMART SM00028 457 491 84.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 SMART SM00028 219 252 25.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 SMART SM00028 287 320 81.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 SMART SM00028 389 422 350.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 SMART SM00028 492 525 0.021 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 SMART SM00028 423 456 11.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 PANTHER PTHR23083:SF195 59 568 7.4E-78 T 13-09-2016 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 SUPERFAMILY SSF48452 219 345 3.5E-19 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 PANTHER PTHR23083 59 568 7.4E-78 T 13-09-2016 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 SUPERFAMILY SSF48452 391 560 2.88E-26 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 Gene3D G3DSA:1.25.40.10 352 559 1.6E-31 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 Gene3D G3DSA:1.25.40.10 61 210 3.0E-7 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 Pfam PF14559 Tetratricopeptide repeat 473 528 2.9E-7 T 13-09-2016 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 Pfam PF14559 Tetratricopeptide repeat 235 277 6.0E-7 T 13-09-2016 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 Gene3D G3DSA:1.25.40.10 224 347 4.1E-17 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS03760 a8883f81f3919c6bc7bf2ff53df362a6 574 SUPERFAMILY SSF48452 109 210 2.02E-8 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 PANTHER PTHR32303 32 370 4.5E-77 T 13-09-2016 PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 SUPERFAMILY SSF50998 32 372 2.02E-77 T 13-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 4 382 38.812 T 13-09-2016 IPR017687 Outer membrane protein assembly factor BamB PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 Gene3D G3DSA:2.140.10.10 8 382 1.3E-69 T 13-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 PANTHER PTHR32303:SF8 32 370 4.5E-77 T 13-09-2016 PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 380 2.0E-133 T 13-09-2016 IPR017687 Outer membrane protein assembly factor BamB PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 Pfam PF13360 PQQ-like domain 292 381 9.7E-5 T 13-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 Pfam PF13360 PQQ-like domain 102 288 3.2E-42 T 13-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 SMART SM00564 240 272 5.9E-4 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 SMART SM00564 145 176 4.1 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 SMART SM00564 189 221 69.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 SMART SM00564 65 96 9.5E-6 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 SMART SM00564 279 310 290.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24200 429517d1e21d56a02c0c29387c158aee 383 SMART SM00564 104 136 0.076 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24020 c5633c37d5d77d6ce102686272a60e3f 76 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 6 67 3.3E-35 T 13-09-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 PMA3_RS24020 c5633c37d5d77d6ce102686272a60e3f 76 Gene3D G3DSA:1.10.720.30 13 71 1.8E-33 T 13-09-2016 IPR003034 SAP domain PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 SUPERFAMILY SSF53697 7 321 3.34E-66 T 13-09-2016 PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 PANTHER PTHR38418 5 205 3.1E-37 T 13-09-2016 PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 2.3E-110 T 13-09-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 Pfam PF00571 CBS domain 212 257 7.9E-4 T 13-09-2016 IPR000644 CBS domain PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 Pfam PF00571 CBS domain 277 321 8.6E-9 T 13-09-2016 IPR000644 CBS domain PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 PIRSF PIRSF004692 1 324 2.4E-131 T 13-09-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 Pfam PF01380 SIS domain 41 172 3.0E-32 T 13-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 PANTHER PTHR38418:SF1 5 205 3.1E-37 T 13-09-2016 PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 SMART SM00116 210 258 1.8 T 13-09-2016 IPR000644 CBS domain PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 SMART SM00116 275 323 0.0068 T 13-09-2016 IPR000644 CBS domain PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 Gene3D G3DSA:3.10.580.10 196 321 9.7E-39 T 13-09-2016 PMA3_RS25080 f1b28fa65fc8b8cdf6907293c8c4df64 324 Gene3D G3DSA:3.40.50.10490 13 195 1.7E-50 T 13-09-2016 PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 SUPERFAMILY SSF52540 464 710 7.38E-88 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 Pfam PF03412 Peptidase C39 family 11 132 1.9E-23 T 13-09-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 SUPERFAMILY SSF90123 146 457 4.84E-71 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 Pfam PF00664 ABC transporter transmembrane region 161 425 1.3E-54 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 PANTHER PTHR24221:SF246 108 712 2.6E-303 T 13-09-2016 PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 Gene3D G3DSA:3.40.50.300 472 703 2.0E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 16 711 0.0 T 13-09-2016 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 ProSitePatterns PS00211 ABC transporters family signature. 611 625 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 SMART SM00382 499 691 9.5E-19 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 Gene3D G3DSA:3.90.70.10 13 132 2.3E-33 T 13-09-2016 PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 Pfam PF00005 ABC transporter 490 639 1.7E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 PANTHER PTHR24221 108 712 2.6E-303 T 13-09-2016 PMA3_RS25000 22636ce30ce1a332174885bb9a2bf1dd 712 Gene3D G3DSA:1.20.1560.10 146 457 1.7E-83 T 13-09-2016 PMA3_RS19200 fa799d41c82166635243bfeba5ab0541 496 PANTHER PTHR11699 24 496 5.3E-271 T 13-09-2016 PMA3_RS19200 fa799d41c82166635243bfeba5ab0541 496 Gene3D G3DSA:3.40.309.10 267 455 3.8E-52 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS19200 fa799d41c82166635243bfeba5ab0541 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS19200 fa799d41c82166635243bfeba5ab0541 496 PANTHER PTHR11699:SF144 24 496 5.3E-271 T 13-09-2016 PMA3_RS19200 fa799d41c82166635243bfeba5ab0541 496 SUPERFAMILY SSF53720 17 483 4.58E-132 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS19200 fa799d41c82166635243bfeba5ab0541 496 Pfam PF00171 Aldehyde dehydrogenase family 21 478 2.2E-128 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS19200 fa799d41c82166635243bfeba5ab0541 496 Gene3D G3DSA:3.40.605.10 20 266 5.2E-71 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS05050 72b656738ed1fadc30eb1fbee8daa0b0 232 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 143 2.6E-48 T 13-09-2016 IPR023370 TsaA-like domain PMA3_RS05050 72b656738ed1fadc30eb1fbee8daa0b0 232 Gene3D G3DSA:2.40.30.70 3 146 6.2E-54 T 13-09-2016 IPR023370 TsaA-like domain PMA3_RS05050 72b656738ed1fadc30eb1fbee8daa0b0 232 PANTHER PTHR12818:SF6 2 229 1.6E-104 T 13-09-2016 PMA3_RS05050 72b656738ed1fadc30eb1fbee8daa0b0 232 SUPERFAMILY SSF118196 1 219 2.35E-74 T 13-09-2016 IPR023370 TsaA-like domain PMA3_RS05050 72b656738ed1fadc30eb1fbee8daa0b0 232 Pfam PF01980 Uncharacterised protein family UPF0066 20 138 1.8E-42 T 13-09-2016 IPR023370 TsaA-like domain PMA3_RS05050 72b656738ed1fadc30eb1fbee8daa0b0 232 ProSitePatterns PS01318 TsaA-like domain signature. 86 97 - T 13-09-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site PMA3_RS05050 72b656738ed1fadc30eb1fbee8daa0b0 232 PANTHER PTHR12818 2 229 1.6E-104 T 13-09-2016 PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 SUPERFAMILY SSF50129 2 153 2.04E-39 T 13-09-2016 IPR011032 GroES-like PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 SUPERFAMILY SSF50129 326 353 2.04E-39 T 13-09-2016 IPR011032 GroES-like PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 Pfam PF00107 Zinc-binding dehydrogenase 186 304 1.8E-27 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 PANTHER PTHR11695 116 357 6.6E-111 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 13-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 PANTHER PTHR11695:SF281 15 87 6.6E-111 T 13-09-2016 PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 Gene3D G3DSA:3.40.50.720 179 297 2.3E-40 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 138 1.1E-21 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 SUPERFAMILY SSF51735 149 319 9.2E-43 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 Gene3D G3DSA:3.90.180.10 2 178 9.7E-42 T 13-09-2016 IPR011032 GroES-like PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 SMART SM00829 12 355 1.3E-6 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 PANTHER PTHR11695 15 87 6.6E-111 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS17330 2be1be9a2ab890c8d3ebf2569b22c547 357 PANTHER PTHR11695:SF281 116 357 6.6E-111 T 13-09-2016 PMA3_RS07050 b88609d4716fc8d796f31c1bb6528e2b 355 SUPERFAMILY SSF53850 36 348 1.27E-45 T 13-09-2016 PMA3_RS07050 b88609d4716fc8d796f31c1bb6528e2b 355 Pfam PF13343 Bacterial extracellular solute-binding protein 87 337 5.8E-53 T 13-09-2016 PMA3_RS07050 b88609d4716fc8d796f31c1bb6528e2b 355 Gene3D G3DSA:3.40.190.10 1 134 5.4E-24 T 13-09-2016 PMA3_RS07050 b88609d4716fc8d796f31c1bb6528e2b 355 Gene3D G3DSA:3.40.190.10 278 320 5.4E-24 T 13-09-2016 PMA3_RS07050 b88609d4716fc8d796f31c1bb6528e2b 355 PANTHER PTHR30006 1 355 1.1E-100 T 13-09-2016 PMA3_RS07050 b88609d4716fc8d796f31c1bb6528e2b 355 PANTHER PTHR30006:SF10 1 355 1.1E-100 T 13-09-2016 PMA3_RS07050 b88609d4716fc8d796f31c1bb6528e2b 355 Gene3D G3DSA:3.40.190.10 139 277 9.7E-23 T 13-09-2016 PMA3_RS03090 eb26db94c553551eb43420e84815daf5 417 Gene3D G3DSA:3.90.1150.10 285 416 2.4E-54 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS03090 eb26db94c553551eb43420e84815daf5 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 13-09-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS03090 eb26db94c553551eb43420e84815daf5 417 PIRSF PIRSF000412 2 417 5.2E-165 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS03090 eb26db94c553551eb43420e84815daf5 417 Pfam PF00464 Serine hydroxymethyltransferase 9 385 2.6E-182 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS03090 eb26db94c553551eb43420e84815daf5 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.878 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS03090 eb26db94c553551eb43420e84815daf5 417 SUPERFAMILY SSF53383 6 416 7.93E-181 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS03090 eb26db94c553551eb43420e84815daf5 417 PANTHER PTHR11680:SF9 8 416 0.0 T 13-09-2016 PMA3_RS03090 eb26db94c553551eb43420e84815daf5 417 Gene3D G3DSA:3.40.640.10 37 284 1.5E-107 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS03090 eb26db94c553551eb43420e84815daf5 417 PANTHER PTHR11680 8 416 0.0 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 1.1E-19 T 13-09-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 1.1E-19 T 13-09-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 1.1E-19 T 13-09-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 1.1E-19 T 13-09-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 PRINTS PR01005 Flagellar hook-associated protein signature 412 429 1.1E-19 T 13-09-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 SUPERFAMILY SSF64518 497 669 1.57E-18 T 13-09-2016 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 SUPERFAMILY SSF64518 122 473 2.62E-19 T 13-09-2016 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 Pfam PF00460 Flagella basal body rod protein 4 33 7.3E-6 T 13-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 PANTHER PTHR30033:SF1 533 669 1.7E-103 T 13-09-2016 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 607 667 1.0E-8 T 13-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 PANTHER PTHR30033:SF1 1 502 1.7E-103 T 13-09-2016 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 PANTHER PTHR30033 1 502 1.7E-103 T 13-09-2016 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 13-09-2016 IPR019776 Flagellar basal body rod protein, conserved site PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 376 3.3E-72 T 13-09-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PMA3_RS21790 f28cd675caaec367c9de49d25a12e232 669 PANTHER PTHR30033 533 669 1.7E-103 T 13-09-2016 PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 Gene3D G3DSA:3.40.50.970 377 535 2.5E-42 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 SUPERFAMILY SSF52518 364 535 8.76E-40 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 533 1.4E-27 T 13-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 Gene3D G3DSA:3.40.50.970 2 183 9.3E-49 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 174 7.5E-43 T 13-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 PANTHER PTHR18968 1 533 2.0E-129 T 13-09-2016 PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 Gene3D G3DSA:3.40.50.1220 192 376 2.7E-30 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 SUPERFAMILY SSF52467 162 351 1.41E-30 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 423 442 - T 13-09-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 SUPERFAMILY SSF52518 7 188 4.95E-41 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 326 7.7E-17 T 13-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PMA3_RS18865 3527b3e42771865c7eae915ca083a59d 560 PANTHER PTHR18968:SF13 1 533 2.0E-129 T 13-09-2016 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 Pfam PF01624 MutS domain I 12 123 2.3E-43 T 13-09-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 Pfam PF05190 MutS family domain IV 431 521 1.6E-27 T 13-09-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 SUPERFAMILY SSF52540 572 800 2.44E-58 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 SMART SM00534 610 796 6.0E-120 T 13-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 11 851 24.991 T 13-09-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 Gene3D G3DSA:3.40.50.300 572 799 2.2E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 SUPERFAMILY SSF48334 271 568 1.44E-83 T 13-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 PANTHER PTHR11361:SF86 6 800 0.0 T 13-09-2016 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 Gene3D G3DSA:3.40.1170.10 7 124 4.8E-52 T 13-09-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 Pfam PF05188 MutS domain II 132 257 6.7E-30 T 13-09-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 SUPERFAMILY SSF53150 118 270 3.4E-42 T 13-09-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 PANTHER PTHR11361 6 800 0.0 T 13-09-2016 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 691 707 - T 13-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 11 856 0.0 T 13-09-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 Pfam PF05192 MutS domain III 274 562 6.6E-37 T 13-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 SUPERFAMILY SSF55271 6 117 2.49E-43 T 13-09-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 SMART SM00533 287 594 1.6E-99 T 13-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 Gene3D G3DSA:1.10.1420.10 320 480 1.4E-52 T 13-09-2016 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 Gene3D G3DSA:3.30.420.110 130 260 1.5E-42 T 13-09-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PMA3_RS04990 1c4e88a7c8e07c212d1a44581fc2b610 859 Pfam PF00488 MutS domain V 613 799 4.2E-83 T 13-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PMA3_RS09610 7368dddf2a89102ea8aafa3819d01bc3 231 PANTHER PTHR39209 1 226 4.1E-105 T 13-09-2016 PMA3_RS09610 7368dddf2a89102ea8aafa3819d01bc3 231 SUPERFAMILY SSF56037 52 210 3.14E-25 T 13-09-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PMA3_RS09610 7368dddf2a89102ea8aafa3819d01bc3 231 Pfam PF03483 B3/4 domain 65 192 7.8E-17 T 13-09-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PMA3_RS09610 7368dddf2a89102ea8aafa3819d01bc3 231 PANTHER PTHR39209:SF2 1 226 4.1E-105 T 13-09-2016 PMA3_RS09610 7368dddf2a89102ea8aafa3819d01bc3 231 SMART SM00873 61 217 2.0E-13 T 13-09-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PMA3_RS09610 7368dddf2a89102ea8aafa3819d01bc3 231 Gene3D G3DSA:3.50.40.10 59 188 1.3E-8 T 13-09-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 Gene3D G3DSA:3.30.360.10 161 315 1.9E-67 T 13-09-2016 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 Gene3D G3DSA:3.40.50.720 2 160 2.2E-60 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 8.0E-50 T 13-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 SUPERFAMILY SSF55347 152 314 2.44E-64 T 13-09-2016 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 3.2E-59 T 13-09-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 SUPERFAMILY SSF51735 1 179 1.34E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 5.0E-28 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 5.0E-28 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.0E-28 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 5.0E-28 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.0E-28 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 13-09-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 SMART SM00846 3 152 3.6E-73 T 13-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 PANTHER PTHR10836:SF37 1 330 7.8E-222 T 13-09-2016 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 PIRSF PIRSF000149 1 332 1.9E-119 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 PANTHER PTHR10836 1 330 7.8E-222 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS10135 e1b9bd956ffd29067fa9f86aa36f3c03 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.2E-117 T 13-09-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS16665 0843ea56cd8318fe348d81189dfcbe1b 405 PANTHER PTHR32479 14 405 9.0E-131 T 13-09-2016 PMA3_RS16665 0843ea56cd8318fe348d81189dfcbe1b 405 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS16665 0843ea56cd8318fe348d81189dfcbe1b 405 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS16665 0843ea56cd8318fe348d81189dfcbe1b 405 SUPERFAMILY SSF54862 19 119 1.05E-19 T 13-09-2016 PMA3_RS16665 0843ea56cd8318fe348d81189dfcbe1b 405 PANTHER PTHR32479:SF2 14 405 9.0E-131 T 13-09-2016 PMA3_RS16665 0843ea56cd8318fe348d81189dfcbe1b 405 Pfam PF12838 4Fe-4S dicluster domain 24 89 6.0E-12 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS16665 0843ea56cd8318fe348d81189dfcbe1b 405 PIRSF PIRSF000139 5 405 3.7E-125 T 13-09-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit PMA3_RS16665 0843ea56cd8318fe348d81189dfcbe1b 405 Gene3D G3DSA:1.10.1060.10 9 100 4.8E-21 T 13-09-2016 PMA3_RS16665 0843ea56cd8318fe348d81189dfcbe1b 405 Pfam PF02754 Cysteine-rich domain 303 386 1.7E-13 T 13-09-2016 IPR004017 Cysteine-rich domain PMA3_RS16665 0843ea56cd8318fe348d81189dfcbe1b 405 Pfam PF02754 Cysteine-rich domain 170 255 1.8E-12 T 13-09-2016 IPR004017 Cysteine-rich domain PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 SMART SM00729 15 218 5.9E-4 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 PANTHER PTHR11228 12 350 7.3E-115 T 13-09-2016 PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 PIRSF PIRSF037420 2 360 4.3E-132 T 13-09-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 Gene3D G3DSA:3.20.20.70 12 331 2.2E-68 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 256 340 5.2E-8 T 13-09-2016 IPR023885 4Fe4S-binding SPASM domain PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 Pfam PF13186 Iron-sulfur cluster-binding domain 248 313 7.8E-10 T 13-09-2016 IPR023885 4Fe4S-binding SPASM domain PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 380 193.562 T 13-09-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 Pfam PF04055 Radical SAM superfamily 21 176 8.8E-22 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 12 359 4.6E-183 T 13-09-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 Pfam PF13353 4Fe-4S single cluster domain 22 104 4.8E-7 T 13-09-2016 PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 PANTHER PTHR11228:SF32 12 350 7.3E-115 T 13-09-2016 PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 21 32 - T 13-09-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS15645 a2505554ae4afd85be176a70e5f0a5c4 380 SUPERFAMILY SSF102114 13 322 4.97E-76 T 13-09-2016 PMA3_RS15515 76d7d1257cf210c69ffcc87deca4c37c 426 PANTHER PTHR35334 1 426 9.3E-246 T 13-09-2016 PMA3_RS15515 76d7d1257cf210c69ffcc87deca4c37c 426 TIGRFAM TIGR00814 stp: serine transporter 23 415 2.4E-163 T 13-09-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS15515 76d7d1257cf210c69ffcc87deca4c37c 426 Pfam PF03222 Tryptophan/tyrosine permease family 35 412 1.2E-13 T 13-09-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 PMA3_RS15515 76d7d1257cf210c69ffcc87deca4c37c 426 PANTHER PTHR35334:SF2 1 426 9.3E-246 T 13-09-2016 PMA3_RS17475 e67a679aac2649978affb55a2541d3f5 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 185 340 2.5E-45 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS17475 e67a679aac2649978affb55a2541d3f5 357 SUPERFAMILY SSF55073 189 344 3.14E-47 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS17475 e67a679aac2649978affb55a2541d3f5 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 183 342 3.4E-51 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS17475 e67a679aac2649978affb55a2541d3f5 357 SMART SM00267 173 344 2.9E-57 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS17475 e67a679aac2649978affb55a2541d3f5 357 PANTHER PTHR10799 217 342 6.0E-31 T 13-09-2016 PMA3_RS17475 e67a679aac2649978affb55a2541d3f5 357 Pfam PF05230 MASE2 domain 14 101 3.7E-29 T 13-09-2016 IPR007894 MASE2 PMA3_RS17475 e67a679aac2649978affb55a2541d3f5 357 PANTHER PTHR10799:SF750 217 342 6.0E-31 T 13-09-2016 PMA3_RS17475 e67a679aac2649978affb55a2541d3f5 357 Gene3D G3DSA:3.30.70.270 185 344 6.0E-50 T 13-09-2016 PMA3_RS10865 eaac1dd6173bb4b0ef783ae1cf65d5e5 120 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 15 101 5.6E-21 T 13-09-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 PMA3_RS10865 eaac1dd6173bb4b0ef783ae1cf65d5e5 120 PANTHER PTHR34703:SF1 6 98 1.4E-19 T 13-09-2016 PMA3_RS10865 eaac1dd6173bb4b0ef783ae1cf65d5e5 120 PANTHER PTHR34703 6 98 1.4E-19 T 13-09-2016 PMA3_RS10865 eaac1dd6173bb4b0ef783ae1cf65d5e5 120 Pfam PF03334 Na+/H+ antiporter subunit 16 96 1.3E-20 T 13-09-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 PANTHER PTHR11958 5 412 9.3E-166 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 PANTHER PTHR11958:SF49 5 412 9.3E-166 T 13-09-2016 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 Pfam PF00375 Sodium:dicarboxylate symporter family 13 408 1.0E-105 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 2.2E-24 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 PRINTS PR00173 Glutamate-aspartate symporter signature 199 218 2.2E-24 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 2.2E-24 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 PRINTS PR00173 Glutamate-aspartate symporter signature 226 245 2.2E-24 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 2.2E-24 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 2.2E-24 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 PRINTS PR00173 Glutamate-aspartate symporter signature 362 382 2.2E-24 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 SUPERFAMILY SSF118215 13 408 1.96E-107 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10120 c7722bcd6f1082ff9b1a2e0a5a43ce68 433 Gene3D G3DSA:1.10.3860.10 6 413 2.0E-105 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS09615 9f9fd59475630ab3897e024f1cc68d0d 297 SMART SM01130 1 295 1.5E-60 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS09615 9f9fd59475630ab3897e024f1cc68d0d 297 PIRSF PIRSF001365 1 297 3.8E-52 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS09615 9f9fd59475630ab3897e024f1cc68d0d 297 Gene3D G3DSA:3.20.20.70 1 296 1.9E-83 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS09615 9f9fd59475630ab3897e024f1cc68d0d 297 Pfam PF00701 Dihydrodipicolinate synthetase family 2 292 1.1E-34 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS09615 9f9fd59475630ab3897e024f1cc68d0d 297 PANTHER PTHR12128:SF34 1 296 1.7E-42 T 13-09-2016 PMA3_RS09615 9f9fd59475630ab3897e024f1cc68d0d 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 7.4E-6 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS09615 9f9fd59475630ab3897e024f1cc68d0d 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 7.4E-6 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS09615 9f9fd59475630ab3897e024f1cc68d0d 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 7.4E-6 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS09615 9f9fd59475630ab3897e024f1cc68d0d 297 PANTHER PTHR12128 1 296 1.7E-42 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS09615 9f9fd59475630ab3897e024f1cc68d0d 297 SUPERFAMILY SSF51569 1 295 1.26E-59 T 13-09-2016 PMA3_RS18030 30fde553293036c013319bfb15637e63 121 Pfam PF00816 H-NS histone family 14 109 1.4E-5 T 13-09-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 PMA3_RS26545 d29ec0dbc20a9d9e2e08ffac22304a53 440 Gene3D G3DSA:1.10.101.10 386 438 3.2E-10 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS26545 d29ec0dbc20a9d9e2e08ffac22304a53 440 Pfam PF13406 Transglycosylase SLT domain 68 361 3.2E-109 T 13-09-2016 IPR031304 Transglycosylase SLT domain 2 PMA3_RS26545 d29ec0dbc20a9d9e2e08ffac22304a53 440 SUPERFAMILY SSF53955 65 367 1.29E-102 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS26545 d29ec0dbc20a9d9e2e08ffac22304a53 440 PANTHER PTHR30163:SF2 7 438 1.9E-161 T 13-09-2016 PMA3_RS26545 d29ec0dbc20a9d9e2e08ffac22304a53 440 PANTHER PTHR30163 7 438 1.9E-161 T 13-09-2016 IPR011757 Lytic transglycosylase MltB PMA3_RS26545 d29ec0dbc20a9d9e2e08ffac22304a53 440 Gene3D G3DSA:1.10.530.10 111 168 2.6E-58 T 13-09-2016 PMA3_RS26545 d29ec0dbc20a9d9e2e08ffac22304a53 440 Gene3D G3DSA:1.10.530.10 249 365 2.6E-58 T 13-09-2016 PMA3_RS26545 d29ec0dbc20a9d9e2e08ffac22304a53 440 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 68 364 2.2E-117 T 13-09-2016 IPR011970 Lytic murein transglycosylase PMA3_RS26545 d29ec0dbc20a9d9e2e08ffac22304a53 440 SUPERFAMILY SSF47090 372 438 6.28E-14 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS26545 d29ec0dbc20a9d9e2e08ffac22304a53 440 Pfam PF01471 Putative peptidoglycan binding domain 383 434 3.2E-10 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS30235 15b23fb78e4e6e8df979b444d84c9b30 108 PANTHER PTHR36423 4 108 3.5E-18 T 13-09-2016 PMA3_RS30235 15b23fb78e4e6e8df979b444d84c9b30 108 PIRSF PIRSF028139 1 108 1.7E-44 T 13-09-2016 IPR014980 Dopa 4,5-dioxygenase PMA3_RS30235 15b23fb78e4e6e8df979b444d84c9b30 108 Pfam PF08883 Dopa 4,5-dioxygenase family 7 106 5.8E-32 T 13-09-2016 IPR014980 Dopa 4,5-dioxygenase PMA3_RS30235 15b23fb78e4e6e8df979b444d84c9b30 108 SUPERFAMILY SSF143410 2 108 1.83E-42 T 13-09-2016 IPR023389 DOPA-like domain PMA3_RS30235 15b23fb78e4e6e8df979b444d84c9b30 108 Gene3D G3DSA:3.30.70.1240 2 108 3.2E-39 T 13-09-2016 IPR023389 DOPA-like domain PMA3_RS13905 c3198ddcd3f25070df037baead033a3f 345 SMART SM00342 250 332 4.1E-26 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS13905 c3198ddcd3f25070df037baead033a3f 345 Pfam PF12833 Helix-turn-helix domain 256 333 2.1E-17 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS13905 c3198ddcd3f25070df037baead033a3f 345 PANTHER PTHR11019:SF52 231 340 1.7E-22 T 13-09-2016 PMA3_RS13905 c3198ddcd3f25070df037baead033a3f 345 Gene3D G3DSA:1.10.10.60 285 334 1.8E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13905 c3198ddcd3f25070df037baead033a3f 345 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 205 7.5E-44 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS13905 c3198ddcd3f25070df037baead033a3f 345 SUPERFAMILY SSF46689 285 334 1.82E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13905 c3198ddcd3f25070df037baead033a3f 345 PANTHER PTHR11019 231 340 1.7E-22 T 13-09-2016 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 PANTHER PTHR32071 1 467 3.3E-211 T 13-09-2016 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 Gene3D G3DSA:1.10.8.60 332 399 5.8E-17 T 13-09-2016 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 245 260 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 448 468 1.7E-7 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 448 1.7E-7 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 Gene3D G3DSA:3.30.450.20 23 114 1.9E-8 T 13-09-2016 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 Pfam PF02954 Bacterial regulatory protein, Fis family 427 462 8.4E-11 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 SUPERFAMILY SSF52540 158 398 8.22E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 SMART SM00382 178 323 6.9E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 Pfam PF08448 PAS fold 26 116 1.4E-5 T 13-09-2016 IPR013656 PAS fold-4 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 PANTHER PTHR32071:SF22 1 467 3.3E-211 T 13-09-2016 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 SUPERFAMILY SSF55785 19 116 1.52E-10 T 13-09-2016 IPR000014 PAS domain PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 Pfam PF00158 Sigma-54 interaction domain 159 326 9.1E-65 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 182 195 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 Gene3D G3DSA:1.10.10.60 415 467 4.9E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 SUPERFAMILY SSF46689 367 467 2.62E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12380 5090869ccf8867b61a76da45fc32a27e 471 Gene3D G3DSA:3.40.50.300 154 331 3.2E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 SMART SM00450 11 126 5.7E-19 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 SMART SM00450 149 267 4.5E-21 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 PANTHER PTHR11364:SF0 11 270 1.1E-65 T 13-09-2016 PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 PANTHER PTHR11364 11 270 1.1E-65 T 13-09-2016 PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 Pfam PF00581 Rhodanese-like domain 151 262 2.0E-16 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 Pfam PF00581 Rhodanese-like domain 13 122 3.3E-13 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 ProSitePatterns PS00683 Rhodanese C-terminal signature. 251 261 - T 13-09-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 SUPERFAMILY SSF52821 144 271 8.77E-29 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 ProSitePatterns PS00380 Rhodanese signature 1. 36 47 - T 13-09-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 Gene3D G3DSA:3.40.250.10 8 133 7.7E-32 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 Gene3D G3DSA:3.40.250.10 146 271 3.2E-33 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01995 55dea38e4a33842d1bb75e54bf277d32 271 SUPERFAMILY SSF52821 7 129 4.58E-32 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 SMART SM00260 10 145 7.4E-24 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 Gene3D G3DSA:2.30.30.40 83 136 7.0E-4 T 13-09-2016 PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 PIRSF PIRSF002867 1 296 5.4E-87 T 13-09-2016 IPR024181 Chemotaxis response regulator CheV PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 Pfam PF01584 CheW-like domain 13 146 1.4E-32 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 SMART SM00448 171 288 6.6E-18 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 PANTHER PTHR22617:SF37 11 161 1.6E-41 T 13-09-2016 PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 Pfam PF00072 Response regulator receiver domain 173 283 2.3E-15 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 SUPERFAMILY SSF50341 9 148 1.57E-30 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 PANTHER PTHR22617 11 161 1.6E-41 T 13-09-2016 PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 SUPERFAMILY SSF52172 170 292 5.83E-24 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS04230 d55c65cb8baf8dc07a6ab88be12c3002 300 Gene3D G3DSA:3.40.50.2300 170 292 5.1E-24 T 13-09-2016 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 Gene3D G3DSA:3.40.50.720 1116 1211 8.9E-36 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 Gene3D G3DSA:3.40.50.720 950 1061 8.9E-36 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 PANTHER PTHR11606:SF1 219 566 0.0 T 13-09-2016 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 PANTHER PTHR11606:SF1 50 151 0.0 T 13-09-2016 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 77 1609 0.0 T 13-09-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 PANTHER PTHR11606:SF1 677 1105 0.0 T 13-09-2016 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 SUPERFAMILY SSF51735 953 1055 6.43E-28 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 SUPERFAMILY SSF51735 1091 1222 6.43E-28 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 PANTHER PTHR11606 219 566 0.0 T 13-09-2016 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 SUPERFAMILY SSF53223 762 964 7.0E-24 T 13-09-2016 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 PIRSF PIRSF036761 2 1616 0.0 T 13-09-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 PANTHER PTHR11606:SF1 1130 1375 0.0 T 13-09-2016 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 PANTHER PTHR11606 1130 1375 0.0 T 13-09-2016 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 PANTHER PTHR11606 677 1105 0.0 T 13-09-2016 PMA3_RS15160 7618222f73c314962e65e81a5f47aa43 1633 PANTHER PTHR11606 50 151 0.0 T 13-09-2016 PMA3_RS21900 c53f75313833222f50788e977f79ebe5 287 Pfam PF02811 PHP domain 4 70 1.5E-6 T 13-09-2016 IPR004013 PHP domain GO:0003824 PMA3_RS21900 c53f75313833222f50788e977f79ebe5 287 PANTHER PTHR30007:SF4 1 275 1.0E-79 T 13-09-2016 PMA3_RS21900 c53f75313833222f50788e977f79ebe5 287 PANTHER PTHR30007 1 275 1.0E-79 T 13-09-2016 PMA3_RS21900 c53f75313833222f50788e977f79ebe5 287 SMART SM00481 3 68 2.2E-17 T 13-09-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PMA3_RS21900 c53f75313833222f50788e977f79ebe5 287 Gene3D G3DSA:3.20.20.140 2 86 4.4E-39 T 13-09-2016 PMA3_RS21900 c53f75313833222f50788e977f79ebe5 287 Gene3D G3DSA:3.20.20.140 160 270 4.4E-39 T 13-09-2016 PMA3_RS21900 c53f75313833222f50788e977f79ebe5 287 SUPERFAMILY SSF89550 2 81 1.47E-48 T 13-09-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PMA3_RS21900 c53f75313833222f50788e977f79ebe5 287 SUPERFAMILY SSF89550 168 275 1.47E-48 T 13-09-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 PANTHER PTHR32089:SF39 11 629 1.4E-281 T 13-09-2016 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 Pfam PF02743 Cache domain 37 259 7.6E-36 T 13-09-2016 IPR033479 Double Cache domain 1 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 SUPERFAMILY SSF58104 320 629 3.53E-73 T 13-09-2016 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 SMART SM00304 298 352 4.8E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 SMART SM00304 387 447 3.3 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 PANTHER PTHR32089 11 629 1.4E-281 T 13-09-2016 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 Gene3D G3DSA:3.30.450.20 69 174 4.1E-29 T 13-09-2016 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 SMART SM00283 367 628 5.2E-87 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 Pfam PF00672 HAMP domain 279 349 1.7E-13 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 Gene3D G3DSA:1.10.287.950 381 598 1.0E-54 T 13-09-2016 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 627 5.3E-48 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 523 8.4E-8 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 410 8.4E-8 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 Gene3D G3DSA:3.30.450.20 175 237 4.3E-4 T 13-09-2016 PMA3_RS09690 674c13077832102544fa4325a526f00d 629 SUPERFAMILY SSF103190 92 184 5.49E-15 T 13-09-2016 IPR029151 Periplasmic sensor domain-like PMA3_RS19175 5b137a5e48094b6471670633f9d27576 360 Gene3D G3DSA:3.10.310.10 176 332 5.2E-55 T 13-09-2016 PMA3_RS19175 5b137a5e48094b6471670633f9d27576 360 SUPERFAMILY SSF54506 170 354 3.3E-59 T 13-09-2016 PMA3_RS19175 5b137a5e48094b6471670633f9d27576 360 Gene3D G3DSA:3.10.310.10 2 175 1.2E-76 T 13-09-2016 PMA3_RS19175 5b137a5e48094b6471670633f9d27576 360 Pfam PF04303 PrpF protein 1 353 4.9E-138 T 13-09-2016 IPR007400 PrpF protein PMA3_RS19175 5b137a5e48094b6471670633f9d27576 360 SUPERFAMILY SSF54506 2 167 1.1E-63 T 13-09-2016 PMA3_RS19175 5b137a5e48094b6471670633f9d27576 360 PANTHER PTHR30349 1 121 2.4E-48 T 13-09-2016 PMA3_RS19175 5b137a5e48094b6471670633f9d27576 360 PANTHER PTHR30349:SF39 1 121 2.4E-48 T 13-09-2016 PMA3_RS14685 290b191608d7ff6b297dcb9495f52382 368 PANTHER PTHR22893 8 350 1.3E-94 T 13-09-2016 PMA3_RS14685 290b191608d7ff6b297dcb9495f52382 368 Gene3D G3DSA:3.20.20.70 6 350 1.1E-99 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS14685 290b191608d7ff6b297dcb9495f52382 368 SUPERFAMILY SSF51395 7 354 2.52E-91 T 13-09-2016 PMA3_RS14685 290b191608d7ff6b297dcb9495f52382 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 13 345 7.0E-64 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS17665 ec255bdd57a0324921440c3df1aee65c 1941 ProSitePatterns PS00080 Multicopper oxidases signature 2. 534 545 - T 13-09-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 PMA3_RS17665 ec255bdd57a0324921440c3df1aee65c 1941 SUPERFAMILY SSF49503 462 553 2.48E-15 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17665 ec255bdd57a0324921440c3df1aee65c 1941 SUPERFAMILY SSF49503 1278 1345 1.28E-5 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17665 ec255bdd57a0324921440c3df1aee65c 1941 Gene3D G3DSA:2.60.40.420 459 553 4.7E-11 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17665 ec255bdd57a0324921440c3df1aee65c 1941 Gene3D G3DSA:2.60.40.420 95 119 1.2E-4 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17665 ec255bdd57a0324921440c3df1aee65c 1941 Gene3D G3DSA:2.60.40.420 157 241 1.2E-4 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17665 ec255bdd57a0324921440c3df1aee65c 1941 Gene3D G3DSA:2.60.40.420 1096 1159 7.8E-7 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17665 ec255bdd57a0324921440c3df1aee65c 1941 Gene3D G3DSA:2.60.40.420 1284 1341 7.8E-7 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS27465 87533ef6b03dc5c304df360d9e5d970c 278 Gene3D G3DSA:3.20.20.70 5 264 7.9E-104 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS27465 87533ef6b03dc5c304df360d9e5d970c 278 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 5 265 36.058 T 13-09-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 PMA3_RS27465 87533ef6b03dc5c304df360d9e5d970c 278 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 58 76 - T 13-09-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 PMA3_RS27465 87533ef6b03dc5c304df360d9e5d970c 278 PANTHER PTHR22854:SF2 1 264 2.9E-112 T 13-09-2016 PMA3_RS27465 87533ef6b03dc5c304df360d9e5d970c 278 PANTHER PTHR22854 1 264 2.9E-112 T 13-09-2016 PMA3_RS27465 87533ef6b03dc5c304df360d9e5d970c 278 SUPERFAMILY SSF51366 14 265 1.05E-87 T 13-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PMA3_RS27465 87533ef6b03dc5c304df360d9e5d970c 278 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 262 4.0E-97 T 13-09-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 SMART SM00345 7 66 8.7E-14 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 SUPERFAMILY SSF46785 1 76 7.0E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 7.5E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 SMART SM00866 88 227 2.0E-27 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 3 234 4.3E-96 T 13-09-2016 IPR012770 Trehalose operon transcriptional repressor PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 Pfam PF07702 UTRA domain 90 226 5.6E-32 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 PANTHER PTHR11751:SF347 116 139 2.2E-26 T 13-09-2016 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 PANTHER PTHR11751:SF347 1 68 2.2E-26 T 13-09-2016 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 Gene3D G3DSA:1.10.10.10 2 61 3.0E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 1.7E-7 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 1.7E-7 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 SUPERFAMILY SSF64288 54 233 1.22E-40 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 PANTHER PTHR11751 116 139 2.2E-26 T 13-09-2016 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 PANTHER PTHR11751 1 68 2.2E-26 T 13-09-2016 PMA3_RS24130 f7b9993c499037a27e667a893a9f8666 234 Gene3D G3DSA:3.40.1410.10 62 234 7.7E-47 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PANTHER PTHR22912 1 316 6.7E-162 T 13-09-2016 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PANTHER PTHR22912:SF48 1 316 6.7E-162 T 13-09-2016 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 Gene3D G3DSA:3.50.50.60 119 244 1.1E-32 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 Gene3D G3DSA:3.50.50.60 4 118 9.1E-33 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 302 3.0E-46 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 13-09-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.1E-38 T 13-09-2016 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.1E-38 T 13-09-2016 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.1E-38 T 13-09-2016 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-38 T 13-09-2016 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.1E-38 T 13-09-2016 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 7.4E-76 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 7.4E-76 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 7.4E-76 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 7.4E-76 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 7.4E-76 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 7.4E-76 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 7.4E-76 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 7.4E-76 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 294 313 7.4E-76 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 8.3E-117 T 13-09-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 PMA3_RS19580 dee8455f797bf679aa3b10981ebc00a2 319 SUPERFAMILY SSF51905 2 313 7.87E-53 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS00675 d74a74ad373692473b3cfe1d99fa4082 214 PANTHER PTHR30450:SF1 3 214 3.6E-111 T 13-09-2016 PMA3_RS00675 d74a74ad373692473b3cfe1d99fa4082 214 SUPERFAMILY SSF161098 4 198 7.33E-48 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00675 d74a74ad373692473b3cfe1d99fa4082 214 Gene3D G3DSA:1.10.3720.10 3 213 2.8E-43 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00675 d74a74ad373692473b3cfe1d99fa4082 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 214 2.2E-24 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00675 d74a74ad373692473b3cfe1d99fa4082 214 PANTHER PTHR30450 3 214 3.6E-111 T 13-09-2016 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 13-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Gene3D G3DSA:3.90.740.10 248 467 8.0E-51 T 13-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PANTHER PTHR11946:SF7 630 863 0.0 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PANTHER PTHR11946:SF7 1 206 0.0 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 863 2.3E-295 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 863 21.634 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 SUPERFAMILY SSF47323 674 863 3.74E-28 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Gene3D G3DSA:3.40.50.620 5 228 4.0E-131 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Gene3D G3DSA:3.40.50.620 500 584 4.0E-131 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Gene3D G3DSA:3.40.50.620 630 658 4.0E-131 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Gene3D G3DSA:1.10.730.10 659 801 1.9E-32 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 SUPERFAMILY SSF50677 248 422 1.44E-39 T 13-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PANTHER PTHR11946 248 273 0.0 T 13-09-2016 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PANTHER PTHR11946 294 585 0.0 T 13-09-2016 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 535 557 3.4E-49 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 3.4E-49 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 497 515 3.4E-49 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 568 578 3.4E-49 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 3.4E-49 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 3.4E-49 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 3.4E-49 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PANTHER PTHR11946 630 863 0.0 T 13-09-2016 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PANTHER PTHR11946 1 206 0.0 T 13-09-2016 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Pfam PF08264 Anticodon-binding domain of tRNA 714 827 2.4E-13 T 13-09-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Pfam PF09334 tRNA synthetases class I (M) 38 171 2.2E-20 T 13-09-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 412 2.2E-53 T 13-09-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 SUPERFAMILY SSF52374 4 226 2.25E-145 T 13-09-2016 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 SUPERFAMILY SSF52374 426 680 2.25E-145 T 13-09-2016 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PANTHER PTHR11946:SF7 248 273 0.0 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 PANTHER PTHR11946:SF7 294 585 0.0 T 13-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 427 582 8.5E-8 T 13-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS19665 681495ddf07c44018213d492b7a8b28d 863 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 591 667 1.8E-6 T 13-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS12295 5bcb32c6aa7c063036f84b4416dfb710 517 PANTHER PTHR23501 1 498 2.5E-113 T 13-09-2016 PMA3_RS12295 5bcb32c6aa7c063036f84b4416dfb710 517 Pfam PF07690 Major Facilitator Superfamily 19 405 2.7E-47 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS12295 5bcb32c6aa7c063036f84b4416dfb710 517 Gene3D G3DSA:1.20.1250.20 259 416 3.7E-17 T 13-09-2016 PMA3_RS12295 5bcb32c6aa7c063036f84b4416dfb710 517 Gene3D G3DSA:1.20.1250.20 474 500 3.7E-17 T 13-09-2016 PMA3_RS12295 5bcb32c6aa7c063036f84b4416dfb710 517 Gene3D G3DSA:1.20.1250.20 11 191 2.3E-28 T 13-09-2016 PMA3_RS12295 5bcb32c6aa7c063036f84b4416dfb710 517 PANTHER PTHR23501:SF7 1 498 2.5E-113 T 13-09-2016 PMA3_RS12295 5bcb32c6aa7c063036f84b4416dfb710 517 SUPERFAMILY SSF103473 6 196 2.49E-65 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS12295 5bcb32c6aa7c063036f84b4416dfb710 517 SUPERFAMILY SSF103473 473 501 2.49E-65 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS12295 5bcb32c6aa7c063036f84b4416dfb710 517 SUPERFAMILY SSF103473 244 415 2.49E-65 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 Gene3D G3DSA:3.40.50.1000 366 407 9.1E-43 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 Gene3D G3DSA:3.40.50.1000 520 661 9.1E-43 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 SUPERFAMILY SSF81665 141 195 2.35E-17 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 SUPERFAMILY SSF81665 293 387 2.35E-17 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 SUPERFAMILY SSF81665 642 682 2.35E-17 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 SUPERFAMILY SSF55008 1 57 1.96E-6 T 13-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 Pfam PF00702 haloacid dehalogenase-like hydrolase 392 604 1.1E-38 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 Gene3D G3DSA:2.70.150.10 141 293 3.9E-24 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 164 678 6.0E-77 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 PRINTS PR00941 Cadmium-transporting ATPase signature 277 291 9.1E-10 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 PRINTS PR00941 Cadmium-transporting ATPase signature 176 196 9.1E-10 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 PRINTS PR00941 Cadmium-transporting ATPase signature 258 274 9.1E-10 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 SUPERFAMILY SSF81653 197 292 3.79E-22 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 Pfam PF00122 E1-E2 ATPase 162 384 5.6E-65 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 592 611 5.7E-22 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 616 628 5.7E-22 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 242 256 5.7E-22 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 393 407 5.7E-22 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 549 5.7E-22 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 PANTHER PTHR24093:SF317 1 689 1.0E-247 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 PANTHER PTHR24093 1 689 1.0E-247 T 13-09-2016 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 Gene3D G3DSA:3.40.1110.10 408 519 1.4E-13 T 13-09-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 395 401 - T 13-09-2016 IPR018303 P-type ATPase, phosphorylation site PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 SUPERFAMILY SSF56784 392 411 1.65E-54 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 SUPERFAMILY SSF56784 450 692 1.65E-54 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS06445 21068f7f148670359dc85b8bfb6a9c3e 698 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 141 695 8.7E-177 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 PANTHER PTHR22888:SF2 1 274 1.6E-122 T 13-09-2016 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 276 348 4.7E-11 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 187 235 - T 13-09-2016 IPR001505 Copper centre Cu(A) GO:0005507 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 SUPERFAMILY SSF49503 111 306 6.54E-53 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 121 240 7.0E-37 T 13-09-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 113 2.0E-39 T 13-09-2016 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 PRINTS PR01166 Cytochrome c oxidase subunit II signature 224 241 2.0E-39 T 13-09-2016 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 PRINTS PR01166 Cytochrome c oxidase subunit II signature 162 183 2.0E-39 T 13-09-2016 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 PRINTS PR01166 Cytochrome c oxidase subunit II signature 115 134 2.0E-39 T 13-09-2016 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 PRINTS PR01166 Cytochrome c oxidase subunit II signature 81 93 2.0E-39 T 13-09-2016 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 PRINTS PR01166 Cytochrome c oxidase subunit II signature 186 206 2.0E-39 T 13-09-2016 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 PRINTS PR01166 Cytochrome c oxidase subunit II signature 206 223 2.0E-39 T 13-09-2016 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 Gene3D G3DSA:2.60.40.420 111 287 1.9E-57 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 PANTHER PTHR22888 1 274 1.6E-122 T 13-09-2016 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 SUPERFAMILY SSF46626 262 363 3.4E-21 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 23 104 1.3E-12 T 13-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 Gene3D G3DSA:1.10.760.10 288 372 3.4E-23 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 SUPERFAMILY SSF81464 18 113 9.97E-24 T 13-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 33 251 3.1E-56 T 13-09-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 PMA3_RS00110 f1faceadf817d9984f62c3a9c16764c2 375 Gene3D G3DSA:1.10.287.90 23 110 3.7E-24 T 13-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PMA3_RS23290 307a54a4a3e2e0556980982e8cc9c21c 113 Pfam PF13467 Ribbon-helix-helix domain 37 102 1.3E-17 T 13-09-2016 IPR027373 Ribbon-helix-helix domain PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 PANTHER PTHR30505:SF0 1 575 4.1E-264 T 13-09-2016 PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 Pfam PF02378 Phosphotransferase system, EIIC 246 509 3.3E-18 T 13-09-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 124 212 2.7E-19 T 13-09-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 1.8E-10 T 13-09-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 Gene3D G3DSA:3.40.50.2300 1 103 1.9E-24 T 13-09-2016 PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 Gene3D G3DSA:3.40.50.2300 118 220 1.4E-40 T 13-09-2016 PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 232 565 1.8E-144 T 13-09-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 PANTHER PTHR30505 1 575 4.1E-264 T 13-09-2016 PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 123 206 1.2E-33 T 13-09-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 SUPERFAMILY SSF52794 121 218 2.09E-35 T 13-09-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PMA3_RS25415 db296c5f7002ca4ab84f3dfb1c819d36 579 SUPERFAMILY SSF52794 2 103 1.18E-23 T 13-09-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PMA3_RS01335 7d58a73099a239fc0a956f39b1390a86 319 SUPERFAMILY SSF161098 116 301 9.68E-46 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01335 7d58a73099a239fc0a956f39b1390a86 319 Gene3D G3DSA:1.10.3720.10 114 316 5.7E-52 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01335 7d58a73099a239fc0a956f39b1390a86 319 PANTHER PTHR30614 8 319 3.6E-120 T 13-09-2016 PMA3_RS01335 7d58a73099a239fc0a956f39b1390a86 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 316 1.6E-23 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01335 7d58a73099a239fc0a956f39b1390a86 319 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 116 210 2.9E-27 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS01335 7d58a73099a239fc0a956f39b1390a86 319 PANTHER PTHR30614:SF0 8 319 3.6E-120 T 13-09-2016 PMA3_RS06260 d009196cb5c91745185bf0bfbecf0185 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 2.3E-36 T 13-09-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PMA3_RS06260 d009196cb5c91745185bf0bfbecf0185 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.003 T 13-09-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PMA3_RS06260 d009196cb5c91745185bf0bfbecf0185 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.136 T 13-09-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PMA3_RS06260 d009196cb5c91745185bf0bfbecf0185 78 Gene3D G3DSA:1.10.1200.10 3 77 3.8E-35 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS06260 d009196cb5c91745185bf0bfbecf0185 78 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0075 T 13-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PMA3_RS06260 d009196cb5c91745185bf0bfbecf0185 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 13-09-2016 IPR006162 Phosphopantetheine attachment site PMA3_RS06260 d009196cb5c91745185bf0bfbecf0185 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 4.8E-17 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS06260 d009196cb5c91745185bf0bfbecf0185 78 PANTHER PTHR20863 4 76 6.2E-31 T 13-09-2016 PMA3_RS06260 d009196cb5c91745185bf0bfbecf0185 78 SUPERFAMILY SSF47336 2 77 1.83E-23 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS12970 1159d2f5dd24f58fa033fc6250215f21 298 PANTHER PTHR30126 1 297 4.1E-106 T 13-09-2016 PMA3_RS12970 1159d2f5dd24f58fa033fc6250215f21 298 Gene3D G3DSA:3.40.190.10 183 244 3.2E-5 T 13-09-2016 PMA3_RS12970 1159d2f5dd24f58fa033fc6250215f21 298 Gene3D G3DSA:1.10.10.10 1 85 3.9E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12970 1159d2f5dd24f58fa033fc6250215f21 298 Pfam PF03466 LysR substrate binding domain 89 284 1.2E-29 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS12970 1159d2f5dd24f58fa033fc6250215f21 298 SUPERFAMILY SSF53850 91 287 7.24E-34 T 13-09-2016 PMA3_RS12970 1159d2f5dd24f58fa033fc6250215f21 298 SUPERFAMILY SSF46785 1 110 2.93E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12970 1159d2f5dd24f58fa033fc6250215f21 298 PANTHER PTHR30126:SF12 1 297 4.1E-106 T 13-09-2016 PMA3_RS12970 1159d2f5dd24f58fa033fc6250215f21 298 Gene3D G3DSA:3.40.190.10 91 182 5.2E-15 T 13-09-2016 PMA3_RS12970 1159d2f5dd24f58fa033fc6250215f21 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.9E-13 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS01585 024abae6290b7eb3dfbf342d057d4753 127 Gene3D G3DSA:2.30.30.110 6 127 2.4E-13 T 13-09-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PMA3_RS01585 024abae6290b7eb3dfbf342d057d4753 127 SUPERFAMILY SSF50118 5 127 2.18E-12 T 13-09-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PMA3_RS01585 024abae6290b7eb3dfbf342d057d4753 127 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 8 125 3.4E-21 T 13-09-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 PMA3_RS30270 12ffca948a9d93d0b3fa05fc36487eca 382 Pfam PF02405 Permease MlaE 166 375 1.6E-68 T 13-09-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PMA3_RS30270 12ffca948a9d93d0b3fa05fc36487eca 382 PANTHER PTHR30188 38 382 3.5E-157 T 13-09-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PMA3_RS30270 12ffca948a9d93d0b3fa05fc36487eca 382 PANTHER PTHR30188:SF3 38 382 3.5E-157 T 13-09-2016 PMA3_RS30270 12ffca948a9d93d0b3fa05fc36487eca 382 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 132 378 4.6E-69 T 13-09-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 Gene3D G3DSA:3.30.499.10 402 519 9.4E-64 T 13-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 PANTHER PTHR11670:SF39 306 858 0.0 T 13-09-2016 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 6.9E-41 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 Gene3D G3DSA:3.20.19.10 163 360 1.7E-90 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 PIRSF PIRSF036687 1 859 0.0 T 13-09-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 SUPERFAMILY SSF53732 379 855 9.16E-149 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 382 5.6E-92 T 13-09-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 Gene3D G3DSA:3.30.499.10 684 864 7.3E-53 T 13-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 Gene3D G3DSA:3.40.1060.10 520 682 6.4E-83 T 13-09-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 SUPERFAMILY SSF74778 2 160 1.44E-67 T 13-09-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 PANTHER PTHR11670 306 858 0.0 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 13-09-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.3E-64 T 13-09-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 13-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS15510 f6a6dc228e4cced1bfe3c0160f232a8e 866 SUPERFAMILY SSF52016 164 372 1.02E-67 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 PANTHER PTHR10836 8 349 5.3E-215 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 SUPERFAMILY SSF55347 161 325 4.17E-54 T 13-09-2016 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 PANTHER PTHR10836:SF47 8 349 5.3E-215 T 13-09-2016 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 Gene3D G3DSA:3.40.50.720 6 169 3.1E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 SUPERFAMILY SSF51735 8 175 1.84E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 SMART SM00846 7 161 1.1E-73 T 13-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 Gene3D G3DSA:3.30.360.10 170 326 5.2E-56 T 13-09-2016 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 167 323 2.9E-48 T 13-09-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 280 295 6.5E-24 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 155 173 6.5E-24 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 6.5E-24 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 239 256 6.5E-24 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 182 198 6.5E-24 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 8 336 1.1E-175 T 13-09-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 8 161 4.8E-49 T 13-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS28210 bc49d3056554c2279504ab7c9bd3460f 350 PIRSF PIRSF000149 5 345 3.3E-129 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS20200 f8d4b31d50b2885e78e61d76d6fb0760 244 Pfam PF00975 Thioesterase domain 5 230 2.2E-43 T 13-09-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PMA3_RS20200 f8d4b31d50b2885e78e61d76d6fb0760 244 Gene3D G3DSA:3.40.50.1820 165 232 1.2E-25 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS20200 f8d4b31d50b2885e78e61d76d6fb0760 244 Gene3D G3DSA:3.40.50.1820 3 110 1.2E-25 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS20200 f8d4b31d50b2885e78e61d76d6fb0760 244 SUPERFAMILY SSF53474 3 231 7.25E-45 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS20200 f8d4b31d50b2885e78e61d76d6fb0760 244 PANTHER PTHR11487 2 241 1.5E-84 T 13-09-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 PMA3_RS13530 4e7558d7a209ee8c382aebd63640290f 305 PANTHER PTHR35008:SF4 1 301 3.1E-91 T 13-09-2016 PMA3_RS13530 4e7558d7a209ee8c382aebd63640290f 305 Gene3D G3DSA:1.10.760.10 49 160 1.8E-33 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13530 4e7558d7a209ee8c382aebd63640290f 305 Gene3D G3DSA:1.10.760.10 179 269 1.3E-15 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13530 4e7558d7a209ee8c382aebd63640290f 305 SUPERFAMILY SSF46626 169 290 4.65E-22 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13530 4e7558d7a209ee8c382aebd63640290f 305 PANTHER PTHR35008 1 301 3.1E-91 T 13-09-2016 PMA3_RS13530 4e7558d7a209ee8c382aebd63640290f 305 SUPERFAMILY SSF46626 52 159 4.71E-27 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13530 4e7558d7a209ee8c382aebd63640290f 305 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 179 259 1.1E-10 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 SUPERFAMILY SSF53850 103 312 1.85E-38 T 13-09-2016 PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 SUPERFAMILY SSF46785 13 95 1.12E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 Gene3D G3DSA:3.40.190.10 191 271 1.3E-15 T 13-09-2016 PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 1.4E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 1.4E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.4E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 8.3E-15 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 PANTHER PTHR30126 14 315 1.2E-53 T 13-09-2016 PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 Pfam PF03466 LysR substrate binding domain 102 307 1.1E-35 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 Gene3D G3DSA:3.40.190.10 103 190 2.4E-12 T 13-09-2016 PMA3_RS19305 93b5f9c8709ac5b899ac17a43f689c8c 320 Gene3D G3DSA:1.10.10.10 15 99 3.7E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 Pfam PF00512 His Kinase A (phospho-acceptor) domain 796 863 4.5E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 SUPERFAMILY SSF47384 779 864 9.22E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 Gene3D G3DSA:3.40.50.2300 1032 1154 5.2E-18 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 SMART SM00448 1037 1150 3.8E-9 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 SUPERFAMILY SSF55785 627 749 1.52E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 908 1016 2.0E-18 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PANTHER PTHR24423 792 1154 1.9E-221 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PANTHER PTHR24423 634 766 1.9E-221 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PANTHER PTHR24423 182 201 1.9E-221 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 SUPERFAMILY SSF55874 852 1017 1.3E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 Pfam PF00072 Response regulator receiver domain 1039 1149 1.6E-9 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PANTHER PTHR24423 11 63 1.9E-221 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 Gene3D G3DSA:1.10.287.130 791 859 1.4E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 SUPERFAMILY SSF52172 1036 1154 8.97E-19 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 Gene3D G3DSA:3.30.450.20 627 749 6.3E-14 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 Pfam PF12860 PAS fold 642 756 1.0E-45 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PANTHER PTHR24423:SF439 11 63 1.9E-221 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 SMART SM00387 907 1017 6.5E-26 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PANTHER PTHR24423:SF439 792 1154 1.9E-221 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PANTHER PTHR24423:SF439 634 766 1.9E-221 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 942 956 3.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 977 995 3.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1001 1014 3.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 960 970 3.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 Gene3D G3DSA:3.30.565.10 866 1020 7.0E-38 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 PANTHER PTHR24423:SF439 182 201 1.9E-221 T 13-09-2016 PMA3_RS21030 0f54f3fc612e2e7c29b4b6fcb832c32c 1156 SMART SM00388 796 863 1.2E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12805 9b85bbe055ad91e1271279cb7f1f2203 403 PANTHER PTHR10804:SF99 1 401 3.5E-187 T 13-09-2016 PMA3_RS12805 9b85bbe055ad91e1271279cb7f1f2203 403 SUPERFAMILY SSF55920 158 398 3.27E-61 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS12805 9b85bbe055ad91e1271279cb7f1f2203 403 Pfam PF01321 Creatinase/Prolidase N-terminal domain 27 158 2.2E-15 T 13-09-2016 IPR000587 Creatinase, N-terminal GO:0016787 PMA3_RS12805 9b85bbe055ad91e1271279cb7f1f2203 403 SUPERFAMILY SSF53092 3 156 1.92E-48 T 13-09-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PMA3_RS12805 9b85bbe055ad91e1271279cb7f1f2203 403 PANTHER PTHR10804 1 401 3.5E-187 T 13-09-2016 PMA3_RS12805 9b85bbe055ad91e1271279cb7f1f2203 403 Pfam PF00557 Metallopeptidase family M24 167 382 5.5E-25 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS12805 9b85bbe055ad91e1271279cb7f1f2203 403 Gene3D G3DSA:3.40.350.10 3 156 1.2E-54 T 13-09-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PMA3_RS12805 9b85bbe055ad91e1271279cb7f1f2203 403 Gene3D G3DSA:3.90.230.10 157 398 5.9E-45 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS23770 d724d77c64c3441daf77ece3a1935795 200 Pfam PF00578 AhpC/TSA family 5 139 4.0E-32 T 13-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS23770 d724d77c64c3441daf77ece3a1935795 200 Gene3D G3DSA:3.30.1020.10 157 194 1.9E-14 T 13-09-2016 PMA3_RS23770 d724d77c64c3441daf77ece3a1935795 200 PANTHER PTHR10681 3 193 4.1E-82 T 13-09-2016 PMA3_RS23770 d724d77c64c3441daf77ece3a1935795 200 PIRSF PIRSF000239 1 198 3.4E-57 T 13-09-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PMA3_RS23770 d724d77c64c3441daf77ece3a1935795 200 Gene3D G3DSA:3.40.30.10 2 156 8.5E-54 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS23770 d724d77c64c3441daf77ece3a1935795 200 SUPERFAMILY SSF52833 3 194 1.79E-65 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS23770 d724d77c64c3441daf77ece3a1935795 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 1.5E-13 T 13-09-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 PANTHER PTHR22769 2 187 8.7E-49 T 13-09-2016 PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 Pfam PF14815 NUDIX domain 8 124 4.6E-18 T 13-09-2016 IPR029119 MutY, C-terminal PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 SUPERFAMILY SSF51391 114 312 4.97E-44 T 13-09-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.3E-6 T 13-09-2016 IPR020476 NUDIX hydrolase PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.3E-6 T 13-09-2016 IPR020476 NUDIX hydrolase PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 Gene3D G3DSA:3.20.20.70 122 311 7.2E-37 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 13-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 Pfam PF02581 Thiamine monophosphate synthase/TENI 132 309 1.6E-35 T 13-09-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 125 1.2E-33 T 13-09-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 Gene3D G3DSA:3.90.79.10 3 121 1.2E-36 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 SUPERFAMILY SSF55811 2 126 6.23E-38 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS23340 2c90be4caf98fcb749b65d5226f5631f 314 PANTHER PTHR22769:SF35 2 187 8.7E-49 T 13-09-2016 PMA3_RS28800 e3a09aa88451c74543cf48e16f936bdd 221 Gene3D G3DSA:3.90.850.10 15 220 1.8E-67 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS28800 e3a09aa88451c74543cf48e16f936bdd 221 PANTHER PTHR11820 19 221 6.3E-75 T 13-09-2016 PMA3_RS28800 e3a09aa88451c74543cf48e16f936bdd 221 SUPERFAMILY SSF56529 13 219 4.06E-64 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS28800 e3a09aa88451c74543cf48e16f936bdd 221 PANTHER PTHR11820:SF7 19 221 6.3E-75 T 13-09-2016 PMA3_RS28800 e3a09aa88451c74543cf48e16f936bdd 221 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 19 220 8.3E-50 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS00735 ef78913b54cce6744b37ec9ee3380415 664 ProSitePatterns PS01303 BCCT family of transporters signature. 319 328 - T 13-09-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 PMA3_RS00735 ef78913b54cce6744b37ec9ee3380415 664 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 56 502 9.0E-155 T 13-09-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PMA3_RS00735 ef78913b54cce6744b37ec9ee3380415 664 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 18 503 2.0E-178 T 13-09-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PMA3_RS00735 ef78913b54cce6744b37ec9ee3380415 664 PANTHER PTHR30047 13 664 0.0 T 13-09-2016 PMA3_RS00735 ef78913b54cce6744b37ec9ee3380415 664 PANTHER PTHR30047:SF6 13 664 0.0 T 13-09-2016 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 28 192 5.6E-50 T 13-09-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 PANTHER PTHR30562:SF4 18 489 5.2E-208 T 13-09-2016 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 PRINTS PR00084 Mannitol dehydrogenase signature 222 235 4.2E-20 T 13-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 PRINTS PR00084 Mannitol dehydrogenase signature 183 196 4.2E-20 T 13-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 PRINTS PR00084 Mannitol dehydrogenase signature 29 39 4.2E-20 T 13-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 PRINTS PR00084 Mannitol dehydrogenase signature 252 267 4.2E-20 T 13-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 221 465 3.7E-93 T 13-09-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 SUPERFAMILY SSF48179 287 488 2.52E-58 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 SUPERFAMILY SSF51735 1 286 4.33E-100 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 222 234 - T 13-09-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 Gene3D G3DSA:3.40.50.720 2 285 4.8E-113 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 Gene3D G3DSA:1.10.1040.10 286 489 1.5E-66 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS13375 73a8171565dffe3cee697f51788567ed 490 PANTHER PTHR30562 18 489 5.2E-208 T 13-09-2016 PMA3_RS24830 4b56293404dcfba3aef59eacde74c748 434 Gene3D G3DSA:2.60.120.10 245 399 2.5E-61 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS24830 4b56293404dcfba3aef59eacde74c748 434 Gene3D G3DSA:2.60.120.10 196 221 2.0E-5 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS24830 4b56293404dcfba3aef59eacde74c748 434 Pfam PF04209 homogentisate 1,2-dioxygenase 11 428 7.1E-203 T 13-09-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 PMA3_RS24830 4b56293404dcfba3aef59eacde74c748 434 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 10 428 9.7E-191 T 13-09-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 PMA3_RS24830 4b56293404dcfba3aef59eacde74c748 434 SUPERFAMILY SSF51182 10 433 2.4E-156 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS24830 4b56293404dcfba3aef59eacde74c748 434 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 11 431 70.655 T 13-09-2016 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 PMA3_RS24830 4b56293404dcfba3aef59eacde74c748 434 PANTHER PTHR11056:SF0 1 434 1.6E-236 T 13-09-2016 PMA3_RS24830 4b56293404dcfba3aef59eacde74c748 434 PANTHER PTHR11056 1 434 1.6E-236 T 13-09-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 Gene3D G3DSA:3.30.950.10 107 207 9.5E-27 T 13-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 SUPERFAMILY SSF53790 4 204 1.44E-35 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 7 193 1.2E-42 T 13-09-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 230 351 3.5E-34 T 13-09-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 184 1.8E-14 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 Gene3D G3DSA:3.40.50.150 231 399 1.5E-19 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 SUPERFAMILY SSF53335 216 379 1.91E-28 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 Gene3D G3DSA:3.40.1010.10 3 106 2.7E-20 T 13-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 PANTHER PTHR14741 178 364 2.3E-52 T 13-09-2016 PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 PIRSF PIRSF036428 1 400 5.3E-144 T 13-09-2016 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|KEGG: 00860+2.1.1.132|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00148 PMA3_RS02485 c174dacb6ee0a59f0c5ced84226086b6 403 PANTHER PTHR14741:SF34 178 364 2.3E-52 T 13-09-2016 PMA3_RS03550 90f9e1623bbfa7d70a82030b1505c54d 114 SUPERFAMILY SSF141571 34 90 1.57E-12 T 13-09-2016 PMA3_RS03550 90f9e1623bbfa7d70a82030b1505c54d 114 PIRSF PIRSF029688 1 114 3.0E-58 T 13-09-2016 IPR016933 Pentapeptide repeat-containing uncharacterised conserved protein UCP029688 PMA3_RS03550 90f9e1623bbfa7d70a82030b1505c54d 114 Pfam PF00805 Pentapeptide repeats (8 copies) 54 90 7.8E-9 T 13-09-2016 IPR001646 Pentapeptide repeat PMA3_RS26880 9974d2b6be81685b51db94040d401ac5 569 Pfam PF09909 Uncharacterized protein conserved in bacteria (DUF2138) 27 566 5.7E-243 T 13-09-2016 IPR018671 Protein of unknown function DUF2138 PMA3_RS05765 48236ba038262c61ec015a75a029347c 460 PANTHER PTHR23521 2 418 3.1E-188 T 13-09-2016 PMA3_RS05765 48236ba038262c61ec015a75a029347c 460 Gene3D G3DSA:1.20.1250.20 5 188 1.5E-12 T 13-09-2016 PMA3_RS05765 48236ba038262c61ec015a75a029347c 460 SUPERFAMILY SSF103473 5 373 2.49E-44 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS05765 48236ba038262c61ec015a75a029347c 460 PANTHER PTHR23521:SF2 2 418 3.1E-188 T 13-09-2016 PMA3_RS05765 48236ba038262c61ec015a75a029347c 460 Gene3D G3DSA:1.20.1250.20 201 374 2.7E-23 T 13-09-2016 PMA3_RS05765 48236ba038262c61ec015a75a029347c 460 Pfam PF07690 Major Facilitator Superfamily 290 372 3.5E-9 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS05765 48236ba038262c61ec015a75a029347c 460 Pfam PF07690 Major Facilitator Superfamily 12 282 1.6E-16 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 Gene3D G3DSA:3.20.20.140 234 540 2.4E-27 T 13-09-2016 PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 Pfam PF07969 Amidohydrolase family 79 598 5.5E-71 T 13-09-2016 IPR013108 Amidohydrolase 3 PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 SUPERFAMILY SSF51556 90 150 1.4E-31 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 SUPERFAMILY SSF51556 232 297 1.4E-31 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 SUPERFAMILY SSF51556 324 559 1.4E-31 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 Gene3D G3DSA:2.30.40.10 541 601 3.0E-11 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 PANTHER PTHR22642 32 617 3.3E-129 T 13-09-2016 PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 SUPERFAMILY SSF51338 558 605 1.2E-26 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 SUPERFAMILY SSF51338 26 91 1.2E-26 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 Gene3D G3DSA:2.30.40.10 26 123 1.8E-18 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19460 00d9d0f68ead931d7a3dc3c727c478db 622 PANTHER PTHR22642:SF9 32 617 3.3E-129 T 13-09-2016 PMA3_RS17255 40ba01b497552a38f9b7a3ad003f7452 334 PIRSF PIRSF036979 16 318 4.0E-73 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS17255 40ba01b497552a38f9b7a3ad003f7452 334 SUPERFAMILY SSF52768 4 318 4.5E-80 T 13-09-2016 PMA3_RS17255 40ba01b497552a38f9b7a3ad003f7452 334 Gene3D G3DSA:3.40.800.10 9 318 4.1E-88 T 13-09-2016 IPR023696 Ureohydrolase domain PMA3_RS17255 40ba01b497552a38f9b7a3ad003f7452 334 TIGRFAM TIGR01230 agmatinase: agmatinase 30 312 9.2E-55 T 13-09-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 PMA3_RS17255 40ba01b497552a38f9b7a3ad003f7452 334 PANTHER PTHR11358 1 331 2.2E-72 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS17255 40ba01b497552a38f9b7a3ad003f7452 334 Pfam PF00491 Arginase family 35 310 1.3E-73 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS17255 40ba01b497552a38f9b7a3ad003f7452 334 ProSitePatterns PS01053 Arginase family signature. 240 261 - T 13-09-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 PMA3_RS13070 753e4888459316c603a3503fdae73232 177 Pfam PF07719 Tetratricopeptide repeat 93 126 4.3E-5 T 13-09-2016 IPR013105 Tetratricopeptide repeat 2 PMA3_RS13070 753e4888459316c603a3503fdae73232 177 SMART SM00028 93 126 8.7E-4 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS13070 753e4888459316c603a3503fdae73232 177 SMART SM00028 127 160 110.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS13070 753e4888459316c603a3503fdae73232 177 SUPERFAMILY SSF48452 66 170 2.34E-16 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS13070 753e4888459316c603a3503fdae73232 177 Gene3D G3DSA:1.25.40.10 68 156 8.4E-16 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS05660 bb75151afafc8abd922f094ec1224563 170 Gene3D G3DSA:3.40.50.960 9 161 6.1E-42 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS05660 bb75151afafc8abd922f094ec1224563 170 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 157 6.2E-33 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS05660 bb75151afafc8abd922f094ec1224563 170 SUPERFAMILY SSF52121 12 162 4.06E-43 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS05660 bb75151afafc8abd922f094ec1224563 170 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 160 20.955 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS05660 bb75151afafc8abd922f094ec1224563 170 PANTHER PTHR21058 15 115 8.3E-29 T 13-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 SUPERFAMILY SSF53732 4 645 8.24E-226 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 SUPERFAMILY SSF52016 649 910 6.47E-88 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 Gene3D G3DSA:3.20.19.10 655 911 2.5E-82 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 Pfam PF00330 Aconitase family (aconitate hydratase) 72 581 3.4E-184 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PRINTS PR00415 Aconitase family signature 293 306 1.3E-41 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PRINTS PR00415 Aconitase family signature 279 292 1.3E-41 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PRINTS PR00415 Aconitase family signature 146 159 1.3E-41 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PRINTS PR00415 Aconitase family signature 203 216 1.3E-41 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PRINTS PR00415 Aconitase family signature 372 386 1.3E-41 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PRINTS PR00415 Aconitase family signature 170 178 1.3E-41 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PRINTS PR00415 Aconitase family signature 450 461 1.3E-41 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PRINTS PR00415 Aconitase family signature 217 232 1.3E-41 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PRINTS PR00415 Aconitase family signature 512 525 1.3E-41 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 Gene3D G3DSA:3.30.499.10 438 594 8.0E-63 T 13-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 Gene3D G3DSA:3.30.499.10 369 393 8.0E-63 T 13-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PANTHER PTHR11670:SF1 769 913 0.0 T 13-09-2016 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 ProSitePatterns PS01244 Aconitase family signature 2. 512 525 - T 13-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PANTHER PTHR11670 435 669 0.0 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 911 0.0 T 13-09-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 Pfam PF00694 Aconitase C-terminal domain 710 836 8.0E-49 T 13-09-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PANTHER PTHR11670 769 913 0.0 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PANTHER PTHR11670 8 393 0.0 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PANTHER PTHR11670 685 730 0.0 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PANTHER PTHR11670:SF1 8 393 0.0 T 13-09-2016 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PANTHER PTHR11670:SF1 685 730 0.0 T 13-09-2016 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 Gene3D G3DSA:3.40.1060.10 250 365 2.3E-34 T 13-09-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 Gene3D G3DSA:3.30.499.10 29 249 5.6E-79 T 13-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 ProSitePatterns PS00450 Aconitase family signature 1. 446 462 - T 13-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS08550 9d3843f9d0358d5245a853fa1c408b95 913 PANTHER PTHR11670:SF1 435 669 0.0 T 13-09-2016 PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 SUPERFAMILY SSF56784 3 217 1.24E-57 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 2.5E-8 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.5E-8 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 2.5E-8 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 2.5E-8 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 PANTHER PTHR18901 1 218 9.9E-101 T 13-09-2016 PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 186 2.5E-30 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 Gene3D G3DSA:3.40.50.1000 1 19 4.5E-40 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 Gene3D G3DSA:3.40.50.1000 82 216 4.5E-40 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 79 180 5.5E-11 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 PANTHER PTHR18901:SF24 1 218 9.9E-101 T 13-09-2016 PMA3_RS20995 d8f9e6d49eb13812ef5ecddc3fadf831 223 Gene3D G3DSA:1.10.150.240 20 81 6.2E-5 T 13-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PMA3_RS02195 4e9fad8f37b24e86a3094f7790af452c 195 Gene3D G3DSA:3.40.50.450 4 184 2.9E-70 T 13-09-2016 PMA3_RS02195 4e9fad8f37b24e86a3094f7790af452c 195 PANTHER PTHR31223:SF0 5 194 3.7E-92 T 13-09-2016 PMA3_RS02195 4e9fad8f37b24e86a3094f7790af452c 195 PANTHER PTHR31223 5 194 3.7E-92 T 13-09-2016 PMA3_RS02195 4e9fad8f37b24e86a3094f7790af452c 195 SUPERFAMILY SSF102405 4 180 5.65E-64 T 13-09-2016 PMA3_RS02195 4e9fad8f37b24e86a3094f7790af452c 195 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 179 4.8E-62 T 13-09-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PMA3_RS02195 4e9fad8f37b24e86a3094f7790af452c 195 Pfam PF03641 Possible lysine decarboxylase 48 177 3.3E-41 T 13-09-2016 IPR031100 LOG family PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 Gene3D G3DSA:3.40.190.10 91 170 1.9E-11 T 13-09-2016 PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 69 1.3E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.8E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.8E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.8E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 PANTHER PTHR30537:SF26 1 301 2.1E-82 T 13-09-2016 PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 PANTHER PTHR30537 1 301 2.1E-82 T 13-09-2016 PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 SUPERFAMILY SSF46785 10 88 6.39E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 Gene3D G3DSA:1.10.10.10 9 89 2.7E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 Gene3D G3DSA:3.40.190.10 171 270 3.7E-20 T 13-09-2016 PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 Pfam PF03466 LysR substrate binding domain 94 301 7.5E-35 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS24780 ad957d02b71ac2c4a9bbe97465a272fb 315 SUPERFAMILY SSF53850 94 302 1.63E-35 T 13-09-2016 PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 Gene3D G3DSA:2.30.40.10 18 67 1.2E-12 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 Gene3D G3DSA:3.20.20.140 68 344 1.6E-45 T 13-09-2016 PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 PANTHER PTHR22642 9 396 1.0E-149 T 13-09-2016 PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 SUPERFAMILY SSF51556 60 360 2.12E-87 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 Pfam PF01979 Amidohydrolase family 57 374 3.7E-21 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 PANTHER PTHR22642:SF1 9 396 1.0E-149 T 13-09-2016 PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 43.049 T 13-09-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 SUPERFAMILY SSF51338 1 60 2.14E-28 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 SUPERFAMILY SSF51338 361 396 2.14E-28 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 TIGRFAM TIGR01224 hutI: imidazolonepropionase 21 396 4.5E-149 T 13-09-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS01300 fe4e3ca005799858e4c5dda83a0b5081 407 Gene3D G3DSA:2.30.40.10 345 378 1.5E-7 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS02730 8832e4b8485ca8e1ab2c78006f3f6bfc 427 PANTHER PTHR11986 1 427 2.8E-226 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS02730 8832e4b8485ca8e1ab2c78006f3f6bfc 427 PANTHER PTHR11986:SF5 1 427 2.8E-226 T 13-09-2016 PMA3_RS02730 8832e4b8485ca8e1ab2c78006f3f6bfc 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS02730 8832e4b8485ca8e1ab2c78006f3f6bfc 427 Gene3D G3DSA:3.40.640.10 70 316 2.6E-85 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS02730 8832e4b8485ca8e1ab2c78006f3f6bfc 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 424 5.4E-190 T 13-09-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 PMA3_RS02730 8832e4b8485ca8e1ab2c78006f3f6bfc 427 Pfam PF00202 Aminotransferase class-III 33 395 4.5E-77 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS02730 8832e4b8485ca8e1ab2c78006f3f6bfc 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.173 T 13-09-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 PMA3_RS02730 8832e4b8485ca8e1ab2c78006f3f6bfc 427 SUPERFAMILY SSF53383 2 424 7.12E-134 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS02730 8832e4b8485ca8e1ab2c78006f3f6bfc 427 Gene3D G3DSA:3.90.1150.10 319 425 4.5E-39 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS02730 8832e4b8485ca8e1ab2c78006f3f6bfc 427 Gene3D G3DSA:3.90.1150.10 2 69 4.5E-39 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS09860 943eb8982d52d79721738d657acc627b 232 Gene3D G3DSA:3.90.1680.10 1 224 2.5E-54 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS09860 943eb8982d52d79721738d657acc627b 232 PANTHER PTHR13604 2 226 1.0E-40 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS09860 943eb8982d52d79721738d657acc627b 232 Pfam PF02586 SOS response associated peptidase (SRAP) 1 214 1.6E-40 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS09860 943eb8982d52d79721738d657acc627b 232 SUPERFAMILY SSF143081 2 220 2.35E-54 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS01955 7135e7b5dbbae84a5fba644146e0ce06 174 PANTHER PTHR41535 1 174 9.0E-37 T 13-09-2016 PMA3_RS01955 7135e7b5dbbae84a5fba644146e0ce06 174 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 78 89 - T 13-09-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 PMA3_RS01955 7135e7b5dbbae84a5fba644146e0ce06 174 Pfam PF13975 gag-polyprotein putative aspartyl protease 68 155 5.1E-25 T 13-09-2016 PMA3_RS01955 7135e7b5dbbae84a5fba644146e0ce06 174 PANTHER PTHR41535:SF1 1 174 9.0E-37 T 13-09-2016 PMA3_RS01955 7135e7b5dbbae84a5fba644146e0ce06 174 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 54 170 2.5E-35 T 13-09-2016 IPR011969 Clan AA aspartic peptidase, C-terminal PMA3_RS01955 7135e7b5dbbae84a5fba644146e0ce06 174 SUPERFAMILY SSF50630 59 160 3.87E-20 T 13-09-2016 IPR021109 Aspartic peptidase domain PMA3_RS10915 954a9002b44adca93bd5adbf57cd1a9f 246 SMART SM00448 5 117 3.0E-43 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS10915 954a9002b44adca93bd5adbf57cd1a9f 246 Gene3D G3DSA:3.40.50.2300 5 126 5.6E-42 T 13-09-2016 PMA3_RS10915 954a9002b44adca93bd5adbf57cd1a9f 246 PANTHER PTHR26402 5 236 1.4E-98 T 13-09-2016 PMA3_RS10915 954a9002b44adca93bd5adbf57cd1a9f 246 SUPERFAMILY SSF52172 6 134 1.01E-41 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS10915 954a9002b44adca93bd5adbf57cd1a9f 246 SUPERFAMILY SSF46894 140 236 1.25E-23 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS10915 954a9002b44adca93bd5adbf57cd1a9f 246 SMART SM00862 159 235 5.8E-19 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS10915 954a9002b44adca93bd5adbf57cd1a9f 246 PANTHER PTHR26402:SF528 5 236 1.4E-98 T 13-09-2016 PMA3_RS10915 954a9002b44adca93bd5adbf57cd1a9f 246 Gene3D G3DSA:1.10.10.10 136 237 7.4E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10915 954a9002b44adca93bd5adbf57cd1a9f 246 Pfam PF00072 Response regulator receiver domain 7 118 2.6E-31 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS10915 954a9002b44adca93bd5adbf57cd1a9f 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 235 1.6E-20 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS23040 0e4af7104da7d6279bad34dbca46ba3a 393 PANTHER PTHR11601:SF40 8 392 4.8E-93 T 13-09-2016 PMA3_RS23040 0e4af7104da7d6279bad34dbca46ba3a 393 Gene3D G3DSA:3.40.640.10 46 278 1.4E-45 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS23040 0e4af7104da7d6279bad34dbca46ba3a 393 Gene3D G3DSA:3.90.1150.10 279 392 2.4E-6 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS23040 0e4af7104da7d6279bad34dbca46ba3a 393 PANTHER PTHR11601 8 392 4.8E-93 T 13-09-2016 PMA3_RS23040 0e4af7104da7d6279bad34dbca46ba3a 393 Pfam PF00266 Aminotransferase class-V 45 382 3.6E-27 T 13-09-2016 IPR000192 Aminotransferase class V domain PMA3_RS23040 0e4af7104da7d6279bad34dbca46ba3a 393 SUPERFAMILY SSF53383 18 392 5.38E-65 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 Gene3D G3DSA:3.30.470.30 243 372 5.7E-30 T 13-09-2016 PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 Gene3D G3DSA:2.40.50.140 434 560 6.2E-36 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 560 4.7E-212 T 13-09-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 SUPERFAMILY SSF56091 208 429 2.16E-50 T 13-09-2016 PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 238 246 - T 13-09-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 Pfam PF04675 DNA ligase N terminus 3 161 1.3E-17 T 13-09-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 Gene3D G3DSA:3.30.1490.70 207 242 7.0E-14 T 13-09-2016 PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 Gene3D G3DSA:3.30.1490.70 384 429 7.0E-14 T 13-09-2016 PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 Pfam PF01068 ATP dependent DNA ligase domain 218 429 1.8E-21 T 13-09-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 PANTHER PTHR10459 140 559 1.0E-62 T 13-09-2016 PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 Pfam PF04679 ATP dependent DNA ligase C terminal region 450 545 6.1E-10 T 13-09-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 SUPERFAMILY SSF50249 434 560 2.74E-29 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS05185 2d5dfcdaac0a29b4af5a046e1fe736f0 561 PANTHER PTHR10459:SF10 140 559 1.0E-62 T 13-09-2016 PMA3_RS19090 d09efaa198cfb77cefd8e9ea2a1696fd 447 PIRSF PIRSF002808 2 435 1.4E-76 T 13-09-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS19090 d09efaa198cfb77cefd8e9ea2a1696fd 447 PANTHER PTHR11662:SF141 13 430 1.2E-138 T 13-09-2016 PMA3_RS19090 d09efaa198cfb77cefd8e9ea2a1696fd 447 SUPERFAMILY SSF103473 15 429 4.19E-57 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS19090 d09efaa198cfb77cefd8e9ea2a1696fd 447 PANTHER PTHR11662 13 430 1.2E-138 T 13-09-2016 PMA3_RS19090 d09efaa198cfb77cefd8e9ea2a1696fd 447 Gene3D G3DSA:1.20.1250.20 234 429 1.8E-28 T 13-09-2016 PMA3_RS19090 d09efaa198cfb77cefd8e9ea2a1696fd 447 Gene3D G3DSA:1.20.1250.20 17 214 1.5E-40 T 13-09-2016 PMA3_RS19090 d09efaa198cfb77cefd8e9ea2a1696fd 447 Pfam PF07690 Major Facilitator Superfamily 28 390 8.0E-37 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS02140 ec0749cf9d0365c2c73fb39f333df9d2 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 5.5E-27 T 13-09-2016 IPR020069 Ribosomal protein L9, C-terminal PMA3_RS02140 ec0749cf9d0365c2c73fb39f333df9d2 148 SUPERFAMILY SSF55658 1 56 3.31E-17 T 13-09-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PMA3_RS02140 ec0749cf9d0365c2c73fb39f333df9d2 148 PANTHER PTHR21368 1 147 1.3E-49 T 13-09-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02140 ec0749cf9d0365c2c73fb39f333df9d2 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-09-2016 IPR020070 Ribosomal protein L9, N-terminal PMA3_RS02140 ec0749cf9d0365c2c73fb39f333df9d2 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.7E-19 T 13-09-2016 IPR020070 Ribosomal protein L9, N-terminal PMA3_RS02140 ec0749cf9d0365c2c73fb39f333df9d2 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 7.2E-48 T 13-09-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02140 ec0749cf9d0365c2c73fb39f333df9d2 148 Gene3D G3DSA:3.10.430.100 62 147 5.4E-29 T 13-09-2016 IPR020069 Ribosomal protein L9, C-terminal PMA3_RS02140 ec0749cf9d0365c2c73fb39f333df9d2 148 SUPERFAMILY SSF55653 61 147 2.35E-25 T 13-09-2016 IPR020069 Ribosomal protein L9, C-terminal PMA3_RS02140 ec0749cf9d0365c2c73fb39f333df9d2 148 Gene3D G3DSA:3.40.5.10 1 52 2.6E-23 T 13-09-2016 IPR020070 Ribosomal protein L9, N-terminal PMA3_RS02140 ec0749cf9d0365c2c73fb39f333df9d2 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.059 T 13-09-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 370 393 - T 13-09-2016 IPR020595 MnmG-related, conserved site PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 Gene3D G3DSA:3.50.50.60 7 234 7.3E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 275 289 - T 13-09-2016 IPR020595 MnmG-related, conserved site PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 PANTHER PTHR11806:SF0 2 627 0.0 T 13-09-2016 PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 SUPERFAMILY SSF51905 97 261 5.52E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 SUPERFAMILY SSF51905 7 66 5.52E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.138 T 13-09-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.4E-275 T 13-09-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 SMART SM01228 546 617 1.6E-42 T 13-09-2016 PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 Pfam PF01134 Glucose inhibited division protein A 8 401 1.7E-165 T 13-09-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 PANTHER PTHR11806 2 627 0.0 T 13-09-2016 PMA3_RS30060 49069a48d5417a2f952a5a8e52394bf0 632 Pfam PF13932 GidA associated domain 404 616 5.7E-72 T 13-09-2016 IPR026904 GidA associated domain 3 PMA3_RS17465 36edf30ad7d3dc3bb245f5b8f308c2aa 289 PANTHER PTHR21631:SF19 10 289 3.0E-146 T 13-09-2016 PMA3_RS17465 36edf30ad7d3dc3bb245f5b8f308c2aa 289 Gene3D G3DSA:3.20.20.60 6 254 3.5E-60 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS17465 36edf30ad7d3dc3bb245f5b8f308c2aa 289 PANTHER PTHR21631 10 289 3.0E-146 T 13-09-2016 PMA3_RS17465 36edf30ad7d3dc3bb245f5b8f308c2aa 289 SUPERFAMILY SSF51621 7 258 3.72E-66 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS17465 36edf30ad7d3dc3bb245f5b8f308c2aa 289 Hamap MF_01299 Oxaloacetate decarboxylase. 4 289 44.675 T 13-09-2016 IPR023687 Oxaloacetate decarboxylase, bacterial GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PMA3_RS17465 36edf30ad7d3dc3bb245f5b8f308c2aa 289 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 249 2.2E-44 T 13-09-2016 PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 Gene3D G3DSA:3.40.50.300 283 498 9.2E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 Gene3D G3DSA:3.40.50.300 6 242 1.5E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 PANTHER PTHR24220 17 389 5.6E-155 T 13-09-2016 PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 PANTHER PTHR24220:SF516 17 389 5.6E-155 T 13-09-2016 PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 SUPERFAMILY SSF52540 16 232 3.03E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 SUPERFAMILY SSF52540 281 494 6.13E-42 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 SMART SM00382 40 228 6.5E-6 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 SMART SM00382 289 484 6.1E-4 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 Pfam PF00005 ABC transporter 282 435 1.2E-18 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS06700 7da77198c4adc4951eb7f45f6f7aa9c6 514 Pfam PF00005 ABC transporter 31 180 2.1E-27 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS15360 345eb42d5840e5fc3418c73e12282ef0 297 Gene3D G3DSA:1.10.10.10 1 86 5.8E-10 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15360 345eb42d5840e5fc3418c73e12282ef0 297 SUPERFAMILY SSF46785 1 110 8.16E-9 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15360 345eb42d5840e5fc3418c73e12282ef0 297 Pfam PF03466 LysR substrate binding domain 91 291 2.1E-30 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS15360 345eb42d5840e5fc3418c73e12282ef0 297 Gene3D G3DSA:3.40.190.10 188 262 3.9E-10 T 13-09-2016 PMA3_RS15360 345eb42d5840e5fc3418c73e12282ef0 297 Gene3D G3DSA:3.40.190.10 92 187 3.5E-14 T 13-09-2016 PMA3_RS15360 345eb42d5840e5fc3418c73e12282ef0 297 PANTHER PTHR30427 1 297 2.5E-57 T 13-09-2016 PMA3_RS15360 345eb42d5840e5fc3418c73e12282ef0 297 SUPERFAMILY SSF53850 91 295 6.33E-31 T 13-09-2016 PMA3_RS06715 5a2b6c4d1d3abad77a07fd79562fad81 332 PANTHER PTHR16222:SF12 1 320 7.2E-40 T 13-09-2016 PMA3_RS06715 5a2b6c4d1d3abad77a07fd79562fad81 332 PANTHER PTHR16222 1 320 7.2E-40 T 13-09-2016 PMA3_RS06715 5a2b6c4d1d3abad77a07fd79562fad81 332 SUPERFAMILY SSF101478 2 331 1.07E-63 T 13-09-2016 IPR005502 ADP-ribosylation/Crystallin J1 PMA3_RS06715 5a2b6c4d1d3abad77a07fd79562fad81 332 Pfam PF03747 ADP-ribosylglycohydrolase 9 306 2.2E-52 T 13-09-2016 IPR005502 ADP-ribosylation/Crystallin J1 PMA3_RS11525 0d006cb098ed82d0ea37fdb9e41cd38c 172 Gene3D G3DSA:2.40.50.230 20 83 1.0E-10 T 13-09-2016 IPR006531 Gp5 N-terminal PMA3_RS11525 0d006cb098ed82d0ea37fdb9e41cd38c 172 SUPERFAMILY SSF69255 8 84 5.49E-17 T 13-09-2016 PMA3_RS10800 8d3fb4f0e9edfd708433c8ab66e9a9e7 136 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 133 5.3E-28 T 13-09-2016 IPR019587 Polyketide cyclase/dehydrase PMA3_RS10800 8d3fb4f0e9edfd708433c8ab66e9a9e7 136 Gene3D G3DSA:3.30.530.20 2 132 3.8E-43 T 13-09-2016 IPR023393 START-like domain PMA3_RS10800 8d3fb4f0e9edfd708433c8ab66e9a9e7 136 PANTHER PTHR39332:SF2 8 131 1.4E-21 T 13-09-2016 PMA3_RS10800 8d3fb4f0e9edfd708433c8ab66e9a9e7 136 PANTHER PTHR39332 8 131 1.4E-21 T 13-09-2016 PMA3_RS10800 8d3fb4f0e9edfd708433c8ab66e9a9e7 136 SUPERFAMILY SSF55961 1 132 7.4E-36 T 13-09-2016 PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 Gene3D G3DSA:3.80.30.20 141 381 3.5E-70 T 13-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 Pfam PF00919 Uncharacterized protein family UPF0004 11 102 6.1E-21 T 13-09-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 PANTHER PTHR11918 1 445 1.5E-240 T 13-09-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 PANTHER PTHR11918:SF57 1 445 1.5E-240 T 13-09-2016 PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 442 6.8E-101 T 13-09-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 10 444 60.988 T 13-09-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 11 441 2.9E-173 T 13-09-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 Pfam PF04055 Radical SAM superfamily 149 326 3.9E-29 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 Gene3D G3DSA:2.40.50.140 384 444 2.7E-25 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 SUPERFAMILY SSF102114 112 374 2.09E-52 T 13-09-2016 PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 13-09-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PMA3_RS05070 a48afaf0f1874df9a80ec06660872810 445 SMART SM00729 143 369 4.2E-51 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 Gene3D G3DSA:3.40.1410.10 60 224 7.6E-34 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 SMART SM00345 5 62 4.8E-14 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 SUPERFAMILY SSF64288 50 224 2.04E-35 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 Pfam PF07702 UTRA domain 84 220 8.3E-27 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 SUPERFAMILY SSF46785 2 77 8.4E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 PANTHER PTHR11751 112 135 3.7E-28 T 13-09-2016 PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 PANTHER PTHR11751 2 65 3.7E-28 T 13-09-2016 PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 PANTHER PTHR11751:SF292 112 135 3.7E-28 T 13-09-2016 PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 PANTHER PTHR11751:SF292 2 65 3.7E-28 T 13-09-2016 PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 1 223 1.3E-50 T 13-09-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 SMART SM00866 83 220 9.7E-21 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 62 1.4E-15 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 Gene3D G3DSA:1.10.10.10 2 59 3.1E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 22 36 3.5E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS21455 293ab28fab457b90d1d260f26a25d769 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 52 3.5E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 PANTHER PTHR11451:SF31 1 636 0.0 T 13-09-2016 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Gene3D G3DSA:3.30.930.10 241 528 6.6E-124 T 13-09-2016 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 7.2E-53 T 13-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 7.2E-53 T 13-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 7.2E-53 T 13-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 7.2E-53 T 13-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 7.2E-53 T 13-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Pfam PF03129 Anticodon binding domain 540 628 2.2E-21 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 9.2E-225 T 13-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Gene3D G3DSA:3.40.50.800 530 633 8.1E-33 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 528 3.1E-44 T 13-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Gene3D G3DSA:3.10.20.30 1 64 7.4E-23 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 218 1.6E-13 T 13-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 SUPERFAMILY SSF55681 242 525 8.23E-103 T 13-09-2016 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 SUPERFAMILY SSF81271 3 61 1.11E-15 T 13-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 SUPERFAMILY SSF52954 528 632 3.62E-30 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Gene3D G3DSA:3.30.54.20 130 186 2.2E-18 T 13-09-2016 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Gene3D G3DSA:3.30.980.10 187 223 2.4E-40 T 13-09-2016 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Gene3D G3DSA:3.30.980.10 65 129 2.4E-40 T 13-09-2016 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Pfam PF02824 TGS domain 4 61 3.0E-10 T 13-09-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 SMART SM00863 169 218 3.6E-20 T 13-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.13 T 13-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 SUPERFAMILY SSF55186 63 240 2.49E-63 T 13-09-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PMA3_RS09355 5f01d605f17beeaa90dc9bcde147fdd6 640 PANTHER PTHR11451 1 636 0.0 T 13-09-2016 PMA3_RS28060 b190c7752549622f35a871536cc64f45 295 Pfam PF05853 beta-keto acid cleavage enzyme 5 291 8.7E-99 T 13-09-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 PMA3_RS28060 b190c7752549622f35a871536cc64f45 295 PANTHER PTHR37418:SF2 107 294 2.2E-148 T 13-09-2016 PMA3_RS28060 b190c7752549622f35a871536cc64f45 295 PANTHER PTHR37418 107 294 2.2E-148 T 13-09-2016 PMA3_RS28060 b190c7752549622f35a871536cc64f45 295 PANTHER PTHR37418:SF2 2 88 2.2E-148 T 13-09-2016 PMA3_RS28060 b190c7752549622f35a871536cc64f45 295 PANTHER PTHR37418 2 88 2.2E-148 T 13-09-2016 PMA3_RS28060 b190c7752549622f35a871536cc64f45 295 Gene3D G3DSA:3.20.20.70 3 292 1.3E-114 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS24125 82c4d677eeeadc0aa3d4c734de7ba37e 480 PANTHER PTHR30175:SF4 1 465 2.6E-194 T 13-09-2016 PMA3_RS24125 82c4d677eeeadc0aa3d4c734de7ba37e 480 SUPERFAMILY SSF55604 8 84 1.57E-17 T 13-09-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PMA3_RS24125 82c4d677eeeadc0aa3d4c734de7ba37e 480 Gene3D G3DSA:3.30.1360.60 5 84 8.2E-22 T 13-09-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PMA3_RS24125 82c4d677eeeadc0aa3d4c734de7ba37e 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 13-09-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PMA3_RS24125 82c4d677eeeadc0aa3d4c734de7ba37e 480 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 469 4.6E-214 T 13-09-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 PMA3_RS24125 82c4d677eeeadc0aa3d4c734de7ba37e 480 Pfam PF00367 phosphotransferase system, EIIB 11 43 5.0E-12 T 13-09-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PMA3_RS24125 82c4d677eeeadc0aa3d4c734de7ba37e 480 PANTHER PTHR30175 1 465 2.6E-194 T 13-09-2016 PMA3_RS24125 82c4d677eeeadc0aa3d4c734de7ba37e 480 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 113 3.6E-13 T 13-09-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PMA3_RS24125 82c4d677eeeadc0aa3d4c734de7ba37e 480 Pfam PF02378 Phosphotransferase system, EIIC 112 412 6.8E-45 T 13-09-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 Gene3D G3DSA:3.65.10.10 531 727 4.5E-55 T 13-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 Pfam PF02153 Prephenate dehydrogenase 17 273 5.6E-73 T 13-09-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 ProSitePatterns PS00104 EPSP synthase signature 1. 388 402 - T 13-09-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 PANTHER PTHR21090:SF5 306 734 2.8E-181 T 13-09-2016 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 306 719 7.2E-117 T 13-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 SUPERFAMILY SSF55205 304 727 2.88E-131 T 13-09-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 SUPERFAMILY SSF51735 4 171 6.33E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 309 728 33.414 T 13-09-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 SUPERFAMILY SSF48179 177 283 2.04E-34 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 313 726 2.6E-127 T 13-09-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 Gene3D G3DSA:3.40.50.720 4 181 1.3E-37 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 ProSitePatterns PS00885 EPSP synthase signature 2. 640 658 - T 13-09-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 Gene3D G3DSA:3.65.10.10 321 530 4.5E-62 T 13-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PMA3_RS20955 340e1da347edfd08f579de50bebf0280 735 PANTHER PTHR21090 306 734 2.8E-181 T 13-09-2016 PMA3_RS16955 6e2b293fa9a254917db9fbd2f2320aca 375 Gene3D G3DSA:3.40.50.720 4 164 6.1E-15 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS16955 6e2b293fa9a254917db9fbd2f2320aca 375 PANTHER PTHR12286:SF6 1 225 1.2E-17 T 13-09-2016 PMA3_RS16955 6e2b293fa9a254917db9fbd2f2320aca 375 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 6 132 7.5E-7 T 13-09-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 PMA3_RS16955 6e2b293fa9a254917db9fbd2f2320aca 375 SUPERFAMILY SSF51735 2 141 1.26E-12 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS16955 6e2b293fa9a254917db9fbd2f2320aca 375 PANTHER PTHR12286 1 225 1.2E-17 T 13-09-2016 PMA3_RS19590 98f3201d59a427ab4cf4d8221eedba16 235 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 4.3E-41 T 13-09-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 PMA3_RS19590 98f3201d59a427ab4cf4d8221eedba16 235 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 235 45.661 T 13-09-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic PMA3_RS19590 98f3201d59a427ab4cf4d8221eedba16 235 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 15 85 1.6E-19 T 13-09-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 PMA3_RS19590 98f3201d59a427ab4cf4d8221eedba16 235 SUPERFAMILY SSF55729 79 233 8.38E-26 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19590 98f3201d59a427ab4cf4d8221eedba16 235 Gene3D G3DSA:3.40.630.30 88 210 4.7E-7 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19590 98f3201d59a427ab4cf4d8221eedba16 235 PIRSF PIRSF037208 1 235 6.2E-97 T 13-09-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic PMA3_RS19590 98f3201d59a427ab4cf4d8221eedba16 235 PANTHER PTHR21367 12 232 3.9E-79 T 13-09-2016 IPR030700 Arginine-tRNA-protein transferase PMA3_RS19585 71efe40c8025942bffbbe04b69a460a0 226 PANTHER PTHR30098 1 219 3.3E-81 T 13-09-2016 PMA3_RS19585 71efe40c8025942bffbbe04b69a460a0 226 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 204 1.2E-77 T 13-09-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PMA3_RS19585 71efe40c8025942bffbbe04b69a460a0 226 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 217 7.0E-66 T 13-09-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PMA3_RS19585 71efe40c8025942bffbbe04b69a460a0 226 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 226 103.789 T 13-09-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PMA3_RS19585 71efe40c8025942bffbbe04b69a460a0 226 PANTHER PTHR30098:SF2 1 219 3.3E-81 T 13-09-2016 PMA3_RS19585 71efe40c8025942bffbbe04b69a460a0 226 SUPERFAMILY SSF55729 2 223 9.53E-96 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS14815 019a9825795ee8af54386f8899f2b8ce 295 PANTHER PTHR10587 46 184 2.0E-19 T 13-09-2016 PMA3_RS14815 019a9825795ee8af54386f8899f2b8ce 295 Gene3D G3DSA:3.20.20.370 4 276 3.4E-66 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS14815 019a9825795ee8af54386f8899f2b8ce 295 Pfam PF01522 Polysaccharide deacetylase 23 153 1.1E-16 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS14815 019a9825795ee8af54386f8899f2b8ce 295 SUPERFAMILY SSF88713 5 275 8.45E-58 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS11410 3a66d933e2a19f46271ab8a5eb7a1e7c 442 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 111 129 0.0033 T 13-09-2016 IPR006530 YD repeat PMA3_RS11410 3a66d933e2a19f46271ab8a5eb7a1e7c 442 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 256 331 2.1E-28 T 13-09-2016 IPR022385 Rhs repeat-associated core GO:0097264 PMA3_RS11410 3a66d933e2a19f46271ab8a5eb7a1e7c 442 SUPERFAMILY SSF54060 289 422 5.06E-28 T 13-09-2016 PMA3_RS11410 3a66d933e2a19f46271ab8a5eb7a1e7c 442 PRINTS PR00394 RHS protein signature 300 319 1.4E-15 T 13-09-2016 IPR001826 RHS protein PMA3_RS11410 3a66d933e2a19f46271ab8a5eb7a1e7c 442 PRINTS PR00394 RHS protein signature 223 243 1.4E-15 T 13-09-2016 IPR001826 RHS protein PMA3_RS11410 3a66d933e2a19f46271ab8a5eb7a1e7c 442 PRINTS PR00394 RHS protein signature 277 297 1.4E-15 T 13-09-2016 IPR001826 RHS protein PMA3_RS11410 3a66d933e2a19f46271ab8a5eb7a1e7c 442 Gene3D G3DSA:3.90.540.10 335 422 8.2E-4 T 13-09-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 PMA3_RS11410 3a66d933e2a19f46271ab8a5eb7a1e7c 442 Pfam PF03527 RHS protein 230 264 1.4E-18 T 13-09-2016 IPR001826 RHS protein PMA3_RS11410 3a66d933e2a19f46271ab8a5eb7a1e7c 442 PANTHER PTHR11219 40 332 3.5E-75 T 13-09-2016 PMA3_RS11410 3a66d933e2a19f46271ab8a5eb7a1e7c 442 PANTHER PTHR11219:SF49 40 332 3.5E-75 T 13-09-2016 PMA3_RS07780 d06c6c16783b8e0f8c941483cec2b057 310 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 306 48.074 T 13-09-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 PMA3_RS07780 d06c6c16783b8e0f8c941483cec2b057 310 PANTHER PTHR30606 1 309 1.4E-166 T 13-09-2016 PMA3_RS07780 d06c6c16783b8e0f8c941483cec2b057 310 PANTHER PTHR30606:SF5 1 309 1.4E-166 T 13-09-2016 PMA3_RS07780 d06c6c16783b8e0f8c941483cec2b057 310 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 4 306 3.5E-132 T 13-09-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 PMA3_RS07780 d06c6c16783b8e0f8c941483cec2b057 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 296 2.6E-82 T 13-09-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PMA3_RS07780 d06c6c16783b8e0f8c941483cec2b057 310 PIRSF PIRSF026649 1 306 2.5E-100 T 13-09-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PMA3_RS01095 bb679d82df6edc5660b688af55337a36 256 Pfam PF00977 Histidine biosynthesis protein 6 240 5.8E-92 T 13-09-2016 IPR006062 Histidine biosynthesis GO:0000105 PMA3_RS01095 bb679d82df6edc5660b688af55337a36 256 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 7.3E-114 T 13-09-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 PMA3_RS01095 bb679d82df6edc5660b688af55337a36 256 PANTHER PTHR21235:SF2 3 256 6.3E-126 T 13-09-2016 PMA3_RS01095 bb679d82df6edc5660b688af55337a36 256 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 48.649 T 13-09-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 PMA3_RS01095 bb679d82df6edc5660b688af55337a36 256 SUPERFAMILY SSF51366 3 256 3.69E-84 T 13-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PMA3_RS01095 bb679d82df6edc5660b688af55337a36 256 PANTHER PTHR21235 3 256 6.3E-126 T 13-09-2016 PMA3_RS01095 bb679d82df6edc5660b688af55337a36 256 Gene3D G3DSA:3.20.20.70 5 256 4.4E-109 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS29050 0f3a140af68fc507ed9dcfdeea0556e2 105 PANTHER PTHR34981:SF1 3 103 6.3E-25 T 13-09-2016 PMA3_RS29050 0f3a140af68fc507ed9dcfdeea0556e2 105 SUPERFAMILY SSF102829 7 76 1.7E-21 T 13-09-2016 IPR007838 Cell division protein ZapA-like PMA3_RS29050 0f3a140af68fc507ed9dcfdeea0556e2 105 PANTHER PTHR34981 3 103 6.3E-25 T 13-09-2016 PMA3_RS29050 0f3a140af68fc507ed9dcfdeea0556e2 105 Pfam PF05164 Cell division protein ZapA 7 88 1.2E-21 T 13-09-2016 IPR007838 Cell division protein ZapA-like PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.4E-39 T 13-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.4E-39 T 13-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.4E-39 T 13-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.4E-39 T 13-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 PANTHER PTHR12220 1 137 4.7E-72 T 13-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.93 T 13-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 13-09-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 Gene3D G3DSA:3.90.1170.10 23 134 1.2E-51 T 13-09-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.6E-59 T 13-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 SUPERFAMILY SSF54686 1 134 4.32E-52 T 13-09-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 13-09-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27230 4943ba59a7c44c4292e82d9654bdac08 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.4E-47 T 13-09-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 1.0E-60 T 13-09-2016 PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 SUPERFAMILY SSF51735 1 259 1.42E-77 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.4E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.4E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.4E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PANTHER PTHR24322 165 196 8.6E-45 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PANTHER PTHR24322 12 149 8.6E-45 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 5.4E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.4E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.4E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 5.4E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 5.4E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 5.4E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS20210 e65544711d6b8cf90df63b5dee2c313c 266 Gene3D G3DSA:3.40.50.720 3 258 4.4E-83 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 Gene3D G3DSA:3.20.20.10 36 266 1.2E-82 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PANTHER PTHR11482 1 414 1.5E-176 T 13-09-2016 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 SUPERFAMILY SSF50621 254 411 3.77E-54 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 Gene3D G3DSA:2.40.37.10 267 412 1.9E-50 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 SUPERFAMILY SSF51419 26 282 3.53E-79 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 281 4.2E-75 T 13-09-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PANTHER PTHR11482:SF5 1 414 1.5E-176 T 13-09-2016 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 410 1.1E-158 T 13-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 411 42.487 T 13-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 13-09-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 285 388 1.4E-19 T 13-09-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 5.3E-30 T 13-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 5.3E-30 T 13-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 5.3E-30 T 13-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 5.3E-30 T 13-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 2.1E-27 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 2.1E-27 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 2.1E-27 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 2.1E-27 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS29285 53e3b3df749ce1f97d44a040b4e3cfb8 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 2.1E-27 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS08585 d78fce9821026e4fef8c7b884d9ddc37 642 SUPERFAMILY SSF48435 26 475 9.94E-131 T 13-09-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 PMA3_RS08585 d78fce9821026e4fef8c7b884d9ddc37 642 SUPERFAMILY SSF53955 477 636 2.42E-46 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS08585 d78fce9821026e4fef8c7b884d9ddc37 642 Gene3D G3DSA:1.10.530.10 473 634 3.9E-50 T 13-09-2016 PMA3_RS08585 d78fce9821026e4fef8c7b884d9ddc37 642 PANTHER PTHR21666:SF184 461 641 7.4E-48 T 13-09-2016 PMA3_RS08585 d78fce9821026e4fef8c7b884d9ddc37 642 Gene3D G3DSA:1.10.1240.20 403 470 6.5E-19 T 13-09-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PMA3_RS08585 d78fce9821026e4fef8c7b884d9ddc37 642 PANTHER PTHR21666 461 641 7.4E-48 T 13-09-2016 PMA3_RS08585 d78fce9821026e4fef8c7b884d9ddc37 642 Pfam PF01464 Transglycosylase SLT domain 486 594 3.2E-29 T 13-09-2016 IPR008258 Transglycosylase SLT domain 1 PMA3_RS08585 d78fce9821026e4fef8c7b884d9ddc37 642 Pfam PF14718 Soluble lytic murein transglycosylase L domain 404 470 2.5E-19 T 13-09-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PMA3_RS08585 d78fce9821026e4fef8c7b884d9ddc37 642 Gene3D G3DSA:1.25.20.10 27 383 1.7E-103 T 13-09-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 PMA3_RS05410 906e6bd756f8ec029cd4fd2808f0d74e 188 PANTHER PTHR33711 3 188 6.9E-65 T 13-09-2016 PMA3_RS05410 906e6bd756f8ec029cd4fd2808f0d74e 188 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 39 67 - T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS05410 906e6bd756f8ec029cd4fd2808f0d74e 188 SUPERFAMILY SSF49482 3 187 3.66E-52 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS05410 906e6bd756f8ec029cd4fd2808f0d74e 188 Pfam PF00775 Dioxygenase 12 163 3.9E-22 T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS05410 906e6bd756f8ec029cd4fd2808f0d74e 188 Gene3D G3DSA:2.60.130.10 3 188 4.3E-61 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS05410 906e6bd756f8ec029cd4fd2808f0d74e 188 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 6 188 3.0E-64 T 13-09-2016 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 PMA3_RS05410 906e6bd756f8ec029cd4fd2808f0d74e 188 PANTHER PTHR33711:SF2 3 188 6.9E-65 T 13-09-2016 PMA3_RS01115 da0675379e00d0ee53c1ad2e99457c60 263 PANTHER PTHR30105 16 257 8.1E-78 T 13-09-2016 PMA3_RS01115 da0675379e00d0ee53c1ad2e99457c60 263 SUPERFAMILY SSF88713 29 239 6.35E-66 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS01115 da0675379e00d0ee53c1ad2e99457c60 263 Gene3D G3DSA:3.20.20.370 18 245 2.9E-86 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS01115 da0675379e00d0ee53c1ad2e99457c60 263 Pfam PF04748 Divergent polysaccharide deacetylase 33 237 1.1E-71 T 13-09-2016 IPR006837 Protein of unknown function DUF610, YibQ PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 Gene3D G3DSA:3.30.70.120 1 112 7.4E-50 T 13-09-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 PANTHER PTHR30115 1 112 4.2E-78 T 13-09-2016 PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.6E-43 T 13-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 PIRSF PIRSF039144 1 112 1.3E-54 T 13-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 SUPERFAMILY SSF54913 1 112 4.45E-45 T 13-09-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-09-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 PANTHER PTHR30115:SF12 1 112 4.2E-78 T 13-09-2016 PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-09-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 SMART SM00938 4 105 4.1E-65 T 13-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 PRINTS PR00340 P-II protein signature 52 75 2.0E-43 T 13-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 PRINTS PR00340 P-II protein signature 23 41 2.0E-43 T 13-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 PRINTS PR00340 P-II protein signature 83 103 2.0E-43 T 13-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PMA3_RS29325 54ba59de1f5bae1d7acfd49f60afacaa 112 PRINTS PR00340 P-II protein signature 2 17 2.0E-43 T 13-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 1.3E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 1.3E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 189 1.3E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 Gene3D G3DSA:3.40.50.720 11 269 7.9E-81 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PANTHER PTHR24321:SF6 17 268 5.9E-58 T 13-09-2016 PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 265 1.2E-63 T 13-09-2016 PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PANTHER PTHR24321 17 268 5.9E-58 T 13-09-2016 PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 SUPERFAMILY SSF51735 20 269 5.49E-80 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 157 185 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 4.1E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 4.1E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 4.1E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 4.1E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 4.1E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06690 8533618abd65d507e07d39dfc9bc6976 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 4.1E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20000 f45290b222e8d352e9e3a23dcfa9e32f 806 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 789 806 - T 13-09-2016 IPR010917 TonB-dependent receptor, conserved site PMA3_RS20000 f45290b222e8d352e9e3a23dcfa9e32f 806 Gene3D G3DSA:2.170.130.10 136 250 1.7E-31 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS20000 f45290b222e8d352e9e3a23dcfa9e32f 806 Pfam PF07715 TonB-dependent Receptor Plug Domain 136 249 8.2E-21 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS20000 f45290b222e8d352e9e3a23dcfa9e32f 806 Pfam PF00593 TonB dependent receptor 542 803 8.7E-32 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS20000 f45290b222e8d352e9e3a23dcfa9e32f 806 Gene3D G3DSA:2.40.170.20 251 806 8.1E-105 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS20000 f45290b222e8d352e9e3a23dcfa9e32f 806 SMART SM00965 54 104 1.1E-16 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS20000 f45290b222e8d352e9e3a23dcfa9e32f 806 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 137 806 5.4E-86 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS20000 f45290b222e8d352e9e3a23dcfa9e32f 806 SUPERFAMILY SSF56935 120 806 2.29E-114 T 13-09-2016 PMA3_RS20000 f45290b222e8d352e9e3a23dcfa9e32f 806 Pfam PF07660 Secretin and TonB N terminus short domain 54 103 2.6E-13 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS20000 f45290b222e8d352e9e3a23dcfa9e32f 806 PANTHER PTHR30442 26 806 3.1E-165 T 13-09-2016 PMA3_RS12350 61a56efe8735d383b32c574c512be36a 91 SUPERFAMILY SSF54534 3 88 1.37E-25 T 13-09-2016 PMA3_RS12350 61a56efe8735d383b32c574c512be36a 91 Gene3D G3DSA:3.10.50.40 2 90 9.2E-30 T 13-09-2016 PMA3_RS12350 61a56efe8735d383b32c574c512be36a 91 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 29 49 - T 13-09-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PMA3_RS12350 61a56efe8735d383b32c574c512be36a 91 Pfam PF00639 PPIC-type PPIASE domain 11 87 8.4E-18 T 13-09-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PMA3_RS12350 61a56efe8735d383b32c574c512be36a 91 PANTHER PTHR10657 5 87 2.5E-30 T 13-09-2016 PMA3_RS28250 05dd41a5365ec01ade26f26c0063c236 127 PANTHER PTHR35371 1 127 6.0E-31 T 13-09-2016 PMA3_RS28250 05dd41a5365ec01ade26f26c0063c236 127 PANTHER PTHR35371:SF1 1 127 6.0E-31 T 13-09-2016 PMA3_RS28250 05dd41a5365ec01ade26f26c0063c236 127 Pfam PF01124 MAPEG family 3 126 3.3E-22 T 13-09-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PMA3_RS28250 05dd41a5365ec01ade26f26c0063c236 127 Gene3D G3DSA:1.20.120.550 2 124 3.1E-15 T 13-09-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain PMA3_RS28250 05dd41a5365ec01ade26f26c0063c236 127 SUPERFAMILY SSF161084 1 124 3.66E-26 T 13-09-2016 PMA3_RS04620 b4f2a971d38e6f1336c1787867acee3e 238 SUPERFAMILY SSF46689 32 103 4.21E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS04620 b4f2a971d38e6f1336c1787867acee3e 238 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 83 6.1E-7 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS04620 b4f2a971d38e6f1336c1787867acee3e 238 Gene3D G3DSA:1.10.357.10 34 236 9.6E-33 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS04620 b4f2a971d38e6f1336c1787867acee3e 238 PANTHER PTHR30055 24 103 1.3E-28 T 13-09-2016 PMA3_RS04620 b4f2a971d38e6f1336c1787867acee3e 238 PANTHER PTHR30055 119 238 1.3E-28 T 13-09-2016 PMA3_RS04620 b4f2a971d38e6f1336c1787867acee3e 238 PANTHER PTHR30055:SF2 119 238 1.3E-28 T 13-09-2016 PMA3_RS04620 b4f2a971d38e6f1336c1787867acee3e 238 PANTHER PTHR30055:SF2 24 103 1.3E-28 T 13-09-2016 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 321 640 3.8E-123 T 13-09-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 85 111 4.0E-97 T 13-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 216 242 4.0E-97 T 13-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 280 300 4.0E-97 T 13-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 137 154 4.0E-97 T 13-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 316 335 4.0E-97 T 13-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 165 187 4.0E-97 T 13-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 300 316 4.0E-97 T 13-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 250 270 4.0E-97 T 13-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 58 644 2.8E-234 T 13-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 Pfam PF01578 Cytochrome C assembly protein 94 301 4.9E-55 T 13-09-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 319 334 5.9E-66 T 13-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 195 210 5.9E-66 T 13-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 400 419 5.9E-66 T 13-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 9 33 5.9E-66 T 13-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 118 141 5.9E-66 T 13-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 357 374 5.9E-66 T 13-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 634 647 5.9E-66 T 13-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PANTHER PTHR30009 476 659 0.0 T 13-09-2016 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PANTHER PTHR30009 5 423 0.0 T 13-09-2016 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PANTHER PTHR30009:SF0 476 659 0.0 T 13-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21495 bf043073f466a257a64e524ba0e6b6e2 662 PANTHER PTHR30009:SF0 5 423 0.0 T 13-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS10110 fd1216ab36131d6d762c0e114faa8e0f 310 PANTHER PTHR37418 142 305 1.4E-90 T 13-09-2016 PMA3_RS10110 fd1216ab36131d6d762c0e114faa8e0f 310 PANTHER PTHR37418 4 119 1.4E-90 T 13-09-2016 PMA3_RS10110 fd1216ab36131d6d762c0e114faa8e0f 310 PANTHER PTHR37418:SF2 4 119 1.4E-90 T 13-09-2016 PMA3_RS10110 fd1216ab36131d6d762c0e114faa8e0f 310 PANTHER PTHR37418:SF2 142 305 1.4E-90 T 13-09-2016 PMA3_RS10110 fd1216ab36131d6d762c0e114faa8e0f 310 Pfam PF05853 beta-keto acid cleavage enzyme 6 302 1.4E-107 T 13-09-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 PMA3_RS10110 fd1216ab36131d6d762c0e114faa8e0f 310 Gene3D G3DSA:3.20.20.70 5 305 2.9E-112 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 Pfam PF12804 MobA-like NTP transferase domain 6 126 4.5E-23 T 13-09-2016 IPR025877 MobA-like NTP transferase PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 Gene3D G3DSA:2.160.10.10 320 449 4.8E-32 T 13-09-2016 PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 PANTHER PTHR22572:SF115 4 446 4.4E-218 T 13-09-2016 PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 PANTHER PTHR22572 4 446 4.4E-218 T 13-09-2016 PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 Gene3D G3DSA:3.90.550.10 1 244 1.7E-68 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.783 T 13-09-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 296 1.7E-7 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 425 0.0015 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 Gene3D G3DSA:2.160.10.10 245 319 1.6E-17 T 13-09-2016 PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 4.2E-198 T 13-09-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 SUPERFAMILY SSF53448 1 249 3.38E-62 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS29995 d17387f9ab104e699d3a1e06fd924d92 455 SUPERFAMILY SSF51161 252 439 1.3E-47 T 13-09-2016 IPR011004 Trimeric LpxA-like PMA3_RS24715 c8be2b332015882421a1a4855b183332 322 SUPERFAMILY SSF53850 90 299 4.5E-37 T 13-09-2016 PMA3_RS24715 c8be2b332015882421a1a4855b183332 322 Gene3D G3DSA:1.10.10.10 3 86 5.0E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24715 c8be2b332015882421a1a4855b183332 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.2E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS24715 c8be2b332015882421a1a4855b183332 322 Gene3D G3DSA:3.40.190.10 179 263 1.3E-15 T 13-09-2016 PMA3_RS24715 c8be2b332015882421a1a4855b183332 322 PANTHER PTHR30126 1 309 1.0E-139 T 13-09-2016 PMA3_RS24715 c8be2b332015882421a1a4855b183332 322 Gene3D G3DSA:3.40.190.10 92 178 1.0E-16 T 13-09-2016 PMA3_RS24715 c8be2b332015882421a1a4855b183332 322 Pfam PF03466 LysR substrate binding domain 88 294 8.4E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS24715 c8be2b332015882421a1a4855b183332 322 PANTHER PTHR30126:SF26 1 309 1.0E-139 T 13-09-2016 PMA3_RS24715 c8be2b332015882421a1a4855b183332 322 SUPERFAMILY SSF46785 4 86 8.46E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28280 d5704d1e53692259417e0a3d54493ff5 281 Pfam PF02219 Methylenetetrahydrofolate reductase 4 277 1.4E-90 T 13-09-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 PMA3_RS28280 d5704d1e53692259417e0a3d54493ff5 281 PANTHER PTHR21091:SF31 136 271 4.9E-44 T 13-09-2016 PMA3_RS28280 d5704d1e53692259417e0a3d54493ff5 281 PANTHER PTHR21091 136 271 4.9E-44 T 13-09-2016 PMA3_RS28280 d5704d1e53692259417e0a3d54493ff5 281 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 7 278 2.0E-102 T 13-09-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 PMA3_RS28280 d5704d1e53692259417e0a3d54493ff5 281 Gene3D G3DSA:3.20.20.220 3 279 1.3E-108 T 13-09-2016 IPR029041 FAD-linked oxidoreductase-like PMA3_RS28280 d5704d1e53692259417e0a3d54493ff5 281 SUPERFAMILY SSF51730 4 279 3.73E-96 T 13-09-2016 IPR029041 FAD-linked oxidoreductase-like PMA3_RS14285 4a11de670fb9f278769a90439aec5627 173 Gene3D G3DSA:3.40.50.300 8 115 8.9E-14 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14285 4a11de670fb9f278769a90439aec5627 173 SUPERFAMILY SSF52540 8 172 2.55E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14285 4a11de670fb9f278769a90439aec5627 173 PANTHER PTHR21087:SF7 7 173 5.2E-26 T 13-09-2016 PMA3_RS14285 4a11de670fb9f278769a90439aec5627 173 PANTHER PTHR21087 7 173 5.2E-26 T 13-09-2016 PMA3_RS14285 4a11de670fb9f278769a90439aec5627 173 Pfam PF13238 AAA domain 9 112 1.1E-8 T 13-09-2016 PMA3_RS28240 309795679e1a9d473670a3ca8c9f26cd 149 Gene3D G3DSA:1.20.120.10 26 148 7.3E-32 T 13-09-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 PMA3_RS28240 309795679e1a9d473670a3ca8c9f26cd 149 SUPERFAMILY SSF47175 22 147 2.65E-31 T 13-09-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 PMA3_RS28240 309795679e1a9d473670a3ca8c9f26cd 149 PIRSF PIRSF000027 5 149 6.9E-35 T 13-09-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 PMA3_RS28240 309795679e1a9d473670a3ca8c9f26cd 149 Pfam PF01322 Cytochrome C' 29 147 7.4E-30 T 13-09-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 PMA3_RS11570 1a27cf7a0ad476cd74d150300d963862 477 PIRSF PIRSF036492 1 475 3.8E-138 T 13-09-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 PMA3_RS11570 1a27cf7a0ad476cd74d150300d963862 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 219 226 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS11570 1a27cf7a0ad476cd74d150300d963862 477 SUPERFAMILY SSF53720 11 446 3.01E-105 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS11570 1a27cf7a0ad476cd74d150300d963862 477 PANTHER PTHR11699:SF15 13 477 1.4E-142 T 13-09-2016 PMA3_RS11570 1a27cf7a0ad476cd74d150300d963862 477 Gene3D G3DSA:3.40.309.10 234 425 3.6E-46 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS11570 1a27cf7a0ad476cd74d150300d963862 477 Pfam PF00171 Aldehyde dehydrogenase family 18 445 2.9E-83 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS11570 1a27cf7a0ad476cd74d150300d963862 477 PANTHER PTHR11699 13 477 1.4E-142 T 13-09-2016 PMA3_RS11570 1a27cf7a0ad476cd74d150300d963862 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 247 258 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS11570 1a27cf7a0ad476cd74d150300d963862 477 Gene3D G3DSA:3.40.605.10 13 233 1.2E-49 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS04765 112c1c20920f4cc9a876515c435232f1 269 PIRSF PIRSF018249 1 268 5.6E-88 T 13-09-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 PMA3_RS04765 112c1c20920f4cc9a876515c435232f1 269 PANTHER PTHR10108 20 265 8.5E-51 T 13-09-2016 PMA3_RS04765 112c1c20920f4cc9a876515c435232f1 269 PANTHER PTHR10108:SF886 20 265 8.5E-51 T 13-09-2016 PMA3_RS04765 112c1c20920f4cc9a876515c435232f1 269 Gene3D G3DSA:3.40.50.150 65 194 1.7E-18 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04765 112c1c20920f4cc9a876515c435232f1 269 SUPERFAMILY SSF53335 1 246 4.8E-39 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04765 112c1c20920f4cc9a876515c435232f1 269 Pfam PF13649 Methyltransferase domain 86 159 1.1E-9 T 13-09-2016 PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 PANTHER PTHR24220 277 308 7.2E-160 T 13-09-2016 PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 PANTHER PTHR24220 3 248 7.2E-160 T 13-09-2016 PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 Pfam PF09383 NIL domain 263 333 1.1E-17 T 13-09-2016 IPR018449 NIL domain PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 SUPERFAMILY SSF55021 262 334 1.1E-15 T 13-09-2016 PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 SMART SM00930 261 334 5.1E-23 T 13-09-2016 IPR018449 NIL domain PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 Pfam PF00005 ABC transporter 21 170 1.1E-36 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 Gene3D G3DSA:3.40.50.300 1 237 4.0E-88 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 SUPERFAMILY SSF52540 1 241 1.33E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 Gene3D G3DSA:3.30.70.260 238 335 3.3E-25 T 13-09-2016 PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 SMART SM00382 30 219 6.0E-18 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 PANTHER PTHR24220:SF455 277 308 7.2E-160 T 13-09-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 PMA3_RS00050 bf3db44418cf2672534e2044c65241e6 335 PANTHER PTHR24220:SF455 3 248 7.2E-160 T 13-09-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 PMA3_RS24390 5bce7a0189a7c4697d964623674a34ec 642 Pfam PF09423 PhoD-like phosphatase 309 555 1.2E-6 T 13-09-2016 IPR018946 Alkaline phosphatase D-related PMA3_RS24390 5bce7a0189a7c4697d964623674a34ec 642 PANTHER PTHR37031 307 640 5.0E-110 T 13-09-2016 PMA3_RS24390 5bce7a0189a7c4697d964623674a34ec 642 PANTHER PTHR37031:SF2 307 640 5.0E-110 T 13-09-2016 PMA3_RS24390 5bce7a0189a7c4697d964623674a34ec 642 PANTHER PTHR37031 128 236 5.0E-110 T 13-09-2016 PMA3_RS24390 5bce7a0189a7c4697d964623674a34ec 642 SUPERFAMILY SSF56300 148 193 3.41E-9 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS24390 5bce7a0189a7c4697d964623674a34ec 642 SUPERFAMILY SSF56300 311 353 3.41E-9 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS24390 5bce7a0189a7c4697d964623674a34ec 642 SUPERFAMILY SSF56300 403 560 3.41E-9 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS24390 5bce7a0189a7c4697d964623674a34ec 642 PANTHER PTHR37031:SF2 128 236 5.0E-110 T 13-09-2016 PMA3_RS03985 5f5fdeeabf8595fb78f76ff82e7c1e3d 209 Gene3D G3DSA:3.40.50.1820 6 205 9.1E-40 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS03985 5f5fdeeabf8595fb78f76ff82e7c1e3d 209 PANTHER PTHR12277:SF79 7 203 2.2E-54 T 13-09-2016 PMA3_RS03985 5f5fdeeabf8595fb78f76ff82e7c1e3d 209 PANTHER PTHR12277 7 203 2.2E-54 T 13-09-2016 PMA3_RS03985 5f5fdeeabf8595fb78f76ff82e7c1e3d 209 Pfam PF00975 Thioesterase domain 87 136 1.2E-9 T 13-09-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PMA3_RS03985 5f5fdeeabf8595fb78f76ff82e7c1e3d 209 SUPERFAMILY SSF53474 3 204 6.51E-39 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01760 c4dfeecc2cfe3b7f4243dd76d49ab2c4 464 Gene3D G3DSA:3.60.21.10 146 462 3.2E-15 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS01760 c4dfeecc2cfe3b7f4243dd76d49ab2c4 464 SUPERFAMILY SSF56300 140 373 1.95E-17 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS01760 c4dfeecc2cfe3b7f4243dd76d49ab2c4 464 Pfam PF09423 PhoD-like phosphatase 145 402 2.5E-22 T 13-09-2016 IPR018946 Alkaline phosphatase D-related PMA3_RS10620 7e1f1efb7283e955a228ed755257950e 372 Pfam PF06812 ImpA, N-terminal, type VI secretion system 11 110 6.3E-14 T 13-09-2016 IPR010657 ImpA, N-terminal PMA3_RS10620 7e1f1efb7283e955a228ed755257950e 372 PANTHER PTHR30128 254 370 2.1E-32 T 13-09-2016 PMA3_RS10620 7e1f1efb7283e955a228ed755257950e 372 SUPERFAMILY SSF103088 256 365 6.41E-27 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS10620 7e1f1efb7283e955a228ed755257950e 372 PANTHER PTHR30128:SF11 254 370 2.1E-32 T 13-09-2016 PMA3_RS10620 7e1f1efb7283e955a228ed755257950e 372 Gene3D G3DSA:3.30.1330.60 253 363 5.3E-28 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS10620 7e1f1efb7283e955a228ed755257950e 372 Pfam PF00691 OmpA family 261 357 2.0E-14 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS04530 4aa4596e1618079b837957a189432db7 368 Gene3D G3DSA:3.20.20.70 1 344 1.4E-128 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS04530 4aa4596e1618079b837957a189432db7 368 PANTHER PTHR22893 1 355 4.8E-169 T 13-09-2016 PMA3_RS04530 4aa4596e1618079b837957a189432db7 368 SUPERFAMILY SSF51395 1 353 5.5E-117 T 13-09-2016 PMA3_RS04530 4aa4596e1618079b837957a189432db7 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 336 3.8E-73 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS04530 4aa4596e1618079b837957a189432db7 368 PANTHER PTHR22893:SF7 1 355 4.8E-169 T 13-09-2016 PMA3_RS22985 152b7608b692f52550044cc81dfe7d5c 63 SUPERFAMILY SSF69047 5 61 2.48E-13 T 13-09-2016 IPR008462 CsbD-like PMA3_RS22985 152b7608b692f52550044cc81dfe7d5c 63 Pfam PF05532 CsbD-like 6 58 2.3E-17 T 13-09-2016 IPR008462 CsbD-like PMA3_RS22985 152b7608b692f52550044cc81dfe7d5c 63 Gene3D G3DSA:1.10.1470.10 6 62 1.7E-16 T 13-09-2016 IPR008462 CsbD-like PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 SUPERFAMILY SSF50249 312 390 2.06E-18 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 Gene3D G3DSA:3.30.470.30 131 247 1.3E-20 T 13-09-2016 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 PANTHER PTHR23389 25 526 4.4E-142 T 13-09-2016 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 Hamap MF_01587 DNA ligase B [ligB]. 1 559 53.776 T 13-09-2016 IPR020923 DNA ligase B GO:0003911|GO:0006259 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 SMART SM00532 32 429 1.7E-47 T 13-09-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 SUPERFAMILY SSF47781 392 558 1.22E-28 T 13-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 Gene3D G3DSA:1.10.287.610 32 73 4.8E-4 T 13-09-2016 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 PIRSF PIRSF001604 27 559 2.3E-65 T 13-09-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 PANTHER PTHR23389:SF7 25 526 4.4E-142 T 13-09-2016 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 SUPERFAMILY SSF56091 28 309 9.36E-70 T 13-09-2016 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 Gene3D G3DSA:1.10.150.20 417 480 3.9E-6 T 13-09-2016 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 32 309 4.0E-26 T 13-09-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 Gene3D G3DSA:2.40.50.140 313 384 1.5E-19 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS28230 836587da1bd2fba16b66823b860c263a 562 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 315 389 3.8E-19 T 13-09-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 PMA3_RS23320 f3d13d7157072024b5ace960598137e8 161 SUPERFAMILY SSF89963 2 87 7.06E-26 T 13-09-2016 IPR007551 Protein of unknown function DUF520 PMA3_RS23320 f3d13d7157072024b5ace960598137e8 161 PANTHER PTHR30476 1 161 1.8E-81 T 13-09-2016 PMA3_RS23320 f3d13d7157072024b5ace960598137e8 161 Gene3D G3DSA:3.30.70.990 9 94 9.2E-27 T 13-09-2016 PMA3_RS23320 f3d13d7157072024b5ace960598137e8 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 4.1E-61 T 13-09-2016 IPR007551 Protein of unknown function DUF520 PMA3_RS23320 f3d13d7157072024b5ace960598137e8 161 PANTHER PTHR30476:SF0 1 161 1.8E-81 T 13-09-2016 PMA3_RS23320 f3d13d7157072024b5ace960598137e8 161 SUPERFAMILY SSF89963 90 161 3.66E-28 T 13-09-2016 IPR007551 Protein of unknown function DUF520 PMA3_RS23320 f3d13d7157072024b5ace960598137e8 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 27.338 T 13-09-2016 IPR007551 Protein of unknown function DUF520 PMA3_RS23320 f3d13d7157072024b5ace960598137e8 161 Gene3D G3DSA:3.30.70.860 95 161 1.1E-33 T 13-09-2016 PMA3_RS17460 03c6f32327ce6cb3fbbe8062166cab82 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 2 334 1.3E-127 T 13-09-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS17460 03c6f32327ce6cb3fbbe8062166cab82 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 2 334 3.4E-134 T 13-09-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS17460 03c6f32327ce6cb3fbbe8062166cab82 344 SUPERFAMILY SSF55729 1 334 3.97E-121 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS17460 03c6f32327ce6cb3fbbe8062166cab82 344 PANTHER PTHR30420:SF1 1 342 2.9E-152 T 13-09-2016 PMA3_RS17460 03c6f32327ce6cb3fbbe8062166cab82 344 Gene3D G3DSA:3.40.630.30 1 77 5.3E-7 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS17460 03c6f32327ce6cb3fbbe8062166cab82 344 Gene3D G3DSA:3.40.630.30 112 131 5.3E-7 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS17460 03c6f32327ce6cb3fbbe8062166cab82 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 333 2.6E-127 T 13-09-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS17460 03c6f32327ce6cb3fbbe8062166cab82 344 PANTHER PTHR30420 1 342 2.9E-152 T 13-09-2016 PMA3_RS14605 f955dd5c1e7c42d185e5c3cd384a4c2e 386 Gene3D G3DSA:3.90.230.10 157 384 7.8E-50 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS14605 f955dd5c1e7c42d185e5c3cd384a4c2e 386 Pfam PF01321 Creatinase/Prolidase N-terminal domain 13 157 1.8E-16 T 13-09-2016 IPR000587 Creatinase, N-terminal GO:0016787 PMA3_RS14605 f955dd5c1e7c42d185e5c3cd384a4c2e 386 Pfam PF00557 Metallopeptidase family M24 165 366 2.9E-34 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS14605 f955dd5c1e7c42d185e5c3cd384a4c2e 386 PRINTS PR00599 Methionine aminopeptidase-1 signature 237 253 4.1E-7 T 13-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase PMA3_RS14605 f955dd5c1e7c42d185e5c3cd384a4c2e 386 PRINTS PR00599 Methionine aminopeptidase-1 signature 335 347 4.1E-7 T 13-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase PMA3_RS14605 f955dd5c1e7c42d185e5c3cd384a4c2e 386 Gene3D G3DSA:3.40.350.10 1 155 3.5E-28 T 13-09-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PMA3_RS14605 f955dd5c1e7c42d185e5c3cd384a4c2e 386 SUPERFAMILY SSF55920 157 384 1.7E-55 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS14605 f955dd5c1e7c42d185e5c3cd384a4c2e 386 PANTHER PTHR10804:SF109 141 386 3.5E-34 T 13-09-2016 PMA3_RS14605 f955dd5c1e7c42d185e5c3cd384a4c2e 386 SUPERFAMILY SSF53092 3 155 2.44E-31 T 13-09-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PMA3_RS14605 f955dd5c1e7c42d185e5c3cd384a4c2e 386 PANTHER PTHR10804 141 386 3.5E-34 T 13-09-2016 PMA3_RS29015 2de5cfe4f2c64483664cff965d8fa86f 538 SUPERFAMILY SSF161098 8 256 4.77E-48 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29015 2de5cfe4f2c64483664cff965d8fa86f 538 PANTHER PTHR30183:SF2 403 538 2.1E-268 T 13-09-2016 PMA3_RS29015 2de5cfe4f2c64483664cff965d8fa86f 538 PANTHER PTHR30183:SF2 3 386 2.1E-268 T 13-09-2016 PMA3_RS29015 2de5cfe4f2c64483664cff965d8fa86f 538 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 360 523 2.6E-8 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29015 2de5cfe4f2c64483664cff965d8fa86f 538 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 251 5.6E-14 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29015 2de5cfe4f2c64483664cff965d8fa86f 538 SUPERFAMILY SSF161098 280 531 2.09E-35 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29015 2de5cfe4f2c64483664cff965d8fa86f 538 PANTHER PTHR30183 403 538 2.1E-268 T 13-09-2016 PMA3_RS29015 2de5cfe4f2c64483664cff965d8fa86f 538 PANTHER PTHR30183 3 386 2.1E-268 T 13-09-2016 PMA3_RS29015 2de5cfe4f2c64483664cff965d8fa86f 538 Gene3D G3DSA:1.10.3720.10 10 259 8.0E-41 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29015 2de5cfe4f2c64483664cff965d8fa86f 538 Gene3D G3DSA:1.10.3720.10 289 531 1.3E-30 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 13-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 SUPERFAMILY SSF53901 279 398 1.55E-39 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 PIRSF PIRSF000429 1 400 1.1E-113 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 Gene3D G3DSA:3.40.47.10 186 281 6.1E-56 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 Gene3D G3DSA:3.40.47.10 3 125 6.1E-56 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 PANTHER PTHR18919:SF14 1 400 1.2E-183 T 13-09-2016 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 1.3E-122 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 Gene3D G3DSA:3.40.47.10 145 185 7.2E-57 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 Gene3D G3DSA:3.40.47.10 284 398 7.2E-57 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 SUPERFAMILY SSF53901 2 274 6.53E-65 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 Pfam PF02803 Thiolase, C-terminal domain 278 398 2.1E-42 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 Pfam PF00108 Thiolase, N-terminal domain 4 269 4.0E-57 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS11870 e5a55c34a0c7594f6598132c52b0006f 400 PANTHER PTHR18919 1 400 1.2E-183 T 13-09-2016 PMA3_RS28790 5c8cd959e62c34b41783f1d2e3e14d8d 305 Gene3D G3DSA:2.120.10.30 64 301 9.3E-13 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS28790 5c8cd959e62c34b41783f1d2e3e14d8d 305 SUPERFAMILY SSF50956 15 302 1.07E-48 T 13-09-2016 PMA3_RS28790 5c8cd959e62c34b41783f1d2e3e14d8d 305 Pfam PF06977 SdiA-regulated 49 300 3.8E-100 T 13-09-2016 IPR009722 SdiA-regulated PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 23 129 1.4E-17 T 13-09-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 PANTHER PTHR11606:SF3 1 335 8.6E-103 T 13-09-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 Gene3D G3DSA:3.40.192.10 1 145 1.6E-50 T 13-09-2016 PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 170 190 4.6E-11 T 13-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 64 78 4.6E-11 T 13-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 280 291 4.6E-11 T 13-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 SUPERFAMILY SSF53223 2 134 1.98E-36 T 13-09-2016 PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 PIRSF PIRSF000188 1 339 2.3E-132 T 13-09-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 211 295 9.4E-11 T 13-09-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 Gene3D G3DSA:3.40.50.720 146 329 2.6E-45 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 SUPERFAMILY SSF51735 138 335 3.95E-46 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 SMART SM00839 138 339 2.3E-67 T 13-09-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 PMA3_RS24810 77596ddc85ef7fb89d9e5ee4590c74c8 339 PANTHER PTHR11606 1 335 8.6E-103 T 13-09-2016 PMA3_RS09840 396e0158c07b95da177fe9123a2b7460 259 PANTHER PTHR10992 4 256 2.1E-31 T 13-09-2016 PMA3_RS09840 396e0158c07b95da177fe9123a2b7460 259 Pfam PF00561 alpha/beta hydrolase fold 27 185 2.9E-12 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS09840 396e0158c07b95da177fe9123a2b7460 259 SUPERFAMILY SSF53474 3 255 5.83E-41 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS09840 396e0158c07b95da177fe9123a2b7460 259 PANTHER PTHR10992:SF832 4 256 2.1E-31 T 13-09-2016 PMA3_RS09840 396e0158c07b95da177fe9123a2b7460 259 Gene3D G3DSA:3.40.50.1820 4 256 1.7E-39 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS23345 aa5c15c9e39359535024d2b41df66fed 210 PANTHER PTHR11260 13 198 2.4E-47 T 13-09-2016 PMA3_RS23345 aa5c15c9e39359535024d2b41df66fed 210 PANTHER PTHR11260:SF144 13 198 2.4E-47 T 13-09-2016 PMA3_RS23345 aa5c15c9e39359535024d2b41df66fed 210 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 81 8.3E-13 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS23345 aa5c15c9e39359535024d2b41df66fed 210 Gene3D G3DSA:3.40.30.10 9 96 2.1E-18 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS23345 aa5c15c9e39359535024d2b41df66fed 210 SUPERFAMILY SSF52833 9 92 1.24E-16 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS23345 aa5c15c9e39359535024d2b41df66fed 210 SUPERFAMILY SSF47616 84 203 5.54E-15 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS23345 aa5c15c9e39359535024d2b41df66fed 210 Gene3D G3DSA:1.20.1050.10 97 207 4.9E-36 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 SUPERFAMILY SSF51735 1 252 9.32E-82 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 Gene3D G3DSA:3.40.50.720 1 251 5.7E-87 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 2.3E-72 T 13-09-2016 PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PANTHER PTHR24321:SF6 3 252 4.0E-54 T 13-09-2016 PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PANTHER PTHR24321 3 252 4.0E-54 T 13-09-2016 PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.5E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.5E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.5E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.5E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.5E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS06055 fcf4fe6e1593e27ff5f50f2a06835707 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.5E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS29980 10ca31029b63d9f46bf6d50daefc75bb 300 SUPERFAMILY SSF53850 89 296 1.99E-41 T 13-09-2016 PMA3_RS29980 10ca31029b63d9f46bf6d50daefc75bb 300 Pfam PF03466 LysR substrate binding domain 88 292 3.3E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS29980 10ca31029b63d9f46bf6d50daefc75bb 300 Gene3D G3DSA:3.40.190.10 89 171 7.8E-4 T 13-09-2016 PMA3_RS29980 10ca31029b63d9f46bf6d50daefc75bb 300 SUPERFAMILY SSF46785 4 111 1.32E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29980 10ca31029b63d9f46bf6d50daefc75bb 300 PANTHER PTHR30537 1 298 5.3E-111 T 13-09-2016 PMA3_RS29980 10ca31029b63d9f46bf6d50daefc75bb 300 PANTHER PTHR30537:SF24 1 298 5.3E-111 T 13-09-2016 PMA3_RS29980 10ca31029b63d9f46bf6d50daefc75bb 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.1E-15 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29980 10ca31029b63d9f46bf6d50daefc75bb 300 Gene3D G3DSA:3.40.190.10 172 257 1.0E-17 T 13-09-2016 PMA3_RS29980 10ca31029b63d9f46bf6d50daefc75bb 300 Gene3D G3DSA:1.10.10.10 3 85 1.4E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03000 ae7f2fdb93f0b8586fdfd9a233f9c250 183 SUPERFAMILY SSF52317 4 183 6.77E-45 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS03000 ae7f2fdb93f0b8586fdfd9a233f9c250 183 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 178 1.4E-48 T 13-09-2016 IPR006287 DJ-1 PMA3_RS03000 ae7f2fdb93f0b8586fdfd9a233f9c250 183 PANTHER PTHR11019:SF4 1 168 2.0E-44 T 13-09-2016 PMA3_RS03000 ae7f2fdb93f0b8586fdfd9a233f9c250 183 Pfam PF01965 DJ-1/PfpI family 4 167 3.6E-41 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS03000 ae7f2fdb93f0b8586fdfd9a233f9c250 183 Gene3D G3DSA:3.40.50.880 4 183 1.0E-50 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS03000 ae7f2fdb93f0b8586fdfd9a233f9c250 183 PANTHER PTHR11019 1 168 2.0E-44 T 13-09-2016 PMA3_RS01135 6798dec9b2ddefaab7f6213a369fe8fb 137 PANTHER PTHR12231:SF138 18 137 1.1E-29 T 13-09-2016 PMA3_RS01135 6798dec9b2ddefaab7f6213a369fe8fb 137 Gene3D G3DSA:3.40.250.10 38 136 2.5E-23 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01135 6798dec9b2ddefaab7f6213a369fe8fb 137 SUPERFAMILY SSF52821 14 137 1.7E-29 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01135 6798dec9b2ddefaab7f6213a369fe8fb 137 PANTHER PTHR12231 18 137 1.1E-29 T 13-09-2016 PMA3_RS01135 6798dec9b2ddefaab7f6213a369fe8fb 137 SMART SM00450 38 134 2.4E-13 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01135 6798dec9b2ddefaab7f6213a369fe8fb 137 Pfam PF00581 Rhodanese-like domain 41 130 1.8E-12 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS22905 bdc768dba0cb387f462cf6a92763655e 106 Pfam PF12840 Helix-turn-helix domain 6 77 1.1E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22905 bdc768dba0cb387f462cf6a92763655e 106 SMART SM00418 7 98 9.2E-11 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS22905 bdc768dba0cb387f462cf6a92763655e 106 Gene3D G3DSA:1.10.10.10 3 99 2.0E-30 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22905 bdc768dba0cb387f462cf6a92763655e 106 PANTHER PTHR33154 3 100 9.2E-23 T 13-09-2016 PMA3_RS22905 bdc768dba0cb387f462cf6a92763655e 106 SUPERFAMILY SSF46785 2 97 2.29E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08765 002b8f975bc4e1c92928ac905258051c 328 PIRSF PIRSF006621 1 326 2.7E-75 T 13-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS08765 002b8f975bc4e1c92928ac905258051c 328 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 10 325 2.6E-139 T 13-09-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 PMA3_RS08765 002b8f975bc4e1c92928ac905258051c 328 SUPERFAMILY SSF51395 11 310 2.71E-74 T 13-09-2016 PMA3_RS08765 002b8f975bc4e1c92928ac905258051c 328 PANTHER PTHR11082:SF29 1 305 3.6E-139 T 13-09-2016 PMA3_RS08765 002b8f975bc4e1c92928ac905258051c 328 PANTHER PTHR11082 1 305 3.6E-139 T 13-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS08765 002b8f975bc4e1c92928ac905258051c 328 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 6 327 51.149 T 13-09-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 PMA3_RS08765 002b8f975bc4e1c92928ac905258051c 328 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 93 111 - T 13-09-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS08765 002b8f975bc4e1c92928ac905258051c 328 Pfam PF01207 Dihydrouridine synthase (Dus) 14 319 1.5E-84 T 13-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS08765 002b8f975bc4e1c92928ac905258051c 328 Gene3D G3DSA:3.20.20.70 9 253 1.8E-75 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS10510 8e41008b37e7ea087ed8d27a055f4b50 126 Gene3D G3DSA:3.30.1330.40 20 126 4.2E-31 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS10510 8e41008b37e7ea087ed8d27a055f4b50 126 Pfam PF01042 Endoribonuclease L-PSP 27 124 1.8E-22 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS10510 8e41008b37e7ea087ed8d27a055f4b50 126 PANTHER PTHR11803 27 126 3.2E-28 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS10510 8e41008b37e7ea087ed8d27a055f4b50 126 SUPERFAMILY SSF55298 27 125 9.9E-29 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 SUPERFAMILY SSF47794 432 492 1.27E-15 T 13-09-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 415 1.8E-20 T 13-09-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 442 491 1.3E-18 T 13-09-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 344 4.0E-121 T 13-09-2016 IPR010213 Transcription termination factor NusA GO:0003723 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 SUPERFAMILY SSF54814 202 280 1.7E-28 T 13-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 SUPERFAMILY SSF54814 281 345 7.19E-15 T 13-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Pfam PF14520 Helix-hairpin-helix domain 434 488 1.2E-8 T 13-09-2016 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 PANTHER PTHR22648:SF0 1 450 9.9E-175 T 13-09-2016 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 28.884 T 13-09-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 PANTHER PTHR22648 1 450 9.9E-175 T 13-09-2016 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 SUPERFAMILY SSF69705 1 128 7.19E-38 T 13-09-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Pfam PF08529 NusA N-terminal domain 4 125 5.2E-36 T 13-09-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Pfam PF00575 S1 RNA binding domain 136 197 1.4E-6 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Gene3D G3DSA:2.40.50.140 131 200 2.3E-22 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 SUPERFAMILY SSF47794 357 418 2.35E-16 T 13-09-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Gene3D G3DSA:1.10.150.20 359 422 9.0E-22 T 13-09-2016 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Gene3D G3DSA:1.10.150.20 431 492 9.0E-22 T 13-09-2016 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 SMART SM00316 135 202 1.3E-10 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Gene3D G3DSA:3.30.1480.10 1 126 1.1E-42 T 13-09-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Pfam PF13184 NusA-like KH domain 232 299 1.9E-26 T 13-09-2016 IPR025249 KH domain, NusA-like GO:0003723 PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Gene3D G3DSA:3.30.300.20 201 279 3.4E-33 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 Gene3D G3DSA:3.30.300.20 280 348 3.5E-27 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS25495 9171f77d3ca7dbbd24d2c5729ae01dbe 493 SUPERFAMILY SSF50249 134 201 3.51E-17 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 SUPERFAMILY SSF52172 1 103 8.4E-22 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 PANTHER PTHR24421:SF16 1 333 1.7E-104 T 13-09-2016 PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 SUPERFAMILY SSF52738 150 334 7.85E-61 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 Pfam PF00072 Response regulator receiver domain 3 102 3.8E-16 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 PANTHER PTHR24421 1 333 1.7E-104 T 13-09-2016 PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 PIRSF PIRSF000876 1 336 4.7E-100 T 13-09-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 Gene3D G3DSA:3.40.50.180 148 335 6.9E-67 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 SMART SM00448 1 124 2.4E-14 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 Gene3D G3DSA:3.40.50.2300 1 105 1.6E-22 T 13-09-2016 PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 Pfam PF01339 CheB methylesterase 154 330 1.9E-55 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS04600 be86de833a2043dc18ac2940aa8a5382 336 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 335 32.001 T 13-09-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 Pfam PF07559 Flagellar basal body protein FlaE 181 359 1.0E-22 T 13-09-2016 IPR011491 Flagellar hook protein FlgE PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 PANTHER PTHR30435 356 477 1.7E-85 T 13-09-2016 PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 SUPERFAMILY SSF117143 80 222 1.96E-66 T 13-09-2016 PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 SUPERFAMILY SSF117143 328 439 1.96E-66 T 13-09-2016 PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 SUPERFAMILY SSF117143 262 289 1.96E-66 T 13-09-2016 PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 399 477 6.6E-15 T 13-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 PANTHER PTHR30435:SF1 356 477 1.7E-85 T 13-09-2016 PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 PANTHER PTHR30435:SF1 1 124 1.7E-85 T 13-09-2016 PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 13-09-2016 IPR019776 Flagellar basal body rod protein, conserved site PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 Pfam PF00460 Flagella basal body rod protein 3 33 1.5E-9 T 13-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 PANTHER PTHR30435 1 124 1.7E-85 T 13-09-2016 PMA3_RS05815 e329f3afb09667988f050ce4efcfe00b 478 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 460 1.4E-91 T 13-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PMA3_RS05315 3001f105f3df4b5188af35c542e6a9a0 255 PANTHER PTHR24220 7 105 6.0E-126 T 13-09-2016 PMA3_RS05315 3001f105f3df4b5188af35c542e6a9a0 255 PANTHER PTHR24220:SF358 121 254 6.0E-126 T 13-09-2016 PMA3_RS05315 3001f105f3df4b5188af35c542e6a9a0 255 PANTHER PTHR24220 121 254 6.0E-126 T 13-09-2016 PMA3_RS05315 3001f105f3df4b5188af35c542e6a9a0 255 SMART SM00382 30 231 1.1E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS05315 3001f105f3df4b5188af35c542e6a9a0 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS05315 3001f105f3df4b5188af35c542e6a9a0 255 Pfam PF00005 ABC transporter 22 181 1.5E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS05315 3001f105f3df4b5188af35c542e6a9a0 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 2.7E-10 T 13-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PMA3_RS05315 3001f105f3df4b5188af35c542e6a9a0 255 PANTHER PTHR24220:SF358 7 105 6.0E-126 T 13-09-2016 PMA3_RS05315 3001f105f3df4b5188af35c542e6a9a0 255 Gene3D G3DSA:3.40.50.300 2 251 5.3E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05315 3001f105f3df4b5188af35c542e6a9a0 255 SUPERFAMILY SSF52540 5 253 3.52E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11110 beccb0ce6a038e0cd7165bfc4c8b2946 445 PANTHER PTHR11938 127 338 6.9E-54 T 13-09-2016 PMA3_RS11110 beccb0ce6a038e0cd7165bfc4c8b2946 445 PANTHER PTHR11938 355 398 6.9E-54 T 13-09-2016 PMA3_RS11110 beccb0ce6a038e0cd7165bfc4c8b2946 445 Pfam PF01645 Conserved region in glutamate synthase 85 336 2.5E-80 T 13-09-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PMA3_RS11110 beccb0ce6a038e0cd7165bfc4c8b2946 445 Pfam PF01645 Conserved region in glutamate synthase 365 408 6.8E-5 T 13-09-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PMA3_RS11110 beccb0ce6a038e0cd7165bfc4c8b2946 445 SUPERFAMILY SSF51395 15 423 2.69E-95 T 13-09-2016 PMA3_RS11110 beccb0ce6a038e0cd7165bfc4c8b2946 445 PIRSF PIRSF500061 3 444 4.0E-173 T 13-09-2016 PMA3_RS11110 beccb0ce6a038e0cd7165bfc4c8b2946 445 PIRSF PIRSF006429 3 443 1.5E-151 T 13-09-2016 IPR024188 Glutamate synthase large subunit-like protein PMA3_RS11110 beccb0ce6a038e0cd7165bfc4c8b2946 445 PANTHER PTHR11938:SF65 127 338 6.9E-54 T 13-09-2016 PMA3_RS11110 beccb0ce6a038e0cd7165bfc4c8b2946 445 PANTHER PTHR11938:SF65 355 398 6.9E-54 T 13-09-2016 PMA3_RS11110 beccb0ce6a038e0cd7165bfc4c8b2946 445 Gene3D G3DSA:3.20.20.70 9 442 3.4E-124 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PANTHER PTHR23023 332 392 1.0E-65 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PANTHER PTHR23023 76 315 1.0E-65 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PANTHER PTHR23023 1 58 1.0E-65 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 9 321 2.1E-22 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 SUPERFAMILY SSF51905 6 393 6.85E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 Gene3D G3DSA:3.50.50.60 206 369 7.8E-8 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PANTHER PTHR23023:SF100 332 392 1.0E-65 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PANTHER PTHR23023:SF100 76 315 1.0E-65 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PANTHER PTHR23023:SF100 1 58 1.0E-65 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 313 1.0E-9 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 198 216 1.0E-9 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.0E-9 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 198 223 1.8E-9 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 312 1.8E-9 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.8E-9 T 13-09-2016 PMA3_RS06355 ab4ab0a88ec97c13213ac843dc76bfa0 452 Gene3D G3DSA:3.50.50.60 7 205 5.2E-18 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06050 690faff38420c188871ea996bd6d4d81 334 PANTHER PTHR11695 24 334 5.4E-126 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS06050 690faff38420c188871ea996bd6d4d81 334 Gene3D G3DSA:3.40.50.720 142 302 3.9E-69 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06050 690faff38420c188871ea996bd6d4d81 334 Pfam PF00107 Zinc-binding dehydrogenase 159 292 4.2E-22 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS06050 690faff38420c188871ea996bd6d4d81 334 SUPERFAMILY SSF51735 125 299 3.6E-50 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06050 690faff38420c188871ea996bd6d4d81 334 PANTHER PTHR11695:SF595 24 334 5.4E-126 T 13-09-2016 PMA3_RS06050 690faff38420c188871ea996bd6d4d81 334 SUPERFAMILY SSF50129 5 143 4.71E-37 T 13-09-2016 IPR011032 GroES-like PMA3_RS06050 690faff38420c188871ea996bd6d4d81 334 Pfam PF16884 N-terminal domain of oxidoreductase 7 113 8.4E-38 T 13-09-2016 PMA3_RS06050 690faff38420c188871ea996bd6d4d81 334 SMART SM00829 19 332 1.6E-6 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS06050 690faff38420c188871ea996bd6d4d81 334 Gene3D G3DSA:3.90.180.10 2 141 6.5E-51 T 13-09-2016 IPR011032 GroES-like PMA3_RS03585 2c9679204358e54fb925abcc121f999b 163 Pfam PF13710 ACT domain 12 72 3.1E-15 T 13-09-2016 PMA3_RS03585 2c9679204358e54fb925abcc121f999b 163 Gene3D G3DSA:3.30.70.260 1 78 7.9E-35 T 13-09-2016 PMA3_RS03585 2c9679204358e54fb925abcc121f999b 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 4.1E-63 T 13-09-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS03585 2c9679204358e54fb925abcc121f999b 163 Gene3D G3DSA:3.30.70.1150 83 161 1.3E-29 T 13-09-2016 PMA3_RS03585 2c9679204358e54fb925abcc121f999b 163 SUPERFAMILY SSF55021 79 162 2.9E-26 T 13-09-2016 PMA3_RS03585 2c9679204358e54fb925abcc121f999b 163 SUPERFAMILY SSF55021 1 75 2.45E-21 T 13-09-2016 PMA3_RS03585 2c9679204358e54fb925abcc121f999b 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-37 T 13-09-2016 PMA3_RS03585 2c9679204358e54fb925abcc121f999b 163 PANTHER PTHR30239 1 159 7.6E-89 T 13-09-2016 PMA3_RS03585 2c9679204358e54fb925abcc121f999b 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 2.7E-26 T 13-09-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 PANTHER PTHR10169 1 530 0.0 T 13-09-2016 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 605 641 0.046 T 13-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 654 693 1.4E-4 T 13-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 Gene3D G3DSA:3.90.199.10 340 404 1.1E-102 T 13-09-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 Gene3D G3DSA:3.90.199.10 34 241 1.1E-102 T 13-09-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 PANTHER PTHR10169:SF30 1 530 0.0 T 13-09-2016 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 474 7.5E-131 T 13-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 750 32.904 T 13-09-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 SUPERFAMILY SSF101904 504 751 9.94E-52 T 13-09-2016 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 SUPERFAMILY SSF56719 35 490 2.22E-150 T 13-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 Gene3D G3DSA:3.30.1360.40 242 338 6.7E-22 T 13-09-2016 IPR024946 Arginine repressor C-terminal-like domain PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 Gene3D G3DSA:2.120.10.90 503 743 5.4E-25 T 13-09-2016 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 SMART SM00434 15 468 4.9E-226 T 13-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PMA3_RS01960 bb5da770ffca1667f6d89977271cd461 755 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 748 0.0 T 13-09-2016 PMA3_RS24270 70b631fad1176e0763acf6bf7ee8214d 404 Gene3D G3DSA:3.40.640.10 17 253 2.3E-92 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS24270 70b631fad1176e0763acf6bf7ee8214d 404 PIRSF PIRSF005572 2 384 2.6E-128 T 13-09-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PMA3_RS24270 70b631fad1176e0763acf6bf7ee8214d 404 PANTHER PTHR11601:SF45 4 404 9.3E-229 T 13-09-2016 PMA3_RS24270 70b631fad1176e0763acf6bf7ee8214d 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 52.353 T 13-09-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 PMA3_RS24270 70b631fad1176e0763acf6bf7ee8214d 404 Gene3D G3DSA:3.90.1150.10 254 374 9.1E-50 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS24270 70b631fad1176e0763acf6bf7ee8214d 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 13-09-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PMA3_RS24270 70b631fad1176e0763acf6bf7ee8214d 404 PANTHER PTHR11601 4 404 9.3E-229 T 13-09-2016 PMA3_RS24270 70b631fad1176e0763acf6bf7ee8214d 404 SUPERFAMILY SSF53383 5 390 5.3E-107 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS24270 70b631fad1176e0763acf6bf7ee8214d 404 Pfam PF00266 Aminotransferase class-V 5 368 2.3E-83 T 13-09-2016 IPR000192 Aminotransferase class V domain PMA3_RS24270 70b631fad1176e0763acf6bf7ee8214d 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 3.3E-227 T 13-09-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 PMA3_RS01820 e94b656b8a5fa1ff59072e10874bda62 585 SUPERFAMILY SSF53067 255 358 3.88E-12 T 13-09-2016 PMA3_RS01820 e94b656b8a5fa1ff59072e10874bda62 585 SUPERFAMILY SSF53067 22 84 3.88E-12 T 13-09-2016 PMA3_RS01820 e94b656b8a5fa1ff59072e10874bda62 585 SUPERFAMILY SSF53067 132 218 3.88E-12 T 13-09-2016 PMA3_RS01820 e94b656b8a5fa1ff59072e10874bda62 585 PANTHER PTHR34847 4 582 1.8E-140 T 13-09-2016 PMA3_RS01820 e94b656b8a5fa1ff59072e10874bda62 585 Pfam PF02543 Carbamoyltransferase N-terminus 5 354 4.2E-54 T 13-09-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 PMA3_RS01820 e94b656b8a5fa1ff59072e10874bda62 585 Pfam PF16861 Carbamoyltransferase C-terminus 406 575 1.4E-59 T 13-09-2016 IPR031730 Carbamoyltransferase, C-terminal PMA3_RS05085 212c2c5cbe8d4c85177618bafed5f8dc 880 PANTHER PTHR34697:SF2 23 870 2.3E-298 T 13-09-2016 PMA3_RS05085 212c2c5cbe8d4c85177618bafed5f8dc 880 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 566 852 6.1E-95 T 13-09-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal PMA3_RS05085 212c2c5cbe8d4c85177618bafed5f8dc 880 PANTHER PTHR34697 23 870 2.3E-298 T 13-09-2016 PMA3_RS05085 212c2c5cbe8d4c85177618bafed5f8dc 880 SUPERFAMILY SSF55729 675 850 7.84E-16 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS05085 212c2c5cbe8d4c85177618bafed5f8dc 880 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 37 328 4.3E-11 T 13-09-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PMA3_RS14890 67a85dcfd11091c970dad369ab653b8f 270 Gene3D G3DSA:1.10.12.10 212 269 2.1E-28 T 13-09-2016 IPR014748 Crontonase, C-terminal PMA3_RS14890 67a85dcfd11091c970dad369ab653b8f 270 PANTHER PTHR11941:SF43 3 268 1.0E-134 T 13-09-2016 PMA3_RS14890 67a85dcfd11091c970dad369ab653b8f 270 Gene3D G3DSA:3.90.226.10 3 211 2.0E-63 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS14890 67a85dcfd11091c970dad369ab653b8f 270 PANTHER PTHR11941 3 268 1.0E-134 T 13-09-2016 PMA3_RS14890 67a85dcfd11091c970dad369ab653b8f 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 268 1.6E-47 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS14890 67a85dcfd11091c970dad369ab653b8f 270 SUPERFAMILY SSF52096 3 268 2.72E-77 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 13-09-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 122 3.4E-20 T 13-09-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 PANTHER PTHR33910:SF1 1 122 1.9E-25 T 13-09-2016 PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 PRINTS PR01650 Bacterial translocase SecE signature 87 107 2.0E-25 T 13-09-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 PRINTS PR01650 Bacterial translocase SecE signature 63 83 2.0E-25 T 13-09-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 PRINTS PR01650 Bacterial translocase SecE signature 107 122 2.0E-25 T 13-09-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 PRINTS PR01650 Bacterial translocase SecE signature 42 63 2.0E-25 T 13-09-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 120 2.0E-19 T 13-09-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 PANTHER PTHR33910 1 122 1.9E-25 T 13-09-2016 PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 Gene3D G3DSA:1.20.5.1030 62 121 1.9E-24 T 13-09-2016 PMA3_RS27330 9ef1f88774edd573073aeb1636c9b64d 122 Hamap MF_00422 Protein translocase subunit SecE [secE]. 61 119 13.704 T 13-09-2016 IPR022943 Preprotein translocase subunit SecE PMA3_RS25275 e0dae240c62b0a81dfd0a1dde6aa3b1a 575 SUPERFAMILY SSF52540 369 569 1.25E-35 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25275 e0dae240c62b0a81dfd0a1dde6aa3b1a 575 Gene3D G3DSA:3.40.50.300 372 571 3.6E-37 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25275 e0dae240c62b0a81dfd0a1dde6aa3b1a 575 SMART SM00382 396 567 1.7E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25275 e0dae240c62b0a81dfd0a1dde6aa3b1a 575 Gene3D G3DSA:1.20.1560.10 20 348 1.5E-21 T 13-09-2016 PMA3_RS25275 e0dae240c62b0a81dfd0a1dde6aa3b1a 575 PANTHER PTHR11384:SF3 19 564 9.0E-220 T 13-09-2016 PMA3_RS25275 e0dae240c62b0a81dfd0a1dde6aa3b1a 575 Pfam PF00005 ABC transporter 387 521 1.8E-16 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS25275 e0dae240c62b0a81dfd0a1dde6aa3b1a 575 SUPERFAMILY SSF90123 37 349 9.55E-33 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS25275 e0dae240c62b0a81dfd0a1dde6aa3b1a 575 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS25275 e0dae240c62b0a81dfd0a1dde6aa3b1a 575 PANTHER PTHR11384 19 564 9.0E-220 T 13-09-2016 PMA3_RS25275 e0dae240c62b0a81dfd0a1dde6aa3b1a 575 Pfam PF06472 ABC transporter transmembrane region 2 14 302 6.9E-71 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS18625 1a42e254120f91136a6a27b1dd49ec73 310 Pfam PF13557 Putative MetA-pathway of phenol degradation 66 297 3.1E-16 T 13-09-2016 IPR025737 MetA-pathway of phenol degradation, putative PMA3_RS06880 ce9dfced247c68d4cefcc2b4cd4cc525 504 PANTHER PTHR34383 4 490 2.4E-259 T 13-09-2016 PMA3_RS06880 ce9dfced247c68d4cefcc2b4cd4cc525 504 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 233 4.2E-50 T 13-09-2016 IPR022488 Polyphosphate kinase-2-related PMA3_RS06880 ce9dfced247c68d4cefcc2b4cd4cc525 504 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 269 492 9.7E-93 T 13-09-2016 IPR022488 Polyphosphate kinase-2-related PMA3_RS06880 ce9dfced247c68d4cefcc2b4cd4cc525 504 SUPERFAMILY SSF52540 41 216 1.03E-13 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06880 ce9dfced247c68d4cefcc2b4cd4cc525 504 SUPERFAMILY SSF52540 302 490 4.02E-25 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06880 ce9dfced247c68d4cefcc2b4cd4cc525 504 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 491 2.1E-220 T 13-09-2016 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 PMA3_RS06880 ce9dfced247c68d4cefcc2b4cd4cc525 504 PANTHER PTHR34383:SF3 4 490 2.4E-259 T 13-09-2016 PMA3_RS06880 ce9dfced247c68d4cefcc2b4cd4cc525 504 Gene3D G3DSA:3.40.50.300 250 502 4.0E-102 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06880 ce9dfced247c68d4cefcc2b4cd4cc525 504 Gene3D G3DSA:3.40.50.300 1 241 2.1E-79 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22055 9e9bc6b97ac886025285ea66fad3995a 241 SMART SM00849 32 220 1.3E-29 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS22055 9e9bc6b97ac886025285ea66fad3995a 241 PANTHER PTHR11935:SF106 1 235 2.1E-71 T 13-09-2016 PMA3_RS22055 9e9bc6b97ac886025285ea66fad3995a 241 SUPERFAMILY SSF56281 11 238 2.1E-42 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS22055 9e9bc6b97ac886025285ea66fad3995a 241 PANTHER PTHR11935 1 235 2.1E-71 T 13-09-2016 PMA3_RS22055 9e9bc6b97ac886025285ea66fad3995a 241 Gene3D G3DSA:3.60.15.10 8 232 8.1E-35 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS22055 9e9bc6b97ac886025285ea66fad3995a 241 Pfam PF00753 Metallo-beta-lactamase superfamily 30 220 6.2E-20 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 13-09-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 Gene3D G3DSA:3.40.50.10490 158 232 2.0E-64 T 13-09-2016 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 Gene3D G3DSA:3.40.50.10490 23 99 2.0E-64 T 13-09-2016 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.7E-37 T 13-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.7E-37 T 13-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.7E-37 T 13-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.7E-37 T 13-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.7E-37 T 13-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.7E-37 T 13-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 SUPERFAMILY SSF52313 6 229 2.22E-95 T 13-09-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 Pfam PF00318 Ribosomal protein S2 9 224 3.7E-94 T 13-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.529 T 13-09-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 Gene3D G3DSA:1.10.287.610 100 152 1.4E-25 T 13-09-2016 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 13-09-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 3.3E-104 T 13-09-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PMA3_RS04825 9bfd0a2b0c4f53d29594ded1bbf94556 245 PANTHER PTHR12534 1 225 9.6E-117 T 13-09-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 SUPERFAMILY SSF51735 2 174 8.57E-54 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 145 161 - T 13-09-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 PANTHER PTHR32338:SF8 1 344 7.5E-182 T 13-09-2016 PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 344 1.7E-132 T 13-09-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 PANTHER PTHR32338 1 344 7.5E-182 T 13-09-2016 PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 142 1.2E-38 T 13-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 Gene3D G3DSA:3.30.360.10 159 312 3.3E-60 T 13-09-2016 PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 338 43.335 T 13-09-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 Gene3D G3DSA:3.40.50.720 1 158 3.5E-65 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 SUPERFAMILY SSF55347 150 312 5.49E-51 T 13-09-2016 PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 SMART SM00859 3 142 7.4E-66 T 13-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PMA3_RS27415 89ed5af2b2dca2183ea5a06fccb8ee5e 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 161 315 2.8E-17 T 13-09-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 SUPERFAMILY SSF81653 252 348 9.81E-23 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 197 751 3.1E-175 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 595 605 1.9E-24 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 449 463 1.9E-24 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 672 684 1.9E-24 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 667 1.9E-24 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 298 312 1.9E-24 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 Pfam PF00702 haloacid dehalogenase-like hydrolase 447 661 9.1E-40 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 Pfam PF00122 E1-E2 ATPase 218 440 2.1E-64 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 Gene3D G3DSA:3.40.1110.10 464 575 2.7E-12 T 13-09-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 548 733 1.3E-41 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 219 468 6.8E-38 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PRINTS PR00941 Cadmium-transporting ATPase signature 314 330 4.9E-12 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PRINTS PR00941 Cadmium-transporting ATPase signature 62 71 4.9E-12 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PRINTS PR00941 Cadmium-transporting ATPase signature 178 190 4.9E-12 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PRINTS PR00941 Cadmium-transporting ATPase signature 232 252 4.9E-12 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PRINTS PR00941 Cadmium-transporting ATPase signature 333 347 4.9E-12 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 SUPERFAMILY SSF56784 448 467 6.87E-55 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 SUPERFAMILY SSF56784 506 748 6.87E-55 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 SUPERFAMILY SSF81665 197 251 6.28E-17 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 SUPERFAMILY SSF81665 698 734 6.28E-17 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 SUPERFAMILY SSF81665 349 441 6.28E-17 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 Gene3D G3DSA:3.30.70.100 62 125 1.9E-8 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 Gene3D G3DSA:3.40.50.1000 576 717 3.7E-46 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 Gene3D G3DSA:3.40.50.1000 422 463 3.7E-46 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PANTHER PTHR24093:SF317 55 745 4.8E-258 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 PANTHER PTHR24093 55 745 4.8E-258 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 182 751 1.3E-119 T 13-09-2016 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 SUPERFAMILY SSF55008 58 125 6.45E-11 T 13-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 451 457 - T 13-09-2016 IPR018303 P-type ATPase, phosphorylation site PMA3_RS28730 22bc9d37665d9e704065ac1a4a7f21eb 754 Gene3D G3DSA:2.70.150.10 197 349 2.8E-26 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS01790 4e9baa240757ebd85cf7ef8b3606a346 374 PANTHER PTHR12526 1 55 7.9E-102 T 13-09-2016 PMA3_RS01790 4e9baa240757ebd85cf7ef8b3606a346 374 PANTHER PTHR12526:SF220 1 55 7.9E-102 T 13-09-2016 PMA3_RS01790 4e9baa240757ebd85cf7ef8b3606a346 374 SUPERFAMILY SSF53756 4 363 2.6E-60 T 13-09-2016 PMA3_RS01790 4e9baa240757ebd85cf7ef8b3606a346 374 Gene3D G3DSA:3.40.50.2000 154 348 9.8E-21 T 13-09-2016 PMA3_RS01790 4e9baa240757ebd85cf7ef8b3606a346 374 PANTHER PTHR12526:SF220 79 352 7.9E-102 T 13-09-2016 PMA3_RS01790 4e9baa240757ebd85cf7ef8b3606a346 374 Pfam PF00534 Glycosyl transferases group 1 187 348 1.2E-32 T 13-09-2016 IPR001296 Glycosyl transferase, family 1 PMA3_RS01790 4e9baa240757ebd85cf7ef8b3606a346 374 PANTHER PTHR12526 79 352 7.9E-102 T 13-09-2016 PMA3_RS25485 643d15260b23cfcaf4503e0613694cdf 133 SUPERFAMILY SSF89919 2 106 9.55E-35 T 13-09-2016 IPR023799 Ribosome-binding factor A domain PMA3_RS25485 643d15260b23cfcaf4503e0613694cdf 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 13-09-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 PMA3_RS25485 643d15260b23cfcaf4503e0613694cdf 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 99 2.0E-47 T 13-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 PMA3_RS25485 643d15260b23cfcaf4503e0613694cdf 133 Gene3D G3DSA:3.30.300.20 4 120 1.8E-40 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS25485 643d15260b23cfcaf4503e0613694cdf 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 2.7E-34 T 13-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 PMA3_RS25485 643d15260b23cfcaf4503e0613694cdf 133 PANTHER PTHR33515 1 133 1.8E-45 T 13-09-2016 PMA3_RS25485 643d15260b23cfcaf4503e0613694cdf 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 119 23.084 T 13-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 PMA3_RS25485 643d15260b23cfcaf4503e0613694cdf 133 Pfam PF02033 Ribosome-binding factor A 7 112 1.1E-31 T 13-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 SUPERFAMILY SSF52009 300 420 5.49E-28 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 620 635 8.5E-24 T 13-09-2016 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 467 486 8.5E-24 T 13-09-2016 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 673 685 8.5E-24 T 13-09-2016 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 637 652 8.5E-24 T 13-09-2016 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 SUPERFAMILY SSF51621 429 715 2.04E-102 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 SMART SM00065 17 164 7.7E-24 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 PANTHER PTHR22931:SF23 200 723 3.1E-278 T 13-09-2016 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 429 714 2.5E-98 T 13-09-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 620 638 - T 13-09-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 Gene3D G3DSA:1.10.274.10 204 307 1.4E-33 T 13-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 Gene3D G3DSA:3.30.450.40 1 162 3.9E-49 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 Gene3D G3DSA:3.20.20.60 430 740 3.0E-104 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 Pfam PF01590 GAF domain 17 152 2.4E-14 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 Pfam PF00391 PEP-utilising enzyme, mobile domain 327 399 7.4E-16 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 Pfam PF05524 PEP-utilising enzyme, N-terminal 180 301 4.9E-25 T 13-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 SUPERFAMILY SSF47831 204 316 4.84E-29 T 13-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 Gene3D G3DSA:3.50.30.10 308 429 2.6E-30 T 13-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 179 735 7.7E-134 T 13-09-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 PANTHER PTHR22931 200 723 3.1E-278 T 13-09-2016 PMA3_RS28760 997a3d78d6c562c183f843722acee92d 759 SUPERFAMILY SSF55781 2 158 1.09E-32 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 SUPERFAMILY SSF55174 320 396 1.5E-13 T 13-09-2016 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 Gene3D G3DSA:1.10.240.10 228 326 8.7E-34 T 13-09-2016 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 PANTHER PTHR11766 4 397 1.9E-225 T 13-09-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 310 1.4E-79 T 13-09-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 396 1.7E-119 T 13-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 SUPERFAMILY SSF52374 4 309 8.23E-100 T 13-09-2016 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 396 48.082 T 13-09-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 13-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 Gene3D G3DSA:3.10.290.10 327 396 1.9E-17 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 Gene3D G3DSA:3.40.50.620 10 227 9.2E-87 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.1E-25 T 13-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.1E-25 T 13-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.1E-25 T 13-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.1E-25 T 13-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PMA3_RS27395 f64b9de2e1856b2cf6496cb5c838f9a3 399 PANTHER PTHR11766:SF1 4 397 1.9E-225 T 13-09-2016 PMA3_RS17200 a8adb8484622f847d3d0f8b1cc8fec96 433 PANTHER PTHR13847:SF196 7 416 4.6E-50 T 13-09-2016 PMA3_RS17200 a8adb8484622f847d3d0f8b1cc8fec96 433 SUPERFAMILY SSF51905 350 400 1.55E-25 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17200 a8adb8484622f847d3d0f8b1cc8fec96 433 SUPERFAMILY SSF51905 26 254 1.55E-25 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17200 a8adb8484622f847d3d0f8b1cc8fec96 433 PANTHER PTHR13847 7 416 4.6E-50 T 13-09-2016 PMA3_RS17200 a8adb8484622f847d3d0f8b1cc8fec96 433 Pfam PF01266 FAD dependent oxidoreductase 27 387 1.5E-38 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS17200 a8adb8484622f847d3d0f8b1cc8fec96 433 Gene3D G3DSA:3.50.50.60 350 395 1.1E-30 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17200 a8adb8484622f847d3d0f8b1cc8fec96 433 Gene3D G3DSA:3.50.50.60 171 248 1.1E-30 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17200 a8adb8484622f847d3d0f8b1cc8fec96 433 Gene3D G3DSA:3.50.50.60 15 118 1.1E-30 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08065 1ff68b93b2061fcd6ae38f8669443e39 215 Gene3D G3DSA:1.10.10.10 3 96 6.0E-37 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08065 1ff68b93b2061fcd6ae38f8669443e39 215 Gene3D G3DSA:1.10.10.10 99 174 2.5E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08065 1ff68b93b2061fcd6ae38f8669443e39 215 SUPERFAMILY SSF46785 94 173 4.6E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08065 1ff68b93b2061fcd6ae38f8669443e39 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 14 213 27.597 T 13-09-2016 IPR007432 Protein of unknown function DUF480 PMA3_RS08065 1ff68b93b2061fcd6ae38f8669443e39 215 PANTHER PTHR38768 2 215 1.1E-72 T 13-09-2016 PMA3_RS08065 1ff68b93b2061fcd6ae38f8669443e39 215 Pfam PF04337 Protein of unknown function, DUF480 14 158 7.4E-53 T 13-09-2016 IPR007432 Protein of unknown function DUF480 PMA3_RS08065 1ff68b93b2061fcd6ae38f8669443e39 215 SUPERFAMILY SSF46785 12 91 2.45E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08065 1ff68b93b2061fcd6ae38f8669443e39 215 PANTHER PTHR38768:SF1 2 215 1.1E-72 T 13-09-2016 PMA3_RS23940 297ac12f235f9f9283445b2cc5e6c8cb 321 SUPERFAMILY SSF53448 1 227 3.86E-30 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS23940 297ac12f235f9f9283445b2cc5e6c8cb 321 PANTHER PTHR10859:SF81 1 318 3.9E-152 T 13-09-2016 PMA3_RS23940 297ac12f235f9f9283445b2cc5e6c8cb 321 Pfam PF00535 Glycosyl transferase family 2 4 164 3.5E-26 T 13-09-2016 IPR001173 Glycosyltransferase 2-like PMA3_RS23940 297ac12f235f9f9283445b2cc5e6c8cb 321 Gene3D G3DSA:3.90.550.10 1 167 4.0E-20 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS23940 297ac12f235f9f9283445b2cc5e6c8cb 321 PANTHER PTHR10859 1 318 3.9E-152 T 13-09-2016 PMA3_RS18370 5651bfab1f3f50b7339e4956bf380b51 205 PANTHER PTHR30086 2 199 8.9E-33 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS18370 5651bfab1f3f50b7339e4956bf380b51 205 PANTHER PTHR30086:SF13 2 199 8.9E-33 T 13-09-2016 PMA3_RS18370 5651bfab1f3f50b7339e4956bf380b51 205 Pfam PF01810 LysE type translocator 16 203 1.0E-28 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS03785 f27b822789792e0323d6fdff74cc2ca2 263 PANTHER PTHR21198:SF2 1 263 7.4E-100 T 13-09-2016 PMA3_RS03785 f27b822789792e0323d6fdff74cc2ca2 263 SUPERFAMILY SSF53681 5 107 1.01E-31 T 13-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03785 f27b822789792e0323d6fdff74cc2ca2 263 PANTHER PTHR21198 1 263 7.4E-100 T 13-09-2016 PMA3_RS03785 f27b822789792e0323d6fdff74cc2ca2 263 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 215 1.6E-35 T 13-09-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03785 f27b822789792e0323d6fdff74cc2ca2 263 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 13-09-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03785 f27b822789792e0323d6fdff74cc2ca2 263 Hamap MF_00258 Glutamate racemase [murI]. 4 255 36.967 T 13-09-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03785 f27b822789792e0323d6fdff74cc2ca2 263 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 13-09-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03785 f27b822789792e0323d6fdff74cc2ca2 263 Gene3D G3DSA:3.40.50.1860 2 173 5.9E-54 T 13-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03785 f27b822789792e0323d6fdff74cc2ca2 263 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 247 5.1E-69 T 13-09-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03785 f27b822789792e0323d6fdff74cc2ca2 263 SUPERFAMILY SSF53681 109 255 2.13E-41 T 13-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS18040 cd8fe3b010d4700dfabb4e892c3d0203 317 Gene3D G3DSA:3.40.190.10 248 316 8.4E-54 T 13-09-2016 PMA3_RS18040 cd8fe3b010d4700dfabb4e892c3d0203 317 Gene3D G3DSA:3.40.190.10 26 107 8.4E-54 T 13-09-2016 PMA3_RS18040 cd8fe3b010d4700dfabb4e892c3d0203 317 PANTHER PTHR30024 4 317 3.3E-111 T 13-09-2016 PMA3_RS18040 cd8fe3b010d4700dfabb4e892c3d0203 317 Gene3D G3DSA:3.40.190.10 116 247 2.0E-36 T 13-09-2016 PMA3_RS18040 cd8fe3b010d4700dfabb4e892c3d0203 317 PANTHER PTHR30024:SF5 4 317 3.3E-111 T 13-09-2016 PMA3_RS18040 cd8fe3b010d4700dfabb4e892c3d0203 317 SUPERFAMILY SSF53850 26 316 3.39E-75 T 13-09-2016 PMA3_RS18040 cd8fe3b010d4700dfabb4e892c3d0203 317 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 315 1.9E-113 T 13-09-2016 IPR011852 TRAP transporter solute receptor, TAXI family PMA3_RS18040 cd8fe3b010d4700dfabb4e892c3d0203 317 Pfam PF16868 NMT1-like family 31 315 1.0E-92 T 13-09-2016 IPR011852 TRAP transporter solute receptor, TAXI family PMA3_RS17250 78f275d18b43b298de5229c768ea90ce 502 Gene3D G3DSA:3.40.605.10 27 287 3.4E-101 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS17250 78f275d18b43b298de5229c768ea90ce 502 PANTHER PTHR11699:SF46 6 501 4.8E-230 T 13-09-2016 PMA3_RS17250 78f275d18b43b298de5229c768ea90ce 502 Pfam PF00171 Aldehyde dehydrogenase family 35 497 9.9E-175 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS17250 78f275d18b43b298de5229c768ea90ce 502 SUPERFAMILY SSF53720 24 500 1.7E-168 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS17250 78f275d18b43b298de5229c768ea90ce 502 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 273 280 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS17250 78f275d18b43b298de5229c768ea90ce 502 Gene3D G3DSA:3.40.309.10 288 472 7.3E-69 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS17250 78f275d18b43b298de5229c768ea90ce 502 PANTHER PTHR11699 6 501 4.8E-230 T 13-09-2016 PMA3_RS15430 0c0a71114b28ee4a4695925f164d4cc0 864 Gene3D G3DSA:2.170.270.10 741 863 1.8E-9 T 13-09-2016 PMA3_RS15430 0c0a71114b28ee4a4695925f164d4cc0 864 SMART SM00317 732 864 6.8E-6 T 13-09-2016 IPR001214 SET domain GO:0005515 PMA3_RS15430 0c0a71114b28ee4a4695925f164d4cc0 864 Pfam PF00856 SET domain 746 858 6.7E-5 T 13-09-2016 IPR001214 SET domain GO:0005515 PMA3_RS15430 0c0a71114b28ee4a4695925f164d4cc0 864 SUPERFAMILY SSF82199 741 861 4.71E-12 T 13-09-2016 PMA3_RS01350 73ad2f7f07e31979542445dc041ce4bf 235 SUPERFAMILY SSF75217 72 234 5.23E-35 T 13-09-2016 IPR029028 Alpha/beta knot methyltransferases PMA3_RS01350 73ad2f7f07e31979542445dc041ce4bf 235 Pfam PF04452 RNA methyltransferase 17 234 3.6E-42 T 13-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS01350 73ad2f7f07e31979542445dc041ce4bf 235 PANTHER PTHR30027 9 234 1.1E-41 T 13-09-2016 PMA3_RS01350 73ad2f7f07e31979542445dc041ce4bf 235 PIRSF PIRSF015601 1 235 2.9E-50 T 13-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS01350 73ad2f7f07e31979542445dc041ce4bf 235 PANTHER PTHR30027:SF3 9 234 1.1E-41 T 13-09-2016 PMA3_RS01350 73ad2f7f07e31979542445dc041ce4bf 235 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 11 232 2.6E-22 T 13-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS01350 73ad2f7f07e31979542445dc041ce4bf 235 Gene3D G3DSA:3.40.1280.10 2 234 2.9E-54 T 13-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 Pfam PF02867 Ribonucleotide reductase, barrel domain 371 906 8.0E-182 T 13-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 PANTHER PTHR11573:SF6 150 930 0.0 T 13-09-2016 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 294 365 4.4E-22 T 13-09-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 Pfam PF03477 ATP cone domain 33 129 3.1E-18 T 13-09-2016 IPR005144 ATP-cone domain PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 Pfam PF03477 ATP cone domain 149 233 1.6E-6 T 13-09-2016 IPR005144 ATP-cone domain PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 SUPERFAMILY SSF51998 370 810 1.46E-181 T 13-09-2016 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 SUPERFAMILY SSF51998 841 908 1.46E-181 T 13-09-2016 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 PANTHER PTHR11573 150 930 0.0 T 13-09-2016 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 751 772 - T 13-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 SUPERFAMILY SSF48168 154 369 1.83E-62 T 13-09-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 297 908 1.3E-214 T 13-09-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 657 679 7.1E-47 T 13-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 446 465 7.1E-47 T 13-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 619 642 7.1E-47 T 13-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 685 708 7.1E-47 T 13-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 582 593 7.1E-47 T 13-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 761 788 7.1E-47 T 13-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 Gene3D G3DSA:3.20.70.20 548 705 5.6E-82 T 13-09-2016 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 Gene3D G3DSA:3.20.70.20 867 908 5.6E-82 T 13-09-2016 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 Gene3D G3DSA:3.20.70.20 283 492 5.6E-82 T 13-09-2016 PMA3_RS05820 a7347709fdb3eada5caff3fb24de97ff 964 Gene3D G3DSA:3.20.70.20 761 806 5.6E-82 T 13-09-2016 PMA3_RS05800 c38663ee8536255bb992ca77065e3e50 135 PANTHER PTHR30435 2 135 3.0E-44 T 13-09-2016 PMA3_RS05800 c38663ee8536255bb992ca77065e3e50 135 PANTHER PTHR30435:SF12 2 135 3.0E-44 T 13-09-2016 PMA3_RS05800 c38663ee8536255bb992ca77065e3e50 135 Pfam PF00460 Flagella basal body rod protein 11 39 8.6E-8 T 13-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PMA3_RS05800 c38663ee8536255bb992ca77065e3e50 135 PIRSF PIRSF002889 1 135 9.5E-46 T 13-09-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PMA3_RS05800 c38663ee8536255bb992ca77065e3e50 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 13-09-2016 IPR019776 Flagellar basal body rod protein, conserved site PMA3_RS05800 c38663ee8536255bb992ca77065e3e50 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 133 2.3E-40 T 13-09-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 Pfam PF00571 CBS domain 344 389 2.5E-8 T 13-09-2016 IPR000644 CBS domain PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 Pfam PF00571 CBS domain 402 453 5.1E-4 T 13-09-2016 IPR000644 CBS domain PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 PANTHER PTHR10314:SF35 3 363 5.4E-133 T 13-09-2016 PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 SUPERFAMILY SSF54631 334 454 4.55E-18 T 13-09-2016 PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 303 9.0E-65 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 Gene3D G3DSA:3.40.50.1100 44 148 3.7E-36 T 13-09-2016 PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 Gene3D G3DSA:3.10.580.10 340 455 1.7E-18 T 13-09-2016 PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 13-09-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 Gene3D G3DSA:3.40.50.1100 154 321 2.2E-60 T 13-09-2016 PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 Gene3D G3DSA:3.40.50.1100 7 43 2.2E-60 T 13-09-2016 PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 SUPERFAMILY SSF53686 7 321 2.23E-91 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 SMART SM00116 344 392 1.2E-4 T 13-09-2016 IPR000644 CBS domain PMA3_RS16735 06481a01aa444dfbfd969c28bb9eca74 458 PANTHER PTHR10314 3 363 5.4E-133 T 13-09-2016 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 PRINTS PR00421 Thioredoxin family signature 77 88 1.5E-7 T 13-09-2016 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 PRINTS PR00421 Thioredoxin family signature 29 37 1.5E-7 T 13-09-2016 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 PRINTS PR00421 Thioredoxin family signature 37 46 1.5E-7 T 13-09-2016 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 Pfam PF14561 Tetratricopeptide repeat 201 290 2.0E-26 T 13-09-2016 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 PANTHER PTHR10438 12 114 3.3E-35 T 13-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 Gene3D G3DSA:1.25.40.10 204 290 1.7E-29 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 Gene3D G3DSA:1.25.40.10 120 202 3.4E-11 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 Gene3D G3DSA:3.40.30.10 5 112 5.0E-33 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 TIGRFAM TIGR01068 thioredoxin: thioredoxin 14 111 2.0E-30 T 13-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 ProSitePatterns PS00194 Thioredoxin family active site. 30 48 - T 13-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 SUPERFAMILY SSF52833 8 113 1.54E-34 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 SUPERFAMILY SSF48452 116 183 1.25E-8 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 SUPERFAMILY SSF48452 218 255 1.25E-8 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 Pfam PF00085 Thioredoxin 11 109 7.3E-27 T 13-09-2016 IPR013766 Thioredoxin domain GO:0045454 PMA3_RS26980 094d09774958f2c9af823cf8cd651bcb 290 Pfam PF14559 Tetratricopeptide repeat 130 196 2.6E-9 T 13-09-2016 PMA3_RS12485 eeb94c75dbab7b27ac02f91e7b87dfb3 187 SUPERFAMILY SSF55729 30 173 2.57E-15 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS12485 eeb94c75dbab7b27ac02f91e7b87dfb3 187 PANTHER PTHR33303:SF4 20 183 1.3E-40 T 13-09-2016 PMA3_RS12485 eeb94c75dbab7b27ac02f91e7b87dfb3 187 Pfam PF00583 Acetyltransferase (GNAT) family 94 170 3.6E-8 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS12485 eeb94c75dbab7b27ac02f91e7b87dfb3 187 Gene3D G3DSA:3.40.630.30 32 171 2.5E-13 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS12485 eeb94c75dbab7b27ac02f91e7b87dfb3 187 PANTHER PTHR33303 20 183 1.3E-40 T 13-09-2016 PMA3_RS24435 3c7b6ac8e727dcec1c6e21e7fb920be0 266 SUPERFAMILY SSF56281 37 253 1.02E-33 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS24435 3c7b6ac8e727dcec1c6e21e7fb920be0 266 Gene3D G3DSA:3.60.15.10 34 244 6.1E-32 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS24435 3c7b6ac8e727dcec1c6e21e7fb920be0 266 SMART SM00849 41 241 7.5E-14 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS24435 3c7b6ac8e727dcec1c6e21e7fb920be0 266 PANTHER PTHR23200 6 254 5.9E-46 T 13-09-2016 PMA3_RS24435 3c7b6ac8e727dcec1c6e21e7fb920be0 266 PANTHER PTHR23200:SF40 6 254 5.9E-46 T 13-09-2016 PMA3_RS24435 3c7b6ac8e727dcec1c6e21e7fb920be0 266 Pfam PF00753 Metallo-beta-lactamase superfamily 44 227 1.9E-17 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS26245 d710568a03b6aba5bf4ebc7c8a281855 317 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 130 276 1.6E-33 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS26245 d710568a03b6aba5bf4ebc7c8a281855 317 SMART SM00283 94 298 1.3E-10 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS26245 d710568a03b6aba5bf4ebc7c8a281855 317 Gene3D G3DSA:1.10.287.950 95 289 2.7E-41 T 13-09-2016 PMA3_RS26245 d710568a03b6aba5bf4ebc7c8a281855 317 SUPERFAMILY SSF58104 96 292 3.14E-45 T 13-09-2016 PMA3_RS26245 d710568a03b6aba5bf4ebc7c8a281855 317 PANTHER PTHR32089 98 278 9.8E-39 T 13-09-2016 PMA3_RS13140 1774b2a3bd374d6810076e621c62ec36 307 PANTHER PTHR23088 6 297 8.8E-102 T 13-09-2016 PMA3_RS13140 1774b2a3bd374d6810076e621c62ec36 307 Pfam PF00795 Carbon-nitrogen hydrolase 6 277 1.2E-50 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS13140 1774b2a3bd374d6810076e621c62ec36 307 ProSitePatterns PS00921 Nitrilases / cyanide hydratase active site signature. 161 174 - T 13-09-2016 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 PMA3_RS13140 1774b2a3bd374d6810076e621c62ec36 307 PANTHER PTHR23088:SF5 6 297 8.8E-102 T 13-09-2016 PMA3_RS13140 1774b2a3bd374d6810076e621c62ec36 307 Gene3D G3DSA:3.60.110.10 3 296 4.5E-69 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS13140 1774b2a3bd374d6810076e621c62ec36 307 SUPERFAMILY SSF56317 1 296 6.67E-70 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS30230 c15532a27eca22f7234f729d5ffce0d6 221 SUPERFAMILY SSF51735 10 214 2.46E-17 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30230 c15532a27eca22f7234f729d5ffce0d6 221 Pfam PF13460 NAD(P)H-binding 15 163 3.8E-15 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30230 c15532a27eca22f7234f729d5ffce0d6 221 Gene3D G3DSA:3.40.50.720 10 163 1.7E-19 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 SUPERFAMILY SSF47203 226 377 6.93E-42 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 SUPERFAMILY SSF56645 1 239 3.27E-70 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 Gene3D G3DSA:2.40.110.10 120 218 5.7E-34 T 13-09-2016 PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 PANTHER PTHR10909 1 375 1.1E-108 T 13-09-2016 PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 375 8.5E-40 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 Gene3D G3DSA:1.20.140.10 219 377 2.1E-49 T 13-09-2016 PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 2.9E-23 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 Gene3D G3DSA:1.10.540.10 1 119 2.7E-30 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 116 2.1E-25 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18710 11fe60f7f06aaceccbf80a17c1850efe 379 TIGRFAM TIGR03207 cyc_hxne_CoA_dh: cyclohexanecarboxyl-CoA dehydrogenase 6 375 2.2E-185 T 13-09-2016 IPR017620 Cyclohexanecarboxyl-CoA dehydrogenase PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 Gene3D G3DSA:3.40.50.2300 668 781 2.2E-23 T 13-09-2016 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 529 643 1.4E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 SMART SM00388 417 482 1.1E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 SMART SM00387 529 645 3.2E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 SUPERFAMILY SSF52172 667 782 1.85E-24 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 PANTHER PTHR24423:SF559 34 49 1.6E-116 T 13-09-2016 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 PANTHER PTHR24423:SF559 396 784 1.6E-116 T 13-09-2016 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 Gene3D G3DSA:3.30.565.10 487 645 6.5E-34 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 Pfam PF00512 His Kinase A (phospho-acceptor) domain 418 482 4.9E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 Gene3D G3DSA:1.10.287.130 409 477 1.5E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 Pfam PF00072 Response regulator receiver domain 671 779 8.4E-16 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 SUPERFAMILY SSF55874 471 640 1.83E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 SUPERFAMILY SSF47384 404 483 2.35E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 PANTHER PTHR24423 34 49 1.6E-116 T 13-09-2016 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 PANTHER PTHR24423 396 784 1.6E-116 T 13-09-2016 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 1.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 642 1.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 623 1.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 598 1.3E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 Pfam PF07695 7TM diverse intracellular signalling 183 385 5.0E-54 T 13-09-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 Pfam PF07696 7TMR-DISM extracellular 2 31 170 4.7E-38 T 13-09-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 PMA3_RS02745 5864a559975eb2a41abd65c0881ccd78 794 SMART SM00448 669 779 1.6E-16 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS11635 44ad30e727859a6adf22689daa98406f 139 Pfam PF01575 MaoC like domain 17 119 3.9E-8 T 13-09-2016 IPR002539 MaoC-like domain PMA3_RS11635 44ad30e727859a6adf22689daa98406f 139 SUPERFAMILY SSF54637 6 137 2.18E-20 T 13-09-2016 IPR029069 HotDog domain PMA3_RS11635 44ad30e727859a6adf22689daa98406f 139 Gene3D G3DSA:3.10.129.10 5 133 1.8E-17 T 13-09-2016 IPR029069 HotDog domain PMA3_RS02960 1c0aa439f681bcdb8e68219a3c150b2f 284 SUPERFAMILY SSF51735 111 281 2.37E-35 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS02960 1c0aa439f681bcdb8e68219a3c150b2f 284 PANTHER PTHR21089 3 275 3.3E-59 T 13-09-2016 PMA3_RS02960 1c0aa439f681bcdb8e68219a3c150b2f 284 SUPERFAMILY SSF53223 3 110 4.14E-27 T 13-09-2016 PMA3_RS02960 1c0aa439f681bcdb8e68219a3c150b2f 284 Gene3D G3DSA:3.40.192.10 3 115 1.8E-33 T 13-09-2016 PMA3_RS02960 1c0aa439f681bcdb8e68219a3c150b2f 284 PANTHER PTHR21089:SF1 3 275 3.3E-59 T 13-09-2016 PMA3_RS02960 1c0aa439f681bcdb8e68219a3c150b2f 284 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 6 277 26.884 T 13-09-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS02960 1c0aa439f681bcdb8e68219a3c150b2f 284 Gene3D G3DSA:3.40.50.720 116 281 6.7E-43 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS02960 1c0aa439f681bcdb8e68219a3c150b2f 284 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 98 7.1E-21 T 13-09-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS14305 87b67beb6147eadc7a80678dad32df9f 192 PIRSF PIRSF033318 3 190 1.3E-101 T 13-09-2016 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS14305 87b67beb6147eadc7a80678dad32df9f 192 SUPERFAMILY SSF51316 3 189 1.36E-52 T 13-09-2016 IPR011057 Mss4-like PMA3_RS14305 87b67beb6147eadc7a80678dad32df9f 192 Hamap MF_00723 Glutathione-dependent formaldehyde-activating enzyme [gfa]. 1 192 122.569 T 13-09-2016 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS14305 87b67beb6147eadc7a80678dad32df9f 192 TIGRFAM TIGR02820 formald_GSH: S-(hydroxymethyl)glutathione synthase 5 186 4.8E-102 T 13-09-2016 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS14305 87b67beb6147eadc7a80678dad32df9f 192 Gene3D G3DSA:3.90.1590.10 3 189 3.3E-55 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS14305 87b67beb6147eadc7a80678dad32df9f 192 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 48 114 2.7E-8 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS21400 2d038163fe06c51ef94f821f20f74cc5 70 SUPERFAMILY SSF54786 3 59 1.06E-15 T 13-09-2016 PMA3_RS21400 2d038163fe06c51ef94f821f20f74cc5 70 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 6 59 2.4E-17 T 13-09-2016 IPR012933 HicA mRNA interferase family GO:0003729 PMA3_RS21400 2d038163fe06c51ef94f821f20f74cc5 70 Gene3D G3DSA:3.30.920.30 2 59 6.5E-21 T 13-09-2016 PMA3_RS29485 4d5166745cdf17306dac97dd9248cf76 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.811 T 13-09-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS29485 4d5166745cdf17306dac97dd9248cf76 51 PANTHER PTHR15238 1 51 3.0E-23 T 13-09-2016 PMA3_RS29485 4d5166745cdf17306dac97dd9248cf76 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 51 9.3E-25 T 13-09-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS29485 4d5166745cdf17306dac97dd9248cf76 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 13-09-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS29485 4d5166745cdf17306dac97dd9248cf76 51 SUPERFAMILY SSF57829 1 49 2.93E-18 T 13-09-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 PMA3_RS29485 4d5166745cdf17306dac97dd9248cf76 51 Pfam PF00471 Ribosomal protein L33 4 49 3.1E-17 T 13-09-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS07275 4dc0eab613e569b3c049bdc9d7ab906c 256 SUPERFAMILY SSF52833 94 253 7.36E-39 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07275 4dc0eab613e569b3c049bdc9d7ab906c 256 Pfam PF13098 Thioredoxin-like domain 120 253 1.4E-16 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07275 4dc0eab613e569b3c049bdc9d7ab906c 256 PANTHER PTHR35272:SF2 1 256 3.0E-131 T 13-09-2016 PMA3_RS07275 4dc0eab613e569b3c049bdc9d7ab906c 256 Gene3D G3DSA:3.40.30.10 113 254 3.0E-36 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07275 4dc0eab613e569b3c049bdc9d7ab906c 256 PANTHER PTHR35272 1 256 3.0E-131 T 13-09-2016 PMA3_RS07275 4dc0eab613e569b3c049bdc9d7ab906c 256 Gene3D G3DSA:3.10.450.70 63 86 1.5E-4 T 13-09-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal PMA3_RS07275 4dc0eab613e569b3c049bdc9d7ab906c 256 SUPERFAMILY SSF54423 27 85 2.22E-20 T 13-09-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PMA3_RS29815 dfd02801fe343bf1b97cfbdbe7b57cf0 273 Gene3D G3DSA:3.40.190.10 112 229 5.3E-26 T 13-09-2016 PMA3_RS29815 dfd02801fe343bf1b97cfbdbe7b57cf0 273 SMART SM00062 35 270 8.0E-44 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS29815 dfd02801fe343bf1b97cfbdbe7b57cf0 273 SUPERFAMILY SSF53850 6 271 2.29E-55 T 13-09-2016 PMA3_RS29815 dfd02801fe343bf1b97cfbdbe7b57cf0 273 PANTHER PTHR18966 36 268 3.2E-31 T 13-09-2016 PMA3_RS29815 dfd02801fe343bf1b97cfbdbe7b57cf0 273 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 13-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PMA3_RS29815 dfd02801fe343bf1b97cfbdbe7b57cf0 273 Gene3D G3DSA:3.40.190.10 230 271 9.2E-33 T 13-09-2016 PMA3_RS29815 dfd02801fe343bf1b97cfbdbe7b57cf0 273 Gene3D G3DSA:3.40.190.10 32 111 9.2E-33 T 13-09-2016 PMA3_RS29815 dfd02801fe343bf1b97cfbdbe7b57cf0 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 268 2.2E-49 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS10970 532d6094182ca74e70b19de163aa6f17 309 PANTHER PTHR33711:SF4 1 309 5.8E-120 T 13-09-2016 PMA3_RS10970 532d6094182ca74e70b19de163aa6f17 309 Gene3D G3DSA:2.60.130.10 2 307 8.4E-107 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS10970 532d6094182ca74e70b19de163aa6f17 309 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 135 163 - T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS10970 532d6094182ca74e70b19de163aa6f17 309 Pfam PF00775 Dioxygenase 105 290 5.3E-70 T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS10970 532d6094182ca74e70b19de163aa6f17 309 Pfam PF04444 Catechol dioxygenase N terminus 27 95 2.2E-20 T 13-09-2016 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 PMA3_RS10970 532d6094182ca74e70b19de163aa6f17 309 SUPERFAMILY SSF49482 4 292 2.09E-95 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS10970 532d6094182ca74e70b19de163aa6f17 309 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 8 289 1.4E-138 T 13-09-2016 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1|UniPathway: UPA00157 PMA3_RS10970 532d6094182ca74e70b19de163aa6f17 309 PANTHER PTHR33711 1 309 5.8E-120 T 13-09-2016 PMA3_RS15445 85126a220c14eed61c8555f5679647f5 192 SUPERFAMILY SSF48695 23 124 2.68E-6 T 13-09-2016 IPR011031 Multihaem cytochrome PMA3_RS15445 85126a220c14eed61c8555f5679647f5 192 Gene3D G3DSA:1.10.3820.10 10 91 7.1E-4 T 13-09-2016 PMA3_RS19705 a2da8ff57b841ce98ddeeb7a2601123c 182 SUPERFAMILY SSF54862 35 162 4.6E-30 T 13-09-2016 PMA3_RS19705 a2da8ff57b841ce98ddeeb7a2601123c 182 Pfam PF12838 4Fe-4S dicluster domain 61 115 2.2E-11 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS19705 a2da8ff57b841ce98ddeeb7a2601123c 182 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 18 139 5.7E-53 T 13-09-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 PMA3_RS19705 a2da8ff57b841ce98ddeeb7a2601123c 182 PANTHER PTHR10849 1 182 1.2E-82 T 13-09-2016 PMA3_RS19705 a2da8ff57b841ce98ddeeb7a2601123c 182 Gene3D G3DSA:1.10.1060.10 12 128 8.5E-20 T 13-09-2016 PMA3_RS19705 a2da8ff57b841ce98ddeeb7a2601123c 182 PANTHER PTHR10849:SF13 1 182 1.2E-82 T 13-09-2016 PMA3_RS19705 a2da8ff57b841ce98ddeeb7a2601123c 182 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 2 152 28.493 T 13-09-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 PMA3_RS19705 a2da8ff57b841ce98ddeeb7a2601123c 182 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS19705 a2da8ff57b841ce98ddeeb7a2601123c 182 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS01625 f31ddee21943381740b5028ed26bfd25 779 SUPERFAMILY SSF82866 191 395 4.84E-18 T 13-09-2016 PMA3_RS01625 f31ddee21943381740b5028ed26bfd25 779 SUPERFAMILY SSF82866 640 763 5.62E-16 T 13-09-2016 PMA3_RS01625 f31ddee21943381740b5028ed26bfd25 779 Pfam PF03176 MMPL family 124 395 8.1E-5 T 13-09-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PMA3_RS01625 f31ddee21943381740b5028ed26bfd25 779 Gene3D G3DSA:1.20.1640.10 235 396 4.1E-12 T 13-09-2016 PMA3_RS01625 f31ddee21943381740b5028ed26bfd25 779 Gene3D G3DSA:1.20.1640.10 630 762 7.2E-9 T 13-09-2016 PMA3_RS15050 4a3c0b41e085e626978ebe86ca8c0c4d 91 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 3 89 6.2E-32 T 13-09-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 PMA3_RS15050 4a3c0b41e085e626978ebe86ca8c0c4d 91 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 68 89 4.4E-23 T 13-09-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 PMA3_RS15050 4a3c0b41e085e626978ebe86ca8c0c4d 91 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 45 61 4.4E-23 T 13-09-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 PMA3_RS15050 4a3c0b41e085e626978ebe86ca8c0c4d 91 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 4 22 4.4E-23 T 13-09-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 PMA3_RS15050 4a3c0b41e085e626978ebe86ca8c0c4d 91 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 9 89 1.0E-22 T 13-09-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 PMA3_RS15050 4a3c0b41e085e626978ebe86ca8c0c4d 91 SUPERFAMILY SSF47345 1 89 1.44E-31 T 13-09-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 PMA3_RS15050 4a3c0b41e085e626978ebe86ca8c0c4d 91 Gene3D G3DSA:1.10.1200.20 1 89 4.2E-33 T 13-09-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 PMA3_RS07365 163fc0ee5b4698ce60843ab8468a3756 152 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 127 8.4E-7 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS07365 163fc0ee5b4698ce60843ab8468a3756 152 Gene3D G3DSA:3.10.180.10 11 132 3.2E-26 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS07365 163fc0ee5b4698ce60843ab8468a3756 152 PANTHER PTHR34109:SF1 6 143 4.2E-43 T 13-09-2016 PMA3_RS07365 163fc0ee5b4698ce60843ab8468a3756 152 PANTHER PTHR34109 6 143 4.2E-43 T 13-09-2016 PMA3_RS07365 163fc0ee5b4698ce60843ab8468a3756 152 SUPERFAMILY SSF54593 12 148 2.28E-32 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS21795 fcb0b2e9fae9778af732e44e33315dd1 436 PANTHER PTHR33308:SF3 267 424 1.9E-36 T 13-09-2016 PMA3_RS21795 fcb0b2e9fae9778af732e44e33315dd1 436 Pfam PF10135 Rod binding protein 54 105 9.5E-16 T 13-09-2016 IPR019301 Flagellar protein FlgJ, N-terminal PMA3_RS21795 fcb0b2e9fae9778af732e44e33315dd1 436 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 283 420 9.1E-22 T 13-09-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PMA3_RS21795 fcb0b2e9fae9778af732e44e33315dd1 436 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 191 420 5.4E-61 T 13-09-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- PMA3_RS21795 fcb0b2e9fae9778af732e44e33315dd1 436 SMART SM00047 266 432 1.9E-31 T 13-09-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PMA3_RS21795 fcb0b2e9fae9778af732e44e33315dd1 436 PANTHER PTHR33308 267 424 1.9E-36 T 13-09-2016 PMA3_RS18695 40f3a655686e1498d257a15adb87a477 555 SUPERFAMILY SSF56801 23 546 4.97E-136 T 13-09-2016 PMA3_RS18695 40f3a655686e1498d257a15adb87a477 555 Gene3D G3DSA:3.40.50.980 25 208 2.5E-32 T 13-09-2016 PMA3_RS18695 40f3a655686e1498d257a15adb87a477 555 Gene3D G3DSA:2.30.38.10 370 442 1.4E-19 T 13-09-2016 PMA3_RS18695 40f3a655686e1498d257a15adb87a477 555 PANTHER PTHR24095 24 546 5.9E-138 T 13-09-2016 PMA3_RS18695 40f3a655686e1498d257a15adb87a477 555 Pfam PF00501 AMP-binding enzyme 32 448 4.4E-86 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS18695 40f3a655686e1498d257a15adb87a477 555 Gene3D G3DSA:3.30.300.30 443 544 1.3E-27 T 13-09-2016 PMA3_RS18695 40f3a655686e1498d257a15adb87a477 555 Gene3D G3DSA:3.40.50.980 209 362 7.1E-34 T 13-09-2016 PMA3_RS18695 40f3a655686e1498d257a15adb87a477 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 203 214 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS18695 40f3a655686e1498d257a15adb87a477 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 457 534 1.4E-14 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.7E-5 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00097 Anthranilate synthase component II signature 339 352 1.7E-5 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.7E-5 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 SMART SM01097 3 133 1.5E-90 T 13-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 SUPERFAMILY SSF52021 4 141 1.44E-56 T 13-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 47.11 T 13-09-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 4.9E-39 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 4.9E-39 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 4.9E-39 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 4.9E-39 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 4.9E-39 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 Gene3D G3DSA:3.40.50.880 154 376 8.0E-81 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 Gene3D G3DSA:3.50.30.20 3 143 6.3E-61 T 13-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 SUPERFAMILY SSF52317 153 376 8.99E-63 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 Pfam PF00117 Glutamine amidotransferase class-I 197 372 8.5E-45 T 13-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PANTHER PTHR11405 187 378 2.7E-239 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PANTHER PTHR11405 3 170 2.7E-239 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 4.1E-52 T 13-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 3.1E-143 T 13-09-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 7.2E-11 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 7.2E-11 T 13-09-2016 PMA3_RS25565 af96dde1679b1abfdc0036f5a23b55fc 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 7.2E-11 T 13-09-2016 PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 SUPERFAMILY SSF46785 5 64 6.97E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 Gene3D G3DSA:1.10.10.10 5 53 7.6E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 Pfam PF01037 Lrp/AsnC ligand binding domain 73 136 3.9E-9 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 Gene3D G3DSA:3.30.70.920 59 136 3.8E-11 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 PANTHER PTHR30154:SF2 1 136 1.7E-30 T 13-09-2016 PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 PANTHER PTHR30154 1 136 1.7E-30 T 13-09-2016 PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 4.4E-11 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 4.4E-11 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 4.4E-11 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 SMART SM00344 6 111 1.1E-19 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 Pfam PF13404 AsnC-type helix-turn-helix domain 6 47 5.6E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS26340 4391cf1f7c28b944874fe52c99a23538 155 SUPERFAMILY SSF54909 68 148 3.75E-12 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 Gene3D G3DSA:1.10.10.10 3 86 3.8E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 PANTHER PTHR30537:SF16 1 295 6.9E-121 T 13-09-2016 PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.0E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.0E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.0E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.7E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 SUPERFAMILY SSF53850 95 296 2.9E-26 T 13-09-2016 PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 Gene3D G3DSA:3.40.190.10 164 264 1.5E-32 T 13-09-2016 PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 PANTHER PTHR30537 1 295 6.9E-121 T 13-09-2016 PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 SUPERFAMILY SSF46785 4 86 5.24E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00210 e1ad1942c562496b0ad1316d7f3648f5 305 Pfam PF03466 LysR substrate binding domain 96 293 3.0E-22 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS10115 87d48b21fed6e865b6fcb4961f7c7fda 446 PANTHER PTHR11662:SF3 2 433 1.4E-116 T 13-09-2016 PMA3_RS10115 87d48b21fed6e865b6fcb4961f7c7fda 446 SUPERFAMILY SSF103473 13 428 5.23E-75 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS10115 87d48b21fed6e865b6fcb4961f7c7fda 446 Gene3D G3DSA:1.20.1250.20 249 435 2.4E-15 T 13-09-2016 PMA3_RS10115 87d48b21fed6e865b6fcb4961f7c7fda 446 Pfam PF07690 Major Facilitator Superfamily 32 392 4.7E-36 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS10115 87d48b21fed6e865b6fcb4961f7c7fda 446 PANTHER PTHR11662 2 433 1.4E-116 T 13-09-2016 PMA3_RS10115 87d48b21fed6e865b6fcb4961f7c7fda 446 Gene3D G3DSA:1.20.1250.20 26 222 1.5E-40 T 13-09-2016 PMA3_RS01405 4c5829d80b625f7d28d4138a57162e0f 277 PANTHER PTHR38664:SF1 10 157 3.0E-19 T 13-09-2016 PMA3_RS01405 4c5829d80b625f7d28d4138a57162e0f 277 PANTHER PTHR38664 10 157 3.0E-19 T 13-09-2016 PMA3_RS01405 4c5829d80b625f7d28d4138a57162e0f 277 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 17 136 9.8E-47 T 13-09-2016 IPR008769 Poly granule associated PMA3_RS01405 4c5829d80b625f7d28d4138a57162e0f 277 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 9 135 9.1E-46 T 13-09-2016 IPR008769 Poly granule associated PMA3_RS00770 e8ebd326830fd3d705d2e37c08ddd454 325 SMART SM00062 26 243 5.2E-9 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS00770 e8ebd326830fd3d705d2e37c08ddd454 325 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 27 324 3.2E-135 T 13-09-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 PMA3_RS00770 e8ebd326830fd3d705d2e37c08ddd454 325 PANTHER PTHR30024 7 323 2.6E-80 T 13-09-2016 PMA3_RS00770 e8ebd326830fd3d705d2e37c08ddd454 325 Pfam PF09084 NMT1/THI5 like 40 244 7.6E-24 T 13-09-2016 IPR015168 SsuA/THI5-like PMA3_RS00770 e8ebd326830fd3d705d2e37c08ddd454 325 PANTHER PTHR30024:SF17 7 323 2.6E-80 T 13-09-2016 PMA3_RS00770 e8ebd326830fd3d705d2e37c08ddd454 325 SUPERFAMILY SSF53850 27 246 1.65E-45 T 13-09-2016 PMA3_RS00770 e8ebd326830fd3d705d2e37c08ddd454 325 Gene3D G3DSA:3.40.190.10 109 229 1.1E-22 T 13-09-2016 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 26 782 0.0 T 13-09-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 SUPERFAMILY SSF56003 148 780 7.33E-203 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 Gene3D G3DSA:3.30.365.10 183 289 9.7E-33 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 Gene3D G3DSA:3.30.365.10 367 458 6.9E-87 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 Gene3D G3DSA:3.30.365.10 625 780 6.9E-87 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 168 710 1.8E-206 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 Gene3D G3DSA:3.30.365.10 148 182 1.5E-24 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 Gene3D G3DSA:3.30.365.10 291 366 1.5E-24 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 40 146 5.3E-22 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 SMART SM01008 40 147 9.5E-41 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 PANTHER PTHR11908 24 785 0.0 T 13-09-2016 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 PANTHER PTHR11908:SF66 24 785 0.0 T 13-09-2016 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 SUPERFAMILY SSF54665 21 148 3.79E-38 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 Gene3D G3DSA:3.30.365.10 459 615 7.0E-56 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS20345 f7d45832c0f6f1cc903f4c84f251321a 799 Gene3D G3DSA:3.90.1170.50 26 147 3.4E-37 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS10950 342fea974b2eae913f3a3ed3c390aede 299 Gene3D G3DSA:3.20.20.370 37 257 3.2E-30 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS10950 342fea974b2eae913f3a3ed3c390aede 299 SUPERFAMILY SSF88713 43 256 7.23E-30 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS10950 342fea974b2eae913f3a3ed3c390aede 299 PANTHER PTHR10587 45 247 4.1E-17 T 13-09-2016 PMA3_RS10950 342fea974b2eae913f3a3ed3c390aede 299 Pfam PF01522 Polysaccharide deacetylase 39 172 5.4E-16 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS08295 c1911f1ea12024cdb1087d49a0c3576d 361 SUPERFAMILY SSF56634 35 353 3.01E-94 T 13-09-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS08295 c1911f1ea12024cdb1087d49a0c3576d 361 Pfam PF00199 Catalase 68 354 1.4E-26 T 13-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS08295 c1911f1ea12024cdb1087d49a0c3576d 361 SMART SM01060 30 361 5.4E-7 T 13-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS08295 c1911f1ea12024cdb1087d49a0c3576d 361 Gene3D G3DSA:2.40.180.10 47 353 1.2E-76 T 13-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS08295 c1911f1ea12024cdb1087d49a0c3576d 361 PANTHER PTHR11465 2 349 3.5E-101 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS08295 c1911f1ea12024cdb1087d49a0c3576d 361 PIRSF PIRSF000296 17 349 4.5E-114 T 13-09-2016 IPR024168 Catalase, SrpA-type, predicted PMA3_RS08295 c1911f1ea12024cdb1087d49a0c3576d 361 PANTHER PTHR11465:SF16 2 349 3.5E-101 T 13-09-2016 PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 PANTHER PTHR11695:SF560 131 374 6.3E-214 T 13-09-2016 PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 PANTHER PTHR11695:SF560 18 111 6.3E-214 T 13-09-2016 PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 2.2E-223 T 13-09-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 SMART SM00829 13 370 6.4E-4 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 PANTHER PTHR11695 131 374 6.3E-214 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 PANTHER PTHR11695 18 111 6.3E-214 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 Pfam PF00107 Zinc-binding dehydrogenase 200 329 8.1E-25 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 Gene3D G3DSA:3.90.180.10 4 192 2.3E-69 T 13-09-2016 IPR011032 GroES-like PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 Gene3D G3DSA:3.40.50.720 193 312 7.5E-42 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 13-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 SUPERFAMILY SSF50129 3 186 7.37E-73 T 13-09-2016 IPR011032 GroES-like PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 155 3.3E-25 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 SUPERFAMILY SSF50129 321 372 8.71E-11 T 13-09-2016 IPR011032 GroES-like PMA3_RS19140 8e02e0abcb4694b2d3995cf04bb80fb8 374 SUPERFAMILY SSF51735 163 336 1.49E-45 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04225 95290f8f4e86f3d05b4832d1161a3167 152 Pfam PF00583 Acetyltransferase (GNAT) family 77 142 2.9E-12 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS04225 95290f8f4e86f3d05b4832d1161a3167 152 PANTHER PTHR23091 17 148 1.8E-16 T 13-09-2016 PMA3_RS04225 95290f8f4e86f3d05b4832d1161a3167 152 Gene3D G3DSA:3.40.630.30 17 147 2.6E-22 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS04225 95290f8f4e86f3d05b4832d1161a3167 152 SUPERFAMILY SSF55729 9 148 5.83E-23 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19100 9b6d88a180ee7678239bf2b4ac7568b1 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS19100 9b6d88a180ee7678239bf2b4ac7568b1 506 PANTHER PTHR11699 1 506 0.0 T 13-09-2016 PMA3_RS19100 9b6d88a180ee7678239bf2b4ac7568b1 506 Gene3D G3DSA:3.40.605.10 18 269 1.5E-91 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS19100 9b6d88a180ee7678239bf2b4ac7568b1 506 Gene3D G3DSA:3.40.309.10 270 469 1.0E-62 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS19100 9b6d88a180ee7678239bf2b4ac7568b1 506 Pfam PF00171 Aldehyde dehydrogenase family 32 493 3.4E-164 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS19100 9b6d88a180ee7678239bf2b4ac7568b1 506 SUPERFAMILY SSF53720 12 497 2.36E-162 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS19100 9b6d88a180ee7678239bf2b4ac7568b1 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS19100 9b6d88a180ee7678239bf2b4ac7568b1 506 PANTHER PTHR11699:SF97 1 506 0.0 T 13-09-2016 PMA3_RS07935 4e58fd964564f385429a4e274f6f9277 273 SUPERFAMILY SSF51430 5 261 3.01E-81 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS07935 4e58fd964564f385429a4e274f6f9277 273 Pfam PF00248 Aldo/keto reductase family 14 259 1.2E-56 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS07935 4e58fd964564f385429a4e274f6f9277 273 Gene3D G3DSA:3.20.20.100 6 262 5.9E-80 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS07935 4e58fd964564f385429a4e274f6f9277 273 PRINTS PR00069 Aldo-keto reductase signature 195 219 1.1E-18 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS07935 4e58fd964564f385429a4e274f6f9277 273 PRINTS PR00069 Aldo-keto reductase signature 38 62 1.1E-18 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS07935 4e58fd964564f385429a4e274f6f9277 273 PRINTS PR00069 Aldo-keto reductase signature 124 141 1.1E-18 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS07935 4e58fd964564f385429a4e274f6f9277 273 PRINTS PR00069 Aldo-keto reductase signature 94 112 1.1E-18 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS07935 4e58fd964564f385429a4e274f6f9277 273 PANTHER PTHR11732:SF98 1 273 2.8E-115 T 13-09-2016 PMA3_RS07935 4e58fd964564f385429a4e274f6f9277 273 PANTHER PTHR11732 1 273 2.8E-115 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS06220 90cf04ab4aeff5dd01f6fd5e355de8c2 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 124 187 9.1E-9 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS06220 90cf04ab4aeff5dd01f6fd5e355de8c2 220 PANTHER PTHR18901 5 216 1.5E-68 T 13-09-2016 PMA3_RS06220 90cf04ab4aeff5dd01f6fd5e355de8c2 220 PANTHER PTHR18901:SF40 5 216 1.5E-68 T 13-09-2016 PMA3_RS06220 90cf04ab4aeff5dd01f6fd5e355de8c2 220 Gene3D G3DSA:1.10.150.240 24 75 1.9E-11 T 13-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PMA3_RS06220 90cf04ab4aeff5dd01f6fd5e355de8c2 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 181 8.9E-11 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS06220 90cf04ab4aeff5dd01f6fd5e355de8c2 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 187 1.0E-32 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS06220 90cf04ab4aeff5dd01f6fd5e355de8c2 220 Gene3D G3DSA:3.40.50.1000 76 218 1.3E-42 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS06220 90cf04ab4aeff5dd01f6fd5e355de8c2 220 SUPERFAMILY SSF56784 6 216 2.23E-59 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 Pfam PF00258 Flavodoxin 387 510 4.9E-25 T 13-09-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 Gene3D G3DSA:3.40.50.80 708 841 3.7E-38 T 13-09-2016 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 SUPERFAMILY SSF52343 699 842 6.16E-36 T 13-09-2016 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 Gene3D G3DSA:2.40.30.10 547 581 1.4E-6 T 13-09-2016 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 Gene3D G3DSA:2.40.30.10 643 707 1.4E-6 T 13-09-2016 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 PANTHER PTHR19384 339 842 1.2E-97 T 13-09-2016 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 Gene3D G3DSA:3.40.50.360 378 521 5.1E-38 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 Pfam PF03929 PepSY-associated TM region 7 361 3.9E-59 T 13-09-2016 IPR005625 PepSY-associated TM protein PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 Pfam PF00175 Oxidoreductase NAD-binding domain 711 816 8.6E-14 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 SUPERFAMILY SSF52218 385 522 1.7E-37 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 PRINTS PR00369 Flavodoxin signature 386 399 2.4E-7 T 13-09-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 PRINTS PR00369 Flavodoxin signature 465 475 2.4E-7 T 13-09-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 PRINTS PR00369 Flavodoxin signature 434 445 2.4E-7 T 13-09-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 747 758 5.5E-13 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 710 729 5.5E-13 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 646 653 5.5E-13 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 571 581 5.5E-13 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 801 809 5.5E-13 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 778 794 5.5E-13 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS25410 11c296e26328c965d6608400ca7b5bf2 842 SUPERFAMILY SSF63380 529 701 9.53E-26 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS02225 c74a6ec2460041d7d5cd6069a4fd5035 427 Pfam PF01266 FAD dependent oxidoreductase 29 380 1.1E-53 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS02225 c74a6ec2460041d7d5cd6069a4fd5035 427 Gene3D G3DSA:3.50.50.60 171 251 1.3E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02225 c74a6ec2460041d7d5cd6069a4fd5035 427 Gene3D G3DSA:3.50.50.60 16 118 1.3E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02225 c74a6ec2460041d7d5cd6069a4fd5035 427 Gene3D G3DSA:3.50.50.60 344 394 1.3E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02225 c74a6ec2460041d7d5cd6069a4fd5035 427 PANTHER PTHR13847:SF190 7 395 3.3E-169 T 13-09-2016 PMA3_RS02225 c74a6ec2460041d7d5cd6069a4fd5035 427 SUPERFAMILY SSF51905 28 252 5.83E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02225 c74a6ec2460041d7d5cd6069a4fd5035 427 SUPERFAMILY SSF51905 344 397 5.83E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02225 c74a6ec2460041d7d5cd6069a4fd5035 427 PANTHER PTHR13847 7 395 3.3E-169 T 13-09-2016 PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 SUPERFAMILY SSF51735 10 250 5.2E-75 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 246 2.6E-55 T 13-09-2016 PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.8E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.8E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 5.3E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 5.3E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 5.3E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.3E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 5.3E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 5.3E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 Gene3D G3DSA:3.40.50.720 5 249 1.5E-77 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 PANTHER PTHR24322 15 144 9.4E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS26320 e30170ba8ee5be18704e908b2be4c08f 252 PANTHER PTHR24322 160 191 9.4E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS30090 061c78703c9aeee68e5806c530b3a352 133 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 5 115 17.165 T 13-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PMA3_RS30090 061c78703c9aeee68e5806c530b3a352 133 Gene3D G3DSA:3.30.230.10 4 114 1.4E-30 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS30090 061c78703c9aeee68e5806c530b3a352 133 SUPERFAMILY SSF54211 5 114 2.15E-28 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS30090 061c78703c9aeee68e5806c530b3a352 133 PANTHER PTHR33992 1 117 2.6E-34 T 13-09-2016 PMA3_RS30090 061c78703c9aeee68e5806c530b3a352 133 Pfam PF00825 Ribonuclease P 5 112 1.7E-29 T 13-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PMA3_RS30090 061c78703c9aeee68e5806c530b3a352 133 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 114 1.2E-24 T 13-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PMA3_RS30090 061c78703c9aeee68e5806c530b3a352 133 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 15 101 4.0E-30 T 13-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PMA3_RS03240 369c8e93b24a213444b827edb645e327 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS03240 369c8e93b24a213444b827edb645e327 157 Pfam PF13633 Prokaryotic N-terminal methylation site 6 31 2.0E-9 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS03240 369c8e93b24a213444b827edb645e327 157 SUPERFAMILY SSF54523 8 107 5.26E-13 T 13-09-2016 PMA3_RS03240 369c8e93b24a213444b827edb645e327 157 Gene3D G3DSA:3.30.700.10 8 43 6.1E-4 T 13-09-2016 PMA3_RS03240 369c8e93b24a213444b827edb645e327 157 Pfam PF12019 Type II transport protein GspH 46 147 4.3E-9 T 13-09-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PMA3_RS03240 369c8e93b24a213444b827edb645e327 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.4E-7 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 Gene3D G3DSA:1.10.3860.10 5 409 9.9E-105 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 PANTHER PTHR11958:SF49 1 424 5.3E-190 T 13-09-2016 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 Pfam PF00375 Sodium:dicarboxylate symporter family 12 405 7.4E-103 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 2.2E-30 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 2.2E-30 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 2.2E-30 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 2.2E-30 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 2.2E-30 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 2.2E-30 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 149 171 2.2E-30 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 PANTHER PTHR11958 1 424 5.3E-190 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19025 83c9a85183e2cb77ae50188607b0933d 435 SUPERFAMILY SSF118215 12 406 1.83E-109 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 Pfam PF00108 Thiolase, N-terminal domain 7 275 6.4E-47 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 Gene3D G3DSA:3.40.47.10 213 287 1.1E-47 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 Gene3D G3DSA:3.40.47.10 7 126 1.1E-47 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 SUPERFAMILY SSF53901 7 282 5.51E-55 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 PANTHER PTHR18919:SF5 2 425 6.7E-181 T 13-09-2016 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 PANTHER PTHR18919 2 425 6.7E-181 T 13-09-2016 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 Gene3D G3DSA:3.40.47.10 289 424 1.8E-42 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 Gene3D G3DSA:3.40.47.10 169 212 1.8E-42 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 Pfam PF02803 Thiolase, C-terminal domain 284 425 4.1E-30 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 SUPERFAMILY SSF53901 286 425 6.19E-29 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 424 9.8E-115 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS02660 a4e27fb585befe2161b1b7f529f70073 425 PIRSF PIRSF000429 1 425 4.5E-99 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 SUPERFAMILY SSF52821 395 482 7.07E-8 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 Pfam PF02926 THUMP domain 55 166 1.6E-17 T 13-09-2016 IPR004114 THUMP domain GO:0003723 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 Gene3D G3DSA:3.40.250.10 391 481 9.4E-8 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 179 370 6.4E-60 T 13-09-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 371 8.2E-100 T 13-09-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 484 199.636 T 13-09-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 SMART SM00981 77 167 4.7E-21 T 13-09-2016 IPR004114 THUMP domain GO:0003723 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 385 483 2.6E-35 T 13-09-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 SUPERFAMILY SSF52402 182 374 1.63E-37 T 13-09-2016 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 PANTHER PTHR14911 3 418 3.4E-224 T 13-09-2016 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 PANTHER PTHR14911:SF15 3 418 3.4E-224 T 13-09-2016 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 SUPERFAMILY SSF143437 1 175 3.49E-44 T 13-09-2016 PMA3_RS01190 ff3f624238f7420055774a7a5a2700ed 484 Gene3D G3DSA:3.40.50.620 175 335 1.5E-31 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 92 200 2.6E-12 T 13-09-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 97 199 2.4E-10 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 Gene3D G3DSA:3.40.50.1000 96 226 8.5E-41 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 Gene3D G3DSA:3.40.50.1000 14 29 8.5E-41 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 113 126 1.2E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 1.2E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 13 24 1.2E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 1.2E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 13 231 35.417 T 13-09-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 PANTHER PTHR18901 14 227 3.7E-73 T 13-09-2016 PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 199 1.8E-34 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 SUPERFAMILY SSF56784 13 226 5.12E-55 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 Gene3D G3DSA:1.10.150.240 30 95 2.3E-22 T 13-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 PANTHER PTHR18901:SF14 14 227 3.7E-73 T 13-09-2016 PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 16 225 5.5E-64 T 13-09-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 PMA3_RS27490 c0f1bb8b9da27215a8d8c623e984b3a5 272 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 115 194 5.7E-8 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 Gene3D G3DSA:3.40.50.300 101 322 1.1E-77 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 SMART SM00490 368 449 6.6E-30 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 SUPERFAMILY SSF52540 181 466 3.86E-71 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 Pfam PF00271 Helicase conserved C-terminal domain 340 449 6.9E-28 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 105 487 52.461 T 13-09-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 PANTHER PTHR24031 94 478 1.0E-170 T 13-09-2016 PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 261 269 - T 13-09-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 SMART SM00487 125 332 2.1E-51 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 PANTHER PTHR24031:SF261 94 478 1.0E-170 T 13-09-2016 PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 Gene3D G3DSA:3.40.50.300 323 478 2.8E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04260 322b24ac7f1c737e9dd2d09f06f857ae 495 Pfam PF00270 DEAD/DEAH box helicase 130 305 4.8E-48 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS22570 3dd9bd23ade991967d28dcfe91d065d6 273 Pfam PF08668 HDOD domain 23 202 1.0E-46 T 13-09-2016 IPR013976 Metal-dependent hydrolase HDOD PMA3_RS22570 3dd9bd23ade991967d28dcfe91d065d6 273 PANTHER PTHR33525:SF2 1 232 5.2E-85 T 13-09-2016 PMA3_RS22570 3dd9bd23ade991967d28dcfe91d065d6 273 PANTHER PTHR33525 1 232 5.2E-85 T 13-09-2016 PMA3_RS22570 3dd9bd23ade991967d28dcfe91d065d6 273 SUPERFAMILY SSF109604 10 257 6.75E-55 T 13-09-2016 PMA3_RS22570 3dd9bd23ade991967d28dcfe91d065d6 273 Gene3D G3DSA:1.10.3150.10 4 258 5.3E-61 T 13-09-2016 IPR013976 Metal-dependent hydrolase HDOD PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 4.2E-81 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 4.2E-81 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 4.2E-81 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 4.2E-81 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 4.2E-81 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 4.2E-81 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 4.2E-81 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.735 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 SUPERFAMILY SSF51735 123 282 1.31E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 4.4E-39 T 13-09-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 SUPERFAMILY SSF53223 1 122 1.15E-39 T 13-09-2016 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 PANTHER PTHR10025 1 284 1.4E-168 T 13-09-2016 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 Gene3D G3DSA:3.40.50.720 141 264 1.1E-48 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 Gene3D G3DSA:3.40.192.10 7 140 1.8E-50 T 13-09-2016 PMA3_RS08120 2459bb1be4ed2ba1b7d43471d48037e7 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 4.0E-66 T 13-09-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.1E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.1E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 2.6E-56 T 13-09-2016 PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 SUPERFAMILY SSF51735 6 256 3.6E-77 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.6E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.6E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 194 0.0065 T 13-09-2016 PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PANTHER PTHR24322 153 184 1.7E-50 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 PANTHER PTHR24322 11 137 1.7E-50 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10465 0bbfff735fc504b34fba906c3be03c4d 257 Gene3D G3DSA:3.40.50.720 4 256 3.7E-78 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS07485 395d7a78d01f150fb644af7f736735a8 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 8 176 4.9E-56 T 13-09-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 PMA3_RS07485 395d7a78d01f150fb644af7f736735a8 182 PANTHER PTHR11776 7 177 3.0E-61 T 13-09-2016 PMA3_RS07485 395d7a78d01f150fb644af7f736735a8 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 8 177 33.841 T 13-09-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 PMA3_RS07485 395d7a78d01f150fb644af7f736735a8 182 SUPERFAMILY SSF53271 7 177 1.02E-48 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS07485 395d7a78d01f150fb644af7f736735a8 182 Gene3D G3DSA:3.40.50.2020 10 178 2.0E-56 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS07485 395d7a78d01f150fb644af7f736735a8 182 PANTHER PTHR11776:SF0 7 177 3.0E-61 T 13-09-2016 PMA3_RS07485 395d7a78d01f150fb644af7f736735a8 182 Pfam PF00156 Phosphoribosyl transferase domain 47 157 3.3E-11 T 13-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PMA3_RS08795 f51266a9cd0ca151988582ad430dd954 282 PANTHER PTHR11624 9 278 1.1E-72 T 13-09-2016 IPR033247 Transketolase family PMA3_RS08795 f51266a9cd0ca151988582ad430dd954 282 PANTHER PTHR11624:SF86 9 278 1.1E-72 T 13-09-2016 PMA3_RS08795 f51266a9cd0ca151988582ad430dd954 282 Gene3D G3DSA:3.40.50.970 8 277 2.4E-84 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS08795 f51266a9cd0ca151988582ad430dd954 282 SUPERFAMILY SSF52518 11 276 2.38E-77 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS08795 f51266a9cd0ca151988582ad430dd954 282 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 18 268 3.5E-41 T 13-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PMA3_RS12445 9284b097a6ba3479aa2390584281f659 480 Pfam PF03773 Predicted permease 12 442 1.6E-66 T 13-09-2016 IPR005524 Predicted permease DUF318 PMA3_RS12445 9284b097a6ba3479aa2390584281f659 480 PANTHER PTHR34184 291 443 4.1E-81 T 13-09-2016 PMA3_RS12445 9284b097a6ba3479aa2390584281f659 480 PANTHER PTHR34184:SF3 291 443 4.1E-81 T 13-09-2016 PMA3_RS12445 9284b097a6ba3479aa2390584281f659 480 PANTHER PTHR34184 14 189 4.1E-81 T 13-09-2016 PMA3_RS12445 9284b097a6ba3479aa2390584281f659 480 PANTHER PTHR34184:SF3 14 189 4.1E-81 T 13-09-2016 PMA3_RS17335 dccecbbfa6fc023b50c282fc6efce937 308 SUPERFAMILY SSF52402 18 145 5.09E-14 T 13-09-2016 PMA3_RS17335 dccecbbfa6fc023b50c282fc6efce937 308 Gene3D G3DSA:3.40.50.620 142 301 2.6E-25 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS17335 dccecbbfa6fc023b50c282fc6efce937 308 PANTHER PTHR31964:SF41 247 301 8.3E-14 T 13-09-2016 PMA3_RS17335 dccecbbfa6fc023b50c282fc6efce937 308 SUPERFAMILY SSF52402 154 301 2.86E-24 T 13-09-2016 PMA3_RS17335 dccecbbfa6fc023b50c282fc6efce937 308 Gene3D G3DSA:3.40.50.620 17 141 3.0E-12 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS17335 dccecbbfa6fc023b50c282fc6efce937 308 PANTHER PTHR31964 247 301 8.3E-14 T 13-09-2016 PMA3_RS17335 dccecbbfa6fc023b50c282fc6efce937 308 PANTHER PTHR31964 1 88 8.3E-14 T 13-09-2016 PMA3_RS17335 dccecbbfa6fc023b50c282fc6efce937 308 Pfam PF00582 Universal stress protein family 173 301 7.5E-19 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS17335 dccecbbfa6fc023b50c282fc6efce937 308 Pfam PF00582 Universal stress protein family 19 145 2.2E-7 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS17335 dccecbbfa6fc023b50c282fc6efce937 308 PANTHER PTHR31964:SF41 1 88 8.3E-14 T 13-09-2016 PMA3_RS29085 d473bbb63a6ff0d296b23aad8c3fb768 449 PIRSF PIRSF002808 5 448 5.8E-175 T 13-09-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS29085 d473bbb63a6ff0d296b23aad8c3fb768 449 Pfam PF07690 Major Facilitator Superfamily 34 400 8.4E-50 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS29085 d473bbb63a6ff0d296b23aad8c3fb768 449 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 4.7E-156 T 13-09-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS29085 d473bbb63a6ff0d296b23aad8c3fb768 449 Gene3D G3DSA:1.20.1250.20 21 224 4.9E-51 T 13-09-2016 PMA3_RS29085 d473bbb63a6ff0d296b23aad8c3fb768 449 PANTHER PTHR11662 1 434 4.3E-235 T 13-09-2016 PMA3_RS29085 d473bbb63a6ff0d296b23aad8c3fb768 449 SUPERFAMILY SSF103473 11 437 3.01E-84 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS29085 d473bbb63a6ff0d296b23aad8c3fb768 449 Gene3D G3DSA:1.20.1250.20 246 436 3.1E-44 T 13-09-2016 PMA3_RS29085 d473bbb63a6ff0d296b23aad8c3fb768 449 PANTHER PTHR11662:SF141 1 434 4.3E-235 T 13-09-2016 PMA3_RS29085 d473bbb63a6ff0d296b23aad8c3fb768 449 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 13-09-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 PMA3_RS29085 d473bbb63a6ff0d296b23aad8c3fb768 449 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 434 2.7E-235 T 13-09-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 PMA3_RS22250 3a18acd37825aaef484f2d20a6a9bd7c 312 PANTHER PTHR12366:SF25 18 249 3.5E-117 T 13-09-2016 PMA3_RS22250 3a18acd37825aaef484f2d20a6a9bd7c 312 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 75 228 1.1E-46 T 13-09-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 PMA3_RS22250 3a18acd37825aaef484f2d20a6a9bd7c 312 Gene3D G3DSA:2.60.120.330 131 228 8.4E-15 T 13-09-2016 IPR027443 Isopenicillin N synthase-like PMA3_RS22250 3a18acd37825aaef484f2d20a6a9bd7c 312 SUPERFAMILY SSF51197 106 238 1.92E-16 T 13-09-2016 PMA3_RS22250 3a18acd37825aaef484f2d20a6a9bd7c 312 PANTHER PTHR12366 18 249 3.5E-117 T 13-09-2016 PMA3_RS22635 ab69c7749c5504ea2ec8ac4e294ec91d 221 Pfam PF09347 Domain of unknown function (DUF1989) 28 194 1.7E-66 T 13-09-2016 IPR018959 Domain of unknown function DUF1989 PMA3_RS22635 ab69c7749c5504ea2ec8ac4e294ec91d 221 PANTHER PTHR31527:SF0 13 221 8.2E-63 T 13-09-2016 PMA3_RS22635 ab69c7749c5504ea2ec8ac4e294ec91d 221 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 23 220 1.3E-102 T 13-09-2016 IPR017791 Urea carboxylase-associated protein 1 PMA3_RS22635 ab69c7749c5504ea2ec8ac4e294ec91d 221 PANTHER PTHR31527 13 221 8.2E-63 T 13-09-2016 PMA3_RS21200 833e6bb82630af7993f7cb902ec2dde5 392 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 93 126 2.4E-6 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS21200 833e6bb82630af7993f7cb902ec2dde5 392 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 151 185 1.0E-6 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS21200 833e6bb82630af7993f7cb902ec2dde5 392 Gene3D G3DSA:2.120.10.30 35 321 6.6E-7 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS21200 833e6bb82630af7993f7cb902ec2dde5 392 SUPERFAMILY SSF101898 29 322 3.66E-5 T 13-09-2016 PMA3_RS21200 833e6bb82630af7993f7cb902ec2dde5 392 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 150 191 3.2E-10 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS21200 833e6bb82630af7993f7cb902ec2dde5 392 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 91 129 2.0E-6 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS21200 833e6bb82630af7993f7cb902ec2dde5 392 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 205 247 5.7E-10 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS21200 833e6bb82630af7993f7cb902ec2dde5 392 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 312 350 3.4E-4 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS25420 638aa7f8f36bbd7a3889019cb33ede19 313 PANTHER PTHR10584 3 303 4.8E-111 T 13-09-2016 PMA3_RS25420 638aa7f8f36bbd7a3889019cb33ede19 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 13-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PMA3_RS25420 638aa7f8f36bbd7a3889019cb33ede19 313 PIRSF PIRSF000535 1 310 1.8E-90 T 13-09-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 PMA3_RS25420 638aa7f8f36bbd7a3889019cb33ede19 313 PANTHER PTHR10584:SF170 3 303 4.8E-111 T 13-09-2016 PMA3_RS25420 638aa7f8f36bbd7a3889019cb33ede19 313 Gene3D G3DSA:3.40.1190.20 34 309 1.3E-81 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS25420 638aa7f8f36bbd7a3889019cb33ede19 313 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 4 308 6.2E-106 T 13-09-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 PMA3_RS25420 638aa7f8f36bbd7a3889019cb33ede19 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 13-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PMA3_RS25420 638aa7f8f36bbd7a3889019cb33ede19 313 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 308 4.7E-105 T 13-09-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 PMA3_RS25420 638aa7f8f36bbd7a3889019cb33ede19 313 Pfam PF00294 pfkB family carbohydrate kinase 16 289 9.4E-50 T 13-09-2016 IPR011611 Carbohydrate kinase PfkB PMA3_RS25420 638aa7f8f36bbd7a3889019cb33ede19 313 SUPERFAMILY SSF53613 4 290 1.56E-68 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS10745 57b0d4b4bba075229bcfa4a97479b01e 311 Pfam PF03466 LysR substrate binding domain 100 308 9.3E-33 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS10745 57b0d4b4bba075229bcfa4a97479b01e 311 Gene3D G3DSA:3.40.190.10 190 275 5.9E-14 T 13-09-2016 PMA3_RS10745 57b0d4b4bba075229bcfa4a97479b01e 311 Gene3D G3DSA:1.10.10.10 14 96 5.4E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10745 57b0d4b4bba075229bcfa4a97479b01e 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 3.6E-13 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10745 57b0d4b4bba075229bcfa4a97479b01e 311 PANTHER PTHR30126 13 307 4.0E-62 T 13-09-2016 PMA3_RS10745 57b0d4b4bba075229bcfa4a97479b01e 311 SUPERFAMILY SSF46785 13 116 7.07E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10745 57b0d4b4bba075229bcfa4a97479b01e 311 Gene3D G3DSA:3.40.190.10 101 189 1.8E-15 T 13-09-2016 PMA3_RS10745 57b0d4b4bba075229bcfa4a97479b01e 311 SUPERFAMILY SSF53850 101 309 2.59E-34 T 13-09-2016 PMA3_RS10745 57b0d4b4bba075229bcfa4a97479b01e 311 PANTHER PTHR30126:SF3 13 307 4.0E-62 T 13-09-2016 PMA3_RS26275 e1fe282c5f0a90b322c9dc97a513c8e0 394 PIRSF PIRSF000138 1 377 6.4E-130 T 13-09-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 PMA3_RS26275 e1fe282c5f0a90b322c9dc97a513c8e0 394 PANTHER PTHR10578 9 374 3.6E-140 T 13-09-2016 PMA3_RS26275 e1fe282c5f0a90b322c9dc97a513c8e0 394 PANTHER PTHR10578:SF76 9 374 3.6E-140 T 13-09-2016 PMA3_RS26275 e1fe282c5f0a90b322c9dc97a513c8e0 394 Pfam PF01070 FMN-dependent dehydrogenase 16 374 7.2E-121 T 13-09-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 PMA3_RS26275 e1fe282c5f0a90b322c9dc97a513c8e0 394 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 13-09-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 PMA3_RS26275 e1fe282c5f0a90b322c9dc97a513c8e0 394 Gene3D G3DSA:3.20.20.70 7 374 2.4E-118 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS26275 e1fe282c5f0a90b322c9dc97a513c8e0 394 SUPERFAMILY SSF51395 6 373 2.81E-93 T 13-09-2016 PMA3_RS01720 42f0188c99ca487338f6a3d19c26599e 644 PANTHER PTHR32089 158 644 2.7E-141 T 13-09-2016 PMA3_RS01720 42f0188c99ca487338f6a3d19c26599e 644 SMART SM00283 381 642 9.2E-77 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS01720 42f0188c99ca487338f6a3d19c26599e 644 Pfam PF02743 Cache domain 52 274 1.1E-21 T 13-09-2016 IPR033479 Double Cache domain 1 PMA3_RS01720 42f0188c99ca487338f6a3d19c26599e 644 PANTHER PTHR32089:SF39 158 644 2.7E-141 T 13-09-2016 PMA3_RS01720 42f0188c99ca487338f6a3d19c26599e 644 Gene3D G3DSA:3.30.450.20 172 290 1.6E-17 T 13-09-2016 PMA3_RS01720 42f0188c99ca487338f6a3d19c26599e 644 Gene3D G3DSA:1.10.287.950 396 612 1.2E-57 T 13-09-2016 PMA3_RS01720 42f0188c99ca487338f6a3d19c26599e 644 Pfam PF00672 HAMP domain 294 360 4.7E-16 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS01720 42f0188c99ca487338f6a3d19c26599e 644 SUPERFAMILY SSF58104 334 643 6.67E-77 T 13-09-2016 PMA3_RS01720 42f0188c99ca487338f6a3d19c26599e 644 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 435 641 4.6E-47 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS01720 42f0188c99ca487338f6a3d19c26599e 644 SMART SM00304 312 366 1.5E-12 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 PANTHER PTHR24960:SF45 3 390 7.6E-182 T 13-09-2016 PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 PANTHER PTHR24960 3 390 7.6E-182 T 13-09-2016 PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 Gene3D G3DSA:1.10.1060.10 221 278 6.6E-8 T 13-09-2016 PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 39 468 5.9E-176 T 13-09-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 SUPERFAMILY SSF54862 172 344 1.0E-30 T 13-09-2016 PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 SUPERFAMILY SSF54862 103 125 1.0E-30 T 13-09-2016 PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 Pfam PF13746 4Fe-4S dicluster domain 217 322 1.1E-44 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 352 468 3.5E-29 T 13-09-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 Pfam PF12801 4Fe-4S binding domain 96 125 2.1E-5 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 Gene3D G3DSA:2.60.40.10 352 469 2.4E-34 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 Gene3D G3DSA:3.30.70.20 279 334 6.9E-8 T 13-09-2016 PMA3_RS07520 2cd04a867860ce04e2ce7a693b5bd6e9 471 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 270 281 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS00075 a31e36bcd5591757b42264e717dca4e1 359 PANTHER PTHR35457 232 340 8.2E-67 T 13-09-2016 PMA3_RS00075 a31e36bcd5591757b42264e717dca4e1 359 PANTHER PTHR35457 1 46 8.2E-67 T 13-09-2016 PMA3_RS00075 a31e36bcd5591757b42264e717dca4e1 359 PANTHER PTHR35457:SF1 62 209 8.2E-67 T 13-09-2016 PMA3_RS00075 a31e36bcd5591757b42264e717dca4e1 359 PANTHER PTHR35457 62 209 8.2E-67 T 13-09-2016 PMA3_RS00075 a31e36bcd5591757b42264e717dca4e1 359 Pfam PF02628 Cytochrome oxidase assembly protein 7 316 4.3E-84 T 13-09-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 PMA3_RS00075 a31e36bcd5591757b42264e717dca4e1 359 PANTHER PTHR35457:SF1 232 340 8.2E-67 T 13-09-2016 PMA3_RS00075 a31e36bcd5591757b42264e717dca4e1 359 PANTHER PTHR35457:SF1 1 46 8.2E-67 T 13-09-2016 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 Pfam PF01103 Surface antigen 447 791 1.6E-93 T 13-09-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 PANTHER PTHR12815 680 791 4.0E-256 T 13-09-2016 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 23 791 1.2E-260 T 13-09-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 PANTHER PTHR12815 3 663 4.0E-256 T 13-09-2016 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 Pfam PF07244 Surface antigen variable number repeat 265 343 8.0E-14 T 13-09-2016 IPR010827 Surface antigen variable number GO:0019867 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 Pfam PF07244 Surface antigen variable number repeat 92 171 9.3E-14 T 13-09-2016 IPR010827 Surface antigen variable number GO:0019867 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 Pfam PF07244 Surface antigen variable number repeat 175 262 1.4E-17 T 13-09-2016 IPR010827 Surface antigen variable number GO:0019867 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 Pfam PF07244 Surface antigen variable number repeat 347 420 1.8E-13 T 13-09-2016 IPR010827 Surface antigen variable number GO:0019867 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 Gene3D G3DSA:2.40.160.50 404 791 2.0E-24 T 13-09-2016 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 PANTHER PTHR12815:SF11 3 663 4.0E-256 T 13-09-2016 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 PANTHER PTHR12815:SF11 680 791 4.0E-256 T 13-09-2016 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 791 25.503 T 13-09-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PMA3_RS04865 a77ef829e193a8f2fcdf0ed14c96684b 791 PIRSF PIRSF006076 1 791 7.4E-261 T 13-09-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PMA3_RS07180 b6f492286dbe67395079dbcfe4068205 179 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 9 170 1.7E-85 T 13-09-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 PMA3_RS07180 b6f492286dbe67395079dbcfe4068205 179 SMART SM00852 15 159 5.7E-29 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS07180 b6f492286dbe67395079dbcfe4068205 179 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 73 86 - T 13-09-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 PMA3_RS07180 b6f492286dbe67395079dbcfe4068205 179 PANTHER PTHR10192:SF18 5 174 3.3E-94 T 13-09-2016 PMA3_RS07180 b6f492286dbe67395079dbcfe4068205 179 Pfam PF00994 Probable molybdopterin binding domain 15 156 3.1E-31 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS07180 b6f492286dbe67395079dbcfe4068205 179 SUPERFAMILY SSF53218 9 169 1.83E-45 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS07180 b6f492286dbe67395079dbcfe4068205 179 PANTHER PTHR10192 5 174 3.3E-94 T 13-09-2016 PMA3_RS07180 b6f492286dbe67395079dbcfe4068205 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 1.3E-30 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS07180 b6f492286dbe67395079dbcfe4068205 179 PIRSF PIRSF006443 1 167 1.0E-63 T 13-09-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 PMA3_RS07180 b6f492286dbe67395079dbcfe4068205 179 Gene3D G3DSA:3.40.980.10 9 171 3.7E-46 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS05210 5834c04be1b98230f509bd69bdcf7c12 158 Pfam PF02810 SEC-C motif 136 153 1.5E-8 T 13-09-2016 IPR004027 SEC-C motif PMA3_RS05210 5834c04be1b98230f509bd69bdcf7c12 158 SUPERFAMILY SSF54427 25 130 1.14E-31 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS05210 5834c04be1b98230f509bd69bdcf7c12 158 PANTHER PTHR33747 1 154 3.3E-22 T 13-09-2016 PMA3_RS05210 5834c04be1b98230f509bd69bdcf7c12 158 SUPERFAMILY SSF103642 133 155 1.18E-6 T 13-09-2016 PMA3_RS05210 5834c04be1b98230f509bd69bdcf7c12 158 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 2 129 26.905 T 13-09-2016 IPR023006 Uncharacterised protein family UPF0225 PMA3_RS05210 5834c04be1b98230f509bd69bdcf7c12 158 Gene3D G3DSA:3.10.450.50 2 153 4.0E-52 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 Pfam PF00072 Response regulator receiver domain 3 115 1.1E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 SMART SM00421 145 202 7.5E-15 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 Gene3D G3DSA:3.40.50.2300 1 118 1.4E-34 T 13-09-2016 PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 Gene3D G3DSA:1.10.10.10 119 209 2.5E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 1.4E-14 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 SUPERFAMILY SSF52172 1 129 1.42E-34 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 SUPERFAMILY SSF46894 136 208 6.8E-17 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 SMART SM00448 1 114 1.0E-33 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.6E-9 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.6E-9 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.6E-9 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 PANTHER PTHR26402:SF210 1 210 1.3E-58 T 13-09-2016 PMA3_RS15700 e06e50ddd1e461978911ddb5d0dde3ce 212 PANTHER PTHR26402 1 210 1.3E-58 T 13-09-2016 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 PIRSF PIRSF000538 4 498 8.6E-118 T 13-09-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 255 1.3E-70 T 13-09-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 Gene3D G3DSA:3.30.420.40 2 256 1.8E-56 T 13-09-2016 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 380 - T 13-09-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 SUPERFAMILY SSF53067 6 257 5.61E-62 T 13-09-2016 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 266 446 2.0E-24 T 13-09-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 SUPERFAMILY SSF53067 257 496 1.77E-52 T 13-09-2016 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 PANTHER PTHR10196 1 493 7.7E-159 T 13-09-2016 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 TIGRFAM TIGR01312 XylB: xylulokinase 8 494 8.9E-180 T 13-09-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 PANTHER PTHR10196:SF67 1 493 7.7E-159 T 13-09-2016 PMA3_RS13370 d1263d39613768ed20b4faa741c78da8 498 Gene3D G3DSA:3.30.420.40 259 495 2.9E-38 T 13-09-2016 PMA3_RS11640 32d6a869c8b566be923e51049b6e6a5a 392 SUPERFAMILY SSF53901 265 378 8.64E-10 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11640 32d6a869c8b566be923e51049b6e6a5a 392 SUPERFAMILY SSF53901 8 236 2.55E-26 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11640 32d6a869c8b566be923e51049b6e6a5a 392 Gene3D G3DSA:3.40.47.10 206 233 9.4E-12 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11640 32d6a869c8b566be923e51049b6e6a5a 392 Gene3D G3DSA:3.40.47.10 24 116 9.4E-12 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11640 32d6a869c8b566be923e51049b6e6a5a 392 PANTHER PTHR18919 5 381 7.7E-107 T 13-09-2016 PMA3_RS11640 32d6a869c8b566be923e51049b6e6a5a 392 PANTHER PTHR18919:SF108 5 381 7.7E-107 T 13-09-2016 PMA3_RS11640 32d6a869c8b566be923e51049b6e6a5a 392 PIRSF PIRSF000429 5 344 2.5E-13 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 Gene3D G3DSA:3.30.70.141 1 138 1.1E-56 T 13-09-2016 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.5E-53 T 13-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 SMART SM00562 3 140 3.1E-83 T 13-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 13-09-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 PANTHER PTHR11349 1 138 1.2E-69 T 13-09-2016 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.176 T 13-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 SUPERFAMILY SSF54919 1 138 3.93E-55 T 13-09-2016 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 7.9E-40 T 13-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 7.9E-40 T 13-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 7.9E-40 T 13-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 7.9E-40 T 13-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS24235 e9cf67e01aa11f4b3c25bf1beb433d04 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 7.9E-40 T 13-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 13-09-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PANTHER PTHR10422:SF26 33 616 0.0 T 13-09-2016 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.4E-93 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 SUPERFAMILY SSF81442 43 559 2.22E-169 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 Gene3D G3DSA:1.20.210.10 39 591 2.2E-181 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 649 0.0 T 13-09-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 5.2E-130 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS24555 1a7ee55956672199e7f16e095f78aea5 676 PANTHER PTHR10422 33 616 0.0 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS05170 129bb72971e604f4b2d7459184876732 236 Gene3D G3DSA:1.10.3720.10 20 228 9.4E-32 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS05170 129bb72971e604f4b2d7459184876732 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 227 1.2E-15 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS05170 129bb72971e604f4b2d7459184876732 236 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 5.7E-16 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS05170 129bb72971e604f4b2d7459184876732 236 SUPERFAMILY SSF161098 17 220 1.28E-32 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS05170 129bb72971e604f4b2d7459184876732 236 PANTHER PTHR30450:SF5 1 236 5.0E-136 T 13-09-2016 PMA3_RS05170 129bb72971e604f4b2d7459184876732 236 PANTHER PTHR30450 1 236 5.0E-136 T 13-09-2016 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 Pfam PF00512 His Kinase A (phospho-acceptor) domain 309 373 1.9E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 SUPERFAMILY SSF47384 291 373 9.42E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 SMART SM00388 308 373 2.5E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 531 8.9E-20 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 Pfam PF00672 HAMP domain 236 304 4.6E-14 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 Gene3D G3DSA:1.10.287.130 298 359 2.9E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 PANTHER PTHR24423:SF564 249 534 2.0E-68 T 13-09-2016 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 PANTHER PTHR24423 249 534 2.0E-68 T 13-09-2016 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 SUPERFAMILY SSF158472 256 305 3.14E-8 T 13-09-2016 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 5.6E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 5.6E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 485 5.6E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 5.6E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 SUPERFAMILY SSF55874 362 531 1.83E-38 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 SMART SM00387 422 533 5.0E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 Gene3D G3DSA:3.30.565.10 360 534 4.3E-39 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 PANTHER PTHR24423:SF564 14 32 2.0E-68 T 13-09-2016 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 PANTHER PTHR24423 118 196 2.0E-68 T 13-09-2016 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 PANTHER PTHR24423 14 32 2.0E-68 T 13-09-2016 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 SMART SM00304 255 307 2.8E-12 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS05830 c48703213b99c3dced62ba72fa4c182c 536 PANTHER PTHR24423:SF564 118 196 2.0E-68 T 13-09-2016 PMA3_RS04560 eb9e3a9e3dd283f6c476092b61ec571c 345 Gene3D G3DSA:3.40.50.300 4 234 2.2E-76 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04560 eb9e3a9e3dd283f6c476092b61ec571c 345 Pfam PF00005 ABC transporter 21 162 3.1E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS04560 eb9e3a9e3dd283f6c476092b61ec571c 345 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS04560 eb9e3a9e3dd283f6c476092b61ec571c 345 SUPERFAMILY SSF50331 249 337 9.64E-8 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS04560 eb9e3a9e3dd283f6c476092b61ec571c 345 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 35 335 2.8E-109 T 13-09-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PMA3_RS04560 eb9e3a9e3dd283f6c476092b61ec571c 345 SUPERFAMILY SSF52540 5 243 1.77E-85 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04560 eb9e3a9e3dd283f6c476092b61ec571c 345 Pfam PF08402 TOBE domain 257 337 4.7E-14 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS04560 eb9e3a9e3dd283f6c476092b61ec571c 345 PANTHER PTHR24220 6 248 9.8E-139 T 13-09-2016 PMA3_RS04560 eb9e3a9e3dd283f6c476092b61ec571c 345 PANTHER PTHR24220:SF150 6 248 9.8E-139 T 13-09-2016 PMA3_RS04560 eb9e3a9e3dd283f6c476092b61ec571c 345 SMART SM00382 29 212 1.8E-18 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 PANTHER PTHR32089 285 638 2.1E-135 T 13-09-2016 PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 Pfam PF16591 Helical bimodular sensor domain 37 285 2.6E-74 T 13-09-2016 IPR032255 Helical bimodular sensor domain PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 SMART SM01358 37 287 4.1E-57 T 13-09-2016 IPR032255 Helical bimodular sensor domain PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 PANTHER PTHR32089:SF64 285 638 2.1E-135 T 13-09-2016 PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 437 636 1.3E-52 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 1.4E-5 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 1.4E-5 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 SUPERFAMILY SSF58104 329 638 1.31E-79 T 13-09-2016 PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 SMART SM00304 309 361 7.1E-12 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 SMART SM00304 368 414 6.7 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 Pfam PF00672 HAMP domain 290 358 9.9E-17 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 SMART SM00283 376 637 8.7E-87 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS01345 bf2631dcd89fbbdd450a63304d43edaf 638 Gene3D G3DSA:1.10.287.950 391 608 5.4E-60 T 13-09-2016 PMA3_RS14300 2179a64dc6214ffb8179245e2347e0cc 708 Pfam PF00593 TonB dependent receptor 473 707 2.5E-33 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS14300 2179a64dc6214ffb8179245e2347e0cc 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 167 2.4E-19 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS14300 2179a64dc6214ffb8179245e2347e0cc 708 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 706 1.1E-107 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS14300 2179a64dc6214ffb8179245e2347e0cc 708 Gene3D G3DSA:2.40.170.20 186 707 1.1E-157 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS14300 2179a64dc6214ffb8179245e2347e0cc 708 Gene3D G3DSA:2.170.130.10 48 174 2.7E-36 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS14300 2179a64dc6214ffb8179245e2347e0cc 708 PANTHER PTHR32552:SF29 60 708 2.1E-190 T 13-09-2016 PMA3_RS14300 2179a64dc6214ffb8179245e2347e0cc 708 PANTHER PTHR32552:SF29 15 37 2.1E-190 T 13-09-2016 PMA3_RS14300 2179a64dc6214ffb8179245e2347e0cc 708 PANTHER PTHR32552 60 708 2.1E-190 T 13-09-2016 PMA3_RS14300 2179a64dc6214ffb8179245e2347e0cc 708 PANTHER PTHR32552 15 37 2.1E-190 T 13-09-2016 PMA3_RS14300 2179a64dc6214ffb8179245e2347e0cc 708 SUPERFAMILY SSF56935 58 707 4.33E-139 T 13-09-2016 PMA3_RS07100 a3aa5e31ba643a5263b09bc1786a3dca 296 Pfam PF05673 Protein of unknown function (DUF815) 34 288 7.8E-102 T 13-09-2016 IPR008533 Domain of unknown function DUF815 PMA3_RS07100 a3aa5e31ba643a5263b09bc1786a3dca 296 PANTHER PTHR13779 4 189 9.1E-91 T 13-09-2016 PMA3_RS07100 a3aa5e31ba643a5263b09bc1786a3dca 296 PANTHER PTHR13779 216 288 9.1E-91 T 13-09-2016 PMA3_RS07100 a3aa5e31ba643a5263b09bc1786a3dca 296 Gene3D G3DSA:3.40.50.300 60 190 7.2E-15 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07100 a3aa5e31ba643a5263b09bc1786a3dca 296 PANTHER PTHR13779:SF28 4 189 9.1E-91 T 13-09-2016 PMA3_RS07100 a3aa5e31ba643a5263b09bc1786a3dca 296 PANTHER PTHR13779:SF28 216 288 9.1E-91 T 13-09-2016 PMA3_RS07100 a3aa5e31ba643a5263b09bc1786a3dca 296 SMART SM00382 85 221 0.007 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS07100 a3aa5e31ba643a5263b09bc1786a3dca 296 SUPERFAMILY SSF52540 56 190 4.88E-24 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 Gene3D G3DSA:3.40.50.720 5 241 1.2E-74 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 4.4E-117 T 13-09-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 8.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 8.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 8.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 8.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PANTHER PTHR24322 153 184 5.7E-45 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PANTHER PTHR24322 7 137 5.7E-45 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 5.3E-6 T 13-09-2016 PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 241 1.4E-54 T 13-09-2016 PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.5E-6 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.5E-6 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.5E-6 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS01595 68cc608fdbcc83eb65b5144946f9619e 242 SUPERFAMILY SSF51735 5 241 6.02E-73 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08485 b7bd7f2388ce86f7f641bd39d275bbe9 231 PANTHER PTHR21485 3 216 1.1E-46 T 13-09-2016 PMA3_RS08485 b7bd7f2388ce86f7f641bd39d275bbe9 231 SUPERFAMILY SSF53448 3 227 1.13E-66 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS08485 b7bd7f2388ce86f7f641bd39d275bbe9 231 Gene3D G3DSA:3.90.550.10 3 226 1.7E-83 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS08485 b7bd7f2388ce86f7f641bd39d275bbe9 231 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 224 9.8E-109 T 13-09-2016 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 PMA3_RS08485 b7bd7f2388ce86f7f641bd39d275bbe9 231 Pfam PF02348 Cytidylyltransferase 4 178 2.0E-35 T 13-09-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PMA3_RS14690 6ded20c78649e7932cba0bfbe31b156f 291 PANTHER PTHR30537:SF5 1 287 2.2E-90 T 13-09-2016 PMA3_RS14690 6ded20c78649e7932cba0bfbe31b156f 291 SUPERFAMILY SSF46785 2 110 6.95E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14690 6ded20c78649e7932cba0bfbe31b156f 291 Gene3D G3DSA:3.40.190.10 91 175 1.7E-21 T 13-09-2016 PMA3_RS14690 6ded20c78649e7932cba0bfbe31b156f 291 SUPERFAMILY SSF53850 90 290 1.49E-36 T 13-09-2016 PMA3_RS14690 6ded20c78649e7932cba0bfbe31b156f 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.7E-21 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14690 6ded20c78649e7932cba0bfbe31b156f 291 Pfam PF03466 LysR substrate binding domain 87 289 1.2E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS14690 6ded20c78649e7932cba0bfbe31b156f 291 PANTHER PTHR30537 1 287 2.2E-90 T 13-09-2016 PMA3_RS14690 6ded20c78649e7932cba0bfbe31b156f 291 Gene3D G3DSA:1.10.10.10 1 84 1.1E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14690 6ded20c78649e7932cba0bfbe31b156f 291 Gene3D G3DSA:3.40.190.10 176 250 2.9E-16 T 13-09-2016 PMA3_RS17370 6ab9b0d3aedb25e946c6f3d7596f1af9 246 SMART SM00862 159 235 6.0E-19 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS17370 6ab9b0d3aedb25e946c6f3d7596f1af9 246 PANTHER PTHR26402 5 236 1.2E-96 T 13-09-2016 PMA3_RS17370 6ab9b0d3aedb25e946c6f3d7596f1af9 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 235 1.6E-19 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS17370 6ab9b0d3aedb25e946c6f3d7596f1af9 246 Pfam PF00072 Response regulator receiver domain 7 118 4.0E-30 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS17370 6ab9b0d3aedb25e946c6f3d7596f1af9 246 SUPERFAMILY SSF46894 137 237 5.1E-23 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS17370 6ab9b0d3aedb25e946c6f3d7596f1af9 246 PANTHER PTHR26402:SF528 5 236 1.2E-96 T 13-09-2016 PMA3_RS17370 6ab9b0d3aedb25e946c6f3d7596f1af9 246 SUPERFAMILY SSF52172 6 134 8.4E-41 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS17370 6ab9b0d3aedb25e946c6f3d7596f1af9 246 Gene3D G3DSA:3.40.50.2300 6 128 1.1E-40 T 13-09-2016 PMA3_RS17370 6ab9b0d3aedb25e946c6f3d7596f1af9 246 Gene3D G3DSA:1.10.10.10 136 236 3.0E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17370 6ab9b0d3aedb25e946c6f3d7596f1af9 246 SMART SM00448 5 117 1.8E-40 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 SMART SM00895 100 229 9.5E-21 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 PANTHER PTHR11751:SF277 94 116 7.0E-38 T 13-09-2016 PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 Pfam PF07729 FCD domain 100 228 4.1E-23 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 SUPERFAMILY SSF48008 97 236 2.35E-24 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 PANTHER PTHR11751 14 78 7.0E-38 T 13-09-2016 PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 1.9E-16 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 Gene3D G3DSA:1.20.120.530 95 237 2.8E-29 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 Gene3D G3DSA:1.10.10.10 9 78 9.8E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 SMART SM00345 16 75 2.0E-16 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 PANTHER PTHR11751:SF277 14 78 7.0E-38 T 13-09-2016 PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.8E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.8E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 SUPERFAMILY SSF46785 8 79 2.36E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16650 378ba94db7991e0cbe7b67223242910f 255 PANTHER PTHR11751 94 116 7.0E-38 T 13-09-2016 PMA3_RS17145 fe4a7b224e54f67c8d65a7ea0f6bd14f 283 Gene3D G3DSA:3.40.190.10 51 128 3.8E-6 T 13-09-2016 PMA3_RS17145 fe4a7b224e54f67c8d65a7ea0f6bd14f 283 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 26 283 3.5E-113 T 13-09-2016 IPR030836 Putative selenate ABC transporter periplasmic binding protein PMA3_RS17145 fe4a7b224e54f67c8d65a7ea0f6bd14f 283 PANTHER PTHR30024:SF17 1 238 4.5E-56 T 13-09-2016 PMA3_RS17145 fe4a7b224e54f67c8d65a7ea0f6bd14f 283 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 269 1.5E-68 T 13-09-2016 PMA3_RS17145 fe4a7b224e54f67c8d65a7ea0f6bd14f 283 SMART SM00062 26 255 0.0024 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS17145 fe4a7b224e54f67c8d65a7ea0f6bd14f 283 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 20 242 5.1E-73 T 13-09-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 PMA3_RS17145 fe4a7b224e54f67c8d65a7ea0f6bd14f 283 Gene3D G3DSA:3.40.190.10 129 229 3.0E-13 T 13-09-2016 PMA3_RS17145 fe4a7b224e54f67c8d65a7ea0f6bd14f 283 SUPERFAMILY SSF53850 31 231 1.7E-38 T 13-09-2016 PMA3_RS17145 fe4a7b224e54f67c8d65a7ea0f6bd14f 283 PANTHER PTHR30024 1 238 4.5E-56 T 13-09-2016 PMA3_RS14675 b99f7ebbf39a059e162218cb83354f4f 468 Gene3D G3DSA:3.90.1300.10 7 455 3.6E-121 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS14675 b99f7ebbf39a059e162218cb83354f4f 468 PANTHER PTHR11895 6 463 4.2E-126 T 13-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS14675 b99f7ebbf39a059e162218cb83354f4f 468 Pfam PF01425 Amidase 25 444 1.3E-99 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS14675 b99f7ebbf39a059e162218cb83354f4f 468 SUPERFAMILY SSF75304 3 454 3.27E-128 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS20305 b5f390ce9a2a7dd9997fe132f41a31b9 104 PANTHER PTHR10245 5 101 1.3E-14 T 13-09-2016 PMA3_RS20305 b5f390ce9a2a7dd9997fe132f41a31b9 104 Pfam PF01381 Helix-turn-helix 10 61 8.8E-14 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS20305 b5f390ce9a2a7dd9997fe132f41a31b9 104 Gene3D G3DSA:1.10.260.40 5 73 2.1E-19 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS20305 b5f390ce9a2a7dd9997fe132f41a31b9 104 SMART SM00530 9 64 1.7E-13 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS20305 b5f390ce9a2a7dd9997fe132f41a31b9 104 SUPERFAMILY SSF47413 3 72 3.22E-18 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS10705 93566b0e1c9d8280df45a6fe7f0ba012 135 PANTHER PTHR24423:SF458 15 131 2.4E-16 T 13-09-2016 PMA3_RS10705 93566b0e1c9d8280df45a6fe7f0ba012 135 PANTHER PTHR24423 15 131 2.4E-16 T 13-09-2016 PMA3_RS10705 93566b0e1c9d8280df45a6fe7f0ba012 135 SMART SM00448 14 125 2.0E-12 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS10705 93566b0e1c9d8280df45a6fe7f0ba012 135 Pfam PF00072 Response regulator receiver domain 16 124 1.1E-14 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS10705 93566b0e1c9d8280df45a6fe7f0ba012 135 Gene3D G3DSA:3.40.50.2300 15 133 1.2E-24 T 13-09-2016 PMA3_RS10705 93566b0e1c9d8280df45a6fe7f0ba012 135 SUPERFAMILY SSF52172 16 131 1.15E-21 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS17125 3d0116add394320a5f422a4bdd1bd194 143 Gene3D G3DSA:3.10.450.50 26 142 3.2E-34 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS17125 3d0116add394320a5f422a4bdd1bd194 143 Pfam PF14534 Domain of unknown function (DUF4440) 31 134 5.9E-17 T 13-09-2016 IPR027843 Domain of unknown function DUF4440 PMA3_RS17125 3d0116add394320a5f422a4bdd1bd194 143 SUPERFAMILY SSF54427 26 140 9.76E-24 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS07620 63e9d9aa31968ed8aed5ee86a7212a6d 201 SUPERFAMILY SSF52266 23 200 2.14E-49 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS07620 63e9d9aa31968ed8aed5ee86a7212a6d 201 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 27 183 3.9E-26 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS07620 63e9d9aa31968ed8aed5ee86a7212a6d 201 PANTHER PTHR30383 23 198 6.3E-44 T 13-09-2016 PMA3_RS07620 63e9d9aa31968ed8aed5ee86a7212a6d 201 Gene3D G3DSA:3.40.50.1110 23 200 1.6E-53 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS11470 d5e9034acc237fad2f9e4299957ca815 760 Pfam PF04984 Phage tail sheath protein 7 128 9.4E-19 T 13-09-2016 IPR007067 Tail sheath protein PMA3_RS11470 d5e9034acc237fad2f9e4299957ca815 760 Pfam PF04984 Phage tail sheath protein 445 752 6.0E-36 T 13-09-2016 IPR007067 Tail sheath protein PMA3_RS11470 d5e9034acc237fad2f9e4299957ca815 760 PANTHER PTHR35861:SF1 477 758 2.9E-108 T 13-09-2016 PMA3_RS11470 d5e9034acc237fad2f9e4299957ca815 760 PANTHER PTHR35861 477 758 2.9E-108 T 13-09-2016 PMA3_RS05605 5a9f54a27981fad73e3e0b45123bda37 232 SUPERFAMILY SSF161098 13 215 2.75E-38 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS05605 5a9f54a27981fad73e3e0b45123bda37 232 PANTHER PTHR30450:SF4 1 232 1.4E-152 T 13-09-2016 PMA3_RS05605 5a9f54a27981fad73e3e0b45123bda37 232 Gene3D G3DSA:1.10.3720.10 13 223 1.4E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS05605 5a9f54a27981fad73e3e0b45123bda37 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 222 4.1E-16 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS05605 5a9f54a27981fad73e3e0b45123bda37 232 PANTHER PTHR30450 1 232 1.4E-152 T 13-09-2016 PMA3_RS05605 5a9f54a27981fad73e3e0b45123bda37 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 117 6.0E-21 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 PANTHER PTHR10283:SF21 1 427 1.5E-145 T 13-09-2016 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 Pfam PF02040 Arsenical pump membrane protein 4 423 5.5E-148 T 13-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 2.3E-205 T 13-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 6.8E-110 T 13-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 6.8E-110 T 13-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 6.8E-110 T 13-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 6.8E-110 T 13-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 6.8E-110 T 13-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 6.8E-110 T 13-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 6.8E-110 T 13-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 6.8E-110 T 13-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PMA3_RS15340 6a8ff5dfa568c582dbe330fd68e04c28 427 PANTHER PTHR10283 1 427 1.5E-145 T 13-09-2016 PMA3_RS10515 9553b0baa4e745fa79eadcaac8c101d5 263 PANTHER PTHR24220:SF309 14 257 7.0E-80 T 13-09-2016 PMA3_RS10515 9553b0baa4e745fa79eadcaac8c101d5 263 SUPERFAMILY SSF52540 5 236 6.21E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10515 9553b0baa4e745fa79eadcaac8c101d5 263 Pfam PF00005 ABC transporter 28 177 2.4E-35 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS10515 9553b0baa4e745fa79eadcaac8c101d5 263 SMART SM00382 37 229 1.6E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS10515 9553b0baa4e745fa79eadcaac8c101d5 263 PANTHER PTHR24220 14 257 7.0E-80 T 13-09-2016 PMA3_RS10515 9553b0baa4e745fa79eadcaac8c101d5 263 Gene3D G3DSA:3.40.50.300 10 243 4.2E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11475 67c34e24d76ee726a136c34551fb98cd 174 Pfam PF06841 T4-like virus tail tube protein gp19 15 157 7.2E-45 T 13-09-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 PMA3_RS11475 67c34e24d76ee726a136c34551fb98cd 174 PANTHER PTHR38009 6 160 5.1E-42 T 13-09-2016 PMA3_RS11475 67c34e24d76ee726a136c34551fb98cd 174 PANTHER PTHR38009:SF1 6 160 5.1E-42 T 13-09-2016 PMA3_RS11475 67c34e24d76ee726a136c34551fb98cd 174 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 12 158 6.4E-45 T 13-09-2016 IPR011747 Conserved hypothetical protein CHP02241 PMA3_RS00960 768de7a57197468050fe29eca152ecc7 107 SUPERFAMILY SSF47413 20 90 6.68E-16 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS00960 768de7a57197468050fe29eca152ecc7 107 Gene3D G3DSA:1.10.260.40 19 81 8.6E-21 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS00960 768de7a57197468050fe29eca152ecc7 107 Pfam PF13744 Helix-turn-helix domain 16 84 8.4E-17 T 13-09-2016 PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 PANTHER PTHR24422:SF9 5 275 5.6E-116 T 13-09-2016 PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 SMART SM00138 5 272 1.5E-93 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 SUPERFAMILY SSF53335 73 266 3.66E-44 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 7 58 1.3E-12 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 Gene3D G3DSA:3.40.50.150 72 270 9.7E-61 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 SUPERFAMILY SSF47757 5 72 5.23E-16 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 2.3E-41 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 PRINTS PR00996 Glutamate methyltransferase family signature 105 125 2.3E-41 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 2.3E-41 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 2.3E-41 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 2.3E-41 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 2.3E-41 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 269 1.5E-64 T 13-09-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 PANTHER PTHR24422 5 275 5.6E-116 T 13-09-2016 PMA3_RS05795 74d9320541cfadec2e6175e878514b83 275 Gene3D G3DSA:1.10.155.10 7 71 6.7E-14 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS26735 2cc3b5fbb08d03d41971442e2ed1cef5 248 Pfam PF00717 Peptidase S24-like 152 214 3.2E-7 T 13-09-2016 IPR019759 Peptidase S24/S26A/S26B PMA3_RS26735 2cc3b5fbb08d03d41971442e2ed1cef5 248 PANTHER PTHR40661 14 242 4.4E-23 T 13-09-2016 PMA3_RS26735 2cc3b5fbb08d03d41971442e2ed1cef5 248 Gene3D G3DSA:1.10.260.40 1 67 9.2E-4 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS26735 2cc3b5fbb08d03d41971442e2ed1cef5 248 Gene3D G3DSA:2.10.109.10 104 234 4.6E-13 T 13-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PMA3_RS26735 2cc3b5fbb08d03d41971442e2ed1cef5 248 SUPERFAMILY SSF51306 130 235 6.98E-17 T 13-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PMA3_RS04100 b28dc666c6f4668683a45de402fa0ab0 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 122 4.0E-56 T 13-09-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PMA3_RS04100 b28dc666c6f4668683a45de402fa0ab0 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 54.097 T 13-09-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PMA3_RS04100 b28dc666c6f4668683a45de402fa0ab0 151 Pfam PF02381 MraZ protein, putative antitoxin-like 2 75 3.2E-16 T 13-09-2016 IPR020603 MraZ domain PMA3_RS04100 b28dc666c6f4668683a45de402fa0ab0 151 Pfam PF02381 MraZ protein, putative antitoxin-like 78 132 3.0E-14 T 13-09-2016 IPR020603 MraZ domain PMA3_RS04100 b28dc666c6f4668683a45de402fa0ab0 151 SUPERFAMILY SSF89447 2 137 3.45E-43 T 13-09-2016 PMA3_RS04100 b28dc666c6f4668683a45de402fa0ab0 151 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 148 1.3E-44 T 13-09-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PMA3_RS04100 b28dc666c6f4668683a45de402fa0ab0 151 PANTHER PTHR34701 2 151 4.2E-58 T 13-09-2016 PMA3_RS28435 bc1f006ed2e328c9ba6101bf18d14334 190 PANTHER PTHR30327 6 190 5.3E-59 T 13-09-2016 PMA3_RS28435 bc1f006ed2e328c9ba6101bf18d14334 190 Gene3D G3DSA:3.30.70.1300 47 133 1.8E-24 T 13-09-2016 PMA3_RS28435 bc1f006ed2e328c9ba6101bf18d14334 190 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 7 190 35.714 T 13-09-2016 IPR003774 Protein of unknown function UPF0301 PMA3_RS28435 bc1f006ed2e328c9ba6101bf18d14334 190 PANTHER PTHR30327:SF1 6 190 5.3E-59 T 13-09-2016 PMA3_RS28435 bc1f006ed2e328c9ba6101bf18d14334 190 SUPERFAMILY SSF143456 8 190 3.53E-61 T 13-09-2016 PMA3_RS28435 bc1f006ed2e328c9ba6101bf18d14334 190 Gene3D G3DSA:3.40.1740.10 134 180 1.3E-30 T 13-09-2016 PMA3_RS28435 bc1f006ed2e328c9ba6101bf18d14334 190 Gene3D G3DSA:3.40.1740.10 5 46 1.3E-30 T 13-09-2016 PMA3_RS28435 bc1f006ed2e328c9ba6101bf18d14334 190 Pfam PF02622 Uncharacterized ACR, COG1678 18 177 3.3E-44 T 13-09-2016 IPR003774 Protein of unknown function UPF0301 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 SMART SM00422 1 70 1.1E-30 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 Pfam PF13411 MerR HTH family regulatory protein 1 67 8.0E-20 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.6E-7 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.6E-7 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.6E-7 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 PANTHER PTHR30204 1 112 1.5E-48 T 13-09-2016 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 Gene3D G3DSA:1.10.1660.10 1 55 9.6E-27 T 13-09-2016 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 PANTHER PTHR30204:SF18 1 112 1.5E-48 T 13-09-2016 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 Gene3D G3DSA:1.10.1660.10 56 128 7.0E-26 T 13-09-2016 PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 SUPERFAMILY SSF46955 1 124 1.25E-34 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS28735 dcc9b481bff15abfb25f3054de17d4a6 149 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 4.9E-62 T 13-09-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 PMA3_RS02825 7695773ac1bf9750e05bc9be7744a6e1 351 SUPERFAMILY SSF53850 31 348 6.42E-60 T 13-09-2016 PMA3_RS02825 7695773ac1bf9750e05bc9be7744a6e1 351 PANTHER PTHR30222 15 351 3.6E-141 T 13-09-2016 PMA3_RS02825 7695773ac1bf9750e05bc9be7744a6e1 351 Pfam PF13416 Bacterial extracellular solute-binding protein 50 314 1.8E-38 T 13-09-2016 PMA3_RS02825 7695773ac1bf9750e05bc9be7744a6e1 351 Gene3D G3DSA:3.40.190.10 133 291 6.1E-33 T 13-09-2016 PMA3_RS02825 7695773ac1bf9750e05bc9be7744a6e1 351 PANTHER PTHR30222:SF2 15 351 3.6E-141 T 13-09-2016 PMA3_RS21175 f43843196bdb736db4cfe028cf6b527f 216 Pfam PF00551 Formyl transferase 7 185 4.2E-62 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS21175 f43843196bdb736db4cfe028cf6b527f 216 PANTHER PTHR10520 7 197 1.6E-101 T 13-09-2016 PMA3_RS21175 f43843196bdb736db4cfe028cf6b527f 216 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 7 193 8.9E-76 T 13-09-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 PMA3_RS21175 f43843196bdb736db4cfe028cf6b527f 216 SUPERFAMILY SSF53328 7 209 5.76E-66 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS21175 f43843196bdb736db4cfe028cf6b527f 216 Gene3D G3DSA:3.40.50.170 6 198 3.5E-72 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS21175 f43843196bdb736db4cfe028cf6b527f 216 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 191 31.938 T 13-09-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 PMA3_RS21175 f43843196bdb736db4cfe028cf6b527f 216 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 137 160 - T 13-09-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 SUPERFAMILY SSF52540 13 238 2.27E-36 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 PANTHER PTHR22942:SF38 13 309 2.0E-58 T 13-09-2016 PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 Pfam PF06745 KaiC 255 473 2.6E-31 T 13-09-2016 IPR014774 KaiC-like domain PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 Pfam PF06745 KaiC 13 239 1.3E-40 T 13-09-2016 IPR014774 KaiC-like domain PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 SUPERFAMILY SSF52540 253 485 1.28E-40 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 PRINTS PR01874 DNA repair protein radA signature 263 291 1.7E-5 T 13-09-2016 PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 PRINTS PR01874 DNA repair protein radA signature 404 432 1.7E-5 T 13-09-2016 PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 Gene3D G3DSA:3.40.50.300 245 487 6.0E-74 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 Gene3D G3DSA:3.40.50.300 8 244 3.8E-72 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 PANTHER PTHR22942 13 309 2.0E-58 T 13-09-2016 PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 PIRSF PIRSF039117 2 495 1.2E-145 T 13-09-2016 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 SMART SM00382 271 435 0.47 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS13445 87361b307e1c86340aaeda3ccbea56d0 500 SMART SM00382 29 216 9.5E-5 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS05395 9dc070cf032e01473ff55df54ba81c58 259 PANTHER PTHR13707:SF35 1 236 1.2E-111 T 13-09-2016 PMA3_RS05395 9dc070cf032e01473ff55df54ba81c58 259 Gene3D G3DSA:3.40.810.20 2 243 2.4E-91 T 13-09-2016 PMA3_RS05395 9dc070cf032e01473ff55df54ba81c58 259 SUPERFAMILY SSF100950 1 244 4.49E-72 T 13-09-2016 PMA3_RS05395 9dc070cf032e01473ff55df54ba81c58 259 Pfam PF01144 Coenzyme A transferase 7 215 1.2E-47 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS05395 9dc070cf032e01473ff55df54ba81c58 259 SMART SM00882 7 216 5.2E-40 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS05395 9dc070cf032e01473ff55df54ba81c58 259 PANTHER PTHR13707 1 236 1.2E-111 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS19945 c54726c51c0a86a28605bcf8afe885b9 715 Gene3D G3DSA:1.10.287.950 467 684 1.1E-55 T 13-09-2016 PMA3_RS19945 c54726c51c0a86a28605bcf8afe885b9 715 SMART SM00304 384 438 2.1E-8 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS19945 c54726c51c0a86a28605bcf8afe885b9 715 Pfam PF00672 HAMP domain 366 434 2.2E-14 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS19945 c54726c51c0a86a28605bcf8afe885b9 715 SMART SM00283 453 714 3.0E-79 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS19945 c54726c51c0a86a28605bcf8afe885b9 715 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 525 713 1.1E-47 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS19945 c54726c51c0a86a28605bcf8afe885b9 715 Gene3D G3DSA:3.30.450.20 206 350 2.3E-6 T 13-09-2016 PMA3_RS19945 c54726c51c0a86a28605bcf8afe885b9 715 PANTHER PTHR32089:SF34 24 715 1.6E-256 T 13-09-2016 PMA3_RS19945 c54726c51c0a86a28605bcf8afe885b9 715 PANTHER PTHR32089 24 715 1.6E-256 T 13-09-2016 PMA3_RS19945 c54726c51c0a86a28605bcf8afe885b9 715 SUPERFAMILY SSF58104 406 715 2.62E-79 T 13-09-2016 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 SUPERFAMILY SSF46767 272 353 2.35E-31 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 323 329 - T 13-09-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 SUPERFAMILY SSF46689 104 136 4.48E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 Gene3D G3DSA:1.10.10.10 272 353 1.2E-33 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 SUPERFAMILY SSF53155 193 271 4.9E-20 T 13-09-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 274 353 1.0E-32 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 Pfam PF12833 Helix-turn-helix domain 109 186 3.1E-19 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 PANTHER PTHR10815:SF9 161 353 2.2E-116 T 13-09-2016 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 SUPERFAMILY SSF57884 10 95 1.03E-29 T 13-09-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 Gene3D G3DSA:3.40.10.10 10 92 7.3E-32 T 13-09-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 PIRSF PIRSF000409 1 354 6.0E-140 T 13-09-2016 IPR016221 Bifunctional regulatory protein Ada PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 Gene3D G3DSA:1.10.10.60 93 140 3.8E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 Gene3D G3DSA:3.30.160.70 185 271 2.3E-33 T 13-09-2016 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 Pfam PF02805 Metal binding domain of Ada 15 75 6.8E-31 T 13-09-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 PANTHER PTHR10815 161 353 2.2E-116 T 13-09-2016 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 SMART SM00342 103 185 1.1E-16 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 273 352 2.7E-34 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS15985 e78fc73c40a09a4b200dcdc3b15a2b81 354 Gene3D G3DSA:1.10.10.60 141 184 8.6E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS03515 78e6b5fa2c2ac841601d7008ec09c05f 345 PANTHER PTHR30472 5 344 1.9E-142 T 13-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PMA3_RS03515 78e6b5fa2c2ac841601d7008ec09c05f 345 SUPERFAMILY SSF81345 5 342 8.37E-82 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS03515 78e6b5fa2c2ac841601d7008ec09c05f 345 PANTHER PTHR30472:SF3 5 344 1.9E-142 T 13-09-2016 PMA3_RS03515 78e6b5fa2c2ac841601d7008ec09c05f 345 Pfam PF01032 FecCD transport family 17 342 2.9E-90 T 13-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PMA3_RS03515 78e6b5fa2c2ac841601d7008ec09c05f 345 Gene3D G3DSA:1.10.3470.10 8 344 1.4E-106 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS29305 86becefccd0547e86a9fa0ddf280dde1 235 Gene3D G3DSA:3.40.50.1000 1 224 1.9E-42 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS29305 86becefccd0547e86a9fa0ddf280dde1 235 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 194 8.5E-15 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS29305 86becefccd0547e86a9fa0ddf280dde1 235 PANTHER PTHR12725:SF65 1 229 1.1E-61 T 13-09-2016 PMA3_RS29305 86becefccd0547e86a9fa0ddf280dde1 235 PANTHER PTHR12725 1 229 1.1E-61 T 13-09-2016 PMA3_RS29305 86becefccd0547e86a9fa0ddf280dde1 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 199 3.1E-11 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS29305 86becefccd0547e86a9fa0ddf280dde1 235 SUPERFAMILY SSF56784 3 228 8.7E-48 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS29305 86becefccd0547e86a9fa0ddf280dde1 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 2.7E-24 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 PANTHER PTHR18934 3 455 1.6E-146 T 13-09-2016 PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 PANTHER PTHR18934 725 734 1.6E-146 T 13-09-2016 PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 Gene3D G3DSA:3.40.50.300 203 353 1.6E-18 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 Pfam PF00271 Helicase conserved C-terminal domain 208 333 6.8E-14 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 SUPERFAMILY SSF52540 16 345 5.21E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 Pfam PF00270 DEAD/DEAH box helicase 19 163 2.1E-6 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 Gene3D G3DSA:3.40.50.300 3 164 1.3E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 PIRSF PIRSF005496 1 840 0.0 T 13-09-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 SMART SM00490 234 334 4.9E-19 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 Pfam PF04408 Helicase associated domain (HA2) 394 471 2.0E-12 T 13-09-2016 IPR007502 Helicase-associated domain GO:0004386 PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 Pfam PF08482 ATP-dependent helicase C-terminal 695 826 4.3E-53 T 13-09-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 838 0.0 T 13-09-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 SMART SM00847 393 485 8.9E-15 T 13-09-2016 IPR007502 Helicase-associated domain GO:0004386 PMA3_RS02790 17321a4e0b19a134b55aa55c4b0e01ee 840 SMART SM00487 5 189 5.8E-15 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 PANTHER PTHR11751:SF333 126 149 4.8E-26 T 13-09-2016 PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 PANTHER PTHR11751:SF333 6 79 4.8E-26 T 13-09-2016 PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 PANTHER PTHR11751 6 79 4.8E-26 T 13-09-2016 PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 6.9E-18 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 SUPERFAMILY SSF46785 9 80 1.05E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 SMART SM00345 17 76 1.3E-16 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 PANTHER PTHR11751 126 149 4.8E-26 T 13-09-2016 PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.5E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.5E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 SMART SM00866 97 237 1.9E-36 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 Gene3D G3DSA:1.10.10.10 9 72 5.3E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 SUPERFAMILY SSF64288 64 244 1.11E-48 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 Gene3D G3DSA:3.40.1410.10 73 244 7.4E-52 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS12015 d782109fb52007a5cd7dbf0df9abc746 250 Pfam PF07702 UTRA domain 98 237 9.2E-38 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 Pfam PF07660 Secretin and TonB N terminus short domain 206 256 1.9E-7 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 PRINTS PR00811 Bacterial general secretion pathway protein D signature 330 340 2.3E-9 T 13-09-2016 IPR001775 GspD/PilQ family PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 PRINTS PR00811 Bacterial general secretion pathway protein D signature 521 539 2.3E-9 T 13-09-2016 IPR001775 GspD/PilQ family PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 PRINTS PR00811 Bacterial general secretion pathway protein D signature 544 558 2.3E-9 T 13-09-2016 IPR001775 GspD/PilQ family PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 PRINTS PR00811 Bacterial general secretion pathway protein D signature 421 431 2.3E-9 T 13-09-2016 IPR001775 GspD/PilQ family PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 PRINTS PR01032 Gene IV protein signature 484 512 2.6E-7 T 13-09-2016 PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 PRINTS PR01032 Gene IV protein signature 537 559 2.6E-7 T 13-09-2016 PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 PRINTS PR01032 Gene IV protein signature 411 434 2.6E-7 T 13-09-2016 PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 Pfam PF03958 Bacterial type II/III secretion system short domain 270 327 7.4E-7 T 13-09-2016 IPR005644 NolW-like PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 Gene3D G3DSA:1.25.40.10 26 163 3.5E-8 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 Pfam PF00263 Bacterial type II and III secretion system protein 392 557 4.0E-40 T 13-09-2016 IPR004846 Type II/III secretion system GO:0009306 PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 PANTHER PTHR30332 182 557 9.4E-73 T 13-09-2016 PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 SMART SM00965 206 257 1.3E-5 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 PANTHER PTHR30332:SF7 182 557 9.4E-73 T 13-09-2016 PMA3_RS17605 fcbbf2bc0e0a5ce985ea12d49d5b1d1d 610 SUPERFAMILY SSF48452 21 166 2.4E-7 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS29475 41acc9b8639c3ed9c32c3e1df76489cb 70 Pfam PF11720 Peptidase inhibitor I78 family 12 60 3.3E-5 T 13-09-2016 IPR021719 Proteinase inhibitor I78 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 SUPERFAMILY SSF51905 161 467 3.37E-31 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 165 416 6.5E-16 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 Pfam PF01571 Aminomethyltransferase folate-binding domain 590 853 5.7E-75 T 13-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 Gene3D G3DSA:2.40.30.110 876 952 3.5E-12 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 Gene3D G3DSA:3.30.1360.120 733 830 7.6E-40 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 Gene3D G3DSA:3.30.1360.120 586 642 7.6E-40 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 PANTHER PTHR13847 113 213 4.9E-41 T 13-09-2016 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 PANTHER PTHR13847 586 877 4.9E-41 T 13-09-2016 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 Gene3D G3DSA:3.50.50.60 272 419 6.6E-12 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 16 96 2.5E-21 T 13-09-2016 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 Gene3D G3DSA:3.50.50.60 164 271 8.8E-17 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 PANTHER PTHR13847:SF189 113 213 4.9E-41 T 13-09-2016 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 PANTHER PTHR13847:SF189 586 877 4.9E-41 T 13-09-2016 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 SUPERFAMILY SSF103025 584 867 5.02E-87 T 13-09-2016 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 861 953 2.3E-10 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 Gene3D G3DSA:3.30.70.1400 643 726 4.3E-20 T 13-09-2016 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 165 187 3.3E-9 T 13-09-2016 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 642 657 3.3E-9 T 13-09-2016 PMA3_RS11065 0e32b7334d106b9d3f6df661ff2fd482 965 SUPERFAMILY SSF101790 877 963 1.54E-15 T 13-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PMA3_RS27770 e6e81f150885829db6d9b72d45a5d075 226 PANTHER PTHR21343:SF13 1 223 1.9E-104 T 13-09-2016 PMA3_RS27770 e6e81f150885829db6d9b72d45a5d075 226 Gene3D G3DSA:3.40.50.300 4 221 4.8E-79 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27770 e6e81f150885829db6d9b72d45a5d075 226 PIRSF PIRSF006755 1 225 4.5E-72 T 13-09-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PMA3_RS27770 e6e81f150885829db6d9b72d45a5d075 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 177 3.1E-45 T 13-09-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PMA3_RS27770 e6e81f150885829db6d9b72d45a5d075 226 SUPERFAMILY SSF52540 1 219 8.21E-61 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27770 e6e81f150885829db6d9b72d45a5d075 226 PANTHER PTHR21343 1 223 1.9E-104 T 13-09-2016 PMA3_RS27770 e6e81f150885829db6d9b72d45a5d075 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 217 29.467 T 13-09-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PMA3_RS27770 e6e81f150885829db6d9b72d45a5d075 226 Pfam PF13500 AAA domain 4 214 4.4E-38 T 13-09-2016 PMA3_RS13110 236c9910276af691707a32e6c600c0ce 333 PANTHER PTHR30273 8 327 7.0E-72 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS13110 236c9910276af691707a32e6c600c0ce 333 Pfam PF04773 FecR protein 123 206 8.3E-20 T 13-09-2016 IPR006860 FecR protein PMA3_RS13110 236c9910276af691707a32e6c600c0ce 333 Pfam PF16220 Domain of unknown function (DUF4880) 16 55 3.2E-12 T 13-09-2016 IPR032623 FecR, N-terminal PMA3_RS13110 236c9910276af691707a32e6c600c0ce 333 PIRSF PIRSF018266 6 325 5.5E-74 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS13110 236c9910276af691707a32e6c600c0ce 333 PANTHER PTHR30273:SF2 8 327 7.0E-72 T 13-09-2016 PMA3_RS14800 c0db91f8f7da869b78e9bd597a8a48e2 254 PIRSF PIRSF039085 1 254 4.6E-118 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS14800 c0db91f8f7da869b78e9bd597a8a48e2 254 PANTHER PTHR24220:SF327 6 252 3.0E-134 T 13-09-2016 PMA3_RS14800 c0db91f8f7da869b78e9bd597a8a48e2 254 SUPERFAMILY SSF52540 5 248 9.78E-80 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14800 c0db91f8f7da869b78e9bd597a8a48e2 254 PANTHER PTHR24220 6 252 3.0E-134 T 13-09-2016 PMA3_RS14800 c0db91f8f7da869b78e9bd597a8a48e2 254 Gene3D G3DSA:3.40.50.300 4 250 2.4E-81 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14800 c0db91f8f7da869b78e9bd597a8a48e2 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS14800 c0db91f8f7da869b78e9bd597a8a48e2 254 SMART SM00382 29 226 1.5E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS14800 c0db91f8f7da869b78e9bd597a8a48e2 254 Pfam PF00005 ABC transporter 20 178 1.4E-33 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS20505 a008c5cd8dc1ed2078df13b1a53fdf8c 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 2.9E-16 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS20505 a008c5cd8dc1ed2078df13b1a53fdf8c 240 Pfam PF07729 FCD domain 90 216 9.0E-31 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS20505 a008c5cd8dc1ed2078df13b1a53fdf8c 240 Gene3D G3DSA:1.10.10.10 10 80 3.3E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20505 a008c5cd8dc1ed2078df13b1a53fdf8c 240 PANTHER PTHR11751:SF426 19 106 1.1E-58 T 13-09-2016 PMA3_RS20505 a008c5cd8dc1ed2078df13b1a53fdf8c 240 Gene3D G3DSA:1.20.120.530 84 228 8.3E-34 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS20505 a008c5cd8dc1ed2078df13b1a53fdf8c 240 PANTHER PTHR11751 19 106 1.1E-58 T 13-09-2016 PMA3_RS20505 a008c5cd8dc1ed2078df13b1a53fdf8c 240 SUPERFAMILY SSF48008 87 224 8.89E-28 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS20505 a008c5cd8dc1ed2078df13b1a53fdf8c 240 SMART SM00345 22 80 1.0E-13 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS20505 a008c5cd8dc1ed2078df13b1a53fdf8c 240 SUPERFAMILY SSF46785 14 109 1.16E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20505 a008c5cd8dc1ed2078df13b1a53fdf8c 240 SMART SM00895 90 217 1.4E-26 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 Gene3D G3DSA:3.30.460.10 37 188 7.2E-51 T 13-09-2016 PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 SUPERFAMILY SSF81301 28 185 1.08E-41 T 13-09-2016 PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 456 3.4E-189 T 13-09-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 Pfam PF01743 Poly A polymerase head domain 56 189 8.9E-40 T 13-09-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 PANTHER PTHR13734 5 279 8.4E-125 T 13-09-2016 PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 PANTHER PTHR13734:SF47 5 279 8.4E-125 T 13-09-2016 PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 9 459 37.409 T 13-09-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 Pfam PF12626 Polymerase A arginine-rich C-terminus 332 448 5.6E-44 T 13-09-2016 IPR025866 Polymerase A arginine-rich C-terminal domain PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 216 278 5.5E-20 T 13-09-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 SUPERFAMILY SSF81891 187 422 2.49E-50 T 13-09-2016 PMA3_RS03470 30a99736979d02d5e334d644ad9af234 466 Gene3D G3DSA:1.10.3090.10 189 423 6.1E-51 T 13-09-2016 PMA3_RS12220 8b721df50a89a170b91fe553b55324f6 164 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 161 8.8E-45 T 13-09-2016 IPR008318 Uncharacterised conserved protein UCP030820 PMA3_RS12220 8b721df50a89a170b91fe553b55324f6 164 PIRSF PIRSF030820 1 164 3.1E-64 T 13-09-2016 IPR008318 Uncharacterised conserved protein UCP030820 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 PANTHER PTHR11728 1 324 8.4E-124 T 13-09-2016 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 Gene3D G3DSA:1.10.1040.10 184 325 1.3E-50 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 SUPERFAMILY SSF48179 180 331 8.33E-50 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 322 35.593 T 13-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 SUPERFAMILY SSF51735 7 178 1.83E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 Gene3D G3DSA:3.40.50.720 2 183 3.3E-61 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 2.7E-39 T 13-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 2.7E-39 T 13-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 2.7E-39 T 13-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 2.7E-39 T 13-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 59 86 2.7E-39 T 13-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 2.7E-39 T 13-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 PIRSF PIRSF000114 1 332 9.2E-108 T 13-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 159 4.0E-50 T 13-09-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 320 3.1E-46 T 13-09-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS05995 2e6a656a297827ebfcfbfded6d455ca9 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 13-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PMA3_RS19715 adf906287632f85cf239758cf69628d1 102 PANTHER PTHR11434:SF4 5 102 2.7E-62 T 13-09-2016 PMA3_RS19715 adf906287632f85cf239758cf69628d1 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 96 1.4E-23 T 13-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PMA3_RS19715 adf906287632f85cf239758cf69628d1 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 19.205 T 13-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PMA3_RS19715 adf906287632f85cf239758cf69628d1 102 PANTHER PTHR11434 5 102 2.7E-62 T 13-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 SUPERFAMILY SSF52540 516 689 5.67E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 SUPERFAMILY SSF52540 210 286 5.67E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 SUPERFAMILY SSF52540 475 489 5.67E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 SUPERFAMILY SSF52540 57 105 5.67E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 PANTHER PTHR11472:SF32 1 712 1.2E-304 T 13-09-2016 PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 Pfam PF13307 Helicase C-terminal domain 553 708 8.2E-34 T 13-09-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 PANTHER PTHR11472 1 712 1.2E-304 T 13-09-2016 PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 Gene3D G3DSA:3.40.50.300 539 690 2.5E-7 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 Gene3D G3DSA:3.40.50.300 227 268 1.7E-13 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 Gene3D G3DSA:3.40.50.300 56 140 1.7E-13 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05240 ab70be4390b2e4975178e0d644ee963e 714 SMART SM00491 562 695 1.2E-30 T 13-09-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PMA3_RS23630 42de17d8e3815d63e4fdca0343f7de86 354 Pfam PF09375 Imelysin 37 332 8.4E-51 T 13-09-2016 PMA3_RS16465 578f654549fb2940e08d616f1e119fba 153 Pfam PF03061 Thioesterase superfamily 44 106 2.4E-4 T 13-09-2016 IPR006683 Thioesterase domain PMA3_RS16465 578f654549fb2940e08d616f1e119fba 153 PANTHER PTHR36934 2 136 3.0E-24 T 13-09-2016 PMA3_RS16465 578f654549fb2940e08d616f1e119fba 153 PIRSF PIRSF014972 3 136 1.4E-36 T 13-09-2016 IPR025540 Fluoroacetyl-CoA thioesterase PMA3_RS16465 578f654549fb2940e08d616f1e119fba 153 SUPERFAMILY SSF54637 14 130 8.34E-34 T 13-09-2016 IPR029069 HotDog domain PMA3_RS16465 578f654549fb2940e08d616f1e119fba 153 Gene3D G3DSA:3.10.129.10 12 131 7.8E-32 T 13-09-2016 IPR029069 HotDog domain PMA3_RS07515 bd4c5e3df5123cb12cb6acb31a2b9cbd 179 Pfam PF05751 FixH 12 155 7.4E-38 T 13-09-2016 IPR008620 Nitrogen fixation protein FixH PMA3_RS01745 91be532bec72709ef761dc156bff9be6 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 275 4.8E-97 T 13-09-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PMA3_RS01745 91be532bec72709ef761dc156bff9be6 279 PANTHER PTHR37426:SF1 1 278 1.5E-137 T 13-09-2016 PMA3_RS01745 91be532bec72709ef761dc156bff9be6 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 265 38.527 T 13-09-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PMA3_RS01745 91be532bec72709ef761dc156bff9be6 279 SUPERFAMILY SSF53335 8 275 3.21E-87 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS01745 91be532bec72709ef761dc156bff9be6 279 Gene3D G3DSA:3.40.50.150 1 278 3.6E-103 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS01745 91be532bec72709ef761dc156bff9be6 279 PANTHER PTHR37426 1 278 1.5E-137 T 13-09-2016 PMA3_RS09645 2d229e892d4a02c25cf6373d8bfa2049 472 PANTHER PTHR11699 11 467 9.3E-183 T 13-09-2016 PMA3_RS09645 2d229e892d4a02c25cf6373d8bfa2049 472 SUPERFAMILY SSF53720 11 467 9.42E-131 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS09645 2d229e892d4a02c25cf6373d8bfa2049 472 Gene3D G3DSA:3.40.605.10 12 256 3.0E-73 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS09645 2d229e892d4a02c25cf6373d8bfa2049 472 Gene3D G3DSA:3.40.309.10 257 439 5.0E-60 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS09645 2d229e892d4a02c25cf6373d8bfa2049 472 PANTHER PTHR11699:SF108 11 467 9.3E-183 T 13-09-2016 PMA3_RS09645 2d229e892d4a02c25cf6373d8bfa2049 472 Pfam PF00171 Aldehyde dehydrogenase family 13 464 1.0E-143 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS21995 e0d11fd65d650906ab88a6503c7b7274 131 PIRSF PIRSF016789 12 131 2.2E-39 T 13-09-2016 IPR007401 Protein of unknown function DUF454 PMA3_RS21995 e0d11fd65d650906ab88a6503c7b7274 131 Pfam PF04304 Protein of unknown function (DUF454) 13 127 1.3E-42 T 13-09-2016 IPR007401 Protein of unknown function DUF454 PMA3_RS21995 e0d11fd65d650906ab88a6503c7b7274 131 PANTHER PTHR35813 1 128 1.9E-47 T 13-09-2016 PMA3_RS21995 e0d11fd65d650906ab88a6503c7b7274 131 PANTHER PTHR35813:SF1 1 128 1.9E-47 T 13-09-2016 PMA3_RS11185 c63182d4aa606cba2402f7aad4e9e73f 225 Pfam PF00857 Isochorismatase family 6 168 1.5E-41 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS11185 c63182d4aa606cba2402f7aad4e9e73f 225 PANTHER PTHR11080 6 171 7.7E-44 T 13-09-2016 PMA3_RS11185 c63182d4aa606cba2402f7aad4e9e73f 225 Gene3D G3DSA:3.40.50.850 4 188 8.4E-54 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS11185 c63182d4aa606cba2402f7aad4e9e73f 225 SUPERFAMILY SSF52499 3 186 6.93E-53 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 SUPERFAMILY SSF47203 231 397 7.4E-22 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 PANTHER PTHR10909 367 398 9.1E-158 T 13-09-2016 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 SUPERFAMILY SSF56645 2 244 1.22E-77 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 Gene3D G3DSA:1.20.140.10 222 397 1.6E-28 T 13-09-2016 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 6.4E-20 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 PANTHER PTHR10909 1 348 9.1E-158 T 13-09-2016 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 Gene3D G3DSA:1.10.540.10 1 121 1.8E-27 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 PANTHER PTHR10909:SF229 367 398 9.1E-158 T 13-09-2016 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 PANTHER PTHR10909:SF229 1 348 9.1E-158 T 13-09-2016 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 Gene3D G3DSA:2.40.110.10 124 221 2.8E-37 T 13-09-2016 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 5.4E-21 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS18680 8e8db8a7742fe46943ac888b49129dc3 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 121 2.1E-23 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11440 a9154dab8b4db567a2126c91fe1f5234 685 PANTHER PTHR30252 5 685 0.0 T 13-09-2016 PMA3_RS11440 a9154dab8b4db567a2126c91fe1f5234 685 PANTHER PTHR30252:SF3 5 685 0.0 T 13-09-2016 PMA3_RS11440 a9154dab8b4db567a2126c91fe1f5234 685 Pfam PF02554 Carbon starvation protein CstA 32 408 4.7E-167 T 13-09-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 PMA3_RS11440 a9154dab8b4db567a2126c91fe1f5234 685 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 9.1E-36 T 13-09-2016 IPR025299 CstA, C-terminal domain PMA3_RS10615 4b32f596f6090e42514a81a5e46d78a4 148 SUPERFAMILY SSF160719 33 121 4.05E-18 T 13-09-2016 PMA3_RS10615 4b32f596f6090e42514a81a5e46d78a4 148 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 133 8.4E-23 T 13-09-2016 IPR017737 Type VI secretion system, lysozyme-related protein PMA3_RS10615 4b32f596f6090e42514a81a5e46d78a4 148 Gene3D G3DSA:3.10.450.40 34 120 6.4E-11 T 13-09-2016 PMA3_RS10615 4b32f596f6090e42514a81a5e46d78a4 148 Pfam PF04965 Gene 25-like lysozyme 34 115 4.0E-10 T 13-09-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD PMA3_RS23120 2e81989955ff376e4da5b943bc662744 608 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 601 0.0 T 13-09-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 PMA3_RS23120 2e81989955ff376e4da5b943bc662744 608 PANTHER PTHR21000 1 597 0.0 T 13-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS23120 2e81989955ff376e4da5b943bc662744 608 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 13-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS23120 2e81989955ff376e4da5b943bc662744 608 SUPERFAMILY SSF52016 419 600 8.63E-56 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS23120 2e81989955ff376e4da5b943bc662744 608 SUPERFAMILY SSF143975 1 418 8.24E-146 T 13-09-2016 PMA3_RS23120 2e81989955ff376e4da5b943bc662744 608 PANTHER PTHR21000:SF9 1 597 0.0 T 13-09-2016 PMA3_RS23120 2e81989955ff376e4da5b943bc662744 608 Pfam PF00920 Dehydratase family 67 597 3.5E-161 T 13-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS23120 2e81989955ff376e4da5b943bc662744 608 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 13-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS05475 9097636ec684d9b7f56da89ad99cefe9 114 Gene3D G3DSA:3.30.70.1060 1 112 7.9E-37 T 13-09-2016 PMA3_RS05475 9097636ec684d9b7f56da89ad99cefe9 114 PANTHER PTHR35174:SF3 2 114 5.2E-42 T 13-09-2016 PMA3_RS05475 9097636ec684d9b7f56da89ad99cefe9 114 PANTHER PTHR35174 2 114 5.2E-42 T 13-09-2016 PMA3_RS05475 9097636ec684d9b7f56da89ad99cefe9 114 Pfam PF03795 YCII-related domain 1 112 3.8E-25 T 13-09-2016 IPR005545 YCII-related PMA3_RS05475 9097636ec684d9b7f56da89ad99cefe9 114 SUPERFAMILY SSF54909 1 113 1.23E-31 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS01750 83491b72d78af77876447b0cc9f4ebfb 215 SUPERFAMILY SSF55068 9 214 1.96E-77 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS01750 83491b72d78af77876447b0cc9f4ebfb 215 Pfam PF01625 Peptide methionine sulfoxide reductase 52 204 1.1E-63 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS01750 83491b72d78af77876447b0cc9f4ebfb 215 Gene3D G3DSA:3.30.1060.10 12 204 1.1E-76 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS01750 83491b72d78af77876447b0cc9f4ebfb 215 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 52 204 6.8E-64 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS01750 83491b72d78af77876447b0cc9f4ebfb 215 PANTHER PTHR10173:SF36 1 208 1.3E-101 T 13-09-2016 PMA3_RS01750 83491b72d78af77876447b0cc9f4ebfb 215 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 49 210 37.292 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS01750 83491b72d78af77876447b0cc9f4ebfb 215 PANTHER PTHR10173 1 208 1.3E-101 T 13-09-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.8E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.8E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.8E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 Gene3D G3DSA:3.40.190.10 94 183 1.5E-20 T 13-09-2016 PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 Pfam PF03466 LysR substrate binding domain 94 293 8.3E-26 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 SUPERFAMILY SSF46785 3 85 5.45E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.0E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 SUPERFAMILY SSF53850 94 296 7.6E-27 T 13-09-2016 PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 Gene3D G3DSA:1.10.10.10 3 85 3.9E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 Gene3D G3DSA:3.40.190.10 184 260 2.7E-8 T 13-09-2016 PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 PANTHER PTHR30537:SF26 1 310 2.3E-73 T 13-09-2016 PMA3_RS14005 8b58051b9bde68991da6004e14779018 313 PANTHER PTHR30537 1 310 2.3E-73 T 13-09-2016 PMA3_RS28710 cd9231ac622f8d7a8b20754d6ec7ec2c 341 PANTHER PTHR30006:SF9 25 339 3.4E-129 T 13-09-2016 PMA3_RS28710 cd9231ac622f8d7a8b20754d6ec7ec2c 341 Gene3D G3DSA:3.40.190.10 126 263 1.1E-43 T 13-09-2016 PMA3_RS28710 cd9231ac622f8d7a8b20754d6ec7ec2c 341 Pfam PF13343 Bacterial extracellular solute-binding protein 75 309 2.9E-28 T 13-09-2016 PMA3_RS28710 cd9231ac622f8d7a8b20754d6ec7ec2c 341 SUPERFAMILY SSF53850 21 329 1.8E-69 T 13-09-2016 PMA3_RS28710 cd9231ac622f8d7a8b20754d6ec7ec2c 341 PANTHER PTHR30006 25 339 3.4E-129 T 13-09-2016 PMA3_RS28710 cd9231ac622f8d7a8b20754d6ec7ec2c 341 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 9 336 9.3E-161 T 13-09-2016 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative PMA3_RS28710 cd9231ac622f8d7a8b20754d6ec7ec2c 341 PIRSF PIRSF002825 2 332 1.3E-91 T 13-09-2016 IPR026045 Ferric binding protein PMA3_RS28710 cd9231ac622f8d7a8b20754d6ec7ec2c 341 Gene3D G3DSA:3.40.190.10 4 123 5.9E-43 T 13-09-2016 PMA3_RS28710 cd9231ac622f8d7a8b20754d6ec7ec2c 341 Gene3D G3DSA:3.40.190.10 264 323 5.9E-43 T 13-09-2016 PMA3_RS25540 d90157aff3390d8c5646136296801328 209 PANTHER PTHR10920 2 209 8.8E-119 T 13-09-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PMA3_RS25540 d90157aff3390d8c5646136296801328 209 Gene3D G3DSA:3.40.50.150 3 205 3.3E-70 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS25540 d90157aff3390d8c5646136296801328 209 Pfam PF01728 FtsJ-like methyltransferase 28 203 4.7E-57 T 13-09-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PMA3_RS25540 d90157aff3390d8c5646136296801328 209 SUPERFAMILY SSF53335 27 205 1.95E-42 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS25540 d90157aff3390d8c5646136296801328 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 30.796 T 13-09-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PMA3_RS25540 d90157aff3390d8c5646136296801328 209 PIRSF PIRSF005461 1 209 2.4E-81 T 13-09-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PMA3_RS25540 d90157aff3390d8c5646136296801328 209 PANTHER PTHR10920:SF20 2 209 8.8E-119 T 13-09-2016 PMA3_RS27470 ddf4ac5fce0a9be36530a5c78fe2ef0d 349 SUPERFAMILY SSF52418 75 340 7.06E-89 T 13-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PMA3_RS27470 ddf4ac5fce0a9be36530a5c78fe2ef0d 349 SUPERFAMILY SSF47648 1 69 1.02E-20 T 13-09-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PMA3_RS27470 ddf4ac5fce0a9be36530a5c78fe2ef0d 349 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 37.867 T 13-09-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 PMA3_RS27470 ddf4ac5fce0a9be36530a5c78fe2ef0d 349 Gene3D G3DSA:1.20.970.10 1 66 2.5E-25 T 13-09-2016 PMA3_RS27470 ddf4ac5fce0a9be36530a5c78fe2ef0d 349 Gene3D G3DSA:3.40.1030.10 75 340 1.6E-100 T 13-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PMA3_RS27470 ddf4ac5fce0a9be36530a5c78fe2ef0d 349 Pfam PF00591 Glycosyl transferase family, a/b domain 76 329 2.2E-98 T 13-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PMA3_RS27470 ddf4ac5fce0a9be36530a5c78fe2ef0d 349 PANTHER PTHR11922:SF5 1 336 1.8E-104 T 13-09-2016 PMA3_RS27470 ddf4ac5fce0a9be36530a5c78fe2ef0d 349 PANTHER PTHR11922 1 336 1.8E-104 T 13-09-2016 PMA3_RS27470 ddf4ac5fce0a9be36530a5c78fe2ef0d 349 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 337 8.0E-124 T 13-09-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 PMA3_RS27470 ddf4ac5fce0a9be36530a5c78fe2ef0d 349 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 64 4.8E-19 T 13-09-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 Gene3D G3DSA:1.10.260.40 2 53 2.8E-22 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 PANTHER PTHR30146:SF30 1 330 3.1E-135 T 13-09-2016 PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 SUPERFAMILY SSF47413 1 59 6.52E-16 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 PANTHER PTHR30146 1 330 3.1E-135 T 13-09-2016 PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 Pfam PF13377 Periplasmic binding protein-like domain 168 328 5.2E-39 T 13-09-2016 PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.6E-5 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.6E-5 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 Gene3D G3DSA:3.40.50.2300 173 308 7.5E-53 T 13-09-2016 PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 SUPERFAMILY SSF53822 61 330 1.91E-90 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 Gene3D G3DSA:3.40.50.2300 54 172 2.0E-49 T 13-09-2016 PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-16 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS09310 8c3473d3efe7d3748f6762ae7769f012 339 SMART SM00354 1 71 1.8E-31 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS29895 c70d46f296353cd23767f74e36587a30 224 Pfam PF08856 Protein of unknown function (DUF1826) 28 221 1.7E-65 T 13-09-2016 IPR014955 Protein of unknown function DUF1826 PMA3_RS15725 f110a051bcb34cd814e19e1cc76dd8e5 263 PIRSF PIRSF006648 8 256 3.1E-40 T 13-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PMA3_RS15725 f110a051bcb34cd814e19e1cc76dd8e5 263 PANTHER PTHR30294:SF13 11 250 1.4E-75 T 13-09-2016 PMA3_RS15725 f110a051bcb34cd814e19e1cc76dd8e5 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 143 167 6.2E-10 T 13-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PMA3_RS15725 f110a051bcb34cd814e19e1cc76dd8e5 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 180 199 6.2E-10 T 13-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PMA3_RS15725 f110a051bcb34cd814e19e1cc76dd8e5 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 26 47 6.2E-10 T 13-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PMA3_RS15725 f110a051bcb34cd814e19e1cc76dd8e5 263 PANTHER PTHR30294 11 250 1.4E-75 T 13-09-2016 PMA3_RS15725 f110a051bcb34cd814e19e1cc76dd8e5 263 TIGRFAM TIGR03861 phenyl_ABC_PedC: alcohol ABC transporter, permease protein 5 257 3.5E-143 T 13-09-2016 IPR022403 Alcohol ABC transporter, permease protein PMA3_RS15725 f110a051bcb34cd814e19e1cc76dd8e5 263 Pfam PF01061 ABC-2 type transporter 10 226 5.4E-36 T 13-09-2016 IPR013525 ABC-2 type transporter GO:0016020 PMA3_RS22600 d2404f57cd566aa6dc9e0d49e962a790 346 Pfam PF05145 Putative ammonia monooxygenase 33 339 2.4E-85 T 13-09-2016 IPR007820 AbrB family GO:0010468|GO:0016021 PMA3_RS22600 d2404f57cd566aa6dc9e0d49e962a790 346 PIRSF PIRSF038991 1 345 2.5E-69 T 13-09-2016 IPR007820 AbrB family GO:0010468|GO:0016021 PMA3_RS22600 d2404f57cd566aa6dc9e0d49e962a790 346 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 184 339 3.2E-42 T 13-09-2016 IPR017516 AbrB duplication PMA3_RS22600 d2404f57cd566aa6dc9e0d49e962a790 346 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 10 164 2.3E-34 T 13-09-2016 IPR017516 AbrB duplication PMA3_RS22600 d2404f57cd566aa6dc9e0d49e962a790 346 PANTHER PTHR38457:SF1 2 341 8.1E-79 T 13-09-2016 PMA3_RS22600 d2404f57cd566aa6dc9e0d49e962a790 346 PANTHER PTHR38457 2 341 8.1E-79 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Gene3D G3DSA:3.30.450.20 576 711 1.4E-17 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SMART SM00267 836 1012 5.3E-68 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SUPERFAMILY SSF55785 734 844 2.74E-23 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Gene3D G3DSA:3.30.450.20 712 830 1.3E-22 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SMART SM00091 586 652 0.52 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SMART SM00091 453 523 1.7 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SMART SM00091 722 788 3.0E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 844 1010 3.3E-41 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Gene3D G3DSA:3.30.450.20 286 312 2.4E-11 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Gene3D G3DSA:3.30.450.20 346 436 2.4E-11 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 PANTHER PTHR10799:SF774 29 42 4.2E-84 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 PANTHER PTHR10799:SF774 692 1122 4.2E-84 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SUPERFAMILY SSF55785 571 712 6.63E-15 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SMART SM00086 672 714 7.6E-4 T 13-09-2016 IPR001610 PAC motif PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SMART SM00086 531 574 1.9E-8 T 13-09-2016 IPR001610 PAC motif PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SMART SM00086 794 836 3.0E-5 T 13-09-2016 IPR001610 PAC motif PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SUPERFAMILY SSF55073 852 1013 4.71E-50 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 PANTHER PTHR10799 692 1122 4.2E-84 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 PANTHER PTHR10799 29 42 4.2E-84 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Pfam PF00990 Diguanylate cyclase, GGDEF domain 847 1008 2.1E-50 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 582 721 1.6E-11 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 726 842 3.2E-19 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 450 581 1.9E-12 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Gene3D G3DSA:3.30.70.270 848 1019 3.7E-59 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SMART SM00052 1022 1268 4.6E-128 T 13-09-2016 IPR001633 EAL domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Pfam PF13426 PAS domain 599 713 8.7E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Pfam PF13426 PAS domain 734 835 3.0E-15 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Gene3D G3DSA:3.30.450.20 437 575 4.7E-26 T 13-09-2016 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SUPERFAMILY SSF55785 347 448 1.03E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Gene3D G3DSA:3.20.20.450 1025 1274 1.2E-107 T 13-09-2016 IPR001633 EAL domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Pfam PF00563 EAL domain 1028 1263 1.1E-76 T 13-09-2016 IPR001633 EAL domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Pfam PF13188 PAS domain 296 376 0.037 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SUPERFAMILY SSF55785 438 572 2.44E-14 T 13-09-2016 IPR000014 PAS domain PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 Pfam PF08447 PAS fold 477 568 2.3E-9 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS03095 3980fd1653f8454415b5d102b071f76b 1282 SUPERFAMILY SSF141868 1027 1274 2.62E-94 T 13-09-2016 IPR001633 EAL domain PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 PANTHER PTHR30154 6 143 7.4E-34 T 13-09-2016 PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 SUPERFAMILY SSF46785 14 72 1.12E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 Gene3D G3DSA:3.30.70.920 74 137 7.3E-15 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 SMART SM00344 14 124 2.9E-24 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 SUPERFAMILY SSF54909 78 135 2.41E-10 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 60 6.5E-11 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 14 30 6.5E-11 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 41 6.5E-11 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 PANTHER PTHR30154:SF28 6 143 7.4E-34 T 13-09-2016 PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 Pfam PF01037 Lrp/AsnC ligand binding domain 82 135 2.9E-10 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 Pfam PF13404 AsnC-type helix-turn-helix domain 16 55 4.8E-13 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS09685 d2443015a8a0a87ab83bbaac55fdb1e4 165 Gene3D G3DSA:1.10.10.10 13 65 1.1E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17595 24157a19923a39341ef20c00db080f59 124 Gene3D G3DSA:3.30.700.10 7 67 8.2E-13 T 13-09-2016 PMA3_RS17595 24157a19923a39341ef20c00db080f59 124 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 8.1E-9 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS17595 24157a19923a39341ef20c00db080f59 124 Pfam PF08334 Type II secretion system (T2SS), protein G 30 73 1.8E-4 T 13-09-2016 IPR013545 Type II secretion system protein G PMA3_RS17595 24157a19923a39341ef20c00db080f59 124 PANTHER PTHR30093 1 96 1.9E-23 T 13-09-2016 PMA3_RS17595 24157a19923a39341ef20c00db080f59 124 SUPERFAMILY SSF54523 7 124 7.85E-24 T 13-09-2016 PMA3_RS17595 24157a19923a39341ef20c00db080f59 124 Pfam PF13633 Prokaryotic N-terminal methylation site 4 29 3.0E-11 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS17595 24157a19923a39341ef20c00db080f59 124 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS17595 24157a19923a39341ef20c00db080f59 124 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 5.9E-9 T 13-09-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PMA3_RS17595 24157a19923a39341ef20c00db080f59 124 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 5.9E-9 T 13-09-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PMA3_RS17595 24157a19923a39341ef20c00db080f59 124 PANTHER PTHR30093:SF6 1 96 1.9E-23 T 13-09-2016 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 248 290 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 PANTHER PTHR11019:SF134 13 295 1.8E-69 T 13-09-2016 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 SMART SM00342 211 294 6.3E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 Pfam PF06719 AraC-type transcriptional regulator N-terminus 31 182 4.9E-35 T 13-09-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 278 4.0E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 278 294 4.0E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 Pfam PF12833 Helix-turn-helix domain 217 295 3.4E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 SUPERFAMILY SSF46689 247 295 3.94E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 PANTHER PTHR11019 13 295 1.8E-69 T 13-09-2016 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 Gene3D G3DSA:1.10.10.60 248 294 1.3E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 SUPERFAMILY SSF46689 195 245 1.4E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS06775 49972f35a4ea6ec21c5cf9ee6f2d0424 296 Gene3D G3DSA:1.10.10.60 195 247 5.1E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS29060 5ec3da95fb09727d6499bb8cf9649dbc 201 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 10 193 2.0E-38 T 13-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PMA3_RS29060 5ec3da95fb09727d6499bb8cf9649dbc 201 PANTHER PTHR23407:SF1 1 198 2.4E-50 T 13-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PMA3_RS29060 5ec3da95fb09727d6499bb8cf9649dbc 201 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 193 1.2E-43 T 13-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PMA3_RS29060 5ec3da95fb09727d6499bb8cf9649dbc 201 PIRSF PIRSF006806 7 196 5.1E-33 T 13-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PMA3_RS29060 5ec3da95fb09727d6499bb8cf9649dbc 201 Gene3D G3DSA:3.40.50.10420 10 198 1.2E-51 T 13-09-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PMA3_RS29060 5ec3da95fb09727d6499bb8cf9649dbc 201 SUPERFAMILY SSF100950 9 199 3.07E-49 T 13-09-2016 PMA3_RS29060 5ec3da95fb09727d6499bb8cf9649dbc 201 PANTHER PTHR23407 1 198 2.4E-50 T 13-09-2016 PMA3_RS16070 252514c375228c6dbc5f990c02b80f0c 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 161 305 1.2E-30 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS16070 252514c375228c6dbc5f990c02b80f0c 307 Gene3D G3DSA:3.30.450.40 8 155 6.7E-7 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS16070 252514c375228c6dbc5f990c02b80f0c 307 SUPERFAMILY SSF55781 7 152 5.89E-14 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS16070 252514c375228c6dbc5f990c02b80f0c 307 SMART SM00065 3 150 5.5E-6 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS16070 252514c375228c6dbc5f990c02b80f0c 307 Pfam PF01590 GAF domain 6 137 1.8E-5 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS16070 252514c375228c6dbc5f990c02b80f0c 307 SMART SM00267 149 307 6.8E-38 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS16070 252514c375228c6dbc5f990c02b80f0c 307 Gene3D G3DSA:3.30.70.270 162 305 2.1E-34 T 13-09-2016 PMA3_RS16070 252514c375228c6dbc5f990c02b80f0c 307 SUPERFAMILY SSF55073 165 305 2.98E-34 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS16070 252514c375228c6dbc5f990c02b80f0c 307 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 157 306 4.5E-35 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS23815 0791a9e330d9dfe833e8df4e1824fb52 156 PANTHER PTHR30411:SF0 1 153 2.9E-63 T 13-09-2016 PMA3_RS23815 0791a9e330d9dfe833e8df4e1824fb52 156 Gene3D G3DSA:3.90.960.10 1 154 2.2E-56 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS23815 0791a9e330d9dfe833e8df4e1824fb52 156 PIRSF PIRSF006181 1 156 2.2E-54 T 13-09-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PMA3_RS23815 0791a9e330d9dfe833e8df4e1824fb52 156 PANTHER PTHR30411 1 153 2.9E-63 T 13-09-2016 PMA3_RS23815 0791a9e330d9dfe833e8df4e1824fb52 156 Pfam PF04073 Aminoacyl-tRNA editing domain 31 142 2.6E-24 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS23815 0791a9e330d9dfe833e8df4e1824fb52 156 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 153 5.4E-53 T 13-09-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PMA3_RS23815 0791a9e330d9dfe833e8df4e1824fb52 156 SUPERFAMILY SSF55826 2 153 8.11E-42 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 PANTHER PTHR20856:SF20 1051 1145 0.0 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 PANTHER PTHR20856:SF20 748 935 0.0 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 PANTHER PTHR20856:SF20 5 234 0.0 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Pfam PF10385 RNA polymerase beta subunit external 1 domain 596 661 4.9E-18 T 13-09-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 PANTHER PTHR20856:SF20 345 730 0.0 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:2.40.50.100 719 797 1.2E-31 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1353 0.0 T 13-09-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 227 1.8E-7 T 13-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 361 459 3.8E-15 T 13-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 PANTHER PTHR20856 5 234 0.0 T 13-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:2.40.50.150 1062 1076 5.8E-57 T 13-09-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:2.40.50.150 833 942 5.8E-57 T 13-09-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 PANTHER PTHR20856:SF20 1197 1357 0.0 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 PANTHER PTHR20856 1197 1357 0.0 T 13-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Pfam PF00562 RNA polymerase Rpb2, domain 6 722 1279 5.1E-160 T 13-09-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Pfam PF04560 RNA polymerase Rpb2, domain 7 1281 1356 4.5E-27 T 13-09-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 SUPERFAMILY SSF64484 1056 1356 0.0 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 SUPERFAMILY SSF64484 348 944 0.0 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 SUPERFAMILY SSF64484 12 230 0.0 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:3.90.1100.10 664 718 2.3E-149 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:3.90.1100.10 20 155 2.3E-149 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:3.90.1100.10 450 596 2.3E-149 T 13-09-2016 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 PANTHER PTHR20856 345 730 0.0 T 13-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Pfam PF04565 RNA polymerase Rpb2, domain 3 518 585 9.8E-31 T 13-09-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:3.90.1110.10 351 449 1.5E-67 T 13-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:3.90.1110.10 157 234 1.5E-67 T 13-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 PANTHER PTHR20856 1051 1145 0.0 T 13-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 PANTHER PTHR20856 748 935 0.0 T 13-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1357 12.322 T 13-09-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1080 1092 - T 13-09-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:2.40.270.10 1077 1257 1.6E-86 T 13-09-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:2.40.270.10 798 825 1.6E-86 T 13-09-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Gene3D G3DSA:2.30.150.10 597 661 1.3E-21 T 13-09-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS27300 6a6de8a14fbe5f431e4ed9bf0c0f5fd0 1357 Pfam PF04563 RNA polymerase beta subunit 26 504 7.4E-42 T 13-09-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PMA3_RS05140 d65d2d811010577d0962d945b9dc6215 188 PANTHER PTHR11241 1 187 6.5E-82 T 13-09-2016 PMA3_RS05140 d65d2d811010577d0962d945b9dc6215 188 PANTHER PTHR11241:SF1 1 187 6.5E-82 T 13-09-2016 PMA3_RS05140 d65d2d811010577d0962d945b9dc6215 188 SUPERFAMILY SSF51283 3 187 2.75E-53 T 13-09-2016 IPR029054 dUTPase-like PMA3_RS05140 d65d2d811010577d0962d945b9dc6215 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 28.723 T 13-09-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 PMA3_RS05140 d65d2d811010577d0962d945b9dc6215 188 Gene3D G3DSA:2.70.40.10 3 187 2.2E-69 T 13-09-2016 IPR029054 dUTPase-like PMA3_RS05140 d65d2d811010577d0962d945b9dc6215 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 3.1E-50 T 13-09-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 PMA3_RS05140 d65d2d811010577d0962d945b9dc6215 188 Pfam PF00692 dUTPase 77 184 1.1E-7 T 13-09-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 PMA3_RS06925 43d19a6d283f3421f8df9f1965339e21 212 Gene3D G3DSA:3.40.30.10 3 64 1.6E-24 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06925 43d19a6d283f3421f8df9f1965339e21 212 Gene3D G3DSA:1.10.472.60 65 171 7.6E-44 T 13-09-2016 IPR023169 UPF0413, central domain PMA3_RS06925 43d19a6d283f3421f8df9f1965339e21 212 PANTHER PTHR13887 5 207 2.7E-21 T 13-09-2016 PMA3_RS06925 43d19a6d283f3421f8df9f1965339e21 212 Pfam PF01323 DSBA-like thioredoxin domain 9 184 1.1E-11 T 13-09-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PMA3_RS06925 43d19a6d283f3421f8df9f1965339e21 212 SUPERFAMILY SSF52833 5 208 5.67E-36 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS02610 2e5d8e1d78d59adc3b7fe87742f0d6cc 436 PANTHER PTHR32305 1 179 3.5E-37 T 13-09-2016 PMA3_RS02610 2e5d8e1d78d59adc3b7fe87742f0d6cc 436 Gene3D G3DSA:2.40.50.230 293 367 8.0E-12 T 13-09-2016 IPR006531 Gp5 N-terminal PMA3_RS02610 2e5d8e1d78d59adc3b7fe87742f0d6cc 436 SUPERFAMILY SSF69279 10 183 3.0E-47 T 13-09-2016 PMA3_RS02610 2e5d8e1d78d59adc3b7fe87742f0d6cc 436 PANTHER PTHR32305:SF11 1 179 3.5E-37 T 13-09-2016 PMA3_RS02610 2e5d8e1d78d59adc3b7fe87742f0d6cc 436 SUPERFAMILY SSF69255 286 368 2.2E-13 T 13-09-2016 PMA3_RS02610 2e5d8e1d78d59adc3b7fe87742f0d6cc 436 Gene3D G3DSA:3.55.50.10 95 188 7.2E-30 T 13-09-2016 PMA3_RS02610 2e5d8e1d78d59adc3b7fe87742f0d6cc 436 SUPERFAMILY SSF69279 213 276 1.29E-8 T 13-09-2016 PMA3_RS02610 2e5d8e1d78d59adc3b7fe87742f0d6cc 436 Pfam PF05954 Phage late control gene D protein (GPD) 29 211 4.8E-40 T 13-09-2016 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 Gene3D G3DSA:3.30.450.20 267 386 9.1E-31 T 13-09-2016 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 Pfam PF08448 PAS fold 400 504 1.3E-6 T 13-09-2016 IPR013656 PAS fold-4 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 Pfam PF08447 PAS fold 290 375 3.3E-12 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 697 5.7E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 712 730 5.7E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 701 711 5.7E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SUPERFAMILY SSF47384 521 596 8.83E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SUPERFAMILY SSF55785 379 501 3.84E-14 T 13-09-2016 IPR000014 PAS domain PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 388 1.6E-21 T 13-09-2016 IPR000014 PAS domain PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 386 506 8.7E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SUPERFAMILY SSF55874 588 750 3.67E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 PANTHER PTHR24423:SF497 218 749 4.4E-205 T 13-09-2016 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 641 740 7.2E-15 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SMART SM00086 339 382 3.0E-8 T 13-09-2016 IPR001610 PAC motif PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SMART SM00086 461 503 4.2 T 13-09-2016 IPR001610 PAC motif PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SUPERFAMILY SSF55785 272 385 5.8E-27 T 13-09-2016 IPR000014 PAS domain PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SMART SM00388 525 598 3.0E-5 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 Gene3D G3DSA:3.30.450.20 387 501 2.4E-13 T 13-09-2016 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SMART SM00091 390 455 2.7E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SMART SM00091 267 333 3.2E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SMART SM00091 157 219 48.0 T 13-09-2016 IPR000014 PAS domain PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 Pfam PF00512 His Kinase A (phospho-acceptor) domain 526 596 3.2E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 PANTHER PTHR24423 218 749 4.4E-205 T 13-09-2016 PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 Gene3D G3DSA:3.30.565.10 600 750 1.6E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13970 533610eb7a6c41c64ecb83a64c8b599b 758 SMART SM00387 640 751 3.7E-26 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 PANTHER PTHR10799 164 352 6.9E-275 T 13-09-2016 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 3 948 69.595 T 13-09-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 SMART SM00487 150 340 2.0E-16 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 Gene3D G3DSA:3.40.50.300 156 335 1.2E-15 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 PANTHER PTHR10799:SF610 164 352 6.9E-275 T 13-09-2016 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 PANTHER PTHR10799:SF610 781 822 6.9E-275 T 13-09-2016 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 PANTHER PTHR10799:SF610 394 676 6.9E-275 T 13-09-2016 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 PANTHER PTHR10799:SF610 874 948 6.9E-275 T 13-09-2016 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 Gene3D G3DSA:3.40.50.300 461 612 5.7E-22 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 SUPERFAMILY SSF52540 463 632 2.43E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 SUPERFAMILY SSF52540 271 335 2.43E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 SMART SM00490 500 584 2.8E-13 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 PANTHER PTHR10799 781 822 6.9E-275 T 13-09-2016 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 Pfam PF12137 RNA polymerase recycling family C-terminal 589 946 5.4E-139 T 13-09-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 Pfam PF00176 SNF2 family N-terminal domain 119 343 2.7E-14 T 13-09-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 Pfam PF00271 Helicase conserved C-terminal domain 475 584 1.8E-12 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 PANTHER PTHR10799 394 676 6.9E-275 T 13-09-2016 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 PANTHER PTHR10799 874 948 6.9E-275 T 13-09-2016 PMA3_RS05355 0dbb02a9984ca944684f85023baa4299 948 SUPERFAMILY SSF52540 153 361 7.89E-33 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30300 26c9bb00eed92132186001a035e387dd 154 Gene3D G3DSA:3.40.1420.10 26 154 6.4E-46 T 13-09-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PMA3_RS30300 26c9bb00eed92132186001a035e387dd 154 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 36 152 2.5E-43 T 13-09-2016 PMA3_RS30300 26c9bb00eed92132186001a035e387dd 154 PIRSF PIRSF009103 1 154 3.3E-61 T 13-09-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PMA3_RS30300 26c9bb00eed92132186001a035e387dd 154 SUPERFAMILY SSF89872 25 154 3.4E-45 T 13-09-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PMA3_RS29200 6d4b99a422c8aedf1a7f4e7fecf11673 332 ProDom PD032367 ALGINATE REGULATORY ALGR3 ALGP TRANSCRIPTION TRANSCRIPTIONAL DNA-BINDING ACTIVATOR KINASES KINASE 1 123 7.0E-26 T 13-09-2016 PMA3_RS04995 6bc36ce0a9a28e0f2f0f6d1e32cd10bd 166 SUPERFAMILY SSF142433 3 157 2.75E-51 T 13-09-2016 IPR008136 CinA, C-terminal PMA3_RS04995 6bc36ce0a9a28e0f2f0f6d1e32cd10bd 166 Pfam PF02464 Competence-damaged protein 5 156 7.4E-54 T 13-09-2016 IPR008136 CinA, C-terminal PMA3_RS04995 6bc36ce0a9a28e0f2f0f6d1e32cd10bd 166 Gene3D G3DSA:3.90.950.20 2 158 9.7E-55 T 13-09-2016 IPR008136 CinA, C-terminal PMA3_RS04995 6bc36ce0a9a28e0f2f0f6d1e32cd10bd 166 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 156 2.6E-43 T 13-09-2016 IPR008136 CinA, C-terminal PMA3_RS04995 6bc36ce0a9a28e0f2f0f6d1e32cd10bd 166 PANTHER PTHR13939 3 166 1.5E-62 T 13-09-2016 PMA3_RS28490 45c0632cdd18a90f8bc47b16bd1b85d8 379 Gene3D G3DSA:3.40.50.1820 36 208 1.0E-32 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS28490 45c0632cdd18a90f8bc47b16bd1b85d8 379 Gene3D G3DSA:3.40.50.1820 241 360 1.0E-32 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS28490 45c0632cdd18a90f8bc47b16bd1b85d8 379 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 22 373 1.0E-136 T 13-09-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 PMA3_RS28490 45c0632cdd18a90f8bc47b16bd1b85d8 379 Pfam PF00561 alpha/beta hydrolase fold 51 360 6.7E-27 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS28490 45c0632cdd18a90f8bc47b16bd1b85d8 379 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 8 376 49.847 T 13-09-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 PMA3_RS28490 45c0632cdd18a90f8bc47b16bd1b85d8 379 SUPERFAMILY SSF53474 13 375 1.17E-98 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS28490 45c0632cdd18a90f8bc47b16bd1b85d8 379 PANTHER PTHR32268:SF11 1 377 7.5E-187 T 13-09-2016 PMA3_RS28490 45c0632cdd18a90f8bc47b16bd1b85d8 379 PANTHER PTHR32268 1 377 7.5E-187 T 13-09-2016 PMA3_RS28490 45c0632cdd18a90f8bc47b16bd1b85d8 379 PIRSF PIRSF000443 4 379 2.0E-132 T 13-09-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 PMA3_RS12710 0f46d8984b3d77b7c1a76ae923c5b3b6 365 PIRSF PIRSF038941 1 365 5.5E-140 T 13-09-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 PMA3_RS12710 0f46d8984b3d77b7c1a76ae923c5b3b6 365 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 268 341 6.0E-8 T 13-09-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS12710 0f46d8984b3d77b7c1a76ae923c5b3b6 365 PANTHER PTHR11482 2 365 1.9E-132 T 13-09-2016 PMA3_RS12710 0f46d8984b3d77b7c1a76ae923c5b3b6 365 Gene3D G3DSA:2.40.37.10 231 342 1.8E-18 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS12710 0f46d8984b3d77b7c1a76ae923c5b3b6 365 SUPERFAMILY SSF51419 10 239 3.11E-44 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS12710 0f46d8984b3d77b7c1a76ae923c5b3b6 365 SUPERFAMILY SSF50621 207 354 1.19E-28 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS12710 0f46d8984b3d77b7c1a76ae923c5b3b6 365 Gene3D G3DSA:3.20.20.10 29 230 4.6E-16 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS12710 0f46d8984b3d77b7c1a76ae923c5b3b6 365 PANTHER PTHR11482:SF38 2 365 1.9E-132 T 13-09-2016 PMA3_RS26925 de64d68ac3ba2895f9dfda778f017ae6 245 SUPERFAMILY SSF53850 36 237 1.63E-22 T 13-09-2016 PMA3_RS26925 de64d68ac3ba2895f9dfda778f017ae6 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 237 3.9E-9 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS26925 de64d68ac3ba2895f9dfda778f017ae6 245 PANTHER PTHR35936:SF2 1 241 1.2E-49 T 13-09-2016 PMA3_RS26925 de64d68ac3ba2895f9dfda778f017ae6 245 PANTHER PTHR35936 1 241 1.2E-49 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SUPERFAMILY SSF53850 309 528 7.81E-40 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Pfam PF00072 Response regulator receiver domain 845 957 1.5E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Gene3D G3DSA:3.30.565.10 661 820 1.8E-38 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Pfam PF00512 His Kinase A (phospho-acceptor) domain 593 659 1.5E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Gene3D G3DSA:1.10.287.130 587 655 2.9E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Gene3D G3DSA:1.20.120.160 967 1077 9.3E-16 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Gene3D G3DSA:3.40.190.10 62 174 4.4E-11 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Gene3D G3DSA:3.40.50.2300 841 960 2.4E-32 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SMART SM00388 593 659 2.5E-18 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 PANTHER PTHR24423 93 109 6.0E-136 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 PANTHER PTHR24423 572 960 6.0E-136 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SMART SM00062 310 531 3.2E-36 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SMART SM00062 67 286 3.8E-21 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 PRINTS PR00344 Bacterial sensor protein C-terminal signature 765 775 1.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 PRINTS PR00344 Bacterial sensor protein C-terminal signature 782 800 1.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 PRINTS PR00344 Bacterial sensor protein C-terminal signature 747 761 1.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 PRINTS PR00344 Bacterial sensor protein C-terminal signature 806 819 1.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SUPERFAMILY SSF47226 942 1077 1.1E-18 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SUPERFAMILY SSF53850 66 283 4.53E-31 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Pfam PF01627 Hpt domain 984 1079 1.4E-7 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 312 526 7.8E-34 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 71 283 9.8E-23 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SUPERFAMILY SSF52172 841 961 1.85E-32 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 PANTHER PTHR24423:SF382 93 109 6.0E-136 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 PANTHER PTHR24423:SF382 572 960 6.0E-136 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SMART SM00448 843 959 6.7E-30 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SUPERFAMILY SSF47384 577 660 1.67E-17 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SUPERFAMILY SSF55874 649 820 1.24E-39 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Gene3D G3DSA:3.40.190.10 491 527 1.9E-18 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Gene3D G3DSA:3.40.190.10 312 388 1.9E-18 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 707 820 9.5E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Gene3D G3DSA:3.40.190.10 175 238 1.8E-4 T 13-09-2016 PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 SMART SM00387 706 822 2.6E-31 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS20095 45cf34c5d71183c7f4431b9b30aa4eda 1084 Gene3D G3DSA:3.40.190.10 389 485 1.2E-12 T 13-09-2016 PMA3_RS02545 3be6191265dfa93c03281c21798b6cd7 336 PIRSF PIRSF006621 3 327 1.5E-103 T 13-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS02545 3be6191265dfa93c03281c21798b6cd7 336 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 13-09-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS02545 3be6191265dfa93c03281c21798b6cd7 336 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 4 324 50.074 T 13-09-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 PMA3_RS02545 3be6191265dfa93c03281c21798b6cd7 336 SUPERFAMILY SSF51395 14 321 6.96E-90 T 13-09-2016 PMA3_RS02545 3be6191265dfa93c03281c21798b6cd7 336 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 6 320 1.1E-124 T 13-09-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 PMA3_RS02545 3be6191265dfa93c03281c21798b6cd7 336 PANTHER PTHR11082:SF25 5 326 6.9E-142 T 13-09-2016 PMA3_RS02545 3be6191265dfa93c03281c21798b6cd7 336 Gene3D G3DSA:3.20.20.70 11 248 1.5E-82 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS02545 3be6191265dfa93c03281c21798b6cd7 336 Pfam PF01207 Dihydrouridine synthase (Dus) 16 317 2.3E-106 T 13-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS02545 3be6191265dfa93c03281c21798b6cd7 336 PANTHER PTHR11082 5 326 6.9E-142 T 13-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS02545 3be6191265dfa93c03281c21798b6cd7 336 Gene3D G3DSA:1.10.1200.80 257 323 1.1E-20 T 13-09-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 PMA3_RS25225 89b1411cbd9051de7969a05f847d6a43 123 SUPERFAMILY SSF50685 26 119 6.63E-12 T 13-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PMA3_RS25225 89b1411cbd9051de7969a05f847d6a43 123 PANTHER PTHR34183 19 123 1.5E-48 T 13-09-2016 PMA3_RS25225 89b1411cbd9051de7969a05f847d6a43 123 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 32 122 1.3E-42 T 13-09-2016 IPR012997 Rare lipoprotein A PMA3_RS25225 89b1411cbd9051de7969a05f847d6a43 123 ProDom PD068376 ORF2 SECRETED GLNII PRECURSOR SIGNAL 39 85 0.004 T 13-09-2016 PMA3_RS25225 89b1411cbd9051de7969a05f847d6a43 123 PANTHER PTHR34183:SF2 19 123 1.5E-48 T 13-09-2016 PMA3_RS25225 89b1411cbd9051de7969a05f847d6a43 123 Gene3D G3DSA:2.40.40.10 66 120 2.5E-5 T 13-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PMA3_RS25225 89b1411cbd9051de7969a05f847d6a43 123 Pfam PF03330 Lytic transglycolase 31 119 7.2E-25 T 13-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PMA3_RS21810 224dab35c687a6165c3fc840babd4a6b 261 PANTHER PTHR30435 1 261 5.7E-132 T 13-09-2016 PMA3_RS21810 224dab35c687a6165c3fc840babd4a6b 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-09-2016 IPR019776 Flagellar basal body rod protein, conserved site PMA3_RS21810 224dab35c687a6165c3fc840babd4a6b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 1.2E-30 T 13-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PMA3_RS21810 224dab35c687a6165c3fc840babd4a6b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 2.7E-49 T 13-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PMA3_RS21810 224dab35c687a6165c3fc840babd4a6b 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 2.4E-116 T 13-09-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 PMA3_RS21810 224dab35c687a6165c3fc840babd4a6b 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 257 1.1E-24 T 13-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PMA3_RS21810 224dab35c687a6165c3fc840babd4a6b 261 Pfam PF00460 Flagella basal body rod protein 5 35 2.2E-12 T 13-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PMA3_RS21810 224dab35c687a6165c3fc840babd4a6b 261 PANTHER PTHR30435:SF19 1 261 5.7E-132 T 13-09-2016 PMA3_RS21810 224dab35c687a6165c3fc840babd4a6b 261 SUPERFAMILY SSF117143 92 222 3.79E-36 T 13-09-2016 PMA3_RS12790 d6150a46ab74fba1491b7bb02da2bf11 140 Pfam PF13328 HD domain 8 82 1.0E-8 T 13-09-2016 IPR003607 HD/PDEase domain PMA3_RS12790 d6150a46ab74fba1491b7bb02da2bf11 140 SUPERFAMILY SSF109604 3 131 3.45E-25 T 13-09-2016 PMA3_RS03525 67f06f1cbd0a323d3db5b98633120b97 287 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 42 233 4.8E-41 T 13-09-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN PMA3_RS03525 67f06f1cbd0a323d3db5b98633120b97 287 SUPERFAMILY SSF159501 24 266 4.18E-68 T 13-09-2016 PMA3_RS03525 67f06f1cbd0a323d3db5b98633120b97 287 PIRSF PIRSF020419 3 279 7.2E-98 T 13-09-2016 IPR016773 Ferric uptake regulator, CjrA, predicted PMA3_RS29545 4b861acb8de87cf0061f13391130cd95 240 PANTHER PTHR11953:SF0 1 238 4.5E-87 T 13-09-2016 PMA3_RS29545 4b861acb8de87cf0061f13391130cd95 240 SUPERFAMILY SSF54211 2 183 2.83E-46 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS29545 4b861acb8de87cf0061f13391130cd95 240 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 13-09-2016 IPR018336 Ribonuclease PH, conserved site PMA3_RS29545 4b861acb8de87cf0061f13391130cd95 240 PANTHER PTHR11953 1 238 4.5E-87 T 13-09-2016 PMA3_RS29545 4b861acb8de87cf0061f13391130cd95 240 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 2.6E-27 T 13-09-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PMA3_RS29545 4b861acb8de87cf0061f13391130cd95 240 Hamap MF_00564 Ribonuclease PH [rph]. 2 239 48.655 T 13-09-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 PMA3_RS29545 4b861acb8de87cf0061f13391130cd95 240 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 238 2.5E-112 T 13-09-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 PMA3_RS29545 4b861acb8de87cf0061f13391130cd95 240 Pfam PF03725 3' exoribonuclease family, domain 2 160 226 6.9E-12 T 13-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PMA3_RS29545 4b861acb8de87cf0061f13391130cd95 240 Gene3D G3DSA:3.30.230.70 8 239 1.9E-36 T 13-09-2016 IPR027408 PNPase/RNase PH domain PMA3_RS29545 4b861acb8de87cf0061f13391130cd95 240 SUPERFAMILY SSF55666 154 239 1.7E-26 T 13-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 Gene3D G3DSA:3.40.50.300 578 807 7.1E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 178 230 3.6E-15 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 103 149 3.7E-5 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 658 676 - T 13-09-2016 IPR028299 ClpA/B, conserved site 2 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 SUPERFAMILY SSF52540 245 521 2.97E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 3.7E-41 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 702 720 3.7E-41 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 735 749 3.7E-41 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 628 646 3.7E-41 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 Gene3D G3DSA:1.10.1780.10 90 232 6.1E-31 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 382 394 - T 13-09-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 Gene3D G3DSA:1.10.8.60 808 894 1.3E-25 T 13-09-2016 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 SUPERFAMILY SSF81923 89 231 2.85E-25 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 798 877 2.4E-20 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 289 422 1.7E-15 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 Gene3D G3DSA:1.10.8.60 431 515 2.3E-33 T 13-09-2016 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 Pfam PF07724 AAA domain (Cdc48 subfamily) 623 792 3.7E-52 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 SMART SM01086 798 889 9.3E-27 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 Gene3D G3DSA:3.40.50.300 246 429 4.5E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 SUPERFAMILY SSF52540 573 874 2.41E-78 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 PANTHER PTHR11638 78 911 0.0 T 13-09-2016 PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 SMART SM00382 284 432 5.4E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 SMART SM00382 624 780 3.6E-13 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS14580 e40585234bdb98c8d7be7d6d1e2b3c17 920 PANTHER PTHR11638:SF80 78 911 0.0 T 13-09-2016 PMA3_RS24760 5c369e95c464a94a011b639c5413a62e 108 Pfam PF11804 Protein of unknown function (DUF3325) 2 101 1.6E-35 T 13-09-2016 IPR021762 Protein of unknown function DUF3325 PMA3_RS29265 8c4ae3e12bb7288e54cd74bef5d26246 947 Pfam PF01295 Adenylate cyclase, class-I 245 802 1.2E-115 T 13-09-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 PMA3_RS29265 8c4ae3e12bb7288e54cd74bef5d26246 947 Pfam PF12633 Adenylate cyclase NT domain 20 217 4.6E-75 T 13-09-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 PMA3_RS29265 8c4ae3e12bb7288e54cd74bef5d26246 947 PANTHER PTHR38760 17 869 4.1E-261 T 13-09-2016 PMA3_RS29265 8c4ae3e12bb7288e54cd74bef5d26246 947 PIRSF PIRSF001444 16 914 3.1E-268 T 13-09-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 Hamap MF_00641 Malate synthase G [glcB]. 1 727 389.41 T 13-09-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 PANTHER PTHR21631:SF7 498 725 1.0E-135 T 13-09-2016 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 Gene3D G3DSA:1.20.1220.12 592 725 1.6E-71 T 13-09-2016 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 PANTHER PTHR21631:SF7 31 41 1.0E-135 T 13-09-2016 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 PANTHER PTHR21631 31 41 1.0E-135 T 13-09-2016 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 Gene3D G3DSA:3.20.20.360 266 296 3.6E-142 T 13-09-2016 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 Gene3D G3DSA:3.20.20.360 89 135 3.6E-142 T 13-09-2016 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 Gene3D G3DSA:3.20.20.360 336 589 3.6E-142 T 13-09-2016 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 PANTHER PTHR21631 498 725 1.0E-135 T 13-09-2016 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 Pfam PF01274 Malate synthase 18 698 3.7E-175 T 13-09-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 Gene3D G3DSA:2.170.170.11 298 335 5.3E-69 T 13-09-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 Gene3D G3DSA:2.170.170.11 136 264 5.3E-69 T 13-09-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 SUPERFAMILY SSF51645 2 724 8.11E-295 T 13-09-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 5 724 0.0 T 13-09-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS16675 7061ce9c4a5f4d718335ed3c7d9ac380 727 Gene3D G3DSA:1.10.1860.10 2 88 1.0E-34 T 13-09-2016 PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 SUPERFAMILY SSF52467 161 362 6.33E-35 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 PANTHER PTHR18968:SF120 1 553 9.5E-260 T 13-09-2016 PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 Gene3D G3DSA:3.40.50.1220 189 332 4.8E-33 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 536 1.2E-42 T 13-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 329 7.9E-27 T 13-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 SUPERFAMILY SSF52518 7 183 1.81E-53 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 Gene3D G3DSA:3.40.50.970 6 179 1.0E-61 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 SUPERFAMILY SSF52518 368 546 3.22E-61 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 175 3.4E-53 T 13-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 PANTHER PTHR18968 1 553 9.5E-260 T 13-09-2016 PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 Gene3D G3DSA:3.40.50.970 366 546 1.9E-63 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS19220 d622b68dac117536bd3dc802be9a1e94 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 426 445 - T 13-09-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 PANTHER PTHR11741 1 285 4.8E-110 T 13-09-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 Gene3D G3DSA:1.10.286.20 184 228 1.6E-12 T 13-09-2016 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 Gene3D G3DSA:3.30.479.20 142 178 1.2E-25 T 13-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 Gene3D G3DSA:3.30.479.20 229 264 1.2E-25 T 13-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 Pfam PF00889 Elongation factor TS 71 265 1.4E-53 T 13-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 SUPERFAMILY SSF54713 141 282 6.15E-45 T 13-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 SUPERFAMILY SSF46934 4 54 1.53E-16 T 13-09-2016 IPR009060 UBA-like GO:0005515 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 Gene3D G3DSA:1.10.8.10 2 55 1.0E-24 T 13-09-2016 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 13-09-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 13-09-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 69.291 T 13-09-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 9.5E-94 T 13-09-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PMA3_RS04830 eac9d4431b7c4ebc93577baf6c800158 287 SUPERFAMILY SSF54713 56 139 1.31E-12 T 13-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PMA3_RS12265 407f536ab6730c727e10fbd0a9782d74 67 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 18 67 5.0E-22 T 13-09-2016 IPR012667 Cobalt transporter subunit CbtB, putative PMA3_RS12265 407f536ab6730c727e10fbd0a9782d74 67 TIGRFAM TIGR02459 CbtB: cobalt transporter subunit CbtB (proposed) 13 67 9.6E-27 T 13-09-2016 IPR012667 Cobalt transporter subunit CbtB, putative PMA3_RS12680 41900ea88ea6fbf11de788c3800454e6 353 Pfam PF13437 HlyD family secretion protein 200 279 4.8E-5 T 13-09-2016 PMA3_RS12680 41900ea88ea6fbf11de788c3800454e6 353 SUPERFAMILY SSF111369 43 80 9.94E-12 T 13-09-2016 PMA3_RS12680 41900ea88ea6fbf11de788c3800454e6 353 SUPERFAMILY SSF111369 109 163 9.94E-12 T 13-09-2016 PMA3_RS12680 41900ea88ea6fbf11de788c3800454e6 353 SUPERFAMILY SSF111369 179 246 5.23E-7 T 13-09-2016 PMA3_RS12680 41900ea88ea6fbf11de788c3800454e6 353 Pfam PF13533 Biotin-lipoyl like 44 88 2.7E-12 T 13-09-2016 PMA3_RS12680 41900ea88ea6fbf11de788c3800454e6 353 PANTHER PTHR30367 4 353 1.0E-141 T 13-09-2016 PMA3_RS12680 41900ea88ea6fbf11de788c3800454e6 353 PANTHER PTHR30367:SF6 4 353 1.0E-141 T 13-09-2016 PMA3_RS12680 41900ea88ea6fbf11de788c3800454e6 353 Gene3D G3DSA:2.40.50.100 44 77 2.6E-18 T 13-09-2016 PMA3_RS12680 41900ea88ea6fbf11de788c3800454e6 353 Gene3D G3DSA:2.40.50.100 197 229 2.6E-18 T 13-09-2016 PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 SUPERFAMILY SSF141868 452 699 4.71E-77 T 13-09-2016 IPR001633 EAL domain PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 SMART SM00448 13 127 2.2E-34 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 SMART SM00267 265 436 1.5E-58 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 SUPERFAMILY SSF55785 140 259 5.58E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 Pfam PF00989 PAS fold 155 204 3.7E-7 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 434 5.9E-40 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 Pfam PF00072 Response regulator receiver domain 16 127 2.0E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 SMART SM00091 152 217 2.7E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 156 259 1.0E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 SUPERFAMILY SSF52172 15 167 9.11E-41 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 SMART SM00052 446 692 5.2E-89 T 13-09-2016 IPR001633 EAL domain PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 Gene3D G3DSA:3.30.450.20 147 261 6.0E-15 T 13-09-2016 PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 Gene3D G3DSA:3.20.20.450 450 698 4.4E-81 T 13-09-2016 IPR001633 EAL domain PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 Gene3D G3DSA:3.40.50.2300 12 140 9.2E-38 T 13-09-2016 PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 PANTHER PTHR33121 424 701 4.8E-70 T 13-09-2016 PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 Gene3D G3DSA:3.30.70.270 278 443 1.4E-53 T 13-09-2016 PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 432 6.5E-42 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 SUPERFAMILY SSF55073 281 438 8.63E-48 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 Pfam PF00563 EAL domain 452 687 4.6E-65 T 13-09-2016 IPR001633 EAL domain PMA3_RS28180 0437ce37c36fe0324f9d6be07620b004 707 PANTHER PTHR33121:SF13 424 701 4.8E-70 T 13-09-2016 PMA3_RS28555 25075d5c1e0b28b3a917a2101cf82788 223 Gene3D G3DSA:3.40.50.300 1 221 4.4E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28555 25075d5c1e0b28b3a917a2101cf82788 223 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 3.4E-85 T 13-09-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 PMA3_RS28555 25075d5c1e0b28b3a917a2101cf82788 223 SUPERFAMILY SSF52540 1 220 2.37E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28555 25075d5c1e0b28b3a917a2101cf82788 223 PANTHER PTHR24220 3 220 1.2E-114 T 13-09-2016 PMA3_RS28555 25075d5c1e0b28b3a917a2101cf82788 223 SMART SM00382 27 214 3.5E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS28555 25075d5c1e0b28b3a917a2101cf82788 223 Pfam PF00005 ABC transporter 18 165 2.1E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS28555 25075d5c1e0b28b3a917a2101cf82788 223 PANTHER PTHR24220:SF470 3 220 1.2E-114 T 13-09-2016 PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 Gene3D G3DSA:3.30.365.10 576 744 5.1E-33 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 617 698 1.6E-9 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 347 579 3.1E-28 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 65 210 1.5E-10 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 SMART SM01008 233 316 5.9E-17 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 SUPERFAMILY SSF56003 348 743 1.13E-107 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 PIRSF PIRSF036389 21 746 4.3E-220 T 13-09-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 PANTHER PTHR11908:SF79 153 739 3.9E-162 T 13-09-2016 PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 PANTHER PTHR11908 153 739 3.9E-162 T 13-09-2016 PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 Gene3D G3DSA:3.90.1170.50 202 313 5.1E-20 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 SUPERFAMILY SSF56003 36 267 3.84E-38 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 Gene3D G3DSA:3.30.365.10 56 199 7.4E-31 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS13620 238634472bceb5c44fa9fd2f58095a27 746 Gene3D G3DSA:3.30.365.10 410 575 5.7E-30 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS23705 84584009ce234987a0e0b1310a939e40 189 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 187 7.3E-23 T 13-09-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PMA3_RS23705 84584009ce234987a0e0b1310a939e40 189 PANTHER PTHR30335:SF0 2 189 1.8E-35 T 13-09-2016 PMA3_RS23705 84584009ce234987a0e0b1310a939e40 189 PIRSF PIRSF006102 1 189 2.7E-20 T 13-09-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PMA3_RS23705 84584009ce234987a0e0b1310a939e40 189 PANTHER PTHR30335 2 189 1.8E-35 T 13-09-2016 PMA3_RS18045 ad631a84381d8ec638f94d1c4996c94f 675 PANTHER PTHR33362:SF1 23 387 5.0E-274 T 13-09-2016 PMA3_RS18045 ad631a84381d8ec638f94d1c4996c94f 675 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 17 669 2.6E-229 T 13-09-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein PMA3_RS18045 ad631a84381d8ec638f94d1c4996c94f 675 PANTHER PTHR33362:SF1 423 670 5.0E-274 T 13-09-2016 PMA3_RS18045 ad631a84381d8ec638f94d1c4996c94f 675 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 392 594 1.6E-28 T 13-09-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PMA3_RS18045 ad631a84381d8ec638f94d1c4996c94f 675 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 112 376 4.7E-62 T 13-09-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PMA3_RS18045 ad631a84381d8ec638f94d1c4996c94f 675 PANTHER PTHR33362 423 670 5.0E-274 T 13-09-2016 PMA3_RS18045 ad631a84381d8ec638f94d1c4996c94f 675 PANTHER PTHR33362 23 387 5.0E-274 T 13-09-2016 PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PANTHER PTHR24322:SF468 12 140 2.3E-45 T 13-09-2016 PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PANTHER PTHR24322:SF468 156 188 2.3E-45 T 13-09-2016 PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 SUPERFAMILY SSF51735 7 228 2.89E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.9E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.9E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.9E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 Pfam PF00106 short chain dehydrogenase 9 196 5.7E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PANTHER PTHR24322 12 140 2.3E-45 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PANTHER PTHR24322 156 188 2.3E-45 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 Gene3D G3DSA:3.40.50.720 9 226 6.7E-58 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PIRSF PIRSF000126 1 264 8.4E-73 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.9E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.9E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.9E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.9E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20840 8120dfc71f33df306bdd72d409f1f209 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.9E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS03755 1deb1f4479c501b6fe66acf08dd778c6 205 SUPERFAMILY SSF89392 17 200 1.8E-51 T 13-09-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX PMA3_RS03755 1deb1f4479c501b6fe66acf08dd778c6 205 Gene3D G3DSA:2.50.20.10 11 200 1.5E-61 T 13-09-2016 PMA3_RS03755 1deb1f4479c501b6fe66acf08dd778c6 205 Pfam PF03550 Outer membrane lipoprotein LolB 48 198 2.2E-50 T 13-09-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PMA3_RS03755 1deb1f4479c501b6fe66acf08dd778c6 205 PANTHER PTHR30634 12 204 1.3E-46 T 13-09-2016 PMA3_RS03755 1deb1f4479c501b6fe66acf08dd778c6 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 6 200 3.8E-76 T 13-09-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PMA3_RS03755 1deb1f4479c501b6fe66acf08dd778c6 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 200 25.513 T 13-09-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PMA3_RS03755 1deb1f4479c501b6fe66acf08dd778c6 205 PANTHER PTHR30634:SF11 12 204 1.3E-46 T 13-09-2016 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 PANTHER PTHR30314 1 395 6.7E-196 T 13-09-2016 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 Gene3D G3DSA:3.40.50.1440 14 214 5.2E-91 T 13-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 PANTHER PTHR30314:SF3 1 395 6.7E-196 T 13-09-2016 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 Gene3D G3DSA:3.30.1330.20 215 319 1.7E-45 T 13-09-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 SMART SM00864 13 205 3.5E-111 T 13-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 13-09-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 PRINTS PR00423 Cell division protein FtsZ signature 98 118 3.8E-51 T 13-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 PRINTS PR00423 Cell division protein FtsZ signature 189 211 3.8E-51 T 13-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 PRINTS PR00423 Cell division protein FtsZ signature 212 233 3.8E-51 T 13-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 PRINTS PR00423 Cell division protein FtsZ signature 126 147 3.8E-51 T 13-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.1E-38 T 13-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 340 3.9E-126 T 13-09-2016 IPR000158 Cell division protein FtsZ GO:0005525 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 13-09-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 SUPERFAMILY SSF55307 204 319 1.05E-41 T 13-09-2016 IPR008280 Tubulin/FtsZ, C-terminal PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 370 37.432 T 13-09-2016 IPR000158 Cell division protein FtsZ GO:0005525 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 Pfam PF12327 FtsZ family, C-terminal domain 222 316 3.8E-35 T 13-09-2016 IPR024757 Cell division protein FtsZ, C-terminal PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 SUPERFAMILY SSF52490 14 205 4.58E-68 T 13-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PMA3_RS04170 aa4ab20b5bff729b9bf2f296fd173719 397 SMART SM00865 207 325 5.5E-57 T 13-09-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PMA3_RS14750 2b94981cec48821d212b624847ea250b 337 Pfam PF13343 Bacterial extracellular solute-binding protein 80 312 1.8E-23 T 13-09-2016 PMA3_RS14750 2b94981cec48821d212b624847ea250b 337 Gene3D G3DSA:3.40.190.10 12 126 7.0E-30 T 13-09-2016 PMA3_RS14750 2b94981cec48821d212b624847ea250b 337 Gene3D G3DSA:3.40.190.10 270 323 7.0E-30 T 13-09-2016 PMA3_RS14750 2b94981cec48821d212b624847ea250b 337 Gene3D G3DSA:3.40.190.10 131 269 2.6E-50 T 13-09-2016 PMA3_RS14750 2b94981cec48821d212b624847ea250b 337 PIRSF PIRSF002825 8 337 2.7E-78 T 13-09-2016 IPR026045 Ferric binding protein PMA3_RS14750 2b94981cec48821d212b624847ea250b 337 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 125 142 - T 13-09-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 PMA3_RS14750 2b94981cec48821d212b624847ea250b 337 PANTHER PTHR30006 26 333 5.0E-95 T 13-09-2016 PMA3_RS14750 2b94981cec48821d212b624847ea250b 337 SUPERFAMILY SSF53850 32 329 7.11E-74 T 13-09-2016 PMA3_RS14750 2b94981cec48821d212b624847ea250b 337 PANTHER PTHR30006:SF6 26 333 5.0E-95 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 625 4.8E-13 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PANTHER PTHR22912:SF1 1 415 8.7E-161 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 282 9.2E-57 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PIRSF PIRSF037149 1 815 0.0 T 13-09-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 Gene3D G3DSA:3.30.413.10 633 769 2.7E-34 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.0E-10 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.0E-10 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.0E-10 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.0E-10 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 769 1.9E-26 T 13-09-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 SUPERFAMILY SSF56014 634 799 1.83E-50 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 Gene3D G3DSA:3.50.50.60 232 306 2.1E-11 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 SUPERFAMILY SSF51905 142 308 3.98E-29 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 799 5.4E-280 T 13-09-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 Gene3D G3DSA:3.50.50.60 2 104 5.0E-26 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 2.9E-7 T 13-09-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 2.9E-7 T 13-09-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 SUPERFAMILY SSF51905 2 190 2.85E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 SUPERFAMILY SSF55124 522 642 1.57E-24 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.3E-20 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 6.3E-20 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.3E-20 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 6.3E-20 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.3E-20 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 PANTHER PTHR22912 1 415 8.7E-161 T 13-09-2016 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 1.1E-13 T 13-09-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 Pfam PF04324 BFD-like [2Fe-2S] binding domain 488 538 1.3E-13 T 13-09-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 13-09-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS20415 f0f78a89895d469bace5041c51b555bb 817 Gene3D G3DSA:3.50.50.60 105 231 2.2E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15670 c027fa5b0e50aba7db5f3e7546b013e4 312 SUPERFAMILY SSF56281 12 308 4.06E-60 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15670 c027fa5b0e50aba7db5f3e7546b013e4 312 PANTHER PTHR11935 7 248 1.4E-21 T 13-09-2016 PMA3_RS15670 c027fa5b0e50aba7db5f3e7546b013e4 312 SMART SM00849 50 231 6.0E-21 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15670 c027fa5b0e50aba7db5f3e7546b013e4 312 Pfam PF00753 Metallo-beta-lactamase superfamily 47 231 1.0E-18 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15670 c027fa5b0e50aba7db5f3e7546b013e4 312 Gene3D G3DSA:3.60.15.10 20 256 2.1E-44 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15670 c027fa5b0e50aba7db5f3e7546b013e4 312 TIGRFAM TIGR04558 SoxH_rel_PQQ_1: quinoprotein relay system zinc metallohydrolase 1 19 303 3.2E-129 T 13-09-2016 IPR030811 Quinoprotein relay system zinc metallohydrolase 1 PMA3_RS15670 c027fa5b0e50aba7db5f3e7546b013e4 312 PANTHER PTHR11935:SF95 7 248 1.4E-21 T 13-09-2016 PMA3_RS24410 03ba6f5754442a13b1b70d0ba3046bc7 235 Gene3D G3DSA:1.10.10.10 137 234 6.8E-34 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24410 03ba6f5754442a13b1b70d0ba3046bc7 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 4.9E-26 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS24410 03ba6f5754442a13b1b70d0ba3046bc7 235 SMART SM00862 155 231 1.2E-27 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS24410 03ba6f5754442a13b1b70d0ba3046bc7 235 SMART SM00448 5 116 1.4E-39 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS24410 03ba6f5754442a13b1b70d0ba3046bc7 235 SUPERFAMILY SSF52172 3 128 1.71E-39 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS24410 03ba6f5754442a13b1b70d0ba3046bc7 235 PANTHER PTHR26402:SF50 5 231 9.1E-88 T 13-09-2016 PMA3_RS24410 03ba6f5754442a13b1b70d0ba3046bc7 235 Gene3D G3DSA:3.40.50.2300 2 124 9.6E-40 T 13-09-2016 PMA3_RS24410 03ba6f5754442a13b1b70d0ba3046bc7 235 PANTHER PTHR26402 5 231 9.1E-88 T 13-09-2016 PMA3_RS24410 03ba6f5754442a13b1b70d0ba3046bc7 235 SUPERFAMILY SSF46894 129 232 8.25E-30 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS24410 03ba6f5754442a13b1b70d0ba3046bc7 235 Pfam PF00072 Response regulator receiver domain 7 116 6.2E-24 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS20850 b8a97e1666ec3103b24dba1c94d487cc 664 Gene3D G3DSA:3.40.50.720 299 498 1.2E-40 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20850 b8a97e1666ec3103b24dba1c94d487cc 664 PANTHER PTHR10366 299 454 4.0E-126 T 13-09-2016 PMA3_RS20850 b8a97e1666ec3103b24dba1c94d487cc 664 Gene3D G3DSA:3.90.25.10 499 583 3.9E-8 T 13-09-2016 PMA3_RS20850 b8a97e1666ec3103b24dba1c94d487cc 664 PANTHER PTHR10366:SF256 299 454 4.0E-126 T 13-09-2016 PMA3_RS20850 b8a97e1666ec3103b24dba1c94d487cc 664 PANTHER PTHR10366:SF256 470 591 4.0E-126 T 13-09-2016 PMA3_RS20850 b8a97e1666ec3103b24dba1c94d487cc 664 PANTHER PTHR10366 470 591 4.0E-126 T 13-09-2016 PMA3_RS20850 b8a97e1666ec3103b24dba1c94d487cc 664 Gene3D G3DSA:3.40.50.720 155 236 4.7E-12 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20850 b8a97e1666ec3103b24dba1c94d487cc 664 SUPERFAMILY SSF51735 298 586 2.27E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20850 b8a97e1666ec3103b24dba1c94d487cc 664 SUPERFAMILY SSF51735 162 285 1.77E-14 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20850 b8a97e1666ec3103b24dba1c94d487cc 664 Pfam PF02719 Polysaccharide biosynthesis protein 300 607 9.0E-127 T 13-09-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 Gene3D G3DSA:2.60.40.420 296 380 2.4E-8 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 Gene3D G3DSA:2.60.40.420 432 454 2.4E-8 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 Gene3D G3DSA:2.60.40.420 483 653 7.7E-19 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 PANTHER PTHR11709 617 632 5.6E-20 T 13-09-2016 PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 PANTHER PTHR11709 580 599 5.6E-20 T 13-09-2016 PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 PANTHER PTHR11709:SF2 617 632 5.6E-20 T 13-09-2016 PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 PANTHER PTHR11709:SF2 667 925 5.6E-20 T 13-09-2016 PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 PANTHER PTHR11709:SF2 432 558 5.6E-20 T 13-09-2016 PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 PANTHER PTHR11709:SF2 580 599 5.6E-20 T 13-09-2016 PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 SUPERFAMILY SSF49503 284 380 2.77E-13 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 SUPERFAMILY SSF49503 432 458 2.77E-13 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 Pfam PF07731 Multicopper oxidase 791 891 7.4E-9 T 13-09-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 SUPERFAMILY SSF49503 727 905 1.31E-12 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 PANTHER PTHR11709 667 925 5.6E-20 T 13-09-2016 PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 PANTHER PTHR11709 432 558 5.6E-20 T 13-09-2016 PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 Gene3D G3DSA:2.60.40.420 798 890 7.7E-14 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 SUPERFAMILY SSF49503 482 592 1.38E-23 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS17535 106244c54d2a47018f7818aff6fbbee8 935 SUPERFAMILY SSF49503 840 902 1.38E-23 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS02275 b58b1131057183106818ad651c96e928 204 Gene3D G3DSA:3.40.50.300 5 196 1.1E-21 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02275 b58b1131057183106818ad651c96e928 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 4.8E-35 T 13-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS02275 b58b1131057183106818ad651c96e928 204 SUPERFAMILY SSF52540 4 197 2.66E-35 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02275 b58b1131057183106818ad651c96e928 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 47.148 T 13-09-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PMA3_RS02275 b58b1131057183106818ad651c96e928 204 PIRSF PIRSF005624 2 203 9.4E-45 T 13-09-2016 PMA3_RS02275 b58b1131057183106818ad651c96e928 204 PANTHER PTHR31715 1 202 7.8E-129 T 13-09-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PMA3_RS02275 b58b1131057183106818ad651c96e928 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 6 201 4.1E-101 T 13-09-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PMA3_RS19625 9e583442d9d2ac5b2e15e9f97b6850e1 148 SUPERFAMILY SSF55811 5 143 2.03E-29 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS19625 9e583442d9d2ac5b2e15e9f97b6850e1 148 Gene3D G3DSA:3.90.79.10 4 143 9.5E-34 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS19625 9e583442d9d2ac5b2e15e9f97b6850e1 148 Pfam PF00293 NUDIX domain 8 125 6.8E-17 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS19625 9e583442d9d2ac5b2e15e9f97b6850e1 148 PANTHER PTHR22769 5 136 3.1E-30 T 13-09-2016 PMA3_RS19625 9e583442d9d2ac5b2e15e9f97b6850e1 148 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 13-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PMA3_RS19625 9e583442d9d2ac5b2e15e9f97b6850e1 148 PANTHER PTHR22769:SF14 5 136 3.1E-30 T 13-09-2016 PMA3_RS07610 06389ec1bfcaa35b336a0aa9696389a3 834 PANTHER PTHR30287 8 834 6.1E-146 T 13-09-2016 PMA3_RS07610 06389ec1bfcaa35b336a0aa9696389a3 834 Pfam PF02687 FtsX-like permease family 264 369 2.6E-7 T 13-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PMA3_RS07610 06389ec1bfcaa35b336a0aa9696389a3 834 Pfam PF02687 FtsX-like permease family 715 824 1.8E-8 T 13-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 PRINTS PR00721 Stomatin signature 109 126 2.5E-62 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 PRINTS PR00721 Stomatin signature 153 171 2.5E-62 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 PRINTS PR00721 Stomatin signature 27 49 2.5E-62 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 PRINTS PR00721 Stomatin signature 74 95 2.5E-62 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 PRINTS PR00721 Stomatin signature 197 220 2.5E-62 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 PRINTS PR00721 Stomatin signature 129 152 2.5E-62 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 PRINTS PR00721 Stomatin signature 172 193 2.5E-62 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 PANTHER PTHR10264 9 243 1.2E-111 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 SUPERFAMILY SSF117892 51 184 1.44E-43 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 Pfam PF01145 SPFH domain / Band 7 family 25 193 6.7E-33 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 PANTHER PTHR10264:SF60 9 243 1.2E-111 T 13-09-2016 PMA3_RS00405 a8a974c94d316054747c8527bb3a2255 252 SMART SM00244 20 177 1.8E-62 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 514 532 1.9E-13 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 630 646 1.9E-13 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 658 674 1.9E-13 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 690 715 1.9E-13 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 Pfam PF00122 E1-E2 ATPase 100 338 1.1E-57 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 SUPERFAMILY SSF81660 354 560 6.32E-47 T 13-09-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 Gene3D G3DSA:2.70.150.10 128 242 7.3E-34 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 Gene3D G3DSA:2.70.150.10 25 67 7.3E-34 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 Pfam PF00690 Cation transporter/ATPase, N-terminus 18 82 1.4E-17 T 13-09-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 SUPERFAMILY SSF81653 134 241 6.41E-23 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PANTHER PTHR24093 15 805 1.3E-282 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PANTHER PTHR24093 824 936 1.3E-282 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 347 361 7.4E-36 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 567 7.4E-36 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 578 588 7.4E-36 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 694 7.4E-36 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 180 194 7.4E-36 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 658 677 7.4E-36 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 SUPERFAMILY SSF81665 708 934 1.07E-118 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 SUPERFAMILY SSF81665 16 133 1.07E-118 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 SUPERFAMILY SSF81665 243 341 1.07E-118 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 SUPERFAMILY SSF56784 345 365 2.59E-57 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 SUPERFAMILY SSF56784 511 774 2.59E-57 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 Pfam PF00702 haloacid dehalogenase-like hydrolase 345 672 4.0E-20 T 13-09-2016 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 349 355 - T 13-09-2016 IPR018303 P-type ATPase, phosphorylation site PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 Gene3D G3DSA:1.20.1110.10 627 931 5.1E-111 T 13-09-2016 IPR023298 P-type ATPase, transmembrane domain PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 Gene3D G3DSA:1.20.1110.10 68 127 5.1E-111 T 13-09-2016 IPR023298 P-type ATPase, transmembrane domain PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 Gene3D G3DSA:3.40.1110.10 337 563 1.3E-54 T 13-09-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 Pfam PF00689 Cation transporting ATPase, C-terminus 754 928 1.1E-48 T 13-09-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 SMART SM00831 14 88 4.3E-19 T 13-09-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 101 367 2.8E-35 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS12545 739022f9eca3249ef7099a023d347e4a 946 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 627 738 2.4E-31 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS01905 9b9e22616b43b7f0543231ffd5013af7 477 SUPERFAMILY SSF56954 32 452 3.66E-88 T 13-09-2016 PMA3_RS01905 9b9e22616b43b7f0543231ffd5013af7 477 Gene3D G3DSA:1.20.1600.10 29 441 3.8E-82 T 13-09-2016 PMA3_RS01905 9b9e22616b43b7f0543231ffd5013af7 477 PANTHER PTHR30026 21 460 2.1E-117 T 13-09-2016 PMA3_RS01905 9b9e22616b43b7f0543231ffd5013af7 477 Pfam PF02321 Outer membrane efflux protein 35 218 6.2E-24 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS01905 9b9e22616b43b7f0543231ffd5013af7 477 Pfam PF02321 Outer membrane efflux protein 244 436 5.4E-29 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS01905 9b9e22616b43b7f0543231ffd5013af7 477 PANTHER PTHR30026:SF3 21 460 2.1E-117 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS01905 9b9e22616b43b7f0543231ffd5013af7 477 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 29 451 1.6E-124 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 SUPERFAMILY SSF53850 91 295 7.76E-39 T 13-09-2016 PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 Pfam PF03466 LysR substrate binding domain 91 292 2.7E-42 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 Gene3D G3DSA:3.40.190.10 88 171 2.8E-24 T 13-09-2016 PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 PANTHER PTHR30346:SF7 1 297 2.3E-110 T 13-09-2016 PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 Gene3D G3DSA:1.10.10.10 1 84 1.5E-30 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-23 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 PANTHER PTHR30346 1 297 2.3E-110 T 13-09-2016 PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 Gene3D G3DSA:3.40.190.10 172 269 2.6E-32 T 13-09-2016 PMA3_RS01545 816523d29bd52fece96f3ec5342bd05d 299 SUPERFAMILY SSF46785 1 84 4.85E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21890 4607fe83c0bbe3cbc551806506383d0b 272 PANTHER PTHR33969:SF2 25 272 6.8E-91 T 13-09-2016 PMA3_RS21890 4607fe83c0bbe3cbc551806506383d0b 272 PANTHER PTHR33969 25 272 6.8E-91 T 13-09-2016 PMA3_RS21890 4607fe83c0bbe3cbc551806506383d0b 272 Hamap MF_01805 Segregation and condensation protein A [scpA]. 41 271 21.574 T 13-09-2016 IPR003768 Segregation and condensation protein A PMA3_RS21890 4607fe83c0bbe3cbc551806506383d0b 272 Pfam PF02616 Segregation and condensation protein ScpA 58 267 9.8E-28 T 13-09-2016 IPR003768 Segregation and condensation protein A PMA3_RS15895 ee97ced570cda7676588fbdbed3bf72f 293 PANTHER PTHR22911 1 292 6.7E-89 T 13-09-2016 PMA3_RS15895 ee97ced570cda7676588fbdbed3bf72f 293 SUPERFAMILY SSF103481 36 140 5.75E-6 T 13-09-2016 PMA3_RS15895 ee97ced570cda7676588fbdbed3bf72f 293 TIGRFAM TIGR00688 rarD: protein RarD 3 255 1.4E-56 T 13-09-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 PMA3_RS15895 ee97ced570cda7676588fbdbed3bf72f 293 PANTHER PTHR22911:SF57 1 292 6.7E-89 T 13-09-2016 PMA3_RS25120 c86a4d58f22650d2cb5e9288cca7b042 285 Gene3D G3DSA:3.40.50.300 1 154 2.3E-15 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25120 c86a4d58f22650d2cb5e9288cca7b042 285 Pfam PF03668 P-loop ATPase protein family 1 284 2.1E-92 T 13-09-2016 IPR005337 RapZ-like family GO:0005524 PMA3_RS25120 c86a4d58f22650d2cb5e9288cca7b042 285 PANTHER PTHR30448 1 284 1.2E-133 T 13-09-2016 PMA3_RS25120 c86a4d58f22650d2cb5e9288cca7b042 285 PIRSF PIRSF005052 1 285 2.2E-112 T 13-09-2016 IPR005337 RapZ-like family GO:0005524 PMA3_RS25120 c86a4d58f22650d2cb5e9288cca7b042 285 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 285 38.997 T 13-09-2016 IPR005337 RapZ-like family GO:0005524 PMA3_RS25120 c86a4d58f22650d2cb5e9288cca7b042 285 PANTHER PTHR30448:SF0 1 284 1.2E-133 T 13-09-2016 PMA3_RS25120 c86a4d58f22650d2cb5e9288cca7b042 285 SUPERFAMILY SSF52540 1 154 3.89E-13 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05855 69e97287bae1b2669ea5e6e71bf35c58 332 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 203 3.5E-47 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS05855 69e97287bae1b2669ea5e6e71bf35c58 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 2.1E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS05855 69e97287bae1b2669ea5e6e71bf35c58 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 2.1E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS05855 69e97287bae1b2669ea5e6e71bf35c58 332 PANTHER PTHR11019:SF52 7 331 8.0E-75 T 13-09-2016 PMA3_RS05855 69e97287bae1b2669ea5e6e71bf35c58 332 SUPERFAMILY SSF46689 281 330 8.96E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS05855 69e97287bae1b2669ea5e6e71bf35c58 332 SMART SM00342 245 328 2.6E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS05855 69e97287bae1b2669ea5e6e71bf35c58 332 PANTHER PTHR11019 7 331 8.0E-75 T 13-09-2016 PMA3_RS05855 69e97287bae1b2669ea5e6e71bf35c58 332 Pfam PF12833 Helix-turn-helix domain 252 330 3.2E-19 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS05855 69e97287bae1b2669ea5e6e71bf35c58 332 Gene3D G3DSA:1.10.10.60 281 330 1.7E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 7.9E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 7.9E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 PANTHER PTHR11751 20 116 1.3E-25 T 13-09-2016 PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 1.2E-20 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 SMART SM00895 100 228 3.3E-24 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 SUPERFAMILY SSF48008 97 233 2.01E-28 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 SMART SM00345 20 79 1.7E-20 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 Pfam PF07729 FCD domain 101 227 1.3E-23 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 Gene3D G3DSA:1.10.10.10 11 85 1.1E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 Gene3D G3DSA:1.20.120.530 94 234 2.3E-31 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS18015 4810edabcb9cf9a02270c5729ab54dac 236 SUPERFAMILY SSF46785 13 83 3.4E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07155 85be4fc0298fcda55a6a75d647c9f1b5 78 PANTHER PTHR34386:SF2 1 78 6.6E-24 T 13-09-2016 PMA3_RS07155 85be4fc0298fcda55a6a75d647c9f1b5 78 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 77 3.5E-15 T 13-09-2016 IPR008554 Glutaredoxin-like PMA3_RS07155 85be4fc0298fcda55a6a75d647c9f1b5 78 SUPERFAMILY SSF52833 7 77 4.9E-13 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07155 85be4fc0298fcda55a6a75d647c9f1b5 78 Gene3D G3DSA:3.40.30.10 4 77 2.7E-21 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07155 85be4fc0298fcda55a6a75d647c9f1b5 78 PANTHER PTHR34386 1 78 6.6E-24 T 13-09-2016 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 Gene3D G3DSA:2.102.10.10 43 148 6.7E-34 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 PANTHER PTHR21266 22 410 1.3E-56 T 13-09-2016 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 29 54 2.1E-16 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 101 121 2.1E-16 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 80 100 2.1E-16 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 59 74 2.1E-16 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 178 200 2.1E-16 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 Gene3D G3DSA:3.90.380.10 149 355 1.1E-7 T 13-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 Pfam PF00355 Rieske [2Fe-2S] domain 44 123 2.4E-18 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 183 414 4.9E-35 T 13-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 SUPERFAMILY SSF55961 160 415 7.56E-39 T 13-09-2016 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 SUPERFAMILY SSF50022 16 155 1.05E-41 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS14215 881d6b40b74d92e01e52f320ad451030 418 PANTHER PTHR21266:SF2 22 410 1.3E-56 T 13-09-2016 PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 SMART SM00382 210 391 5.7E-6 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 SUPERFAMILY SSF54211 9 169 1.21E-37 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 SUPERFAMILY SSF52540 188 493 4.35E-43 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 Gene3D G3DSA:3.30.230.10 5 168 9.3E-37 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 1.9E-94 T 13-09-2016 IPR000523 Magnesium chelatase ChlI domain PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 PANTHER PTHR32039 1 493 3.1E-243 T 13-09-2016 PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 5.1E-45 T 13-09-2016 PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 PANTHER PTHR32039:SF7 1 493 3.1E-243 T 13-09-2016 IPR004482 Mg chelatase-related protein PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 340 352 2.3E-5 T 13-09-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 2.3E-5 T 13-09-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 2.3E-5 T 13-09-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 2.3E-5 T 13-09-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 Gene3D G3DSA:3.40.50.300 189 387 5.3E-50 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 9.6E-26 T 13-09-2016 IPR025158 Mg chelatase-related protein, C-terminal domain PMA3_RS29345 42bb5cdcbb1204ddc14cff266aca1f50 497 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 1.5E-191 T 13-09-2016 IPR004482 Mg chelatase-related protein PMA3_RS20500 ea3534072123988d2e25f7522df2f306 296 SUPERFAMILY SSF51621 8 291 1.08E-99 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS20500 ea3534072123988d2e25f7522df2f306 296 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 6 294 49.895 T 13-09-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 PMA3_RS20500 ea3534072123988d2e25f7522df2f306 296 ProSitePatterns PS00161 Isocitrate lyase signature. 123 128 - T 13-09-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 PMA3_RS20500 ea3534072123988d2e25f7522df2f306 296 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 256 3.5E-50 T 13-09-2016 PMA3_RS20500 ea3534072123988d2e25f7522df2f306 296 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 9 293 1.4E-131 T 13-09-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 PMA3_RS20500 ea3534072123988d2e25f7522df2f306 296 PANTHER PTHR21631 1 291 1.2E-159 T 13-09-2016 PMA3_RS20500 ea3534072123988d2e25f7522df2f306 296 Gene3D G3DSA:3.20.20.60 8 288 7.9E-99 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS20500 ea3534072123988d2e25f7522df2f306 296 PANTHER PTHR21631:SF4 1 291 1.2E-159 T 13-09-2016 PMA3_RS15805 627c6e640c5beb1515829980f18757a8 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 372 1.5E-81 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS15805 627c6e640c5beb1515829980f18757a8 385 PANTHER PTHR30158:SF3 1 372 8.8E-145 T 13-09-2016 PMA3_RS15805 627c6e640c5beb1515829980f18757a8 385 PANTHER PTHR30158 1 372 8.8E-145 T 13-09-2016 PMA3_RS15805 627c6e640c5beb1515829980f18757a8 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 290 1.2E-10 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS15805 627c6e640c5beb1515829980f18757a8 385 SUPERFAMILY SSF111369 49 296 1.11E-78 T 13-09-2016 PMA3_RS15805 627c6e640c5beb1515829980f18757a8 385 Gene3D G3DSA:2.40.50.100 169 203 1.1E-23 T 13-09-2016 PMA3_RS15805 627c6e640c5beb1515829980f18757a8 385 Gene3D G3DSA:2.40.50.100 61 94 1.1E-23 T 13-09-2016 PMA3_RS00850 948d7fee1f6248def19fdc3d16b07342 357 PRINTS PR00723 Subtilisin serine protease family (S8) signature 62 81 1.1E-11 T 13-09-2016 IPR015500 Peptidase S8, subtilisin-related PMA3_RS00850 948d7fee1f6248def19fdc3d16b07342 357 PRINTS PR00723 Subtilisin serine protease family (S8) signature 101 114 1.1E-11 T 13-09-2016 IPR015500 Peptidase S8, subtilisin-related PMA3_RS00850 948d7fee1f6248def19fdc3d16b07342 357 PRINTS PR00723 Subtilisin serine protease family (S8) signature 286 302 1.1E-11 T 13-09-2016 IPR015500 Peptidase S8, subtilisin-related PMA3_RS00850 948d7fee1f6248def19fdc3d16b07342 357 PANTHER PTHR10795 33 345 9.8E-35 T 13-09-2016 IPR015500 Peptidase S8, subtilisin-related PMA3_RS00850 948d7fee1f6248def19fdc3d16b07342 357 Gene3D G3DSA:3.40.50.200 32 345 4.2E-61 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS00850 948d7fee1f6248def19fdc3d16b07342 357 PANTHER PTHR10795:SF419 33 345 9.8E-35 T 13-09-2016 PMA3_RS00850 948d7fee1f6248def19fdc3d16b07342 357 SUPERFAMILY SSF52743 44 345 8.64E-57 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS00850 948d7fee1f6248def19fdc3d16b07342 357 Pfam PF00082 Subtilase family 62 336 1.6E-34 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS14805 b3540c817ca267ca5b18daa457a7ee0b 274 Gene3D G3DSA:3.40.190.10 30 111 3.9E-36 T 13-09-2016 PMA3_RS14805 b3540c817ca267ca5b18daa457a7ee0b 274 Gene3D G3DSA:3.40.190.10 222 258 3.9E-36 T 13-09-2016 PMA3_RS14805 b3540c817ca267ca5b18daa457a7ee0b 274 PANTHER PTHR18966:SF191 17 258 1.5E-39 T 13-09-2016 PMA3_RS14805 b3540c817ca267ca5b18daa457a7ee0b 274 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 13-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PMA3_RS14805 b3540c817ca267ca5b18daa457a7ee0b 274 Gene3D G3DSA:3.40.190.10 112 221 3.5E-20 T 13-09-2016 PMA3_RS14805 b3540c817ca267ca5b18daa457a7ee0b 274 PANTHER PTHR18966 17 258 1.5E-39 T 13-09-2016 PMA3_RS14805 b3540c817ca267ca5b18daa457a7ee0b 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 258 9.8E-55 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS14805 b3540c817ca267ca5b18daa457a7ee0b 274 SMART SM00062 33 262 4.1E-43 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS14805 b3540c817ca267ca5b18daa457a7ee0b 274 SUPERFAMILY SSF53850 5 258 4.35E-54 T 13-09-2016 PMA3_RS01735 4b5068b67a4a99dac271f13d9379fed6 494 Pfam PF00474 Sodium:solute symporter family 35 437 1.8E-134 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS01735 4b5068b67a4a99dac271f13d9379fed6 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 13-09-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PMA3_RS01735 4b5068b67a4a99dac271f13d9379fed6 494 PANTHER PTHR11819 4 470 7.0E-193 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS01735 4b5068b67a4a99dac271f13d9379fed6 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 487 4.9E-222 T 13-09-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 PMA3_RS01735 4b5068b67a4a99dac271f13d9379fed6 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 7.5E-118 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS01735 4b5068b67a4a99dac271f13d9379fed6 494 PANTHER PTHR11819:SF148 4 470 7.0E-193 T 13-09-2016 PMA3_RS27515 380b46c636778a32190ac1253bbc28eb 374 Pfam PF08402 TOBE domain 290 367 3.6E-17 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS27515 380b46c636778a32190ac1253bbc28eb 374 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 46 365 9.7E-117 T 13-09-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PMA3_RS27515 380b46c636778a32190ac1253bbc28eb 374 SUPERFAMILY SSF52540 14 254 2.59E-86 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27515 380b46c636778a32190ac1253bbc28eb 374 Gene3D G3DSA:3.40.50.300 10 250 1.2E-79 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27515 380b46c636778a32190ac1253bbc28eb 374 Pfam PF00005 ABC transporter 32 173 7.4E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS27515 380b46c636778a32190ac1253bbc28eb 374 PANTHER PTHR24220:SF402 16 365 1.2E-218 T 13-09-2016 PMA3_RS27515 380b46c636778a32190ac1253bbc28eb 374 SUPERFAMILY SSF50331 248 367 4.99E-20 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS27515 380b46c636778a32190ac1253bbc28eb 374 SMART SM00382 40 223 3.3E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS27515 380b46c636778a32190ac1253bbc28eb 374 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS27515 380b46c636778a32190ac1253bbc28eb 374 PANTHER PTHR24220 16 365 1.2E-218 T 13-09-2016 PMA3_RS20790 c7b4934d7f6faa86d8afaca6dd05ab56 232 Gene3D G3DSA:1.10.10.10 130 227 1.3E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20790 c7b4934d7f6faa86d8afaca6dd05ab56 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 6.0E-22 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS20790 c7b4934d7f6faa86d8afaca6dd05ab56 232 SUPERFAMILY SSF52172 5 183 8.4E-38 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS20790 c7b4934d7f6faa86d8afaca6dd05ab56 232 SMART SM00862 150 226 1.3E-22 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS20790 c7b4934d7f6faa86d8afaca6dd05ab56 232 Gene3D G3DSA:3.40.50.2300 2 123 1.1E-35 T 13-09-2016 PMA3_RS20790 c7b4934d7f6faa86d8afaca6dd05ab56 232 SMART SM00448 5 115 2.1E-37 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS20790 c7b4934d7f6faa86d8afaca6dd05ab56 232 PANTHER PTHR26402 5 226 2.9E-143 T 13-09-2016 PMA3_RS20790 c7b4934d7f6faa86d8afaca6dd05ab56 232 PANTHER PTHR26402:SF516 5 226 2.9E-143 T 13-09-2016 PMA3_RS20790 c7b4934d7f6faa86d8afaca6dd05ab56 232 Pfam PF00072 Response regulator receiver domain 7 115 1.3E-25 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 Pfam PF00106 short chain dehydrogenase 6 195 1.2E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.3E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.3E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.3E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.3E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 6.1E-6 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.1E-6 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 6.1E-6 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PANTHER PTHR24322:SF554 10 144 1.3E-78 T 13-09-2016 PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PANTHER PTHR24322:SF554 162 193 1.3E-78 T 13-09-2016 PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PANTHER PTHR24322 10 144 1.3E-78 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 PANTHER PTHR24322 162 193 1.3E-78 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 Gene3D G3DSA:3.40.50.720 1 240 9.6E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27980 66acf87fd1ac60c2a2dd3463c7dbe0d2 274 SUPERFAMILY SSF51735 1 241 8.8E-52 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 Gene3D G3DSA:3.40.50.300 4 194 1.0E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 SMART SM00341 525 605 3.4E-20 T 13-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 Pfam PF16124 RecQ zinc-binding 335 396 1.8E-19 T 13-09-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 SUPERFAMILY SSF52540 5 189 4.02E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 456 1.2E-152 T 13-09-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 SMART SM00490 242 323 3.9E-23 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 SMART SM00487 14 210 8.6E-28 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 PANTHER PTHR13710 1 595 1.8E-277 T 13-09-2016 PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 Gene3D G3DSA:3.40.50.300 198 336 1.1E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 Gene3D G3DSA:1.10.10.10 337 510 9.6E-59 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 PANTHER PTHR13710:SF81 1 595 1.8E-277 T 13-09-2016 PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 SUPERFAMILY SSF52540 200 446 2.26E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 Pfam PF00271 Helicase conserved C-terminal domain 218 322 6.6E-15 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 595 8.2E-246 T 13-09-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 Pfam PF00270 DEAD/DEAH box helicase 22 180 3.8E-18 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 Pfam PF09382 RQC domain 401 510 9.0E-37 T 13-09-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 Pfam PF00570 HRDC domain 530 595 7.1E-23 T 13-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 SUPERFAMILY SSF47819 524 600 2.05E-22 T 13-09-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 Gene3D G3DSA:1.10.150.80 529 596 8.2E-20 T 13-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PMA3_RS21985 c642b8cb94ef029f7100ab24f3fd2e26 708 SMART SM00956 404 507 1.5E-49 T 13-09-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 PMA3_RS29320 858c0b7448a4d0d0e0178ac414fd0280 445 Pfam PF00909 Ammonium Transporter Family 38 443 4.9E-118 T 13-09-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PMA3_RS29320 858c0b7448a4d0d0e0178ac414fd0280 445 Gene3D G3DSA:1.10.3430.10 30 424 5.1E-142 T 13-09-2016 IPR029020 Ammonium/urea transporter PMA3_RS29320 858c0b7448a4d0d0e0178ac414fd0280 445 TIGRFAM TIGR00836 amt: ammonium transporter 36 443 1.9E-142 T 13-09-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PMA3_RS29320 858c0b7448a4d0d0e0178ac414fd0280 445 ProSitePatterns PS01219 Ammonium transporters signature. 201 226 - T 13-09-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PMA3_RS29320 858c0b7448a4d0d0e0178ac414fd0280 445 PANTHER PTHR11730:SF17 11 445 9.4E-188 T 13-09-2016 PMA3_RS29320 858c0b7448a4d0d0e0178ac414fd0280 445 SUPERFAMILY SSF111352 32 424 3.01E-130 T 13-09-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PMA3_RS29320 858c0b7448a4d0d0e0178ac414fd0280 445 PANTHER PTHR11730 11 445 9.4E-188 T 13-09-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PMA3_RS08800 ae4b091b0e7496f1dc0ad8fe16c5c2e1 432 SUPERFAMILY SSF103473 14 426 4.19E-81 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS08800 ae4b091b0e7496f1dc0ad8fe16c5c2e1 432 Gene3D G3DSA:1.20.1250.20 17 220 3.3E-42 T 13-09-2016 PMA3_RS08800 ae4b091b0e7496f1dc0ad8fe16c5c2e1 432 PANTHER PTHR11662 16 425 8.7E-144 T 13-09-2016 PMA3_RS08800 ae4b091b0e7496f1dc0ad8fe16c5c2e1 432 Gene3D G3DSA:1.20.1250.20 231 426 2.7E-19 T 13-09-2016 PMA3_RS08800 ae4b091b0e7496f1dc0ad8fe16c5c2e1 432 PANTHER PTHR11662:SF3 16 425 8.7E-144 T 13-09-2016 PMA3_RS08800 ae4b091b0e7496f1dc0ad8fe16c5c2e1 432 Pfam PF07690 Major Facilitator Superfamily 28 276 2.2E-35 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.0E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 PANTHER PTHR30419:SF11 1 295 9.5E-127 T 13-09-2016 PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 Gene3D G3DSA:3.40.190.10 115 183 9.0E-11 T 13-09-2016 PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 Pfam PF03466 LysR substrate binding domain 92 288 5.3E-29 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 Gene3D G3DSA:1.10.10.10 3 84 2.0E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 SUPERFAMILY SSF46785 3 87 8.71E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 PANTHER PTHR30419 1 295 9.5E-127 T 13-09-2016 PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 Gene3D G3DSA:3.40.190.10 184 255 1.7E-8 T 13-09-2016 PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 SUPERFAMILY SSF53850 94 294 1.19E-31 T 13-09-2016 PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.1E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.1E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS01895 c426efc473d52781f663ce4b1243f431 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.1E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18025 8e53282a113c38291199456253c05eef 450 SUPERFAMILY SSF51604 144 420 4.57E-83 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS18025 8e53282a113c38291199456253c05eef 450 PANTHER PTHR13794:SF47 12 157 5.7E-287 T 13-09-2016 PMA3_RS18025 8e53282a113c38291199456253c05eef 450 PANTHER PTHR13794 12 157 5.7E-287 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS18025 8e53282a113c38291199456253c05eef 450 Gene3D G3DSA:3.30.390.10 39 127 9.8E-9 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS18025 8e53282a113c38291199456253c05eef 450 Gene3D G3DSA:3.20.20.120 128 402 1.2E-101 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS18025 8e53282a113c38291199456253c05eef 450 SUPERFAMILY SSF54826 13 142 9.26E-32 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS18025 8e53282a113c38291199456253c05eef 450 Pfam PF13378 Enolase C-terminal domain-like 194 409 3.3E-36 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS18025 8e53282a113c38291199456253c05eef 450 SMART SM00922 190 290 3.2E-16 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS18025 8e53282a113c38291199456253c05eef 450 PANTHER PTHR13794:SF47 178 435 5.7E-287 T 13-09-2016 PMA3_RS18025 8e53282a113c38291199456253c05eef 450 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 11 450 6.3E-263 T 13-09-2016 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499|UniPathway: UPA00564 PMA3_RS18025 8e53282a113c38291199456253c05eef 450 PANTHER PTHR13794 178 435 5.7E-287 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS14995 1ad3d4c161c6b07cf3b5c649946cbc99 469 Gene3D G3DSA:3.90.1150.10 350 467 2.5E-8 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS14995 1ad3d4c161c6b07cf3b5c649946cbc99 469 PANTHER PTHR11751:SF314 86 467 3.6E-181 T 13-09-2016 PMA3_RS14995 1ad3d4c161c6b07cf3b5c649946cbc99 469 PANTHER PTHR11751 86 467 3.6E-181 T 13-09-2016 PMA3_RS14995 1ad3d4c161c6b07cf3b5c649946cbc99 469 Pfam PF00155 Aminotransferase class I and II 147 457 3.7E-28 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS14995 1ad3d4c161c6b07cf3b5c649946cbc99 469 SUPERFAMILY SSF53383 97 467 6.19E-94 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS14995 1ad3d4c161c6b07cf3b5c649946cbc99 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 6.4E-13 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14995 1ad3d4c161c6b07cf3b5c649946cbc99 469 SUPERFAMILY SSF46785 2 75 1.22E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14995 1ad3d4c161c6b07cf3b5c649946cbc99 469 Gene3D G3DSA:1.10.10.10 1 67 1.1E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14995 1ad3d4c161c6b07cf3b5c649946cbc99 469 Gene3D G3DSA:3.40.640.10 146 349 2.8E-69 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS14995 1ad3d4c161c6b07cf3b5c649946cbc99 469 SMART SM00345 7 66 1.3E-14 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS19795 bada2a8331f741c5c4faa325b755748c 365 PANTHER PTHR24220:SF151 5 297 4.9E-89 T 13-09-2016 PMA3_RS19795 bada2a8331f741c5c4faa325b755748c 365 SUPERFAMILY SSF52540 6 251 8.06E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19795 bada2a8331f741c5c4faa325b755748c 365 SMART SM00382 34 226 4.0E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS19795 bada2a8331f741c5c4faa325b755748c 365 Gene3D G3DSA:3.40.50.300 3 239 7.3E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19795 bada2a8331f741c5c4faa325b755748c 365 Gene3D G3DSA:2.40.50.140 288 342 1.0E-10 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS19795 bada2a8331f741c5c4faa325b755748c 365 SUPERFAMILY SSF50331 243 357 2.43E-16 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS19795 bada2a8331f741c5c4faa325b755748c 365 Pfam PF08402 TOBE domain 285 354 5.9E-8 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS19795 bada2a8331f741c5c4faa325b755748c 365 Pfam PF00005 ABC transporter 33 168 2.3E-20 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS19795 bada2a8331f741c5c4faa325b755748c 365 PANTHER PTHR24220 5 297 4.9E-89 T 13-09-2016 PMA3_RS01615 2c51166798d806c39960665f356b4f03 415 Gene3D G3DSA:3.50.50.60 5 198 5.8E-19 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS01615 2c51166798d806c39960665f356b4f03 415 PANTHER PTHR10617:SF113 7 409 3.8E-110 T 13-09-2016 PMA3_RS01615 2c51166798d806c39960665f356b4f03 415 Gene3D G3DSA:3.30.9.10 199 334 3.1E-14 T 13-09-2016 PMA3_RS01615 2c51166798d806c39960665f356b4f03 415 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 3.4E-6 T 13-09-2016 PMA3_RS01615 2c51166798d806c39960665f356b4f03 415 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 3.4E-6 T 13-09-2016 PMA3_RS01615 2c51166798d806c39960665f356b4f03 415 PANTHER PTHR10617 7 409 3.8E-110 T 13-09-2016 PMA3_RS01615 2c51166798d806c39960665f356b4f03 415 SUPERFAMILY SSF51905 286 365 7.17E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS01615 2c51166798d806c39960665f356b4f03 415 SUPERFAMILY SSF51905 8 178 7.17E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS01615 2c51166798d806c39960665f356b4f03 415 Pfam PF01494 FAD binding domain 10 333 1.1E-14 T 13-09-2016 IPR002938 FAD-binding domain GO:0071949 PMA3_RS02170 5ef706c3fe20bd3bda21df230f891f30 1091 Gene3D G3DSA:3.90.260.10 177 248 1.0E-9 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS02170 5ef706c3fe20bd3bda21df230f891f30 1091 SUPERFAMILY SSF54001 8 337 4.21E-75 T 13-09-2016 PMA3_RS02170 5ef706c3fe20bd3bda21df230f891f30 1091 Pfam PF01841 Transglutaminase-like superfamily 130 246 9.7E-20 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS02170 5ef706c3fe20bd3bda21df230f891f30 1091 PANTHER PTHR33490:SF1 2 509 3.6E-243 T 13-09-2016 PMA3_RS02170 5ef706c3fe20bd3bda21df230f891f30 1091 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1089 0.0 T 13-09-2016 IPR018667 Domain of unknown function DUF2126 PMA3_RS02170 5ef706c3fe20bd3bda21df230f891f30 1091 PANTHER PTHR33490 2 509 3.6E-243 T 13-09-2016 PMA3_RS02170 5ef706c3fe20bd3bda21df230f891f30 1091 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 84 1.4E-27 T 13-09-2016 IPR013589 Bacterial transglutaminase-like, N-terminal PMA3_RS02170 5ef706c3fe20bd3bda21df230f891f30 1091 SMART SM00460 172 248 1.5E-18 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 Gene3D G3DSA:3.30.70.1450 389 436 2.4E-6 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 PANTHER PTHR13789:SF225 415 439 3.3E-92 T 13-09-2016 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 PANTHER PTHR13789:SF225 1 169 3.3E-92 T 13-09-2016 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 Pfam PF02080 TrkA-C domain 389 450 6.1E-12 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 Pfam PF02080 TrkA-C domain 155 224 1.6E-12 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 SUPERFAMILY SSF116726 361 445 1.01E-9 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 Gene3D G3DSA:3.30.70.1450 154 224 2.2E-5 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 Gene3D G3DSA:3.40.50.720 1 151 1.1E-46 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 Gene3D G3DSA:3.40.50.720 232 375 1.1E-39 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 SUPERFAMILY SSF51735 232 375 1.55E-34 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.6E-29 T 13-09-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.6E-29 T 13-09-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.6E-29 T 13-09-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.6E-29 T 13-09-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.6E-29 T 13-09-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 SUPERFAMILY SSF116726 135 221 3.92E-11 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 Pfam PF02254 TrkA-N domain 3 124 1.7E-26 T 13-09-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 Pfam PF02254 TrkA-N domain 234 349 7.6E-26 T 13-09-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 PANTHER PTHR13789 415 439 3.3E-92 T 13-09-2016 PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 SUPERFAMILY SSF51735 1 150 1.79E-33 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30160 1dc07db715425317d113a99033814ae2 457 PANTHER PTHR13789 1 169 3.3E-92 T 13-09-2016 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 Pfam PF00375 Sodium:dicarboxylate symporter family 10 402 7.6E-101 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 PANTHER PTHR11958 1 419 3.2E-251 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 Gene3D G3DSA:1.10.3860.10 6 406 4.8E-105 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 SUPERFAMILY SSF118215 10 403 7.72E-108 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 PANTHER PTHR11958:SF47 1 419 3.2E-251 T 13-09-2016 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 4.2E-29 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 4.2E-29 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 4.2E-29 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 4.2E-29 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 4.2E-29 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 4.2E-29 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS03085 84325051813eb5f4a2737ca5f5f9fb80 437 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 4.2E-29 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS11075 c5f222fba357727ebbe99f7a11747551 413 PANTHER PTHR13847 22 397 1.0E-62 T 13-09-2016 PMA3_RS11075 c5f222fba357727ebbe99f7a11747551 413 Gene3D G3DSA:3.30.9.10 113 170 4.9E-17 T 13-09-2016 PMA3_RS11075 c5f222fba357727ebbe99f7a11747551 413 Gene3D G3DSA:3.30.9.10 250 339 4.9E-17 T 13-09-2016 PMA3_RS11075 c5f222fba357727ebbe99f7a11747551 413 SUPERFAMILY SSF51905 340 401 7.96E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11075 c5f222fba357727ebbe99f7a11747551 413 SUPERFAMILY SSF51905 30 250 7.96E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11075 c5f222fba357727ebbe99f7a11747551 413 Gene3D G3DSA:3.50.50.60 340 399 6.0E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11075 c5f222fba357727ebbe99f7a11747551 413 Gene3D G3DSA:3.50.50.60 171 249 6.0E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11075 c5f222fba357727ebbe99f7a11747551 413 Gene3D G3DSA:3.50.50.60 22 108 6.0E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11075 c5f222fba357727ebbe99f7a11747551 413 Pfam PF01266 FAD dependent oxidoreductase 31 378 3.9E-57 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS11075 c5f222fba357727ebbe99f7a11747551 413 SUPERFAMILY SSF54373 260 340 3.79E-9 T 13-09-2016 PMA3_RS24005 1a994a0494e68316bfe12359a81ed364 191 Gene3D G3DSA:1.10.10.10 28 125 1.1E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24005 1a994a0494e68316bfe12359a81ed364 191 PANTHER PTHR33169:SF2 25 152 7.7E-27 T 13-09-2016 PMA3_RS24005 1a994a0494e68316bfe12359a81ed364 191 SUPERFAMILY SSF46785 38 158 3.5E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24005 1a994a0494e68316bfe12359a81ed364 191 Pfam PF03551 Transcriptional regulator PadR-like family 43 112 3.4E-17 T 13-09-2016 IPR005149 Transcription regulator PadR, N-terminal PMA3_RS24005 1a994a0494e68316bfe12359a81ed364 191 PANTHER PTHR33169 25 152 7.7E-27 T 13-09-2016 PMA3_RS28565 1bb496646c01c2ad4fd57aff8837de45 451 Pfam PF00675 Insulinase (Peptidase family M16) 40 167 2.2E-20 T 13-09-2016 IPR011765 Peptidase M16, N-terminal PMA3_RS28565 1bb496646c01c2ad4fd57aff8837de45 451 Gene3D G3DSA:3.30.830.10 257 442 6.0E-24 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28565 1bb496646c01c2ad4fd57aff8837de45 451 PANTHER PTHR11851:SF136 30 437 3.9E-99 T 13-09-2016 PMA3_RS28565 1bb496646c01c2ad4fd57aff8837de45 451 Gene3D G3DSA:3.30.830.10 26 245 9.8E-59 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28565 1bb496646c01c2ad4fd57aff8837de45 451 SUPERFAMILY SSF63411 254 447 2.71E-30 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS28565 1bb496646c01c2ad4fd57aff8837de45 451 Pfam PF05193 Peptidase M16 inactive domain 196 378 1.0E-27 T 13-09-2016 IPR007863 Peptidase M16, C-terminal PMA3_RS28565 1bb496646c01c2ad4fd57aff8837de45 451 PANTHER PTHR11851 30 437 3.9E-99 T 13-09-2016 PMA3_RS28565 1bb496646c01c2ad4fd57aff8837de45 451 SUPERFAMILY SSF63411 27 239 1.7E-61 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 PANTHER PTHR11751 90 113 1.5E-22 T 13-09-2016 PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 PANTHER PTHR11751 17 70 1.5E-22 T 13-09-2016 PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 68 3.1E-14 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 SMART SM00895 97 219 3.4E-18 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 SMART SM00345 9 68 1.1E-14 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 5.9E-7 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 5.9E-7 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 SUPERFAMILY SSF48008 95 220 1.99E-22 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 Gene3D G3DSA:1.10.10.10 5 69 3.3E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 Gene3D G3DSA:1.20.120.530 95 228 1.5E-23 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 SUPERFAMILY SSF46785 6 72 1.74E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06680 4d778c81be2411da39a56a98693dea37 250 Pfam PF07729 FCD domain 97 217 1.1E-21 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS24560 46b0ab4642066f1df46bf91c0a1f0309 314 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 15 237 1.1E-113 T 13-09-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 PMA3_RS24560 46b0ab4642066f1df46bf91c0a1f0309 314 Gene3D G3DSA:1.10.287.90 26 112 1.1E-34 T 13-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PMA3_RS24560 46b0ab4642066f1df46bf91c0a1f0309 314 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 147 216 2.8E-5 T 13-09-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 PMA3_RS24560 46b0ab4642066f1df46bf91c0a1f0309 314 SUPERFAMILY SSF81464 26 116 2.29E-23 T 13-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PMA3_RS24560 46b0ab4642066f1df46bf91c0a1f0309 314 SUPERFAMILY SSF49503 118 278 1.99E-49 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS24560 46b0ab4642066f1df46bf91c0a1f0309 314 PANTHER PTHR22888 1 265 2.7E-142 T 13-09-2016 PMA3_RS24560 46b0ab4642066f1df46bf91c0a1f0309 314 Gene3D G3DSA:2.60.40.420 114 277 3.5E-42 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS24560 46b0ab4642066f1df46bf91c0a1f0309 314 PANTHER PTHR22888:SF13 1 265 2.7E-142 T 13-09-2016 PMA3_RS24560 46b0ab4642066f1df46bf91c0a1f0309 314 Pfam PF06481 COX Aromatic Rich Motif 237 280 2.6E-16 T 13-09-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 PMA3_RS24560 46b0ab4642066f1df46bf91c0a1f0309 314 PIRSF PIRSF000292 1 310 6.6E-132 T 13-09-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 PMA3_RS03170 fa4875cf66dea11f65ab432aee3ecb75 322 Pfam PF00348 Polyprenyl synthetase 31 275 1.0E-71 T 13-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 PMA3_RS03170 fa4875cf66dea11f65ab432aee3ecb75 322 PANTHER PTHR12001:SF47 6 322 1.3E-120 T 13-09-2016 PMA3_RS03170 fa4875cf66dea11f65ab432aee3ecb75 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 13-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 PMA3_RS03170 fa4875cf66dea11f65ab432aee3ecb75 322 Gene3D G3DSA:1.10.600.10 4 321 5.7E-102 T 13-09-2016 IPR008949 Isoprenoid synthase domain PMA3_RS03170 fa4875cf66dea11f65ab432aee3ecb75 322 SUPERFAMILY SSF48576 5 321 1.87E-99 T 13-09-2016 IPR008949 Isoprenoid synthase domain PMA3_RS03170 fa4875cf66dea11f65ab432aee3ecb75 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 13-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 PMA3_RS03170 fa4875cf66dea11f65ab432aee3ecb75 322 PANTHER PTHR12001 6 322 1.3E-120 T 13-09-2016 IPR017446 Polyprenyl synthetase-related PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 Gene3D G3DSA:3.40.50.720 12 257 6.9E-80 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 254 6.1E-60 T 13-09-2016 PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.0E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.0E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.0E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 2.0E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.0E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.0E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.5E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.5E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.5E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PANTHER PTHR24321:SF6 11 257 1.3E-48 T 13-09-2016 PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 SUPERFAMILY SSF51735 15 258 3.91E-76 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 PANTHER PTHR24321 11 257 1.3E-48 T 13-09-2016 PMA3_RS11590 1823bdc224e0c15eee804aa57c8179e5 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 Gene3D G3DSA:1.10.1160.10 274 349 4.2E-35 T 13-09-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 PANTHER PTHR11451:SF29 278 565 8.3E-225 T 13-09-2016 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 PANTHER PTHR11451:SF29 7 258 8.3E-225 T 13-09-2016 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 PRINTS PR00987 Glutamyl-tRNA synthetase signature 71 84 1.6E-6 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 PRINTS PR00987 Glutamyl-tRNA synthetase signature 221 231 1.6E-6 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 54 1.6E-6 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 SUPERFAMILY SSF50715 351 562 2.3E-70 T 13-09-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 38 332 1.3E-106 T 13-09-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 PANTHER PTHR11451 278 565 8.3E-225 T 13-09-2016 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 PANTHER PTHR11451 7 258 8.3E-225 T 13-09-2016 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 Gene3D G3DSA:3.40.50.620 223 273 9.7E-42 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 Gene3D G3DSA:3.40.50.620 38 107 9.7E-42 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 13-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 40 563 5.7E-233 T 13-09-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 Gene3D G3DSA:3.90.800.10 112 220 4.1E-46 T 13-09-2016 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 SUPERFAMILY SSF52374 39 357 6.7E-98 T 13-09-2016 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 Gene3D G3DSA:2.40.240.10 359 470 1.1E-45 T 13-09-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 351 542 1.3E-60 T 13-09-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 Gene3D G3DSA:2.40.240.10 471 561 3.5E-32 T 13-09-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PMA3_RS19815 dea08fdf80686ed0dbc18d149e1c4b6d 565 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 11 563 54.33 T 13-09-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 PMA3_RS26515 0db1a8ffaf7bc871afedccae2136ff11 65 Gene3D G3DSA:3.30.70.100 2 63 1.9E-19 T 13-09-2016 PMA3_RS26515 0db1a8ffaf7bc871afedccae2136ff11 65 Pfam PF00403 Heavy-metal-associated domain 3 60 1.1E-10 T 13-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PMA3_RS26515 0db1a8ffaf7bc871afedccae2136ff11 65 SUPERFAMILY SSF55008 2 64 1.15E-14 T 13-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PMA3_RS26515 0db1a8ffaf7bc871afedccae2136ff11 65 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 13-09-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PMA3_RS01090 e69b7565e6836d0018f738df2839d0e8 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 6.5E-77 T 13-09-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 PMA3_RS01090 e69b7565e6836d0018f738df2839d0e8 245 Gene3D G3DSA:3.20.20.70 1 240 6.2E-88 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS01090 e69b7565e6836d0018f738df2839d0e8 245 PANTHER PTHR21235:SF15 1 239 3.2E-103 T 13-09-2016 PMA3_RS01090 e69b7565e6836d0018f738df2839d0e8 245 Pfam PF00977 Histidine biosynthesis protein 3 231 1.5E-77 T 13-09-2016 IPR006062 Histidine biosynthesis GO:0000105 PMA3_RS01090 e69b7565e6836d0018f738df2839d0e8 245 PANTHER PTHR21235 1 239 3.2E-103 T 13-09-2016 PMA3_RS01090 e69b7565e6836d0018f738df2839d0e8 245 SUPERFAMILY SSF51366 1 240 3.14E-75 T 13-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PMA3_RS01090 e69b7565e6836d0018f738df2839d0e8 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 35.648 T 13-09-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 SMART SM01358 33 288 6.5E-65 T 13-09-2016 IPR032255 Helical bimodular sensor domain PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 PANTHER PTHR32089:SF64 225 639 8.0E-129 T 13-09-2016 PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 SMART SM00304 310 362 1.7E-9 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 SMART SM00304 369 422 23.0 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 PANTHER PTHR32089 225 639 8.0E-129 T 13-09-2016 PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 Gene3D G3DSA:1.10.287.950 392 610 3.1E-59 T 13-09-2016 PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 SMART SM00283 377 638 2.9E-86 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 637 1.2E-50 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 Pfam PF16591 Helical bimodular sensor domain 33 286 2.3E-94 T 13-09-2016 IPR032255 Helical bimodular sensor domain PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 SUPERFAMILY SSF58104 330 639 1.15E-78 T 13-09-2016 PMA3_RS25805 a0b0d2f410771d8e75bf7b5fd3cac1c1 639 Pfam PF00672 HAMP domain 291 358 1.2E-12 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 SUPERFAMILY SSF46785 8 88 2.29E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 Gene3D G3DSA:3.40.190.10 97 196 2.2E-28 T 13-09-2016 PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 Gene3D G3DSA:1.10.10.10 5 88 2.2E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 TIGRFAM TIGR03418 chol_sulf_TF: putative choline sulfate-utilization transcription factor 8 298 5.6E-138 T 13-09-2016 IPR017786 Transcription factor, choline sulphate-utilisation, putative PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 3.6E-23 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 PANTHER PTHR30537:SF22 9 298 7.4E-126 T 13-09-2016 PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.5E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.5E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.5E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 PANTHER PTHR30537 9 298 7.4E-126 T 13-09-2016 PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 Pfam PF03466 LysR substrate binding domain 92 298 6.6E-37 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS30225 48f6a1be6b8cc5688ec0b54a1ab9f62a 316 SUPERFAMILY SSF53850 96 300 7.6E-38 T 13-09-2016 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SUPERFAMILY SSF52172 778 896 9.96E-38 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Pfam PF01627 Hpt domain 6 106 3.1E-15 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Pfam PF01627 Hpt domain 148 247 4.7E-13 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SUPERFAMILY SSF47226 146 266 1.83E-26 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Pfam PF01584 CheW-like domain 624 753 5.6E-22 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 PANTHER PTHR22617 411 771 2.7E-245 T 13-09-2016 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 PANTHER PTHR22617 2 343 2.7E-245 T 13-09-2016 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 PANTHER PTHR22617:SF28 411 771 2.7E-245 T 13-09-2016 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SMART SM01231 294 433 3.5E-12 T 13-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SMART SM00387 478 619 1.9E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SUPERFAMILY SSF47226 4 125 4.06E-27 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SMART SM00073 146 243 2.7E-6 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SMART SM00073 4 101 1.6E-6 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Gene3D G3DSA:3.30.565.10 434 617 3.0E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SMART SM00448 779 892 2.1E-36 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Gene3D G3DSA:2.30.30.40 710 752 4.9E-21 T 13-09-2016 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Gene3D G3DSA:2.30.30.40 619 640 4.9E-21 T 13-09-2016 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 295 432 3.2E-6 T 13-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SUPERFAMILY SSF55874 435 616 2.88E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 PANTHER PTHR22617:SF28 2 343 2.7E-245 T 13-09-2016 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SUPERFAMILY SSF50341 618 751 1.14E-23 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Gene3D G3DSA:3.40.50.2300 776 897 5.9E-39 T 13-09-2016 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 618 2.0E-15 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Gene3D G3DSA:1.10.287.560 296 349 1.0E-6 T 13-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 SMART SM00260 611 755 2.5E-25 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 597 8.4E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 8.4E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 616 8.4E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Pfam PF00072 Response regulator receiver domain 781 892 4.7E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Gene3D G3DSA:1.20.120.160 3 132 6.9E-30 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS28395 e4b58ab385d899597dbb874d51b4684f 900 Gene3D G3DSA:1.20.120.160 145 283 2.6E-32 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 Gene3D G3DSA:3.20.20.70 6 363 1.3E-121 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 379 401 7.7E-6 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 498 522 7.7E-6 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 PANTHER PTHR22893:SF25 1 420 6.1E-251 T 13-09-2016 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 SUPERFAMILY SSF51905 465 523 2.83E-21 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 SUPERFAMILY SSF51905 561 657 2.83E-21 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 Gene3D G3DSA:3.50.50.60 364 469 1.3E-25 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 Gene3D G3DSA:3.50.50.60 474 632 1.0E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 334 6.3E-86 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 SUPERFAMILY SSF51971 336 524 1.71E-42 T 13-09-2016 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 625 641 1.1E-15 T 13-09-2016 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 380 399 1.1E-15 T 13-09-2016 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 462 480 1.1E-15 T 13-09-2016 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 502 520 1.1E-15 T 13-09-2016 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 PANTHER PTHR22893 1 420 6.1E-251 T 13-09-2016 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 SUPERFAMILY SSF51395 4 365 8.18E-110 T 13-09-2016 PMA3_RS08185 4d9af1255404bed5a0783f89c91cf97c 679 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 651 1.2E-23 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS23055 84f99b18449563e0512f1ce497c6a5fd 237 SUPERFAMILY SSF100950 15 230 4.84E-57 T 13-09-2016 PMA3_RS23055 84f99b18449563e0512f1ce497c6a5fd 237 PANTHER PTHR11054 17 235 4.6E-46 T 13-09-2016 PMA3_RS23055 84f99b18449563e0512f1ce497c6a5fd 237 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 22 235 3.8E-54 T 13-09-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 PMA3_RS23055 84f99b18449563e0512f1ce497c6a5fd 237 Gene3D G3DSA:3.40.50.1360 11 235 5.9E-55 T 13-09-2016 PMA3_RS23055 84f99b18449563e0512f1ce497c6a5fd 237 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 22 228 7.9E-61 T 13-09-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 PMA3_RS01865 d44b0137e37e33cf43e782900f48177f 602 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS01865 d44b0137e37e33cf43e782900f48177f 602 Pfam PF00664 ABC transporter transmembrane region 32 305 1.2E-48 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS01865 d44b0137e37e33cf43e782900f48177f 602 Pfam PF00005 ABC transporter 372 522 2.9E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS01865 d44b0137e37e33cf43e782900f48177f 602 SUPERFAMILY SSF90123 15 340 9.16E-73 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS01865 d44b0137e37e33cf43e782900f48177f 602 SUPERFAMILY SSF52540 344 590 3.11E-92 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01865 d44b0137e37e33cf43e782900f48177f 602 PANTHER PTHR24221 13 601 8.3E-224 T 13-09-2016 PMA3_RS01865 d44b0137e37e33cf43e782900f48177f 602 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 16 594 3.4E-255 T 13-09-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 PMA3_RS01865 d44b0137e37e33cf43e782900f48177f 602 Gene3D G3DSA:3.40.50.300 354 586 3.4E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01865 d44b0137e37e33cf43e782900f48177f 602 Gene3D G3DSA:1.20.1560.10 19 342 2.0E-71 T 13-09-2016 PMA3_RS01865 d44b0137e37e33cf43e782900f48177f 602 SMART SM00382 381 568 2.5E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS22615 454499abd4bcd655f7ae5befa2eace1f 355 PANTHER PTHR30024:SF8 1 280 1.3E-18 T 13-09-2016 PMA3_RS22615 454499abd4bcd655f7ae5befa2eace1f 355 PANTHER PTHR30024 1 280 1.3E-18 T 13-09-2016 PMA3_RS22615 454499abd4bcd655f7ae5befa2eace1f 355 TIGRFAM TIGR03427 ABC_peri_uca: ABC transporter periplasmic binding protein, urea carboxylase region 27 355 3.3E-172 T 13-09-2016 IPR017793 ABC transporter, urea utilisation-associated, substrate-binding protein PMA3_RS22615 454499abd4bcd655f7ae5befa2eace1f 355 Pfam PF09084 NMT1/THI5 like 57 237 8.3E-9 T 13-09-2016 IPR015168 SsuA/THI5-like PMA3_RS22615 454499abd4bcd655f7ae5befa2eace1f 355 Gene3D G3DSA:3.40.190.10 126 235 2.8E-11 T 13-09-2016 PMA3_RS22615 454499abd4bcd655f7ae5befa2eace1f 355 SUPERFAMILY SSF53850 33 266 8.24E-35 T 13-09-2016 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 PRINTS PR00344 Bacterial sensor protein C-terminal signature 918 928 2.7E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 PRINTS PR00344 Bacterial sensor protein C-terminal signature 931 949 2.7E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 PRINTS PR00344 Bacterial sensor protein C-terminal signature 959 972 2.7E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 PRINTS PR00344 Bacterial sensor protein C-terminal signature 900 914 2.7E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 SMART SM00388 754 820 8.3E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 SUPERFAMILY SSF55874 814 974 2.49E-39 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 SUPERFAMILY SSF47384 749 820 2.55E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 PANTHER PTHR24423 25 43 3.4E-116 T 13-09-2016 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 Pfam PF00989 PAS fold 633 676 4.9E-6 T 13-09-2016 IPR013767 PAS fold GO:0006355 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 SUPERFAMILY SSF55785 629 718 1.33E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 Gene3D G3DSA:3.30.565.10 806 974 1.8E-41 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 Pfam PF00512 His Kinase A (phospho-acceptor) domain 755 817 8.1E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 631 746 8.9E-10 T 13-09-2016 IPR000014 PAS domain PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 Gene3D G3DSA:1.10.287.130 750 805 3.6E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 SMART SM00091 630 698 0.0012 T 13-09-2016 IPR000014 PAS domain PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 Gene3D G3DSA:3.30.450.20 623 738 6.2E-11 T 13-09-2016 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 SMART SM00387 863 975 4.9E-34 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 PANTHER PTHR24423 628 982 3.4E-116 T 13-09-2016 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 863 973 2.6E-20 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 PANTHER PTHR24423:SF497 25 43 3.4E-116 T 13-09-2016 PMA3_RS03480 de31ef62122fe542ead6f068b9a6190b 982 PANTHER PTHR24423:SF497 628 982 3.4E-116 T 13-09-2016 PMA3_RS09175 43797da6eb185eb88e1eb6de0779808d 263 PANTHER PTHR24220:SF266 5 260 2.5E-136 T 13-09-2016 PMA3_RS09175 43797da6eb185eb88e1eb6de0779808d 263 PANTHER PTHR24220 5 260 2.5E-136 T 13-09-2016 PMA3_RS09175 43797da6eb185eb88e1eb6de0779808d 263 Gene3D G3DSA:3.40.50.300 4 235 1.9E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09175 43797da6eb185eb88e1eb6de0779808d 263 SMART SM00382 28 223 7.8E-14 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS09175 43797da6eb185eb88e1eb6de0779808d 263 SUPERFAMILY SSF52540 4 230 1.11E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09175 43797da6eb185eb88e1eb6de0779808d 263 Pfam PF00005 ABC transporter 20 167 8.9E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS09175 43797da6eb185eb88e1eb6de0779808d 263 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS15615 885164e1ab46cd419ff0dd19251e081f 323 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 307 8.6E-73 T 13-09-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PMA3_RS15615 885164e1ab46cd419ff0dd19251e081f 323 PANTHER PTHR33376:SF6 26 319 1.1E-108 T 13-09-2016 PMA3_RS15615 885164e1ab46cd419ff0dd19251e081f 323 PIRSF PIRSF006470 1 323 1.8E-92 T 13-09-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PMA3_RS15615 885164e1ab46cd419ff0dd19251e081f 323 PANTHER PTHR33376 26 319 1.1E-108 T 13-09-2016 PMA3_RS15615 885164e1ab46cd419ff0dd19251e081f 323 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 36 285 5.8E-63 T 13-09-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PMA3_RS06030 98bb56154714f600989f4b62bea6df29 219 PANTHER PTHR11260 2 204 1.6E-82 T 13-09-2016 PMA3_RS06030 98bb56154714f600989f4b62bea6df29 219 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 192 6.9E-9 T 13-09-2016 IPR004046 Glutathione S-transferase, C-terminal PMA3_RS06030 98bb56154714f600989f4b62bea6df29 219 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 6.4E-17 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS06030 98bb56154714f600989f4b62bea6df29 219 Gene3D G3DSA:1.20.1050.10 80 196 8.8E-46 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS06030 98bb56154714f600989f4b62bea6df29 219 PANTHER PTHR11260:SF178 2 204 1.6E-82 T 13-09-2016 PMA3_RS06030 98bb56154714f600989f4b62bea6df29 219 Gene3D G3DSA:3.40.30.10 1 78 1.2E-30 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06030 98bb56154714f600989f4b62bea6df29 219 SUPERFAMILY SSF47616 82 198 6.26E-33 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS06030 98bb56154714f600989f4b62bea6df29 219 SUPERFAMILY SSF52833 1 83 2.74E-23 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS17930 f94b3a209115fd79d02195c300b83021 357 SUPERFAMILY SSF52540 4 241 7.1E-88 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17930 f94b3a209115fd79d02195c300b83021 357 SUPERFAMILY SSF50331 237 349 2.04E-12 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS17930 f94b3a209115fd79d02195c300b83021 357 SMART SM00382 28 211 1.0E-19 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS17930 f94b3a209115fd79d02195c300b83021 357 PANTHER PTHR24220:SF150 5 304 1.9E-125 T 13-09-2016 PMA3_RS17930 f94b3a209115fd79d02195c300b83021 357 PANTHER PTHR24220 5 304 1.9E-125 T 13-09-2016 PMA3_RS17930 f94b3a209115fd79d02195c300b83021 357 Pfam PF00005 ABC transporter 20 161 7.5E-36 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS17930 f94b3a209115fd79d02195c300b83021 357 Pfam PF08402 TOBE domain 277 348 9.8E-10 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS17930 f94b3a209115fd79d02195c300b83021 357 Gene3D G3DSA:3.40.50.300 4 235 1.1E-81 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17930 f94b3a209115fd79d02195c300b83021 357 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS04890 ff007006f19a470518731b3d2d5f046f 376 Gene3D G3DSA:3.40.50.2000 159 285 1.3E-4 T 13-09-2016 PMA3_RS04890 ff007006f19a470518731b3d2d5f046f 376 SUPERFAMILY SSF53756 5 372 2.47E-35 T 13-09-2016 PMA3_RS04890 ff007006f19a470518731b3d2d5f046f 376 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 3 373 41.885 T 13-09-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PMA3_RS04890 ff007006f19a470518731b3d2d5f046f 376 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 371 7.8E-127 T 13-09-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PMA3_RS04890 ff007006f19a470518731b3d2d5f046f 376 Pfam PF02684 Lipid-A-disaccharide synthetase 6 359 3.5E-117 T 13-09-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PMA3_RS04890 ff007006f19a470518731b3d2d5f046f 376 PANTHER PTHR30372 1 372 1.1E-122 T 13-09-2016 PMA3_RS04890 ff007006f19a470518731b3d2d5f046f 376 PANTHER PTHR30372:SF0 1 372 1.1E-122 T 13-09-2016 PMA3_RS07545 b1359602cd93149f3d415d510a4ce483 480 PANTHER PTHR10422:SF21 8 467 0.0 T 13-09-2016 PMA3_RS07545 b1359602cd93149f3d415d510a4ce483 480 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 13-09-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07545 b1359602cd93149f3d415d510a4ce483 480 SUPERFAMILY SSF81442 9 468 1.44E-121 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07545 b1359602cd93149f3d415d510a4ce483 480 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 443 4.5E-113 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07545 b1359602cd93149f3d415d510a4ce483 480 Gene3D G3DSA:1.20.210.10 9 470 4.8E-70 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07545 b1359602cd93149f3d415d510a4ce483 480 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 471 2.5E-225 T 13-09-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07545 b1359602cd93149f3d415d510a4ce483 480 PANTHER PTHR10422 8 467 0.0 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 PIRSF PIRSF036354 15 741 0.0 T 13-09-2016 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 Pfam PF04205 FMN-binding domain 104 191 6.4E-6 T 13-09-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 PANTHER PTHR30224 408 723 0.0 T 13-09-2016 PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 PANTHER PTHR30224:SF4 33 386 0.0 T 13-09-2016 PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 PANTHER PTHR30224:SF4 408 723 0.0 T 13-09-2016 PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 SMART SM00900 101 194 1.6E-12 T 13-09-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 SUPERFAMILY SSF54862 612 696 3.01E-6 T 13-09-2016 PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 SUPERFAMILY SSF54862 531 548 3.01E-6 T 13-09-2016 PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 PANTHER PTHR30224 33 386 0.0 T 13-09-2016 PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 Pfam PF12801 4Fe-4S binding domain 616 661 7.6E-6 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS16400 ad8ec2860da014031aa7026262966c85 756 Pfam PF12801 4Fe-4S binding domain 515 561 1.9E-14 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS10840 25c8aacc7ab4d5739b50f680db7eec0a 79 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 2.5E-31 T 13-09-2016 IPR021250 Protein of unknown function DUF2789 PMA3_RS01465 1ab173d9b63239cd57afd0762a5df281 266 SMART SM00318 35 166 4.7E-14 T 13-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PMA3_RS01465 1ab173d9b63239cd57afd0762a5df281 266 Gene3D G3DSA:2.40.50.90 34 133 5.3E-22 T 13-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PMA3_RS01465 1ab173d9b63239cd57afd0762a5df281 266 PANTHER PTHR12302:SF0 31 167 1.0E-27 T 13-09-2016 PMA3_RS01465 1ab173d9b63239cd57afd0762a5df281 266 PANTHER PTHR12302 31 167 1.0E-27 T 13-09-2016 PMA3_RS01465 1ab173d9b63239cd57afd0762a5df281 266 SUPERFAMILY SSF50199 29 168 7.45E-27 T 13-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PMA3_RS01465 1ab173d9b63239cd57afd0762a5df281 266 Pfam PF00565 Staphylococcal nuclease homologue 58 166 9.1E-14 T 13-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PMA3_RS24265 d58b967ec99c3c59955a5ce188bbb9c7 128 Pfam PF01592 NifU-like N terminal domain 2 125 4.0E-57 T 13-09-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 PMA3_RS24265 d58b967ec99c3c59955a5ce188bbb9c7 128 PANTHER PTHR10093:SF3 1 128 1.7E-99 T 13-09-2016 PMA3_RS24265 d58b967ec99c3c59955a5ce188bbb9c7 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 4.3E-69 T 13-09-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 PMA3_RS24265 d58b967ec99c3c59955a5ce188bbb9c7 128 SUPERFAMILY SSF82649 1 125 6.02E-48 T 13-09-2016 PMA3_RS24265 d58b967ec99c3c59955a5ce188bbb9c7 128 Gene3D G3DSA:3.90.1010.10 2 125 7.0E-56 T 13-09-2016 PMA3_RS24265 d58b967ec99c3c59955a5ce188bbb9c7 128 PANTHER PTHR10093 1 128 1.7E-99 T 13-09-2016 PMA3_RS08030 ac7f44a6f614d5eeff98e74fa4016e10 287 Gene3D G3DSA:3.40.190.10 190 241 3.6E-7 T 13-09-2016 PMA3_RS08030 ac7f44a6f614d5eeff98e74fa4016e10 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.3E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS08030 ac7f44a6f614d5eeff98e74fa4016e10 287 PANTHER PTHR30126 1 287 2.9E-79 T 13-09-2016 PMA3_RS08030 ac7f44a6f614d5eeff98e74fa4016e10 287 SUPERFAMILY SSF53850 87 287 4.78E-36 T 13-09-2016 PMA3_RS08030 ac7f44a6f614d5eeff98e74fa4016e10 287 Gene3D G3DSA:3.40.190.10 87 189 7.5E-25 T 13-09-2016 PMA3_RS08030 ac7f44a6f614d5eeff98e74fa4016e10 287 SUPERFAMILY SSF46785 1 110 3.21E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08030 ac7f44a6f614d5eeff98e74fa4016e10 287 Gene3D G3DSA:1.10.10.10 1 83 4.6E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08030 ac7f44a6f614d5eeff98e74fa4016e10 287 PANTHER PTHR30126:SF31 1 287 2.9E-79 T 13-09-2016 PMA3_RS08030 ac7f44a6f614d5eeff98e74fa4016e10 287 Pfam PF03466 LysR substrate binding domain 86 286 5.2E-39 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS15660 401a5a3968106bab46106eac7d9b49b2 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS15660 401a5a3968106bab46106eac7d9b49b2 506 SUPERFAMILY SSF53720 14 497 3.01E-162 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS15660 401a5a3968106bab46106eac7d9b49b2 506 Gene3D G3DSA:3.40.309.10 270 469 1.0E-60 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS15660 401a5a3968106bab46106eac7d9b49b2 506 PANTHER PTHR11699 1 506 0.0 T 13-09-2016 PMA3_RS15660 401a5a3968106bab46106eac7d9b49b2 506 Pfam PF00171 Aldehyde dehydrogenase family 32 493 1.6E-164 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS15660 401a5a3968106bab46106eac7d9b49b2 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS15660 401a5a3968106bab46106eac7d9b49b2 506 Gene3D G3DSA:3.40.605.10 18 269 5.2E-94 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS15660 401a5a3968106bab46106eac7d9b49b2 506 PANTHER PTHR11699:SF97 1 506 0.0 T 13-09-2016 PMA3_RS07770 2d5da7e0eacb623776600996cf702743 270 Gene3D G3DSA:3.40.50.300 2 247 2.8E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07770 2d5da7e0eacb623776600996cf702743 270 PANTHER PTHR13696:SF1 4 257 6.7E-89 T 13-09-2016 PMA3_RS07770 2d5da7e0eacb623776600996cf702743 270 PIRSF PIRSF003092 1 270 3.1E-89 T 13-09-2016 IPR025501 ATP binding protein MinD PMA3_RS07770 2d5da7e0eacb623776600996cf702743 270 PANTHER PTHR13696 4 257 6.7E-89 T 13-09-2016 PMA3_RS07770 2d5da7e0eacb623776600996cf702743 270 SUPERFAMILY SSF52540 2 268 9.25E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07770 2d5da7e0eacb623776600996cf702743 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 216 1.7E-26 T 13-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PMA3_RS07770 2d5da7e0eacb623776600996cf702743 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 9.6E-114 T 13-09-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 PMA3_RS28245 e773abf15c547f52ded54f27f64303cb 393 SMART SM00925 125 280 1.8E-82 T 13-09-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 PMA3_RS28245 e773abf15c547f52ded54f27f64303cb 393 Pfam PF06725 3D domain 302 373 3.0E-23 T 13-09-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 PMA3_RS28245 e773abf15c547f52ded54f27f64303cb 393 Gene3D G3DSA:2.40.40.10 191 382 3.6E-55 T 13-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PMA3_RS28245 e773abf15c547f52ded54f27f64303cb 393 Gene3D G3DSA:2.40.40.10 38 188 1.1E-26 T 13-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PMA3_RS28245 e773abf15c547f52ded54f27f64303cb 393 SUPERFAMILY SSF50685 24 380 1.81E-117 T 13-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PMA3_RS28245 e773abf15c547f52ded54f27f64303cb 393 PIRSF PIRSF019422 1 385 2.4E-113 T 13-09-2016 IPR026044 Membrane-bound lytic murein transglycosylase A PMA3_RS28245 e773abf15c547f52ded54f27f64303cb 393 Pfam PF03562 MltA specific insert domain 54 279 1.8E-72 T 13-09-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 PMA3_RS28245 e773abf15c547f52ded54f27f64303cb 393 PANTHER PTHR30124:SF0 18 382 2.6E-121 T 13-09-2016 PMA3_RS28245 e773abf15c547f52ded54f27f64303cb 393 PANTHER PTHR30124 18 382 2.6E-121 T 13-09-2016 PMA3_RS25005 abde5b1ba4bc13b5b5aa929476748c11 456 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 26 438 2.0E-102 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS25005 abde5b1ba4bc13b5b5aa929476748c11 456 PANTHER PTHR30026:SF3 3 447 5.5E-97 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS25005 abde5b1ba4bc13b5b5aa929476748c11 456 PANTHER PTHR30026 3 447 5.5E-97 T 13-09-2016 PMA3_RS25005 abde5b1ba4bc13b5b5aa929476748c11 456 Gene3D G3DSA:1.20.1600.10 25 429 1.4E-64 T 13-09-2016 PMA3_RS25005 abde5b1ba4bc13b5b5aa929476748c11 456 Pfam PF02321 Outer membrane efflux protein 31 212 4.0E-17 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS25005 abde5b1ba4bc13b5b5aa929476748c11 456 Pfam PF02321 Outer membrane efflux protein 236 423 3.4E-26 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS25005 abde5b1ba4bc13b5b5aa929476748c11 456 SUPERFAMILY SSF56954 28 438 1.7E-76 T 13-09-2016 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 PANTHER PTHR32552 124 565 6.4E-215 T 13-09-2016 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 128 858 9.5E-124 T 13-09-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 Pfam PF07715 TonB-dependent Receptor Plug Domain 142 252 1.4E-28 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 Gene3D G3DSA:2.40.170.20 258 859 3.1E-112 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 PANTHER PTHR32552 584 863 6.4E-215 T 13-09-2016 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 Pfam PF07660 Secretin and TonB N terminus short domain 70 119 7.3E-9 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 130 859 2.6E-160 T 13-09-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 PANTHER PTHR32552:SF18 584 863 6.4E-215 T 13-09-2016 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 SMART SM00965 69 120 1.6E-11 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 SUPERFAMILY SSF56935 520 859 4.4E-123 T 13-09-2016 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 SUPERFAMILY SSF56935 130 492 4.4E-123 T 13-09-2016 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 Gene3D G3DSA:2.170.130.10 139 257 5.1E-39 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 PANTHER PTHR32552:SF18 124 565 6.4E-215 T 13-09-2016 PMA3_RS23145 9013ea38791ed24083dfc2ac942fa975 863 Pfam PF00593 TonB dependent receptor 591 859 1.1E-37 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS00620 9be16da7870b7bee3f3f55b095a93a0b 260 SUPERFAMILY SSF53850 24 260 1.47E-83 T 13-09-2016 PMA3_RS00620 9be16da7870b7bee3f3f55b095a93a0b 260 PANTHER PTHR30429:SF0 1 260 1.4E-139 T 13-09-2016 PMA3_RS00620 9be16da7870b7bee3f3f55b095a93a0b 260 Pfam PF03180 NLPA lipoprotein 25 260 1.4E-99 T 13-09-2016 IPR004872 Lipoprotein NlpA family PMA3_RS00620 9be16da7870b7bee3f3f55b095a93a0b 260 PIRSF PIRSF002854 1 260 2.5E-101 T 13-09-2016 IPR004872 Lipoprotein NlpA family PMA3_RS00620 9be16da7870b7bee3f3f55b095a93a0b 260 PANTHER PTHR30429 1 260 1.4E-139 T 13-09-2016 IPR004872 Lipoprotein NlpA family PMA3_RS00620 9be16da7870b7bee3f3f55b095a93a0b 260 Gene3D G3DSA:3.40.190.10 23 151 1.8E-52 T 13-09-2016 PMA3_RS18975 c8bc073ba4bb2f91f5e80d82941fd842 538 SUPERFAMILY SSF53649 33 471 5.76E-110 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS18975 c8bc073ba4bb2f91f5e80d82941fd842 538 PANTHER PTHR10342 211 514 6.8E-230 T 13-09-2016 PMA3_RS18975 c8bc073ba4bb2f91f5e80d82941fd842 538 Pfam PF00884 Sulfatase 33 376 5.6E-68 T 13-09-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PMA3_RS18975 c8bc073ba4bb2f91f5e80d82941fd842 538 PANTHER PTHR10342:SF241 211 514 6.8E-230 T 13-09-2016 PMA3_RS18975 c8bc073ba4bb2f91f5e80d82941fd842 538 PANTHER PTHR10342:SF241 2 186 6.8E-230 T 13-09-2016 PMA3_RS18975 c8bc073ba4bb2f91f5e80d82941fd842 538 Gene3D G3DSA:3.30.1120.10 406 467 9.7E-6 T 13-09-2016 PMA3_RS18975 c8bc073ba4bb2f91f5e80d82941fd842 538 Gene3D G3DSA:3.40.720.10 33 405 1.9E-94 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS18975 c8bc073ba4bb2f91f5e80d82941fd842 538 PANTHER PTHR10342 2 186 6.8E-230 T 13-09-2016 PMA3_RS26860 129f5ddcb9d964ac1c4faeca4ba6e3a4 271 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 201 256 7.0E-20 T 13-09-2016 IPR019220 Domain of unknown function DUF2135 PMA3_RS26860 129f5ddcb9d964ac1c4faeca4ba6e3a4 271 PIRSF PIRSF012281 7 270 4.4E-112 T 13-09-2016 IPR012039 Uncharacterised conserved protein UCP012281 PMA3_RS00640 41ed38343c3f1d70b3c20050934287dd 355 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 349 2.7E-67 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS00640 41ed38343c3f1d70b3c20050934287dd 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 257 2.7E-14 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS00640 41ed38343c3f1d70b3c20050934287dd 355 Gene3D G3DSA:1.20.1600.10 93 175 3.8E-4 T 13-09-2016 PMA3_RS00640 41ed38343c3f1d70b3c20050934287dd 355 SUPERFAMILY SSF111369 45 214 1.2E-20 T 13-09-2016 PMA3_RS00640 41ed38343c3f1d70b3c20050934287dd 355 PANTHER PTHR30469:SF14 12 352 3.1E-142 T 13-09-2016 PMA3_RS00640 41ed38343c3f1d70b3c20050934287dd 355 Gene3D G3DSA:2.40.50.100 176 193 4.2E-13 T 13-09-2016 PMA3_RS00640 41ed38343c3f1d70b3c20050934287dd 355 Gene3D G3DSA:2.40.50.100 56 87 4.2E-13 T 13-09-2016 PMA3_RS00640 41ed38343c3f1d70b3c20050934287dd 355 PANTHER PTHR30469 12 352 3.1E-142 T 13-09-2016 PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 507 1.6E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 PANTHER PTHR24423:SF394 176 507 7.9E-52 T 13-09-2016 PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 PANTHER PTHR24423:SF394 1 7 7.9E-52 T 13-09-2016 PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 SUPERFAMILY SSF47384 285 353 1.59E-6 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 1.4E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 1.4E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 1.4E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 Gene3D G3DSA:1.10.287.130 285 338 5.1E-4 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 PANTHER PTHR24423 1 7 7.9E-52 T 13-09-2016 PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 Gene3D G3DSA:3.30.565.10 339 507 2.7E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 SUPERFAMILY SSF55785 164 245 3.35E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 PANTHER PTHR24423 176 507 7.9E-52 T 13-09-2016 PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 SMART SM00387 399 509 6.4E-29 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS30120 da7e94b0740151572bb17422c050f646 510 SUPERFAMILY SSF55874 347 507 1.31E-34 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS03960 f49bcf83c5b5e704258aa665de32f4de 224 Gene3D G3DSA:3.40.50.410 18 174 2.1E-13 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS03960 f49bcf83c5b5e704258aa665de32f4de 224 SMART SM00327 19 196 7.7E-11 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS03960 f49bcf83c5b5e704258aa665de32f4de 224 Pfam PF00092 von Willebrand factor type A domain 22 174 5.8E-10 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS03960 f49bcf83c5b5e704258aa665de32f4de 224 PIRSF PIRSF020634 17 220 3.7E-48 T 13-09-2016 IPR011392 Tellurite resistance, TerY PMA3_RS03960 f49bcf83c5b5e704258aa665de32f4de 224 SUPERFAMILY SSF53300 20 175 5.25E-21 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS14625 d91f01ad37ced3334383a973d56eaff5 551 Pfam PF00474 Sodium:solute symporter family 62 467 5.1E-115 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS14625 d91f01ad37ced3334383a973d56eaff5 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 176 201 - T 13-09-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PMA3_RS14625 d91f01ad37ced3334383a973d56eaff5 551 PANTHER PTHR11819:SF13 30 537 5.2E-241 T 13-09-2016 PMA3_RS14625 d91f01ad37ced3334383a973d56eaff5 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 62 464 4.7E-65 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS14625 d91f01ad37ced3334383a973d56eaff5 551 PANTHER PTHR11819 30 537 5.2E-241 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS28935 2e2d4a168cec808affa5b702a6457b0c 326 Gene3D G3DSA:3.40.190.10 118 239 2.3E-32 T 13-09-2016 PMA3_RS28935 2e2d4a168cec808affa5b702a6457b0c 326 SMART SM00062 35 251 2.7E-34 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS28935 2e2d4a168cec808affa5b702a6457b0c 326 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 36 317 3.0E-74 T 13-09-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 PMA3_RS28935 2e2d4a168cec808affa5b702a6457b0c 326 Pfam PF09084 NMT1/THI5 like 60 254 1.5E-18 T 13-09-2016 IPR015168 SsuA/THI5-like PMA3_RS28935 2e2d4a168cec808affa5b702a6457b0c 326 PANTHER PTHR30024 1 319 4.0E-139 T 13-09-2016 PMA3_RS28935 2e2d4a168cec808affa5b702a6457b0c 326 PANTHER PTHR30024:SF11 1 319 4.0E-139 T 13-09-2016 PMA3_RS28935 2e2d4a168cec808affa5b702a6457b0c 326 SUPERFAMILY SSF53850 35 259 1.29E-52 T 13-09-2016 PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 Gene3D G3DSA:1.25.40.80 146 285 9.3E-42 T 13-09-2016 PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 Gene3D G3DSA:1.10.579.10 286 470 2.9E-72 T 13-09-2016 PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 PANTHER PTHR11455:SF18 1 476 1.4E-197 T 13-09-2016 PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 Pfam PF00875 DNA photolyase 3 166 4.6E-44 T 13-09-2016 IPR006050 DNA photolyase, N-terminal PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 Gene3D G3DSA:3.40.50.620 2 145 4.0E-44 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 PRINTS PR00147 DNA photolyase signature 384 398 1.4E-22 T 13-09-2016 IPR002081 Cryptochrome/DNA photolyase class 1 PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 PRINTS PR00147 DNA photolyase signature 345 363 1.4E-22 T 13-09-2016 IPR002081 Cryptochrome/DNA photolyase class 1 PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 PRINTS PR00147 DNA photolyase signature 325 341 1.4E-22 T 13-09-2016 IPR002081 Cryptochrome/DNA photolyase class 1 PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 SUPERFAMILY SSF52425 2 186 4.19E-53 T 13-09-2016 IPR006050 DNA photolyase, N-terminal PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 13-09-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 Pfam PF03441 FAD binding domain of DNA photolyase 275 468 1.1E-78 T 13-09-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 SUPERFAMILY SSF48173 194 470 1.19E-102 T 13-09-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain PMA3_RS03810 16fe6222c8afe79fdf16a018ef28215f 481 PANTHER PTHR11455 1 476 1.4E-197 T 13-09-2016 PMA3_RS15680 c12a62ed153ede6e3783192448f2e4ad 292 Gene3D G3DSA:3.40.190.10 32 79 5.1E-14 T 13-09-2016 PMA3_RS15680 c12a62ed153ede6e3783192448f2e4ad 292 Gene3D G3DSA:3.40.190.10 194 280 5.1E-14 T 13-09-2016 PMA3_RS15680 c12a62ed153ede6e3783192448f2e4ad 292 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 281 4.9E-20 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS15680 c12a62ed153ede6e3783192448f2e4ad 292 SUPERFAMILY SSF53850 24 280 1.85E-25 T 13-09-2016 PMA3_RS15680 c12a62ed153ede6e3783192448f2e4ad 292 SMART SM00062 33 284 2.2E-5 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 Gene3D G3DSA:1.10.10.60 162 209 1.5E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 SUPERFAMILY SSF46689 210 258 9.86E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 PANTHER PTHR11019:SF98 13 262 9.5E-98 T 13-09-2016 PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 Pfam PF02311 AraC-like ligand binding domain 19 91 7.0E-8 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 Gene3D G3DSA:1.10.10.60 210 258 6.0E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 Pfam PF12833 Helix-turn-helix domain 179 256 2.8E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 Gene3D G3DSA:2.60.120.10 15 84 5.4E-9 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 SMART SM00342 173 255 1.2E-19 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 PANTHER PTHR11019 13 262 9.5E-98 T 13-09-2016 PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 239 2.6E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 255 2.6E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS02340 647a991c82ed7065947ad5a38607aafe 262 SUPERFAMILY SSF51182 9 188 1.16E-12 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS17015 5220d2eac6c8cf79a4877d9ce3db8711 124 Gene3D G3DSA:3.30.1330.40 10 123 2.7E-31 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS17015 5220d2eac6c8cf79a4877d9ce3db8711 124 SUPERFAMILY SSF55298 7 123 1.32E-31 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS17015 5220d2eac6c8cf79a4877d9ce3db8711 124 PANTHER PTHR11803 13 121 2.2E-30 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS17015 5220d2eac6c8cf79a4877d9ce3db8711 124 Pfam PF01042 Endoribonuclease L-PSP 17 121 1.2E-23 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS14485 3d002e48158d44aca8ee429ea1d90b2e 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 251 1.9E-48 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS14485 3d002e48158d44aca8ee429ea1d90b2e 253 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 13-09-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PMA3_RS14485 3d002e48158d44aca8ee429ea1d90b2e 253 PANTHER PTHR11941 5 253 3.1E-67 T 13-09-2016 PMA3_RS14485 3d002e48158d44aca8ee429ea1d90b2e 253 Gene3D G3DSA:3.90.226.10 2 253 3.1E-69 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS14485 3d002e48158d44aca8ee429ea1d90b2e 253 SUPERFAMILY SSF52096 2 252 1.43E-67 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 PANTHER PTHR24423 81 227 9.8E-48 T 13-09-2016 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 PANTHER PTHR24423 25 34 9.8E-48 T 13-09-2016 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 PANTHER PTHR24423 266 476 9.8E-48 T 13-09-2016 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 Gene3D G3DSA:3.30.565.10 335 477 3.3E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 SMART SM00388 270 334 6.0E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 SUPERFAMILY SSF55874 332 478 6.02E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 327 1.3E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 Gene3D G3DSA:1.10.287.130 271 327 3.5E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 1.5E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 1.5E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 441 1.5E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 427 1.5E-12 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 SUPERFAMILY SSF47384 266 330 3.14E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 479 2.0E-20 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17540 ebaa62c062e8e79d653ec2446282c09c 482 SMART SM00387 375 482 7.2E-28 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.2E-5 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.2E-5 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 84 3.2E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 PANTHER PTHR11751:SF436 26 110 8.2E-23 T 13-09-2016 PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 SUPERFAMILY SSF48008 91 222 1.02E-22 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 Gene3D G3DSA:1.10.10.10 16 86 5.3E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 Gene3D G3DSA:1.20.120.530 91 226 1.5E-39 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 SUPERFAMILY SSF46785 24 93 4.03E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 PANTHER PTHR11751 26 110 8.2E-23 T 13-09-2016 PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 Pfam PF07729 FCD domain 94 214 2.4E-20 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 SMART SM00345 26 84 2.6E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS00325 e96778d0e3d0429222ec027479846360 236 SMART SM00895 94 215 4.9E-15 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS07120 595a975cf6e77bfd80187c1095a10009 130 Gene3D G3DSA:3.40.50.2300 4 125 2.8E-14 T 13-09-2016 PMA3_RS07120 595a975cf6e77bfd80187c1095a10009 130 SMART SM00448 6 125 4.5E-8 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07120 595a975cf6e77bfd80187c1095a10009 130 PANTHER PTHR26402 6 73 1.0E-12 T 13-09-2016 PMA3_RS07120 595a975cf6e77bfd80187c1095a10009 130 SUPERFAMILY SSF52172 4 126 3.56E-17 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS07120 595a975cf6e77bfd80187c1095a10009 130 Pfam PF00072 Response regulator receiver domain 8 123 1.9E-10 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS28990 843c59ab2f7c52091e3a3a05f9e5026d 594 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 21 166 9.5E-13 T 13-09-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 PMA3_RS28990 843c59ab2f7c52091e3a3a05f9e5026d 594 SUPERFAMILY SSF160246 16 159 7.59E-11 T 13-09-2016 PMA3_RS28990 843c59ab2f7c52091e3a3a05f9e5026d 594 Pfam PF00437 Type II/IV secretion system protein 219 480 6.3E-75 T 13-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PMA3_RS28990 843c59ab2f7c52091e3a3a05f9e5026d 594 SUPERFAMILY SSF52540 200 588 2.11E-98 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28990 843c59ab2f7c52091e3a3a05f9e5026d 594 PANTHER PTHR30258 1 594 0.0 T 13-09-2016 PMA3_RS28990 843c59ab2f7c52091e3a3a05f9e5026d 594 Gene3D G3DSA:3.40.50.300 318 591 7.6E-94 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28990 843c59ab2f7c52091e3a3a05f9e5026d 594 PANTHER PTHR30258:SF13 1 594 0.0 T 13-09-2016 PMA3_RS28990 843c59ab2f7c52091e3a3a05f9e5026d 594 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 408 422 - T 13-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PMA3_RS28990 843c59ab2f7c52091e3a3a05f9e5026d 594 Gene3D G3DSA:3.30.450.90 195 313 1.8E-46 T 13-09-2016 PMA3_RS28990 843c59ab2f7c52091e3a3a05f9e5026d 594 SMART SM00382 341 462 4.4E-5 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25045 9f701974708fe41784b12c418ad5ca62 421 SUPERFAMILY SSF55205 1 419 7.85E-142 T 13-09-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PMA3_RS25045 9f701974708fe41784b12c418ad5ca62 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 47.728 T 13-09-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS25045 9f701974708fe41784b12c418ad5ca62 421 PANTHER PTHR21090 1 421 1.4E-205 T 13-09-2016 PMA3_RS25045 9f701974708fe41784b12c418ad5ca62 421 Gene3D G3DSA:3.65.10.10 222 418 4.3E-59 T 13-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PMA3_RS25045 9f701974708fe41784b12c418ad5ca62 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 1.3E-119 T 13-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PMA3_RS25045 9f701974708fe41784b12c418ad5ca62 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 4.3E-180 T 13-09-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS25045 9f701974708fe41784b12c418ad5ca62 421 Gene3D G3DSA:3.65.10.10 21 221 1.7E-64 T 13-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 13-09-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PANTHER PTHR22912 1 465 2.9E-262 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PIRSF PIRSF000350 1 470 8.7E-87 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 462 1.4E-39 T 13-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 2.1E-39 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 2.1E-39 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.1E-39 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 2.1E-39 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 2.1E-39 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 Gene3D G3DSA:3.50.50.60 2 147 2.6E-38 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PANTHER PTHR22912:SF131 1 465 2.9E-262 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 Gene3D G3DSA:3.30.390.30 341 471 6.0E-50 T 13-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 Gene3D G3DSA:3.50.50.60 148 340 5.7E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 1.5E-160 T 13-09-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 6.7E-71 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 SUPERFAMILY SSF55424 350 472 3.78E-42 T 13-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 SUPERFAMILY SSF51905 1 344 4.54E-61 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 3.3E-81 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 3.3E-81 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 3.3E-81 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 3.3E-81 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 3.3E-81 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 3.3E-81 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.3E-81 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 3.3E-81 T 13-09-2016 PMA3_RS21250 142656f9fc3ed53cb986509b44f81fc6 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 3.3E-81 T 13-09-2016 PMA3_RS24950 34d041145e65b893d9c417b2dac4348f 367 PANTHER PTHR22893 316 355 1.1E-212 T 13-09-2016 PMA3_RS24950 34d041145e65b893d9c417b2dac4348f 367 PANTHER PTHR22893 6 297 1.1E-212 T 13-09-2016 PMA3_RS24950 34d041145e65b893d9c417b2dac4348f 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 352 1.7E-73 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS24950 34d041145e65b893d9c417b2dac4348f 367 SUPERFAMILY SSF51395 1 353 6.48E-103 T 13-09-2016 PMA3_RS24950 34d041145e65b893d9c417b2dac4348f 367 PANTHER PTHR22893:SF9 6 297 1.1E-212 T 13-09-2016 PMA3_RS24950 34d041145e65b893d9c417b2dac4348f 367 PANTHER PTHR22893:SF9 316 355 1.1E-212 T 13-09-2016 PMA3_RS24950 34d041145e65b893d9c417b2dac4348f 367 Gene3D G3DSA:3.20.20.70 2 355 1.2E-108 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS16090 1322d44cf43b590175f322e1316878bc 280 SUPERFAMILY SSF53850 84 279 1.52E-37 T 13-09-2016 PMA3_RS16090 1322d44cf43b590175f322e1316878bc 280 SUPERFAMILY SSF46785 2 108 2.11E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16090 1322d44cf43b590175f322e1316878bc 280 Gene3D G3DSA:3.40.190.10 88 186 1.3E-17 T 13-09-2016 PMA3_RS16090 1322d44cf43b590175f322e1316878bc 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.3E-15 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16090 1322d44cf43b590175f322e1316878bc 280 PANTHER PTHR30126 1 280 4.1E-90 T 13-09-2016 PMA3_RS16090 1322d44cf43b590175f322e1316878bc 280 Gene3D G3DSA:3.40.190.10 187 242 3.3E-10 T 13-09-2016 PMA3_RS16090 1322d44cf43b590175f322e1316878bc 280 Gene3D G3DSA:1.10.10.10 2 80 1.2E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16090 1322d44cf43b590175f322e1316878bc 280 Pfam PF03466 LysR substrate binding domain 86 279 6.0E-40 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS16090 1322d44cf43b590175f322e1316878bc 280 PANTHER PTHR30126:SF31 1 280 4.1E-90 T 13-09-2016 PMA3_RS13695 53532ead3ca24dfb11bd3a3e607651ca 463 PANTHER PTHR11699 12 463 1.8E-236 T 13-09-2016 PMA3_RS13695 53532ead3ca24dfb11bd3a3e607651ca 463 Gene3D G3DSA:3.40.605.10 8 247 2.5E-74 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS13695 53532ead3ca24dfb11bd3a3e607651ca 463 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 262 273 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS13695 53532ead3ca24dfb11bd3a3e607651ca 463 PANTHER PTHR11699:SF28 12 463 1.8E-236 T 13-09-2016 PMA3_RS13695 53532ead3ca24dfb11bd3a3e607651ca 463 SUPERFAMILY SSF53720 11 461 3.93E-143 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS13695 53532ead3ca24dfb11bd3a3e607651ca 463 Pfam PF00171 Aldehyde dehydrogenase family 10 458 1.2E-140 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS13695 53532ead3ca24dfb11bd3a3e607651ca 463 Gene3D G3DSA:3.40.309.10 248 433 4.2E-61 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS11650 ebdd1eda7f938b91d6166d986155b941 401 Gene3D G3DSA:1.10.540.10 5 127 1.7E-20 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11650 ebdd1eda7f938b91d6166d986155b941 401 PANTHER PTHR10909 4 393 1.0E-111 T 13-09-2016 PMA3_RS11650 ebdd1eda7f938b91d6166d986155b941 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 390 8.6E-10 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11650 ebdd1eda7f938b91d6166d986155b941 401 SUPERFAMILY SSF56645 47 248 1.11E-62 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS11650 ebdd1eda7f938b91d6166d986155b941 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 125 1.1E-15 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11650 ebdd1eda7f938b91d6166d986155b941 401 SUPERFAMILY SSF47203 235 392 1.11E-12 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11650 ebdd1eda7f938b91d6166d986155b941 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 223 3.3E-17 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS11650 ebdd1eda7f938b91d6166d986155b941 401 Gene3D G3DSA:2.40.110.10 128 223 6.2E-30 T 13-09-2016 PMA3_RS11650 ebdd1eda7f938b91d6166d986155b941 401 PANTHER PTHR10909:SF242 4 393 1.0E-111 T 13-09-2016 PMA3_RS11650 ebdd1eda7f938b91d6166d986155b941 401 Gene3D G3DSA:1.20.140.10 224 395 4.2E-20 T 13-09-2016 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 PANTHER PTHR11632:SF5 3 575 0.0 T 13-09-2016 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 462 590 1.6E-39 T 13-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 PIRSF PIRSF000171 1 580 1.0E-46 T 13-09-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 370 392 2.9E-6 T 13-09-2016 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.9E-6 T 13-09-2016 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 SUPERFAMILY SSF51905 5 262 1.9E-74 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 SUPERFAMILY SSF51905 361 428 1.9E-74 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 SUPERFAMILY SSF56425 240 358 2.39E-40 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 PANTHER PTHR11632 3 575 0.0 T 13-09-2016 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 Gene3D G3DSA:1.20.58.100 449 556 7.8E-40 T 13-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 Gene3D G3DSA:3.50.50.60 4 245 4.0E-118 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 Gene3D G3DSA:3.50.50.60 353 424 4.0E-118 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 Gene3D G3DSA:3.90.700.10 246 352 2.4E-39 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 10 590 2.5E-251 T 13-09-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 SUPERFAMILY SSF46977 454 590 1.09E-49 T 13-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 Gene3D G3DSA:4.10.80.40 557 590 3.0E-21 T 13-09-2016 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 8 590 1.5E-298 T 13-09-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 Pfam PF00890 FAD binding domain 10 407 1.8E-117 T 13-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PMA3_RS21270 2cd756cb6cdbc1ff45357cce65dc6e74 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 44 53 - T 13-09-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 PMA3_RS27715 7417ba32393a0f2688a64f895dd15006 303 Pfam PF12706 Beta-lactamase superfamily domain 50 270 6.3E-50 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS27715 7417ba32393a0f2688a64f895dd15006 303 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 3 303 2.8E-135 T 13-09-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 PMA3_RS27715 7417ba32393a0f2688a64f895dd15006 303 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 303 175.748 T 13-09-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 PMA3_RS27715 7417ba32393a0f2688a64f895dd15006 303 Gene3D G3DSA:3.60.15.10 1 303 7.9E-126 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS27715 7417ba32393a0f2688a64f895dd15006 303 SUPERFAMILY SSF56281 1 303 3.8E-69 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 Gene3D G3DSA:3.40.190.10 176 262 2.2E-20 T 13-09-2016 PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 PANTHER PTHR30419:SF3 1 288 1.1E-92 T 13-09-2016 PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 SUPERFAMILY SSF46785 1 111 6.28E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 PANTHER PTHR30419 1 288 1.1E-92 T 13-09-2016 PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 Pfam PF03466 LysR substrate binding domain 89 291 2.3E-46 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 Gene3D G3DSA:1.10.10.10 1 84 1.9E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 Gene3D G3DSA:3.40.190.10 89 175 7.5E-20 T 13-09-2016 PMA3_RS17405 fa521dc81f80cdae35bc8eb048c70cf8 300 SUPERFAMILY SSF53850 90 291 6.4E-44 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SUPERFAMILY SSF52172 741 862 9.82E-16 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Pfam PF00512 His Kinase A (phospho-acceptor) domain 501 566 1.3E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Pfam PF00072 Response regulator receiver domain 745 856 2.4E-9 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SUPERFAMILY SSF55785 314 440 1.73E-21 T 13-09-2016 IPR000014 PAS domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Pfam PF08448 PAS fold 336 444 1.7E-25 T 13-09-2016 IPR013656 PAS fold-4 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 PANTHER PTHR24423 28 440 1.3E-255 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 PANTHER PTHR24423 480 863 1.3E-255 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Gene3D G3DSA:3.30.565.10 569 723 1.7E-35 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 720 6.9E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SUPERFAMILY SSF55874 557 719 7.99E-37 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 PANTHER PTHR24423:SF479 28 440 1.3E-255 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 PANTHER PTHR24423:SF479 480 863 1.3E-255 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SMART SM00448 743 857 5.5E-7 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Gene3D G3DSA:3.40.50.2300 739 863 1.0E-14 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 705 718 2.4E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 699 2.4E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 674 2.4E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 660 2.4E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Gene3D G3DSA:1.10.287.130 495 562 1.1E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 326 449 2.5E-11 T 13-09-2016 IPR000014 PAS domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SUPERFAMILY SSF55785 86 195 1.05E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SUPERFAMILY SSF47384 487 566 1.26E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Gene3D G3DSA:3.30.450.20 86 196 4.8E-8 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Gene3D G3DSA:3.30.450.20 204 315 3.1E-12 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SUPERFAMILY SSF55785 200 315 2.09E-10 T 13-09-2016 IPR000014 PAS domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Pfam PF12860 PAS fold 220 320 8.3E-16 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Pfam PF12860 PAS fold 100 201 1.3E-13 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SMART SM00091 94 161 230.0 T 13-09-2016 IPR000014 PAS domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SMART SM00091 214 279 0.11 T 13-09-2016 IPR000014 PAS domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SMART SM00091 329 395 0.0057 T 13-09-2016 IPR000014 PAS domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 Gene3D G3DSA:3.30.450.20 316 440 1.2E-19 T 13-09-2016 PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SMART SM00387 610 721 3.3E-24 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15740 d984f047a19510b0f54116389d380c76 864 SMART SM00388 501 566 6.4E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS20165 2baf968792232758dae8dcc50549cbff 822 Gene3D G3DSA:2.170.130.10 138 268 3.8E-38 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS20165 2baf968792232758dae8dcc50549cbff 822 PANTHER PTHR32552 150 822 9.9E-204 T 13-09-2016 PMA3_RS20165 2baf968792232758dae8dcc50549cbff 822 SUPERFAMILY SSF56935 149 822 8.06E-125 T 13-09-2016 PMA3_RS20165 2baf968792232758dae8dcc50549cbff 822 SMART SM00965 66 116 8.8E-12 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS20165 2baf968792232758dae8dcc50549cbff 822 Pfam PF07660 Secretin and TonB N terminus short domain 66 114 7.0E-12 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS20165 2baf968792232758dae8dcc50549cbff 822 Pfam PF00593 TonB dependent receptor 579 820 8.6E-31 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS20165 2baf968792232758dae8dcc50549cbff 822 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 160 822 4.6E-104 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS20165 2baf968792232758dae8dcc50549cbff 822 Gene3D G3DSA:2.40.170.20 276 822 2.0E-124 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS20165 2baf968792232758dae8dcc50549cbff 822 Pfam PF07715 TonB-dependent Receptor Plug Domain 158 259 1.6E-19 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS20165 2baf968792232758dae8dcc50549cbff 822 PANTHER PTHR32552:SF37 150 822 9.9E-204 T 13-09-2016 PMA3_RS20775 e5a3212164547fb61207e116fcbcb484 255 SMART SM00880 11 252 1.4E-37 T 13-09-2016 IPR007899 CHAD domain PMA3_RS20775 e5a3212164547fb61207e116fcbcb484 255 Pfam PF05235 CHAD domain 19 216 4.4E-25 T 13-09-2016 IPR007899 CHAD domain PMA3_RS28655 1130728d84ffecc28cc0635265ac0b4b 406 PANTHER PTHR23502:SF19 1 396 7.8E-63 T 13-09-2016 PMA3_RS28655 1130728d84ffecc28cc0635265ac0b4b 406 SUPERFAMILY SSF103473 12 397 3.01E-53 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS28655 1130728d84ffecc28cc0635265ac0b4b 406 PANTHER PTHR23502 1 396 7.8E-63 T 13-09-2016 PMA3_RS28655 1130728d84ffecc28cc0635265ac0b4b 406 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS28655 1130728d84ffecc28cc0635265ac0b4b 406 Gene3D G3DSA:1.20.1250.20 14 193 9.2E-28 T 13-09-2016 PMA3_RS28655 1130728d84ffecc28cc0635265ac0b4b 406 Gene3D G3DSA:1.20.1250.20 213 400 1.2E-9 T 13-09-2016 PMA3_RS28655 1130728d84ffecc28cc0635265ac0b4b 406 Pfam PF07690 Major Facilitator Superfamily 18 357 4.3E-40 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS27710 51351fe5f3470739a67f8c1cd43113b4 809 Gene3D G3DSA:3.30.830.10 617 784 3.0E-29 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS27710 51351fe5f3470739a67f8c1cd43113b4 809 SUPERFAMILY SSF63411 622 792 2.2E-28 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS27710 51351fe5f3470739a67f8c1cd43113b4 809 Pfam PF00675 Insulinase (Peptidase family M16) 19 155 1.1E-34 T 13-09-2016 IPR011765 Peptidase M16, N-terminal PMA3_RS27710 51351fe5f3470739a67f8c1cd43113b4 809 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 40 63 - T 13-09-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 PMA3_RS27710 51351fe5f3470739a67f8c1cd43113b4 809 SUPERFAMILY SSF63411 4 214 5.13E-39 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS27710 51351fe5f3470739a67f8c1cd43113b4 809 Gene3D G3DSA:3.30.830.10 4 228 6.1E-43 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS27710 51351fe5f3470739a67f8c1cd43113b4 809 Pfam PF05193 Peptidase M16 inactive domain 180 315 1.2E-6 T 13-09-2016 IPR007863 Peptidase M16, C-terminal PMA3_RS27710 51351fe5f3470739a67f8c1cd43113b4 809 PANTHER PTHR11851:SF131 13 235 1.9E-43 T 13-09-2016 PMA3_RS27710 51351fe5f3470739a67f8c1cd43113b4 809 PANTHER PTHR11851 13 235 1.9E-43 T 13-09-2016 PMA3_RS27710 51351fe5f3470739a67f8c1cd43113b4 809 TIGRFAM TIGR02110 PQQ_syn_pqqF: coenzyme PQQ biosynthesis protein PqqF 11 710 1.0E-246 T 13-09-2016 IPR011844 Coenzyme PQQ biosynthesis protein PqqF GO:0004222|GO:0006508|GO:0008270|GO:0018189 UniPathway: UPA00539 PMA3_RS01370 547c92defd76d062f76b8a42ba09af32 110 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 92 3.0E-28 T 13-09-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 PMA3_RS01370 547c92defd76d062f76b8a42ba09af32 110 SUPERFAMILY SSF101386 4 98 9.38E-24 T 13-09-2016 PMA3_RS01370 547c92defd76d062f76b8a42ba09af32 110 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 6 95 4.6E-16 T 13-09-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 PMA3_RS01370 547c92defd76d062f76b8a42ba09af32 110 PANTHER PTHR21256 3 108 1.0E-44 T 13-09-2016 PMA3_RS01370 547c92defd76d062f76b8a42ba09af32 110 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 92 20.236 T 13-09-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 Gene3D G3DSA:1.10.40.30 391 446 4.3E-32 T 13-09-2016 PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 SUPERFAMILY SSF48557 10 455 2.2E-106 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 1.4E-50 T 13-09-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 13-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 PANTHER PTHR11444:SF17 4 456 2.5E-304 T 13-09-2016 PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 7.0E-19 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 7.0E-19 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 7.0E-19 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 7.0E-19 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 PANTHER PTHR11444 4 456 2.5E-304 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 Gene3D G3DSA:1.10.275.10 1 119 4.9E-47 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 Gene3D G3DSA:1.20.200.10 120 390 1.6E-88 T 13-09-2016 PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 Pfam PF00206 Lyase 14 313 6.4E-62 T 13-09-2016 IPR022761 Fumarate lyase, N-terminal PMA3_RS19640 f5c130bcb88e09270dba1ca9d2d9ddd9 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 454 1.7E-131 T 13-09-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PMA3_RS16440 20eaa588ae72c6355ae1dc5107df714c 379 SUPERFAMILY SSF56796 4 377 1.57E-108 T 13-09-2016 PMA3_RS16440 20eaa588ae72c6355ae1dc5107df714c 379 PANTHER PTHR11496:SF75 5 377 1.1E-90 T 13-09-2016 PMA3_RS16440 20eaa588ae72c6355ae1dc5107df714c 379 Gene3D G3DSA:1.20.1090.10 185 378 2.1E-51 T 13-09-2016 PMA3_RS16440 20eaa588ae72c6355ae1dc5107df714c 379 Gene3D G3DSA:3.40.50.1970 5 184 9.9E-52 T 13-09-2016 PMA3_RS16440 20eaa588ae72c6355ae1dc5107df714c 379 PANTHER PTHR11496 5 377 1.1E-90 T 13-09-2016 PMA3_RS16440 20eaa588ae72c6355ae1dc5107df714c 379 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 13-09-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PMA3_RS16440 20eaa588ae72c6355ae1dc5107df714c 379 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 370 1.5E-104 T 13-09-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 PANTHER PTHR30126:SF11 3 306 4.7E-106 T 13-09-2016 PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 Gene3D G3DSA:3.40.190.10 176 259 1.4E-24 T 13-09-2016 PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 Gene3D G3DSA:1.10.10.10 3 85 4.1E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 Gene3D G3DSA:3.40.190.10 91 175 1.3E-16 T 13-09-2016 PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 SUPERFAMILY SSF46785 1 105 3.81E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 SUPERFAMILY SSF53850 91 296 9.46E-50 T 13-09-2016 PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 Pfam PF03466 LysR substrate binding domain 91 291 1.2E-55 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 PANTHER PTHR30126 3 306 4.7E-106 T 13-09-2016 PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.0E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.0E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS05040 183625729bc49e531670efa0c87a1f39 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.0E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10715 09545838760360ad7aff51bd5c14a028 219 PANTHER PTHR12714 10 219 4.0E-26 T 13-09-2016 PMA3_RS10715 09545838760360ad7aff51bd5c14a028 219 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 109 196 1.2E-16 T 13-09-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 PMA3_RS11810 0fc129ae07181b6ae29ad38b6251977b 296 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 242 263 - T 13-09-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 PMA3_RS11810 0fc129ae07181b6ae29ad38b6251977b 296 SUPERFAMILY SSF54593 135 289 2.75E-35 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS11810 0fc129ae07181b6ae29ad38b6251977b 296 SUPERFAMILY SSF54593 1 123 7.96E-19 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS11810 0fc129ae07181b6ae29ad38b6251977b 296 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 143 264 2.2E-18 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS11810 0fc129ae07181b6ae29ad38b6251977b 296 Gene3D G3DSA:3.10.180.10 3 131 5.4E-27 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS11810 0fc129ae07181b6ae29ad38b6251977b 296 Gene3D G3DSA:3.10.180.10 134 292 4.6E-54 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS10755 bf65d61cbfba1622ee014295610d91cb 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 375 7.1E-124 T 13-09-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PMA3_RS10755 bf65d61cbfba1622ee014295610d91cb 388 PANTHER PTHR11496 1 388 5.9E-129 T 13-09-2016 PMA3_RS10755 bf65d61cbfba1622ee014295610d91cb 388 PANTHER PTHR11496:SF77 1 388 5.9E-129 T 13-09-2016 PMA3_RS10755 bf65d61cbfba1622ee014295610d91cb 388 Gene3D G3DSA:3.40.50.1970 1 184 1.3E-61 T 13-09-2016 PMA3_RS10755 bf65d61cbfba1622ee014295610d91cb 388 Gene3D G3DSA:1.20.1090.10 185 383 1.5E-65 T 13-09-2016 PMA3_RS10755 bf65d61cbfba1622ee014295610d91cb 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 13-09-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PMA3_RS10755 bf65d61cbfba1622ee014295610d91cb 388 SUPERFAMILY SSF56796 1 385 1.31E-126 T 13-09-2016 PMA3_RS26590 ea4c10c14eb95268013c8088487f05a4 631 PANTHER PTHR30627 5 631 1.2E-247 T 13-09-2016 PMA3_RS26590 ea4c10c14eb95268013c8088487f05a4 631 Gene3D G3DSA:3.90.1310.10 131 249 1.2E-38 T 13-09-2016 PMA3_RS26590 ea4c10c14eb95268013c8088487f05a4 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 236 3.2E-42 T 13-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PMA3_RS26590 ea4c10c14eb95268013c8088487f05a4 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 604 2.1E-76 T 13-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PMA3_RS26590 ea4c10c14eb95268013c8088487f05a4 631 Gene3D G3DSA:3.40.710.10 250 609 4.3E-111 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS26590 ea4c10c14eb95268013c8088487f05a4 631 SUPERFAMILY SSF56519 56 250 6.8E-51 T 13-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PMA3_RS26590 ea4c10c14eb95268013c8088487f05a4 631 PANTHER PTHR30627:SF2 5 631 1.2E-247 T 13-09-2016 PMA3_RS26590 ea4c10c14eb95268013c8088487f05a4 631 SUPERFAMILY SSF56601 251 607 2.36E-103 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS26590 ea4c10c14eb95268013c8088487f05a4 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 607 1.4E-235 T 13-09-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 PMA3_RS14220 749c741d46061282ee93bd8581e42917 312 Pfam PF03466 LysR substrate binding domain 105 307 8.0E-30 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS14220 749c741d46061282ee93bd8581e42917 312 SUPERFAMILY SSF46785 18 98 2.48E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14220 749c741d46061282ee93bd8581e42917 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 3.0E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14220 749c741d46061282ee93bd8581e42917 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 3.0E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14220 749c741d46061282ee93bd8581e42917 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 3.0E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14220 749c741d46061282ee93bd8581e42917 312 SUPERFAMILY SSF53850 105 307 1.99E-34 T 13-09-2016 PMA3_RS14220 749c741d46061282ee93bd8581e42917 312 Gene3D G3DSA:3.40.190.10 108 205 7.4E-22 T 13-09-2016 PMA3_RS14220 749c741d46061282ee93bd8581e42917 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 79 5.2E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14220 749c741d46061282ee93bd8581e42917 312 Gene3D G3DSA:1.10.10.10 19 99 4.1E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14220 749c741d46061282ee93bd8581e42917 312 PANTHER PTHR30537 13 307 1.1E-75 T 13-09-2016 PMA3_RS18225 70f374454bbc92d304e310832682c9ab 708 Gene3D G3DSA:2.170.130.10 21 166 2.8E-16 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS18225 70f374454bbc92d304e310832682c9ab 708 Pfam PF00593 TonB dependent receptor 443 705 1.1E-22 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS18225 70f374454bbc92d304e310832682c9ab 708 PANTHER PTHR32552 9 707 9.2E-27 T 13-09-2016 PMA3_RS18225 70f374454bbc92d304e310832682c9ab 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 163 7.3E-9 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS18225 70f374454bbc92d304e310832682c9ab 708 Gene3D G3DSA:2.40.170.20 167 706 3.3E-70 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS18225 70f374454bbc92d304e310832682c9ab 708 SUPERFAMILY SSF56935 53 706 1.14E-86 T 13-09-2016 PMA3_RS09810 5fee12252acebd7588126ee1d88d4815 477 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 27 412 3.2E-113 T 13-09-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 PMA3_RS09810 5fee12252acebd7588126ee1d88d4815 477 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 23 436 5.2E-108 T 13-09-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 PMA3_RS09810 5fee12252acebd7588126ee1d88d4815 477 PANTHER PTHR30108:SF1 4 443 3.6E-122 T 13-09-2016 PMA3_RS09810 5fee12252acebd7588126ee1d88d4815 477 SUPERFAMILY SSF143968 310 448 4.71E-39 T 13-09-2016 PMA3_RS09810 5fee12252acebd7588126ee1d88d4815 477 Gene3D G3DSA:3.40.1670.10 324 435 3.8E-34 T 13-09-2016 PMA3_RS09810 5fee12252acebd7588126ee1d88d4815 477 PANTHER PTHR30108 4 443 3.6E-122 T 13-09-2016 PMA3_RS09810 5fee12252acebd7588126ee1d88d4815 477 SUPERFAMILY SSF50475 22 307 4.32E-85 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS16805 d7df7057f7d831f061d4686846a7c45b 232 PANTHER PTHR30212 25 213 4.6E-54 T 13-09-2016 PMA3_RS16805 d7df7057f7d831f061d4686846a7c45b 232 PANTHER PTHR30212:SF2 25 213 4.6E-54 T 13-09-2016 PMA3_RS16805 d7df7057f7d831f061d4686846a7c45b 232 Pfam PF03473 MOSC domain 50 165 1.0E-22 T 13-09-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PMA3_RS16805 d7df7057f7d831f061d4686846a7c45b 232 Gene3D G3DSA:2.40.33.20 4 216 1.3E-68 T 13-09-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like PMA3_RS16805 d7df7057f7d831f061d4686846a7c45b 232 SUPERFAMILY SSF50800 10 216 1.71E-59 T 13-09-2016 IPR011037 Pyruvate kinase-like, insert domain PMA3_RS14820 af2efcdf3040cea443dfef66ee128637 392 SUPERFAMILY SSF103473 8 387 3.53E-51 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS14820 af2efcdf3040cea443dfef66ee128637 392 PANTHER PTHR23517 4 392 9.7E-45 T 13-09-2016 PMA3_RS14820 af2efcdf3040cea443dfef66ee128637 392 Gene3D G3DSA:1.20.1250.20 206 382 1.8E-15 T 13-09-2016 PMA3_RS14820 af2efcdf3040cea443dfef66ee128637 392 Gene3D G3DSA:1.20.1250.20 11 184 1.0E-24 T 13-09-2016 PMA3_RS14820 af2efcdf3040cea443dfef66ee128637 392 Pfam PF07690 Major Facilitator Superfamily 12 350 2.4E-35 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS02945 f06d71923fe57f156202c5192bac5563 444 PANTHER PTHR11662 30 439 5.8E-150 T 13-09-2016 PMA3_RS02945 f06d71923fe57f156202c5192bac5563 444 PANTHER PTHR11662:SF277 30 439 5.8E-150 T 13-09-2016 PMA3_RS02945 f06d71923fe57f156202c5192bac5563 444 Pfam PF07690 Major Facilitator Superfamily 40 397 6.4E-53 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS02945 f06d71923fe57f156202c5192bac5563 444 Gene3D G3DSA:1.20.1250.20 237 436 3.4E-17 T 13-09-2016 PMA3_RS02945 f06d71923fe57f156202c5192bac5563 444 Gene3D G3DSA:1.20.1250.20 33 219 1.7E-41 T 13-09-2016 PMA3_RS02945 f06d71923fe57f156202c5192bac5563 444 SUPERFAMILY SSF103473 28 438 4.97E-74 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS12910 e839b1e57b1444dfaff15d16e1b9dafb 219 Gene3D G3DSA:3.40.1050.10 1 202 3.0E-69 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS12910 e839b1e57b1444dfaff15d16e1b9dafb 219 Pfam PF00484 Carbonic anhydrase 34 188 2.0E-49 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS12910 e839b1e57b1444dfaff15d16e1b9dafb 219 SMART SM00947 27 193 7.3E-67 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS12910 e839b1e57b1444dfaff15d16e1b9dafb 219 PANTHER PTHR11002:SF13 1 208 5.1E-78 T 13-09-2016 PMA3_RS12910 e839b1e57b1444dfaff15d16e1b9dafb 219 SUPERFAMILY SSF53056 2 202 2.88E-65 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS12910 e839b1e57b1444dfaff15d16e1b9dafb 219 PANTHER PTHR11002 1 208 5.1E-78 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS12910 e839b1e57b1444dfaff15d16e1b9dafb 219 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 13-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS12910 e839b1e57b1444dfaff15d16e1b9dafb 219 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 13-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS16655 c295fcca8fddf6154847330dc292eabe 499 Gene3D G3DSA:3.30.43.10 18 110 6.4E-27 T 13-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PMA3_RS16655 c295fcca8fddf6154847330dc292eabe 499 PANTHER PTHR11748 1 487 9.7E-212 T 13-09-2016 PMA3_RS16655 c295fcca8fddf6154847330dc292eabe 499 SUPERFAMILY SSF55103 204 474 9.81E-80 T 13-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PMA3_RS16655 c295fcca8fddf6154847330dc292eabe 499 Gene3D G3DSA:1.10.45.10 432 471 3.1E-10 T 13-09-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PMA3_RS16655 c295fcca8fddf6154847330dc292eabe 499 PANTHER PTHR11748:SF78 1 487 9.7E-212 T 13-09-2016 PMA3_RS16655 c295fcca8fddf6154847330dc292eabe 499 Pfam PF01565 FAD binding domain 57 194 1.8E-37 T 13-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PMA3_RS16655 c295fcca8fddf6154847330dc292eabe 499 Gene3D G3DSA:3.30.465.10 111 231 2.2E-32 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS16655 c295fcca8fddf6154847330dc292eabe 499 SUPERFAMILY SSF56176 19 231 4.49E-67 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS16655 c295fcca8fddf6154847330dc292eabe 499 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 59 470 8.6E-177 T 13-09-2016 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 PMA3_RS16655 c295fcca8fddf6154847330dc292eabe 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 230 470 1.5E-70 T 13-09-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PMA3_RS18935 eca2e17c40844184b95e33a806da2f02 521 SUPERFAMILY SSF58104 242 521 4.27E-72 T 13-09-2016 PMA3_RS18935 eca2e17c40844184b95e33a806da2f02 521 Pfam PF08447 PAS fold 31 107 1.7E-10 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS18935 eca2e17c40844184b95e33a806da2f02 521 SUPERFAMILY SSF55785 21 113 1.29E-21 T 13-09-2016 IPR000014 PAS domain PMA3_RS18935 eca2e17c40844184b95e33a806da2f02 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 519 3.9E-50 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS18935 eca2e17c40844184b95e33a806da2f02 521 SMART SM00283 259 520 2.8E-73 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS18935 eca2e17c40844184b95e33a806da2f02 521 PANTHER PTHR32089 51 521 8.3E-140 T 13-09-2016 PMA3_RS18935 eca2e17c40844184b95e33a806da2f02 521 Gene3D G3DSA:1.10.287.950 274 491 4.9E-58 T 13-09-2016 PMA3_RS18935 eca2e17c40844184b95e33a806da2f02 521 Gene3D G3DSA:3.30.450.20 20 112 3.1E-19 T 13-09-2016 PMA3_RS18935 eca2e17c40844184b95e33a806da2f02 521 PANTHER PTHR32089:SF64 51 521 8.3E-140 T 13-09-2016 PMA3_RS18935 eca2e17c40844184b95e33a806da2f02 521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 109 4.0E-10 T 13-09-2016 IPR000014 PAS domain PMA3_RS16660 cd9a35e6c3c3cbf16830dbe188732b23 354 SUPERFAMILY SSF55103 137 350 1.57E-17 T 13-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PMA3_RS16660 cd9a35e6c3c3cbf16830dbe188732b23 354 Gene3D G3DSA:3.30.465.10 55 176 1.8E-25 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS16660 cd9a35e6c3c3cbf16830dbe188732b23 354 Gene3D G3DSA:1.10.45.10 327 350 2.5E-7 T 13-09-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PMA3_RS16660 cd9a35e6c3c3cbf16830dbe188732b23 354 PANTHER PTHR11748 13 350 3.9E-99 T 13-09-2016 PMA3_RS16660 cd9a35e6c3c3cbf16830dbe188732b23 354 PANTHER PTHR11748:SF1 13 350 3.9E-99 T 13-09-2016 PMA3_RS16660 cd9a35e6c3c3cbf16830dbe188732b23 354 Pfam PF01565 FAD binding domain 16 138 9.0E-22 T 13-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PMA3_RS16660 cd9a35e6c3c3cbf16830dbe188732b23 354 SUPERFAMILY SSF56176 15 176 1.96E-34 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS06045 8b7fbd58962fd68fe673b4f1768fd043 244 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 71 84 - T 13-09-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS06045 8b7fbd58962fd68fe673b4f1768fd043 244 Gene3D G3DSA:3.20.20.70 17 243 5.9E-86 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS06045 8b7fbd58962fd68fe673b4f1768fd043 244 SMART SM00934 19 239 3.3E-98 T 13-09-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS06045 8b7fbd58962fd68fe673b4f1768fd043 244 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 21 238 1.3E-56 T 13-09-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS06045 8b7fbd58962fd68fe673b4f1768fd043 244 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 19 238 1.5E-51 T 13-09-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS06045 8b7fbd58962fd68fe673b4f1768fd043 244 PANTHER PTHR32119 5 243 7.6E-109 T 13-09-2016 PMA3_RS06045 8b7fbd58962fd68fe673b4f1768fd043 244 PANTHER PTHR32119:SF2 5 243 7.6E-109 T 13-09-2016 PMA3_RS06045 8b7fbd58962fd68fe673b4f1768fd043 244 SUPERFAMILY SSF51366 17 242 6.19E-72 T 13-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PMA3_RS06045 8b7fbd58962fd68fe673b4f1768fd043 244 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 17 244 38.783 T 13-09-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 316 642 1.0E-150 T 13-09-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 PANTHER PTHR34216:SF2 460 644 6.9E-229 T 13-09-2016 PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 Gene3D G3DSA:3.20.20.370 421 473 1.3E-26 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 Gene3D G3DSA:3.20.20.370 73 268 1.3E-26 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 48 663 8.8E-268 T 13-09-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 PANTHER PTHR34216 460 644 6.9E-229 T 13-09-2016 PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 PANTHER PTHR34216 9 306 6.9E-229 T 13-09-2016 PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 Gene3D G3DSA:3.20.20.80 474 643 3.4E-4 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 Pfam PF01522 Polysaccharide deacetylase 101 268 8.1E-29 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 SUPERFAMILY SSF88713 222 287 6.18E-35 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 SUPERFAMILY SSF88713 64 194 6.18E-35 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS00470 9c31519898b5e9a9247299ddce41a9df 666 PANTHER PTHR34216:SF2 9 306 6.9E-229 T 13-09-2016 PMA3_RS06920 a41cf3e12ae2bb85237c740986789632 313 SMART SM00450 114 215 4.1E-17 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS06920 a41cf3e12ae2bb85237c740986789632 313 PANTHER PTHR22778:SF12 3 291 1.1E-107 T 13-09-2016 PMA3_RS06920 a41cf3e12ae2bb85237c740986789632 313 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 255 46.03 T 13-09-2016 IPR020936 Uncharacterised protein family UPF0176 PMA3_RS06920 a41cf3e12ae2bb85237c740986789632 313 Pfam PF00581 Rhodanese-like domain 121 211 7.2E-6 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS06920 a41cf3e12ae2bb85237c740986789632 313 PANTHER PTHR22778 3 291 1.1E-107 T 13-09-2016 PMA3_RS06920 a41cf3e12ae2bb85237c740986789632 313 Gene3D G3DSA:3.40.250.10 104 227 3.5E-39 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS06920 a41cf3e12ae2bb85237c740986789632 313 SUPERFAMILY SSF52821 91 226 1.26E-29 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS08760 23acc75be1e33de2f714c08ecd7d10a4 308 Pfam PF00923 Transaldolase 14 303 4.6E-98 T 13-09-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PMA3_RS08760 23acc75be1e33de2f714c08ecd7d10a4 308 PANTHER PTHR10683:SF18 1 308 4.8E-170 T 13-09-2016 PMA3_RS08760 23acc75be1e33de2f714c08ecd7d10a4 308 Hamap MF_00492 Transaldolase [tal]. 2 308 49.989 T 13-09-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PMA3_RS08760 23acc75be1e33de2f714c08ecd7d10a4 308 ProSitePatterns PS00958 Transaldolase active site. 122 139 - T 13-09-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PMA3_RS08760 23acc75be1e33de2f714c08ecd7d10a4 308 SUPERFAMILY SSF51569 1 307 3.14E-111 T 13-09-2016 PMA3_RS08760 23acc75be1e33de2f714c08ecd7d10a4 308 Gene3D G3DSA:3.20.20.70 2 307 3.7E-122 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS08760 23acc75be1e33de2f714c08ecd7d10a4 308 PANTHER PTHR10683 1 308 4.8E-170 T 13-09-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PMA3_RS08760 23acc75be1e33de2f714c08ecd7d10a4 308 TIGRFAM TIGR00874 talAB: transaldolase 4 308 7.3E-138 T 13-09-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PMA3_RS08760 23acc75be1e33de2f714c08ecd7d10a4 308 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 13-09-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 2.8E-13 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 SUPERFAMILY SSF54211 236 491 1.52E-96 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 PANTHER PTHR11528 2 631 0.0 T 13-09-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 SUPERFAMILY SSF110942 518 630 3.4E-35 T 13-09-2016 PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 PIRSF PIRSF002583 1 633 4.3E-216 T 13-09-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 SUPERFAMILY SSF55874 8 216 4.58E-65 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 13-09-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 SMART SM00387 30 187 1.3E-8 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 PRINTS PR00775 90kDa heat shock protein signature 8 28 5.5E-61 T 13-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 PRINTS PR00775 90kDa heat shock protein signature 78 95 5.5E-61 T 13-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 PRINTS PR00775 90kDa heat shock protein signature 193 211 5.5E-61 T 13-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 PRINTS PR00775 90kDa heat shock protein signature 123 145 5.5E-61 T 13-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 PRINTS PR00775 90kDa heat shock protein signature 29 51 5.5E-61 T 13-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 PRINTS PR00775 90kDa heat shock protein signature 175 192 5.5E-61 T 13-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 PRINTS PR00775 90kDa heat shock protein signature 96 113 5.5E-61 T 13-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 Gene3D G3DSA:3.30.565.10 8 243 8.1E-84 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 Pfam PF00183 Hsp90 protein 223 629 9.3E-131 T 13-09-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 630 32.594 T 13-09-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PMA3_RS21205 c696d8a817ae204ca36d927f39eaf515 634 PANTHER PTHR11528:SF44 2 631 0.0 T 13-09-2016 PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 PRINTS PR00070 Dihydrofolate reductase signature 32 40 5.9E-15 T 13-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 PRINTS PR00070 Dihydrofolate reductase signature 102 116 5.9E-15 T 13-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 PRINTS PR00070 Dihydrofolate reductase signature 18 28 5.9E-15 T 13-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 PRINTS PR00070 Dihydrofolate reductase signature 45 56 5.9E-15 T 13-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 SUPERFAMILY SSF53597 6 169 1.83E-56 T 13-09-2016 IPR024072 Dihydrofolate reductase-like domain PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 PANTHER PTHR22778 1 170 6.8E-46 T 13-09-2016 PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 Gene3D G3DSA:3.40.430.10 3 169 1.0E-57 T 13-09-2016 IPR024072 Dihydrofolate reductase-like domain PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 18 40 - T 13-09-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 Pfam PF00186 Dihydrofolate reductase 7 169 1.5E-54 T 13-09-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 PIRSF PIRSF000194 1 170 3.1E-59 T 13-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PMA3_RS28685 a669472c79710e1ccf2451187a0f84e0 170 PANTHER PTHR22778:SF16 1 170 6.8E-46 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 108 595 5.2E-58 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 326 340 3.8E-16 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.8E-16 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 552 3.8E-16 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 184 198 3.8E-16 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 SUPERFAMILY SSF81653 140 234 3.27E-24 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 84 622 9.1E-157 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 Gene3D G3DSA:2.70.150.10 88 235 3.7E-25 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 Pfam PF00702 haloacid dehalogenase-like hydrolase 325 528 5.7E-23 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 PANTHER PTHR24093 10 589 2.9E-119 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 SUPERFAMILY SSF56784 380 619 7.61E-39 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 SUPERFAMILY SSF56784 325 344 7.61E-39 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 Gene3D G3DSA:3.40.50.1000 432 587 3.2E-31 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 PANTHER PTHR24093:SF126 10 589 2.9E-119 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 Pfam PF00122 E1-E2 ATPase 105 317 2.7E-59 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 84 624 1.0E-146 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 328 334 - T 13-09-2016 IPR018303 P-type ATPase, phosphorylation site PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 SUPERFAMILY SSF81665 235 320 9.42E-13 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 SUPERFAMILY SSF81665 566 594 9.42E-13 T 13-09-2016 PMA3_RS29930 4a89f025d4b78101c71e6529c5efe77b 636 SUPERFAMILY SSF81665 83 137 9.42E-13 T 13-09-2016 PMA3_RS15135 044d777065be8bf5b1ed59b4841f0a6a 146 SUPERFAMILY SSF69118 4 145 1.13E-45 T 13-09-2016 IPR029032 AhpD-like PMA3_RS15135 044d777065be8bf5b1ed59b4841f0a6a 146 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 94 2.1E-15 T 13-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS15135 044d777065be8bf5b1ed59b4841f0a6a 146 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 32 77 7.2E-14 T 13-09-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS15135 044d777065be8bf5b1ed59b4841f0a6a 146 Gene3D G3DSA:1.20.1290.10 1 145 6.6E-52 T 13-09-2016 IPR029032 AhpD-like PMA3_RS21085 227fe636e616954292a8854a7327ca04 244 PANTHER PTHR34148:SF1 4 243 1.4E-51 T 13-09-2016 PMA3_RS21085 227fe636e616954292a8854a7327ca04 244 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 244 50.542 T 13-09-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 PMA3_RS21085 227fe636e616954292a8854a7327ca04 244 PANTHER PTHR34148 4 243 1.4E-51 T 13-09-2016 PMA3_RS21085 227fe636e616954292a8854a7327ca04 244 Pfam PF02654 Cobalamin-5-phosphate synthase 7 237 7.3E-53 T 13-09-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 PMA3_RS21085 227fe636e616954292a8854a7327ca04 244 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 4 240 1.1E-34 T 13-09-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 PMA3_RS16790 3fbca7535f904dc64cb9a70d04c2f082 224 SUPERFAMILY SSF53597 2 208 1.83E-48 T 13-09-2016 IPR024072 Dihydrofolate reductase-like domain PMA3_RS16790 3fbca7535f904dc64cb9a70d04c2f082 224 Pfam PF01872 RibD C-terminal domain 2 199 1.7E-43 T 13-09-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PMA3_RS16790 3fbca7535f904dc64cb9a70d04c2f082 224 Gene3D G3DSA:3.40.430.10 2 219 1.2E-52 T 13-09-2016 IPR024072 Dihydrofolate reductase-like domain PMA3_RS16420 71a865e7d3ffcd8f908c7fb2f925b07c 146 SUPERFAMILY SSF54631 15 144 1.89E-32 T 13-09-2016 PMA3_RS16420 71a865e7d3ffcd8f908c7fb2f925b07c 146 Gene3D G3DSA:3.10.580.10 11 127 4.9E-32 T 13-09-2016 PMA3_RS16420 71a865e7d3ffcd8f908c7fb2f925b07c 146 SMART SM00116 82 129 1.9E-6 T 13-09-2016 IPR000644 CBS domain PMA3_RS16420 71a865e7d3ffcd8f908c7fb2f925b07c 146 SMART SM00116 17 64 5.6E-6 T 13-09-2016 IPR000644 CBS domain PMA3_RS16420 71a865e7d3ffcd8f908c7fb2f925b07c 146 PANTHER PTHR11911 7 145 1.1E-34 T 13-09-2016 PMA3_RS16420 71a865e7d3ffcd8f908c7fb2f925b07c 146 Pfam PF00571 CBS domain 14 63 9.8E-12 T 13-09-2016 IPR000644 CBS domain PMA3_RS16420 71a865e7d3ffcd8f908c7fb2f925b07c 146 Pfam PF00571 CBS domain 75 126 5.5E-11 T 13-09-2016 IPR000644 CBS domain PMA3_RS27945 836225b73a0d038af999c0423fccc2eb 210 Pfam PF04268 Sarcosine oxidase, gamma subunit family 53 203 6.9E-49 T 13-09-2016 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PMA3_RS27945 836225b73a0d038af999c0423fccc2eb 210 SUPERFAMILY SSF103025 81 206 5.69E-21 T 13-09-2016 PMA3_RS27945 836225b73a0d038af999c0423fccc2eb 210 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 53 203 1.4E-50 T 13-09-2016 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PMA3_RS27945 836225b73a0d038af999c0423fccc2eb 210 Gene3D G3DSA:3.30.1360.120 121 206 2.0E-4 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 PIRSF PIRSF002888 3 322 3.8E-90 T 13-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 8.7E-21 T 13-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 8.7E-21 T 13-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 8.7E-21 T 13-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 8.7E-21 T 13-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 Pfam PF02154 Flagellar motor switch protein FliM 38 229 2.0E-73 T 13-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 319 3.7E-107 T 13-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 PANTHER PTHR30034:SF0 4 321 4.8E-147 T 13-09-2016 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 Gene3D G3DSA:2.30.330.10 241 319 2.4E-8 T 13-09-2016 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 319 8.6E-18 T 13-09-2016 IPR001543 Surface presentation of antigen (SpoA) PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 SUPERFAMILY SSF101801 247 319 1.44E-13 T 13-09-2016 IPR001543 Surface presentation of antigen (SpoA) PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 PANTHER PTHR30034 4 321 4.8E-147 T 13-09-2016 PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 SUPERFAMILY SSF103039 55 230 1.8E-17 T 13-09-2016 IPR028976 CheC-like domain PMA3_RS21680 80c89beadb6a8addf9e8e9b523838e3d 322 SUPERFAMILY SSF103039 6 15 1.8E-17 T 13-09-2016 IPR028976 CheC-like domain PMA3_RS20100 c36edf315622da2682cf597655748602 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 7.4E-19 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS20100 c36edf315622da2682cf597655748602 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS20100 c36edf315622da2682cf597655748602 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.4E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS20100 c36edf315622da2682cf597655748602 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.4E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS20100 c36edf315622da2682cf597655748602 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.4E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS20100 c36edf315622da2682cf597655748602 211 SUPERFAMILY SSF46894 141 211 2.38E-18 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS20100 c36edf315622da2682cf597655748602 211 SMART SM00421 148 205 2.0E-16 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS20100 c36edf315622da2682cf597655748602 211 PANTHER PTHR26402:SF151 5 209 7.4E-52 T 13-09-2016 PMA3_RS20100 c36edf315622da2682cf597655748602 211 SMART SM00448 5 117 8.4E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS20100 c36edf315622da2682cf597655748602 211 Gene3D G3DSA:1.10.10.10 122 211 1.4E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20100 c36edf315622da2682cf597655748602 211 Gene3D G3DSA:3.40.50.2300 7 121 1.5E-30 T 13-09-2016 PMA3_RS20100 c36edf315622da2682cf597655748602 211 PANTHER PTHR26402 5 209 7.4E-52 T 13-09-2016 PMA3_RS20100 c36edf315622da2682cf597655748602 211 Pfam PF00072 Response regulator receiver domain 8 118 1.4E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS20100 c36edf315622da2682cf597655748602 211 SUPERFAMILY SSF52172 6 133 8.11E-31 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS02870 9aca5b9b031e704962a4640f35034b79 203 SMART SM00479 3 170 1.3E-32 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS02870 9aca5b9b031e704962a4640f35034b79 203 Gene3D G3DSA:3.30.420.10 3 171 1.7E-46 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS02870 9aca5b9b031e704962a4640f35034b79 203 SUPERFAMILY SSF53098 3 170 3.33E-43 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS02870 9aca5b9b031e704962a4640f35034b79 203 Pfam PF00929 Exonuclease 6 160 7.0E-27 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS02870 9aca5b9b031e704962a4640f35034b79 203 PANTHER PTHR30231 2 169 1.1E-37 T 13-09-2016 PMA3_RS02870 9aca5b9b031e704962a4640f35034b79 203 PANTHER PTHR30231:SF4 2 169 1.1E-37 T 13-09-2016 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Gene3D G3DSA:1.10.860.10 502 642 1.3E-42 T 13-09-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 SUPERFAMILY SSF117023 516 643 2.22E-34 T 13-09-2016 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 TIGRFAM TIGR01391 dnaG: DNA primase 5 420 8.6E-147 T 13-09-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Gene3D G3DSA:3.90.980.10 116 242 4.7E-47 T 13-09-2016 IPR013264 DNA primase, catalytic core, N-terminal PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Gene3D G3DSA:1.20.50.20 371 428 1.5E-22 T 13-09-2016 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 SUPERFAMILY SSF56731 116 427 6.8E-110 T 13-09-2016 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Gene3D G3DSA:3.40.1360.10 243 367 3.4E-47 T 13-09-2016 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 254 3.1E-44 T 13-09-2016 IPR013264 DNA primase, catalytic core, N-terminal PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Pfam PF10410 DnaB-helicase binding domain of primase 373 425 1.8E-8 T 13-09-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Pfam PF13662 Toprim domain 261 329 2.2E-16 T 13-09-2016 IPR006171 Toprim domain PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 SMART SM00766 516 641 8.0E-37 T 13-09-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 SMART SM00493 261 332 1.2E-20 T 13-09-2016 IPR006171 Toprim domain PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 SUPERFAMILY SSF57783 4 101 8.5E-38 T 13-09-2016 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Pfam PF01807 CHC2 zinc finger 6 101 1.1E-40 T 13-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 SMART SM00400 36 90 1.6E-34 T 13-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 PIRSF PIRSF002811 2 649 7.9E-152 T 13-09-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Gene3D G3DSA:3.90.580.10 2 101 9.3E-42 T 13-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 PANTHER PTHR30313 3 441 9.4E-163 T 13-09-2016 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Pfam PF08278 DNA primase DnaG DnaB-binding 520 640 1.3E-28 T 13-09-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PMA3_RS27630 744068928b5f4dfad44053d78e6aba13 655 Hamap MF_00974 DNA primase [dnaG]. 4 642 30.282 T 13-09-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PMA3_RS12175 3c1c97098e82d782271a3adec2857f09 381 Gene3D G3DSA:3.30.530.20 224 331 3.7E-8 T 13-09-2016 IPR023393 START-like domain PMA3_RS12175 3c1c97098e82d782271a3adec2857f09 381 SUPERFAMILY SSF55961 224 370 4.98E-21 T 13-09-2016 PMA3_RS12175 3c1c97098e82d782271a3adec2857f09 381 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 228 368 4.6E-23 T 13-09-2016 IPR019587 Polyketide cyclase/dehydrase PMA3_RS12175 3c1c97098e82d782271a3adec2857f09 381 Pfam PF04116 Fatty acid hydroxylase superfamily 56 211 9.4E-14 T 13-09-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PMA3_RS04180 e483a8368f87c69e8fc73bb0f09f1243 498 Pfam PF02743 Cache domain 85 281 7.3E-24 T 13-09-2016 IPR033479 Double Cache domain 1 PMA3_RS04180 e483a8368f87c69e8fc73bb0f09f1243 498 PANTHER PTHR10799 1 494 2.6E-30 T 13-09-2016 PMA3_RS04180 e483a8368f87c69e8fc73bb0f09f1243 498 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 493 3.4E-48 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS04180 e483a8368f87c69e8fc73bb0f09f1243 498 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 331 495 5.1E-51 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS04180 e483a8368f87c69e8fc73bb0f09f1243 498 PANTHER PTHR10799:SF750 1 494 2.6E-30 T 13-09-2016 PMA3_RS04180 e483a8368f87c69e8fc73bb0f09f1243 498 SUPERFAMILY SSF55073 340 495 3.53E-48 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS04180 e483a8368f87c69e8fc73bb0f09f1243 498 SMART SM00267 324 497 1.2E-68 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS04180 e483a8368f87c69e8fc73bb0f09f1243 498 Gene3D G3DSA:3.30.70.270 337 495 8.8E-54 T 13-09-2016 PMA3_RS04180 e483a8368f87c69e8fc73bb0f09f1243 498 Gene3D G3DSA:3.30.450.20 157 293 2.4E-13 T 13-09-2016 PMA3_RS08720 e69afce34c07067edf811da8efb550bb 226 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 7.8E-102 T 13-09-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PMA3_RS08720 e69afce34c07067edf811da8efb550bb 226 PANTHER PTHR26402 1 222 4.9E-104 T 13-09-2016 PMA3_RS08720 e69afce34c07067edf811da8efb550bb 226 Pfam PF00072 Response regulator receiver domain 4 113 4.1E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS08720 e69afce34c07067edf811da8efb550bb 226 Gene3D G3DSA:1.10.10.10 123 223 1.2E-31 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08720 e69afce34c07067edf811da8efb550bb 226 SUPERFAMILY SSF52172 1 176 9.64E-37 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS08720 e69afce34c07067edf811da8efb550bb 226 SMART SM00862 146 221 9.6E-25 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS08720 e69afce34c07067edf811da8efb550bb 226 PANTHER PTHR26402:SF575 1 222 4.9E-104 T 13-09-2016 PMA3_RS08720 e69afce34c07067edf811da8efb550bb 226 SMART SM00448 1 112 4.2E-37 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS08720 e69afce34c07067edf811da8efb550bb 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.1E-24 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS08720 e69afce34c07067edf811da8efb550bb 226 Gene3D G3DSA:3.40.50.2300 1 122 2.3E-36 T 13-09-2016 PMA3_RS00185 5e7217bcb1b6fcd60b84748820b5963a 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 4 139 4.1E-61 T 13-09-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 PMA3_RS00185 5e7217bcb1b6fcd60b84748820b5963a 143 Pfam PF02566 OsmC-like protein 42 137 3.9E-21 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS00185 5e7217bcb1b6fcd60b84748820b5963a 143 PANTHER PTHR33797 1 143 6.7E-57 T 13-09-2016 PMA3_RS00185 5e7217bcb1b6fcd60b84748820b5963a 143 Gene3D G3DSA:3.30.300.20 3 141 2.2E-51 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS00185 5e7217bcb1b6fcd60b84748820b5963a 143 PANTHER PTHR33797:SF1 1 143 6.7E-57 T 13-09-2016 PMA3_RS00185 5e7217bcb1b6fcd60b84748820b5963a 143 SUPERFAMILY SSF82784 1 141 3.01E-40 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 SMART SM00878 340 447 1.9E-56 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 PANTHER PTHR18866:SF102 4 650 0.0 T 13-09-2016 PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 SUPERFAMILY SSF52440 5 117 4.82E-43 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 SUPERFAMILY SSF51246 336 453 6.8E-40 T 13-09-2016 IPR011054 Rudiment single hybrid motif PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 326 5.0E-78 T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 SUPERFAMILY SSF51230 571 649 4.06E-21 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 Gene3D G3DSA:3.30.1490.20 133 206 1.4E-29 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 Pfam PF00364 Biotin-requiring enzyme 584 648 2.8E-17 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 Gene3D G3DSA:2.40.50.100 580 649 4.1E-25 T 13-09-2016 PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 114 1.2E-40 T 13-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 Gene3D G3DSA:3.30.470.20 209 451 3.2E-101 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 Pfam PF02785 Biotin carboxylase C-terminal domain 340 447 2.4E-36 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 PANTHER PTHR18866 4 650 0.0 T 13-09-2016 PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 SUPERFAMILY SSF56059 87 352 6.19E-70 T 13-09-2016 PMA3_RS08320 adb8988c1aa1a148c7aec6431316c9c7 651 Gene3D G3DSA:3.40.50.20 7 132 4.5E-47 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 Gene3D G3DSA:3.30.30.30 71 117 6.0E-8 T 13-09-2016 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 Gene3D G3DSA:3.90.640.10 239 310 5.3E-5 T 13-09-2016 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PRINTS PR00301 70kDa heat shock protein signature 70 78 7.3E-58 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PRINTS PR00301 70kDa heat shock protein signature 360 380 7.3E-58 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PRINTS PR00301 70kDa heat shock protein signature 48 60 7.3E-58 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PRINTS PR00301 70kDa heat shock protein signature 20 33 7.3E-58 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PRINTS PR00301 70kDa heat shock protein signature 152 172 7.3E-58 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PRINTS PR00301 70kDa heat shock protein signature 211 221 7.3E-58 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PRINTS PR00301 70kDa heat shock protein signature 386 405 7.3E-58 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PRINTS PR00301 70kDa heat shock protein signature 467 483 7.3E-58 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PRINTS PR00301 70kDa heat shock protein signature 329 345 7.3E-58 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PANTHER PTHR19375 19 621 4.9E-301 T 13-09-2016 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 Gene3D G3DSA:3.30.420.40 206 238 4.1E-31 T 13-09-2016 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 Gene3D G3DSA:3.30.420.40 314 356 4.1E-31 T 13-09-2016 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 SUPERFAMILY SSF53067 200 376 3.76E-49 T 13-09-2016 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 618 45.137 T 13-09-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 PANTHER PTHR19375:SF176 19 621 4.9E-301 T 13-09-2016 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 SUPERFAMILY SSF53067 19 197 2.59E-50 T 13-09-2016 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 Gene3D G3DSA:1.20.1270.10 529 617 8.1E-28 T 13-09-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 13-09-2016 IPR018181 Heat shock protein 70, conserved site PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 617 1.9E-273 T 13-09-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 13-09-2016 IPR018181 Heat shock protein 70, conserved site PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 105 119 - T 13-09-2016 IPR018181 Heat shock protein 70, conserved site PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 SUPERFAMILY SSF100934 505 617 1.1E-33 T 13-09-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 13-09-2016 IPR018181 Heat shock protein 70, conserved site PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 Gene3D G3DSA:2.60.34.10 388 528 2.6E-52 T 13-09-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 SUPERFAMILY SSF100920 383 535 7.59E-49 T 13-09-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 Gene3D G3DSA:3.30.420.40 133 205 7.6E-52 T 13-09-2016 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 Gene3D G3DSA:3.30.420.40 20 70 7.6E-52 T 13-09-2016 PMA3_RS24250 9865918d91c457d7fa6ff5d3c01977e3 621 Pfam PF00012 Hsp70 protein 21 601 6.1E-181 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS02070 42e5c55fc054bdacd76e531b803d310d 390 SMART SM00244 84 244 1.9E-30 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS02070 42e5c55fc054bdacd76e531b803d310d 390 SUPERFAMILY SSF117892 116 249 2.75E-22 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS02070 42e5c55fc054bdacd76e531b803d310d 390 PANTHER PTHR10264:SF51 4 389 4.2E-153 T 13-09-2016 IPR010201 HflK GO:0016021 PMA3_RS02070 42e5c55fc054bdacd76e531b803d310d 390 Pfam PF12221 Bacterial membrane protein N terminal 1 50 9.4E-17 T 13-09-2016 IPR020980 Menbrane protein HflK, N-terminal PMA3_RS02070 42e5c55fc054bdacd76e531b803d310d 390 PANTHER PTHR10264 4 389 4.2E-153 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS02070 42e5c55fc054bdacd76e531b803d310d 390 PRINTS PR00721 Stomatin signature 91 113 1.1E-6 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS02070 42e5c55fc054bdacd76e531b803d310d 390 PRINTS PR00721 Stomatin signature 220 238 1.1E-6 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS02070 42e5c55fc054bdacd76e531b803d310d 390 PRINTS PR00721 Stomatin signature 138 159 1.1E-6 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS02070 42e5c55fc054bdacd76e531b803d310d 390 Pfam PF01145 SPFH domain / Band 7 family 88 259 2.3E-27 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS02070 42e5c55fc054bdacd76e531b803d310d 390 TIGRFAM TIGR01933 hflK: HflK protein 86 348 1.4E-112 T 13-09-2016 IPR010201 HflK GO:0016021 PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 Pfam PF00072 Response regulator receiver domain 181 300 1.8E-14 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 Gene3D G3DSA:2.40.50.180 61 95 5.0E-6 T 13-09-2016 PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 Gene3D G3DSA:2.30.30.40 96 144 4.1E-6 T 13-09-2016 PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 PANTHER PTHR22617:SF30 1 169 7.6E-76 T 13-09-2016 PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 SUPERFAMILY SSF52172 177 304 3.27E-22 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 SMART SM00448 179 300 1.8E-9 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 PIRSF PIRSF002867 1 308 1.8E-104 T 13-09-2016 IPR024181 Chemotaxis response regulator CheV PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 SMART SM00260 17 153 1.1E-23 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 PANTHER PTHR22617 1 169 7.6E-76 T 13-09-2016 PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 Gene3D G3DSA:3.40.50.2300 177 304 2.7E-24 T 13-09-2016 PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 Pfam PF01584 CheW-like domain 21 155 6.6E-37 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS07200 1fa06a6848236bee72a2f046c54d524b 312 SUPERFAMILY SSF50341 16 157 1.12E-38 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS07715 79bf89e4ea5247c1fd514834e09ed86f 409 Pfam PF06224 Winged helix DNA-binding domain 40 381 1.9E-77 T 13-09-2016 IPR009351 Protein of unknown function DUF1006 PMA3_RS07715 79bf89e4ea5247c1fd514834e09ed86f 409 PANTHER PTHR30528 4 409 2.3E-111 T 13-09-2016 PMA3_RS23525 d6b64d75a86ad9a8b9d356f894f2cb90 367 SUPERFAMILY SSF53850 41 365 6.73E-52 T 13-09-2016 PMA3_RS23525 d6b64d75a86ad9a8b9d356f894f2cb90 367 Gene3D G3DSA:3.40.190.10 40 161 7.0E-21 T 13-09-2016 PMA3_RS23525 d6b64d75a86ad9a8b9d356f894f2cb90 367 Gene3D G3DSA:3.40.190.10 276 330 7.0E-21 T 13-09-2016 PMA3_RS23525 d6b64d75a86ad9a8b9d356f894f2cb90 367 Pfam PF13416 Bacterial extracellular solute-binding protein 61 325 3.6E-18 T 13-09-2016 PMA3_RS23525 d6b64d75a86ad9a8b9d356f894f2cb90 367 Gene3D G3DSA:3.40.190.10 162 245 5.5E-5 T 13-09-2016 PMA3_RS23525 d6b64d75a86ad9a8b9d356f894f2cb90 367 PANTHER PTHR30006:SF7 19 366 3.6E-31 T 13-09-2016 PMA3_RS23525 d6b64d75a86ad9a8b9d356f894f2cb90 367 PANTHER PTHR30006 19 366 3.6E-31 T 13-09-2016 PMA3_RS23525 d6b64d75a86ad9a8b9d356f894f2cb90 367 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 6 28 3.1E-4 T 13-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PMA3_RS17495 84b638b5a3ccb66ae02d049bc469195e 356 Pfam PF07143 CrtC N-terminal lipocalin domain 59 231 9.0E-55 T 13-09-2016 IPR010791 AttH domain PMA3_RS17495 84b638b5a3ccb66ae02d049bc469195e 356 SUPERFAMILY SSF159245 36 356 1.44E-109 T 13-09-2016 PMA3_RS17495 84b638b5a3ccb66ae02d049bc469195e 356 Pfam PF17186 Lipocalin-like domain 234 356 3.5E-42 T 13-09-2016 IPR033451 AttH, lipocalin-like domain PMA3_RS17495 84b638b5a3ccb66ae02d049bc469195e 356 Gene3D G3DSA:2.40.370.10 236 356 1.1E-43 T 13-09-2016 IPR023374 AttH-like domain PMA3_RS17495 84b638b5a3ccb66ae02d049bc469195e 356 Gene3D G3DSA:2.40.370.10 47 233 1.7E-71 T 13-09-2016 IPR023374 AttH-like domain PMA3_RS17495 84b638b5a3ccb66ae02d049bc469195e 356 PANTHER PTHR38591 26 356 1.3E-98 T 13-09-2016 PMA3_RS19020 bede90b8086501586c39073beb4ebde3 409 Pfam PF03573 outer membrane porin, OprD family 23 407 6.6E-136 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS19020 bede90b8086501586c39073beb4ebde3 409 PANTHER PTHR34596 1 409 1.3E-147 T 13-09-2016 PMA3_RS19020 bede90b8086501586c39073beb4ebde3 409 Gene3D G3DSA:2.40.160.10 28 409 2.5E-133 T 13-09-2016 IPR023614 Porin domain PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 PANTHER PTHR30204 1 131 7.8E-67 T 13-09-2016 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 Pfam PF09278 MerR, DNA binding 44 108 6.2E-21 T 13-09-2016 IPR015358 Transcription regulator MerR, DNA binding PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 Pfam PF00376 MerR family regulatory protein 2 39 1.0E-16 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 Gene3D G3DSA:1.10.1660.10 1 54 3.3E-26 T 13-09-2016 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.6E-10 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.6E-10 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.6E-10 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 PANTHER PTHR30204:SF16 1 131 7.8E-67 T 13-09-2016 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 SMART SM00422 1 70 2.7E-32 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 Gene3D G3DSA:1.10.1660.10 55 131 7.0E-32 T 13-09-2016 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.6E-54 T 13-09-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 PMA3_RS26530 83a0c6d208253df164e08cc771d2329b 137 SUPERFAMILY SSF46955 1 126 2.38E-40 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS28075 ede01ea8bc63c7de4e84c8849824db99 387 SUPERFAMILY SSF51197 89 386 6.18E-65 T 13-09-2016 PMA3_RS28075 ede01ea8bc63c7de4e84c8849824db99 387 Gene3D G3DSA:3.60.130.10 132 386 6.6E-50 T 13-09-2016 PMA3_RS28075 ede01ea8bc63c7de4e84c8849824db99 387 Pfam PF06155 Protein of unknown function (DUF971) 27 104 1.2E-10 T 13-09-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 PMA3_RS28075 ede01ea8bc63c7de4e84c8849824db99 387 PANTHER PTHR10696:SF33 29 387 1.5E-107 T 13-09-2016 PMA3_RS28075 ede01ea8bc63c7de4e84c8849824db99 387 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 135 372 9.5E-46 T 13-09-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PMA3_RS28075 ede01ea8bc63c7de4e84c8849824db99 387 TIGRFAM TIGR02409 carnitine_bodg: gamma-butyrobetaine hydroxylase 29 387 9.9E-137 T 13-09-2016 IPR012775 Gamma-butyrobetaine hydroxylase GO:0005506|GO:0008336|GO:0045329 KEGG: 00310+1.14.11.1|MetaCyc: PWY-3621|MetaCyc: PWY-6100|UniPathway: UPA00118 PMA3_RS28075 ede01ea8bc63c7de4e84c8849824db99 387 PANTHER PTHR10696 29 387 1.5E-107 T 13-09-2016 PMA3_RS09050 bb1b361e2e7192e3a36689e82323f330 274 PIRSF PIRSF001430 7 266 6.1E-73 T 13-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS09050 bb1b361e2e7192e3a36689e82323f330 274 Gene3D G3DSA:3.30.70.580 8 111 8.5E-36 T 13-09-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS09050 bb1b361e2e7192e3a36689e82323f330 274 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 7 250 34.436 T 13-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS09050 bb1b361e2e7192e3a36689e82323f330 274 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 8 245 4.7E-66 T 13-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS09050 bb1b361e2e7192e3a36689e82323f330 274 Pfam PF01416 tRNA pseudouridine synthase 149 250 1.5E-30 T 13-09-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS09050 bb1b361e2e7192e3a36689e82323f330 274 Pfam PF01416 tRNA pseudouridine synthase 14 109 2.0E-6 T 13-09-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS09050 bb1b361e2e7192e3a36689e82323f330 274 SUPERFAMILY SSF55120 6 265 1.08E-89 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS09050 bb1b361e2e7192e3a36689e82323f330 274 Gene3D G3DSA:3.30.70.660 113 249 1.0E-46 T 13-09-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS09050 bb1b361e2e7192e3a36689e82323f330 274 PANTHER PTHR11142 8 266 1.0E-91 T 13-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS27045 38b059f387adbd8666562f610c71fc06 265 SUPERFAMILY SSF56219 22 263 4.84E-48 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS27045 38b059f387adbd8666562f610c71fc06 265 Gene3D G3DSA:3.60.10.10 20 264 1.0E-20 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS27045 38b059f387adbd8666562f610c71fc06 265 PANTHER PTHR15822:SF7 1 265 5.4E-93 T 13-09-2016 PMA3_RS27045 38b059f387adbd8666562f610c71fc06 265 PANTHER PTHR15822 1 265 5.4E-93 T 13-09-2016 PMA3_RS27045 38b059f387adbd8666562f610c71fc06 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 256 2.3E-21 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 Gene3D G3DSA:3.30.1330.60 114 229 1.2E-39 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 PANTHER PTHR30128 103 229 1.9E-40 T 13-09-2016 PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 PRINTS PR01021 OMPA domain signature 127 149 8.5E-19 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 PRINTS PR01021 OMPA domain signature 158 173 8.5E-19 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 PRINTS PR01021 OMPA domain signature 173 189 8.5E-19 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 Gene3D G3DSA:4.10.1080.10 72 99 4.9E-5 T 13-09-2016 IPR028974 TSP type-3 repeat GO:0005509 PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 212 231 9.4E-5 T 13-09-2016 PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 144 170 9.4E-5 T 13-09-2016 PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 173 190 9.4E-5 T 13-09-2016 PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 Pfam PF00691 OmpA family 127 223 1.9E-24 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 SUPERFAMILY SSF103088 104 229 1.96E-35 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS05220 69296586f94071cf7bc44dc3b0188db4 231 SUPERFAMILY SSF103647 70 103 1.57E-8 T 13-09-2016 IPR028974 TSP type-3 repeat GO:0005509 PMA3_RS06830 4586f31bfb14110e57f84511338797f7 703 Gene3D G3DSA:3.40.720.10 313 609 1.4E-38 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS06830 4586f31bfb14110e57f84511338797f7 703 PANTHER PTHR10342 275 648 2.1E-83 T 13-09-2016 PMA3_RS06830 4586f31bfb14110e57f84511338797f7 703 SUPERFAMILY SSF53649 313 649 9.89E-62 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS06830 4586f31bfb14110e57f84511338797f7 703 PANTHER PTHR10342:SF236 275 648 2.1E-83 T 13-09-2016 PMA3_RS06830 4586f31bfb14110e57f84511338797f7 703 PIRSF PIRSF005091 15 695 4.3E-139 T 13-09-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 PMA3_RS06830 4586f31bfb14110e57f84511338797f7 703 Pfam PF00884 Sulfatase 313 591 9.3E-47 T 13-09-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PMA3_RS03230 bea76c9d99f6a12858b4c7923a8a7e68 315 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 3.0E-98 T 13-09-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PMA3_RS03230 bea76c9d99f6a12858b4c7923a8a7e68 315 PANTHER PTHR30426 1 312 2.4E-160 T 13-09-2016 PMA3_RS03230 bea76c9d99f6a12858b4c7923a8a7e68 315 Pfam PF02401 LytB protein 3 283 1.0E-93 T 13-09-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PMA3_RS03230 bea76c9d99f6a12858b4c7923a8a7e68 315 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 37.933 T 13-09-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 SMART SM00257 424 467 4.7E-10 T 13-09-2016 IPR018392 LysM domain PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 SMART SM00646 238 396 1.4E-66 T 13-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 Pfam PF11741 AMIN domain 35 133 3.7E-23 T 13-09-2016 IPR021731 AMIN domain PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 SUPERFAMILY SSF53187 176 272 2.51E-51 T 13-09-2016 PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 SUPERFAMILY SSF53187 323 400 2.51E-51 T 13-09-2016 PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 Gene3D G3DSA:3.10.350.10 424 468 3.4E-14 T 13-09-2016 IPR018392 LysM domain PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 178 396 1.9E-43 T 13-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 Gene3D G3DSA:3.40.630.40 176 273 8.5E-57 T 13-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 Gene3D G3DSA:3.40.630.40 324 400 8.5E-57 T 13-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 SUPERFAMILY SSF54106 425 467 2.09E-9 T 13-09-2016 IPR018392 LysM domain PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 PANTHER PTHR30404 6 429 2.9E-113 T 13-09-2016 PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 PANTHER PTHR30404:SF1 6 429 2.9E-113 T 13-09-2016 PMA3_RS02045 b99083d89d33a34e3d7b128f68bae6a8 475 Pfam PF01476 LysM domain 425 467 3.0E-10 T 13-09-2016 IPR018392 LysM domain PMA3_RS11545 454e3273d9e1105035323bcd8a20e306 1040 TIGRFAM TIGR02243 TIGR02243: putative baseplate assembly protein 668 987 1.1E-58 T 13-09-2016 IPR011749 Conserved hypothetical protein CHP02243 PMA3_RS11545 454e3273d9e1105035323bcd8a20e306 1040 SUPERFAMILY SSF56988 334 482 6.15E-45 T 13-09-2016 PMA3_RS11545 454e3273d9e1105035323bcd8a20e306 1040 Pfam PF04865 Baseplate J-like protein 793 958 5.8E-11 T 13-09-2016 IPR006949 Baseplate protein J-like PMA3_RS11545 454e3273d9e1105035323bcd8a20e306 1040 Pfam PF07691 PA14 domain 334 467 4.6E-30 T 13-09-2016 IPR011658 PA14 domain PMA3_RS11545 454e3273d9e1105035323bcd8a20e306 1040 Gene3D G3DSA:3.90.182.10 330 475 1.8E-51 T 13-09-2016 IPR011658 PA14 domain PMA3_RS11545 454e3273d9e1105035323bcd8a20e306 1040 SMART SM00758 332 468 1.2E-32 T 13-09-2016 IPR011658 PA14 domain PMA3_RS22535 ebe478b0ca94de6dd3fd3a51cfd7f6b9 320 PANTHER PTHR38782 1 316 2.9E-92 T 13-09-2016 PMA3_RS22535 ebe478b0ca94de6dd3fd3a51cfd7f6b9 320 Gene3D G3DSA:2.50.20.10 112 183 9.3E-10 T 13-09-2016 PMA3_RS22535 ebe478b0ca94de6dd3fd3a51cfd7f6b9 320 PANTHER PTHR38782:SF1 1 316 2.9E-92 T 13-09-2016 PMA3_RS22535 ebe478b0ca94de6dd3fd3a51cfd7f6b9 320 Pfam PF03888 MucB/RseB N-terminal domain 23 193 6.8E-55 T 13-09-2016 IPR033434 MucB/RseB, N-terminal PMA3_RS22535 ebe478b0ca94de6dd3fd3a51cfd7f6b9 320 Pfam PF17188 MucB/RseB C-terminal domain 212 310 8.2E-26 T 13-09-2016 IPR033436 MucB/RseB, C-terminal PMA3_RS22535 ebe478b0ca94de6dd3fd3a51cfd7f6b9 320 PIRSF PIRSF005427 3 317 4.8E-90 T 13-09-2016 IPR005588 MucB/RseB PMA3_RS12150 8012f7f0f002094d3c03aa6b6d4852d0 283 Gene3D G3DSA:3.30.750.24 162 254 1.3E-14 T 13-09-2016 IPR002645 STAS domain PMA3_RS12150 8012f7f0f002094d3c03aa6b6d4852d0 283 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 11 109 1.3E-18 T 13-09-2016 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain PMA3_RS12150 8012f7f0f002094d3c03aa6b6d4852d0 283 SUPERFAMILY SSF52091 161 271 7.26E-18 T 13-09-2016 IPR002645 STAS domain PMA3_RS12150 8012f7f0f002094d3c03aa6b6d4852d0 283 PANTHER PTHR33745:SF1 69 283 1.8E-66 T 13-09-2016 PMA3_RS12150 8012f7f0f002094d3c03aa6b6d4852d0 283 Pfam PF01740 STAS domain 168 254 1.0E-8 T 13-09-2016 IPR002645 STAS domain PMA3_RS12150 8012f7f0f002094d3c03aa6b6d4852d0 283 PANTHER PTHR33745 69 283 1.8E-66 T 13-09-2016 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 Gene3D G3DSA:1.10.287.130 238 288 1.2E-5 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 Gene3D G3DSA:3.30.565.10 302 447 2.2E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 SUPERFAMILY SSF55874 306 447 1.44E-29 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 SMART SM00387 343 448 7.3E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 446 2.6E-11 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 Pfam PF00672 HAMP domain 167 230 2.1E-6 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 SUPERFAMILY SSF47384 222 292 1.08E-5 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 PANTHER PTHR24423:SF496 62 85 8.7E-96 T 13-09-2016 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 PANTHER PTHR24423:SF496 180 448 8.7E-96 T 13-09-2016 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 PANTHER PTHR24423:SF496 21 46 8.7E-96 T 13-09-2016 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 3.0E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 3.0E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 3.0E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 PANTHER PTHR24423 62 85 8.7E-96 T 13-09-2016 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 PANTHER PTHR24423 180 448 8.7E-96 T 13-09-2016 PMA3_RS05850 cb966c85c33ce909831c883544ef6002 448 PANTHER PTHR24423 21 46 8.7E-96 T 13-09-2016 PMA3_RS11875 cf7ab99c3175a30753a77205fdf35852 402 Pfam PF00196 Bacterial regulatory proteins, luxR family 327 381 1.7E-6 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11875 cf7ab99c3175a30753a77205fdf35852 402 Gene3D G3DSA:3.30.450.20 191 310 6.3E-5 T 13-09-2016 PMA3_RS11875 cf7ab99c3175a30753a77205fdf35852 402 SUPERFAMILY SSF46894 316 383 2.41E-12 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS11875 cf7ab99c3175a30753a77205fdf35852 402 SMART SM00421 325 382 9.3E-9 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11875 cf7ab99c3175a30753a77205fdf35852 402 Gene3D G3DSA:1.10.10.10 322 384 1.3E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03295 3e27dfbdb8ceb1187784f428425a7f7f 320 PANTHER PTHR11079 6 319 5.7E-142 T 13-09-2016 PMA3_RS03295 3e27dfbdb8ceb1187784f428425a7f7f 320 Pfam PF01479 S4 domain 18 63 2.3E-7 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS03295 3e27dfbdb8ceb1187784f428425a7f7f 320 SUPERFAMILY SSF55120 75 314 1.25E-81 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS03295 3e27dfbdb8ceb1187784f428425a7f7f 320 Gene3D G3DSA:3.10.290.10 18 65 5.9E-7 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS03295 3e27dfbdb8ceb1187784f428425a7f7f 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 13-09-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS03295 3e27dfbdb8ceb1187784f428425a7f7f 320 PANTHER PTHR11079:SF73 6 319 5.7E-142 T 13-09-2016 PMA3_RS03295 3e27dfbdb8ceb1187784f428425a7f7f 320 Pfam PF00849 RNA pseudouridylate synthase 91 241 1.1E-33 T 13-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS03295 3e27dfbdb8ceb1187784f428425a7f7f 320 SUPERFAMILY SSF55174 17 104 1.08E-8 T 13-09-2016 PMA3_RS03295 3e27dfbdb8ceb1187784f428425a7f7f 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 9.6E-96 T 13-09-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS06365 4fbec1862f32c123f6ded3bcdadf5295 195 PANTHER PTHR10681 15 163 1.1E-20 T 13-09-2016 PMA3_RS06365 4fbec1862f32c123f6ded3bcdadf5295 195 PANTHER PTHR10681:SF104 15 163 1.1E-20 T 13-09-2016 PMA3_RS06365 4fbec1862f32c123f6ded3bcdadf5295 195 Pfam PF00578 AhpC/TSA family 19 145 1.6E-18 T 13-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS06365 4fbec1862f32c123f6ded3bcdadf5295 195 Gene3D G3DSA:3.40.30.10 19 149 2.8E-27 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06365 4fbec1862f32c123f6ded3bcdadf5295 195 SUPERFAMILY SSF52833 15 194 3.03E-36 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS11755 2e6d6ae036f4492a13237088630f8990 395 SUPERFAMILY SSF47203 235 375 8.38E-10 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11755 2e6d6ae036f4492a13237088630f8990 395 Gene3D G3DSA:1.10.540.10 2 114 8.2E-39 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11755 2e6d6ae036f4492a13237088630f8990 395 SUPERFAMILY SSF56645 8 209 2.62E-35 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS11755 2e6d6ae036f4492a13237088630f8990 395 PANTHER PTHR10909:SF316 4 385 7.3E-36 T 13-09-2016 PMA3_RS11755 2e6d6ae036f4492a13237088630f8990 395 PANTHER PTHR10909 4 385 7.3E-36 T 13-09-2016 PMA3_RS11755 2e6d6ae036f4492a13237088630f8990 395 Gene3D G3DSA:1.20.140.10 204 394 2.5E-36 T 13-09-2016 PMA3_RS11755 2e6d6ae036f4492a13237088630f8990 395 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 244 373 9.9E-30 T 13-09-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS11755 2e6d6ae036f4492a13237088630f8990 395 PIRSF PIRSF016578 1 395 1.8E-117 T 13-09-2016 PMA3_RS11755 2e6d6ae036f4492a13237088630f8990 395 Gene3D G3DSA:2.40.110.10 119 203 2.5E-25 T 13-09-2016 PMA3_RS11755 2e6d6ae036f4492a13237088630f8990 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 110 4.9E-6 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS02165 827d107669b66f5e57b55774728668be 767 Pfam PF11842 Domain of unknown function (DUF3362) 593 757 2.4E-51 T 13-09-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal PMA3_RS02165 827d107669b66f5e57b55774728668be 767 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 379 399 - T 13-09-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PMA3_RS02165 827d107669b66f5e57b55774728668be 767 Gene3D G3DSA:3.80.30.20 373 626 1.1E-48 T 13-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe PMA3_RS02165 827d107669b66f5e57b55774728668be 767 PANTHER PTHR32331 2 729 0.0 T 13-09-2016 PMA3_RS02165 827d107669b66f5e57b55774728668be 767 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 23 643 2.5E-262 T 13-09-2016 IPR022946 Uncharacterised protein family UPF0313 PMA3_RS02165 827d107669b66f5e57b55774728668be 767 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 22 694 49.557 T 13-09-2016 IPR022946 Uncharacterised protein family UPF0313 PMA3_RS02165 827d107669b66f5e57b55774728668be 767 SMART SM00729 375 628 1.3E-7 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS02165 827d107669b66f5e57b55774728668be 767 Pfam PF04055 Radical SAM superfamily 379 584 3.3E-21 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS02165 827d107669b66f5e57b55774728668be 767 Pfam PF08497 Radical SAM N-terminal 23 378 7.9E-144 T 13-09-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal PMA3_RS02165 827d107669b66f5e57b55774728668be 767 PANTHER PTHR32331:SF3 2 729 0.0 T 13-09-2016 PMA3_RS02165 827d107669b66f5e57b55774728668be 767 SUPERFAMILY SSF102114 469 619 3.14E-13 T 13-09-2016 PMA3_RS02165 827d107669b66f5e57b55774728668be 767 SUPERFAMILY SSF102114 356 439 3.14E-13 T 13-09-2016 PMA3_RS03245 870c86773a64dc95a396ca10ba668885 149 SUPERFAMILY SSF54523 12 128 2.98E-5 T 13-09-2016 PMA3_RS03245 870c86773a64dc95a396ca10ba668885 149 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 9 74 5.9E-27 T 13-09-2016 IPR013362 Pilus modification type IV, PilV PMA3_RS03245 870c86773a64dc95a396ca10ba668885 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS03245 870c86773a64dc95a396ca10ba668885 149 Pfam PF13633 Prokaryotic N-terminal methylation site 9 32 2.2E-8 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS03245 870c86773a64dc95a396ca10ba668885 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 1.5E-6 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 PANTHER PTHR13847:SF206 599 658 2.4E-86 T 13-09-2016 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 Gene3D G3DSA:3.50.50.60 278 341 4.5E-29 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 Gene3D G3DSA:3.50.50.60 392 470 4.5E-29 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 Gene3D G3DSA:3.50.50.60 565 650 4.5E-29 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 113 234 2.0E-40 T 13-09-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 SUPERFAMILY SSF53335 140 217 3.18E-8 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 SUPERFAMILY SSF53335 49 111 3.18E-8 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 PANTHER PTHR13847:SF206 218 579 2.4E-86 T 13-09-2016 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 PANTHER PTHR13847 218 579 2.4E-86 T 13-09-2016 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 PANTHER PTHR13847 599 658 2.4E-86 T 13-09-2016 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 SUPERFAMILY SSF51905 565 658 3.37E-33 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 SUPERFAMILY SSF51905 263 471 3.37E-33 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 Gene3D G3DSA:3.50.50.60 233 277 8.0E-8 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 Pfam PF01266 FAD dependent oxidoreductase 264 629 4.5E-45 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 Gene3D G3DSA:3.40.50.150 9 232 2.3E-90 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 6 653 26.002 T 13-09-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 PMA3_RS06875 f0e0ec258bada8d8dad5cfad5e84175e 660 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 264 658 1.6E-135 T 13-09-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 Gene3D G3DSA:1.20.1600.10 353 467 1.3E-96 T 13-09-2016 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 Gene3D G3DSA:1.20.1600.10 56 92 1.3E-96 T 13-09-2016 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 Gene3D G3DSA:1.20.1600.10 144 317 1.3E-96 T 13-09-2016 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 SUPERFAMILY SSF56954 8 469 3.14E-98 T 13-09-2016 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 Pfam PF02321 Outer membrane efflux protein 66 256 2.4E-27 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 Pfam PF02321 Outer membrane efflux protein 280 464 1.4E-22 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 466 6.8E-90 T 13-09-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 PANTHER PTHR30203 8 488 1.3E-101 T 13-09-2016 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 Gene3D G3DSA:2.20.200.10 318 334 8.4E-6 T 13-09-2016 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 Gene3D G3DSA:2.20.200.10 123 143 8.4E-6 T 13-09-2016 PMA3_RS14055 db9980e323312552c02cdeb9e2a13867 511 PANTHER PTHR30203:SF3 8 488 1.3E-101 T 13-09-2016 PMA3_RS02240 7cc4d089feba1458e26d243ed8915303 427 Pfam PF11862 Domain of unknown function (DUF3382) 14 111 1.8E-21 T 13-09-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal PMA3_RS02240 7cc4d089feba1458e26d243ed8915303 427 PANTHER PTHR30482:SF9 68 426 5.7E-178 T 13-09-2016 PMA3_RS02240 7cc4d089feba1458e26d243ed8915303 427 PANTHER PTHR30482 68 426 5.7E-178 T 13-09-2016 PMA3_RS02240 7cc4d089feba1458e26d243ed8915303 427 Pfam PF02653 Branched-chain amino acid transport system / permease component 119 404 9.1E-47 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS03720 93c07610744f6adb53695bc9b35e72a0 405 Gene3D G3DSA:1.20.1250.20 24 194 2.1E-18 T 13-09-2016 PMA3_RS03720 93c07610744f6adb53695bc9b35e72a0 405 Pfam PF07690 Major Facilitator Superfamily 30 262 6.2E-21 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS03720 93c07610744f6adb53695bc9b35e72a0 405 PANTHER PTHR23505 7 401 6.3E-131 T 13-09-2016 PMA3_RS03720 93c07610744f6adb53695bc9b35e72a0 405 PANTHER PTHR23505:SF8 7 401 6.3E-131 T 13-09-2016 PMA3_RS03720 93c07610744f6adb53695bc9b35e72a0 405 SUPERFAMILY SSF103473 16 402 1.44E-51 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS03720 93c07610744f6adb53695bc9b35e72a0 405 Gene3D G3DSA:1.20.1250.20 229 399 2.5E-18 T 13-09-2016 PMA3_RS18100 08bf11375f37f5a4837bb5c8e8b31ecf 455 Gene3D G3DSA:2.50.20.10 162 394 5.1E-26 T 13-09-2016 PMA3_RS18100 08bf11375f37f5a4837bb5c8e8b31ecf 455 Pfam PF07044 Protein of unknown function (DUF1329) 85 449 1.7E-118 T 13-09-2016 IPR010752 Protein of unknown function DUF1329 PMA3_RS05810 a181b611e7898f313dfb7e4e39235eb7 240 Pfam PF03963 Flagellar hook capping protein - N-terminal region 20 91 1.4E-23 T 13-09-2016 IPR005648 Flagellar hook capping protein PMA3_RS05810 a181b611e7898f313dfb7e4e39235eb7 240 Pfam PF13860 FlgD Ig-like domain 122 192 3.9E-19 T 13-09-2016 IPR025965 FlgD Ig-like domain PMA3_RS05810 a181b611e7898f313dfb7e4e39235eb7 240 PANTHER PTHR30435:SF15 24 226 6.5E-56 T 13-09-2016 PMA3_RS05810 a181b611e7898f313dfb7e4e39235eb7 240 PANTHER PTHR30435 24 226 6.5E-56 T 13-09-2016 PMA3_RS05810 a181b611e7898f313dfb7e4e39235eb7 240 Pfam PF13861 FlgD Tudor-like domain 100 236 2.4E-19 T 13-09-2016 IPR025963 FlgD Tudor-like domain PMA3_RS10525 90f1a463be7948aef0b236ef1d3cecc8 337 PANTHER PTHR30535 25 318 1.5E-31 T 13-09-2016 PMA3_RS10525 90f1a463be7948aef0b236ef1d3cecc8 337 Pfam PF01497 Periplasmic binding protein 47 310 1.0E-40 T 13-09-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PMA3_RS10525 90f1a463be7948aef0b236ef1d3cecc8 337 Gene3D G3DSA:3.40.50.1980 203 331 1.5E-20 T 13-09-2016 PMA3_RS10525 90f1a463be7948aef0b236ef1d3cecc8 337 SUPERFAMILY SSF53807 43 330 6.28E-39 T 13-09-2016 PMA3_RS10525 90f1a463be7948aef0b236ef1d3cecc8 337 Gene3D G3DSA:3.40.50.1980 43 188 1.2E-12 T 13-09-2016 PMA3_RS10525 90f1a463be7948aef0b236ef1d3cecc8 337 PANTHER PTHR30535:SF7 25 318 1.5E-31 T 13-09-2016 PMA3_RS15280 00dc954f125459412c7f4374a3ec261b 794 PANTHER PTHR33406:SF2 5 105 8.9E-155 T 13-09-2016 PMA3_RS15280 00dc954f125459412c7f4374a3ec261b 794 PANTHER PTHR33406:SF2 140 777 8.9E-155 T 13-09-2016 PMA3_RS15280 00dc954f125459412c7f4374a3ec261b 794 PANTHER PTHR33406 5 105 8.9E-155 T 13-09-2016 PMA3_RS15280 00dc954f125459412c7f4374a3ec261b 794 SUPERFAMILY SSF82866 208 395 1.31E-27 T 13-09-2016 PMA3_RS15280 00dc954f125459412c7f4374a3ec261b 794 Pfam PF03176 MMPL family 479 776 5.4E-29 T 13-09-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PMA3_RS15280 00dc954f125459412c7f4374a3ec261b 794 Gene3D G3DSA:1.20.1640.10 580 784 3.8E-32 T 13-09-2016 PMA3_RS15280 00dc954f125459412c7f4374a3ec261b 794 Gene3D G3DSA:1.20.1640.10 203 403 4.3E-27 T 13-09-2016 PMA3_RS15280 00dc954f125459412c7f4374a3ec261b 794 SUPERFAMILY SSF82866 579 780 1.02E-36 T 13-09-2016 PMA3_RS15280 00dc954f125459412c7f4374a3ec261b 794 PANTHER PTHR33406 140 777 8.9E-155 T 13-09-2016 PMA3_RS15280 00dc954f125459412c7f4374a3ec261b 794 Pfam PF02460 Patched family 240 308 2.1E-4 T 13-09-2016 IPR003392 Protein patched/dispatched GO:0016021 PMA3_RS01425 b6e725ccb0f5be9aff647963f9fb3503 559 PANTHER PTHR36837:SF2 1 559 1.8E-268 T 13-09-2016 PMA3_RS01425 b6e725ccb0f5be9aff647963f9fb3503 559 Pfam PF00561 alpha/beta hydrolase fold 249 485 1.1E-21 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01425 b6e725ccb0f5be9aff647963f9fb3503 559 SUPERFAMILY SSF53474 199 483 7.25E-36 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01425 b6e725ccb0f5be9aff647963f9fb3503 559 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 75 243 7.8E-64 T 13-09-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PMA3_RS01425 b6e725ccb0f5be9aff647963f9fb3503 559 TIGRFAM TIGR01839 PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II 1 559 0.0 T 13-09-2016 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PMA3_RS01425 b6e725ccb0f5be9aff647963f9fb3503 559 PANTHER PTHR36837 1 559 1.8E-268 T 13-09-2016 PMA3_RS01425 b6e725ccb0f5be9aff647963f9fb3503 559 Gene3D G3DSA:3.40.50.1820 160 491 5.9E-55 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 PANTHER PTHR10742:SF277 185 247 2.0E-24 T 13-09-2016 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 PANTHER PTHR10742:SF277 335 630 2.0E-24 T 13-09-2016 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 PANTHER PTHR10742:SF277 36 167 2.0E-24 T 13-09-2016 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 Gene3D G3DSA:3.50.50.60 559 604 5.5E-15 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 Gene3D G3DSA:3.50.50.60 56 91 5.5E-15 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 Gene3D G3DSA:3.50.50.60 362 453 5.5E-15 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 SUPERFAMILY SSF51905 351 468 8.2E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 SUPERFAMILY SSF51905 589 626 8.2E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 SUPERFAMILY SSF51905 58 304 8.2E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 PANTHER PTHR10742 185 247 2.0E-24 T 13-09-2016 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 PANTHER PTHR10742 335 630 2.0E-24 T 13-09-2016 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 PANTHER PTHR10742 36 167 2.0E-24 T 13-09-2016 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 Pfam PF01593 Flavin containing amine oxidoreductase 70 615 5.5E-28 T 13-09-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 Gene3D G3DSA:3.90.660.10 92 173 5.8E-17 T 13-09-2016 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 Gene3D G3DSA:3.90.660.10 457 537 5.8E-17 T 13-09-2016 PMA3_RS04015 ac9d856600d22c2ad5c817336255c27f 648 SUPERFAMILY SSF54373 454 568 1.9E-9 T 13-09-2016 PMA3_RS20175 1a857056f0a521e156fb37318db04628 855 Gene3D G3DSA:3.30.20.10 751 796 8.1E-7 T 13-09-2016 PMA3_RS20175 1a857056f0a521e156fb37318db04628 855 SUPERFAMILY SSF53955 649 690 5.06E-26 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS20175 1a857056f0a521e156fb37318db04628 855 SUPERFAMILY SSF53955 728 849 5.06E-26 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS20175 1a857056f0a521e156fb37318db04628 855 ProSitePatterns PS00018 EF-hand calcium-binding domain. 518 530 - T 13-09-2016 IPR018247 EF-Hand 1, calcium-binding site PMA3_RS20175 1a857056f0a521e156fb37318db04628 855 PANTHER PTHR34408 646 684 6.5E-14 T 13-09-2016 PMA3_RS20175 1a857056f0a521e156fb37318db04628 855 PANTHER PTHR34408 729 854 6.5E-14 T 13-09-2016 PMA3_RS05785 a3665f1bb570225b1d5d09f1c6471ced 253 Pfam PF13144 Chaperone for flagella basal body P-ring formation 54 251 2.1E-63 T 13-09-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PMA3_RS05785 a3665f1bb570225b1d5d09f1c6471ced 253 PANTHER PTHR36307 34 253 2.1E-42 T 13-09-2016 PMA3_RS05785 a3665f1bb570225b1d5d09f1c6471ced 253 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 116 251 1.3E-39 T 13-09-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PMA3_RS05785 a3665f1bb570225b1d5d09f1c6471ced 253 SMART SM00858 128 190 3.6E-10 T 13-09-2016 IPR013974 SAF domain PMA3_RS15190 b45cd80be2f551ad0859068aee38bfbd 579 PANTHER PTHR22550 8 528 1.4E-77 T 13-09-2016 PMA3_RS15190 b45cd80be2f551ad0859068aee38bfbd 579 Pfam PF00515 Tetratricopeptide repeat 405 435 1.2E-8 T 13-09-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 PMA3_RS15190 b45cd80be2f551ad0859068aee38bfbd 579 SUPERFAMILY SSF48452 373 447 1.69E-11 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS15190 b45cd80be2f551ad0859068aee38bfbd 579 SMART SM00028 403 436 5.4E-7 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS15190 b45cd80be2f551ad0859068aee38bfbd 579 PANTHER PTHR22550:SF5 8 528 1.4E-77 T 13-09-2016 PMA3_RS15190 b45cd80be2f551ad0859068aee38bfbd 579 SUPERFAMILY SSF53300 94 275 1.86E-10 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15190 b45cd80be2f551ad0859068aee38bfbd 579 Gene3D G3DSA:1.25.40.10 539 575 8.5E-12 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS15190 b45cd80be2f551ad0859068aee38bfbd 579 Gene3D G3DSA:1.25.40.10 379 452 8.5E-12 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS15190 b45cd80be2f551ad0859068aee38bfbd 579 Pfam PF13519 von Willebrand factor type A domain 96 199 2.0E-8 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS04800 d485288066f8e888f3bfdc2380f316cb 120 Gene3D G3DSA:3.40.30.10 8 119 1.8E-42 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS04800 d485288066f8e888f3bfdc2380f316cb 120 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 8 116 2.1E-29 T 13-09-2016 IPR006504 Transcriptional regulator Spx/MgsR PMA3_RS04800 d485288066f8e888f3bfdc2380f316cb 120 Pfam PF03960 ArsC family 45 117 9.0E-17 T 13-09-2016 IPR006660 Arsenate reductase-like PMA3_RS04800 d485288066f8e888f3bfdc2380f316cb 120 PANTHER PTHR30041 6 120 5.1E-43 T 13-09-2016 PMA3_RS04800 d485288066f8e888f3bfdc2380f316cb 120 PANTHER PTHR30041:SF3 6 120 5.1E-43 T 13-09-2016 PMA3_RS04800 d485288066f8e888f3bfdc2380f316cb 120 SUPERFAMILY SSF52833 8 119 3.17E-33 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS16015 caa173e0834e7cdcb89d64f5135c79b4 345 SUPERFAMILY SSF55869 33 94 1.11E-22 T 13-09-2016 PMA3_RS16015 caa173e0834e7cdcb89d64f5135c79b4 345 Gene3D G3DSA:3.90.15.10 98 228 6.6E-43 T 13-09-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 PMA3_RS16015 caa173e0834e7cdcb89d64f5135c79b4 345 SUPERFAMILY SSF56349 89 325 6.59E-74 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS16015 caa173e0834e7cdcb89d64f5135c79b4 345 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 93 296 1.3E-33 T 13-09-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 PMA3_RS16015 caa173e0834e7cdcb89d64f5135c79b4 345 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 133 152 2.2E-8 T 13-09-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PMA3_RS16015 caa173e0834e7cdcb89d64f5135c79b4 345 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 156 170 2.2E-8 T 13-09-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PMA3_RS16015 caa173e0834e7cdcb89d64f5135c79b4 345 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 177 193 2.2E-8 T 13-09-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PMA3_RS16015 caa173e0834e7cdcb89d64f5135c79b4 345 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 242 256 2.2E-8 T 13-09-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PMA3_RS16015 caa173e0834e7cdcb89d64f5135c79b4 345 Gene3D G3DSA:1.20.120.380 243 322 3.7E-27 T 13-09-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 PMA3_RS27605 d8c0d713057d22d2e7ec18b95723c6f5 172 PANTHER PTHR20941 3 165 1.2E-71 T 13-09-2016 PMA3_RS27605 d8c0d713057d22d2e7ec18b95723c6f5 172 SUPERFAMILY SSF55083 4 152 8.11E-37 T 13-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS27605 d8c0d713057d22d2e7ec18b95723c6f5 172 Gene3D G3DSA:3.30.70.560 5 152 5.0E-33 T 13-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS27605 d8c0d713057d22d2e7ec18b95723c6f5 172 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 130 2.8E-20 T 13-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS27605 d8c0d713057d22d2e7ec18b95723c6f5 172 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 130 9.1E-21 T 13-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS27605 d8c0d713057d22d2e7ec18b95723c6f5 172 PANTHER PTHR20941:SF12 3 165 1.2E-71 T 13-09-2016 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 Pfam PF00226 DnaJ domain 5 67 1.1E-26 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 Pfam PF00684 DnaJ central domain 146 206 8.5E-15 T 13-09-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 Pfam PF01556 DnaJ C terminal domain 120 332 1.0E-42 T 13-09-2016 IPR002939 Chaperone DnaJ, C-terminal PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 SUPERFAMILY SSF46565 1 108 1.83E-36 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 SUPERFAMILY SSF57938 133 210 8.24E-23 T 13-09-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 13-09-2016 IPR018253 DnaJ domain, conserved site PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 Gene3D G3DSA:2.60.260.20 255 332 2.9E-24 T 13-09-2016 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 SUPERFAMILY SSF49493 258 343 4.58E-23 T 13-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 SMART SM00271 4 62 1.5E-31 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 SUPERFAMILY SSF49493 113 168 2.35E-21 T 13-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 SUPERFAMILY SSF49493 212 266 2.35E-21 T 13-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 Gene3D G3DSA:2.10.230.10 140 209 6.8E-25 T 13-09-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 8.3E-138 T 13-09-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 42.239 T 13-09-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 PANTHER PTHR24078 1 365 1.3E-163 T 13-09-2016 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 Gene3D G3DSA:1.10.287.110 1 102 1.8E-36 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 Gene3D G3DSA:2.60.260.20 210 253 6.4E-22 T 13-09-2016 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 Gene3D G3DSA:2.60.260.20 107 139 6.4E-22 T 13-09-2016 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 PANTHER PTHR24078:SF231 1 365 1.3E-163 T 13-09-2016 PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 PRINTS PR00625 DnaJ domain signature 25 40 3.7E-31 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 PRINTS PR00625 DnaJ domain signature 42 62 3.7E-31 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 PRINTS PR00625 DnaJ domain signature 62 81 3.7E-31 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS25575 de530fc8fa47511d0319caa6a0bb1c1d 374 PRINTS PR00625 DnaJ domain signature 7 25 3.7E-31 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS18020 7fd5981259efe9debad643df86f03f52 455 Pfam PF07690 Major Facilitator Superfamily 33 395 1.7E-48 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS18020 7fd5981259efe9debad643df86f03f52 455 PANTHER PTHR11662 12 428 9.0E-129 T 13-09-2016 PMA3_RS18020 7fd5981259efe9debad643df86f03f52 455 Gene3D G3DSA:1.20.1250.20 237 435 8.7E-22 T 13-09-2016 PMA3_RS18020 7fd5981259efe9debad643df86f03f52 455 PANTHER PTHR11662:SF3 12 428 9.0E-129 T 13-09-2016 PMA3_RS18020 7fd5981259efe9debad643df86f03f52 455 SUPERFAMILY SSF103473 11 437 2.49E-83 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS18020 7fd5981259efe9debad643df86f03f52 455 Gene3D G3DSA:1.20.1250.20 24 222 6.3E-44 T 13-09-2016 PMA3_RS19430 3cb3ab7c30b4774c7e889d0dde06f16e 388 PANTHER PTHR22604:SF123 7 372 1.8E-56 T 13-09-2016 PMA3_RS19430 3cb3ab7c30b4774c7e889d0dde06f16e 388 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 152 273 4.2E-7 T 13-09-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 PMA3_RS19430 3cb3ab7c30b4774c7e889d0dde06f16e 388 PANTHER PTHR22604 7 372 1.8E-56 T 13-09-2016 PMA3_RS19430 3cb3ab7c30b4774c7e889d0dde06f16e 388 SUPERFAMILY SSF55347 146 314 1.8E-31 T 13-09-2016 PMA3_RS19430 3cb3ab7c30b4774c7e889d0dde06f16e 388 Gene3D G3DSA:3.40.50.720 6 159 9.8E-33 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS19430 3cb3ab7c30b4774c7e889d0dde06f16e 388 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 138 7.6E-18 T 13-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PMA3_RS19430 3cb3ab7c30b4774c7e889d0dde06f16e 388 Gene3D G3DSA:3.30.360.10 160 282 3.8E-34 T 13-09-2016 PMA3_RS19430 3cb3ab7c30b4774c7e889d0dde06f16e 388 Gene3D G3DSA:3.30.360.10 330 374 3.8E-34 T 13-09-2016 PMA3_RS19430 3cb3ab7c30b4774c7e889d0dde06f16e 388 SUPERFAMILY SSF51735 5 170 6.7E-33 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03605 ffddc209d62741e5b0232e99adae64c5 206 Pfam PF01794 Ferric reductase like transmembrane component 48 154 1.4E-14 T 13-09-2016 IPR013130 Ferric reductase transmembrane component-like domain PMA3_RS03605 ffddc209d62741e5b0232e99adae64c5 206 PANTHER PTHR36964 2 202 3.3E-62 T 13-09-2016 PMA3_RS03605 ffddc209d62741e5b0232e99adae64c5 206 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 194 23.093 T 13-09-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 PRINTS PR00811 Bacterial general secretion pathway protein D signature 672 686 4.4E-18 T 13-09-2016 IPR001775 GspD/PilQ family PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 PRINTS PR00811 Bacterial general secretion pathway protein D signature 444 454 4.4E-18 T 13-09-2016 IPR001775 GspD/PilQ family PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 PRINTS PR00811 Bacterial general secretion pathway protein D signature 649 667 4.4E-18 T 13-09-2016 IPR001775 GspD/PilQ family PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 PRINTS PR00811 Bacterial general secretion pathway protein D signature 524 548 4.4E-18 T 13-09-2016 IPR001775 GspD/PilQ family PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 Pfam PF00263 Bacterial type II and III secretion system protein 528 684 3.4E-49 T 13-09-2016 IPR004846 Type II/III secretion system GO:0009306 PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 Pfam PF03958 Bacterial type II/III secretion system short domain 379 444 2.3E-12 T 13-09-2016 IPR005644 NolW-like PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 PANTHER PTHR30604 1 693 5.0E-123 T 13-09-2016 PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 Pfam PF07660 Secretin and TonB N terminus short domain 305 351 8.6E-8 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 Pfam PF11741 AMIN domain 37 121 1.5E-6 T 13-09-2016 IPR021731 AMIN domain PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 SMART SM00965 304 352 8.2E-10 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 279 685 5.1E-162 T 13-09-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 PMA3_RS01505 3b0eb5d905ea5e931f4140dfb3cf6a05 693 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 630 663 - T 13-09-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 PANTHER PTHR26402:SF576 4 225 4.6E-143 T 13-09-2016 PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 6.8E-25 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 SMART SM00448 4 117 2.5E-45 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 3 226 8.8E-109 T 13-09-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 SUPERFAMILY SSF46894 129 226 4.25E-29 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 SUPERFAMILY SSF52172 3 126 1.21E-43 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 SMART SM00862 151 225 7.6E-25 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 PANTHER PTHR26402 4 225 4.6E-143 T 13-09-2016 PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 Pfam PF00072 Response regulator receiver domain 6 117 5.6E-31 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 Gene3D G3DSA:3.40.50.2300 4 124 1.4E-42 T 13-09-2016 PMA3_RS29665 c5d983d018137d95ca170b0d1d5c7e82 229 Gene3D G3DSA:1.10.10.10 130 227 6.3E-33 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 Gene3D G3DSA:1.10.486.10 384 523 9.9E-37 T 13-09-2016 PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 PANTHER PTHR11070:SF19 1 650 0.0 T 13-09-2016 PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 265 3.1E-71 T 13-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 Gene3D G3DSA:3.40.50.300 551 640 1.7E-65 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 Gene3D G3DSA:3.40.50.300 280 383 1.7E-65 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 Gene3D G3DSA:3.40.50.300 182 279 9.7E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 Gene3D G3DSA:3.40.50.300 2 105 9.7E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 Gene3D G3DSA:1.10.10.160 109 181 4.5E-18 T 13-09-2016 IPR013986 DExx box DNA helicase domain PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 PANTHER PTHR11070 1 650 0.0 T 13-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 SUPERFAMILY SSF52540 2 638 1.55E-161 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 3 668 0.0 T 13-09-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 668 39.799 T 13-09-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 PMA3_RS29385 2872688cbf1ab8c68a1146da7c794278 669 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 9.2E-67 T 13-09-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PMA3_RS01645 4a76cf6941fc9709f34cd799a6fc65e8 313 PANTHER PTHR30606 1 310 1.4E-26 T 13-09-2016 PMA3_RS01645 4a76cf6941fc9709f34cd799a6fc65e8 313 PIRSF PIRSF028561 3 313 2.6E-132 T 13-09-2016 IPR014548 Predicted acyltransferase PMA3_RS01645 4a76cf6941fc9709f34cd799a6fc65e8 313 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 18 307 6.4E-15 T 13-09-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 SMART SM00344 8 117 6.3E-34 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 SUPERFAMILY SSF46785 7 67 5.96E-12 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 26 52 - T 13-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 2.8E-14 T 13-09-2016 PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 Gene3D G3DSA:1.10.10.10 6 54 3.7E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 PANTHER PTHR30154 1 157 8.2E-44 T 13-09-2016 PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 Gene3D G3DSA:3.30.70.920 61 154 2.2E-22 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 PANTHER PTHR30154:SF28 1 157 8.2E-44 T 13-09-2016 PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 Pfam PF01037 Lrp/AsnC ligand binding domain 74 147 1.3E-18 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 SUPERFAMILY SSF54909 69 152 4.16E-17 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.7E-9 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.7E-9 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS14590 1a77e45352c8ac8036975f7e72bd801a 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.7E-9 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS05635 7675de7d32c71b9fcad770035bed7bb9 341 PANTHER PTHR30420 1 341 1.6E-185 T 13-09-2016 PMA3_RS05635 7675de7d32c71b9fcad770035bed7bb9 341 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 2 334 1.5E-155 T 13-09-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS05635 7675de7d32c71b9fcad770035bed7bb9 341 Gene3D G3DSA:2.40.40.20 278 334 4.9E-7 T 13-09-2016 PMA3_RS05635 7675de7d32c71b9fcad770035bed7bb9 341 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 333 1.8E-135 T 13-09-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS05635 7675de7d32c71b9fcad770035bed7bb9 341 PANTHER PTHR30420:SF1 1 341 1.6E-185 T 13-09-2016 PMA3_RS05635 7675de7d32c71b9fcad770035bed7bb9 341 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 2 334 3.3E-143 T 13-09-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS05635 7675de7d32c71b9fcad770035bed7bb9 341 SUPERFAMILY SSF55729 1 334 1.67E-127 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS05635 7675de7d32c71b9fcad770035bed7bb9 341 Gene3D G3DSA:3.40.630.30 115 140 4.2E-6 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS05635 7675de7d32c71b9fcad770035bed7bb9 341 Gene3D G3DSA:3.40.630.30 1 74 4.2E-6 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 PANTHER PTHR22939 205 450 1.5E-81 T 13-09-2016 PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 SUPERFAMILY SSF50156 210 290 8.54E-15 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 Gene3D G3DSA:2.30.42.10 208 295 2.0E-16 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 PANTHER PTHR22939:SF78 205 450 1.5E-81 T 13-09-2016 PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 Pfam PF02163 Peptidase family M50 11 437 2.9E-83 T 13-09-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 Pfam PF13180 PDZ domain 227 289 1.6E-8 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 SMART SM00228 211 280 3.5E-7 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 SMART SM00228 114 186 1.6E-6 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 SUPERFAMILY SSF50156 87 188 2.76E-14 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 450 4.8E-123 T 13-09-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 PMA3_RS04860 4f83935f0eb22dc249bb94a3b68acb5d 450 Gene3D G3DSA:2.30.42.10 95 189 4.8E-16 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS07895 b3f88143adef04c430d829c3e17d9b33 381 PIRSF PIRSF004925 2 381 1.3E-101 T 13-09-2016 IPR026032 Probable 3-phenylpropionic acid transporter PMA3_RS07895 b3f88143adef04c430d829c3e17d9b33 381 PANTHER PTHR23522 1 381 1.9E-113 T 13-09-2016 PMA3_RS07895 b3f88143adef04c430d829c3e17d9b33 381 Gene3D G3DSA:1.20.1250.20 193 380 2.2E-28 T 13-09-2016 PMA3_RS07895 b3f88143adef04c430d829c3e17d9b33 381 Gene3D G3DSA:1.20.1250.20 6 180 1.2E-15 T 13-09-2016 PMA3_RS07895 b3f88143adef04c430d829c3e17d9b33 381 Pfam PF12832 MFS_1 like family 6 359 1.4E-85 T 13-09-2016 IPR024989 Major facilitator superfamily associated domain PMA3_RS07895 b3f88143adef04c430d829c3e17d9b33 381 SUPERFAMILY SSF103473 6 379 3.01E-44 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS07895 b3f88143adef04c430d829c3e17d9b33 381 PANTHER PTHR23522:SF3 1 381 1.9E-113 T 13-09-2016 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 Pfam PF00361 Proton-conducting membrane transporter 126 402 2.5E-64 T 13-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 822 943 6.1E-34 T 13-09-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 1.6E-40 T 13-09-2016 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 1.6E-40 T 13-09-2016 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 1.6E-40 T 13-09-2016 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 1.6E-40 T 13-09-2016 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 1.6E-40 T 13-09-2016 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 1.6E-40 T 13-09-2016 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 1.6E-40 T 13-09-2016 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 PANTHER PTHR22773:SF46 1 576 6.1E-210 T 13-09-2016 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 PANTHER PTHR22773 1 576 6.1E-210 T 13-09-2016 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 Pfam PF13244 Domain of unknown function (DUF4040) 615 680 2.3E-20 T 13-09-2016 IPR025383 Domain of unknown function DUF4040 PMA3_RS10890 326c8b74d4ef05b6a06a1f714b7105a3 972 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 113 1.7E-9 T 13-09-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 SUPERFAMILY SSF53955 164 383 6.75E-8 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 Gene3D G3DSA:1.10.3810.10 164 383 4.3E-7 T 13-09-2016 PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 SUPERFAMILY SSF56601 750 1022 2.25E-26 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 Pfam PF00912 Transglycosylase 156 354 8.3E-26 T 13-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 Pfam PF00905 Penicillin binding protein transpeptidase domain 845 949 3.4E-6 T 13-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 SUPERFAMILY SSF56601 600 636 1.0E-6 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 SUPERFAMILY SSF56601 506 545 1.0E-6 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 SUPERFAMILY SSF56601 899 977 1.0E-6 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 SUPERFAMILY SSF56601 697 711 1.0E-6 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 Gene3D G3DSA:3.40.710.10 411 528 2.9E-43 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 Gene3D G3DSA:3.40.710.10 576 663 2.9E-43 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS23975 e667d4d1e5a925fae265f59707bb2a5b 1045 Gene3D G3DSA:3.40.710.10 846 1006 2.9E-43 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS28520 33601917b87f9283edd61bb2d51eba5f 241 Pfam PF02390 Putative methyltransferase 66 235 4.0E-54 T 13-09-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PMA3_RS28520 33601917b87f9283edd61bb2d51eba5f 241 PANTHER PTHR23417:SF14 15 240 6.5E-76 T 13-09-2016 PMA3_RS28520 33601917b87f9283edd61bb2d51eba5f 241 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 26 240 29.572 T 13-09-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PMA3_RS28520 33601917b87f9283edd61bb2d51eba5f 241 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 53 240 1.3E-59 T 13-09-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PMA3_RS28520 33601917b87f9283edd61bb2d51eba5f 241 Gene3D G3DSA:3.40.50.150 62 209 9.8E-13 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS28520 33601917b87f9283edd61bb2d51eba5f 241 SUPERFAMILY SSF53335 19 239 1.9E-38 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS28520 33601917b87f9283edd61bb2d51eba5f 241 PANTHER PTHR23417 15 240 6.5E-76 T 13-09-2016 PMA3_RS00035 2291840f19f2f380d9310a012846cce8 262 Gene3D G3DSA:1.10.3470.10 39 251 1.8E-6 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS00035 2291840f19f2f380d9310a012846cce8 262 Pfam PF00950 ABC 3 transport family 2 256 4.7E-76 T 13-09-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 PMA3_RS00035 2291840f19f2f380d9310a012846cce8 262 SUPERFAMILY SSF81345 3 253 3.92E-38 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS00035 2291840f19f2f380d9310a012846cce8 262 PANTHER PTHR30477:SF0 3 260 6.7E-87 T 13-09-2016 PMA3_RS00035 2291840f19f2f380d9310a012846cce8 262 PANTHER PTHR30477 3 260 6.7E-87 T 13-09-2016 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 Gene3D G3DSA:3.20.20.210 402 769 1.5E-132 T 13-09-2016 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 Gene3D G3DSA:3.20.20.210 4 400 8.8E-151 T 13-09-2016 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 PIRSF PIRSF000382 1 770 0.0 T 13-09-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 SUPERFAMILY SSF51726 406 767 4.06E-119 T 13-09-2016 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 PANTHER PTHR30519:SF0 1 770 0.0 T 13-09-2016 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 768 37.31 T 13-09-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 SUPERFAMILY SSF51726 3 404 6.54E-115 T 13-09-2016 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 441 763 6.2E-153 T 13-09-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 PANTHER PTHR30519 1 770 0.0 T 13-09-2016 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 322 7.7E-117 T 13-09-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 PMA3_RS23880 d39607e1ba7f5e77a124b107a4a10a32 770 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 768 0.0 T 13-09-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 PANTHER PTHR21432 308 334 1.8E-143 T 13-09-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 PANTHER PTHR21432 93 275 1.8E-143 T 13-09-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 Gene3D G3DSA:3.40.810.20 399 508 5.8E-9 T 13-09-2016 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 361 524 1.4E-43 T 13-09-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 Gene3D G3DSA:3.30.750.70 224 269 1.4E-33 T 13-09-2016 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 Gene3D G3DSA:3.30.750.70 303 374 1.4E-33 T 13-09-2016 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 PANTHER PTHR21432:SF18 1 64 1.8E-143 T 13-09-2016 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 PANTHER PTHR21432:SF18 353 579 1.8E-143 T 13-09-2016 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 SUPERFAMILY SSF100950 300 552 7.28E-43 T 13-09-2016 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 SUPERFAMILY SSF100950 224 268 7.28E-43 T 13-09-2016 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 PANTHER PTHR21432:SF18 308 334 1.8E-143 T 13-09-2016 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 PANTHER PTHR21432:SF18 93 275 1.8E-143 T 13-09-2016 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 PANTHER PTHR21432 1 64 1.8E-143 T 13-09-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PMA3_RS29395 8da60a972a10b1ee53d88988fc190cb8 641 PANTHER PTHR21432 353 579 1.8E-143 T 13-09-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PMA3_RS16360 690092d3f22c1fd9c599aa43875e1a0b 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 20 230 9.3E-48 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS16360 690092d3f22c1fd9c599aa43875e1a0b 279 PANTHER PTHR21091:SF16 16 232 6.0E-74 T 13-09-2016 PMA3_RS16360 690092d3f22c1fd9c599aa43875e1a0b 279 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 98 131 - T 13-09-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS16360 690092d3f22c1fd9c599aa43875e1a0b 279 Gene3D G3DSA:3.30.950.10 134 258 3.8E-40 T 13-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PMA3_RS16360 690092d3f22c1fd9c599aa43875e1a0b 279 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 23 37 - T 13-09-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS16360 690092d3f22c1fd9c599aa43875e1a0b 279 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 18 253 1.2E-85 T 13-09-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS16360 690092d3f22c1fd9c599aa43875e1a0b 279 PANTHER PTHR21091 16 232 6.0E-74 T 13-09-2016 PMA3_RS16360 690092d3f22c1fd9c599aa43875e1a0b 279 SUPERFAMILY SSF53790 15 257 2.88E-76 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS16360 690092d3f22c1fd9c599aa43875e1a0b 279 Gene3D G3DSA:3.40.1010.10 17 133 4.5E-42 T 13-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 19 207 1.0E-104 T 13-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 Pfam PF00574 Clp protease 29 208 3.0E-87 T 13-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 106 117 - T 13-09-2016 IPR018215 ClpP, Ser active site PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 19 209 43.226 T 13-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 PANTHER PTHR10381 3 211 6.6E-138 T 13-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 128 141 - T 13-09-2016 IPR033135 ClpP, histidine active site PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 PANTHER PTHR10381:SF22 3 211 6.6E-138 T 13-09-2016 PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 Gene3D G3DSA:3.90.226.10 19 208 2.1E-89 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 5.8E-52 T 13-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 PRINTS PR00127 Clp protease catalytic subunit P signature 75 95 5.8E-52 T 13-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 PRINTS PR00127 Clp protease catalytic subunit P signature 35 50 5.8E-52 T 13-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 PRINTS PR00127 Clp protease catalytic subunit P signature 106 123 5.8E-52 T 13-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 PRINTS PR00127 Clp protease catalytic subunit P signature 127 146 5.8E-52 T 13-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PMA3_RS08145 44e61838e252d317d61bc8cd14da1e23 211 SUPERFAMILY SSF52096 27 209 2.03E-73 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS17030 93604ae99b198e5a7ca0c63b48cf1dc1 319 SUPERFAMILY SSF103481 57 151 2.35E-8 T 13-09-2016 PMA3_RS17030 93604ae99b198e5a7ca0c63b48cf1dc1 319 PANTHER PTHR22911 14 317 1.3E-29 T 13-09-2016 PMA3_RS17030 93604ae99b198e5a7ca0c63b48cf1dc1 319 Pfam PF00892 EamA-like transporter family 169 305 5.2E-8 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS17030 93604ae99b198e5a7ca0c63b48cf1dc1 319 Pfam PF00892 EamA-like transporter family 18 151 4.0E-10 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS17030 93604ae99b198e5a7ca0c63b48cf1dc1 319 SUPERFAMILY SSF103481 228 308 7.59E-10 T 13-09-2016 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 PANTHER PTHR30046 374 595 1.2E-185 T 13-09-2016 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 PANTHER PTHR30046 27 340 1.2E-185 T 13-09-2016 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 PANTHER PTHR30046:SF0 374 595 1.2E-185 T 13-09-2016 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 PANTHER PTHR30046:SF0 27 340 1.2E-185 T 13-09-2016 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 PIRSF PIRSF004862 23 595 7.1E-136 T 13-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 Pfam PF01514 Secretory protein of YscJ/FliF family 46 237 1.4E-68 T 13-09-2016 IPR006182 Secretory protein YscJ/FliF PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 33 594 3.4E-88 T 13-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 PRINTS PR01009 Flagellar M-ring protein signature 213 231 1.2E-38 T 13-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 PRINTS PR01009 Flagellar M-ring protein signature 170 184 1.2E-38 T 13-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 PRINTS PR01009 Flagellar M-ring protein signature 138 156 1.2E-38 T 13-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 PRINTS PR01009 Flagellar M-ring protein signature 391 415 1.2E-38 T 13-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 PRINTS PR01009 Flagellar M-ring protein signature 283 301 1.2E-38 T 13-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PMA3_RS21730 349b45158da57dc0c668bebdd0904114 595 Pfam PF08345 Flagellar M-ring protein C-terminal 270 468 9.5E-49 T 13-09-2016 IPR013556 Flagellar M-ring C-terminal PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 SMART SM00448 2 116 1.3E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 PANTHER PTHR26402 2 210 3.1E-72 T 13-09-2016 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 Gene3D G3DSA:3.40.50.2300 1 121 5.3E-29 T 13-09-2016 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 2.9E-20 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 4.4E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 4.4E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 4.4E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 SUPERFAMILY SSF46894 145 211 3.13E-17 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 Gene3D G3DSA:1.10.10.10 122 210 1.1E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 PANTHER PTHR26402:SF511 2 210 3.1E-72 T 13-09-2016 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 Pfam PF00072 Response regulator receiver domain 4 117 1.8E-27 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 SMART SM00421 153 210 6.9E-19 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15735 594f1c98aca3837e9f0e906bb9a02af2 221 SUPERFAMILY SSF52172 1 132 3.84E-28 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS02965 5afb48780a2d049091ad7a54ebd98fbd 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 138 1.0E-62 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02965 5afb48780a2d049091ad7a54ebd98fbd 146 PIRSF PIRSF001399 1 145 6.7E-61 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02965 5afb48780a2d049091ad7a54ebd98fbd 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 72.245 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02965 5afb48780a2d049091ad7a54ebd98fbd 146 SUPERFAMILY SSF52304 5 141 8.24E-61 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02965 5afb48780a2d049091ad7a54ebd98fbd 146 Gene3D G3DSA:3.40.50.9100 5 143 1.1E-64 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02965 5afb48780a2d049091ad7a54ebd98fbd 146 Pfam PF01220 Dehydroquinase class II 5 140 3.4E-59 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02965 5afb48780a2d049091ad7a54ebd98fbd 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 139 5.3E-58 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02965 5afb48780a2d049091ad7a54ebd98fbd 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 13-09-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS02965 5afb48780a2d049091ad7a54ebd98fbd 146 PANTHER PTHR21272 1 138 9.0E-85 T 13-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 260 2.1E-4 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 497 521 0.0042 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 SUPERFAMILY SSF52540 5 248 1.55E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 SUPERFAMILY SSF52540 270 517 2.5E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 SMART SM00382 304 495 3.4E-19 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 SMART SM00382 30 229 2.1E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 Gene3D G3DSA:3.40.50.300 4 253 5.6E-73 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 Gene3D G3DSA:3.40.50.300 268 519 6.9E-80 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 ProSitePatterns PS00211 ABC transporters family signature. 418 432 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 PANTHER PTHR24220 7 403 9.0E-179 T 13-09-2016 PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 Pfam PF00005 ABC transporter 296 446 1.0E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 Pfam PF00005 ABC transporter 22 179 2.5E-27 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS12385 e2ef69c2b3a3d3ab10215c116079a04a 526 PANTHER PTHR24220:SF574 7 403 9.0E-179 T 13-09-2016 PMA3_RS09540 f59f19acbe98275e72281b7405b78dc4 551 Pfam PF01740 STAS domain 439 531 1.2E-16 T 13-09-2016 IPR002645 STAS domain PMA3_RS09540 f59f19acbe98275e72281b7405b78dc4 551 Pfam PF00916 Sulfate permease family 21 384 3.5E-86 T 13-09-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PMA3_RS09540 f59f19acbe98275e72281b7405b78dc4 551 SUPERFAMILY SSF52091 432 540 4.91E-20 T 13-09-2016 IPR002645 STAS domain PMA3_RS09540 f59f19acbe98275e72281b7405b78dc4 551 PANTHER PTHR11814 1 540 3.6E-242 T 13-09-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PMA3_RS09540 f59f19acbe98275e72281b7405b78dc4 551 Gene3D G3DSA:3.30.750.24 433 535 1.9E-19 T 13-09-2016 IPR002645 STAS domain PMA3_RS09540 f59f19acbe98275e72281b7405b78dc4 551 PANTHER PTHR11814:SF112 1 540 3.6E-242 T 13-09-2016 PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 SUPERFAMILY SSF51735 11 244 9.8E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 Pfam PF00106 short chain dehydrogenase 15 210 2.7E-45 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 Gene3D G3DSA:3.40.50.720 9 244 1.3E-60 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 PANTHER PTHR24322:SF337 166 198 2.6E-85 T 13-09-2016 PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 PANTHER PTHR24322:SF337 18 150 2.6E-85 T 13-09-2016 PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 PANTHER PTHR24322 166 198 2.6E-85 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 8.5E-20 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 8.5E-20 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 8.5E-20 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 8.5E-20 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 8.5E-20 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS21000 637d16f25a2cd1cb840d5de66697afc3 246 PANTHER PTHR24322 18 150 2.6E-85 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS29290 db208f2fc45094569b97c7d2d573bb43 276 Pfam PF01678 Diaminopimelate epimerase 154 269 5.9E-33 T 13-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29290 db208f2fc45094569b97c7d2d573bb43 276 Pfam PF01678 Diaminopimelate epimerase 5 126 3.1E-30 T 13-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29290 db208f2fc45094569b97c7d2d573bb43 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 3.0E-92 T 13-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29290 db208f2fc45094569b97c7d2d573bb43 276 Gene3D G3DSA:3.10.310.10 3 122 1.3E-48 T 13-09-2016 PMA3_RS29290 db208f2fc45094569b97c7d2d573bb43 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.92 T 13-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29290 db208f2fc45094569b97c7d2d573bb43 276 Gene3D G3DSA:3.10.310.10 123 264 3.8E-52 T 13-09-2016 PMA3_RS29290 db208f2fc45094569b97c7d2d573bb43 276 PANTHER PTHR31689 1 276 8.0E-133 T 13-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29290 db208f2fc45094569b97c7d2d573bb43 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 13-09-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS29290 db208f2fc45094569b97c7d2d573bb43 276 PANTHER PTHR31689:SF0 1 276 8.0E-133 T 13-09-2016 PMA3_RS29290 db208f2fc45094569b97c7d2d573bb43 276 SUPERFAMILY SSF54506 3 276 3.93E-53 T 13-09-2016 PMA3_RS04415 f55a17c26441cfecb6f5fd14c7986063 183 PANTHER PTHR22769 1 180 1.2E-84 T 13-09-2016 PMA3_RS04415 f55a17c26441cfecb6f5fd14c7986063 183 Pfam PF00293 NUDIX domain 40 141 2.9E-14 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS04415 f55a17c26441cfecb6f5fd14c7986063 183 Gene3D G3DSA:3.90.79.10 36 166 2.2E-32 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS04415 f55a17c26441cfecb6f5fd14c7986063 183 PANTHER PTHR22769:SF17 1 180 1.2E-84 T 13-09-2016 PMA3_RS04415 f55a17c26441cfecb6f5fd14c7986063 183 PRINTS PR00502 NUDIX hydrolase family signature 79 94 4.3E-5 T 13-09-2016 IPR020476 NUDIX hydrolase PMA3_RS04415 f55a17c26441cfecb6f5fd14c7986063 183 PRINTS PR00502 NUDIX hydrolase family signature 65 79 4.3E-5 T 13-09-2016 IPR020476 NUDIX hydrolase PMA3_RS04415 f55a17c26441cfecb6f5fd14c7986063 183 SUPERFAMILY SSF55811 2 163 4.6E-39 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS04415 f55a17c26441cfecb6f5fd14c7986063 183 Gene3D G3DSA:2.20.70.10 1 35 1.7E-20 T 13-09-2016 PMA3_RS04415 f55a17c26441cfecb6f5fd14c7986063 183 Pfam PF14803 Nudix N-terminal 2 35 4.3E-18 T 13-09-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- PMA3_RS12625 5f0a5ad7063be0aade0561284ce953ab 795 Gene3D G3DSA:1.10.760.10 718 794 2.1E-4 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12625 5f0a5ad7063be0aade0561284ce953ab 795 SUPERFAMILY SSF46626 546 576 9.13E-10 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12625 5f0a5ad7063be0aade0561284ce953ab 795 SUPERFAMILY SSF46626 776 794 9.13E-10 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12625 5f0a5ad7063be0aade0561284ce953ab 795 SUPERFAMILY SSF46626 450 503 9.13E-10 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12625 5f0a5ad7063be0aade0561284ce953ab 795 Gene3D G3DSA:1.10.760.10 451 493 9.8E-5 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 SMART SM00345 1 52 1.2E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 Pfam PF07729 FCD domain 62 182 6.1E-12 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 Gene3D G3DSA:1.10.10.10 2 54 5.0E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 SMART SM00895 62 184 1.4E-10 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 SUPERFAMILY SSF48008 59 193 6.54E-24 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 12 26 3.0E-6 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 42 3.0E-6 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 Pfam PF00392 Bacterial regulatory proteins, gntR family 1 52 1.0E-13 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 PANTHER PTHR11751 1 78 4.1E-25 T 13-09-2016 PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 SUPERFAMILY SSF46785 2 70 7.81E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18520 d04faf79b1e270c014e96b9efed198c3 199 Gene3D G3DSA:1.20.120.530 55 195 8.7E-35 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS13515 9bdd4e69b97046998542dc767ffcf821 295 Gene3D G3DSA:3.40.50.620 152 295 1.5E-26 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS13515 9bdd4e69b97046998542dc767ffcf821 295 PANTHER PTHR31964 136 295 9.3E-16 T 13-09-2016 PMA3_RS13515 9bdd4e69b97046998542dc767ffcf821 295 SUPERFAMILY SSF52402 168 295 5.72E-23 T 13-09-2016 PMA3_RS13515 9bdd4e69b97046998542dc767ffcf821 295 SUPERFAMILY SSF52402 4 143 1.51E-18 T 13-09-2016 PMA3_RS13515 9bdd4e69b97046998542dc767ffcf821 295 Pfam PF00582 Universal stress protein family 19 143 1.9E-8 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS13515 9bdd4e69b97046998542dc767ffcf821 295 Pfam PF00582 Universal stress protein family 152 295 5.0E-19 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS13515 9bdd4e69b97046998542dc767ffcf821 295 PANTHER PTHR31964:SF26 136 295 9.3E-16 T 13-09-2016 PMA3_RS13515 9bdd4e69b97046998542dc767ffcf821 295 Gene3D G3DSA:3.40.50.620 3 143 2.8E-17 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 5.8E-97 T 13-09-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 205 7.6E-77 T 13-09-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 Hamap MF_01646 Siroheme synthase [cysG]. 1 460 53.943 T 13-09-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 Pfam PF13241 Putative NAD(P)-binding 6 115 6.9E-28 T 13-09-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 Gene3D G3DSA:3.40.1010.10 215 331 1.9E-49 T 13-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 Pfam PF14824 Sirohaem biosynthesis protein central 119 144 1.1E-7 T 13-09-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 SUPERFAMILY SSF53790 215 458 1.2E-86 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 Gene3D G3DSA:3.40.50.720 1 113 7.4E-35 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 SUPERFAMILY SSF51735 1 113 2.15E-27 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 Gene3D G3DSA:1.10.8.210 151 209 2.6E-22 T 13-09-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 13-09-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 PIRSF PIRSF036426 1 463 2.2E-207 T 13-09-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 PANTHER PTHR21091 165 454 3.6E-89 T 13-09-2016 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 Pfam PF10414 Sirohaem synthase dimerisation region 151 205 9.6E-21 T 13-09-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 SUPERFAMILY SSF75615 114 209 3.4E-27 T 13-09-2016 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 3.7E-56 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 PANTHER PTHR21091:SF16 165 454 3.6E-89 T 13-09-2016 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 Gene3D G3DSA:3.30.160.110 114 148 7.9E-19 T 13-09-2016 PMA3_RS19550 5258dd29f342d14054d114dae30e9961 464 Gene3D G3DSA:3.30.950.10 332 458 7.5E-53 T 13-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PMA3_RS24530 4a9a4e5a0b985219ba4f9487e17fddc6 242 SUPERFAMILY SSF56214 23 100 6.54E-14 T 13-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PMA3_RS24530 4a9a4e5a0b985219ba4f9487e17fddc6 242 Gene3D G3DSA:3.90.470.20 24 114 6.9E-18 T 13-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PMA3_RS20540 88791dbab9482b0269c5dad2e8086b9b 513 PANTHER PTHR30618 31 496 5.4E-265 T 13-09-2016 PMA3_RS20540 88791dbab9482b0269c5dad2e8086b9b 513 PANTHER PTHR30618:SF6 31 496 5.4E-265 T 13-09-2016 PMA3_RS20540 88791dbab9482b0269c5dad2e8086b9b 513 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 47 480 3.4E-82 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS14365 33d482ecb0cc6724839022c86620b75d 99 PANTHER PTHR34596 18 93 4.5E-20 T 13-09-2016 PMA3_RS14365 33d482ecb0cc6724839022c86620b75d 99 Pfam PF03573 outer membrane porin, OprD family 4 91 9.3E-18 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS14365 33d482ecb0cc6724839022c86620b75d 99 Gene3D G3DSA:2.40.160.10 28 90 4.1E-15 T 13-09-2016 IPR023614 Porin domain PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PANTHER PTHR32063 1 1024 0.0 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 Gene3D G3DSA:3.30.70.1430 560 650 1.4E-8 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 SUPERFAMILY SSF82714 184 266 5.49E-16 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PANTHER PTHR32063:SF21 1 1024 0.0 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 SUPERFAMILY SSF82693 136 182 1.49E-21 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 SUPERFAMILY SSF82693 268 324 1.49E-21 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 Gene3D G3DSA:3.30.2090.10 184 266 2.0E-17 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 Gene3D G3DSA:3.30.2090.10 709 793 1.1E-18 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 Gene3D G3DSA:1.20.1640.10 285 498 1.1E-58 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 SUPERFAMILY SSF82866 290 490 5.62E-47 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 SUPERFAMILY SSF82866 821 1016 1.2E-42 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 Gene3D G3DSA:1.10.3850.10 799 1016 1.6E-50 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 SUPERFAMILY SSF82693 794 842 9.16E-9 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 SUPERFAMILY SSF82693 668 707 9.16E-9 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 SUPERFAMILY SSF82693 40 133 1.92E-23 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 SUPERFAMILY SSF82714 709 792 3.53E-18 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 8.6E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 8.6E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.6E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 8.6E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 8.6E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 8.6E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.6E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 8.6E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 8.6E-80 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 SUPERFAMILY SSF82693 557 654 7.06E-16 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 Gene3D G3DSA:3.30.70.1430 40 141 2.7E-29 T 13-09-2016 PMA3_RS15020 9440a3b49553331ebed6d6933e6a2d8b 1034 Pfam PF00873 AcrB/AcrD/AcrF family 3 1014 0.0 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS19835 8e386b07642af50ed1f1c27a9e70852c 400 Pfam PF00529 HlyD membrane-fusion protein of T1SS 204 347 2.2E-9 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS19835 8e386b07642af50ed1f1c27a9e70852c 400 SUPERFAMILY SSF111369 62 115 1.7E-7 T 13-09-2016 PMA3_RS19835 8e386b07642af50ed1f1c27a9e70852c 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 293 5.5E-16 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS19835 8e386b07642af50ed1f1c27a9e70852c 400 Gene3D G3DSA:1.20.1600.10 100 186 3.6E-4 T 13-09-2016 PMA3_RS19835 8e386b07642af50ed1f1c27a9e70852c 400 PANTHER PTHR30386:SF6 1 378 6.4E-162 T 13-09-2016 PMA3_RS19835 8e386b07642af50ed1f1c27a9e70852c 400 Gene3D G3DSA:2.40.50.100 63 96 2.0E-16 T 13-09-2016 PMA3_RS19835 8e386b07642af50ed1f1c27a9e70852c 400 Gene3D G3DSA:2.40.50.100 217 250 2.0E-16 T 13-09-2016 PMA3_RS19835 8e386b07642af50ed1f1c27a9e70852c 400 SUPERFAMILY SSF111369 169 269 1.31E-8 T 13-09-2016 PMA3_RS19835 8e386b07642af50ed1f1c27a9e70852c 400 PANTHER PTHR30386 1 378 6.4E-162 T 13-09-2016 PMA3_RS26710 01abc9ac0e668961f8d29f7f5049892b 274 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 2 247 39.16 T 13-09-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 PMA3_RS26710 01abc9ac0e668961f8d29f7f5049892b 274 PIRSF PIRSF018982 2 258 9.8E-109 T 13-09-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 PMA3_RS26710 01abc9ac0e668961f8d29f7f5049892b 274 PANTHER PTHR39330 4 264 7.2E-120 T 13-09-2016 PMA3_RS26710 01abc9ac0e668961f8d29f7f5049892b 274 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 10 247 5.3E-95 T 13-09-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 Gene3D G3DSA:3.40.50.2300 653 770 5.1E-26 T 13-09-2016 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 SMART SM00448 653 767 2.4E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 622 1.0E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 566 1.0E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 580 1.0E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 603 1.0E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 SMART SM00091 269 336 2.4E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 Pfam PF05227 CHASE3 domain 47 178 2.0E-19 T 13-09-2016 IPR007891 CHASE3 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 Pfam PF13426 PAS domain 281 383 8.5E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 Pfam PF00512 His Kinase A (phospho-acceptor) domain 404 468 5.6E-17 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 SMART SM00387 515 625 1.0E-34 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 PANTHER PTHR24423 12 52 8.1E-122 T 13-09-2016 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 PANTHER PTHR24423 267 771 8.1E-122 T 13-09-2016 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 Gene3D G3DSA:3.30.450.20 259 378 1.3E-25 T 13-09-2016 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 Gene3D G3DSA:1.10.287.130 396 454 2.9E-17 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 SMART SM00388 404 468 6.3E-21 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 516 623 2.8E-25 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 Pfam PF00072 Response regulator receiver domain 655 766 1.7E-18 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 SUPERFAMILY SSF52172 654 771 3.27E-26 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 SUPERFAMILY SSF55785 259 382 1.17E-24 T 13-09-2016 IPR000014 PAS domain PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 SUPERFAMILY SSF55874 457 625 9.3E-42 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 Gene3D G3DSA:3.30.565.10 455 624 1.6E-42 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 SUPERFAMILY SSF47384 389 469 1.51E-20 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS11960 be97cc599f83f311ffc1e89b9f880f9c 775 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 390 8.8E-22 T 13-09-2016 IPR000014 PAS domain PMA3_RS16215 49fd52452650e10b2c7c8c07febbbcc9 224 SMART SM00100 16 135 7.1E-18 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS16215 49fd52452650e10b2c7c8c07febbbcc9 224 PANTHER PTHR24567:SF30 1 222 6.3E-37 T 13-09-2016 PMA3_RS16215 49fd52452650e10b2c7c8c07febbbcc9 224 SMART SM00419 168 216 2.9E-10 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS16215 49fd52452650e10b2c7c8c07febbbcc9 224 Pfam PF00027 Cyclic nucleotide-binding domain 36 121 4.7E-17 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS16215 49fd52452650e10b2c7c8c07febbbcc9 224 PANTHER PTHR24567 1 222 6.3E-37 T 13-09-2016 PMA3_RS16215 49fd52452650e10b2c7c8c07febbbcc9 224 SUPERFAMILY SSF46785 151 220 3.18E-10 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16215 49fd52452650e10b2c7c8c07febbbcc9 224 Gene3D G3DSA:1.10.10.10 153 222 1.6E-10 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16215 49fd52452650e10b2c7c8c07febbbcc9 224 SUPERFAMILY SSF51206 11 148 1.44E-29 T 13-09-2016 IPR018490 Cyclic nucleotide-binding-like PMA3_RS16215 49fd52452650e10b2c7c8c07febbbcc9 224 Gene3D G3DSA:2.60.120.10 11 149 7.9E-32 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS16215 49fd52452650e10b2c7c8c07febbbcc9 224 Pfam PF13545 Crp-like helix-turn-helix domain 156 222 1.6E-11 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 SMART SM00369 1168 1191 21.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 SMART SM00369 1145 1167 4.8 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 SMART SM00369 1217 1239 380.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 SMART SM00369 1240 1263 0.011 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 PANTHER PTHR23155 1145 1278 7.8E-20 T 13-09-2016 PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 PANTHER PTHR23155 1608 1613 7.8E-20 T 13-09-2016 PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 Gene3D G3DSA:1.20.1270.130 1331 1394 5.3E-9 T 13-09-2016 PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 SUPERFAMILY SSF52058 1101 1264 4.76E-27 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 1321 1543 1.4E-40 T 13-09-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 Pfam PF12799 Leucine Rich repeats (2 copies) 1146 1184 4.7E-8 T 13-09-2016 IPR025875 Leucine rich repeat 4 PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 Gene3D G3DSA:1.20.58.360 1404 1539 1.3E-24 T 13-09-2016 PMA3_RS12210 04efdc89699f536cc83d4c71a938b1b3 1618 Gene3D G3DSA:3.80.10.10 1097 1263 4.6E-30 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS14975 2415c30bc2f61b9cf091dc679abac047 664 PANTHER PTHR10357 16 149 9.1E-260 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14975 2415c30bc2f61b9cf091dc679abac047 664 Pfam PF11896 Domain of unknown function (DUF3416) 25 206 1.1E-50 T 13-09-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 PMA3_RS14975 2415c30bc2f61b9cf091dc679abac047 664 PANTHER PTHR10357:SF137 16 149 9.1E-260 T 13-09-2016 PMA3_RS14975 2415c30bc2f61b9cf091dc679abac047 664 Pfam PF00128 Alpha amylase, catalytic domain 230 343 2.1E-7 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14975 2415c30bc2f61b9cf091dc679abac047 664 SMART SM00642 216 561 1.7E-5 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14975 2415c30bc2f61b9cf091dc679abac047 664 Gene3D G3DSA:3.20.20.80 210 566 4.3E-73 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14975 2415c30bc2f61b9cf091dc679abac047 664 PANTHER PTHR10357:SF137 179 660 9.1E-260 T 13-09-2016 PMA3_RS14975 2415c30bc2f61b9cf091dc679abac047 664 PANTHER PTHR10357 179 660 9.1E-260 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14975 2415c30bc2f61b9cf091dc679abac047 664 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 22 664 45.789 T 13-09-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 PMA3_RS14975 2415c30bc2f61b9cf091dc679abac047 664 SUPERFAMILY SSF51445 178 568 7.65E-90 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS29435 b3d9d1ba8104b45fe7e41a9876f592d9 437 Pfam PF01266 FAD dependent oxidoreductase 39 392 3.6E-52 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS29435 b3d9d1ba8104b45fe7e41a9876f592d9 437 Gene3D G3DSA:3.50.50.60 27 128 6.7E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29435 b3d9d1ba8104b45fe7e41a9876f592d9 437 Gene3D G3DSA:3.50.50.60 354 399 6.7E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29435 b3d9d1ba8104b45fe7e41a9876f592d9 437 Gene3D G3DSA:3.50.50.60 182 261 6.7E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29435 b3d9d1ba8104b45fe7e41a9876f592d9 437 PANTHER PTHR13847 1 437 6.0E-159 T 13-09-2016 PMA3_RS29435 b3d9d1ba8104b45fe7e41a9876f592d9 437 PANTHER PTHR13847:SF196 1 437 6.0E-159 T 13-09-2016 PMA3_RS29435 b3d9d1ba8104b45fe7e41a9876f592d9 437 SUPERFAMILY SSF51905 354 420 6.47E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29435 b3d9d1ba8104b45fe7e41a9876f592d9 437 SUPERFAMILY SSF51905 39 262 6.47E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02415 72bccd58d2e2b0ca91610a136a6cee42 232 Gene3D G3DSA:3.40.50.300 1 221 4.2E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02415 72bccd58d2e2b0ca91610a136a6cee42 232 SMART SM00382 26 211 1.5E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS02415 72bccd58d2e2b0ca91610a136a6cee42 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 2.1E-105 T 13-09-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE PMA3_RS02415 72bccd58d2e2b0ca91610a136a6cee42 232 SUPERFAMILY SSF52540 2 221 8.31E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02415 72bccd58d2e2b0ca91610a136a6cee42 232 PANTHER PTHR24220:SF404 3 232 2.1E-135 T 13-09-2016 PMA3_RS02415 72bccd58d2e2b0ca91610a136a6cee42 232 PANTHER PTHR24220 3 232 2.1E-135 T 13-09-2016 PMA3_RS02415 72bccd58d2e2b0ca91610a136a6cee42 232 Pfam PF00005 ABC transporter 17 161 1.8E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 287 4.0E-97 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 PIRSF PIRSF036480 5 288 8.2E-105 T 13-09-2016 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 PANTHER PTHR10520 4 281 8.1E-136 T 13-09-2016 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 Gene3D G3DSA:3.30.70.260 5 85 3.9E-18 T 13-09-2016 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 SUPERFAMILY SSF53328 93 287 1.83E-58 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 2.0E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 115 142 2.0E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 2.0E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 2.0E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 93 115 2.0E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 2.0E-47 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 Pfam PF00551 Formyl transferase 93 268 5.0E-33 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 PANTHER PTHR10520:SF7 4 281 8.1E-136 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 Gene3D G3DSA:3.40.50.170 93 286 3.4E-52 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 SUPERFAMILY SSF55021 6 86 3.66E-13 T 13-09-2016 PMA3_RS11140 21de7cae554f0bd3118e98e7017a7e7c 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 287 44.952 T 13-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 PANTHER PTHR10000 181 401 7.6E-90 T 13-09-2016 PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 Pfam PF13740 ACT domain 3 79 2.6E-25 T 13-09-2016 PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 Pfam PF12710 haloacid dehalogenase-like hydrolase 193 360 1.7E-24 T 13-09-2016 PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 Gene3D G3DSA:1.10.150.210 202 252 2.0E-25 T 13-09-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 SUPERFAMILY SSF55021 3 83 1.62E-14 T 13-09-2016 PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 SUPERFAMILY SSF56784 191 396 4.6E-52 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 177 395 6.1E-80 T 13-09-2016 PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 PANTHER PTHR10000:SF7 181 401 7.6E-90 T 13-09-2016 PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 192 362 2.3E-33 T 13-09-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 Gene3D G3DSA:3.40.50.1000 253 382 4.1E-42 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 Gene3D G3DSA:3.30.70.260 4 87 3.7E-17 T 13-09-2016 PMA3_RS01975 52f5a8d3a9575c364118d90552cdfe41 404 Gene3D G3DSA:3.30.70.260 113 192 1.5E-11 T 13-09-2016 PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 1.9E-63 T 13-09-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 Pfam PF01467 Cytidylyltransferase-like 344 434 2.1E-15 T 13-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 SUPERFAMILY SSF52374 340 470 1.86E-25 T 13-09-2016 PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 Pfam PF00294 pfkB family carbohydrate kinase 13 304 9.0E-45 T 13-09-2016 IPR011611 Carbohydrate kinase PfkB PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 Gene3D G3DSA:3.40.1190.20 12 313 9.3E-65 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 5.0E-124 T 13-09-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 PANTHER PTHR10584:SF159 1 339 1.2E-142 T 13-09-2016 PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 SUPERFAMILY SSF53613 12 309 2.34E-59 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 341 407 1.1E-16 T 13-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 Gene3D G3DSA:3.40.50.620 339 456 4.1E-34 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 PANTHER PTHR10584 1 339 1.2E-142 T 13-09-2016 PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 13-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PMA3_RS01870 1f3379ed37d8b99e433d5393c68ad151 474 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 473 42.762 T 13-09-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 SMART SM00421 199 256 6.1E-19 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 Gene3D G3DSA:1.10.10.10 201 258 9.4E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 216 7.3E-12 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 232 7.3E-12 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 232 244 7.3E-12 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 SUPERFAMILY SSF46894 187 258 9.18E-19 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 ProSitePatterns PS00622 LuxR-type HTH domain signature. 216 243 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 PANTHER PTHR26402 173 258 2.8E-35 T 13-09-2016 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 PANTHER PTHR26402:SF572 173 258 2.8E-35 T 13-09-2016 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 Pfam PF00196 Bacterial regulatory proteins, luxR family 201 254 3.0E-18 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 PANTHER PTHR26402 9 138 2.8E-35 T 13-09-2016 PMA3_RS19070 fdbad58733eece65d9c600a9c7cdd2b4 261 PANTHER PTHR26402:SF572 9 138 2.8E-35 T 13-09-2016 PMA3_RS27110 426b0fb6b7463fc16d7ece37aced135e 734 PANTHER PTHR39624 11 142 6.6E-17 T 13-09-2016 PMA3_RS27110 426b0fb6b7463fc16d7ece37aced135e 734 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 1.5E-69 T 13-09-2016 IPR003776 YcaO-like domain PMA3_RS27110 426b0fb6b7463fc16d7ece37aced135e 734 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 727 0.0 T 13-09-2016 IPR019938 YcaO domain protein PMA3_RS27110 426b0fb6b7463fc16d7ece37aced135e 734 Gene3D G3DSA:3.30.300.20 1 127 1.1E-29 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS27110 426b0fb6b7463fc16d7ece37aced135e 734 SUPERFAMILY SSF82784 1 127 1.09E-19 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS27110 426b0fb6b7463fc16d7ece37aced135e 734 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 2.2E-95 T 13-09-2016 IPR003776 YcaO-like domain PMA3_RS27110 426b0fb6b7463fc16d7ece37aced135e 734 Pfam PF02566 OsmC-like protein 32 126 5.4E-9 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS22145 4478ed504f4227d89a258f0945213d6c 307 SUPERFAMILY SSF53850 93 292 5.89E-30 T 13-09-2016 PMA3_RS22145 4478ed504f4227d89a258f0945213d6c 307 Pfam PF03466 LysR substrate binding domain 92 290 3.8E-28 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS22145 4478ed504f4227d89a258f0945213d6c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.5E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS22145 4478ed504f4227d89a258f0945213d6c 307 SUPERFAMILY SSF46785 5 103 2.59E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22145 4478ed504f4227d89a258f0945213d6c 307 PANTHER PTHR30126:SF19 5 307 5.5E-153 T 13-09-2016 PMA3_RS22145 4478ed504f4227d89a258f0945213d6c 307 Gene3D G3DSA:3.40.190.10 172 257 1.1E-9 T 13-09-2016 PMA3_RS22145 4478ed504f4227d89a258f0945213d6c 307 Gene3D G3DSA:1.10.10.10 7 91 5.0E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22145 4478ed504f4227d89a258f0945213d6c 307 PANTHER PTHR30126 5 307 5.5E-153 T 13-09-2016 PMA3_RS22145 4478ed504f4227d89a258f0945213d6c 307 Gene3D G3DSA:3.40.190.10 93 171 9.7E-9 T 13-09-2016 PMA3_RS00315 e39699d6253f0e307319942a51d68ff8 309 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 10 264 4.1E-18 T 13-09-2016 IPR025859 P-aminobenzoate N-oxygenase AurF PMA3_RS03955 21d7ba9d76f803ea56587a59b58cabdd 272 Pfam PF13672 Protein phosphatase 2C 19 217 2.0E-42 T 13-09-2016 PMA3_RS03955 21d7ba9d76f803ea56587a59b58cabdd 272 Gene3D G3DSA:3.60.40.10 26 156 1.1E-7 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS03955 21d7ba9d76f803ea56587a59b58cabdd 272 SUPERFAMILY SSF81606 18 194 2.49E-10 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 SUPERFAMILY SSF51230 5 93 5.89E-22 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 Pfam PF00364 Biotin-requiring enzyme 118 188 4.6E-22 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 Pfam PF00364 Biotin-requiring enzyme 5 74 5.8E-21 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 Pfam PF00364 Biotin-requiring enzyme 230 301 1.4E-22 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 Gene3D G3DSA:3.30.559.10 416 653 1.5E-80 T 13-09-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 SUPERFAMILY SSF47005 344 389 1.44E-11 T 13-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 424 652 3.4E-76 T 13-09-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 211 653 1.1E-204 T 13-09-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 13-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 PANTHER PTHR23151:SF68 407 653 1.8E-241 T 13-09-2016 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 SUPERFAMILY SSF52777 412 653 2.71E-79 T 13-09-2016 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 Gene3D G3DSA:4.10.320.10 346 395 6.2E-19 T 13-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 PANTHER PTHR23151:SF68 347 391 1.8E-241 T 13-09-2016 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 252 281 - T 13-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 Gene3D G3DSA:2.40.50.100 230 305 1.0E-21 T 13-09-2016 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 Gene3D G3DSA:2.40.50.100 5 78 5.0E-23 T 13-09-2016 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 Gene3D G3DSA:2.40.50.100 118 193 4.2E-22 T 13-09-2016 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 140 169 - T 13-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 PANTHER PTHR23151:SF68 21 244 1.8E-241 T 13-09-2016 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 SUPERFAMILY SSF51230 228 320 8.51E-22 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 PANTHER PTHR23151 21 244 1.8E-241 T 13-09-2016 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 PANTHER PTHR23151 347 391 1.8E-241 T 13-09-2016 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 SUPERFAMILY SSF51230 116 209 9.29E-23 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 Pfam PF02817 e3 binding domain 350 385 9.1E-14 T 13-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PMA3_RS01765 144627b70282babc08e9f4f691357ed3 653 PANTHER PTHR23151 407 653 1.8E-241 T 13-09-2016 PMA3_RS13675 04a87fcc2a35ee0139c0188d4236a63a 271 SMART SM00342 173 258 1.5E-18 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS13675 04a87fcc2a35ee0139c0188d4236a63a 271 Pfam PF12680 SnoaL-like domain 20 118 3.8E-11 T 13-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain PMA3_RS13675 04a87fcc2a35ee0139c0188d4236a63a 271 Gene3D G3DSA:1.10.10.60 211 262 2.2E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13675 04a87fcc2a35ee0139c0188d4236a63a 271 Gene3D G3DSA:3.10.450.50 11 123 5.3E-16 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS13675 04a87fcc2a35ee0139c0188d4236a63a 271 PANTHER PTHR11019 146 266 8.0E-18 T 13-09-2016 PMA3_RS13675 04a87fcc2a35ee0139c0188d4236a63a 271 Pfam PF12833 Helix-turn-helix domain 180 259 2.7E-18 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS13675 04a87fcc2a35ee0139c0188d4236a63a 271 Gene3D G3DSA:1.10.10.60 171 210 2.6E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13675 04a87fcc2a35ee0139c0188d4236a63a 271 SUPERFAMILY SSF54427 12 125 2.04E-19 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS13675 04a87fcc2a35ee0139c0188d4236a63a 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 254 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS13675 04a87fcc2a35ee0139c0188d4236a63a 271 SUPERFAMILY SSF46689 222 261 3.14E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17100 77d88c0462210f7a1d9d1f147e2234dd 560 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 127 137 - T 13-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS17100 77d88c0462210f7a1d9d1f147e2234dd 560 SUPERFAMILY SSF143975 4 377 1.44E-128 T 13-09-2016 PMA3_RS17100 77d88c0462210f7a1d9d1f147e2234dd 560 Pfam PF00920 Dehydratase family 39 554 7.6E-209 T 13-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS17100 77d88c0462210f7a1d9d1f147e2234dd 560 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 9 557 44.533 T 13-09-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS17100 77d88c0462210f7a1d9d1f147e2234dd 560 SUPERFAMILY SSF52016 380 557 4.32E-60 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS17100 77d88c0462210f7a1d9d1f147e2234dd 560 PANTHER PTHR21000 1 557 0.0 T 13-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS17100 77d88c0462210f7a1d9d1f147e2234dd 560 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 13-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS17100 77d88c0462210f7a1d9d1f147e2234dd 560 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 23 557 9.1E-224 T 13-09-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS17100 77d88c0462210f7a1d9d1f147e2234dd 560 PANTHER PTHR21000:SF5 1 557 0.0 T 13-09-2016 PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 13-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 13-09-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 Gene3D G3DSA:3.40.50.720 119 297 2.5E-62 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 327 1.1E-27 T 13-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 3.3E-58 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 Gene3D G3DSA:3.40.50.720 5 118 6.4E-29 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 SUPERFAMILY SSF52283 2 134 1.15E-35 T 13-09-2016 PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 SUPERFAMILY SSF51735 102 298 2.02E-58 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 PANTHER PTHR10996:SF161 1 327 3.9E-158 T 13-09-2016 PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 PANTHER PTHR10996 1 327 3.9E-158 T 13-09-2016 PMA3_RS05920 498fc9170157f982cfeedda34bf54be7 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 13-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 PANTHER PTHR13789 3 400 1.1E-146 T 13-09-2016 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 396 1.2E-139 T 13-09-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 PANTHER PTHR13789:SF5 3 400 1.1E-146 T 13-09-2016 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 Gene3D G3DSA:3.50.50.60 274 362 1.3E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 Gene3D G3DSA:3.50.50.60 5 184 1.3E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 Pfam PF01494 FAD binding domain 5 351 5.2E-30 T 13-09-2016 IPR002938 FAD-binding domain GO:0071949 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 7.2E-18 T 13-09-2016 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 7.2E-18 T 13-09-2016 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 7.2E-18 T 13-09-2016 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 7.2E-18 T 13-09-2016 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 SUPERFAMILY SSF51905 273 390 5.68E-63 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 SUPERFAMILY SSF51905 6 179 5.68E-63 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29025 10f1024f8e969a8da98d6074229eb5ce 407 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 300 313 - T 13-09-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 PMA3_RS15640 5e1a216ff7c0cc63efd2c6a1d5382bcd 387 PANTHER PTHR11496:SF79 12 386 2.7E-140 T 13-09-2016 PMA3_RS15640 5e1a216ff7c0cc63efd2c6a1d5382bcd 387 Gene3D G3DSA:3.40.50.1970 12 187 4.6E-57 T 13-09-2016 PMA3_RS15640 5e1a216ff7c0cc63efd2c6a1d5382bcd 387 SUPERFAMILY SSF56796 11 384 3.66E-119 T 13-09-2016 PMA3_RS15640 5e1a216ff7c0cc63efd2c6a1d5382bcd 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 13-09-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PMA3_RS15640 5e1a216ff7c0cc63efd2c6a1d5382bcd 387 PANTHER PTHR11496 12 386 2.7E-140 T 13-09-2016 PMA3_RS15640 5e1a216ff7c0cc63efd2c6a1d5382bcd 387 Gene3D G3DSA:1.20.1090.10 189 386 1.7E-60 T 13-09-2016 PMA3_RS15640 5e1a216ff7c0cc63efd2c6a1d5382bcd 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 15 379 1.4E-114 T 13-09-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PMA3_RS16435 71de79f57d77ac6f50312b3ecef909e0 308 SUPERFAMILY SSF46785 12 112 1.16E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16435 71de79f57d77ac6f50312b3ecef909e0 308 SUPERFAMILY SSF53850 99 305 3.83E-30 T 13-09-2016 PMA3_RS16435 71de79f57d77ac6f50312b3ecef909e0 308 Gene3D G3DSA:3.40.190.10 188 259 5.3E-10 T 13-09-2016 PMA3_RS16435 71de79f57d77ac6f50312b3ecef909e0 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 1.1E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16435 71de79f57d77ac6f50312b3ecef909e0 308 Pfam PF03466 LysR substrate binding domain 99 304 4.1E-26 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS16435 71de79f57d77ac6f50312b3ecef909e0 308 Gene3D G3DSA:1.10.10.10 13 93 3.3E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16435 71de79f57d77ac6f50312b3ecef909e0 308 PANTHER PTHR30126:SF3 11 303 1.5E-61 T 13-09-2016 PMA3_RS16435 71de79f57d77ac6f50312b3ecef909e0 308 Gene3D G3DSA:3.40.190.10 99 187 3.2E-12 T 13-09-2016 PMA3_RS16435 71de79f57d77ac6f50312b3ecef909e0 308 PANTHER PTHR30126 11 303 1.5E-61 T 13-09-2016 PMA3_RS12645 3a7cb513098ea29cf3fe3fde1126a6d2 252 PANTHER PTHR24220:SF358 9 250 5.8E-88 T 13-09-2016 PMA3_RS12645 3a7cb513098ea29cf3fe3fde1126a6d2 252 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS12645 3a7cb513098ea29cf3fe3fde1126a6d2 252 PANTHER PTHR24220 9 250 5.8E-88 T 13-09-2016 PMA3_RS12645 3a7cb513098ea29cf3fe3fde1126a6d2 252 Gene3D G3DSA:3.40.50.300 4 247 1.4E-61 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12645 3a7cb513098ea29cf3fe3fde1126a6d2 252 SMART SM00382 32 235 5.5E-4 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS12645 3a7cb513098ea29cf3fe3fde1126a6d2 252 SUPERFAMILY SSF52540 6 244 9.21E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12645 3a7cb513098ea29cf3fe3fde1126a6d2 252 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 249 1.3E-7 T 13-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PMA3_RS12645 3a7cb513098ea29cf3fe3fde1126a6d2 252 Pfam PF00005 ABC transporter 24 180 8.9E-28 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS29165 4461201593a3646f4fdf7026d56b3d5d 222 PIRSF PIRSF006320 2 217 1.6E-107 T 13-09-2016 IPR026041 Enhancing lycopene biosynthesis protein 2 PMA3_RS29165 4461201593a3646f4fdf7026d56b3d5d 222 Gene3D G3DSA:3.40.50.880 1 221 1.1E-103 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS29165 4461201593a3646f4fdf7026d56b3d5d 222 SUPERFAMILY SSF52317 3 217 1.83E-63 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS29165 4461201593a3646f4fdf7026d56b3d5d 222 PANTHER PTHR10224 1 221 1.1E-128 T 13-09-2016 PMA3_RS29165 4461201593a3646f4fdf7026d56b3d5d 222 Pfam PF01965 DJ-1/PfpI family 15 183 1.2E-7 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 PANTHER PTHR32305:SF7 30 830 1.8E-128 T 13-09-2016 PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 SUPERFAMILY SSF69279 15 196 2.17E-44 T 13-09-2016 PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 Pfam PF05954 Phage late control gene D protein (GPD) 33 358 2.9E-55 T 13-09-2016 PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 16 523 1.5E-70 T 13-09-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 496 599 7.2E-37 T 13-09-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 522 2.0E-121 T 13-09-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 616 757 1.2E-46 T 13-09-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 Gene3D G3DSA:3.55.50.10 115 208 1.5E-27 T 13-09-2016 PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 SUPERFAMILY SSF69255 386 476 3.4E-25 T 13-09-2016 PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 SUPERFAMILY SSF69279 206 387 6.12E-42 T 13-09-2016 PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 PANTHER PTHR32305 30 830 1.8E-128 T 13-09-2016 PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 Gene3D G3DSA:2.40.50.230 394 475 3.5E-24 T 13-09-2016 IPR006531 Gp5 N-terminal PMA3_RS08365 c39eca7d9d836d987dd695bf7e8398f4 1139 Gene3D G3DSA:4.10.180.10 302 317 6.7E-5 T 13-09-2016 IPR027440 Capsid protein alpha-like domain PMA3_RS21305 693bc6fe7ba3c7118d4da8ba4b59e010 533 PANTHER PTHR16631 52 335 5.3E-81 T 13-09-2016 PMA3_RS21305 693bc6fe7ba3c7118d4da8ba4b59e010 533 Gene3D G3DSA:3.20.20.80 84 322 2.7E-27 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS21305 693bc6fe7ba3c7118d4da8ba4b59e010 533 PANTHER PTHR16631:SF5 52 335 5.3E-81 T 13-09-2016 PMA3_RS21305 693bc6fe7ba3c7118d4da8ba4b59e010 533 SUPERFAMILY SSF51445 53 322 6.86E-50 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS08940 961657d9793c0d26cef6e414fdb094d6 179 Gene3D G3DSA:1.10.10.60 1 48 6.6E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS08940 961657d9793c0d26cef6e414fdb094d6 179 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.5E-5 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS08940 961657d9793c0d26cef6e414fdb094d6 179 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.5E-5 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS08940 961657d9793c0d26cef6e414fdb094d6 179 PANTHER PTHR30328:SF22 7 179 8.6E-84 T 13-09-2016 PMA3_RS08940 961657d9793c0d26cef6e414fdb094d6 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.0E-9 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS08940 961657d9793c0d26cef6e414fdb094d6 179 SUPERFAMILY SSF48498 78 177 8.9E-23 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS08940 961657d9793c0d26cef6e414fdb094d6 179 Gene3D G3DSA:1.10.357.10 49 178 4.6E-37 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS08940 961657d9793c0d26cef6e414fdb094d6 179 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 13-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PMA3_RS08940 961657d9793c0d26cef6e414fdb094d6 179 SUPERFAMILY SSF46689 1 70 5.64E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS08940 961657d9793c0d26cef6e414fdb094d6 179 PANTHER PTHR30328 7 179 8.6E-84 T 13-09-2016 PMA3_RS30125 904b1204869b67202b80542654d6ef78 259 Gene3D G3DSA:3.40.1130.10 66 216 8.0E-20 T 13-09-2016 PMA3_RS30125 904b1204869b67202b80542654d6ef78 259 Pfam PF01553 Acyltransferase 64 187 3.8E-22 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS30125 904b1204869b67202b80542654d6ef78 259 SUPERFAMILY SSF69593 9 232 1.96E-37 T 13-09-2016 PMA3_RS30125 904b1204869b67202b80542654d6ef78 259 SMART SM00563 76 190 1.1E-28 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS30125 904b1204869b67202b80542654d6ef78 259 PANTHER PTHR10434 1 241 6.3E-53 T 13-09-2016 PMA3_RS30125 904b1204869b67202b80542654d6ef78 259 PANTHER PTHR10434:SF11 1 241 6.3E-53 T 13-09-2016 PMA3_RS27795 0488b2eedd00d65c4c88aca768a29377 244 PANTHER PTHR11907 21 244 2.0E-55 T 13-09-2016 PMA3_RS27795 0488b2eedd00d65c4c88aca768a29377 244 PANTHER PTHR11907:SF9 21 244 2.0E-55 T 13-09-2016 PMA3_RS27795 0488b2eedd00d65c4c88aca768a29377 244 SUPERFAMILY SSF53271 49 239 3.54E-32 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS27795 0488b2eedd00d65c4c88aca768a29377 244 Gene3D G3DSA:3.40.50.2020 63 241 1.1E-30 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS10405 d18e0abc19f39f008e680bb1672a1e8d 352 SUPERFAMILY SSF46689 282 330 1.21E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10405 d18e0abc19f39f008e680bb1672a1e8d 352 SMART SM00342 246 328 2.0E-19 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10405 d18e0abc19f39f008e680bb1672a1e8d 352 Pfam PF12833 Helix-turn-helix domain 253 329 3.2E-14 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10405 d18e0abc19f39f008e680bb1672a1e8d 352 PANTHER PTHR11019:SF46 233 336 1.3E-18 T 13-09-2016 PMA3_RS10405 d18e0abc19f39f008e680bb1672a1e8d 352 PANTHER PTHR11019 233 336 1.3E-18 T 13-09-2016 PMA3_RS10405 d18e0abc19f39f008e680bb1672a1e8d 352 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 202 2.8E-46 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS10405 d18e0abc19f39f008e680bb1672a1e8d 352 Gene3D G3DSA:1.10.10.60 288 335 7.9E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 SUPERFAMILY SSF55874 676 794 7.33E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 SUPERFAMILY SSF53850 41 266 3.26E-29 T 13-09-2016 PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 SMART SM00062 45 266 2.9E-12 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 SUPERFAMILY SSF55785 339 449 1.7E-22 T 13-09-2016 IPR000014 PAS domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 Pfam PF07730 Histidine kinase 600 666 5.2E-13 T 13-09-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 SMART SM00091 452 525 8.9 T 13-09-2016 IPR000014 PAS domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 SMART SM00091 327 393 0.075 T 13-09-2016 IPR000014 PAS domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 Gene3D G3DSA:3.30.565.10 667 796 2.9E-13 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 SUPERFAMILY SSF55785 437 570 1.82E-18 T 13-09-2016 IPR000014 PAS domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 Pfam PF13426 PAS domain 339 439 5.2E-10 T 13-09-2016 IPR000014 PAS domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 SMART SM00387 704 797 4.6E-10 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 264 1.3E-21 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 705 795 2.4E-8 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 PANTHER PTHR24423 308 798 4.5E-39 T 13-09-2016 PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 Gene3D G3DSA:3.30.450.20 317 437 7.0E-18 T 13-09-2016 PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 Gene3D G3DSA:3.30.450.20 438 570 1.7E-19 T 13-09-2016 PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 332 446 2.0E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 476 579 2.9E-8 T 13-09-2016 IPR000014 PAS domain PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 Pfam PF08447 PAS fold 480 560 3.3E-12 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 Gene3D G3DSA:3.40.190.10 42 131 1.5E-15 T 13-09-2016 PMA3_RS27525 433efbaaa9b559dc97425e636f71abe5 798 Gene3D G3DSA:3.40.190.10 226 266 1.5E-15 T 13-09-2016 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 Pfam PF00750 tRNA synthetases class I (R) 101 448 2.9E-127 T 13-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 SMART SM01016 3 91 9.9E-38 T 13-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 578 26.603 T 13-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 305 326 5.1E-26 T 13-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 150 5.1E-26 T 13-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 134 5.1E-26 T 13-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 158 171 5.1E-26 T 13-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 127 138 - T 13-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 PANTHER PTHR11956:SF1 1 578 9.1E-255 T 13-09-2016 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 90 5.5E-25 T 13-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 SMART SM00836 462 578 7.6E-37 T 13-09-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 Pfam PF05746 DALR anticodon binding domain 462 578 7.9E-32 T 13-09-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 Gene3D G3DSA:3.40.50.620 116 455 5.0E-111 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 SUPERFAMILY SSF52374 118 455 2.93E-91 T 13-09-2016 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 Gene3D G3DSA:3.30.1360.70 2 107 1.0E-31 T 13-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 PANTHER PTHR11956 1 578 9.1E-255 T 13-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 Gene3D G3DSA:1.10.730.10 456 578 2.8E-34 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 578 5.7E-168 T 13-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 SUPERFAMILY SSF55190 2 103 2.22E-23 T 13-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PMA3_RS01450 641baa024b099b296a23d7f2c1ec73ea 578 SUPERFAMILY SSF47323 456 578 1.63E-34 T 13-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 13-09-2016 IPR018181 Heat shock protein 70, conserved site PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 SUPERFAMILY SSF100920 384 539 3.53E-58 T 13-09-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 Gene3D G3DSA:1.20.1270.10 532 603 6.4E-28 T 13-09-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 SUPERFAMILY SSF53067 187 382 1.1E-67 T 13-09-2016 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 Gene3D G3DSA:3.30.30.30 53 108 3.4E-28 T 13-09-2016 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 Pfam PF00012 Hsp70 protein 4 603 4.5E-258 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-09-2016 IPR018181 Heat shock protein 70, conserved site PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 Gene3D G3DSA:3.30.420.40 119 192 2.6E-64 T 13-09-2016 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 Gene3D G3DSA:3.30.420.40 4 52 2.6E-64 T 13-09-2016 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 Gene3D G3DSA:2.60.34.10 390 531 8.4E-69 T 13-09-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 Gene3D G3DSA:3.30.420.40 193 229 2.1E-32 T 13-09-2016 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 Gene3D G3DSA:3.30.420.40 319 360 2.1E-32 T 13-09-2016 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 36.347 T 13-09-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PRINTS PR00301 70kDa heat shock protein signature 198 208 1.4E-79 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.4E-79 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.4E-79 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.4E-79 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.4E-79 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.4E-79 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.4E-79 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.4E-79 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.4E-79 T 13-09-2016 IPR013126 Heat shock protein 70 family PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 4.6E-286 T 13-09-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 Gene3D G3DSA:3.90.640.10 230 315 3.0E-30 T 13-09-2016 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 SUPERFAMILY SSF100934 507 603 3.4E-24 T 13-09-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PANTHER PTHR19375:SF173 2 638 0.0 T 13-09-2016 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 SUPERFAMILY SSF53067 4 183 6.73E-66 T 13-09-2016 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 PANTHER PTHR19375 2 638 0.0 T 13-09-2016 PMA3_RS25580 baf00a6ca9efd4fc8d93e1a1a1a53eaa 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 13-09-2016 IPR018181 Heat shock protein 70, conserved site PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 PANTHER PTHR26402 2 205 1.2E-93 T 13-09-2016 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 Pfam PF00072 Response regulator receiver domain 4 116 1.3E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 SUPERFAMILY SSF52172 1 132 1.2E-33 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 Gene3D G3DSA:1.10.10.10 121 209 7.6E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 SMART SM00448 2 115 1.2E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 8.8E-19 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 PANTHER PTHR26402:SF598 2 205 1.2E-93 T 13-09-2016 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 Gene3D G3DSA:3.40.50.2300 1 120 7.8E-36 T 13-09-2016 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 SUPERFAMILY SSF46894 138 209 2.62E-18 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS27520 75e58dc98c4bb431e887817856d6dfc3 209 SMART SM00421 146 203 1.3E-18 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19055 a0c7a0c47abebc6693a7232beba01325 373 PANTHER PTHR36512 4 366 2.1E-150 T 13-09-2016 PMA3_RS19055 a0c7a0c47abebc6693a7232beba01325 373 PANTHER PTHR36512:SF1 4 366 2.1E-150 T 13-09-2016 PMA3_RS19055 a0c7a0c47abebc6693a7232beba01325 373 Pfam PF03576 Peptidase family S58 21 348 1.6E-108 T 13-09-2016 IPR005321 Peptidase S58, DmpA PMA3_RS19055 a0c7a0c47abebc6693a7232beba01325 373 SUPERFAMILY SSF56266 2 366 7.59E-113 T 13-09-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PMA3_RS19055 a0c7a0c47abebc6693a7232beba01325 373 Gene3D G3DSA:3.60.70.12 3 365 3.0E-128 T 13-09-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PANTHER PTHR24322 157 189 1.1E-47 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 SUPERFAMILY SSF51735 6 255 1.38E-75 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 Gene3D G3DSA:3.40.50.720 6 255 1.8E-78 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PANTHER PTHR24322 11 141 1.1E-47 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 254 1.1E-57 T 13-09-2016 PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PANTHER PTHR24322:SF328 157 189 1.1E-47 T 13-09-2016 PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 5.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.2E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 2.2E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.2E-10 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18700 24d194f86f8fce51fdf5cbe53ec39466 257 PANTHER PTHR24322:SF328 11 141 1.1E-47 T 13-09-2016 PMA3_RS14435 48ddfdf7ec8a7be8a97868b542584393 321 Gene3D G3DSA:3.40.10.10 273 321 1.7E-4 T 13-09-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PMA3_RS14435 48ddfdf7ec8a7be8a97868b542584393 321 Pfam PF04231 Endonuclease I 25 232 2.4E-50 T 13-09-2016 IPR007346 Endonuclease I GO:0004518 PMA3_RS14435 48ddfdf7ec8a7be8a97868b542584393 321 PANTHER PTHR33607 47 231 8.2E-34 T 13-09-2016 PMA3_RS14435 48ddfdf7ec8a7be8a97868b542584393 321 SUPERFAMILY SSF54060 23 233 1.29E-80 T 13-09-2016 PMA3_RS16505 bceb6ed4fee03fcdfb98fc09970f6442 428 Pfam PF01266 FAD dependent oxidoreductase 31 383 1.6E-50 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS16505 bceb6ed4fee03fcdfb98fc09970f6442 428 SUPERFAMILY SSF51905 29 332 1.04E-39 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16505 bceb6ed4fee03fcdfb98fc09970f6442 428 Gene3D G3DSA:3.50.50.60 24 120 2.7E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16505 bceb6ed4fee03fcdfb98fc09970f6442 428 Gene3D G3DSA:3.50.50.60 346 391 2.7E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16505 bceb6ed4fee03fcdfb98fc09970f6442 428 Gene3D G3DSA:3.50.50.60 173 254 2.7E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16505 bceb6ed4fee03fcdfb98fc09970f6442 428 PANTHER PTHR13847:SF210 1 428 3.8E-212 T 13-09-2016 PMA3_RS16505 bceb6ed4fee03fcdfb98fc09970f6442 428 PANTHER PTHR13847 1 428 3.8E-212 T 13-09-2016 PMA3_RS20005 86678383aee55d705ddc14769c41fd95 327 PANTHER PTHR30273 11 327 8.1E-71 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS20005 86678383aee55d705ddc14769c41fd95 327 Pfam PF16220 Domain of unknown function (DUF4880) 16 57 5.4E-14 T 13-09-2016 IPR032623 FecR, N-terminal PMA3_RS20005 86678383aee55d705ddc14769c41fd95 327 Pfam PF04773 FecR protein 118 209 1.5E-24 T 13-09-2016 IPR006860 FecR protein PMA3_RS20005 86678383aee55d705ddc14769c41fd95 327 PANTHER PTHR30273:SF2 11 327 8.1E-71 T 13-09-2016 PMA3_RS20005 86678383aee55d705ddc14769c41fd95 327 Pfam PF16344 Domain of unknown function (DUF4974) 239 311 2.6E-9 T 13-09-2016 IPR032508 Protein FecR, C-terminal PMA3_RS20005 86678383aee55d705ddc14769c41fd95 327 PIRSF PIRSF018266 10 327 9.2E-92 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS03925 3c95380aa25bf46c1523f9e27480f323 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 317 2.7E-23 T 13-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PMA3_RS03925 3c95380aa25bf46c1523f9e27480f323 321 Gene3D G3DSA:3.40.50.720 116 291 1.2E-59 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03925 3c95380aa25bf46c1523f9e27480f323 321 PANTHER PTHR10996:SF91 31 318 7.1E-107 T 13-09-2016 PMA3_RS03925 3c95380aa25bf46c1523f9e27480f323 321 SUPERFAMILY SSF52283 17 141 1.13E-27 T 13-09-2016 PMA3_RS03925 3c95380aa25bf46c1523f9e27480f323 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 290 3.7E-52 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS03925 3c95380aa25bf46c1523f9e27480f323 321 Gene3D G3DSA:3.40.50.720 17 115 1.5E-27 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03925 3c95380aa25bf46c1523f9e27480f323 321 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 13-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PMA3_RS03925 3c95380aa25bf46c1523f9e27480f323 321 PANTHER PTHR10996 31 318 7.1E-107 T 13-09-2016 PMA3_RS03925 3c95380aa25bf46c1523f9e27480f323 321 SUPERFAMILY SSF51735 106 291 7.01E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS25530 6dc5c446f6d6d97b8dbe1f8bf7fc6bb7 283 SUPERFAMILY SSF51717 12 280 4.32E-101 T 13-09-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 PMA3_RS25530 6dc5c446f6d6d97b8dbe1f8bf7fc6bb7 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 58 71 - T 13-09-2016 IPR000489 Pterin-binding domain GO:0042558 PMA3_RS25530 6dc5c446f6d6d97b8dbe1f8bf7fc6bb7 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 24 278 1.5E-96 T 13-09-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 PMA3_RS25530 6dc5c446f6d6d97b8dbe1f8bf7fc6bb7 283 Gene3D G3DSA:3.20.20.20 21 281 8.4E-104 T 13-09-2016 IPR000489 Pterin-binding domain GO:0042558 PMA3_RS25530 6dc5c446f6d6d97b8dbe1f8bf7fc6bb7 283 PANTHER PTHR20941 10 283 1.1E-111 T 13-09-2016 PMA3_RS25530 6dc5c446f6d6d97b8dbe1f8bf7fc6bb7 283 PANTHER PTHR20941:SF1 10 283 1.1E-111 T 13-09-2016 PMA3_RS25530 6dc5c446f6d6d97b8dbe1f8bf7fc6bb7 283 Pfam PF00809 Pterin binding enzyme 25 264 8.7E-80 T 13-09-2016 IPR000489 Pterin-binding domain GO:0042558 PMA3_RS25530 6dc5c446f6d6d97b8dbe1f8bf7fc6bb7 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 24 39 - T 13-09-2016 IPR000489 Pterin-binding domain GO:0042558 PMA3_RS28530 c964bdfd3de401ddc224531ee24b113d 66 SUPERFAMILY SSF54285 1 66 3.49E-19 T 13-09-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PMA3_RS28530 c964bdfd3de401ddc224531ee24b113d 66 Gene3D G3DSA:3.10.20.30 1 66 1.3E-28 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS28530 c964bdfd3de401ddc224531ee24b113d 66 PANTHER PTHR34472:SF1 1 66 1.5E-25 T 13-09-2016 PMA3_RS28530 c964bdfd3de401ddc224531ee24b113d 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.2E-23 T 13-09-2016 IPR010035 ThiS, thiamine-biosynthesis PMA3_RS28530 c964bdfd3de401ddc224531ee24b113d 66 PANTHER PTHR34472 1 66 1.5E-25 T 13-09-2016 PMA3_RS28530 c964bdfd3de401ddc224531ee24b113d 66 Pfam PF02597 ThiS family 5 66 1.7E-16 T 13-09-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 Gene3D G3DSA:1.10.287.950 296 513 1.3E-55 T 13-09-2016 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 542 7.8E-48 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 SMART SM00283 282 543 5.1E-72 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 PANTHER PTHR32089:SF34 86 544 8.3E-141 T 13-09-2016 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 SUPERFAMILY SSF58104 235 544 4.45E-74 T 13-09-2016 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 SMART SM01049 36 130 1.8E-41 T 13-09-2016 IPR033480 Single Cache domain 2 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 PANTHER PTHR32089 86 544 8.3E-141 T 13-09-2016 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 SMART SM00304 213 267 7.4E-12 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 Gene3D G3DSA:3.30.450.20 25 182 9.2E-58 T 13-09-2016 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 Pfam PF17200 Single Cache domain 2 42 191 2.1E-45 T 13-09-2016 IPR033480 Single Cache domain 2 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.0E-25 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 407 1.0E-25 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 1.0E-25 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 63 78 1.0E-25 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS13270 327dcd64cb824ebe9864d0414c84625c 544 Pfam PF00672 HAMP domain 195 264 8.8E-17 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS18605 77a6e59c641c12d304688a0a5b7d113e 302 SUPERFAMILY SSF54534 142 239 4.38E-5 T 13-09-2016 PMA3_RS18605 77a6e59c641c12d304688a0a5b7d113e 302 Pfam PF13145 PPIC-type PPIASE domain 135 253 4.7E-11 T 13-09-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PMA3_RS18605 77a6e59c641c12d304688a0a5b7d113e 302 Gene3D G3DSA:3.10.50.40 142 265 7.6E-9 T 13-09-2016 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 13-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 PANTHER PTHR33175:SF2 3 95 5.6E-54 T 13-09-2016 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 SMART SM00411 4 93 9.1E-40 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 PANTHER PTHR33175 3 95 5.6E-54 T 13-09-2016 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 97 6.1E-54 T 13-09-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.6E-17 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.6E-17 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.6E-17 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 Pfam PF00216 Bacterial DNA-binding protein 4 92 5.4E-31 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 SUPERFAMILY SSF47729 4 93 5.59E-31 T 13-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 Gene3D G3DSA:4.10.520.10 4 94 1.4E-35 T 13-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PMA3_RS09385 0f5084c6c1702eb45f182384bb315e30 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 30.612 T 13-09-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 PMA3_RS29810 5857e654202ebe491b828176e6ae27fe 298 Gene3D G3DSA:3.20.20.330 4 297 1.5E-73 T 13-09-2016 IPR003726 Homocysteine-binding domain PMA3_RS29810 5857e654202ebe491b828176e6ae27fe 298 SUPERFAMILY SSF82282 4 297 7.85E-80 T 13-09-2016 IPR003726 Homocysteine-binding domain PMA3_RS29810 5857e654202ebe491b828176e6ae27fe 298 PANTHER PTHR11103 6 297 1.1E-39 T 13-09-2016 PMA3_RS29810 5857e654202ebe491b828176e6ae27fe 298 Pfam PF02574 Homocysteine S-methyltransferase 6 296 1.3E-51 T 13-09-2016 IPR003726 Homocysteine-binding domain PMA3_RS29810 5857e654202ebe491b828176e6ae27fe 298 PIRSF PIRSF037505 2 298 3.4E-9 T 13-09-2016 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 UniPathway: UPA00051 PMA3_RS29810 5857e654202ebe491b828176e6ae27fe 298 PANTHER PTHR11103:SF7 6 297 1.1E-39 T 13-09-2016 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 256 330 1.4E-13 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 Gene3D G3DSA:3.10.20.30 225 333 2.5E-27 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 Pfam PF00175 Oxidoreductase NAD-binding domain 116 211 1.3E-12 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 206 1.3E-8 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 36 48 1.3E-8 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 114 133 1.3E-8 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 SUPERFAMILY SSF54292 221 339 4.72E-27 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 PANTHER PTHR19370 4 232 3.0E-46 T 13-09-2016 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 287 295 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 150 161 1.8E-9 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 36 46 1.8E-9 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 138 147 1.8E-9 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 1.8E-9 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 114 133 1.8E-9 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 Pfam PF00970 Oxidoreductase FAD-binding domain 8 104 1.4E-9 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 SUPERFAMILY SSF52343 95 228 6.94E-33 T 13-09-2016 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 SUPERFAMILY SSF63380 2 104 1.04E-24 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 Gene3D G3DSA:3.40.50.80 97 224 3.5E-30 T 13-09-2016 PMA3_RS11760 b0d042cfabf265cdf68642cc3ff7f302 340 Gene3D G3DSA:2.40.30.10 4 96 1.9E-24 T 13-09-2016 PMA3_RS26480 711f946e0ab84bbd20eba669b92e5e0c 306 PIRSF PIRSF016660 1 306 4.7E-105 T 13-09-2016 IPR008526 Inner membrane protein YedI PMA3_RS26480 711f946e0ab84bbd20eba669b92e5e0c 306 PANTHER PTHR30503 2 305 3.7E-84 T 13-09-2016 PMA3_RS26480 711f946e0ab84bbd20eba669b92e5e0c 306 Pfam PF05661 Protein of unknown function (DUF808) 4 294 7.4E-101 T 13-09-2016 IPR008526 Inner membrane protein YedI PMA3_RS09595 f33f7d4e167acdb2352fe1b72dd709d0 457 SUPERFAMILY SSF53383 10 445 1.19E-120 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS09595 f33f7d4e167acdb2352fe1b72dd709d0 457 Gene3D G3DSA:3.90.1150.10 3 63 2.3E-43 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS09595 f33f7d4e167acdb2352fe1b72dd709d0 457 Gene3D G3DSA:3.90.1150.10 344 447 2.3E-43 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS09595 f33f7d4e167acdb2352fe1b72dd709d0 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS09595 f33f7d4e167acdb2352fe1b72dd709d0 457 Gene3D G3DSA:3.40.640.10 64 342 1.8E-78 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS09595 f33f7d4e167acdb2352fe1b72dd709d0 457 PANTHER PTHR11986 7 452 5.0E-243 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS09595 f33f7d4e167acdb2352fe1b72dd709d0 457 PIRSF PIRSF000521 6 447 2.0E-32 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS09595 f33f7d4e167acdb2352fe1b72dd709d0 457 Pfam PF00202 Aminotransferase class-III 28 441 6.8E-102 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS09595 f33f7d4e167acdb2352fe1b72dd709d0 457 PANTHER PTHR11986:SF81 7 452 5.0E-243 T 13-09-2016 PMA3_RS20355 9b294fcb9a930a34e07a76ef2d805617 434 PANTHER PTHR11271:SF6 29 434 4.7E-171 T 13-09-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 PMA3_RS20355 9b294fcb9a930a34e07a76ef2d805617 434 SUPERFAMILY SSF51556 72 374 5.61E-103 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS20355 9b294fcb9a930a34e07a76ef2d805617 434 Pfam PF01979 Amidohydrolase family 70 431 7.1E-72 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS20355 9b294fcb9a930a34e07a76ef2d805617 434 SUPERFAMILY SSF51338 373 431 1.12E-5 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS20355 9b294fcb9a930a34e07a76ef2d805617 434 Gene3D G3DSA:3.20.20.140 81 374 5.1E-119 T 13-09-2016 PMA3_RS20355 9b294fcb9a930a34e07a76ef2d805617 434 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 428 3.5E-191 T 13-09-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 PMA3_RS20355 9b294fcb9a930a34e07a76ef2d805617 434 SUPERFAMILY SSF51338 29 88 1.96E-10 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS20355 9b294fcb9a930a34e07a76ef2d805617 434 PANTHER PTHR11271 29 434 4.7E-171 T 13-09-2016 PMA3_RS20355 9b294fcb9a930a34e07a76ef2d805617 434 Gene3D G3DSA:2.30.40.10 32 80 2.5E-10 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS21120 1a82dc550b681e73767fedd74873ff34 216 PANTHER PTHR21712:SF31 1 212 2.1E-87 T 13-09-2016 PMA3_RS21120 1a82dc550b681e73767fedd74873ff34 216 Gene3D G3DSA:3.40.109.10 7 213 9.1E-44 T 13-09-2016 IPR000415 Nitroreductase-like GO:0016491 PMA3_RS21120 1a82dc550b681e73767fedd74873ff34 216 SUPERFAMILY SSF55469 14 213 7.2E-45 T 13-09-2016 IPR000415 Nitroreductase-like GO:0016491 PMA3_RS21120 1a82dc550b681e73767fedd74873ff34 216 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 6 206 2.0E-71 T 13-09-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 PMA3_RS21120 1a82dc550b681e73767fedd74873ff34 216 Pfam PF00881 Nitroreductase family 18 181 1.9E-26 T 13-09-2016 IPR029479 Nitroreductase PMA3_RS21120 1a82dc550b681e73767fedd74873ff34 216 PANTHER PTHR21712 1 212 2.1E-87 T 13-09-2016 PMA3_RS10385 12e1314c5947cb9ae2797aca763f60c5 442 Gene3D G3DSA:1.20.1250.20 19 203 6.3E-32 T 13-09-2016 PMA3_RS10385 12e1314c5947cb9ae2797aca763f60c5 442 Pfam PF07690 Major Facilitator Superfamily 32 376 3.0E-43 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS10385 12e1314c5947cb9ae2797aca763f60c5 442 SUPERFAMILY SSF103473 15 414 1.83E-71 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS10385 12e1314c5947cb9ae2797aca763f60c5 442 Gene3D G3DSA:1.20.1250.20 221 413 1.9E-20 T 13-09-2016 PMA3_RS10385 12e1314c5947cb9ae2797aca763f60c5 442 PANTHER PTHR23505 37 423 2.0E-51 T 13-09-2016 PMA3_RS06340 1ab00753348271e902dca59d995c0684 379 PANTHER PTHR11360 1 374 1.2E-66 T 13-09-2016 PMA3_RS06340 1ab00753348271e902dca59d995c0684 379 Gene3D G3DSA:1.20.1250.20 10 177 2.1E-17 T 13-09-2016 PMA3_RS06340 1ab00753348271e902dca59d995c0684 379 Gene3D G3DSA:1.20.1250.20 202 376 4.8E-5 T 13-09-2016 PMA3_RS06340 1ab00753348271e902dca59d995c0684 379 SUPERFAMILY SSF103473 3 376 1.44E-32 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS06340 1ab00753348271e902dca59d995c0684 379 Pfam PF07690 Major Facilitator Superfamily 6 257 6.9E-16 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS06340 1ab00753348271e902dca59d995c0684 379 PANTHER PTHR11360:SF126 1 374 1.2E-66 T 13-09-2016 PMA3_RS00520 b87be7e8ae6d2eb885025e8129b3af4a 330 PANTHER PTHR26402:SF547 2 130 5.7E-23 T 13-09-2016 PMA3_RS00520 b87be7e8ae6d2eb885025e8129b3af4a 330 SUPERFAMILY SSF103039 142 327 7.32E-40 T 13-09-2016 IPR028976 CheC-like domain PMA3_RS00520 b87be7e8ae6d2eb885025e8129b3af4a 330 PANTHER PTHR26402 2 130 5.7E-23 T 13-09-2016 PMA3_RS00520 b87be7e8ae6d2eb885025e8129b3af4a 330 SUPERFAMILY SSF52172 2 117 2.7E-28 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS00520 b87be7e8ae6d2eb885025e8129b3af4a 330 Gene3D G3DSA:3.40.50.2300 2 117 5.4E-26 T 13-09-2016 PMA3_RS00520 b87be7e8ae6d2eb885025e8129b3af4a 330 SMART SM00448 2 114 2.6E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS00520 b87be7e8ae6d2eb885025e8129b3af4a 330 Gene3D G3DSA:3.40.1550.10 142 328 4.8E-35 T 13-09-2016 IPR028976 CheC-like domain PMA3_RS00520 b87be7e8ae6d2eb885025e8129b3af4a 330 Pfam PF00072 Response regulator receiver domain 5 114 2.4E-21 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 Pfam PF03466 LysR substrate binding domain 87 283 1.6E-33 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 Gene3D G3DSA:3.40.190.10 99 175 2.7E-14 T 13-09-2016 PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 SUPERFAMILY SSF53850 90 283 3.75E-30 T 13-09-2016 PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 5 284 1.8E-104 T 13-09-2016 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.4E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.4E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.4E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 Gene3D G3DSA:3.40.190.10 176 255 2.7E-22 T 13-09-2016 PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 SUPERFAMILY SSF46785 1 83 1.03E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 Gene3D G3DSA:1.10.10.10 1 79 3.1E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 PANTHER PTHR30126 1 283 2.2E-144 T 13-09-2016 PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 PANTHER PTHR30126:SF17 1 283 2.2E-144 T 13-09-2016 PMA3_RS08205 cad05ef97b508e1b8328d7d06f456c4b 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 7.0E-22 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 Pfam PF07732 Multicopper oxidase 54 161 6.2E-32 T 13-09-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 PANTHER PTHR11709:SF33 56 457 7.5E-90 T 13-09-2016 PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 SUPERFAMILY SSF49503 26 160 3.47E-34 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 Gene3D G3DSA:2.60.40.420 35 157 2.6E-33 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 SUPERFAMILY SSF49503 162 280 2.53E-16 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 ProSitePatterns PS00080 Multicopper oxidases signature 2. 440 451 - T 13-09-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 SUPERFAMILY SSF49503 326 457 1.53E-33 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 Pfam PF07731 Multicopper oxidase 359 457 2.4E-26 T 13-09-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 Gene3D G3DSA:2.60.40.420 158 280 7.2E-15 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 PANTHER PTHR11709 56 457 7.5E-90 T 13-09-2016 PMA3_RS24100 6bcb6b6ac06997d9eb7a0678e4349c7c 458 Gene3D G3DSA:2.60.40.420 314 457 3.5E-43 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 17 479 8.0E-116 T 13-09-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 Pfam PF13091 PLD-like domain 135 278 5.9E-11 T 13-09-2016 IPR025202 Phospholipase D-like domain PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 Pfam PF13091 PLD-like domain 320 444 1.3E-24 T 13-09-2016 IPR025202 Phospholipase D-like domain PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 SUPERFAMILY SSF56024 100 308 4.93E-54 T 13-09-2016 PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 479 47.614 T 13-09-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 60 5.3E-6 T 13-09-2016 IPR027379 Cardiolipin synthase N-terminal PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 Gene3D G3DSA:3.30.870.10 318 476 3.1E-36 T 13-09-2016 PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 Gene3D G3DSA:3.30.870.10 113 310 8.4E-47 T 13-09-2016 PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 SMART SM00155 392 419 9.2E-7 T 13-09-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 SMART SM00155 218 245 4.6E-5 T 13-09-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 SUPERFAMILY SSF56024 270 457 1.55E-44 T 13-09-2016 PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 PANTHER PTHR21248:SF9 19 479 2.8E-194 T 13-09-2016 PMA3_RS29920 0dd68871ba49edb38c963a3540fbfd7f 479 PANTHER PTHR21248 19 479 2.8E-194 T 13-09-2016 PMA3_RS09160 746629efe2c3d1c67a990214b9298eb2 306 Pfam PF01497 Periplasmic binding protein 40 276 1.8E-20 T 13-09-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PMA3_RS09160 746629efe2c3d1c67a990214b9298eb2 306 PANTHER PTHR30532 35 298 1.4E-56 T 13-09-2016 PMA3_RS09160 746629efe2c3d1c67a990214b9298eb2 306 PANTHER PTHR30532:SF3 35 298 1.4E-56 T 13-09-2016 PMA3_RS09160 746629efe2c3d1c67a990214b9298eb2 306 SUPERFAMILY SSF53807 35 298 1.49E-54 T 13-09-2016 PMA3_RS09160 746629efe2c3d1c67a990214b9298eb2 306 Gene3D G3DSA:3.40.50.1980 35 125 1.7E-24 T 13-09-2016 PMA3_RS09160 746629efe2c3d1c67a990214b9298eb2 306 Gene3D G3DSA:3.40.50.1980 129 298 2.0E-32 T 13-09-2016 PMA3_RS13175 548b6213d36819915f4d0576f46e2cc7 193 SUPERFAMILY SSF109854 7 154 2.2E-32 T 13-09-2016 PMA3_RS13175 548b6213d36819915f4d0576f46e2cc7 193 Pfam PF05163 DinB family 7 168 3.4E-26 T 13-09-2016 IPR007837 DNA damage-inducible protein DinB PMA3_RS13175 548b6213d36819915f4d0576f46e2cc7 193 Gene3D G3DSA:1.20.120.450 7 168 1.5E-31 T 13-09-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 Pfam PF01494 FAD binding domain 2 342 2.6E-92 T 13-09-2016 IPR002938 FAD-binding domain GO:0071949 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 Gene3D G3DSA:3.50.50.60 93 146 7.2E-5 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 391 1.3E-206 T 13-09-2016 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 Gene3D G3DSA:3.30.9.10 147 299 5.5E-68 T 13-09-2016 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 PANTHER PTHR13789 1 395 1.2E-199 T 13-09-2016 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 SUPERFAMILY SSF51905 274 354 2.46E-54 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 SUPERFAMILY SSF51905 1 172 2.46E-54 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 Gene3D G3DSA:3.40.50.720 2 64 2.0E-5 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.6E-31 T 13-09-2016 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.6E-31 T 13-09-2016 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.6E-31 T 13-09-2016 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 328 3.6E-31 T 13-09-2016 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.6E-31 T 13-09-2016 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 SUPERFAMILY SSF54373 175 275 5.89E-45 T 13-09-2016 PMA3_RS18510 1744d83071490d14e2d1a37a73e2772d 395 PANTHER PTHR13789:SF192 1 395 1.2E-199 T 13-09-2016 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 SUPERFAMILY SSF52242 744 896 2.75E-44 T 13-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 942 1218 2.0E-117 T 13-09-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 Gene3D G3DSA:3.10.196.10 961 1235 2.8E-105 T 13-09-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 Gene3D G3DSA:3.20.20.330 9 366 2.2E-125 T 13-09-2016 IPR003726 Homocysteine-binding domain PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 TIGRFAM TIGR02082 metH: methionine synthase 15 1202 0.0 T 13-09-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 SMART SM01018 658 741 2.0E-41 T 13-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 Gene3D G3DSA:3.40.50.280 747 897 1.1E-62 T 13-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 PANTHER PTHR21091:SF111 1 405 6.7E-175 T 13-09-2016 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 Gene3D G3DSA:1.10.1240.10 651 738 4.7E-38 T 13-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 SUPERFAMILY SSF56507 905 1235 7.46E-122 T 13-09-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 Pfam PF02607 B12 binding domain 661 733 9.0E-24 T 13-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 PIRSF PIRSF000381 4 1205 0.0 T 13-09-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 Pfam PF00809 Pterin binding enzyme 363 601 4.3E-56 T 13-09-2016 IPR000489 Pterin-binding domain GO:0042558 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 SUPERFAMILY SSF51717 359 632 5.23E-88 T 13-09-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 SUPERFAMILY SSF82282 11 402 1.44E-114 T 13-09-2016 IPR003726 Homocysteine-binding domain PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 Pfam PF02310 B12 binding domain 750 843 3.3E-18 T 13-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 SUPERFAMILY SSF47644 653 739 3.01E-27 T 13-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 Gene3D G3DSA:3.20.20.20 367 639 7.7E-112 T 13-09-2016 IPR000489 Pterin-binding domain GO:0042558 PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 Pfam PF02574 Homocysteine S-methyltransferase 20 328 5.6E-89 T 13-09-2016 IPR003726 Homocysteine-binding domain PMA3_RS12240 fadf5554bf8ab10c410c7575f18842a4 1236 PANTHER PTHR21091 1 405 6.7E-175 T 13-09-2016 PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 SUPERFAMILY SSF48008 104 215 3.14E-8 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 3.8E-14 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 SUPERFAMILY SSF46785 5 75 5.56E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 Gene3D G3DSA:1.10.10.10 5 72 1.2E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 PANTHER PTHR11751:SF426 191 209 6.6E-14 T 13-09-2016 PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 Pfam PF07729 FCD domain 102 203 4.7E-7 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 SMART SM00345 13 71 1.3E-13 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 PANTHER PTHR11751:SF426 11 78 6.6E-14 T 13-09-2016 PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 Gene3D G3DSA:1.20.120.530 102 217 9.2E-9 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 PANTHER PTHR11751 191 209 6.6E-14 T 13-09-2016 PMA3_RS20335 dc505e4372c7aa44500dca116e916255 219 PANTHER PTHR11751 11 78 6.6E-14 T 13-09-2016 PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 SUPERFAMILY SSF53383 925 947 1.02E-102 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 SUPERFAMILY SSF53383 462 883 1.02E-102 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 Gene3D G3DSA:3.40.640.10 503 741 1.2E-39 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 Gene3D G3DSA:3.40.640.10 85 308 1.6E-13 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 SUPERFAMILY SSF53383 18 444 3.09E-100 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 PANTHER PTHR11773 13 953 0.0 T 13-09-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 9 952 26.145 T 13-09-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 18 946 0.0 T 13-09-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 Pfam PF02347 Glycine cleavage system P-protein 459 735 1.6E-9 T 13-09-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 Pfam PF02347 Glycine cleavage system P-protein 18 442 5.6E-180 T 13-09-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PMA3_RS23180 befce044e6f33df085523e3dea77b7b7 953 PANTHER PTHR11773:SF1 13 953 0.0 T 13-09-2016 PMA3_RS18230 d26a4e714075140fe06e768b3855df5f 256 Pfam PF01636 Phosphotransferase enzyme family 37 249 4.0E-33 T 13-09-2016 IPR002575 Aminoglycoside phosphotransferase PMA3_RS18230 d26a4e714075140fe06e768b3855df5f 256 PIRSF PIRSF000706 1 256 5.2E-89 T 13-09-2016 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 PMA3_RS18230 d26a4e714075140fe06e768b3855df5f 256 SUPERFAMILY SSF56112 5 256 6.64E-54 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS18230 d26a4e714075140fe06e768b3855df5f 256 Gene3D G3DSA:3.90.1200.10 88 255 1.1E-43 T 13-09-2016 PMA3_RS18230 d26a4e714075140fe06e768b3855df5f 256 Gene3D G3DSA:3.30.200.20 3 86 2.6E-24 T 13-09-2016 PMA3_RS04470 9fdcabb6fca381059f01a0c050a50fca 250 SUPERFAMILY SSF75217 4 247 3.4E-101 T 13-09-2016 IPR029028 Alpha/beta knot methyltransferases PMA3_RS04470 9fdcabb6fca381059f01a0c050a50fca 250 PIRSF PIRSF000386 4 248 4.0E-99 T 13-09-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PMA3_RS04470 9fdcabb6fca381059f01a0c050a50fca 250 Gene3D G3DSA:3.40.1280.10 4 163 1.9E-67 T 13-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PMA3_RS04470 9fdcabb6fca381059f01a0c050a50fca 250 PANTHER PTHR32125 1 231 2.3E-117 T 13-09-2016 PMA3_RS04470 9fdcabb6fca381059f01a0c050a50fca 250 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 5 235 8.1E-99 T 13-09-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PMA3_RS04470 9fdcabb6fca381059f01a0c050a50fca 250 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 250 115.182 T 13-09-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PMA3_RS04470 9fdcabb6fca381059f01a0c050a50fca 250 PANTHER PTHR32125:SF1 1 231 2.3E-117 T 13-09-2016 PMA3_RS04470 9fdcabb6fca381059f01a0c050a50fca 250 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 26 223 1.8E-63 T 13-09-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PMA3_RS04470 9fdcabb6fca381059f01a0c050a50fca 250 Gene3D G3DSA:1.10.1270.20 164 246 8.9E-35 T 13-09-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 Gene3D G3DSA:2.40.30.10 36 126 1.3E-27 T 13-09-2016 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 330 338 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PANTHER PTHR19370:SF89 41 292 4.1E-87 T 13-09-2016 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 SUPERFAMILY SSF54292 264 380 2.62E-27 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 Gene3D G3DSA:3.10.20.30 267 379 7.1E-32 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 SUPERFAMILY SSF52343 128 270 7.46E-31 T 13-09-2016 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PANTHER PTHR19370 41 292 4.1E-87 T 13-09-2016 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 300 373 3.4E-11 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 147 166 1.4E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 87 94 1.4E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 68 78 1.4E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 184 195 1.4E-5 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PRINTS PR00406 Cytochrome B5 reductase signature 87 94 1.3E-6 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PRINTS PR00406 Cytochrome B5 reductase signature 184 195 1.3E-6 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PRINTS PR00406 Cytochrome B5 reductase signature 124 138 1.3E-6 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PRINTS PR00406 Cytochrome B5 reductase signature 147 166 1.3E-6 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 PRINTS PR00406 Cytochrome B5 reductase signature 240 248 1.3E-6 T 13-09-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 SUPERFAMILY SSF63380 37 138 1.55E-28 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 Pfam PF00970 Oxidoreductase FAD-binding domain 48 136 1.0E-14 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 Pfam PF00175 Oxidoreductase NAD-binding domain 149 254 4.9E-12 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS14210 89d241c4ed1e108f93cd475b4081cd6f 380 Gene3D G3DSA:3.40.50.80 127 266 4.4E-30 T 13-09-2016 PMA3_RS20395 ed16503f2ee91d196b9dc295ab0d5937 403 PANTHER PTHR30024 1 392 9.2E-155 T 13-09-2016 PMA3_RS20395 ed16503f2ee91d196b9dc295ab0d5937 403 Pfam PF13379 NMT1-like family 16 267 1.2E-100 T 13-09-2016 PMA3_RS20395 ed16503f2ee91d196b9dc295ab0d5937 403 PANTHER PTHR30024:SF7 1 392 9.2E-155 T 13-09-2016 PMA3_RS20395 ed16503f2ee91d196b9dc295ab0d5937 403 Gene3D G3DSA:3.40.190.10 146 244 3.1E-8 T 13-09-2016 PMA3_RS20395 ed16503f2ee91d196b9dc295ab0d5937 403 SUPERFAMILY SSF53850 19 256 2.26E-29 T 13-09-2016 PMA3_RS04085 e5c00e6ca701d98392ef6f89024319ff 603 Pfam PF04348 LppC putative lipoprotein 33 593 6.2E-172 T 13-09-2016 IPR007443 Penicillin-binding protein activator LpoA PMA3_RS04085 e5c00e6ca701d98392ef6f89024319ff 603 PANTHER PTHR38038 1 600 7.0E-166 T 13-09-2016 PMA3_RS04085 e5c00e6ca701d98392ef6f89024319ff 603 SUPERFAMILY SSF53822 251 418 2.16E-77 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS04085 e5c00e6ca701d98392ef6f89024319ff 603 SUPERFAMILY SSF53822 446 597 2.16E-77 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS04085 e5c00e6ca701d98392ef6f89024319ff 603 Gene3D G3DSA:3.40.50.2300 360 522 2.1E-50 T 13-09-2016 PMA3_RS04085 e5c00e6ca701d98392ef6f89024319ff 603 PANTHER PTHR38038:SF1 1 600 7.0E-166 T 13-09-2016 PMA3_RS04085 e5c00e6ca701d98392ef6f89024319ff 603 Gene3D G3DSA:3.40.50.2300 523 586 1.3E-54 T 13-09-2016 PMA3_RS04085 e5c00e6ca701d98392ef6f89024319ff 603 Gene3D G3DSA:3.40.50.2300 251 358 1.3E-54 T 13-09-2016 PMA3_RS04935 addb0207dab414b4470a207f81adb426 235 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 228 2.0E-71 T 13-09-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04935 addb0207dab414b4470a207f81adb426 235 PANTHER PTHR32125 9 226 3.4E-69 T 13-09-2016 PMA3_RS04935 addb0207dab414b4470a207f81adb426 235 SUPERFAMILY SSF53448 8 231 5.41E-55 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS04935 addb0207dab414b4470a207f81adb426 235 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 13-09-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04935 addb0207dab414b4470a207f81adb426 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 224 6.2E-64 T 13-09-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04935 addb0207dab414b4470a207f81adb426 235 Gene3D G3DSA:3.90.550.10 8 232 1.4E-65 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS04935 addb0207dab414b4470a207f81adb426 235 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 235 29.447 T 13-09-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04935 addb0207dab414b4470a207f81adb426 235 PANTHER PTHR32125:SF4 9 226 3.4E-69 T 13-09-2016 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 SUPERFAMILY SSF81296 12 96 3.2E-16 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 Pfam PF11941 Domain of unknown function (DUF3459) 493 582 2.0E-17 T 13-09-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 Gene3D G3DSA:2.60.40.10 12 96 7.1E-25 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 21 548 7.8E-203 T 13-09-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 PANTHER PTHR10357 470 547 2.7E-107 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 PANTHER PTHR10357 12 449 2.7E-107 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 SUPERFAMILY SSF51445 93 504 9.6E-105 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 Gene3D G3DSA:3.20.20.80 101 427 5.5E-81 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 Gene3D G3DSA:3.20.20.80 468 502 5.5E-81 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 PANTHER PTHR10357:SF110 470 547 2.7E-107 T 13-09-2016 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 PANTHER PTHR10357:SF110 12 449 2.7E-107 T 13-09-2016 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 SMART SM00642 95 448 2.2E-9 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 PIRSF PIRSF006337 7 585 1.5E-223 T 13-09-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 Pfam PF00128 Alpha amylase, catalytic domain 130 214 1.9E-12 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14900 c88f770ebec939c6445a9fb277aaeb1a 598 Pfam PF00128 Alpha amylase, catalytic domain 230 423 1.1E-4 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS18685 b290c609e7fe79721686e9fedf12718e 317 Gene3D G3DSA:3.90.226.10 2 280 1.8E-57 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS18685 b290c609e7fe79721686e9fedf12718e 317 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 92 112 - T 13-09-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PMA3_RS18685 b290c609e7fe79721686e9fedf12718e 317 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 183 1.1E-33 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS18685 b290c609e7fe79721686e9fedf12718e 317 PANTHER PTHR23309:SF9 2 282 1.0E-90 T 13-09-2016 PMA3_RS18685 b290c609e7fe79721686e9fedf12718e 317 SUPERFAMILY SSF52096 3 283 6.8E-61 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS18685 b290c609e7fe79721686e9fedf12718e 317 PANTHER PTHR23309 2 282 1.0E-90 T 13-09-2016 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 61.745 T 13-09-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 318 1.5E-133 T 13-09-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 PANTHER PTHR11735 1 338 3.4E-161 T 13-09-2016 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 SUPERFAMILY SSF53067 3 122 9.71E-32 T 13-09-2016 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 Gene3D G3DSA:3.30.420.40 1 159 1.8E-50 T 13-09-2016 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 PANTHER PTHR11735:SF6 1 338 3.4E-161 T 13-09-2016 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 1.1E-119 T 13-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.4E-52 T 13-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.4E-52 T 13-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.4E-52 T 13-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.4E-52 T 13-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.4E-52 T 13-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.4E-52 T 13-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 SUPERFAMILY SSF53067 101 313 2.83E-42 T 13-09-2016 PMA3_RS27620 f8b9c834121553f9e1830650672f261c 341 Pfam PF00814 Glycoprotease family 24 311 4.6E-101 T 13-09-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 TIGRFAM TIGR00746 arcC: carbamate kinase 1 300 6.2E-130 T 13-09-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 Gene3D G3DSA:3.40.1160.10 1 299 1.3E-96 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 PANTHER PTHR30409:SF1 1 302 1.3E-151 T 13-09-2016 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 Pfam PF00696 Amino acid kinase family 1 281 3.1E-25 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 6.9E-67 T 13-09-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 6.9E-67 T 13-09-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 PRINTS PR01469 Bacterial carbamate kinase signature 256 271 6.9E-67 T 13-09-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 6.9E-67 T 13-09-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 6.9E-67 T 13-09-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 PRINTS PR01469 Bacterial carbamate kinase signature 205 220 6.9E-67 T 13-09-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 PRINTS PR01469 Bacterial carbamate kinase signature 71 89 6.9E-67 T 13-09-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 PIRSF PIRSF000723 1 301 7.0E-112 T 13-09-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 SUPERFAMILY SSF53633 1 299 7.59E-78 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS14085 c7baf8ece46352c43b88bbad7483c332 309 PANTHER PTHR30409 1 302 1.3E-151 T 13-09-2016 PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 2.9E-252 T 13-09-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 PANTHER PTHR21000 1 369 0.0 T 13-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 13-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 PANTHER PTHR21000 404 612 0.0 T 13-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 PANTHER PTHR21000:SF11 404 612 0.0 T 13-09-2016 PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 Pfam PF00920 Dehydratase family 34 603 5.4E-218 T 13-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 PANTHER PTHR21000:SF11 1 369 0.0 T 13-09-2016 PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 SUPERFAMILY SSF143975 3 418 7.45E-138 T 13-09-2016 PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 SUPERFAMILY SSF52016 419 606 4.63E-59 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.871 T 13-09-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS28660 91b55a7a37bd0d8d23ff0df7fbf94a00 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 13-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 Gene3D G3DSA:3.10.20.30 2 100 3.6E-26 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 SUPERFAMILY SSF54292 1 100 1.97E-27 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 Pfam PF00970 Oxidoreductase FAD-binding domain 109 202 1.7E-17 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 Pfam PF00175 Oxidoreductase NAD-binding domain 212 314 4.0E-21 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PANTHER PTHR19370:SF128 1 332 1.7E-61 T 13-09-2016 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 SUPERFAMILY SSF52343 202 333 8.51E-35 T 13-09-2016 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 1.4E-15 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PANTHER PTHR19370 1 332 1.7E-61 T 13-09-2016 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 Gene3D G3DSA:2.40.30.10 106 198 3.1E-23 T 13-09-2016 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 SUPERFAMILY SSF63380 76 204 1.63E-24 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 153 160 9.9E-25 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 211 230 9.9E-25 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 236 245 9.9E-25 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 205 9.9E-25 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 9.9E-25 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 148 9.9E-25 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 153 160 1.8E-6 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 300 308 1.8E-6 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 211 230 1.8E-6 T 13-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PMA3_RS10995 a35ee2f809770fa9ee3c284bc72a8c65 337 Gene3D G3DSA:3.40.50.80 205 333 3.5E-35 T 13-09-2016 PMA3_RS08710 84751a4d3bbc5411de02308861289d48 414 PANTHER PTHR30489 1 414 4.7E-111 T 13-09-2016 PMA3_RS08710 84751a4d3bbc5411de02308861289d48 414 Pfam PF02687 FtsX-like permease family 274 407 4.4E-20 T 13-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PMA3_RS08710 84751a4d3bbc5411de02308861289d48 414 PANTHER PTHR30489:SF8 1 414 4.7E-111 T 13-09-2016 PMA3_RS08710 84751a4d3bbc5411de02308861289d48 414 Pfam PF12704 MacB-like periplasmic core domain 27 231 1.2E-19 T 13-09-2016 IPR025857 MacB-like periplasmic core domain PMA3_RS08710 84751a4d3bbc5411de02308861289d48 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 4.7E-150 T 13-09-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 Gene3D G3DSA:3.30.1490.130 285 340 2.0E-25 T 13-09-2016 IPR023100 D-aminoacylase, insert domain GO:0016811 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 Gene3D G3DSA:2.30.40.10 5 69 3.0E-18 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 SUPERFAMILY SSF51338 5 59 3.78E-19 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 SUPERFAMILY SSF51338 424 477 3.78E-19 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 PANTHER PTHR22935 340 477 1.1E-34 T 13-09-2016 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 Pfam PF07969 Amidohydrolase family 47 460 1.4E-46 T 13-09-2016 IPR013108 Amidohydrolase 3 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 Gene3D G3DSA:3.20.20.140 70 282 4.8E-117 T 13-09-2016 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 Gene3D G3DSA:3.20.20.140 341 400 4.8E-117 T 13-09-2016 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 Gene3D G3DSA:2.30.40.10 401 466 2.6E-11 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 PANTHER PTHR22935:SF55 340 477 1.1E-34 T 13-09-2016 PMA3_RS07985 79df6d0b7d05df649ad8468fb3500ba6 477 SUPERFAMILY SSF51556 58 416 8.67E-90 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS02555 5d52bc5db9d81d51910053e3a77ea41f 292 PANTHER PTHR18895 12 292 1.3E-146 T 13-09-2016 PMA3_RS02555 5d52bc5db9d81d51910053e3a77ea41f 292 PANTHER PTHR18895:SF69 12 292 1.3E-146 T 13-09-2016 PMA3_RS02555 5d52bc5db9d81d51910053e3a77ea41f 292 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 285 1.2E-89 T 13-09-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PMA3_RS02555 5d52bc5db9d81d51910053e3a77ea41f 292 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 6.6E-95 T 13-09-2016 PMA3_RS02555 5d52bc5db9d81d51910053e3a77ea41f 292 PIRSF PIRSF000401 1 292 2.9E-88 T 13-09-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PMA3_RS02555 5d52bc5db9d81d51910053e3a77ea41f 292 Gene3D G3DSA:3.40.50.150 97 285 1.4E-39 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS02555 5d52bc5db9d81d51910053e3a77ea41f 292 SUPERFAMILY SSF53335 73 290 4.97E-43 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS02555 5d52bc5db9d81d51910053e3a77ea41f 292 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 33.145 T 13-09-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PMA3_RS28265 51205f4e5aa8aaf254b98c30d3031cde 295 PANTHER PTHR30520:SF2 11 272 3.5E-139 T 13-09-2016 PMA3_RS28265 51205f4e5aa8aaf254b98c30d3031cde 295 Gene3D G3DSA:1.20.1080.10 45 272 9.4E-50 T 13-09-2016 IPR023271 Aquaporin-like PMA3_RS28265 51205f4e5aa8aaf254b98c30d3031cde 295 Pfam PF01226 Formate/nitrite transporter 34 267 1.9E-42 T 13-09-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 PMA3_RS28265 51205f4e5aa8aaf254b98c30d3031cde 295 PANTHER PTHR30520 11 272 3.5E-139 T 13-09-2016 PMA3_RS12075 6ef9992fa2410493cc15b5d3ff1013e7 220 SMART SM00903 20 173 7.9E-25 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS12075 6ef9992fa2410493cc15b5d3ff1013e7 220 PANTHER PTHR33798:SF1 1 205 1.3E-78 T 13-09-2016 PMA3_RS12075 6ef9992fa2410493cc15b5d3ff1013e7 220 PANTHER PTHR33798 1 205 1.3E-78 T 13-09-2016 PMA3_RS12075 6ef9992fa2410493cc15b5d3ff1013e7 220 Pfam PF01613 Flavin reductase like domain 23 173 1.5E-20 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS12075 6ef9992fa2410493cc15b5d3ff1013e7 220 SUPERFAMILY SSF50475 3 197 1.28E-46 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS12075 6ef9992fa2410493cc15b5d3ff1013e7 220 Gene3D G3DSA:2.30.110.10 12 190 1.2E-55 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 9 58 5.8E-5 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 PANTHER PTHR11615:SF125 9 701 1.8E-223 T 13-09-2016 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 Gene3D G3DSA:3.40.228.10 156 327 2.8E-44 T 13-09-2016 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 Gene3D G3DSA:2.20.25.90 4 65 2.3E-13 T 13-09-2016 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 SUPERFAMILY SSF53706 6 620 2.75E-125 T 13-09-2016 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 Gene3D G3DSA:2.40.40.20 574 699 3.4E-25 T 13-09-2016 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 Pfam PF00384 Molybdopterin oxidoreductase 64 482 5.6E-38 T 13-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 Gene3D G3DSA:3.40.50.740 66 141 5.0E-51 T 13-09-2016 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 Gene3D G3DSA:3.40.50.740 328 551 5.0E-51 T 13-09-2016 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 Pfam PF01568 Molydopterin dinucleotide binding domain 575 694 6.2E-24 T 13-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 SMART SM00926 3 61 1.0E-8 T 13-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PMA3_RS23790 cbf91a2e72d35b4d9000aabcd4627095 701 PANTHER PTHR11615 9 701 1.8E-223 T 13-09-2016 PMA3_RS24540 c2efe29495410b59ae6b3758e3fed259 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 1.2E-91 T 13-09-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 PMA3_RS24540 c2efe29495410b59ae6b3758e3fed259 295 PANTHER PTHR11048 1 288 4.1E-131 T 13-09-2016 PMA3_RS24540 c2efe29495410b59ae6b3758e3fed259 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 17.708 T 13-09-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 PMA3_RS24540 c2efe29495410b59ae6b3758e3fed259 295 Pfam PF01040 UbiA prenyltransferase family 20 267 3.8E-57 T 13-09-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PMA3_RS24540 c2efe29495410b59ae6b3758e3fed259 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 13-09-2016 IPR030470 UbiA prenyltransferase conserved site PMA3_RS24540 c2efe29495410b59ae6b3758e3fed259 295 PANTHER PTHR11048:SF20 1 288 4.1E-131 T 13-09-2016 PMA3_RS19635 aad770470673c5d79694938db50a5f0c 207 Pfam PF04356 Protein of unknown function (DUF489) 7 198 4.0E-67 T 13-09-2016 IPR007451 Uncharacterised protein family UPF0274 PMA3_RS19635 aad770470673c5d79694938db50a5f0c 207 SUPERFAMILY SSF101322 2 205 1.16E-71 T 13-09-2016 IPR007451 Uncharacterised protein family UPF0274 PMA3_RS19635 aad770470673c5d79694938db50a5f0c 207 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 10 196 2.0E-99 T 13-09-2016 IPR007451 Uncharacterised protein family UPF0274 PMA3_RS19635 aad770470673c5d79694938db50a5f0c 207 Gene3D G3DSA:1.10.3890.10 2 205 3.9E-75 T 13-09-2016 IPR007451 Uncharacterised protein family UPF0274 PMA3_RS19635 aad770470673c5d79694938db50a5f0c 207 PANTHER PTHR38100 1 207 4.4E-84 T 13-09-2016 PMA3_RS19635 aad770470673c5d79694938db50a5f0c 207 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 205 32.406 T 13-09-2016 IPR007451 Uncharacterised protein family UPF0274 PMA3_RS19635 aad770470673c5d79694938db50a5f0c 207 PANTHER PTHR38100:SF1 1 207 4.4E-84 T 13-09-2016 PMA3_RS15040 6cd98e7eb693db34a41b0c7772a7a0a2 141 PANTHER PTHR35174:SF1 2 140 1.3E-69 T 13-09-2016 PMA3_RS15040 6cd98e7eb693db34a41b0c7772a7a0a2 141 Gene3D G3DSA:3.30.70.1060 1 118 3.2E-40 T 13-09-2016 PMA3_RS15040 6cd98e7eb693db34a41b0c7772a7a0a2 141 SUPERFAMILY SSF54909 1 119 4.83E-38 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS15040 6cd98e7eb693db34a41b0c7772a7a0a2 141 Pfam PF03795 YCII-related domain 1 114 1.9E-23 T 13-09-2016 IPR005545 YCII-related PMA3_RS15040 6cd98e7eb693db34a41b0c7772a7a0a2 141 PANTHER PTHR35174 2 140 1.3E-69 T 13-09-2016 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 SMART SM00283 271 539 6.1E-43 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 SUPERFAMILY SSF58104 231 540 1.44E-59 T 13-09-2016 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 PANTHER PTHR32089 105 540 1.5E-87 T 13-09-2016 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 180 3.2E-22 T 13-09-2016 IPR024478 4HB MCP domain PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 Gene3D G3DSA:1.10.287.950 294 510 7.3E-45 T 13-09-2016 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 3.5E-18 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 3.5E-18 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 3.5E-18 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 3.5E-18 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 Pfam PF00672 HAMP domain 192 258 1.7E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 538 7.0E-39 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS04575 dd84ed5972b06f453f88ff1745334bab 540 SMART SM00304 211 263 1.4E-6 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 Gene3D G3DSA:3.40.50.1700 378 458 4.0E-77 T 13-09-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 Gene3D G3DSA:3.40.50.1700 492 649 4.0E-77 T 13-09-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 161 177 2.2E-21 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 268 286 2.2E-21 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 115 134 2.2E-21 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 96 112 2.2E-21 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 198 214 2.2E-21 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 PANTHER PTHR30620 485 763 0.0 T 13-09-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 SUPERFAMILY SSF51445 29 389 1.37E-96 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 390 646 2.1E-58 T 13-09-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 PANTHER PTHR30620:SF5 485 763 0.0 T 13-09-2016 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 SMART SM01217 683 752 2.1E-27 T 13-09-2016 IPR026891 Fibronectin type III-like domain PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 PANTHER PTHR30620 31 466 0.0 T 13-09-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 Gene3D G3DSA:3.20.20.300 31 363 4.4E-101 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 SUPERFAMILY SSF52279 390 459 2.88E-57 T 13-09-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 SUPERFAMILY SSF52279 493 649 2.88E-57 T 13-09-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 PANTHER PTHR30620:SF5 31 466 0.0 T 13-09-2016 PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 Pfam PF14310 Fibronectin type III-like domain 684 752 9.8E-19 T 13-09-2016 IPR026891 Fibronectin type III-like domain PMA3_RS22860 e2b69172ef49f853f1028edb901d3e24 763 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 42 345 3.3E-80 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 PANTHER PTHR11695 16 346 7.3E-157 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 SUPERFAMILY SSF51735 149 313 6.45E-43 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 Gene3D G3DSA:3.90.180.10 6 180 2.3E-62 T 13-09-2016 IPR011032 GroES-like PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 Gene3D G3DSA:3.40.50.720 181 292 1.0E-23 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 206 - T 13-09-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 Pfam PF00107 Zinc-binding dehydrogenase 186 309 4.2E-21 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 SUPERFAMILY SSF50129 12 174 1.1E-50 T 13-09-2016 IPR011032 GroES-like PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 144 1.7E-25 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 PANTHER PTHR11695:SF261 16 346 7.3E-157 T 13-09-2016 PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 SMART SM00829 11 343 8.8E-7 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS06770 cb809239a42c44b7be82e293e8397fec 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 13-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PMA3_RS28915 3d9fed22a161b4594589d5aaea329250 71 Pfam PF03459 TOBE domain 8 67 6.6E-14 T 13-09-2016 IPR005116 Transport-associated OB, type 1 PMA3_RS28915 3d9fed22a161b4594589d5aaea329250 71 Gene3D G3DSA:2.40.50.100 6 69 4.4E-20 T 13-09-2016 PMA3_RS28915 3d9fed22a161b4594589d5aaea329250 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 7 69 4.2E-16 T 13-09-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 PMA3_RS28915 3d9fed22a161b4594589d5aaea329250 71 SUPERFAMILY SSF50331 6 69 1.24E-15 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 Pfam PF00390 Malic enzyme, N-terminal domain 20 148 8.7E-25 T 13-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 Gene3D G3DSA:3.40.50.720 161 408 6.0E-78 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 SMART SM01274 18 151 1.1E-72 T 13-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 SMART SM00919 163 399 4.4E-124 T 13-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 PIRSF PIRSF000106 38 412 4.5E-67 T 13-09-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 SUPERFAMILY SSF51735 163 408 1.08E-76 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 Pfam PF03949 Malic enzyme, NAD binding domain 165 357 3.1E-21 T 13-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 Gene3D G3DSA:3.40.50.10380 9 160 9.2E-47 T 13-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 SUPERFAMILY SSF53223 10 161 5.9E-50 T 13-09-2016 PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 13-09-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PMA3_RS09525 78d2912300b64cfa741fb8bf37be3084 414 PANTHER PTHR23406 35 404 1.1E-150 T 13-09-2016 PMA3_RS07630 43412f085785949ecd88ef3b0fda7d03 323 PANTHER PTHR30582:SF1 24 311 1.1E-89 T 13-09-2016 PMA3_RS07630 43412f085785949ecd88ef3b0fda7d03 323 Gene3D G3DSA:2.40.440.10 92 233 2.3E-32 T 13-09-2016 PMA3_RS07630 43412f085785949ecd88ef3b0fda7d03 323 Pfam PF03734 L,D-transpeptidase catalytic domain 99 232 1.0E-18 T 13-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 PMA3_RS07630 43412f085785949ecd88ef3b0fda7d03 323 SUPERFAMILY SSF141523 97 232 1.7E-29 T 13-09-2016 PMA3_RS07630 43412f085785949ecd88ef3b0fda7d03 323 PANTHER PTHR30582 24 311 1.1E-89 T 13-09-2016 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 605 37.341 T 13-09-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 99 596 1.0E-235 T 13-09-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 SUPERFAMILY SSF52540 145 393 5.68E-73 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 Pfam PF01434 Peptidase family M41 384 595 1.1E-81 T 13-09-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 PANTHER PTHR23076 1 607 0.0 T 13-09-2016 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 3.6E-46 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 Pfam PF06480 FtsH Extracellular 5 88 7.8E-12 T 13-09-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 SMART SM00382 186 325 2.7E-26 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 Gene3D G3DSA:1.10.8.60 334 407 6.8E-27 T 13-09-2016 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 Gene3D G3DSA:3.40.50.300 149 333 2.4E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 194 213 1.5E-5 T 13-09-2016 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 627 636 1.5E-5 T 13-09-2016 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 13-09-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 PMA3_RS25535 4a3c836f35a6c159882f4da2616d4de2 636 SUPERFAMILY SSF140990 404 606 8.24E-76 T 13-09-2016 PMA3_RS24345 cc4dc5e824bd63cb59fa9d53078dd223 242 Gene3D G3DSA:3.90.640.20 159 235 1.1E-10 T 13-09-2016 IPR021729 Domain of unknown function DUF3298 PMA3_RS24345 cc4dc5e824bd63cb59fa9d53078dd223 242 Pfam PF11738 Protein of unknown function (DUF3298) 159 222 7.9E-7 T 13-09-2016 IPR021729 Domain of unknown function DUF3298 PMA3_RS24345 cc4dc5e824bd63cb59fa9d53078dd223 242 Gene3D G3DSA:3.30.565.40 31 139 4.4E-6 T 13-09-2016 IPR025303 Domain of unknown function DUF4163 PMA3_RS01795 977a8b2342e99424d089fda55ed8f526 268 PIRSF PIRSF037318 2 266 7.0E-122 T 13-09-2016 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.-|UniPathway: UPA00958 PMA3_RS01795 977a8b2342e99424d089fda55ed8f526 268 SUPERFAMILY SSF56112 36 194 9.43E-10 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS01795 977a8b2342e99424d089fda55ed8f526 268 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 21 231 1.4E-61 T 13-09-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PMA3_RS10560 3fbeb5e4f6b530da3569eaeb1df843f1 596 PRINTS PR01021 OMPA domain signature 496 512 2.6E-5 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS10560 3fbeb5e4f6b530da3569eaeb1df843f1 596 PRINTS PR01021 OMPA domain signature 451 473 2.6E-5 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS10560 3fbeb5e4f6b530da3569eaeb1df843f1 596 PRINTS PR01021 OMPA domain signature 481 496 2.6E-5 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS10560 3fbeb5e4f6b530da3569eaeb1df843f1 596 SUPERFAMILY SSF103088 442 552 3.01E-30 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS10560 3fbeb5e4f6b530da3569eaeb1df843f1 596 Gene3D G3DSA:3.30.1330.60 442 554 2.2E-31 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS10560 3fbeb5e4f6b530da3569eaeb1df843f1 596 PANTHER PTHR30128 7 563 1.2E-65 T 13-09-2016 PMA3_RS10560 3fbeb5e4f6b530da3569eaeb1df843f1 596 PANTHER PTHR30128:SF11 7 563 1.2E-65 T 13-09-2016 PMA3_RS10560 3fbeb5e4f6b530da3569eaeb1df843f1 596 Pfam PF00691 OmpA family 450 546 1.4E-15 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS25085 dae5e41e2b41da8e1b08935bb3e619b9 174 PIRSF PIRSF006118 1 174 1.3E-70 T 13-09-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PMA3_RS25085 dae5e41e2b41da8e1b08935bb3e619b9 174 PANTHER PTHR21485 4 167 4.1E-56 T 13-09-2016 PMA3_RS25085 dae5e41e2b41da8e1b08935bb3e619b9 174 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 12 164 1.6E-50 T 13-09-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PMA3_RS25085 dae5e41e2b41da8e1b08935bb3e619b9 174 Pfam PF08282 haloacid dehalogenase-like hydrolase 87 145 3.3E-6 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS25085 dae5e41e2b41da8e1b08935bb3e619b9 174 SUPERFAMILY SSF56784 10 167 2.04E-42 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS25085 dae5e41e2b41da8e1b08935bb3e619b9 174 Gene3D G3DSA:3.40.50.1000 3 169 4.0E-47 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 97.9 T 13-09-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 SUPERFAMILY SSF111304 3 198 1.28E-67 T 13-09-2016 IPR023627 Recombination protein RecR PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 Gene3D G3DSA:3.40.1360.10 83 165 7.2E-4 T 13-09-2016 PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 13-09-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 SMART SM00493 80 165 6.5E-16 T 13-09-2016 IPR006171 Toprim domain PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 Pfam PF02132 RecR protein 41 78 2.8E-14 T 13-09-2016 IPR023628 Recombination protein RecR, C4-type zinc finger PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 PANTHER PTHR30446 1 200 2.4E-106 T 13-09-2016 PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 Gene3D G3DSA:1.10.150.20 11 33 5.2E-4 T 13-09-2016 PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 2.6E-70 T 13-09-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 PANTHER PTHR30446:SF0 1 200 2.4E-106 T 13-09-2016 PMA3_RS07480 1e4b8e717ff62098208d3466a5f81abc 200 Pfam PF13662 Toprim domain 82 171 2.4E-23 T 13-09-2016 IPR006171 Toprim domain PMA3_RS23045 9c4aafbf85e74095545922be1a4eb389 241 SUPERFAMILY SSF49482 9 224 6.67E-44 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS23045 9c4aafbf85e74095545922be1a4eb389 241 Pfam PF00775 Dioxygenase 33 128 2.6E-9 T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS23045 9c4aafbf85e74095545922be1a4eb389 241 Gene3D G3DSA:2.60.130.10 13 201 2.3E-41 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS23045 9c4aafbf85e74095545922be1a4eb389 241 PANTHER PTHR34315 3 224 2.5E-53 T 13-09-2016 PMA3_RS23045 9c4aafbf85e74095545922be1a4eb389 241 PANTHER PTHR34315:SF1 3 224 2.5E-53 T 13-09-2016 PMA3_RS23375 2d989b41adfa69723c762fefb6ac957e 184 PANTHER PTHR30529 6 183 1.0E-28 T 13-09-2016 PMA3_RS23375 2d989b41adfa69723c762fefb6ac957e 184 Pfam PF01292 Prokaryotic cytochrome b561 13 179 1.7E-21 T 13-09-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PMA3_RS23375 2d989b41adfa69723c762fefb6ac957e 184 SUPERFAMILY SSF81342 10 180 1.41E-27 T 13-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PMA3_RS10595 313754a142117792159da478e60b0c77 528 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 26 485 8.3E-113 T 13-09-2016 IPR017739 Type VI secretion system-associated, VCA0119 PMA3_RS10595 313754a142117792159da478e60b0c77 528 Pfam PF06812 ImpA, N-terminal, type VI secretion system 31 136 1.0E-23 T 13-09-2016 IPR010657 ImpA, N-terminal PMA3_RS10595 313754a142117792159da478e60b0c77 528 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 222 485 3.1E-83 T 13-09-2016 IPR017739 Type VI secretion system-associated, VCA0119 PMA3_RS10595 313754a142117792159da478e60b0c77 528 PANTHER PTHR37024:SF1 1 522 2.9E-129 T 13-09-2016 PMA3_RS10595 313754a142117792159da478e60b0c77 528 PANTHER PTHR37024 1 522 2.9E-129 T 13-09-2016 PMA3_RS05960 861d5a2b427b5a0b79ed04b8e1be736e 277 Gene3D G3DSA:1.10.287.1080 18 71 1.4E-6 T 13-09-2016 PMA3_RS05960 861d5a2b427b5a0b79ed04b8e1be736e 277 Gene3D G3DSA:1.10.287.1080 144 227 3.3E-14 T 13-09-2016 PMA3_RS05960 861d5a2b427b5a0b79ed04b8e1be736e 277 TIGRFAM TIGR00444 mazG: MazG family protein 10 267 2.5E-95 T 13-09-2016 IPR011551 NTP pyrophosphohydrolase MazG PMA3_RS05960 861d5a2b427b5a0b79ed04b8e1be736e 277 SUPERFAMILY SSF101386 148 245 9.72E-27 T 13-09-2016 PMA3_RS05960 861d5a2b427b5a0b79ed04b8e1be736e 277 SUPERFAMILY SSF101386 1 103 5.07E-23 T 13-09-2016 PMA3_RS05960 861d5a2b427b5a0b79ed04b8e1be736e 277 PANTHER PTHR30522:SF0 1 273 5.7E-126 T 13-09-2016 IPR011551 NTP pyrophosphohydrolase MazG PMA3_RS05960 861d5a2b427b5a0b79ed04b8e1be736e 277 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 179 236 1.1E-10 T 13-09-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PMA3_RS05960 861d5a2b427b5a0b79ed04b8e1be736e 277 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 1.7E-25 T 13-09-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PMA3_RS05960 861d5a2b427b5a0b79ed04b8e1be736e 277 PANTHER PTHR30522 1 273 5.7E-126 T 13-09-2016 PMA3_RS18985 d52fbc4843a6311ba9eb53870199b71c 331 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 13-09-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PMA3_RS18985 d52fbc4843a6311ba9eb53870199b71c 331 PANTHER PTHR10314 6 331 4.2E-162 T 13-09-2016 PMA3_RS18985 d52fbc4843a6311ba9eb53870199b71c 331 SUPERFAMILY SSF53686 21 324 5.76E-97 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS18985 d52fbc4843a6311ba9eb53870199b71c 331 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 14 330 5.8E-143 T 13-09-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PMA3_RS18985 d52fbc4843a6311ba9eb53870199b71c 331 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 313 1.5E-78 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS18985 d52fbc4843a6311ba9eb53870199b71c 331 PANTHER PTHR10314:SF30 6 331 4.2E-162 T 13-09-2016 PMA3_RS18985 d52fbc4843a6311ba9eb53870199b71c 331 Gene3D G3DSA:3.40.50.1100 79 329 1.6E-77 T 13-09-2016 PMA3_RS16265 8d3d54256af6fcfc8d159b8b08819143 146 PIRSF PIRSF015875 1 145 1.4E-40 T 13-09-2016 IPR007418 Protein of unknown function DUF474 PMA3_RS15480 8cc326070e66d7c5e1cea436b0ee04ed 205 Gene3D G3DSA:1.10.1670.10 152 202 1.9E-14 T 13-09-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PMA3_RS15480 8cc326070e66d7c5e1cea436b0ee04ed 205 PANTHER PTHR10242:SF0 8 202 1.5E-58 T 13-09-2016 PMA3_RS15480 8cc326070e66d7c5e1cea436b0ee04ed 205 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 184 3.5E-15 T 13-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PMA3_RS15480 8cc326070e66d7c5e1cea436b0ee04ed 205 SUPERFAMILY SSF48150 36 202 2.79E-41 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS15480 8cc326070e66d7c5e1cea436b0ee04ed 205 SMART SM00478 48 204 3.2E-12 T 13-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PMA3_RS15480 8cc326070e66d7c5e1cea436b0ee04ed 205 Gene3D G3DSA:1.10.340.30 39 151 2.7E-29 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS15480 8cc326070e66d7c5e1cea436b0ee04ed 205 PANTHER PTHR10242 8 202 1.5E-58 T 13-09-2016 PMA3_RS02025 5786f2a88e6ce9db9ac2f4b2d2c08a31 203 PANTHER PTHR30506:SF2 1 202 6.6E-120 T 13-09-2016 PMA3_RS02025 5786f2a88e6ce9db9ac2f4b2d2c08a31 203 PANTHER PTHR30506 1 202 6.6E-120 T 13-09-2016 PMA3_RS02025 5786f2a88e6ce9db9ac2f4b2d2c08a31 203 Pfam PF03458 UPF0126 domain 90 162 1.2E-20 T 13-09-2016 IPR005115 Uncharacterised domain UPF0126 PMA3_RS02025 5786f2a88e6ce9db9ac2f4b2d2c08a31 203 Pfam PF03458 UPF0126 domain 4 78 8.1E-20 T 13-09-2016 IPR005115 Uncharacterised domain UPF0126 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 Gene3D G3DSA:2.40.30.10 243 362 1.5E-22 T 13-09-2016 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 Pfam PF00009 Elongation factor Tu GTP binding domain 23 225 1.1E-44 T 13-09-2016 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 Pfam PF01583 Adenylylsulphate kinase 463 612 1.5E-50 T 13-09-2016 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 PRINTS PR00315 GTP-binding elongation factor signature 107 117 3.1E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 PRINTS PR00315 GTP-binding elongation factor signature 160 169 3.1E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 PRINTS PR00315 GTP-binding elongation factor signature 26 39 3.1E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 PRINTS PR00315 GTP-binding elongation factor signature 87 95 3.1E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 PRINTS PR00315 GTP-binding elongation factor signature 123 134 3.1E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 211 1.1E-13 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 SUPERFAMILY SSF52540 17 234 3.58E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 450 626 2.1E-42 T 13-09-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 SUPERFAMILY SSF50447 243 328 2.65E-25 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 Gene3D G3DSA:3.40.50.300 449 632 2.6E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 13-09-2016 IPR031157 Tr-type G domain, conserved site PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 476 54.268 T 13-09-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 SUPERFAMILY SSF50465 330 433 2.78E-33 T 13-09-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 Gene3D G3DSA:3.40.50.300 16 234 8.1E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 PANTHER PTHR23115 73 346 8.9E-74 T 13-09-2016 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 PANTHER PTHR23115 10 51 8.9E-74 T 13-09-2016 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 432 2.0E-206 T 13-09-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 462 630 31.946 T 13-09-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 PMA3_RS25010 acf9d1df61e8fd5b49a16f48bea6f27c 632 SUPERFAMILY SSF52540 462 629 8.56E-29 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24480 a710d98fe8d7c5cf5137ef998ff1cac2 366 SUPERFAMILY SSF103473 44 358 1.96E-5 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 PANTHER PTHR24220 6 241 4.1E-134 T 13-09-2016 PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 PANTHER PTHR24220:SF150 6 241 4.1E-134 T 13-09-2016 PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 Pfam PF08402 TOBE domain 274 350 7.2E-12 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 Pfam PF00005 ABC transporter 20 162 1.1E-37 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 SUPERFAMILY SSF52540 4 242 8.6E-89 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 SMART SM00382 29 212 2.1E-22 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 35 326 3.6E-107 T 13-09-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 Gene3D G3DSA:3.40.50.300 2 236 4.4E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 Gene3D G3DSA:2.40.50.140 276 343 1.1E-4 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS17865 8453c196694930a49d95c8dfcd1ef6b7 355 SUPERFAMILY SSF50331 271 351 6.8E-11 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS04895 8ddc780352842e516131aef901371387 208 Hamap MF_00052_B Ribonuclease HII [rnhB]. 16 195 37.727 T 13-09-2016 IPR022898 Ribonuclease HII GO:0004523 PMA3_RS04895 8ddc780352842e516131aef901371387 208 Pfam PF01351 Ribonuclease HII 18 194 7.3E-39 T 13-09-2016 IPR024567 Ribonuclease HII/HIII domain PMA3_RS04895 8ddc780352842e516131aef901371387 208 PANTHER PTHR10954 14 206 3.1E-78 T 13-09-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 PMA3_RS04895 8ddc780352842e516131aef901371387 208 SUPERFAMILY SSF53098 13 200 1.67E-67 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS04895 8ddc780352842e516131aef901371387 208 Gene3D G3DSA:3.30.420.10 16 155 3.6E-47 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS26135 b74e259a6e646a87e0240956164a7785 220 SUPERFAMILY SSF89562 14 181 7.46E-40 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS26135 b74e259a6e646a87e0240956164a7785 220 Gene3D G3DSA:3.50.30.40 15 180 2.2E-42 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS26135 b74e259a6e646a87e0240956164a7785 220 PANTHER PTHR33254 1 207 3.9E-37 T 13-09-2016 PMA3_RS26135 b74e259a6e646a87e0240956164a7785 220 Pfam PF03737 Demethylmenaquinone methyltransferase 18 171 2.2E-33 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS26135 b74e259a6e646a87e0240956164a7785 220 PANTHER PTHR33254:SF5 1 207 3.9E-37 T 13-09-2016 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 SUPERFAMILY SSF55874 342 486 3.67E-29 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 SUPERFAMILY SSF47384 269 325 5.3E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 SMART SM00387 383 488 7.5E-24 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 334 2.0E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 Gene3D G3DSA:3.30.565.10 329 486 4.2E-28 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 SMART SM00388 284 342 4.7E-5 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 SMART SM00304 231 283 5.2E-8 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 1.2E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 445 1.2E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 466 1.2E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 1.2E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 PANTHER PTHR24423 4 17 2.2E-42 T 13-09-2016 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 PANTHER PTHR24423:SF533 4 17 2.2E-42 T 13-09-2016 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 PANTHER PTHR24423:SF533 229 485 2.2E-42 T 13-09-2016 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 486 2.1E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 Pfam PF00672 HAMP domain 212 279 1.1E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 Gene3D G3DSA:1.10.287.130 274 328 3.9E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23105 43658dbb4596f2627634de5a6bd71c3a 489 PANTHER PTHR24423 229 485 2.2E-42 T 13-09-2016 PMA3_RS02420 41ab1afd5022f4778b01d1b0559600b3 289 Pfam PF00005 ABC transporter 64 219 1.4E-27 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS02420 41ab1afd5022f4778b01d1b0559600b3 289 Gene3D G3DSA:3.40.50.300 47 286 1.1E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02420 41ab1afd5022f4778b01d1b0559600b3 289 PANTHER PTHR24220:SF366 50 289 2.0E-141 T 13-09-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD PMA3_RS02420 41ab1afd5022f4778b01d1b0559600b3 289 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 48 289 8.6E-118 T 13-09-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD PMA3_RS02420 41ab1afd5022f4778b01d1b0559600b3 289 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 267 288 5.8E-8 T 13-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PMA3_RS02420 41ab1afd5022f4778b01d1b0559600b3 289 PANTHER PTHR24220 50 289 2.0E-141 T 13-09-2016 PMA3_RS02420 41ab1afd5022f4778b01d1b0559600b3 289 SUPERFAMILY SSF52540 48 287 6.27E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09655 05dcef020cd6bf69c140edfe19958fab 400 Gene3D G3DSA:3.90.1150.10 263 398 3.0E-36 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS09655 05dcef020cd6bf69c140edfe19958fab 400 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 205 219 - T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS09655 05dcef020cd6bf69c140edfe19958fab 400 Gene3D G3DSA:3.40.640.10 14 259 1.6E-82 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS09655 05dcef020cd6bf69c140edfe19958fab 400 SUPERFAMILY SSF53383 52 397 1.61E-94 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS09655 05dcef020cd6bf69c140edfe19958fab 400 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 14 395 3.1E-107 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS09655 05dcef020cd6bf69c140edfe19958fab 400 PIRSF PIRSF001434 1 398 1.2E-116 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS09655 05dcef020cd6bf69c140edfe19958fab 400 PANTHER PTHR11808 11 400 4.2E-134 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS14310 2a796511be138364d605d7c98098500a 240 SMART SM00345 22 80 3.1E-6 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14310 2a796511be138364d605d7c98098500a 240 Gene3D G3DSA:1.10.10.10 23 81 5.2E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14310 2a796511be138364d605d7c98098500a 240 SUPERFAMILY SSF46785 25 84 9.37E-12 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14310 2a796511be138364d605d7c98098500a 240 SMART SM00895 90 220 7.5E-13 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS14310 2a796511be138364d605d7c98098500a 240 Gene3D G3DSA:1.20.120.530 97 228 1.0E-19 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS14310 2a796511be138364d605d7c98098500a 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 80 2.9E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14310 2a796511be138364d605d7c98098500a 240 PANTHER PTHR11751 117 137 7.7E-16 T 13-09-2016 PMA3_RS14310 2a796511be138364d605d7c98098500a 240 Pfam PF07729 FCD domain 102 219 9.7E-19 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS14310 2a796511be138364d605d7c98098500a 240 PANTHER PTHR11751 26 83 7.7E-16 T 13-09-2016 PMA3_RS14310 2a796511be138364d605d7c98098500a 240 PANTHER PTHR11751:SF362 117 137 7.7E-16 T 13-09-2016 PMA3_RS14310 2a796511be138364d605d7c98098500a 240 SUPERFAMILY SSF48008 102 227 2.62E-19 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS14310 2a796511be138364d605d7c98098500a 240 PANTHER PTHR11751:SF362 26 83 7.7E-16 T 13-09-2016 PMA3_RS15385 56ef631a5e8608d3b382a47ff7c01777 252 SUPERFAMILY SSF53335 73 218 2.75E-14 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS15385 56ef631a5e8608d3b382a47ff7c01777 252 Gene3D G3DSA:3.40.50.150 79 183 2.3E-8 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS15385 56ef631a5e8608d3b382a47ff7c01777 252 Pfam PF08241 Methyltransferase domain 81 131 7.6E-5 T 13-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PMA3_RS10285 1430d93b795ea19ebaeaa7a6b42ff3b1 284 SUPERFAMILY SSF161098 86 270 2.49E-35 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS10285 1430d93b795ea19ebaeaa7a6b42ff3b1 284 Gene3D G3DSA:1.10.3720.10 86 266 3.3E-34 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS10285 1430d93b795ea19ebaeaa7a6b42ff3b1 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 266 2.9E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS10285 1430d93b795ea19ebaeaa7a6b42ff3b1 284 PANTHER PTHR30177 4 281 8.0E-78 T 13-09-2016 PMA3_RS10285 1430d93b795ea19ebaeaa7a6b42ff3b1 284 PANTHER PTHR30177:SF2 4 281 8.0E-78 T 13-09-2016 PMA3_RS01080 f9b2760378299bb58fb8f418da828d2e 212 PANTHER PTHR21235 4 208 8.0E-84 T 13-09-2016 PMA3_RS01080 f9b2760378299bb58fb8f418da828d2e 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 207 1.0E-63 T 13-09-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 PMA3_RS01080 f9b2760378299bb58fb8f418da828d2e 212 PIRSF PIRSF000495 2 210 4.6E-66 T 13-09-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 PMA3_RS01080 f9b2760378299bb58fb8f418da828d2e 212 Gene3D G3DSA:3.40.50.880 1 208 6.1E-76 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS01080 f9b2760378299bb58fb8f418da828d2e 212 Pfam PF00117 Glutamine amidotransferase class-I 6 205 6.7E-16 T 13-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PMA3_RS01080 f9b2760378299bb58fb8f418da828d2e 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 208 34.202 T 13-09-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 PMA3_RS01080 f9b2760378299bb58fb8f418da828d2e 212 SUPERFAMILY SSF52317 2 208 2.37E-53 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS01080 f9b2760378299bb58fb8f418da828d2e 212 PANTHER PTHR21235:SF1 4 208 8.0E-84 T 13-09-2016 PMA3_RS23725 c72085512fa02cd7ab6550c751daafaf 195 PIRSF PIRSF006102 1 194 1.1E-22 T 13-09-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PMA3_RS23725 c72085512fa02cd7ab6550c751daafaf 195 Pfam PF02508 Rnf-Nqr subunit, membrane protein 3 181 8.8E-17 T 13-09-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 8.0E-66 T 13-09-2016 PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PANTHER PTHR24322:SF409 161 193 2.5E-79 T 13-09-2016 PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PANTHER PTHR24322:SF409 16 145 2.5E-79 T 13-09-2016 PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 SUPERFAMILY SSF51735 10 253 4.37E-83 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PANTHER PTHR24322 161 193 2.5E-79 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PANTHER PTHR24322 16 145 2.5E-79 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 Gene3D G3DSA:3.40.50.720 3 253 4.3E-84 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 9.1E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 9.1E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 9.1E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 9.1E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 9.1E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 9.1E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.4E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.4E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15545 ce79f31946d23811e1047b204c97ca9b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.4E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18415 43e6c68abf5a3b36ac464731843da448 311 SUPERFAMILY SSF53850 93 282 7.42E-23 T 13-09-2016 PMA3_RS18415 43e6c68abf5a3b36ac464731843da448 311 Gene3D G3DSA:3.40.190.10 100 185 3.2E-7 T 13-09-2016 PMA3_RS18415 43e6c68abf5a3b36ac464731843da448 311 SUPERFAMILY SSF46785 5 98 8.03E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18415 43e6c68abf5a3b36ac464731843da448 311 PANTHER PTHR30537 1 299 1.8E-34 T 13-09-2016 PMA3_RS18415 43e6c68abf5a3b36ac464731843da448 311 Gene3D G3DSA:1.10.10.10 6 80 1.8E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18415 43e6c68abf5a3b36ac464731843da448 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.2E-14 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18415 43e6c68abf5a3b36ac464731843da448 311 Gene3D G3DSA:3.40.190.10 200 245 3.8E-4 T 13-09-2016 PMA3_RS18415 43e6c68abf5a3b36ac464731843da448 311 Pfam PF03466 LysR substrate binding domain 92 281 1.1E-19 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 5 453 3.9E-127 T 13-09-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 SUPERFAMILY SSF47384 220 302 4.12E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 SMART SM00387 345 454 8.1E-25 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 Pfam PF00672 HAMP domain 164 231 1.2E-7 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 452 1.3E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 PANTHER PTHR24423:SF354 112 119 1.3E-83 T 13-09-2016 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 PANTHER PTHR24423:SF354 176 453 1.3E-83 T 13-09-2016 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 SUPERFAMILY SSF55874 291 454 1.18E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 Gene3D G3DSA:3.30.565.10 289 454 3.0E-35 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 PANTHER PTHR24423 112 119 1.3E-83 T 13-09-2016 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 PANTHER PTHR24423 176 453 1.3E-83 T 13-09-2016 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 302 2.8E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 Gene3D G3DSA:1.10.287.130 227 288 4.9E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 5.5E-7 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 28 42 5.5E-7 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 5.5E-7 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS04190 8c3df4e8202baa3c433c23828d615cea 454 SMART SM00388 236 302 1.9E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS28950 d5403e78c84da7e67b2031402a5580a8 442 Gene3D G3DSA:2.40.160.10 27 442 2.5E-145 T 13-09-2016 IPR023614 Porin domain PMA3_RS28950 d5403e78c84da7e67b2031402a5580a8 442 Pfam PF03573 outer membrane porin, OprD family 22 440 2.8E-146 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS28950 d5403e78c84da7e67b2031402a5580a8 442 PANTHER PTHR34596 1 267 7.0E-154 T 13-09-2016 PMA3_RS28950 d5403e78c84da7e67b2031402a5580a8 442 PANTHER PTHR34596 285 442 7.0E-154 T 13-09-2016 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 SUPERFAMILY SSF51905 411 451 1.62E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 SUPERFAMILY SSF51905 24 314 1.62E-50 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 PRINTS PR00757 Flavin-containing amine oxidase signature 27 46 1.4E-11 T 13-09-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 PRINTS PR00757 Flavin-containing amine oxidase signature 432 449 1.4E-11 T 13-09-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 PRINTS PR00757 Flavin-containing amine oxidase signature 401 423 1.4E-11 T 13-09-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 Pfam PF01593 Flavin containing amine oxidoreductase 189 450 8.5E-37 T 13-09-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 Gene3D G3DSA:1.10.405.10 122 207 2.5E-7 T 13-09-2016 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 PANTHER PTHR10742:SF255 24 475 3.1E-113 T 13-09-2016 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 Pfam PF13450 NAD(P)-binding Rossmann-like domain 30 64 9.5E-10 T 13-09-2016 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 SUPERFAMILY SSF54373 295 399 1.18E-16 T 13-09-2016 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 Gene3D G3DSA:3.50.50.60 24 76 1.6E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 Gene3D G3DSA:3.50.50.60 216 312 1.6E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 Gene3D G3DSA:3.50.50.60 109 110 1.6E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 Gene3D G3DSA:3.50.50.60 410 458 1.6E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28305 204b6d28c65fa3dcf15cdacb5132ac93 586 PANTHER PTHR10742 24 475 3.1E-113 T 13-09-2016 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 314 525 6.5E-32 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 SUPERFAMILY SSF53790 312 562 3.4E-48 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 SUPERFAMILY SSF159672 6 212 7.45E-43 T 13-09-2016 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 PANTHER PTHR21091 43 61 7.0E-36 T 13-09-2016 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 PANTHER PTHR21091 281 481 7.0E-36 T 13-09-2016 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 Pfam PF11760 Cobalamin synthesis G N-terminal 51 129 1.7E-24 T 13-09-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 Gene3D G3DSA:3.40.1010.10 313 428 2.1E-26 T 13-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 PANTHER PTHR21091:SF9 43 61 7.0E-36 T 13-09-2016 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 PANTHER PTHR21091:SF9 281 481 7.0E-36 T 13-09-2016 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 315 561 3.8E-84 T 13-09-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 PMA3_RS02510 05785fb5b332788bd78174e1349f4c8b 567 Gene3D G3DSA:3.30.950.10 429 541 2.5E-10 T 13-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PMA3_RS07910 78a3e78d91bd90afe3937b65789bd20e 611 Gene3D G3DSA:3.30.300.30 477 572 5.9E-13 T 13-09-2016 PMA3_RS07910 78a3e78d91bd90afe3937b65789bd20e 611 SUPERFAMILY SSF56801 46 574 3.66E-105 T 13-09-2016 PMA3_RS07910 78a3e78d91bd90afe3937b65789bd20e 611 PANTHER PTHR24096 47 611 2.8E-202 T 13-09-2016 PMA3_RS07910 78a3e78d91bd90afe3937b65789bd20e 611 Pfam PF13193 AMP-binding enzyme C-terminal domain 485 562 9.1E-9 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS07910 78a3e78d91bd90afe3937b65789bd20e 611 Gene3D G3DSA:2.30.38.10 404 458 9.5E-6 T 13-09-2016 PMA3_RS07910 78a3e78d91bd90afe3937b65789bd20e 611 ProSitePatterns PS00455 Putative AMP-binding domain signature. 216 227 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS07910 78a3e78d91bd90afe3937b65789bd20e 611 Gene3D G3DSA:3.40.50.980 220 368 9.8E-23 T 13-09-2016 PMA3_RS07910 78a3e78d91bd90afe3937b65789bd20e 611 Pfam PF00501 AMP-binding enzyme 49 474 6.3E-63 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS07910 78a3e78d91bd90afe3937b65789bd20e 611 Gene3D G3DSA:3.40.50.980 48 219 2.3E-34 T 13-09-2016 PMA3_RS07910 78a3e78d91bd90afe3937b65789bd20e 611 PANTHER PTHR24096:SF192 47 611 2.8E-202 T 13-09-2016 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 GO:0004467|GO:0006633 PMA3_RS15880 821697df31e75b1c82e905c96a7b64ab 380 PIRSF PIRSF006078 1 378 5.1E-135 T 13-09-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PMA3_RS15880 821697df31e75b1c82e905c96a7b64ab 380 SUPERFAMILY SSF110738 1 375 4.18E-136 T 13-09-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PMA3_RS15880 821697df31e75b1c82e905c96a7b64ab 380 PANTHER PTHR21599:SF4 1 378 2.5E-161 T 13-09-2016 PMA3_RS15880 821697df31e75b1c82e905c96a7b64ab 380 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 7.6E-152 T 13-09-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PMA3_RS15880 821697df31e75b1c82e905c96a7b64ab 380 Gene3D G3DSA:3.90.1510.10 42 275 3.4E-94 T 13-09-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 PMA3_RS15880 821697df31e75b1c82e905c96a7b64ab 380 Pfam PF02595 Glycerate kinase family 3 373 3.1E-147 T 13-09-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PMA3_RS15880 821697df31e75b1c82e905c96a7b64ab 380 PANTHER PTHR21599 1 378 2.5E-161 T 13-09-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 PIRSF PIRSF002158 12 274 1.8E-99 T 13-09-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 Gene3D G3DSA:2.30.30.30 120 196 2.7E-31 T 13-09-2016 IPR014722 Ribosomal protein L2 domain 2 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 SMART SM01382 125 253 1.9E-92 T 13-09-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 PANTHER PTHR13691 1 274 7.6E-143 T 13-09-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 Gene3D G3DSA:4.10.950.10 197 273 1.3E-34 T 13-09-2016 IPR014726 Ribosomal protein L2, domain 3 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 6.3E-129 T 13-09-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 13-09-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 SUPERFAMILY SSF50249 2 126 3.29E-47 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 47.232 T 13-09-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.8E-32 T 13-09-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 4.2E-56 T 13-09-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 SMART SM01383 42 119 1.9E-42 T 13-09-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 Gene3D G3DSA:2.40.50.140 1 115 8.5E-50 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS27250 d15f92bac8469b51589486fdb2e203c4 274 SUPERFAMILY SSF50104 127 273 3.49E-60 T 13-09-2016 IPR008991 Translation protein SH3-like domain PMA3_RS03545 5facde29ceb80bc888be81c53255b1b4 90 Gene3D G3DSA:1.10.150.20 2 88 5.8E-29 T 13-09-2016 PMA3_RS03545 5facde29ceb80bc888be81c53255b1b4 90 PANTHER PTHR36121 1 89 2.9E-31 T 13-09-2016 PMA3_RS03545 5facde29ceb80bc888be81c53255b1b4 90 PANTHER PTHR36121:SF1 1 89 2.9E-31 T 13-09-2016 PMA3_RS03545 5facde29ceb80bc888be81c53255b1b4 90 Pfam PF04994 TfoX C-terminal domain 1 80 6.5E-31 T 13-09-2016 IPR007077 TfoX, C-terminal PMA3_RS07580 f32bcf005003d3b010c648efda4c120e 401 SUPERFAMILY SSF56645 1 258 1.57E-70 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS07580 f32bcf005003d3b010c648efda4c120e 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 245 393 3.2E-33 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS07580 f32bcf005003d3b010c648efda4c120e 401 Gene3D G3DSA:2.40.110.10 131 234 1.4E-39 T 13-09-2016 PMA3_RS07580 f32bcf005003d3b010c648efda4c120e 401 Gene3D G3DSA:1.20.140.10 235 399 1.6E-47 T 13-09-2016 PMA3_RS07580 f32bcf005003d3b010c648efda4c120e 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 128 2.0E-17 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS07580 f32bcf005003d3b010c648efda4c120e 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 233 4.7E-19 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS07580 f32bcf005003d3b010c648efda4c120e 401 Gene3D G3DSA:1.10.540.10 1 130 1.7E-37 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS07580 f32bcf005003d3b010c648efda4c120e 401 PANTHER PTHR10909 1 396 1.9E-237 T 13-09-2016 PMA3_RS07580 f32bcf005003d3b010c648efda4c120e 401 SUPERFAMILY SSF47203 243 399 5.48E-44 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS07580 f32bcf005003d3b010c648efda4c120e 401 PANTHER PTHR10909:SF282 1 396 1.9E-237 T 13-09-2016 PMA3_RS23465 5451b5227867f5921bb6ddbf59d083c8 507 SUPERFAMILY SSF117457 317 487 2.35E-64 T 13-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PMA3_RS23465 5451b5227867f5921bb6ddbf59d083c8 507 PANTHER PTHR30389 1 507 0.0 T 13-09-2016 PMA3_RS23465 5451b5227867f5921bb6ddbf59d083c8 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.4E-101 T 13-09-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PMA3_RS23465 5451b5227867f5921bb6ddbf59d083c8 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 286 1.6E-65 T 13-09-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PMA3_RS23465 5451b5227867f5921bb6ddbf59d083c8 507 Pfam PF05683 Fumarase C-terminus 289 488 3.1E-81 T 13-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PMA3_RS23465 5451b5227867f5921bb6ddbf59d083c8 507 PIRSF PIRSF001394 1 506 3.8E-225 T 13-09-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS23465 5451b5227867f5921bb6ddbf59d083c8 507 PANTHER PTHR30389:SF1 1 507 0.0 T 13-09-2016 PMA3_RS23465 5451b5227867f5921bb6ddbf59d083c8 507 Gene3D G3DSA:3.20.130.10 305 487 3.6E-75 T 13-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PMA3_RS23465 5451b5227867f5921bb6ddbf59d083c8 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 486 1.7E-51 T 13-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PMA3_RS02820 a64da3d140d2f2888ce58ab354c30a15 496 PANTHER PTHR11699 1 496 0.0 T 13-09-2016 PMA3_RS02820 a64da3d140d2f2888ce58ab354c30a15 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS02820 a64da3d140d2f2888ce58ab354c30a15 496 Pfam PF00171 Aldehyde dehydrogenase family 30 490 8.7E-166 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS02820 a64da3d140d2f2888ce58ab354c30a15 496 Gene3D G3DSA:3.40.605.10 19 278 1.4E-91 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS02820 a64da3d140d2f2888ce58ab354c30a15 496 PANTHER PTHR11699:SF210 1 496 0.0 T 13-09-2016 PMA3_RS02820 a64da3d140d2f2888ce58ab354c30a15 496 Gene3D G3DSA:3.40.309.10 279 466 7.0E-66 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS02820 a64da3d140d2f2888ce58ab354c30a15 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS02820 a64da3d140d2f2888ce58ab354c30a15 496 SUPERFAMILY SSF53720 15 494 1.96E-164 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 TIGRFAM TIGR03186 AKGDH_not_PDH: alpha-ketoglutarate dehydrogenase 16 898 0.0 T 13-09-2016 IPR017600 Alpha-ketoglutarate dehydrogenase PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PANTHER PTHR11624 374 461 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PANTHER PTHR11624 799 881 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PIRSF PIRSF000156 6 899 0.0 T 13-09-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 Gene3D G3DSA:3.40.50.920 718 897 1.2E-63 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 143 311 3.4E-5 T 13-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PANTHER PTHR11624:SF67 564 780 0.0 T 13-09-2016 PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PANTHER PTHR11624:SF67 482 546 0.0 T 13-09-2016 PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PANTHER PTHR11624 81 305 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PANTHER PTHR11624 564 780 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PANTHER PTHR11624 482 546 0.0 T 13-09-2016 IPR033247 Transketolase family PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PANTHER PTHR11624:SF67 81 305 0.0 T 13-09-2016 PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 17 898 0.0 T 13-09-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PANTHER PTHR11624:SF67 374 461 0.0 T 13-09-2016 PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 PANTHER PTHR11624:SF67 799 881 0.0 T 13-09-2016 PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 SUPERFAMILY SSF52518 484 710 4.71E-92 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 SUPERFAMILY SSF52518 64 478 2.85E-123 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 Gene3D G3DSA:3.40.50.970 64 477 9.4E-138 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 Gene3D G3DSA:3.40.50.970 484 715 2.3E-109 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS16500 fdff39de1763bca83ab5fa56a05aeef9 899 SUPERFAMILY SSF52922 712 897 3.36E-47 T 13-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PMA3_RS11260 3527d5c5a3ddd27cc3500067e63e4da0 493 PANTHER PTHR11699 10 483 2.7E-235 T 13-09-2016 PMA3_RS11260 3527d5c5a3ddd27cc3500067e63e4da0 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS11260 3527d5c5a3ddd27cc3500067e63e4da0 493 Pfam PF00171 Aldehyde dehydrogenase family 14 477 1.1E-173 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS11260 3527d5c5a3ddd27cc3500067e63e4da0 493 Gene3D G3DSA:3.40.309.10 266 442 5.9E-70 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS11260 3527d5c5a3ddd27cc3500067e63e4da0 493 Gene3D G3DSA:3.40.605.10 5 265 4.3E-98 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS11260 3527d5c5a3ddd27cc3500067e63e4da0 493 SUPERFAMILY SSF53720 5 481 4.97E-170 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS03935 fd755cbd88835b9ffd135f84db885e7f 560 PANTHER PTHR24096 13 560 0.0 T 13-09-2016 PMA3_RS03935 fd755cbd88835b9ffd135f84db885e7f 560 PANTHER PTHR24096:SF136 13 560 0.0 T 13-09-2016 PMA3_RS03935 fd755cbd88835b9ffd135f84db885e7f 560 Gene3D G3DSA:2.30.38.10 365 441 2.5E-18 T 13-09-2016 PMA3_RS03935 fd755cbd88835b9ffd135f84db885e7f 560 Gene3D G3DSA:3.30.300.30 442 543 2.1E-24 T 13-09-2016 PMA3_RS03935 fd755cbd88835b9ffd135f84db885e7f 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 457 536 6.9E-17 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS03935 fd755cbd88835b9ffd135f84db885e7f 560 Pfam PF00501 AMP-binding enzyme 30 447 2.7E-84 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS03935 fd755cbd88835b9ffd135f84db885e7f 560 Gene3D G3DSA:3.40.50.980 193 349 3.7E-34 T 13-09-2016 PMA3_RS03935 fd755cbd88835b9ffd135f84db885e7f 560 Gene3D G3DSA:3.40.50.980 51 192 3.5E-29 T 13-09-2016 PMA3_RS03935 fd755cbd88835b9ffd135f84db885e7f 560 SUPERFAMILY SSF56801 23 544 4.84E-127 T 13-09-2016 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 Pfam PF02811 PHP domain 7 123 5.5E-17 T 13-09-2016 IPR004013 PHP domain GO:0003824 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 SUPERFAMILY SSF89550 120 187 3.34E-12 T 13-09-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 SUPERFAMILY SSF89550 5 82 3.34E-12 T 13-09-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 692 1.2E-147 T 13-09-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 Pfam PF14579 Helix-hairpin-helix motif 766 854 1.9E-21 T 13-09-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 Gene3D G3DSA:3.20.20.140 6 85 4.1E-10 T 13-09-2016 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 997 1.2E-7 T 13-09-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 5 1024 13.764 T 13-09-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 PANTHER PTHR32294 1 1014 0.0 T 13-09-2016 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 SMART SM00481 6 73 3.2E-10 T 13-09-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 PANTHER PTHR32294:SF4 1 1014 0.0 T 13-09-2016 PMA3_RS12070 f8a7ae46428de5afc22bcf7171255fe7 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 969 6.4E-167 T 13-09-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 Pfam PF13721 SecD export protein N-terminal TM region 2 106 1.7E-34 T 13-09-2016 IPR027398 SecD export protein N-terminal TM domain PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 344 601 1.8E-67 T 13-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 621 49.969 T 13-09-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 126 608 1.4E-129 T 13-09-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PANTHER PTHR30081:SF1 1 176 1.1E-194 T 13-09-2016 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PANTHER PTHR30081 403 620 1.1E-194 T 13-09-2016 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PRINTS PR00702 Acriflavin resistance protein family signature 585 608 6.4E-5 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PRINTS PR00702 Acriflavin resistance protein family signature 482 503 6.4E-5 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PRINTS PR00702 Acriflavin resistance protein family signature 510 534 6.4E-5 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 Pfam PF02355 Protein export membrane protein 445 608 1.3E-15 T 13-09-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PANTHER PTHR30081 229 287 1.1E-194 T 13-09-2016 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 Gene3D G3DSA:1.20.1640.10 463 615 7.2E-25 T 13-09-2016 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PANTHER PTHR30081:SF1 403 620 1.1E-194 T 13-09-2016 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PANTHER PTHR30081 1 176 1.1E-194 T 13-09-2016 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PANTHER PTHR30081:SF1 312 384 1.1E-194 T 13-09-2016 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PANTHER PTHR30081:SF1 229 287 1.1E-194 T 13-09-2016 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 Pfam PF07549 SecD/SecF GG Motif 118 143 1.5E-6 T 13-09-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 PANTHER PTHR30081 312 384 1.1E-194 T 13-09-2016 PMA3_RS24305 9ea7792d23b055ec605212054b0ebfaf 622 SUPERFAMILY SSF82866 418 613 4.05E-43 T 13-09-2016 PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 1.7E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 1.7E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 1.7E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 457 7.0E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 Pfam PF00672 HAMP domain 177 239 7.2E-9 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 Gene3D G3DSA:3.30.565.10 321 458 1.2E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 SMART SM00388 244 309 2.0E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 Pfam PF08521 Two-component sensor kinase N-terminal 19 167 1.5E-40 T 13-09-2016 IPR013727 Two-component sensor kinase, N-terminal PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 309 3.6E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 SMART SM00387 357 462 1.1E-29 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 SUPERFAMILY SSF55874 298 458 6.68E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 PANTHER PTHR24423:SF474 185 458 2.2E-66 T 13-09-2016 PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 SUPERFAMILY SSF47384 227 309 3.14E-18 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 PANTHER PTHR24423 185 458 2.2E-66 T 13-09-2016 PMA3_RS22575 461b3373778e91bc58b9a185e154c178 462 Gene3D G3DSA:1.10.287.130 236 305 2.7E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02985 1e6148b0c7ad66c50975e31999fd4340 359 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 359 40.575 T 13-09-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 PMA3_RS02985 1e6148b0c7ad66c50975e31999fd4340 359 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 341 351 - T 13-09-2016 IPR030391 RNA methyltransferase TrmA, conserved site PMA3_RS02985 1e6148b0c7ad66c50975e31999fd4340 359 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 8 359 8.4E-176 T 13-09-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 PMA3_RS02985 1e6148b0c7ad66c50975e31999fd4340 359 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 292 321 - T 13-09-2016 IPR030390 RNA methyltransferase TrmA, active site PMA3_RS02985 1e6148b0c7ad66c50975e31999fd4340 359 PANTHER PTHR11061:SF25 8 359 2.9E-180 T 13-09-2016 PMA3_RS02985 1e6148b0c7ad66c50975e31999fd4340 359 SUPERFAMILY SSF53335 7 358 1.63E-52 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS02985 1e6148b0c7ad66c50975e31999fd4340 359 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 8 359 1.8E-175 T 13-09-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PMA3_RS02985 1e6148b0c7ad66c50975e31999fd4340 359 PANTHER PTHR11061 8 359 2.9E-180 T 13-09-2016 PMA3_RS02985 1e6148b0c7ad66c50975e31999fd4340 359 Gene3D G3DSA:3.40.50.150 149 358 2.7E-44 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS15695 19d3d7e8ced313b703ee2ff2837180dc 216 PANTHER PTHR14136 41 205 9.1E-35 T 13-09-2016 PMA3_RS15695 19d3d7e8ced313b703ee2ff2837180dc 216 SUPERFAMILY SSF141571 41 208 1.02E-39 T 13-09-2016 PMA3_RS15695 19d3d7e8ced313b703ee2ff2837180dc 216 PANTHER PTHR14136:SF0 41 205 9.1E-35 T 13-09-2016 PMA3_RS15695 19d3d7e8ced313b703ee2ff2837180dc 216 Gene3D G3DSA:3.80.10.10 44 193 1.0E-4 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS15695 19d3d7e8ced313b703ee2ff2837180dc 216 Pfam PF00805 Pentapeptide repeats (8 copies) 42 80 1.8E-11 T 13-09-2016 IPR001646 Pentapeptide repeat PMA3_RS15695 19d3d7e8ced313b703ee2ff2837180dc 216 Pfam PF00805 Pentapeptide repeats (8 copies) 121 155 2.2E-9 T 13-09-2016 IPR001646 Pentapeptide repeat PMA3_RS15695 19d3d7e8ced313b703ee2ff2837180dc 216 Pfam PF00805 Pentapeptide repeats (8 copies) 172 207 4.8E-8 T 13-09-2016 IPR001646 Pentapeptide repeat PMA3_RS15695 19d3d7e8ced313b703ee2ff2837180dc 216 Pfam PF00805 Pentapeptide repeats (8 copies) 82 109 3.1E-6 T 13-09-2016 IPR001646 Pentapeptide repeat PMA3_RS14230 29b22346ac23f84248c2d6dfd7fdf647 143 PANTHER PTHR36569 10 62 3.4E-22 T 13-09-2016 PMA3_RS14230 29b22346ac23f84248c2d6dfd7fdf647 143 PANTHER PTHR36569:SF1 10 62 3.4E-22 T 13-09-2016 PMA3_RS14230 29b22346ac23f84248c2d6dfd7fdf647 143 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 11 31 6.8E-8 T 13-09-2016 IPR019626 Stress-induced protein, KGG, repeat PMA3_RS14230 29b22346ac23f84248c2d6dfd7fdf647 143 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 33 53 7.2E-10 T 13-09-2016 IPR019626 Stress-induced protein, KGG, repeat PMA3_RS23090 7c54ecdc9076209624321cc41f725d0f 302 Gene3D G3DSA:1.10.3720.10 68 294 1.7E-51 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23090 7c54ecdc9076209624321cc41f725d0f 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 292 4.2E-13 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23090 7c54ecdc9076209624321cc41f725d0f 302 PANTHER PTHR30193 1 300 3.5E-142 T 13-09-2016 PMA3_RS23090 7c54ecdc9076209624321cc41f725d0f 302 SUPERFAMILY SSF161098 62 288 7.19E-48 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23090 7c54ecdc9076209624321cc41f725d0f 302 PANTHER PTHR30193:SF29 1 300 3.5E-142 T 13-09-2016 PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 SUPERFAMILY SSF53448 1 281 7.15E-71 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 Gene3D G3DSA:3.90.550.10 1 270 2.3E-92 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 Pfam PF00483 Nucleotidyl transferase 3 286 3.2E-73 T 13-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 468 1.6E-221 T 13-09-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 PANTHER PTHR12526:SF387 351 470 8.0E-109 T 13-09-2016 PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 PANTHER PTHR12526:SF387 151 288 8.0E-109 T 13-09-2016 PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 PANTHER PTHR12526 151 288 8.0E-109 T 13-09-2016 PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 PANTHER PTHR12526 351 470 8.0E-109 T 13-09-2016 PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 Pfam PF01050 Mannose-6-phosphate isomerase 314 464 4.8E-74 T 13-09-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 Gene3D G3DSA:2.60.120.10 356 469 2.8E-46 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS24660 2dd91999d5904b2018c65b7e91fa2c46 483 SUPERFAMILY SSF51182 184 470 3.15E-84 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS18055 570687f676663d49f580f26a69fb54b3 489 SUPERFAMILY SSF56425 286 429 4.45E-20 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS18055 570687f676663d49f580f26a69fb54b3 489 Gene3D G3DSA:3.90.700.10 285 420 2.7E-18 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS18055 570687f676663d49f580f26a69fb54b3 489 SUPERFAMILY SSF51905 2 271 3.79E-39 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18055 570687f676663d49f580f26a69fb54b3 489 SUPERFAMILY SSF51905 428 485 3.79E-39 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18055 570687f676663d49f580f26a69fb54b3 489 PANTHER PTHR11632 4 486 3.6E-139 T 13-09-2016 PMA3_RS18055 570687f676663d49f580f26a69fb54b3 489 Gene3D G3DSA:3.50.50.60 4 254 7.6E-55 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18055 570687f676663d49f580f26a69fb54b3 489 Gene3D G3DSA:3.50.50.60 425 485 7.6E-55 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18055 570687f676663d49f580f26a69fb54b3 489 Pfam PF00890 FAD binding domain 5 462 4.6E-42 T 13-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PMA3_RS18055 570687f676663d49f580f26a69fb54b3 489 PANTHER PTHR11632:SF49 4 486 3.6E-139 T 13-09-2016 PMA3_RS23720 78edd4b7d55269c0f330a11de0b83218 203 PIRSF PIRSF006091 3 203 1.4E-47 T 13-09-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PMA3_RS23720 78edd4b7d55269c0f330a11de0b83218 203 SMART SM00900 97 189 5.5E-29 T 13-09-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PMA3_RS23720 78edd4b7d55269c0f330a11de0b83218 203 Pfam PF04205 FMN-binding domain 97 186 4.7E-16 T 13-09-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PMA3_RS23720 78edd4b7d55269c0f330a11de0b83218 203 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 8 191 4.1E-43 T 13-09-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PMA3_RS23720 78edd4b7d55269c0f330a11de0b83218 203 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 1 191 19.069 T 13-09-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PMA3_RS23720 78edd4b7d55269c0f330a11de0b83218 203 PANTHER PTHR36118:SF1 1 197 1.1E-38 T 13-09-2016 PMA3_RS23720 78edd4b7d55269c0f330a11de0b83218 203 PANTHER PTHR36118 1 197 1.1E-38 T 13-09-2016 PMA3_RS11350 9f7624dc32189689185f4636526e84c0 546 Pfam PF01435 Peptidase family M48 112 294 3.2E-12 T 13-09-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PMA3_RS11350 9f7624dc32189689185f4636526e84c0 546 PANTHER PTHR10120 279 316 5.7E-20 T 13-09-2016 PMA3_RS11350 9f7624dc32189689185f4636526e84c0 546 Gene3D G3DSA:3.30.2010.10 49 139 4.6E-9 T 13-09-2016 PMA3_RS11350 9f7624dc32189689185f4636526e84c0 546 PANTHER PTHR10120:SF19 279 316 5.7E-20 T 13-09-2016 PMA3_RS11350 9f7624dc32189689185f4636526e84c0 546 PANTHER PTHR10120:SF19 10 252 5.7E-20 T 13-09-2016 PMA3_RS11350 9f7624dc32189689185f4636526e84c0 546 PANTHER PTHR10120 10 252 5.7E-20 T 13-09-2016 PMA3_RS23900 1fca3cb1a68ab76b9c33c4ddb64edf1d 143 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 13-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PMA3_RS23900 1fca3cb1a68ab76b9c33c4ddb64edf1d 143 SUPERFAMILY SSF55811 7 133 4.2E-22 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS23900 1fca3cb1a68ab76b9c33c4ddb64edf1d 143 Gene3D G3DSA:3.90.79.10 12 131 7.8E-20 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS23900 1fca3cb1a68ab76b9c33c4ddb64edf1d 143 Pfam PF00293 NUDIX domain 12 116 1.5E-11 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS23900 1fca3cb1a68ab76b9c33c4ddb64edf1d 143 PANTHER PTHR22769 9 131 3.1E-34 T 13-09-2016 PMA3_RS23900 1fca3cb1a68ab76b9c33c4ddb64edf1d 143 PANTHER PTHR22769:SF5 9 131 3.1E-34 T 13-09-2016 PMA3_RS17600 a0bbd10c9ddf2e9fcfcc5ac1993a298a 157 Gene3D G3DSA:3.30.700.10 8 76 2.3E-6 T 13-09-2016 PMA3_RS17600 a0bbd10c9ddf2e9fcfcc5ac1993a298a 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.4E-8 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS17600 a0bbd10c9ddf2e9fcfcc5ac1993a298a 157 SUPERFAMILY SSF54523 8 128 1.99E-17 T 13-09-2016 PMA3_RS17600 a0bbd10c9ddf2e9fcfcc5ac1993a298a 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS17600 a0bbd10c9ddf2e9fcfcc5ac1993a298a 157 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 1.2E-6 T 13-09-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PMA3_RS17600 a0bbd10c9ddf2e9fcfcc5ac1993a298a 157 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 1.2E-6 T 13-09-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PMA3_RS17600 a0bbd10c9ddf2e9fcfcc5ac1993a298a 157 PANTHER PTHR30093:SF3 1 74 1.5E-12 T 13-09-2016 PMA3_RS17600 a0bbd10c9ddf2e9fcfcc5ac1993a298a 157 Pfam PF13633 Prokaryotic N-terminal methylation site 5 30 2.7E-8 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS17600 a0bbd10c9ddf2e9fcfcc5ac1993a298a 157 PANTHER PTHR30093 1 74 1.5E-12 T 13-09-2016 PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 2.0E-5 T 13-09-2016 PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 SUPERFAMILY SSF51735 1 251 1.09E-72 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 PANTHER PTHR24322 10 194 4.5E-47 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 Gene3D G3DSA:3.40.50.720 2 251 5.8E-80 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 8.7E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 8.7E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 8.7E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 8.7E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 8.7E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.7E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 4.4E-56 T 13-09-2016 PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 8.4E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 8.4E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS23690 779b13f1b30e2c11b54698e344413d37 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.4E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 271 313 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 Pfam PF12833 Helix-turn-helix domain 240 318 1.2E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 Pfam PF01965 DJ-1/PfpI family 13 184 1.7E-17 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 SUPERFAMILY SSF52317 13 201 7.05E-40 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 SUPERFAMILY SSF46689 217 268 3.63E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 SMART SM00342 234 317 1.7E-27 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 PANTHER PTHR11019:SF68 54 326 1.2E-38 T 13-09-2016 PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 PANTHER PTHR11019 54 326 1.2E-38 T 13-09-2016 PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 Gene3D G3DSA:1.10.10.60 273 322 2.9E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 301 3.2E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 317 3.2E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 Gene3D G3DSA:1.10.10.60 224 272 1.9E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 Gene3D G3DSA:3.40.50.880 13 223 2.1E-35 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS10060 213c072a3bbf389ea69cbf2c3a64bee7 341 SUPERFAMILY SSF46689 270 321 8.06E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS08595 e7e571de7da41a8d3dd61f94c95d19f9 146 PANTHER PTHR31964 1 141 3.9E-31 T 13-09-2016 PMA3_RS08595 e7e571de7da41a8d3dd61f94c95d19f9 146 PRINTS PR01438 Universal stress protein signature 119 141 1.2E-14 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS08595 e7e571de7da41a8d3dd61f94c95d19f9 146 PRINTS PR01438 Universal stress protein signature 3 21 1.2E-14 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS08595 e7e571de7da41a8d3dd61f94c95d19f9 146 PRINTS PR01438 Universal stress protein signature 102 114 1.2E-14 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS08595 e7e571de7da41a8d3dd61f94c95d19f9 146 Pfam PF00582 Universal stress protein family 3 141 2.8E-31 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS08595 e7e571de7da41a8d3dd61f94c95d19f9 146 SUPERFAMILY SSF52402 3 141 2.01E-35 T 13-09-2016 PMA3_RS08595 e7e571de7da41a8d3dd61f94c95d19f9 146 PIRSF PIRSF006276 1 144 3.0E-47 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS08595 e7e571de7da41a8d3dd61f94c95d19f9 146 PANTHER PTHR31964:SF42 1 141 3.9E-31 T 13-09-2016 PMA3_RS08595 e7e571de7da41a8d3dd61f94c95d19f9 146 Gene3D G3DSA:3.40.50.620 3 143 1.4E-38 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS16760 5e42fc70148cf45c0b77939e05fd864e 678 SUPERFAMILY SSF53649 290 661 3.2E-55 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS16760 5e42fc70148cf45c0b77939e05fd864e 678 Gene3D G3DSA:3.40.720.10 292 591 2.5E-40 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS16760 5e42fc70148cf45c0b77939e05fd864e 678 Pfam PF00884 Sulfatase 292 579 4.1E-38 T 13-09-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PMA3_RS16760 5e42fc70148cf45c0b77939e05fd864e 678 PIRSF PIRSF005091 17 675 2.1E-57 T 13-09-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 PMA3_RS16760 5e42fc70148cf45c0b77939e05fd864e 678 PANTHER PTHR10342 289 603 6.3E-45 T 13-09-2016 PMA3_RS16760 5e42fc70148cf45c0b77939e05fd864e 678 PANTHER PTHR10342:SF236 289 603 6.3E-45 T 13-09-2016 PMA3_RS15610 232ffad9c7b5cfe4018aa8298993c38e 297 PANTHER PTHR10907 1 293 5.3E-70 T 13-09-2016 PMA3_RS15610 232ffad9c7b5cfe4018aa8298993c38e 297 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 245 263 1.4E-26 T 13-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) PMA3_RS15610 232ffad9c7b5cfe4018aa8298993c38e 297 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 93 114 1.4E-26 T 13-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) PMA3_RS15610 232ffad9c7b5cfe4018aa8298993c38e 297 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 203 220 1.4E-26 T 13-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) PMA3_RS15610 232ffad9c7b5cfe4018aa8298993c38e 297 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 14 31 1.4E-26 T 13-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) PMA3_RS15610 232ffad9c7b5cfe4018aa8298993c38e 297 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 138 160 1.4E-26 T 13-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) PMA3_RS15610 232ffad9c7b5cfe4018aa8298993c38e 297 Gene3D G3DSA:2.120.10.30 2 293 2.7E-86 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS15610 232ffad9c7b5cfe4018aa8298993c38e 297 SUPERFAMILY SSF63829 6 293 4.36E-61 T 13-09-2016 PMA3_RS15610 232ffad9c7b5cfe4018aa8298993c38e 297 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 13 263 2.9E-76 T 13-09-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region PMA3_RS15610 232ffad9c7b5cfe4018aa8298993c38e 297 PANTHER PTHR10907:SF47 1 293 5.3E-70 T 13-09-2016 PMA3_RS05880 3ccc47e9eb41e1cd6b473cc2bb170b6f 274 PIRSF PIRSF004976 2 272 1.5E-72 T 13-09-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 PMA3_RS05880 3ccc47e9eb41e1cd6b473cc2bb170b6f 274 Pfam PF01171 PP-loop family 34 197 5.8E-14 T 13-09-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PMA3_RS05880 3ccc47e9eb41e1cd6b473cc2bb170b6f 274 PANTHER PTHR11807 5 262 2.6E-117 T 13-09-2016 PMA3_RS05880 3ccc47e9eb41e1cd6b473cc2bb170b6f 274 SUPERFAMILY SSF52402 21 251 4.82E-55 T 13-09-2016 PMA3_RS05880 3ccc47e9eb41e1cd6b473cc2bb170b6f 274 PANTHER PTHR11807:SF16 5 262 2.6E-117 T 13-09-2016 PMA3_RS05880 3ccc47e9eb41e1cd6b473cc2bb170b6f 274 Gene3D G3DSA:3.40.50.620 17 197 8.6E-22 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS05880 3ccc47e9eb41e1cd6b473cc2bb170b6f 274 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 1 264 57.448 T 13-09-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 PMA3_RS27060 bcd6dbcce93bb0fc92f39d5e4ad1f139 252 Gene3D G3DSA:3.40.50.1820 4 239 1.2E-35 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS27060 bcd6dbcce93bb0fc92f39d5e4ad1f139 252 PANTHER PTHR22946:SF0 4 245 3.6E-38 T 13-09-2016 PMA3_RS27060 bcd6dbcce93bb0fc92f39d5e4ad1f139 252 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 85 115 - T 13-09-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 PMA3_RS27060 bcd6dbcce93bb0fc92f39d5e4ad1f139 252 PANTHER PTHR22946 4 245 3.6E-38 T 13-09-2016 PMA3_RS27060 bcd6dbcce93bb0fc92f39d5e4ad1f139 252 SUPERFAMILY SSF53474 4 239 1.16E-38 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS27060 bcd6dbcce93bb0fc92f39d5e4ad1f139 252 Pfam PF00326 Prolyl oligopeptidase family 52 240 1.9E-11 T 13-09-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PMA3_RS02915 427e72530b6ad75f9e09e74d476a5311 197 Gene3D G3DSA:3.40.50.1000 6 20 1.8E-29 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS02915 427e72530b6ad75f9e09e74d476a5311 197 Gene3D G3DSA:3.40.50.1000 69 180 1.8E-29 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS02915 427e72530b6ad75f9e09e74d476a5311 197 PANTHER PTHR18901:SF25 1 186 7.6E-85 T 13-09-2016 PMA3_RS02915 427e72530b6ad75f9e09e74d476a5311 197 SUPERFAMILY SSF56784 6 185 2.34E-36 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS02915 427e72530b6ad75f9e09e74d476a5311 197 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 170 1.1E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS02915 427e72530b6ad75f9e09e74d476a5311 197 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 10 164 3.7E-9 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS02915 427e72530b6ad75f9e09e74d476a5311 197 PANTHER PTHR18901 1 186 7.6E-85 T 13-09-2016 PMA3_RS02915 427e72530b6ad75f9e09e74d476a5311 197 Pfam PF13419 Haloacid dehalogenase-like hydrolase 67 170 2.0E-16 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS09515 249b65a89535926d79061392095fd3b1 337 PANTHER PTHR11835 2 337 2.7E-167 T 13-09-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PMA3_RS09515 249b65a89535926d79061392095fd3b1 337 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 330 3.3E-101 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS09515 249b65a89535926d79061392095fd3b1 337 Gene3D G3DSA:3.40.718.10 2 335 2.4E-130 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS09515 249b65a89535926d79061392095fd3b1 337 SMART SM01329 4 331 2.3E-175 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS09515 249b65a89535926d79061392095fd3b1 337 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 226 245 - T 13-09-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PMA3_RS09515 249b65a89535926d79061392095fd3b1 337 SUPERFAMILY SSF53659 2 335 9.41E-123 T 13-09-2016 PMA3_RS25210 28b60d5bd975ef4eac8356c1820cc84b 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.2E-16 T 13-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PMA3_RS25210 28b60d5bd975ef4eac8356c1820cc84b 95 PANTHER PTHR15004:SF0 1 95 3.2E-26 T 13-09-2016 PMA3_RS25210 28b60d5bd975ef4eac8356c1820cc84b 95 PANTHER PTHR15004 1 95 3.2E-26 T 13-09-2016 PMA3_RS25210 28b60d5bd975ef4eac8356c1820cc84b 95 SUPERFAMILY SSF141000 3 93 3.27E-27 T 13-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PMA3_RS25210 28b60d5bd975ef4eac8356c1820cc84b 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.851 T 13-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PMA3_RS25210 28b60d5bd975ef4eac8356c1820cc84b 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 4.8E-27 T 13-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 PANTHER PTHR30346 1 292 1.2E-89 T 13-09-2016 PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 PANTHER PTHR30346:SF0 1 292 1.2E-89 T 13-09-2016 PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 SUPERFAMILY SSF53850 92 292 2.33E-30 T 13-09-2016 PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 Gene3D G3DSA:3.40.190.10 175 266 1.4E-34 T 13-09-2016 PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 Gene3D G3DSA:3.40.190.10 87 174 1.8E-29 T 13-09-2016 PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 Gene3D G3DSA:1.10.10.10 1 83 3.6E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 Pfam PF03466 LysR substrate binding domain 91 289 1.8E-34 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 SUPERFAMILY SSF46785 1 82 1.92E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10955 06e4de50e26e3e0009cf1a2b21e523f6 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-21 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS20515 96cbdbb7c68bdc1d95e18c7cfb56bdcf 511 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 196 505 3.3E-117 T 13-09-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase PMA3_RS20515 96cbdbb7c68bdc1d95e18c7cfb56bdcf 511 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 184 1.3E-46 T 13-09-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices PMA3_RS07820 bb47243627c02f26f519f9279f4bf8ac 171 SUPERFAMILY SSF158694 11 170 1.57E-50 T 13-09-2016 PMA3_RS07820 bb47243627c02f26f519f9279f4bf8ac 171 Gene3D G3DSA:1.10.3330.10 11 170 3.7E-59 T 13-09-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 PMA3_RS07820 bb47243627c02f26f519f9279f4bf8ac 171 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 13 169 6.5E-69 T 13-09-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 PMA3_RS07820 bb47243627c02f26f519f9279f4bf8ac 171 Pfam PF09349 OHCU decarboxylase 11 168 7.5E-45 T 13-09-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 PMA3_RS25670 bf86879b6b68bfd6cba9453375b33c90 418 PANTHER PTHR30629 2 418 2.3E-159 T 13-09-2016 PMA3_RS25670 bf86879b6b68bfd6cba9453375b33c90 418 Pfam PF00589 Phage integrase family 214 377 3.3E-27 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS25670 bf86879b6b68bfd6cba9453375b33c90 418 SUPERFAMILY SSF56349 106 386 4.12E-58 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS25670 bf86879b6b68bfd6cba9453375b33c90 418 Gene3D G3DSA:1.10.150.130 106 206 2.4E-15 T 13-09-2016 IPR023109 Integrase/recombinase, N-terminal PMA3_RS25670 bf86879b6b68bfd6cba9453375b33c90 418 Gene3D G3DSA:1.10.443.10 214 382 3.9E-23 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS25670 bf86879b6b68bfd6cba9453375b33c90 418 Pfam PF13356 Domain of unknown function (DUF4102) 8 94 2.5E-18 T 13-09-2016 IPR025166 Domain of unknown function DUF4102 PMA3_RS25670 bf86879b6b68bfd6cba9453375b33c90 418 PANTHER PTHR30629:SF2 2 418 2.3E-159 T 13-09-2016 PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 PANTHER PTHR10799:SF774 147 533 5.2E-83 T 13-09-2016 PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 108 2.8E-20 T 13-09-2016 IPR005330 MHYT domain PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 Pfam PF03707 Bacterial signalling protein N terminal repeat 182 246 1.4E-10 T 13-09-2016 IPR005330 MHYT domain PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 Pfam PF03707 Bacterial signalling protein N terminal repeat 115 165 3.5E-18 T 13-09-2016 IPR005330 MHYT domain PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 Pfam PF00563 EAL domain 439 674 1.9E-71 T 13-09-2016 IPR001633 EAL domain PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 SMART SM00052 433 679 3.1E-114 T 13-09-2016 IPR001633 EAL domain PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 421 8.2E-43 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 PANTHER PTHR10799 147 533 5.2E-83 T 13-09-2016 PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 Gene3D G3DSA:3.20.20.450 436 682 2.8E-98 T 13-09-2016 IPR001633 EAL domain PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 3.8E-45 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 SUPERFAMILY SSF55073 268 424 3.84E-48 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 SUPERFAMILY SSF141868 439 684 3.79E-90 T 13-09-2016 IPR001633 EAL domain PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 SMART SM00267 252 423 2.0E-59 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS15005 186b0466f57b75ac9068e81b4016962e 693 Gene3D G3DSA:3.30.70.270 265 431 4.5E-56 T 13-09-2016 PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 Pfam PF05228 CHASE4 domain 68 227 2.0E-20 T 13-09-2016 IPR007892 CHASE4 PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 Gene3D G3DSA:3.30.70.270 432 599 1.9E-57 T 13-09-2016 PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 Gene3D G3DSA:3.20.20.450 605 849 4.1E-95 T 13-09-2016 IPR001633 EAL domain PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 PANTHER PTHR33121 524 859 2.1E-86 T 13-09-2016 PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 SMART SM00091 313 379 1.8E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 PANTHER PTHR33121:SF13 524 859 2.1E-86 T 13-09-2016 PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 SMART SM00052 602 843 4.7E-113 T 13-09-2016 IPR001633 EAL domain PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 SMART SM00267 420 592 1.3E-66 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 Gene3D G3DSA:3.30.450.20 305 418 7.9E-16 T 13-09-2016 PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 Pfam PF00990 Diguanylate cyclase, GGDEF domain 432 588 2.5E-49 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 SUPERFAMILY SSF55073 436 593 8.63E-50 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 SUPERFAMILY SSF55785 301 418 1.05E-14 T 13-09-2016 IPR000014 PAS domain PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 Pfam PF13188 PAS domain 313 361 1.6E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 310 426 4.3E-11 T 13-09-2016 IPR000014 PAS domain PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 428 590 1.0E-43 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 Pfam PF00563 EAL domain 608 838 1.7E-70 T 13-09-2016 IPR001633 EAL domain PMA3_RS18500 3836e2841b0c3b817288edd24f0e7894 860 SUPERFAMILY SSF141868 607 849 5.23E-87 T 13-09-2016 IPR001633 EAL domain PMA3_RS14150 e1a3fd8320a24d8ad5831cdd558fb73c 438 SUPERFAMILY SSF103473 9 416 1.96E-72 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS14150 e1a3fd8320a24d8ad5831cdd558fb73c 438 PANTHER PTHR23505 2 410 3.0E-49 T 13-09-2016 PMA3_RS14150 e1a3fd8320a24d8ad5831cdd558fb73c 438 Pfam PF07690 Major Facilitator Superfamily 32 374 1.8E-51 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS14150 e1a3fd8320a24d8ad5831cdd558fb73c 438 Gene3D G3DSA:1.20.1250.20 221 421 1.0E-25 T 13-09-2016 PMA3_RS14150 e1a3fd8320a24d8ad5831cdd558fb73c 438 Gene3D G3DSA:1.20.1250.20 19 203 8.5E-34 T 13-09-2016 PMA3_RS00725 78c635b057de4d63d5cdce4f3aa32171 330 PIRSF PIRSF006278 1 330 3.5E-96 T 13-09-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase PMA3_RS00725 78c635b057de4d63d5cdce4f3aa32171 330 PANTHER PTHR10314:SF105 1 319 3.6E-124 T 13-09-2016 PMA3_RS00725 78c635b057de4d63d5cdce4f3aa32171 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 318 2.5E-51 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS00725 78c635b057de4d63d5cdce4f3aa32171 330 SUPERFAMILY SSF53686 8 328 1.57E-85 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS00725 78c635b057de4d63d5cdce4f3aa32171 330 Gene3D G3DSA:3.40.50.1100 113 328 1.4E-66 T 13-09-2016 PMA3_RS00725 78c635b057de4d63d5cdce4f3aa32171 330 PANTHER PTHR10314 1 319 3.6E-124 T 13-09-2016 PMA3_RS00725 78c635b057de4d63d5cdce4f3aa32171 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 1.1E-112 T 13-09-2016 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.2E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.2E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.2E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PANTHER PTHR24322 154 186 2.9E-65 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.0E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.0E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.0E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.0E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.0E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PANTHER PTHR24322 12 138 2.9E-65 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PANTHER PTHR24322:SF25 12 138 2.9E-65 T 13-09-2016 PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 Gene3D G3DSA:3.40.50.720 2 259 7.1E-64 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 9.5E-41 T 13-09-2016 PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 SUPERFAMILY SSF51735 1 259 1.18E-61 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10795 c61832f6c80bee5df0ccbd801fdcd5fd 265 PANTHER PTHR24322:SF25 154 186 2.9E-65 T 13-09-2016 PMA3_RS21410 4327441314554866725cbe6415f1e25c 249 Pfam PF12706 Beta-lactamase superfamily domain 64 220 1.9E-20 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS21410 4327441314554866725cbe6415f1e25c 249 Gene3D G3DSA:3.60.15.10 1 247 1.6E-54 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS21410 4327441314554866725cbe6415f1e25c 249 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 248 6.7E-117 T 13-09-2016 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 PMA3_RS21410 4327441314554866725cbe6415f1e25c 249 SMART SM00849 36 220 2.1E-7 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS21410 4327441314554866725cbe6415f1e25c 249 SUPERFAMILY SSF56281 1 248 2.75E-41 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS09790 fa6f4c6b8169da83b20a0bc196b779a3 166 Gene3D G3DSA:3.10.20.30 10 82 4.1E-26 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS09790 fa6f4c6b8169da83b20a0bc196b779a3 166 SUPERFAMILY SSF47741 92 161 2.88E-29 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS09790 fa6f4c6b8169da83b20a0bc196b779a3 166 SUPERFAMILY SSF54292 7 96 3.28E-24 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS09790 fa6f4c6b8169da83b20a0bc196b779a3 166 Gene3D G3DSA:1.10.150.120 83 162 1.5E-31 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS09790 fa6f4c6b8169da83b20a0bc196b779a3 166 PANTHER PTHR11908:SF2 7 153 1.4E-38 T 13-09-2016 PMA3_RS09790 fa6f4c6b8169da83b20a0bc196b779a3 166 Pfam PF01799 [2Fe-2S] binding domain 81 153 2.1E-26 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS09790 fa6f4c6b8169da83b20a0bc196b779a3 166 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 61 2.2E-6 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS09790 fa6f4c6b8169da83b20a0bc196b779a3 166 PANTHER PTHR11908 7 153 1.4E-38 T 13-09-2016 PMA3_RS09790 fa6f4c6b8169da83b20a0bc196b779a3 166 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 47 55 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 Gene3D G3DSA:3.40.50.720 182 357 7.9E-36 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 SUPERFAMILY SSF69742 1 156 3.92E-48 T 13-09-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 PANTHER PTHR21089:SF3 270 357 6.4E-137 T 13-09-2016 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 PANTHER PTHR21089:SF3 37 254 6.4E-137 T 13-09-2016 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.7E-47 T 13-09-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 413 9.0E-137 T 13-09-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 SUPERFAMILY SSF51735 160 313 2.43E-34 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 6.0E-50 T 13-09-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 13-09-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 319 415 1.5E-20 T 13-09-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 PIRSF PIRSF000445 1 428 4.0E-151 T 13-09-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.627 T 13-09-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 PANTHER PTHR21089 270 357 6.4E-137 T 13-09-2016 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 PANTHER PTHR21089 37 254 6.4E-137 T 13-09-2016 PMA3_RS03765 124f2e8a927b7dca4ae0b458bf14ff0c 429 SUPERFAMILY SSF69075 315 416 2.35E-24 T 13-09-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PMA3_RS28405 6e05b4c0930bd4fd6bb9fa04a6a90b22 685 PANTHER PTHR32089 313 676 5.4E-133 T 13-09-2016 PMA3_RS28405 6e05b4c0930bd4fd6bb9fa04a6a90b22 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 433 462 4.8E-20 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS28405 6e05b4c0930bd4fd6bb9fa04a6a90b22 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 510 537 4.8E-20 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS28405 6e05b4c0930bd4fd6bb9fa04a6a90b22 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 539 568 4.8E-20 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS28405 6e05b4c0930bd4fd6bb9fa04a6a90b22 685 SMART SM00283 412 673 8.5E-91 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS28405 6e05b4c0930bd4fd6bb9fa04a6a90b22 685 SUPERFAMILY SSF58104 373 677 2.09E-67 T 13-09-2016 PMA3_RS28405 6e05b4c0930bd4fd6bb9fa04a6a90b22 685 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 38 147 3.1E-25 T 13-09-2016 IPR029095 NarX-like, N-terminal PMA3_RS28405 6e05b4c0930bd4fd6bb9fa04a6a90b22 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 672 1.0E-48 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS28405 6e05b4c0930bd4fd6bb9fa04a6a90b22 685 Gene3D G3DSA:1.10.287.950 427 644 2.4E-53 T 13-09-2016 PMA3_RS28405 6e05b4c0930bd4fd6bb9fa04a6a90b22 685 PANTHER PTHR32089:SF43 313 676 5.4E-133 T 13-09-2016 PMA3_RS01835 7c3dae75cbe1688b358837de4dc44a01 476 PANTHER PTHR12993 310 397 1.5E-56 T 13-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PMA3_RS01835 7c3dae75cbe1688b358837de4dc44a01 476 SUPERFAMILY SSF102588 181 461 1.96E-28 T 13-09-2016 IPR024078 Putative deacetylase LmbE-like domain PMA3_RS01835 7c3dae75cbe1688b358837de4dc44a01 476 PANTHER PTHR12993:SF10 310 397 1.5E-56 T 13-09-2016 PMA3_RS01835 7c3dae75cbe1688b358837de4dc44a01 476 PANTHER PTHR12993:SF10 136 281 1.5E-56 T 13-09-2016 PMA3_RS01835 7c3dae75cbe1688b358837de4dc44a01 476 Pfam PF02585 GlcNAc-PI de-N-acetylase 184 353 5.8E-12 T 13-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PMA3_RS01835 7c3dae75cbe1688b358837de4dc44a01 476 PANTHER PTHR12993 136 281 1.5E-56 T 13-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PMA3_RS01835 7c3dae75cbe1688b358837de4dc44a01 476 Gene3D G3DSA:3.40.50.10320 308 446 5.0E-19 T 13-09-2016 IPR024078 Putative deacetylase LmbE-like domain PMA3_RS01835 7c3dae75cbe1688b358837de4dc44a01 476 Gene3D G3DSA:3.40.50.10320 180 268 5.0E-19 T 13-09-2016 IPR024078 Putative deacetylase LmbE-like domain PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 323 329 2.1E-29 T 13-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 89 101 2.1E-29 T 13-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 2.1E-29 T 13-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 15 27 2.1E-29 T 13-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 28 38 2.1E-29 T 13-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 44 56 2.1E-29 T 13-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 PANTHER PTHR11985 12 493 4.2E-186 T 13-09-2016 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 PANTHER PTHR11985:SF1 12 493 4.2E-186 T 13-09-2016 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 Pfam PF01266 FAD dependent oxidoreductase 16 339 9.8E-48 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 20 37 - T 13-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 390 494 5.5E-11 T 13-09-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 13-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 Gene3D G3DSA:3.50.50.60 8 250 1.6E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 SUPERFAMILY SSF51905 261 332 4.44E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS23835 d050911a69f0de649a450c9320b98809 512 SUPERFAMILY SSF51905 15 234 4.44E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19830 1507a9229319a9c3576923ca28059cf2 509 SUPERFAMILY SSF103473 251 422 3.01E-63 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS19830 1507a9229319a9c3576923ca28059cf2 509 SUPERFAMILY SSF103473 9 197 3.01E-63 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS19830 1507a9229319a9c3576923ca28059cf2 509 Gene3D G3DSA:1.20.1250.20 268 420 1.7E-17 T 13-09-2016 PMA3_RS19830 1507a9229319a9c3576923ca28059cf2 509 Gene3D G3DSA:1.20.1250.20 453 494 1.7E-17 T 13-09-2016 PMA3_RS19830 1507a9229319a9c3576923ca28059cf2 509 PANTHER PTHR23501:SF52 3 501 7.4E-254 T 13-09-2016 PMA3_RS19830 1507a9229319a9c3576923ca28059cf2 509 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 493 1.5E-149 T 13-09-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 PMA3_RS19830 1507a9229319a9c3576923ca28059cf2 509 Gene3D G3DSA:1.20.1250.20 16 188 1.0E-31 T 13-09-2016 PMA3_RS19830 1507a9229319a9c3576923ca28059cf2 509 Pfam PF07690 Major Facilitator Superfamily 19 413 3.0E-53 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS19830 1507a9229319a9c3576923ca28059cf2 509 PANTHER PTHR23501 3 501 7.4E-254 T 13-09-2016 PMA3_RS25590 039d79b382c15fe5a9e2575b9e2e0991 557 PANTHER PTHR11059 2 555 3.1E-170 T 13-09-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PMA3_RS25590 039d79b382c15fe5a9e2575b9e2e0991 557 SUPERFAMILY SSF52540 284 507 1.56E-27 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25590 039d79b382c15fe5a9e2575b9e2e0991 557 SUPERFAMILY SSF52540 2 50 1.56E-27 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25590 039d79b382c15fe5a9e2575b9e2e0991 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.5E-161 T 13-09-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PMA3_RS25590 039d79b382c15fe5a9e2575b9e2e0991 557 PIRSF PIRSF003128 1 557 1.1E-161 T 13-09-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PMA3_RS25590 039d79b382c15fe5a9e2575b9e2e0991 557 Gene3D G3DSA:3.40.50.300 424 503 1.4E-6 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25590 039d79b382c15fe5a9e2575b9e2e0991 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 8 510 4.1E-15 T 13-09-2016 IPR003395 RecF/RecN/SMC, N-terminal PMA3_RS25590 039d79b382c15fe5a9e2575b9e2e0991 557 Gene3D G3DSA:3.40.50.300 1 205 1.1E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25590 039d79b382c15fe5a9e2575b9e2e0991 557 SUPERFAMILY SSF52540 1 217 2.57E-65 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16860 bc7c4538c3681a4f094ac60902c44d0f 478 PANTHER PTHR22935:SF67 67 328 2.9E-72 T 13-09-2016 PMA3_RS16860 bc7c4538c3681a4f094ac60902c44d0f 478 Pfam PF01427 D-ala-D-ala dipeptidase 32 154 7.2E-19 T 13-09-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PMA3_RS16860 bc7c4538c3681a4f094ac60902c44d0f 478 Pfam PF01427 D-ala-D-ala dipeptidase 186 242 2.8E-15 T 13-09-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PMA3_RS16860 bc7c4538c3681a4f094ac60902c44d0f 478 PANTHER PTHR22935 67 328 2.9E-72 T 13-09-2016 PMA3_RS16860 bc7c4538c3681a4f094ac60902c44d0f 478 Gene3D G3DSA:3.30.1380.10 30 241 1.9E-65 T 13-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PMA3_RS16860 bc7c4538c3681a4f094ac60902c44d0f 478 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 32 251 30.384 T 13-09-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PMA3_RS16860 bc7c4538c3681a4f094ac60902c44d0f 478 SUPERFAMILY SSF55166 30 242 4.71E-56 T 13-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PMA3_RS20215 0bd867b273178f3e252f8b9ede0f1150 608 SUPERFAMILY SSF48208 205 598 2.94E-99 T 13-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PMA3_RS20215 0bd867b273178f3e252f8b9ede0f1150 608 PANTHER PTHR31616:SF0 3 608 6.9E-161 T 13-09-2016 PMA3_RS20215 0bd867b273178f3e252f8b9ede0f1150 608 Gene3D G3DSA:1.50.10.10 220 602 6.3E-94 T 13-09-2016 IPR012341 Six-hairpin glycosidase GO:0003824 PMA3_RS20215 0bd867b273178f3e252f8b9ede0f1150 608 Pfam PF00723 Glycosyl hydrolases family 15 226 545 6.6E-44 T 13-09-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 PMA3_RS20215 0bd867b273178f3e252f8b9ede0f1150 608 PANTHER PTHR31616 3 608 6.9E-161 T 13-09-2016 PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 SUPERFAMILY SSF52540 194 435 1.85E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 452 498 2.5E-21 T 13-09-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 PANTHER PTHR32071:SF3 1 498 3.3E-183 T 13-09-2016 PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 Gene3D G3DSA:1.10.8.60 367 436 3.6E-21 T 13-09-2016 PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 SUPERFAMILY SSF46689 446 498 1.73E-5 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 PANTHER PTHR32071 1 498 3.3E-183 T 13-09-2016 PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 Gene3D G3DSA:1.10.10.60 448 498 9.3E-19 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 Pfam PF00158 Sigma-54 interaction domain 193 360 1.9E-65 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 SMART SM00091 79 142 0.0095 T 13-09-2016 IPR000014 PAS domain PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 Gene3D G3DSA:3.40.50.300 190 366 1.7E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 SMART SM00382 213 358 1.9E-7 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 217 230 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS17265 25a92e062698dac3c28c50626bd12711 502 Gene3D G3DSA:3.30.450.20 76 151 8.8E-7 T 13-09-2016 PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 PANTHER PTHR11444 3 459 3.5E-233 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 Gene3D G3DSA:1.10.40.30 416 460 2.0E-31 T 13-09-2016 PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 2.7E-32 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 2.7E-32 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 2.7E-32 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 2.7E-32 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 PANTHER PTHR11444:SF1 3 459 3.5E-233 T 13-09-2016 PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 458 3.1E-218 T 13-09-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 Pfam PF10415 Fumarase C C-terminus 406 458 6.8E-26 T 13-09-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 SUPERFAMILY SSF48557 3 459 3.46E-153 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 Gene3D G3DSA:1.10.275.10 2 136 5.0E-60 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 Gene3D G3DSA:1.20.200.10 137 415 8.5E-100 T 13-09-2016 PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 13-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 Pfam PF00206 Lyase 10 340 1.5E-103 T 13-09-2016 IPR022761 Fumarate lyase, N-terminal PMA3_RS06900 c9b476eb6ee51aad083d93c04f48121e 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 2 460 89.178 T 13-09-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS01830 e0eb763f2e15eb7d19eb02e5a433d971 298 Pfam PF07395 Mig-14 35 297 7.0E-141 T 13-09-2016 IPR009977 Mig-14 PMA3_RS01830 e0eb763f2e15eb7d19eb02e5a433d971 298 PIRSF PIRSF029703 1 298 2.4E-129 T 13-09-2016 IPR009977 Mig-14 PMA3_RS01830 e0eb763f2e15eb7d19eb02e5a433d971 298 SUPERFAMILY SSF55729 137 291 5.09E-17 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS01830 e0eb763f2e15eb7d19eb02e5a433d971 298 Gene3D G3DSA:3.40.630.30 134 256 3.6E-4 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS23335 78269be3fbb5fe67c9e62fd5da4938f7 197 SUPERFAMILY SSF89028 7 186 1.59E-56 T 13-09-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PMA3_RS23335 78269be3fbb5fe67c9e62fd5da4938f7 197 PANTHER PTHR12213 3 186 5.9E-77 T 13-09-2016 PMA3_RS23335 78269be3fbb5fe67c9e62fd5da4938f7 197 PANTHER PTHR12213:SF0 3 186 5.9E-77 T 13-09-2016 PMA3_RS23335 78269be3fbb5fe67c9e62fd5da4938f7 197 Gene3D G3DSA:1.20.1200.10 17 188 2.2E-56 T 13-09-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PMA3_RS23335 78269be3fbb5fe67c9e62fd5da4938f7 197 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 186 6.0E-86 T 13-09-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PMA3_RS23335 78269be3fbb5fe67c9e62fd5da4938f7 197 Pfam PF01923 Cobalamin adenosyltransferase 8 173 1.9E-52 T 13-09-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PMA3_RS23335 78269be3fbb5fe67c9e62fd5da4938f7 197 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 186 5.3E-49 T 13-09-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 SUPERFAMILY SSF50621 228 354 7.67E-44 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 13-09-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 TIGRFAM TIGR00492 alr: alanine racemase 3 353 1.5E-112 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 SMART SM01005 232 355 2.0E-65 T 13-09-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PANTHER PTHR30511:SF0 1 354 1.2E-155 T 13-09-2016 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 Gene3D G3DSA:3.20.20.10 10 211 3.7E-74 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 6.5E-38 T 13-09-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PRINTS PR00992 Alanine racemase signature 120 132 7.0E-63 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PRINTS PR00992 Alanine racemase signature 154 165 7.0E-63 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PRINTS PR00992 Alanine racemase signature 286 303 7.0E-63 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PRINTS PR00992 Alanine racemase signature 191 218 7.0E-63 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PRINTS PR00992 Alanine racemase signature 338 351 7.0E-63 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PRINTS PR00992 Alanine racemase signature 60 78 7.0E-63 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PRINTS PR00992 Alanine racemase signature 25 41 7.0E-63 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PRINTS PR00992 Alanine racemase signature 248 263 7.0E-63 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PRINTS PR00992 Alanine racemase signature 265 280 7.0E-63 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 Gene3D G3DSA:2.40.37.10 212 355 5.0E-55 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 SUPERFAMILY SSF51419 8 233 1.06E-73 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 PANTHER PTHR30511 1 354 1.2E-155 T 13-09-2016 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 Hamap MF_01201 Alanine racemase. 1 355 35.374 T 13-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS29410 7b8a9f0ba1d564b4339cdac19e5d6fdd 357 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 5.3E-73 T 13-09-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 Pfam PF01965 DJ-1/PfpI family 3 171 1.5E-24 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 Pfam PF12833 Helix-turn-helix domain 237 314 3.9E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 PANTHER PTHR11019:SF58 93 321 3.2E-77 T 13-09-2016 PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 SUPERFAMILY SSF52317 3 196 1.24E-47 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 Gene3D G3DSA:3.40.50.880 4 221 3.9E-54 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 Gene3D G3DSA:1.10.10.60 268 316 4.3E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 PANTHER PTHR11019 93 321 3.2E-77 T 13-09-2016 PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 SMART SM00342 231 314 9.5E-28 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 SUPERFAMILY SSF46689 216 264 3.27E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 Gene3D G3DSA:1.10.10.60 222 267 7.2E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28855 0ba5f39cad8ffe68669f6cde49010522 321 SUPERFAMILY SSF46689 268 316 1.84E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS22505 3d8f72c86b16488b745d5d2ae6b9516c 186 Gene3D G3DSA:3.30.70.260 8 86 1.1E-12 T 13-09-2016 PMA3_RS22505 3d8f72c86b16488b745d5d2ae6b9516c 186 Gene3D G3DSA:3.30.70.260 98 183 1.5E-13 T 13-09-2016 PMA3_RS22505 3d8f72c86b16488b745d5d2ae6b9516c 186 SUPERFAMILY SSF55021 94 181 8.85E-14 T 13-09-2016 PMA3_RS22505 3d8f72c86b16488b745d5d2ae6b9516c 186 PIRSF PIRSF028103 7 182 9.5E-57 T 13-09-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 PMA3_RS22505 3d8f72c86b16488b745d5d2ae6b9516c 186 SUPERFAMILY SSF55021 8 87 1.28E-8 T 13-09-2016 PMA3_RS22505 3d8f72c86b16488b745d5d2ae6b9516c 186 PANTHER PTHR34875:SF3 1 183 5.2E-48 T 13-09-2016 PMA3_RS22505 3d8f72c86b16488b745d5d2ae6b9516c 186 Pfam PF13740 ACT domain 9 83 1.2E-16 T 13-09-2016 PMA3_RS22505 3d8f72c86b16488b745d5d2ae6b9516c 186 PANTHER PTHR34875 1 183 5.2E-48 T 13-09-2016 PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 Gene3D G3DSA:3.30.565.10 423 541 1.1E-6 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 Pfam PF00072 Response regulator receiver domain 10 121 8.9E-25 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 SUPERFAMILY SSF52172 7 147 2.42E-39 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 SUPERFAMILY SSF55874 490 542 2.6E-7 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 SUPERFAMILY SSF55874 436 459 2.6E-7 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 195 381 9.3E-35 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 SMART SM00448 8 121 2.6E-38 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 SMART SM00331 178 383 2.6E-5 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 PANTHER PTHR24423 1 162 5.4E-40 T 13-09-2016 PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 Gene3D G3DSA:3.40.50.2300 5 134 9.0E-39 T 13-09-2016 PMA3_RS21700 a9fab762caeee256c5399e02cb9d2fdd 568 Pfam PF13581 Histidine kinase-like ATPase domain 447 558 7.8E-8 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS26510 719af639a96cbf1789b8ac37754a80a3 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 379 4.4E-88 T 13-09-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 PMA3_RS26510 719af639a96cbf1789b8ac37754a80a3 398 PANTHER PTHR23502 1 382 6.9E-134 T 13-09-2016 PMA3_RS26510 719af639a96cbf1789b8ac37754a80a3 398 Gene3D G3DSA:1.20.1250.20 4 182 1.2E-26 T 13-09-2016 PMA3_RS26510 719af639a96cbf1789b8ac37754a80a3 398 PANTHER PTHR23502:SF19 1 382 6.9E-134 T 13-09-2016 PMA3_RS26510 719af639a96cbf1789b8ac37754a80a3 398 SUPERFAMILY SSF103473 3 386 1.7E-55 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS26510 719af639a96cbf1789b8ac37754a80a3 398 Pfam PF07690 Major Facilitator Superfamily 15 346 2.7E-37 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS26510 719af639a96cbf1789b8ac37754a80a3 398 Gene3D G3DSA:1.20.1250.20 203 383 2.4E-5 T 13-09-2016 PMA3_RS25100 da080098eb1e950d87a0fb3410e9a411 241 Gene3D G3DSA:3.40.50.300 3 234 9.1E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25100 da080098eb1e950d87a0fb3410e9a411 241 PANTHER PTHR24220 5 238 5.2E-147 T 13-09-2016 PMA3_RS25100 da080098eb1e950d87a0fb3410e9a411 241 SUPERFAMILY SSF52540 4 235 7.21E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25100 da080098eb1e950d87a0fb3410e9a411 241 PANTHER PTHR24220:SF497 5 238 5.2E-147 T 13-09-2016 PMA3_RS25100 da080098eb1e950d87a0fb3410e9a411 241 SMART SM00382 28 229 1.8E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25100 da080098eb1e950d87a0fb3410e9a411 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 3.2E-5 T 13-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PMA3_RS25100 da080098eb1e950d87a0fb3410e9a411 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS25100 da080098eb1e950d87a0fb3410e9a411 241 Pfam PF00005 ABC transporter 20 166 7.2E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS25100 da080098eb1e950d87a0fb3410e9a411 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 2.9E-123 T 13-09-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 PMA3_RS11660 edd01e589ea9bdbce0311a589eab850c 560 Gene3D G3DSA:3.30.300.30 458 557 3.1E-21 T 13-09-2016 PMA3_RS11660 edd01e589ea9bdbce0311a589eab850c 560 Gene3D G3DSA:3.40.50.980 49 205 1.0E-33 T 13-09-2016 PMA3_RS11660 edd01e589ea9bdbce0311a589eab850c 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 472 548 2.2E-8 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS11660 edd01e589ea9bdbce0311a589eab850c 560 Gene3D G3DSA:2.30.38.10 381 454 1.1E-20 T 13-09-2016 PMA3_RS11660 edd01e589ea9bdbce0311a589eab850c 560 Gene3D G3DSA:3.40.50.980 206 366 2.0E-27 T 13-09-2016 PMA3_RS11660 edd01e589ea9bdbce0311a589eab850c 560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 201 212 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS11660 edd01e589ea9bdbce0311a589eab850c 560 SUPERFAMILY SSF56801 9 557 1.83E-119 T 13-09-2016 PMA3_RS11660 edd01e589ea9bdbce0311a589eab850c 560 PANTHER PTHR24096 43 557 5.6E-118 T 13-09-2016 PMA3_RS11660 edd01e589ea9bdbce0311a589eab850c 560 Pfam PF00501 AMP-binding enzyme 47 463 8.6E-83 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS27440 c2e02c4d9ac0c8ee00ad70418757bc49 114 Pfam PF01230 HIT domain 13 108 5.8E-28 T 13-09-2016 IPR001310 Histidine triad (HIT) protein PMA3_RS27440 c2e02c4d9ac0c8ee00ad70418757bc49 114 PANTHER PTHR23089 5 114 6.8E-54 T 13-09-2016 IPR001310 Histidine triad (HIT) protein PMA3_RS27440 c2e02c4d9ac0c8ee00ad70418757bc49 114 Gene3D G3DSA:3.30.428.10 2 114 1.2E-44 T 13-09-2016 IPR011146 HIT-like domain GO:0003824 PMA3_RS27440 c2e02c4d9ac0c8ee00ad70418757bc49 114 SUPERFAMILY SSF54197 1 113 8.82E-42 T 13-09-2016 IPR011146 HIT-like domain GO:0003824 PMA3_RS27440 c2e02c4d9ac0c8ee00ad70418757bc49 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 13-09-2016 IPR019808 Histidine triad, conserved site PMA3_RS27440 c2e02c4d9ac0c8ee00ad70418757bc49 114 PRINTS PR00332 Histidine triad family signature 6 22 3.0E-20 T 13-09-2016 IPR001310 Histidine triad (HIT) protein PMA3_RS27440 c2e02c4d9ac0c8ee00ad70418757bc49 114 PRINTS PR00332 Histidine triad family signature 94 104 3.0E-20 T 13-09-2016 IPR001310 Histidine triad (HIT) protein PMA3_RS27440 c2e02c4d9ac0c8ee00ad70418757bc49 114 PRINTS PR00332 Histidine triad family signature 27 45 3.0E-20 T 13-09-2016 IPR001310 Histidine triad (HIT) protein PMA3_RS19470 7cb05b614abd7d92c44eeb1a5d6d2061 333 Pfam PF04116 Fatty acid hydroxylase superfamily 141 286 5.3E-28 T 13-09-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PMA3_RS19470 7cb05b614abd7d92c44eeb1a5d6d2061 333 PANTHER PTHR11863:SF2 141 287 1.2E-18 T 13-09-2016 PMA3_RS19470 7cb05b614abd7d92c44eeb1a5d6d2061 333 PANTHER PTHR11863 141 287 1.2E-18 T 13-09-2016 PMA3_RS29495 b1a133259c8e6afba50c7121deb4c2da 528 PANTHER PTHR30290:SF14 8 528 2.8E-183 T 13-09-2016 PMA3_RS29495 b1a133259c8e6afba50c7121deb4c2da 528 Gene3D G3DSA:3.10.105.10 284 498 7.2E-60 T 13-09-2016 PMA3_RS29495 b1a133259c8e6afba50c7121deb4c2da 528 SUPERFAMILY SSF53850 24 527 4.73E-139 T 13-09-2016 PMA3_RS29495 b1a133259c8e6afba50c7121deb4c2da 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 445 8.2E-92 T 13-09-2016 IPR000914 Solute-binding protein family 5 domain PMA3_RS29495 b1a133259c8e6afba50c7121deb4c2da 528 PANTHER PTHR30290 8 528 2.8E-183 T 13-09-2016 PMA3_RS29495 b1a133259c8e6afba50c7121deb4c2da 528 Gene3D G3DSA:3.90.76.10 32 212 1.3E-42 T 13-09-2016 PMA3_RS29495 b1a133259c8e6afba50c7121deb4c2da 528 PIRSF PIRSF002741 19 527 1.3E-109 T 13-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PMA3_RS14595 a2ecca23e3a2a25c6dd9cc8cfc252ced 377 PANTHER PTHR10314 20 69 1.4E-81 T 13-09-2016 PMA3_RS14595 a2ecca23e3a2a25c6dd9cc8cfc252ced 377 PANTHER PTHR10314 91 370 1.4E-81 T 13-09-2016 PMA3_RS14595 a2ecca23e3a2a25c6dd9cc8cfc252ced 377 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 354 7.8E-61 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS14595 a2ecca23e3a2a25c6dd9cc8cfc252ced 377 PANTHER PTHR10314:SF127 91 370 1.4E-81 T 13-09-2016 PMA3_RS14595 a2ecca23e3a2a25c6dd9cc8cfc252ced 377 PANTHER PTHR10314:SF127 20 69 1.4E-81 T 13-09-2016 PMA3_RS14595 a2ecca23e3a2a25c6dd9cc8cfc252ced 377 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 15 370 2.2E-97 T 13-09-2016 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 PMA3_RS14595 a2ecca23e3a2a25c6dd9cc8cfc252ced 377 SUPERFAMILY SSF53686 21 339 4.85E-59 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS14595 a2ecca23e3a2a25c6dd9cc8cfc252ced 377 Gene3D G3DSA:3.40.50.1100 98 371 2.0E-36 T 13-09-2016 PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 Gene3D G3DSA:3.30.1330.60 334 445 3.4E-22 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 PANTHER PTHR30570 32 55 5.4E-55 T 13-09-2016 PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 PANTHER PTHR30570 81 362 5.4E-55 T 13-09-2016 PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 SUPERFAMILY SSF53850 33 53 6.18E-57 T 13-09-2016 PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 SUPERFAMILY SSF53850 84 356 6.18E-57 T 13-09-2016 PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 SUPERFAMILY SSF103088 319 445 1.83E-20 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 PANTHER PTHR30570:SF1 81 362 5.4E-55 T 13-09-2016 PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 PANTHER PTHR30570:SF1 32 55 5.4E-55 T 13-09-2016 PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 Gene3D G3DSA:3.40.190.10 141 273 7.4E-32 T 13-09-2016 PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 Pfam PF12849 PBP superfamily domain 87 295 1.8E-29 T 13-09-2016 IPR024370 PBP domain PMA3_RS07920 3b34cb3fefdea08926a0882627bffa69 446 Pfam PF00691 OmpA family 345 439 2.8E-15 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 13-09-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 399 1.5E-142 T 13-09-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 SUPERFAMILY SSF52402 5 209 7.94E-51 T 13-09-2016 PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 Gene3D G3DSA:3.90.1260.10 160 359 8.6E-97 T 13-09-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 402 52.359 T 13-09-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 Pfam PF00764 Arginosuccinate synthase 8 397 3.6E-155 T 13-09-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 13-09-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 PANTHER PTHR11587:SF2 1 403 4.1E-236 T 13-09-2016 PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 Gene3D G3DSA:3.40.50.620 5 159 1.4E-67 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 PANTHER PTHR11587 1 403 4.1E-236 T 13-09-2016 PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 SUPERFAMILY SSF69864 175 402 1.1E-93 T 13-09-2016 PMA3_RS23750 5263108cf9d67b0a9d20e1dbf9595287 405 Gene3D G3DSA:1.20.5.470 369 395 3.6E-6 T 13-09-2016 PMA3_RS16305 3d5b6f2be2f0ba190a9323aba0875a3b 195 SUPERFAMILY SSF81452 16 194 4.97E-45 T 13-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PMA3_RS16305 3d5b6f2be2f0ba190a9323aba0875a3b 195 Gene3D G3DSA:1.20.120.80 17 194 2.3E-44 T 13-09-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 PMA3_RS16305 3d5b6f2be2f0ba190a9323aba0875a3b 195 PANTHER PTHR11403:SF6 19 194 6.0E-58 T 13-09-2016 PMA3_RS16305 3d5b6f2be2f0ba190a9323aba0875a3b 195 PANTHER PTHR11403 19 194 6.0E-58 T 13-09-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 PMA3_RS16305 3d5b6f2be2f0ba190a9323aba0875a3b 195 Pfam PF00510 Cytochrome c oxidase subunit III 20 193 6.4E-13 T 13-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PMA3_RS25435 4d2780ea9643b59b5806a309fdcfc6f6 258 Gene3D G3DSA:3.20.20.140 2 257 1.1E-77 T 13-09-2016 PMA3_RS25435 4d2780ea9643b59b5806a309fdcfc6f6 258 PIRSF PIRSF005902 1 258 5.5E-66 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS25435 4d2780ea9643b59b5806a309fdcfc6f6 258 Pfam PF01026 TatD related DNase 4 257 6.1E-65 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS25435 4d2780ea9643b59b5806a309fdcfc6f6 258 SUPERFAMILY SSF51556 3 257 7.24E-78 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS25435 4d2780ea9643b59b5806a309fdcfc6f6 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 13-09-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PMA3_RS25435 4d2780ea9643b59b5806a309fdcfc6f6 258 PANTHER PTHR10060 1 258 1.2E-83 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS09785 659a63e97a692a4a48748be3fd20d13c 268 Gene3D G3DSA:3.30.43.10 1 54 8.2E-20 T 13-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PMA3_RS09785 659a63e97a692a4a48748be3fd20d13c 268 SUPERFAMILY SSF56176 1 174 1.38E-47 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS09785 659a63e97a692a4a48748be3fd20d13c 268 PANTHER PTHR11908:SF68 1 260 6.0E-53 T 13-09-2016 PMA3_RS09785 659a63e97a692a4a48748be3fd20d13c 268 PANTHER PTHR11908 1 260 6.0E-53 T 13-09-2016 PMA3_RS09785 659a63e97a692a4a48748be3fd20d13c 268 Gene3D G3DSA:3.30.465.10 58 174 1.3E-30 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS09785 659a63e97a692a4a48748be3fd20d13c 268 SUPERFAMILY SSF55447 180 261 4.06E-13 T 13-09-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PMA3_RS09785 659a63e97a692a4a48748be3fd20d13c 268 Gene3D G3DSA:3.30.390.50 181 262 2.3E-11 T 13-09-2016 PMA3_RS09785 659a63e97a692a4a48748be3fd20d13c 268 SMART SM01092 181 268 1.2E-9 T 13-09-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PMA3_RS09785 659a63e97a692a4a48748be3fd20d13c 268 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 174 2.6E-41 T 13-09-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PMA3_RS03455 ddcb3a83b2ddf7b4a54b67499e8c801d 286 Gene3D G3DSA:3.40.50.620 1 174 6.4E-77 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS03455 ddcb3a83b2ddf7b4a54b67499e8c801d 286 Gene3D G3DSA:3.30.1300.10 177 283 1.2E-30 T 13-09-2016 PMA3_RS03455 ddcb3a83b2ddf7b4a54b67499e8c801d 286 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.986 T 13-09-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PMA3_RS03455 ddcb3a83b2ddf7b4a54b67499e8c801d 286 PANTHER PTHR21299 1 283 1.1E-134 T 13-09-2016 PMA3_RS03455 ddcb3a83b2ddf7b4a54b67499e8c801d 286 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 9.6E-107 T 13-09-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PMA3_RS03455 ddcb3a83b2ddf7b4a54b67499e8c801d 286 PANTHER PTHR21299:SF1 1 283 1.1E-134 T 13-09-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PMA3_RS03455 ddcb3a83b2ddf7b4a54b67499e8c801d 286 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 2.4E-104 T 13-09-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PMA3_RS03455 ddcb3a83b2ddf7b4a54b67499e8c801d 286 SUPERFAMILY SSF52374 1 281 7.32E-108 T 13-09-2016 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 Pfam PF13416 Bacterial extracellular solute-binding protein 41 327 1.1E-33 T 13-09-2016 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 Gene3D G3DSA:3.40.190.10 137 310 2.8E-73 T 13-09-2016 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PIRSF PIRSF019574 2 362 9.9E-135 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PANTHER PTHR30222:SF11 6 360 1.9E-180 T 13-09-2016 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 1.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 151 165 1.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 261 280 1.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 1.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 121 137 1.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 211 230 1.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 1.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 306 332 1.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 1.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 1.2E-63 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 SUPERFAMILY SSF53850 24 359 1.04E-96 T 13-09-2016 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 Gene3D G3DSA:3.40.190.10 40 136 3.7E-9 T 13-09-2016 PMA3_RS14720 45117bec9624183d0d4beb6bc422354a 362 PANTHER PTHR30222 6 360 1.9E-180 T 13-09-2016 PMA3_RS17795 cbcc6dd12edf35adfb2e6ecf27b7768b 375 PANTHER PTHR13504 28 347 9.7E-18 T 13-09-2016 PMA3_RS17795 cbcc6dd12edf35adfb2e6ecf27b7768b 375 PANTHER PTHR13504:SF32 28 347 9.7E-18 T 13-09-2016 PMA3_RS17795 cbcc6dd12edf35adfb2e6ecf27b7768b 375 SUPERFAMILY SSF140931 92 271 3.92E-26 T 13-09-2016 IPR003812 Fido domain PMA3_RS17795 cbcc6dd12edf35adfb2e6ecf27b7768b 375 Gene3D G3DSA:1.10.3290.10 15 277 1.2E-41 T 13-09-2016 IPR003812 Fido domain PMA3_RS17795 cbcc6dd12edf35adfb2e6ecf27b7768b 375 Pfam PF02661 Fic/DOC family 97 203 4.6E-14 T 13-09-2016 IPR003812 Fido domain PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 Pfam PF07729 FCD domain 97 217 9.0E-24 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 SMART SM00895 95 218 3.4E-21 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 SUPERFAMILY SSF46785 9 78 4.4E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 PANTHER PTHR11751 10 111 5.8E-37 T 13-09-2016 PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 SMART SM00345 16 75 6.7E-18 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 SUPERFAMILY SSF48008 95 216 3.14E-24 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 Gene3D G3DSA:1.20.120.530 93 217 1.3E-24 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 Gene3D G3DSA:1.10.10.10 9 76 1.3E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 7.2E-10 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 7.2E-10 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 2.4E-18 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS04290 4716b5b5746c1546dd086dd95e1caac7 219 PANTHER PTHR11751:SF342 10 111 5.8E-37 T 13-09-2016 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 Pfam PF00890 FAD binding domain 12 551 4.8E-86 T 13-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 Gene3D G3DSA:3.50.50.60 182 321 3.6E-65 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 Gene3D G3DSA:3.50.50.60 4 110 3.6E-65 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 Gene3D G3DSA:3.50.50.60 506 567 3.6E-65 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 SUPERFAMILY SSF56425 322 500 1.57E-31 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 Gene3D G3DSA:3.90.700.10 341 499 7.9E-30 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 SUPERFAMILY SSF51905 220 331 4.08E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 SUPERFAMILY SSF51905 509 567 4.08E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 SUPERFAMILY SSF51905 5 130 4.08E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 4.5E-5 T 13-09-2016 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 526 541 4.5E-5 T 13-09-2016 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 PANTHER PTHR11632:SF59 7 135 1.1E-155 T 13-09-2016 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 PANTHER PTHR11632:SF59 209 568 1.1E-155 T 13-09-2016 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 PANTHER PTHR11632 7 135 1.1E-155 T 13-09-2016 PMA3_RS11580 f5bf8860923b22b13907ab925ec9add7 569 PANTHER PTHR11632 209 568 1.1E-155 T 13-09-2016 PMA3_RS04445 095f27a26dd3e317bf82f8d89e315a4c 411 PANTHER PTHR22777 1 402 9.1E-73 T 13-09-2016 PMA3_RS04445 095f27a26dd3e317bf82f8d89e315a4c 411 SUPERFAMILY SSF56176 325 403 5.18E-20 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS04445 095f27a26dd3e317bf82f8d89e315a4c 411 Pfam PF03471 Transporter associated domain 329 401 2.1E-16 T 13-09-2016 IPR005170 Transporter-associated domain PMA3_RS04445 095f27a26dd3e317bf82f8d89e315a4c 411 SMART SM01091 327 405 8.5E-23 T 13-09-2016 IPR005170 Transporter-associated domain PMA3_RS04445 095f27a26dd3e317bf82f8d89e315a4c 411 SUPERFAMILY SSF54631 186 330 2.15E-25 T 13-09-2016 PMA3_RS04445 095f27a26dd3e317bf82f8d89e315a4c 411 Gene3D G3DSA:3.30.465.10 306 402 9.4E-24 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS04445 095f27a26dd3e317bf82f8d89e315a4c 411 Pfam PF01595 Domain of unknown function DUF21 13 162 1.1E-15 T 13-09-2016 IPR002550 Domain of unknown function DUF21 PMA3_RS04445 095f27a26dd3e317bf82f8d89e315a4c 411 Gene3D G3DSA:3.10.580.10 183 305 1.4E-15 T 13-09-2016 PMA3_RS04445 095f27a26dd3e317bf82f8d89e315a4c 411 Pfam PF00571 CBS domain 263 312 9.5E-7 T 13-09-2016 IPR000644 CBS domain PMA3_RS19300 601559cc2d85f8086e18f80c9535a265 515 PANTHER PTHR30536:SF5 2 515 1.6E-209 T 13-09-2016 PMA3_RS19300 601559cc2d85f8086e18f80c9535a265 515 Pfam PF08666 SAF domain 21 90 3.9E-14 T 13-09-2016 IPR013974 SAF domain PMA3_RS19300 601559cc2d85f8086e18f80c9535a265 515 SMART SM00858 21 90 6.2E-13 T 13-09-2016 IPR013974 SAF domain PMA3_RS19300 601559cc2d85f8086e18f80c9535a265 515 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 114 513 5.2E-160 T 13-09-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 PMA3_RS19300 601559cc2d85f8086e18f80c9535a265 515 PANTHER PTHR30536 2 515 1.6E-209 T 13-09-2016 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 ProSitePatterns PS00737 Thiolases signature 2. 329 345 - T 13-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 SUPERFAMILY SSF53901 3 260 4.29E-61 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 PANTHER PTHR18919:SF71 1 383 4.6E-173 T 13-09-2016 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 381 1.5E-112 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 Pfam PF00108 Thiolase, N-terminal domain 5 252 1.3E-47 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 Gene3D G3DSA:3.40.47.10 194 266 2.0E-50 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 Gene3D G3DSA:3.40.47.10 4 124 2.0E-50 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 PANTHER PTHR18919 1 383 4.6E-173 T 13-09-2016 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 SUPERFAMILY SSF53901 261 382 1.55E-40 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 Pfam PF02803 Thiolase, C-terminal domain 261 382 4.0E-42 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 PIRSF PIRSF000429 1 383 1.1E-106 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 Gene3D G3DSA:3.40.47.10 267 382 2.6E-53 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS11850 ec7459bdf2e08edb667ea16eec8053d1 383 Gene3D G3DSA:3.40.47.10 157 193 2.6E-53 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS22365 1d4dac3b8923d7224ddf75706096d1e2 97 SUPERFAMILY SSF160191 2 95 5.23E-34 T 13-09-2016 PMA3_RS22365 1d4dac3b8923d7224ddf75706096d1e2 97 Hamap MF_01866 Protein YcgL [ycgL]. 3 90 24.617 T 13-09-2016 IPR027354 YcgL domain PMA3_RS22365 1d4dac3b8923d7224ddf75706096d1e2 97 PANTHER PTHR38109 4 97 3.5E-33 T 13-09-2016 PMA3_RS22365 1d4dac3b8923d7224ddf75706096d1e2 97 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 4 83 3.0E-33 T 13-09-2016 IPR027354 YcgL domain PMA3_RS22365 1d4dac3b8923d7224ddf75706096d1e2 97 Pfam PF05166 YcgL domain 5 77 6.9E-30 T 13-09-2016 IPR027354 YcgL domain PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 Gene3D G3DSA:3.20.20.70 2 487 2.8E-204 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 PANTHER PTHR11911 1 280 4.2E-251 T 13-09-2016 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 84.894 T 13-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 SUPERFAMILY SSF51412 216 479 2.49E-128 T 13-09-2016 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 SUPERFAMILY SSF51412 2 90 2.49E-128 T 13-09-2016 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 SUPERFAMILY SSF54631 63 204 1.71E-26 T 13-09-2016 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 6.9E-192 T 13-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 Pfam PF00571 CBS domain 95 139 2.3E-9 T 13-09-2016 IPR000644 CBS domain PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 Pfam PF00571 CBS domain 148 200 4.1E-4 T 13-09-2016 IPR000644 CBS domain PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 SMART SM00116 96 143 3.6E-10 T 13-09-2016 IPR000644 CBS domain PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 SMART SM00116 157 205 0.0012 T 13-09-2016 IPR000644 CBS domain PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 13-09-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 6.0E-166 T 13-09-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 SMART SM01240 7 475 0.0 T 13-09-2016 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 PANTHER PTHR11911:SF6 298 487 4.2E-251 T 13-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 PANTHER PTHR11911:SF6 1 280 4.2E-251 T 13-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 PANTHER PTHR11911 298 487 4.2E-251 T 13-09-2016 PMA3_RS24145 100376de4a7dfc52dad381bc071f2db9 489 PIRSF PIRSF000130 1 489 2.9E-206 T 13-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PMA3_RS12260 4ef1270046580cf53638bc1c412c8013 235 TIGRFAM TIGR02458 CbtA: cobalt transporter subunit CbtA (proposed) 1 227 8.0E-87 T 13-09-2016 IPR012666 Cobalt transporter subunit CbtA, putative PMA3_RS12260 4ef1270046580cf53638bc1c412c8013 235 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 2 225 1.8E-65 T 13-09-2016 IPR012666 Cobalt transporter subunit CbtA, putative PMA3_RS18725 2ca48b19128869327fb386fe6ce00d4a 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS18725 2ca48b19128869327fb386fe6ce00d4a 236 PANTHER PTHR24220:SF469 9 223 3.0E-82 T 13-09-2016 PMA3_RS18725 2ca48b19128869327fb386fe6ce00d4a 236 PANTHER PTHR24220 9 223 3.0E-82 T 13-09-2016 PMA3_RS18725 2ca48b19128869327fb386fe6ce00d4a 236 Gene3D G3DSA:3.40.50.300 7 232 4.8E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18725 2ca48b19128869327fb386fe6ce00d4a 236 SMART SM00382 32 215 6.4E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS18725 2ca48b19128869327fb386fe6ce00d4a 236 SUPERFAMILY SSF52540 8 232 2.66E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18725 2ca48b19128869327fb386fe6ce00d4a 236 Pfam PF00005 ABC transporter 23 164 6.9E-24 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS04405 51ac5df9f301731ed5586257ca80da06 103 SUPERFAMILY SSF102705 2 101 1.14E-24 T 13-09-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PMA3_RS04405 51ac5df9f301731ed5586257ca80da06 103 Gene3D G3DSA:3.30.70.830 1 103 9.5E-45 T 13-09-2016 PMA3_RS04405 51ac5df9f301731ed5586257ca80da06 103 PANTHER PTHR13799:SF18 2 102 1.6E-52 T 13-09-2016 PMA3_RS04405 51ac5df9f301731ed5586257ca80da06 103 PANTHER PTHR13799 2 102 1.6E-52 T 13-09-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PMA3_RS25110 7bb7637d9a1425e0f06cf65c2985f5da 102 Gene3D G3DSA:3.30.160.100 1 93 5.2E-37 T 13-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PMA3_RS25110 7bb7637d9a1425e0f06cf65c2985f5da 102 SUPERFAMILY SSF69754 1 94 3.27E-35 T 13-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PMA3_RS25110 7bb7637d9a1425e0f06cf65c2985f5da 102 PANTHER PTHR33231 1 91 1.3E-37 T 13-09-2016 PMA3_RS25110 7bb7637d9a1425e0f06cf65c2985f5da 102 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.1E-27 T 13-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PMA3_RS25110 7bb7637d9a1425e0f06cf65c2985f5da 102 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.2E-34 T 13-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PMA3_RS26360 ab5fdb690dfbd0d7d9c33cdcfa82d7a4 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS26360 ab5fdb690dfbd0d7d9c33cdcfa82d7a4 496 SUPERFAMILY SSF53720 7 495 9.69E-164 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS26360 ab5fdb690dfbd0d7d9c33cdcfa82d7a4 496 Pfam PF00171 Aldehyde dehydrogenase family 31 491 3.3E-166 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26360 ab5fdb690dfbd0d7d9c33cdcfa82d7a4 496 Gene3D G3DSA:3.40.605.10 18 279 1.1E-88 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26360 ab5fdb690dfbd0d7d9c33cdcfa82d7a4 496 PANTHER PTHR11699:SF210 1 496 0.0 T 13-09-2016 PMA3_RS26360 ab5fdb690dfbd0d7d9c33cdcfa82d7a4 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS26360 ab5fdb690dfbd0d7d9c33cdcfa82d7a4 496 PANTHER PTHR11699 1 496 0.0 T 13-09-2016 PMA3_RS26360 ab5fdb690dfbd0d7d9c33cdcfa82d7a4 496 Gene3D G3DSA:3.40.309.10 280 467 2.0E-70 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS07595 16e581f2ea50ab2ce6fc79ff9189fcc7 144 PANTHER PTHR33452 1 143 8.8E-38 T 13-09-2016 PMA3_RS07595 16e581f2ea50ab2ce6fc79ff9189fcc7 144 Pfam PF07681 DoxX 16 103 5.6E-23 T 13-09-2016 IPR032808 DoxX family PMA3_RS07595 16e581f2ea50ab2ce6fc79ff9189fcc7 144 PANTHER PTHR33452:SF1 1 143 8.8E-38 T 13-09-2016 PMA3_RS15570 73fa8c493752f226da14e8e7be7ee91a 479 SUPERFAMILY SSF51338 1 66 8.1E-17 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS15570 73fa8c493752f226da14e8e7be7ee91a 479 PANTHER PTHR11647 1 479 0.0 T 13-09-2016 PMA3_RS15570 73fa8c493752f226da14e8e7be7ee91a 479 PANTHER PTHR11647:SF69 1 479 0.0 T 13-09-2016 PMA3_RS15570 73fa8c493752f226da14e8e7be7ee91a 479 Pfam PF01979 Amidohydrolase family 50 437 5.6E-29 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS15570 73fa8c493752f226da14e8e7be7ee91a 479 Gene3D G3DSA:2.30.40.10 377 460 2.6E-17 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS15570 73fa8c493752f226da14e8e7be7ee91a 479 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 455 4.4E-179 T 13-09-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 PMA3_RS15570 73fa8c493752f226da14e8e7be7ee91a 479 Gene3D G3DSA:3.20.20.140 68 376 4.0E-123 T 13-09-2016 PMA3_RS15570 73fa8c493752f226da14e8e7be7ee91a 479 Gene3D G3DSA:2.30.40.10 3 67 3.8E-32 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS15570 73fa8c493752f226da14e8e7be7ee91a 479 SUPERFAMILY SSF51556 54 383 1.64E-109 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS15570 73fa8c493752f226da14e8e7be7ee91a 479 SUPERFAMILY SSF51338 342 459 1.89E-41 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 5.3E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.3E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 218 5.3E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 199 5.3E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 SUPERFAMILY SSF51735 2 252 1.11E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 1.2E-6 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 199 1.2E-6 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 1.2E-6 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 PANTHER PTHR24322 7 41 1.0E-34 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 PANTHER PTHR24322 180 211 1.0E-34 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 PANTHER PTHR24322 67 157 1.0E-34 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 Gene3D G3DSA:3.40.50.720 2 250 2.3E-48 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 Pfam PF00106 short chain dehydrogenase 58 220 4.2E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11730 c810fd3dcec4d8c0c4403d7581e9ee2e 277 Pfam PF00106 short chain dehydrogenase 3 49 3.9E-7 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS20440 8e08b7bcc7875fa6037f49a88141eb7d 196 Gene3D G3DSA:1.10.1740.10 13 126 2.1E-32 T 13-09-2016 PMA3_RS20440 8e08b7bcc7875fa6037f49a88141eb7d 196 Pfam PF04545 Sigma-70, region 4 143 188 2.0E-11 T 13-09-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20440 8e08b7bcc7875fa6037f49a88141eb7d 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 189 1.7E-30 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20440 8e08b7bcc7875fa6037f49a88141eb7d 196 PANTHER PTHR30173 10 190 1.1E-86 T 13-09-2016 PMA3_RS20440 8e08b7bcc7875fa6037f49a88141eb7d 196 PANTHER PTHR30173:SF26 10 190 1.1E-86 T 13-09-2016 PMA3_RS20440 8e08b7bcc7875fa6037f49a88141eb7d 196 SUPERFAMILY SSF88659 132 190 3.74E-10 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20440 8e08b7bcc7875fa6037f49a88141eb7d 196 Pfam PF04542 Sigma-70 region 2 39 106 2.0E-19 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20440 8e08b7bcc7875fa6037f49a88141eb7d 196 Gene3D G3DSA:1.10.10.10 145 191 4.0E-10 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20440 8e08b7bcc7875fa6037f49a88141eb7d 196 SUPERFAMILY SSF88946 15 122 6.75E-27 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 507 525 - T 13-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 SUPERFAMILY SSF51120 481 602 1.83E-23 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 SUPERFAMILY SSF53474 127 262 7.74E-15 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 Gene3D G3DSA:2.150.10.10 492 605 9.7E-21 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 Gene3D G3DSA:2.150.10.10 355 441 1.3E-9 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 PRINTS PR00313 NodO calcium binding signature 379 390 7.1E-10 T 13-09-2016 PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 PRINTS PR00313 NodO calcium binding signature 409 417 7.1E-10 T 13-09-2016 PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 PRINTS PR00313 NodO calcium binding signature 520 529 7.1E-10 T 13-09-2016 PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 PRINTS PR00313 NodO calcium binding signature 493 501 7.1E-10 T 13-09-2016 PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 SUPERFAMILY SSF51120 318 443 9.55E-11 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 Gene3D G3DSA:3.40.50.1820 133 260 2.1E-8 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 528 545 0.17 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 401 416 12.0 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 372 389 0.0016 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 510 527 0.0062 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 493 509 0.095 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS13770 294ee89161b41629447e0d60add8ac9f 617 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 549 565 12.0 T 13-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PMA3_RS28005 227d27cb1e9f10c6a8d1470e9a7dfc8b 406 Gene3D G3DSA:3.40.50.620 91 213 8.0E-14 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS28005 227d27cb1e9f10c6a8d1470e9a7dfc8b 406 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 279 354 3.9E-24 T 13-09-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PMA3_RS28005 227d27cb1e9f10c6a8d1470e9a7dfc8b 406 PANTHER PTHR10909 241 391 2.4E-14 T 13-09-2016 PMA3_RS28005 227d27cb1e9f10c6a8d1470e9a7dfc8b 406 SUPERFAMILY SSF52467 278 393 1.31E-32 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS28005 227d27cb1e9f10c6a8d1470e9a7dfc8b 406 PANTHER PTHR10909:SF309 241 391 2.4E-14 T 13-09-2016 PMA3_RS28005 227d27cb1e9f10c6a8d1470e9a7dfc8b 406 Gene3D G3DSA:3.40.50.1220 273 395 1.5E-36 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS28005 227d27cb1e9f10c6a8d1470e9a7dfc8b 406 SMART SM00893 91 266 1.9E-7 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS28005 227d27cb1e9f10c6a8d1470e9a7dfc8b 406 Pfam PF01012 Electron transfer flavoprotein domain 97 210 2.1E-17 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS28005 227d27cb1e9f10c6a8d1470e9a7dfc8b 406 SUPERFAMILY SSF52402 91 215 1.15E-20 T 13-09-2016 PMA3_RS26375 f668ac44409d6f065b59e3cb1574de73 346 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 205 227 - T 13-09-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS26375 f668ac44409d6f065b59e3cb1574de73 346 SUPERFAMILY SSF51735 2 181 8.63E-21 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26375 f668ac44409d6f065b59e3cb1574de73 346 Gene3D G3DSA:3.30.360.10 172 321 3.0E-49 T 13-09-2016 PMA3_RS26375 f668ac44409d6f065b59e3cb1574de73 346 SUPERFAMILY SSF55347 160 325 7.19E-47 T 13-09-2016 PMA3_RS26375 f668ac44409d6f065b59e3cb1574de73 346 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 152 8.0E-5 T 13-09-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PMA3_RS26375 f668ac44409d6f065b59e3cb1574de73 346 Gene3D G3DSA:3.40.50.720 1 171 5.9E-42 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26375 f668ac44409d6f065b59e3cb1574de73 346 PANTHER PTHR21499:SF2 6 340 1.3E-97 T 13-09-2016 PMA3_RS26375 f668ac44409d6f065b59e3cb1574de73 346 PANTHER PTHR21499 6 340 1.3E-97 T 13-09-2016 PMA3_RS26375 f668ac44409d6f065b59e3cb1574de73 346 Pfam PF00742 Homoserine dehydrogenase 160 338 1.2E-57 T 13-09-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS26375 f668ac44409d6f065b59e3cb1574de73 346 PIRSF PIRSF036497 1 346 2.1E-102 T 13-09-2016 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS06180 5d6ea4b0eb7dbdaad2e199af11828156 154 SMART SM00226 1 149 8.4E-56 T 13-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PMA3_RS06180 5d6ea4b0eb7dbdaad2e199af11828156 154 SUPERFAMILY SSF52788 1 147 1.44E-49 T 13-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PMA3_RS06180 5d6ea4b0eb7dbdaad2e199af11828156 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 146 6.0E-43 T 13-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PMA3_RS06180 5d6ea4b0eb7dbdaad2e199af11828156 154 PANTHER PTHR11717 1 151 7.0E-59 T 13-09-2016 PMA3_RS06180 5d6ea4b0eb7dbdaad2e199af11828156 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 121 136 4.8E-25 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS06180 5d6ea4b0eb7dbdaad2e199af11828156 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 4.8E-25 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS06180 5d6ea4b0eb7dbdaad2e199af11828156 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 4.8E-25 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS06180 5d6ea4b0eb7dbdaad2e199af11828156 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 4.8E-25 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS06180 5d6ea4b0eb7dbdaad2e199af11828156 154 PANTHER PTHR11717:SF7 1 151 7.0E-59 T 13-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PMA3_RS06180 5d6ea4b0eb7dbdaad2e199af11828156 154 Gene3D G3DSA:3.40.50.270 1 150 8.2E-54 T 13-09-2016 PMA3_RS21395 deb8bc920d732be53b88f9c77e0e7a03 134 SUPERFAMILY SSF143100 2 64 1.7E-14 T 13-09-2016 PMA3_RS21395 deb8bc920d732be53b88f9c77e0e7a03 134 PANTHER PTHR34873 1 131 1.2E-17 T 13-09-2016 PMA3_RS21395 deb8bc920d732be53b88f9c77e0e7a03 134 PANTHER PTHR34873:SF2 1 131 1.2E-17 T 13-09-2016 PMA3_RS21395 deb8bc920d732be53b88f9c77e0e7a03 134 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 127 6.7E-40 T 13-09-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system PMA3_RS29180 df78cebe0697f18f77ef8fcdad63b3bd 210 Pfam PF01810 LysE type translocator 16 204 4.7E-31 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS29180 df78cebe0697f18f77ef8fcdad63b3bd 210 PANTHER PTHR30086:SF14 1 210 3.7E-91 T 13-09-2016 PMA3_RS29180 df78cebe0697f18f77ef8fcdad63b3bd 210 PIRSF PIRSF006324 1 207 5.9E-52 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS29180 df78cebe0697f18f77ef8fcdad63b3bd 210 PANTHER PTHR30086 1 210 3.7E-91 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS12865 4b06729486fe85e7a9a2e769b036ae06 161 PANTHER PTHR36155 1 161 4.5E-93 T 13-09-2016 PMA3_RS12865 4b06729486fe85e7a9a2e769b036ae06 161 Gene3D G3DSA:2.10.70.30 103 143 1.1E-29 T 13-09-2016 PMA3_RS12865 4b06729486fe85e7a9a2e769b036ae06 161 Gene3D G3DSA:3.40.1520.10 14 102 5.1E-49 T 13-09-2016 IPR007153 Adenosine specific kinase PMA3_RS12865 4b06729486fe85e7a9a2e769b036ae06 161 Pfam PF04008 Adenosine specific kinase 6 160 4.4E-73 T 13-09-2016 IPR007153 Adenosine specific kinase PMA3_RS12865 4b06729486fe85e7a9a2e769b036ae06 161 SUPERFAMILY SSF103165 1 160 5.62E-72 T 13-09-2016 IPR007153 Adenosine specific kinase PMA3_RS12865 4b06729486fe85e7a9a2e769b036ae06 161 PANTHER PTHR36155:SF1 1 161 4.5E-93 T 13-09-2016 PMA3_RS28175 7acc163bc89605ba653a020641f41429 163 Pfam PF01863 Protein of unknown function DUF45 93 154 4.2E-13 T 13-09-2016 IPR002725 Protein of unknown function DUF45 PMA3_RS28175 7acc163bc89605ba653a020641f41429 163 PANTHER PTHR30399 1 163 4.8E-92 T 13-09-2016 PMA3_RS28175 7acc163bc89605ba653a020641f41429 163 PANTHER PTHR30399:SF4 1 163 4.8E-92 T 13-09-2016 PMA3_RS15630 4ad03018ad391553683af85691da45b0 290 SUPERFAMILY SSF74650 5 286 8.16E-48 T 13-09-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PMA3_RS15630 4ad03018ad391553683af85691da45b0 290 PANTHER PTHR10091:SF5 20 289 1.1E-31 T 13-09-2016 PMA3_RS15630 4ad03018ad391553683af85691da45b0 290 Pfam PF01263 Aldose 1-epimerase 17 282 2.5E-29 T 13-09-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PMA3_RS15630 4ad03018ad391553683af85691da45b0 290 Gene3D G3DSA:2.70.98.10 5 279 3.8E-13 T 13-09-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PMA3_RS15630 4ad03018ad391553683af85691da45b0 290 PANTHER PTHR10091 20 289 1.1E-31 T 13-09-2016 PMA3_RS22095 ba1bfc076725e5fb297d053314a8c8b0 244 Pfam PF05988 Bacterial protein of unknown function (DUF899) 4 232 6.4E-95 T 13-09-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like PMA3_RS22095 ba1bfc076725e5fb297d053314a8c8b0 244 Gene3D G3DSA:3.40.30.10 60 226 5.6E-6 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS22095 ba1bfc076725e5fb297d053314a8c8b0 244 SUPERFAMILY SSF52833 50 155 2.31E-8 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS21970 473e36d5566474ee51ce61817b1a6d18 95 SUPERFAMILY SSF52833 5 89 3.8E-29 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS21970 473e36d5566474ee51ce61817b1a6d18 95 PANTHER PTHR36417:SF1 1 93 7.1E-57 T 13-09-2016 PMA3_RS21970 473e36d5566474ee51ce61817b1a6d18 95 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 8 79 2.8E-21 T 13-09-2016 IPR011893 Selenoprotein, Rdx type PMA3_RS21970 473e36d5566474ee51ce61817b1a6d18 95 PANTHER PTHR36417 1 93 7.1E-57 T 13-09-2016 PMA3_RS21970 473e36d5566474ee51ce61817b1a6d18 95 Gene3D G3DSA:3.40.30.10 2 94 1.9E-45 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS21970 473e36d5566474ee51ce61817b1a6d18 95 Pfam PF10262 Rdx family 8 80 1.3E-32 T 13-09-2016 IPR011893 Selenoprotein, Rdx type PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 Hamap MF_00006 Argininosuccinate lyase [argH]. 8 459 43.894 T 13-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 5.1E-70 T 13-09-2016 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 5.1E-70 T 13-09-2016 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 5.1E-70 T 13-09-2016 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 5.1E-70 T 13-09-2016 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 5.1E-70 T 13-09-2016 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 5.1E-70 T 13-09-2016 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 Pfam PF14698 Argininosuccinate lyase C-terminal 369 437 3.1E-25 T 13-09-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 Gene3D G3DSA:1.20.200.10 113 380 1.9E-106 T 13-09-2016 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 13-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 5.0E-30 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 5.0E-30 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 5.0E-30 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 5.0E-30 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PANTHER PTHR11444 7 461 5.4E-235 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 Gene3D G3DSA:1.10.40.30 381 438 7.8E-31 T 13-09-2016 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 457 7.5E-194 T 13-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 Gene3D G3DSA:1.10.275.10 8 112 7.2E-42 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 PANTHER PTHR11444:SF3 7 461 5.4E-235 T 13-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 Pfam PF00206 Lyase 12 306 9.8E-76 T 13-09-2016 IPR022761 Fumarate lyase, N-terminal PMA3_RS29245 fb7805dc2e4dadfb8b753c1f23f9db71 464 SUPERFAMILY SSF48557 10 456 4.24E-153 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS30055 07d8962d9f73933c2763721ca10754db 214 Gene3D G3DSA:3.40.50.150 4 212 9.1E-66 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS30055 07d8962d9f73933c2763721ca10754db 214 Pfam PF02527 rRNA small subunit methyltransferase G 28 207 8.0E-63 T 13-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PMA3_RS30055 07d8962d9f73933c2763721ca10754db 214 PANTHER PTHR31760:SF0 10 212 5.1E-71 T 13-09-2016 PMA3_RS30055 07d8962d9f73933c2763721ca10754db 214 PIRSF PIRSF003078 6 214 5.3E-58 T 13-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PMA3_RS30055 07d8962d9f73933c2763721ca10754db 214 PANTHER PTHR31760 10 212 5.1E-71 T 13-09-2016 PMA3_RS30055 07d8962d9f73933c2763721ca10754db 214 SUPERFAMILY SSF53335 13 212 9.05E-38 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS30055 07d8962d9f73933c2763721ca10754db 214 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 21 209 27.327 T 13-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PMA3_RS30055 07d8962d9f73933c2763721ca10754db 214 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 33 211 9.6E-55 T 13-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PMA3_RS18535 0bf2960096ccc7d742b5dc6c6b663547 268 Hamap MF_01830 UPF0317 protein . 14 268 52.771 T 13-09-2016 IPR016938 Uncharacterised protein family UPF0317 PMA3_RS18535 0bf2960096ccc7d742b5dc6c6b663547 268 Gene3D G3DSA:3.40.1640.10 7 170 4.5E-66 T 13-09-2016 PMA3_RS18535 0bf2960096ccc7d742b5dc6c6b663547 268 PANTHER PTHR32022 1 266 1.7E-137 T 13-09-2016 PMA3_RS18535 0bf2960096ccc7d742b5dc6c6b663547 268 Pfam PF07286 Protein of unknown function (DUF1445) 118 260 1.2E-66 T 13-09-2016 IPR009906 Protein of unknown function DUF1445 PMA3_RS18535 0bf2960096ccc7d742b5dc6c6b663547 268 SUPERFAMILY SSF160920 14 261 9.81E-114 T 13-09-2016 PMA3_RS18535 0bf2960096ccc7d742b5dc6c6b663547 268 PIRSF PIRSF029755 2 268 1.4E-121 T 13-09-2016 IPR016938 Uncharacterised protein family UPF0317 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 Gene3D G3DSA:1.20.1600.10 358 472 4.0E-87 T 13-09-2016 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 Gene3D G3DSA:1.20.1600.10 148 320 4.0E-87 T 13-09-2016 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 Gene3D G3DSA:1.20.1600.10 56 96 4.0E-87 T 13-09-2016 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 471 4.3E-130 T 13-09-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 PANTHER PTHR30203 10 488 2.1E-155 T 13-09-2016 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 Gene3D G3DSA:2.20.200.10 321 356 4.7E-17 T 13-09-2016 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 Gene3D G3DSA:2.20.200.10 106 147 4.7E-17 T 13-09-2016 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 Pfam PF02321 Outer membrane efflux protein 70 260 7.1E-22 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 Pfam PF02321 Outer membrane efflux protein 291 469 8.8E-25 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 PANTHER PTHR30203:SF6 10 488 2.1E-155 T 13-09-2016 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 SUPERFAMILY SSF56954 5 31 2.49E-97 T 13-09-2016 PMA3_RS19840 a00c43e0b3368b79af96e8b8e92602ab 489 SUPERFAMILY SSF56954 61 474 2.49E-97 T 13-09-2016 PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 PANTHER PTHR24322:SF320 10 132 9.7E-27 T 13-09-2016 PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 PANTHER PTHR24322:SF320 148 178 9.7E-27 T 13-09-2016 PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 SUPERFAMILY SSF51735 8 235 1.03E-38 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 PANTHER PTHR24322 10 132 9.7E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 Pfam PF00106 short chain dehydrogenase 8 179 3.3E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.1E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.1E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 4.1E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 Gene3D G3DSA:3.40.50.720 8 235 2.5E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 PANTHER PTHR24322 148 178 9.7E-27 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24890 d3bbcd91877e09e414cc8c971df51628 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS12190 7aadb9db4f33941bf166b78f2fba10ca 104 Pfam PF02036 SCP-2 sterol transfer family 17 102 1.7E-16 T 13-09-2016 IPR003033 SCP2 sterol-binding domain PMA3_RS12190 7aadb9db4f33941bf166b78f2fba10ca 104 SUPERFAMILY SSF55718 3 102 4.47E-26 T 13-09-2016 IPR003033 SCP2 sterol-binding domain PMA3_RS12190 7aadb9db4f33941bf166b78f2fba10ca 104 Gene3D G3DSA:3.30.1050.10 3 103 2.9E-26 T 13-09-2016 IPR003033 SCP2 sterol-binding domain PMA3_RS12190 7aadb9db4f33941bf166b78f2fba10ca 104 PANTHER PTHR10094 23 102 1.7E-20 T 13-09-2016 PMA3_RS12190 7aadb9db4f33941bf166b78f2fba10ca 104 PANTHER PTHR10094:SF13 23 102 1.7E-20 T 13-09-2016 PMA3_RS10830 ff07dcb01f606448ed9de94acf842402 533 PANTHER PTHR32089:SF34 76 362 6.4E-82 T 13-09-2016 PMA3_RS10830 ff07dcb01f606448ed9de94acf842402 533 SMART SM00283 84 359 3.7E-41 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS10830 ff07dcb01f606448ed9de94acf842402 533 Gene3D G3DSA:1.10.287.950 113 325 1.6E-47 T 13-09-2016 PMA3_RS10830 ff07dcb01f606448ed9de94acf842402 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 152 355 4.3E-45 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS10830 ff07dcb01f606448ed9de94acf842402 533 PANTHER PTHR32089 76 362 6.4E-82 T 13-09-2016 PMA3_RS10830 ff07dcb01f606448ed9de94acf842402 533 SUPERFAMILY SSF58104 90 358 1.96E-55 T 13-09-2016 PMA3_RS05645 8e78d15a01ac3b4ac1c1df56da279f5e 448 Pfam PF04996 Succinylarginine dihydrolase 3 446 7.3E-223 T 13-09-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 PMA3_RS05645 8e78d15a01ac3b4ac1c1df56da279f5e 448 PANTHER PTHR30420 2 447 1.1E-297 T 13-09-2016 PMA3_RS05645 8e78d15a01ac3b4ac1c1df56da279f5e 448 PANTHER PTHR30420:SF2 2 447 1.1E-297 T 13-09-2016 PMA3_RS05645 8e78d15a01ac3b4ac1c1df56da279f5e 448 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 446 1.7E-244 T 13-09-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 PMA3_RS05645 8e78d15a01ac3b4ac1c1df56da279f5e 448 SUPERFAMILY SSF55909 3 446 1.28E-204 T 13-09-2016 PMA3_RS05645 8e78d15a01ac3b4ac1c1df56da279f5e 448 Gene3D G3DSA:3.75.10.20 1 447 5.7E-226 T 13-09-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 PMA3_RS05645 8e78d15a01ac3b4ac1c1df56da279f5e 448 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 447 60.277 T 13-09-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 SUPERFAMILY SSF158472 171 224 2.35E-7 T 13-09-2016 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 SUPERFAMILY SSF47384 209 290 2.35E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 438 1.4E-15 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 Gene3D G3DSA:3.30.565.10 293 440 1.2E-34 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 PANTHER PTHR24423 164 438 9.7E-58 T 13-09-2016 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 3.2E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 3.2E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 3.2E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 289 1.3E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 SMART SM00388 226 290 2.9E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 SUPERFAMILY SSF55874 280 439 2.75E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 Pfam PF00672 HAMP domain 153 221 1.4E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 Gene3D G3DSA:1.10.287.130 218 286 7.6E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 PANTHER PTHR24423:SF477 164 438 9.7E-58 T 13-09-2016 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 SMART SM00304 170 225 1.6E-4 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS21925 cbb9f13ced11261f03efd322c9cbbadd 446 SMART SM00387 331 440 2.1E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS10920 fc4f4ff68d983ebf88deedbb5d2febb8 457 Pfam PF03641 Possible lysine decarboxylase 192 331 8.2E-31 T 13-09-2016 IPR031100 LOG family PMA3_RS10920 fc4f4ff68d983ebf88deedbb5d2febb8 457 PANTHER PTHR31223 89 344 1.5E-168 T 13-09-2016 PMA3_RS10920 fc4f4ff68d983ebf88deedbb5d2febb8 457 PANTHER PTHR31223 361 386 1.5E-168 T 13-09-2016 PMA3_RS10920 fc4f4ff68d983ebf88deedbb5d2febb8 457 Pfam PF14793 Domain of unknown function (DUF4478) 10 116 5.8E-44 T 13-09-2016 IPR027820 Domain of unknown function DUF4478 PMA3_RS10920 fc4f4ff68d983ebf88deedbb5d2febb8 457 PANTHER PTHR31223:SF12 89 344 1.5E-168 T 13-09-2016 PMA3_RS10920 fc4f4ff68d983ebf88deedbb5d2febb8 457 PANTHER PTHR31223:SF12 361 386 1.5E-168 T 13-09-2016 PMA3_RS10920 fc4f4ff68d983ebf88deedbb5d2febb8 457 Gene3D G3DSA:3.30.1850.10 7 118 3.0E-49 T 13-09-2016 IPR027820 Domain of unknown function DUF4478 PMA3_RS10920 fc4f4ff68d983ebf88deedbb5d2febb8 457 Pfam PF11892 Domain of unknown function (DUF3412) 336 456 4.1E-56 T 13-09-2016 IPR021826 Protein of unknown function DUF3412 PMA3_RS10920 fc4f4ff68d983ebf88deedbb5d2febb8 457 Gene3D G3DSA:3.40.50.450 128 455 2.0E-121 T 13-09-2016 PMA3_RS10920 fc4f4ff68d983ebf88deedbb5d2febb8 457 SUPERFAMILY SSF102405 124 331 1.53E-41 T 13-09-2016 PMA3_RS19130 f92f1061183172e94ede96fb7c079031 224 Pfam PF11769 Protein of unknown function (DUF3313) 17 218 9.7E-48 T 13-09-2016 IPR021747 Protein of unknown function DUF3313 PMA3_RS21355 9ef4fb8a3d77bcb3bb6e3f80e6b9de17 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 4.7E-125 T 13-09-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 PMA3_RS21355 9ef4fb8a3d77bcb3bb6e3f80e6b9de17 260 PIRSF PIRSF006241 1 259 3.3E-93 T 13-09-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 PMA3_RS21355 9ef4fb8a3d77bcb3bb6e3f80e6b9de17 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 2.1E-32 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS21355 9ef4fb8a3d77bcb3bb6e3f80e6b9de17 260 PANTHER PTHR12110 1 255 3.7E-102 T 13-09-2016 PMA3_RS21355 9ef4fb8a3d77bcb3bb6e3f80e6b9de17 260 Gene3D G3DSA:3.20.20.150 1 255 2.3E-91 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS21355 9ef4fb8a3d77bcb3bb6e3f80e6b9de17 260 SUPERFAMILY SSF51658 1 256 3.61E-87 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS21355 9ef4fb8a3d77bcb3bb6e3f80e6b9de17 260 PANTHER PTHR12110:SF3 1 255 3.7E-102 T 13-09-2016 PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 196 4.1E-4 T 13-09-2016 PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 Gene3D G3DSA:3.40.50.720 6 249 1.7E-84 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 SUPERFAMILY SSF51735 11 249 1.18E-81 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 3.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 3.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.6E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 5.5E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 5.5E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 5.5E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.6E-63 T 13-09-2016 PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PANTHER PTHR24322 160 191 1.6E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 PANTHER PTHR24322 16 144 1.6E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11750 1ede80f666f6aa145d60802c14237fbc 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS24495 a93aa6e6440ff8ac388c957e06a632d8 271 PANTHER PTHR30269:SF7 1 270 9.6E-98 T 13-09-2016 PMA3_RS24495 a93aa6e6440ff8ac388c957e06a632d8 271 Pfam PF01925 Sulfite exporter TauE/SafE 8 268 5.8E-37 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS24495 a93aa6e6440ff8ac388c957e06a632d8 271 PANTHER PTHR30269 1 270 9.6E-98 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 PANTHER PTHR24960:SF45 3 395 2.6E-171 T 13-09-2016 PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 472 6.3E-169 T 13-09-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 Gene3D G3DSA:3.30.70.20 227 283 6.1E-7 T 13-09-2016 PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 SUPERFAMILY SSF54862 109 130 6.28E-31 T 13-09-2016 PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 SUPERFAMILY SSF54862 176 363 6.28E-31 T 13-09-2016 PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 Gene3D G3DSA:2.60.40.10 358 473 6.0E-30 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 Pfam PF12801 4Fe-4S binding domain 100 132 1.5E-6 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 473 7.1E-28 T 13-09-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 Pfam PF13746 4Fe-4S dicluster domain 222 328 2.3E-43 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 PANTHER PTHR24960 3 395 2.6E-171 T 13-09-2016 PMA3_RS14990 1cf1801a626d1a2595491276dafb3d69 476 Gene3D G3DSA:3.30.70.20 284 311 5.5E-5 T 13-09-2016 PMA3_RS22520 7379c05dcfab2dcc456e4c78f7917340 79 Pfam PF01206 Sulfurtransferase TusA 10 78 3.5E-22 T 13-09-2016 IPR001455 TusA-like domain PMA3_RS22520 7379c05dcfab2dcc456e4c78f7917340 79 SUPERFAMILY SSF64307 6 78 7.72E-23 T 13-09-2016 IPR001455 TusA-like domain PMA3_RS22520 7379c05dcfab2dcc456e4c78f7917340 79 PANTHER PTHR33279 8 78 8.5E-22 T 13-09-2016 PMA3_RS22520 7379c05dcfab2dcc456e4c78f7917340 79 Gene3D G3DSA:3.30.110.40 6 78 3.3E-27 T 13-09-2016 IPR001455 TusA-like domain PMA3_RS22520 7379c05dcfab2dcc456e4c78f7917340 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 11 35 - T 13-09-2016 IPR001455 TusA-like domain PMA3_RS08495 1bd69260a851ccd8eb87f18e0a56414f 332 PANTHER PTHR10366:SF360 6 260 2.3E-105 T 13-09-2016 PMA3_RS08495 1bd69260a851ccd8eb87f18e0a56414f 332 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 321 4.3E-165 T 13-09-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 PMA3_RS08495 1bd69260a851ccd8eb87f18e0a56414f 332 Pfam PF02719 Polysaccharide biosynthesis protein 7 278 2.3E-98 T 13-09-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PMA3_RS08495 1bd69260a851ccd8eb87f18e0a56414f 332 SUPERFAMILY SSF51735 1 265 1.24E-50 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08495 1bd69260a851ccd8eb87f18e0a56414f 332 PANTHER PTHR10366 6 260 2.3E-105 T 13-09-2016 PMA3_RS08495 1bd69260a851ccd8eb87f18e0a56414f 332 Gene3D G3DSA:3.40.50.720 2 245 1.5E-44 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS21935 b635fcd4b23cf4d445e8da8cbc7377f9 484 Pfam PF02386 Cation transport protein 44 478 1.8E-54 T 13-09-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PMA3_RS21935 b635fcd4b23cf4d445e8da8cbc7377f9 484 PIRSF PIRSF006247 1 484 6.0E-171 T 13-09-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 PMA3_RS21935 b635fcd4b23cf4d445e8da8cbc7377f9 484 PANTHER PTHR32024 3 483 1.4E-288 T 13-09-2016 PMA3_RS21935 b635fcd4b23cf4d445e8da8cbc7377f9 484 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 88 467 1.8E-99 T 13-09-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 PMA3_RS21935 b635fcd4b23cf4d445e8da8cbc7377f9 484 PANTHER PTHR32024:SF3 3 483 1.4E-288 T 13-09-2016 PMA3_RS19150 60f6e479dcb3d5ef4d560fa3c05d5abd 286 SUPERFAMILY SSF51197 44 259 1.19E-5 T 13-09-2016 PMA3_RS27625 59f97767a8086c77cb087a2edbb8c7be 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.2E-16 T 13-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27625 59f97767a8086c77cb087a2edbb8c7be 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.2E-16 T 13-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27625 59f97767a8086c77cb087a2edbb8c7be 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.2E-16 T 13-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27625 59f97767a8086c77cb087a2edbb8c7be 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.2E-16 T 13-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27625 59f97767a8086c77cb087a2edbb8c7be 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 13-09-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27625 59f97767a8086c77cb087a2edbb8c7be 71 Pfam PF01165 Ribosomal protein S21 4 56 2.3E-22 T 13-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27625 59f97767a8086c77cb087a2edbb8c7be 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 13-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27625 59f97767a8086c77cb087a2edbb8c7be 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.3E-25 T 13-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27625 59f97767a8086c77cb087a2edbb8c7be 71 PANTHER PTHR21109 1 63 1.3E-25 T 13-09-2016 PMA3_RS27625 59f97767a8086c77cb087a2edbb8c7be 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.978 T 13-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PMA3_RS01825 5fbaa91c960a17fe9aec2ad25fe17749 376 PANTHER PTHR12526:SF397 81 366 3.0E-48 T 13-09-2016 PMA3_RS01825 5fbaa91c960a17fe9aec2ad25fe17749 376 Gene3D G3DSA:3.40.50.2000 163 342 3.8E-31 T 13-09-2016 PMA3_RS01825 5fbaa91c960a17fe9aec2ad25fe17749 376 SUPERFAMILY SSF53756 15 365 2.1E-61 T 13-09-2016 PMA3_RS01825 5fbaa91c960a17fe9aec2ad25fe17749 376 PANTHER PTHR12526 81 366 3.0E-48 T 13-09-2016 PMA3_RS01825 5fbaa91c960a17fe9aec2ad25fe17749 376 Pfam PF00534 Glycosyl transferases group 1 184 340 2.9E-30 T 13-09-2016 IPR001296 Glycosyl transferase, family 1 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 SUPERFAMILY SSF52743 726 1065 1.22E-48 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 Pfam PF00082 Subtilase family 797 1033 2.5E-20 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 SUPERFAMILY SSF49785 1101 1209 2.59E-25 T 13-09-2016 IPR008979 Galactose-binding domain-like PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 SUPERFAMILY SSF51120 1213 1383 5.62E-17 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 Gene3D G3DSA:3.40.50.200 725 1066 8.4E-60 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 PANTHER PTHR10795 879 1220 1.2E-33 T 13-09-2016 IPR015500 Peptidase S8, subtilisin-related PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 PRINTS PR00313 NodO calcium binding signature 402 410 4.0E-7 T 13-09-2016 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 PRINTS PR00313 NodO calcium binding signature 372 383 4.0E-7 T 13-09-2016 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 PRINTS PR00313 NodO calcium binding signature 533 542 4.0E-7 T 13-09-2016 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 PRINTS PR00313 NodO calcium binding signature 479 487 4.0E-7 T 13-09-2016 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 PANTHER PTHR10795 726 860 1.2E-33 T 13-09-2016 IPR015500 Peptidase S8, subtilisin-related PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 PANTHER PTHR10795 13 25 1.2E-33 T 13-09-2016 IPR015500 Peptidase S8, subtilisin-related PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 SUPERFAMILY SSF51120 400 588 3.66E-17 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 SUPERFAMILY SSF51120 323 430 3.66E-7 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 Gene3D G3DSA:2.150.10.10 422 609 5.9E-19 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 Gene3D G3DSA:2.150.10.10 1212 1379 4.6E-14 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 Gene3D G3DSA:2.150.10.10 349 421 4.3E-5 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 Gene3D G3DSA:2.60.120.260 1106 1207 2.7E-25 T 13-09-2016 IPR008979 Galactose-binding domain-like PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 985 995 - T 13-09-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 PANTHER PTHR10795:SF416 879 1220 1.2E-33 T 13-09-2016 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 Pfam PF01483 Proprotein convertase P-domain 1107 1205 1.8E-23 T 13-09-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 PANTHER PTHR10795:SF416 726 860 1.2E-33 T 13-09-2016 PMA3_RS24975 54fc55d471e32349bd311388aeb612ff 1639 PANTHER PTHR10795:SF416 13 25 1.2E-33 T 13-09-2016 PMA3_RS10855 709858e118aa7f162b6ec4e433464d7d 338 PANTHER PTHR30177:SF14 249 320 2.5E-118 T 13-09-2016 PMA3_RS10855 709858e118aa7f162b6ec4e433464d7d 338 Gene3D G3DSA:3.40.190.100 112 268 9.6E-43 T 13-09-2016 PMA3_RS10855 709858e118aa7f162b6ec4e433464d7d 338 Gene3D G3DSA:3.40.190.10 269 327 2.9E-19 T 13-09-2016 PMA3_RS10855 709858e118aa7f162b6ec4e433464d7d 338 Gene3D G3DSA:3.40.190.10 29 111 2.9E-19 T 13-09-2016 PMA3_RS10855 709858e118aa7f162b6ec4e433464d7d 338 SUPERFAMILY SSF53850 26 332 8.32E-79 T 13-09-2016 PMA3_RS10855 709858e118aa7f162b6ec4e433464d7d 338 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 316 5.6E-61 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS10855 709858e118aa7f162b6ec4e433464d7d 338 PANTHER PTHR30177:SF14 31 233 2.5E-118 T 13-09-2016 PMA3_RS10855 709858e118aa7f162b6ec4e433464d7d 338 PANTHER PTHR30177 249 320 2.5E-118 T 13-09-2016 PMA3_RS10855 709858e118aa7f162b6ec4e433464d7d 338 PANTHER PTHR30177 31 233 2.5E-118 T 13-09-2016 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 Gene3D G3DSA:3.30.450.40 158 202 8.4E-4 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 420 435 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 Pfam PF02954 Bacterial regulatory protein, Fis family 593 633 5.0E-14 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 SUPERFAMILY SSF52540 349 573 6.41E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 SMART SM00382 353 496 8.1E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 542 551 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 357 370 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 Pfam PF00158 Sigma-54 interaction domain 337 499 1.6E-61 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 Gene3D G3DSA:1.10.10.60 583 635 1.2E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 PANTHER PTHR32071:SF5 284 637 9.2E-152 T 13-09-2016 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 SUPERFAMILY SSF46689 542 635 3.29E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 599 616 1.8E-9 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 616 636 1.8E-9 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 Gene3D G3DSA:3.30.450.20 236 311 2.7E-6 T 13-09-2016 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 SUPERFAMILY SSF55785 235 311 6.93E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 PANTHER PTHR32071 284 637 9.2E-152 T 13-09-2016 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 Gene3D G3DSA:3.40.50.300 338 505 8.0E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 Gene3D G3DSA:1.10.8.60 520 576 2.7E-14 T 13-09-2016 PMA3_RS26690 9a97a5f6a989c857fd6169f82b48d5ee 637 SUPERFAMILY SSF55781 69 207 1.7E-9 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS00025 7ab879058dfbca935469103ba94aa558 160 PANTHER PTHR33202:SF6 6 158 8.3E-69 T 13-09-2016 PMA3_RS00025 7ab879058dfbca935469103ba94aa558 160 SUPERFAMILY SSF46785 24 155 4.89E-30 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00025 7ab879058dfbca935469103ba94aa558 160 Gene3D G3DSA:1.10.10.10 22 92 1.0E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00025 7ab879058dfbca935469103ba94aa558 160 Pfam PF01475 Ferric uptake regulator family 31 150 6.3E-10 T 13-09-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PMA3_RS00025 7ab879058dfbca935469103ba94aa558 160 PANTHER PTHR33202 6 158 8.3E-69 T 13-09-2016 PMA3_RS16235 e3728d57401dbca26784433918bb6cbb 331 Pfam PF01136 Peptidase family U32 75 330 1.3E-63 T 13-09-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS16235 e3728d57401dbca26784433918bb6cbb 331 PANTHER PTHR30217:SF3 240 330 5.4E-185 T 13-09-2016 PMA3_RS16235 e3728d57401dbca26784433918bb6cbb 331 PANTHER PTHR30217:SF3 1 218 5.4E-185 T 13-09-2016 PMA3_RS16235 e3728d57401dbca26784433918bb6cbb 331 PANTHER PTHR30217 240 330 5.4E-185 T 13-09-2016 PMA3_RS16235 e3728d57401dbca26784433918bb6cbb 331 PANTHER PTHR30217 1 218 5.4E-185 T 13-09-2016 PMA3_RS16235 e3728d57401dbca26784433918bb6cbb 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 13-09-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 Gene3D G3DSA:3.40.190.10 196 261 1.6E-6 T 13-09-2016 PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 SUPERFAMILY SSF53850 90 289 9.23E-20 T 13-09-2016 PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 Pfam PF03466 LysR substrate binding domain 88 288 7.5E-21 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 SUPERFAMILY SSF46785 3 85 6.35E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 PANTHER PTHR30126:SF2 1 290 2.1E-83 T 13-09-2016 PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 Gene3D G3DSA:1.10.10.10 2 81 1.1E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.7E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 Gene3D G3DSA:3.40.190.10 82 195 1.2E-8 T 13-09-2016 PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 PANTHER PTHR30126 1 290 2.1E-83 T 13-09-2016 PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.7E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.7E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19035 c115d32fde8d91c25d03082a2c8360d2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.7E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12730 dbd7d287443a91902ef57dd6c51cd4f2 311 SUPERFAMILY SSF103481 210 292 2.35E-5 T 13-09-2016 PMA3_RS12730 dbd7d287443a91902ef57dd6c51cd4f2 311 PANTHER PTHR32322:SF10 15 290 1.9E-71 T 13-09-2016 PMA3_RS12730 dbd7d287443a91902ef57dd6c51cd4f2 311 PANTHER PTHR32322 15 290 1.9E-71 T 13-09-2016 PMA3_RS12730 dbd7d287443a91902ef57dd6c51cd4f2 311 Pfam PF00892 EamA-like transporter family 156 289 4.4E-9 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS12730 dbd7d287443a91902ef57dd6c51cd4f2 311 Pfam PF00892 EamA-like transporter family 15 143 9.1E-13 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS12730 dbd7d287443a91902ef57dd6c51cd4f2 311 SUPERFAMILY SSF103481 46 145 5.49E-10 T 13-09-2016 PMA3_RS04520 4bd2d184a8a53769d5ff458fd1a96d42 180 SUPERFAMILY SSF52980 2 177 1.82E-61 T 13-09-2016 IPR011335 Restriction endonuclease type II-like PMA3_RS04520 4bd2d184a8a53769d5ff458fd1a96d42 180 SMART SM01322 1 174 1.1E-88 T 13-09-2016 IPR009822 YaeQ PMA3_RS04520 4bd2d184a8a53769d5ff458fd1a96d42 180 PANTHER PTHR38784 1 180 1.1E-81 T 13-09-2016 PMA3_RS04520 4bd2d184a8a53769d5ff458fd1a96d42 180 Pfam PF07152 YaeQ protein 1 171 1.8E-61 T 13-09-2016 IPR009822 YaeQ PMA3_RS04520 4bd2d184a8a53769d5ff458fd1a96d42 180 PIRSF PIRSF011484 1 178 3.7E-52 T 13-09-2016 IPR009822 YaeQ PMA3_RS04520 4bd2d184a8a53769d5ff458fd1a96d42 180 Gene3D G3DSA:3.10.640.10 1 176 1.1E-67 T 13-09-2016 PMA3_RS04520 4bd2d184a8a53769d5ff458fd1a96d42 180 PANTHER PTHR38784:SF1 1 180 1.1E-81 T 13-09-2016 PMA3_RS22305 26a6f75e79a811591ac47322dafdd2bb 258 SUPERFAMILY SSF56235 2 251 1.29E-53 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS22305 26a6f75e79a811591ac47322dafdd2bb 258 PANTHER PTHR11907:SF10 1 250 1.7E-116 T 13-09-2016 PMA3_RS22305 26a6f75e79a811591ac47322dafdd2bb 258 Pfam PF13230 Glutamine amidotransferases class-II 1 256 3.9E-109 T 13-09-2016 IPR026869 Putative glutamine amidotransferase type 2 PMA3_RS22305 26a6f75e79a811591ac47322dafdd2bb 258 PANTHER PTHR11907 1 250 1.7E-116 T 13-09-2016 PMA3_RS22305 26a6f75e79a811591ac47322dafdd2bb 258 Gene3D G3DSA:3.60.20.10 1 253 1.9E-66 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS00125 ce76bbb5a942c85207d1e554427bc633 243 PANTHER PTHR11002:SF13 9 234 5.9E-88 T 13-09-2016 PMA3_RS00125 ce76bbb5a942c85207d1e554427bc633 243 PANTHER PTHR11002 9 234 5.9E-88 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS00125 ce76bbb5a942c85207d1e554427bc633 243 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 64 71 - T 13-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS00125 ce76bbb5a942c85207d1e554427bc633 243 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 107 127 - T 13-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS00125 ce76bbb5a942c85207d1e554427bc633 243 Gene3D G3DSA:3.40.1050.10 6 229 4.6E-75 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS00125 ce76bbb5a942c85207d1e554427bc633 243 SMART SM00947 52 219 4.8E-65 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS00125 ce76bbb5a942c85207d1e554427bc633 243 Pfam PF00484 Carbonic anhydrase 59 214 4.3E-52 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS00125 ce76bbb5a942c85207d1e554427bc633 243 SUPERFAMILY SSF53056 15 230 7.33E-70 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS17150 98c9c6c1468f86afe89d5a17ee50ae03 265 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS17150 98c9c6c1468f86afe89d5a17ee50ae03 265 Gene3D G3DSA:3.40.50.300 3 234 1.1E-50 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17150 98c9c6c1468f86afe89d5a17ee50ae03 265 Pfam PF00005 ABC transporter 19 174 1.0E-26 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS17150 98c9c6c1468f86afe89d5a17ee50ae03 265 SMART SM00382 28 224 1.3E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS17150 98c9c6c1468f86afe89d5a17ee50ae03 265 SUPERFAMILY SSF52540 3 234 1.36E-47 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17150 98c9c6c1468f86afe89d5a17ee50ae03 265 PANTHER PTHR24220:SF408 4 254 1.1E-80 T 13-09-2016 PMA3_RS17150 98c9c6c1468f86afe89d5a17ee50ae03 265 PANTHER PTHR24220 4 254 1.1E-80 T 13-09-2016 PMA3_RS08745 a2df069e607b534c9df7a7de10f5c4c2 229 PANTHER PTHR30035 24 228 1.2E-77 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS08745 a2df069e607b534c9df7a7de10f5c4c2 229 PANTHER PTHR30035:SF3 24 228 1.2E-77 T 13-09-2016 PMA3_RS08745 a2df069e607b534c9df7a7de10f5c4c2 229 Pfam PF04333 MlaA lipoprotein 29 218 3.7E-73 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS08745 a2df069e607b534c9df7a7de10f5c4c2 229 PRINTS PR01805 VacJ lipoprotein signature 134 151 2.2E-26 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS08745 a2df069e607b534c9df7a7de10f5c4c2 229 PRINTS PR01805 VacJ lipoprotein signature 47 63 2.2E-26 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS08745 a2df069e607b534c9df7a7de10f5c4c2 229 PRINTS PR01805 VacJ lipoprotein signature 30 43 2.2E-26 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS08745 a2df069e607b534c9df7a7de10f5c4c2 229 PRINTS PR01805 VacJ lipoprotein signature 98 115 2.2E-26 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS06660 98f6accc1c79cb3646a87635bd4ddd0a 212 Gene3D G3DSA:1.10.10.60 4 47 1.3E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS06660 98f6accc1c79cb3646a87635bd4ddd0a 212 PANTHER PTHR30055:SF40 2 197 2.5E-64 T 13-09-2016 PMA3_RS06660 98f6accc1c79cb3646a87635bd4ddd0a 212 Gene3D G3DSA:1.10.10.60 48 69 2.4E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS06660 98f6accc1c79cb3646a87635bd4ddd0a 212 SUPERFAMILY SSF46689 9 76 1.1E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS06660 98f6accc1c79cb3646a87635bd4ddd0a 212 SUPERFAMILY SSF48498 86 190 6.99E-8 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS06660 98f6accc1c79cb3646a87635bd4ddd0a 212 PANTHER PTHR30055 2 197 2.5E-64 T 13-09-2016 PMA3_RS06660 98f6accc1c79cb3646a87635bd4ddd0a 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.5E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS06660 98f6accc1c79cb3646a87635bd4ddd0a 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 5.5E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS06660 98f6accc1c79cb3646a87635bd4ddd0a 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 1.4E-15 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS06660 98f6accc1c79cb3646a87635bd4ddd0a 212 Gene3D G3DSA:1.10.357.10 70 190 6.5E-7 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS14700 db84b86396c6bc330a68bce408e7a0d5 403 Pfam PF07804 HipA-like C-terminal domain 240 375 6.8E-29 T 13-09-2016 IPR012893 HipA-like, C-terminal PMA3_RS14700 db84b86396c6bc330a68bce408e7a0d5 403 Pfam PF13657 HipA N-terminal domain 19 89 1.0E-6 T 13-09-2016 IPR017508 HipA, N-terminal subdomain 1 PMA3_RS14700 db84b86396c6bc330a68bce408e7a0d5 403 PANTHER PTHR37419 1 328 4.4E-17 T 13-09-2016 PMA3_RS14700 db84b86396c6bc330a68bce408e7a0d5 403 PANTHER PTHR37419:SF2 1 328 4.4E-17 T 13-09-2016 PMA3_RS14700 db84b86396c6bc330a68bce408e7a0d5 403 Pfam PF07805 HipA-like N-terminal domain 163 231 1.8E-8 T 13-09-2016 IPR012894 HipA, N-terminal subdomain 2 PMA3_RS12290 ebdc9d256f56df41af175dccbfd97d4d 548 SUPERFAMILY SSF56024 352 503 1.69E-10 T 13-09-2016 PMA3_RS12290 ebdc9d256f56df41af175dccbfd97d4d 548 Gene3D G3DSA:3.30.870.10 350 505 9.7E-12 T 13-09-2016 PMA3_RS12290 ebdc9d256f56df41af175dccbfd97d4d 548 Gene3D G3DSA:3.30.870.10 181 322 5.7E-15 T 13-09-2016 PMA3_RS12290 ebdc9d256f56df41af175dccbfd97d4d 548 Pfam PF13091 PLD-like domain 195 319 3.2E-14 T 13-09-2016 IPR025202 Phospholipase D-like domain PMA3_RS12290 ebdc9d256f56df41af175dccbfd97d4d 548 SUPERFAMILY SSF56024 178 322 7.33E-15 T 13-09-2016 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 SUPERFAMILY SSF53613 230 492 4.05E-72 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 Pfam PF03853 YjeF-related protein N-terminus 34 192 2.9E-36 T 13-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 PANTHER PTHR12592 1 496 2.8E-130 T 13-09-2016 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 230 491 3.4E-66 T 13-09-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 433 443 - T 13-09-2016 IPR017953 Carbohydrate kinase, predicted, conserved site PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 14 213 22.013 T 13-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 Pfam PF01256 Carbohydrate kinase 250 481 4.7E-57 T 13-09-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 PIRSF PIRSF017184 11 496 1.7E-122 T 13-09-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 PANTHER PTHR12592:SF0 1 496 2.8E-130 T 13-09-2016 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 SUPERFAMILY SSF64153 12 249 5.62E-58 T 13-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 227 496 21.43 T 13-09-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 Gene3D G3DSA:3.40.1190.20 239 493 6.4E-86 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 Gene3D G3DSA:3.40.50.10260 12 238 8.2E-62 T 13-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PMA3_RS02035 723df6ec02b0a94644706884867fd4bb 499 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 210 1.7E-41 T 13-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 PANTHER PTHR24031:SF122 210 354 2.1E-59 T 13-09-2016 PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 Pfam PF00271 Helicase conserved C-terminal domain 246 353 4.3E-13 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 SMART SM00490 267 355 1.6E-10 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 Gene3D G3DSA:3.40.50.300 244 354 2.5E-21 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 Pfam PF00270 DEAD/DEAH box helicase 3 172 1.7E-25 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 PANTHER PTHR24031 5 171 2.1E-59 T 13-09-2016 PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 PANTHER PTHR24031:SF122 5 171 2.1E-59 T 13-09-2016 PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 Gene3D G3DSA:3.40.50.300 1 170 5.5E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 PANTHER PTHR24031 210 354 2.1E-59 T 13-09-2016 PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 SMART SM00487 1 206 4.6E-27 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 SUPERFAMILY SSF52540 16 174 9.1E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06595 6950a1a26ddfd22abf0af20ce034cad8 730 SUPERFAMILY SSF52540 222 364 9.1E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 PANTHER PTHR23083 64 184 5.9E-12 T 13-09-2016 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 PANTHER PTHR23083 593 600 5.9E-12 T 13-09-2016 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 SMART SM00028 141 174 42.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 SMART SM00028 99 130 50.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 SMART SM00028 65 98 0.0038 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 Pfam PF13374 Tetratricopeptide repeat 141 169 0.018 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 SUPERFAMILY SSF53756 255 532 6.91E-10 T 13-09-2016 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 Pfam PF13844 Glycosyl transferase family 41 254 406 1.5E-32 T 13-09-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 Pfam PF13844 Glycosyl transferase family 41 412 602 4.8E-42 T 13-09-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 Gene3D G3DSA:1.25.40.10 29 187 1.4E-20 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 Pfam PF13432 Tetratricopeptide repeat 71 122 2.6E-8 T 13-09-2016 PMA3_RS09895 9b0e88fd08beca34cb1d91a49280ed26 613 SUPERFAMILY SSF48452 31 172 7.59E-17 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS02080 6949b701100c5bfe3e249ccd95e65553 395 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 15 324 6.8E-90 T 13-09-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 PMA3_RS02080 6949b701100c5bfe3e249ccd95e65553 395 SUPERFAMILY SSF55681 7 323 4.19E-60 T 13-09-2016 PMA3_RS02080 6949b701100c5bfe3e249ccd95e65553 395 Pfam PF13393 Histidyl-tRNA synthetase 12 321 3.3E-117 T 13-09-2016 PMA3_RS02080 6949b701100c5bfe3e249ccd95e65553 395 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 374 36.244 T 13-09-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 PMA3_RS02080 6949b701100c5bfe3e249ccd95e65553 395 Gene3D G3DSA:3.30.930.10 20 322 3.9E-70 T 13-09-2016 PMA3_RS02080 6949b701100c5bfe3e249ccd95e65553 395 PANTHER PTHR11476 10 361 4.5E-72 T 13-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PMA3_RS02080 6949b701100c5bfe3e249ccd95e65553 395 PIRSF PIRSF001549 7 388 3.1E-47 T 13-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PMA3_RS02080 6949b701100c5bfe3e249ccd95e65553 395 PANTHER PTHR11476:SF5 10 361 4.5E-72 T 13-09-2016 PMA3_RS07215 ea91211feed4d72afe6b114a81291ece 180 SUPERFAMILY SSF53098 2 175 4.97E-31 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS07215 ea91211feed4d72afe6b114a81291ece 180 Gene3D G3DSA:3.30.420.10 3 174 6.2E-52 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS07215 ea91211feed4d72afe6b114a81291ece 180 Pfam PF00929 Exonuclease 5 174 5.2E-20 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS07215 ea91211feed4d72afe6b114a81291ece 180 PANTHER PTHR23044:SF5 3 177 4.1E-62 T 13-09-2016 PMA3_RS07215 ea91211feed4d72afe6b114a81291ece 180 SMART SM00479 3 180 7.3E-11 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS07215 ea91211feed4d72afe6b114a81291ece 180 PANTHER PTHR23044 3 177 4.1E-62 T 13-09-2016 PMA3_RS04700 90b4d159e116af668dbd85c46844e7ae 260 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 10 256 38.969 T 13-09-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 PMA3_RS04700 90b4d159e116af668dbd85c46844e7ae 260 Pfam PF04445 Putative SAM-dependent methyltransferase 27 254 1.3E-90 T 13-09-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 PMA3_RS04700 90b4d159e116af668dbd85c46844e7ae 260 PANTHER PTHR36112 1 260 4.3E-117 T 13-09-2016 PMA3_RS04700 90b4d159e116af668dbd85c46844e7ae 260 Gene3D G3DSA:3.40.50.150 65 257 9.3E-73 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04700 90b4d159e116af668dbd85c46844e7ae 260 SUPERFAMILY SSF53335 15 256 4.76E-71 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04700 90b4d159e116af668dbd85c46844e7ae 260 PANTHER PTHR36112:SF1 1 260 4.3E-117 T 13-09-2016 PMA3_RS01275 d7e096dad7f063969e188f55cf8b8a69 322 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 33 301 8.5E-66 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS01275 d7e096dad7f063969e188f55cf8b8a69 322 Gene3D G3DSA:3.40.190.10 254 312 2.3E-18 T 13-09-2016 PMA3_RS01275 d7e096dad7f063969e188f55cf8b8a69 322 Gene3D G3DSA:3.40.190.10 31 115 2.3E-18 T 13-09-2016 PMA3_RS01275 d7e096dad7f063969e188f55cf8b8a69 322 PANTHER PTHR30177 7 305 4.0E-175 T 13-09-2016 PMA3_RS01275 d7e096dad7f063969e188f55cf8b8a69 322 SUPERFAMILY SSF53850 28 317 4.29E-72 T 13-09-2016 PMA3_RS01275 d7e096dad7f063969e188f55cf8b8a69 322 PANTHER PTHR30177:SF14 7 305 4.0E-175 T 13-09-2016 PMA3_RS01275 d7e096dad7f063969e188f55cf8b8a69 322 Gene3D G3DSA:3.40.190.100 117 253 1.8E-41 T 13-09-2016 PMA3_RS18240 7acb6151daf2be5f544704ed9ea9bcca 361 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 16 171 4.4E-39 T 13-09-2016 IPR017516 AbrB duplication PMA3_RS18240 7acb6151daf2be5f544704ed9ea9bcca 361 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 197 349 3.5E-39 T 13-09-2016 IPR017516 AbrB duplication PMA3_RS18240 7acb6151daf2be5f544704ed9ea9bcca 361 PANTHER PTHR38457:SF1 8 359 1.1E-57 T 13-09-2016 PMA3_RS18240 7acb6151daf2be5f544704ed9ea9bcca 361 PANTHER PTHR38457 8 359 1.1E-57 T 13-09-2016 PMA3_RS18240 7acb6151daf2be5f544704ed9ea9bcca 361 PIRSF PIRSF038991 6 357 3.3E-71 T 13-09-2016 IPR007820 AbrB family GO:0010468|GO:0016021 PMA3_RS18240 7acb6151daf2be5f544704ed9ea9bcca 361 Pfam PF05145 Putative ammonia monooxygenase 41 349 2.8E-89 T 13-09-2016 IPR007820 AbrB family GO:0010468|GO:0016021 PMA3_RS07030 415b27b25b20f6b4de0afbd355ba5202 329 Pfam PF08402 TOBE domain 257 324 1.1E-7 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS07030 415b27b25b20f6b4de0afbd355ba5202 329 PANTHER PTHR24220:SF150 5 281 4.4E-120 T 13-09-2016 PMA3_RS07030 415b27b25b20f6b4de0afbd355ba5202 329 Gene3D G3DSA:3.40.50.300 4 237 4.9E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07030 415b27b25b20f6b4de0afbd355ba5202 329 SUPERFAMILY SSF50331 255 325 3.12E-7 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS07030 415b27b25b20f6b4de0afbd355ba5202 329 SMART SM00382 28 211 2.1E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS07030 415b27b25b20f6b4de0afbd355ba5202 329 PANTHER PTHR24220 5 281 4.4E-120 T 13-09-2016 PMA3_RS07030 415b27b25b20f6b4de0afbd355ba5202 329 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS07030 415b27b25b20f6b4de0afbd355ba5202 329 Pfam PF00005 ABC transporter 20 161 9.2E-36 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS07030 415b27b25b20f6b4de0afbd355ba5202 329 SUPERFAMILY SSF52540 4 240 3.9E-85 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04315 66fc56be61f8604ce80cfc0a1722d981 116 SUPERFAMILY SSF52833 44 115 5.2E-20 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS04315 66fc56be61f8604ce80cfc0a1722d981 116 PANTHER PTHR34386:SF1 41 116 1.1E-20 T 13-09-2016 PMA3_RS04315 66fc56be61f8604ce80cfc0a1722d981 116 Gene3D G3DSA:3.40.30.10 44 115 1.1E-20 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS04315 66fc56be61f8604ce80cfc0a1722d981 116 PANTHER PTHR34386 41 116 1.1E-20 T 13-09-2016 PMA3_RS04315 66fc56be61f8604ce80cfc0a1722d981 116 Pfam PF00462 Glutaredoxin 45 103 1.9E-13 T 13-09-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PMA3_RS09280 c5c977ae1d73c6a0839e72bb2bb409fd 229 Pfam PF04231 Endonuclease I 24 220 1.4E-35 T 13-09-2016 IPR007346 Endonuclease I GO:0004518 PMA3_RS09280 c5c977ae1d73c6a0839e72bb2bb409fd 229 SUPERFAMILY SSF54060 22 222 9.3E-84 T 13-09-2016 PMA3_RS09280 c5c977ae1d73c6a0839e72bb2bb409fd 229 PANTHER PTHR33607 4 225 4.0E-39 T 13-09-2016 PMA3_RS19325 fde2580e230aa55ce8b6014a1d06d3fa 332 PANTHER PTHR33442:SF2 8 332 3.5E-110 T 13-09-2016 PMA3_RS19325 fde2580e230aa55ce8b6014a1d06d3fa 332 Gene3D G3DSA:3.10.310.10 2 152 1.7E-57 T 13-09-2016 PMA3_RS19325 fde2580e230aa55ce8b6014a1d06d3fa 332 SUPERFAMILY SSF54506 2 329 6.06E-105 T 13-09-2016 PMA3_RS19325 fde2580e230aa55ce8b6014a1d06d3fa 332 Gene3D G3DSA:3.10.310.10 153 319 3.5E-60 T 13-09-2016 PMA3_RS19325 fde2580e230aa55ce8b6014a1d06d3fa 332 PIRSF PIRSF029792 1 332 2.6E-122 T 13-09-2016 IPR008794 Proline racemase family PMA3_RS19325 fde2580e230aa55ce8b6014a1d06d3fa 332 PANTHER PTHR33442 8 332 3.5E-110 T 13-09-2016 PMA3_RS19325 fde2580e230aa55ce8b6014a1d06d3fa 332 Pfam PF05544 Proline racemase 7 330 1.2E-125 T 13-09-2016 IPR008794 Proline racemase family PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 SMART SM00388 409 477 2.1E-6 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 SMART SM00387 516 626 8.9E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 PANTHER PTHR24423:SF451 82 139 8.7E-113 T 13-09-2016 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 583 1.1E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 604 1.1E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 623 1.1E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 569 1.1E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 PANTHER PTHR24423 386 627 8.7E-113 T 13-09-2016 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 Gene3D G3DSA:1.10.287.130 408 473 2.9E-4 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 SUPERFAMILY SSF55874 482 625 1.03E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 PANTHER PTHR24423:SF451 386 627 8.7E-113 T 13-09-2016 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 Gene3D G3DSA:3.30.450.20 189 316 1.9E-4 T 13-09-2016 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 Gene3D G3DSA:3.30.450.20 104 188 1.2E-5 T 13-09-2016 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 Pfam PF00512 His Kinase A (phospho-acceptor) domain 411 475 5.3E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 PIRSF PIRSF036431 8 632 4.3E-212 T 13-09-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 SUPERFAMILY SSF103190 81 205 4.32E-14 T 13-09-2016 IPR029151 Periplasmic sensor domain-like PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 517 624 7.2E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 PANTHER PTHR24423 82 139 8.7E-113 T 13-09-2016 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 Pfam PF02743 Cache domain 54 302 9.3E-16 T 13-09-2016 IPR033479 Double Cache domain 1 PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 Gene3D G3DSA:3.30.565.10 482 626 2.3E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23860 2f2fb11070b1011bf0017ad24f95254f 633 SUPERFAMILY SSF47384 394 476 2.55E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12525 4f965891e6d93e5f15222feb8b82ec05 214 SUPERFAMILY SSF46626 126 209 1.63E-15 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12525 4f965891e6d93e5f15222feb8b82ec05 214 Pfam PF00034 Cytochrome c 43 114 3.3E-4 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12525 4f965891e6d93e5f15222feb8b82ec05 214 SUPERFAMILY SSF46626 45 114 2.4E-16 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12525 4f965891e6d93e5f15222feb8b82ec05 214 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 144 207 1.1E-4 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12525 4f965891e6d93e5f15222feb8b82ec05 214 Gene3D G3DSA:1.10.760.10 139 209 8.1E-18 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12525 4f965891e6d93e5f15222feb8b82ec05 214 PANTHER PTHR33751:SF3 25 214 6.3E-35 T 13-09-2016 PMA3_RS12525 4f965891e6d93e5f15222feb8b82ec05 214 PIRSF PIRSF000005 3 212 1.8E-47 T 13-09-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 PMA3_RS12525 4f965891e6d93e5f15222feb8b82ec05 214 Gene3D G3DSA:1.10.760.10 41 138 1.3E-20 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12525 4f965891e6d93e5f15222feb8b82ec05 214 PANTHER PTHR33751 25 214 6.3E-35 T 13-09-2016 PMA3_RS14905 a01014097b7c165aa014c780cd0314f6 692 Gene3D G3DSA:3.20.20.80 609 677 3.8E-152 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14905 a01014097b7c165aa014c780cd0314f6 692 Gene3D G3DSA:3.20.20.80 150 577 3.8E-152 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14905 a01014097b7c165aa014c780cd0314f6 692 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 112 665 1.4E-93 T 13-09-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PMA3_RS14905 a01014097b7c165aa014c780cd0314f6 692 Pfam PF02446 4-alpha-glucanotransferase 157 661 5.0E-109 T 13-09-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PMA3_RS14905 a01014097b7c165aa014c780cd0314f6 692 SUPERFAMILY SSF51445 609 680 3.38E-138 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14905 a01014097b7c165aa014c780cd0314f6 692 SUPERFAMILY SSF51445 132 564 3.38E-138 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14905 a01014097b7c165aa014c780cd0314f6 692 PANTHER PTHR32438:SF5 151 565 9.8E-138 T 13-09-2016 PMA3_RS14905 a01014097b7c165aa014c780cd0314f6 692 PANTHER PTHR32438:SF5 583 692 9.8E-138 T 13-09-2016 PMA3_RS14905 a01014097b7c165aa014c780cd0314f6 692 PANTHER PTHR32438 151 565 9.8E-138 T 13-09-2016 PMA3_RS14905 a01014097b7c165aa014c780cd0314f6 692 PANTHER PTHR32438 583 692 9.8E-138 T 13-09-2016 PMA3_RS03510 a10b3d70080a4ea918a138a81c4d094f 290 PANTHER PTHR30535:SF4 23 285 5.5E-88 T 13-09-2016 PMA3_RS03510 a10b3d70080a4ea918a138a81c4d094f 290 Gene3D G3DSA:3.40.50.1980 132 268 2.5E-22 T 13-09-2016 PMA3_RS03510 a10b3d70080a4ea918a138a81c4d094f 290 Gene3D G3DSA:3.40.50.1980 26 131 6.7E-24 T 13-09-2016 PMA3_RS03510 a10b3d70080a4ea918a138a81c4d094f 290 Pfam PF01497 Periplasmic binding protein 30 262 1.3E-33 T 13-09-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PMA3_RS03510 a10b3d70080a4ea918a138a81c4d094f 290 SUPERFAMILY SSF53807 26 285 1.1E-49 T 13-09-2016 PMA3_RS03510 a10b3d70080a4ea918a138a81c4d094f 290 PANTHER PTHR30535 23 285 5.5E-88 T 13-09-2016 PMA3_RS16195 630ed4282ce61ee5043ef3f6ac1bf3a9 465 TIGRFAM TIGR00886 2A0108: nitrite transporter 34 417 1.8E-111 T 13-09-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 PMA3_RS16195 630ed4282ce61ee5043ef3f6ac1bf3a9 465 Pfam PF07690 Major Facilitator Superfamily 43 383 2.5E-15 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS16195 630ed4282ce61ee5043ef3f6ac1bf3a9 465 Gene3D G3DSA:1.20.1250.20 34 231 3.9E-10 T 13-09-2016 PMA3_RS16195 630ed4282ce61ee5043ef3f6ac1bf3a9 465 Gene3D G3DSA:1.20.1250.20 250 457 3.4E-16 T 13-09-2016 PMA3_RS16195 630ed4282ce61ee5043ef3f6ac1bf3a9 465 PANTHER PTHR23515 4 375 3.4E-208 T 13-09-2016 PMA3_RS16195 630ed4282ce61ee5043ef3f6ac1bf3a9 465 PANTHER PTHR23515:SF6 4 375 3.4E-208 T 13-09-2016 PMA3_RS16195 630ed4282ce61ee5043ef3f6ac1bf3a9 465 PANTHER PTHR23515:SF6 399 459 3.4E-208 T 13-09-2016 PMA3_RS16195 630ed4282ce61ee5043ef3f6ac1bf3a9 465 PANTHER PTHR23515 399 459 3.4E-208 T 13-09-2016 PMA3_RS16195 630ed4282ce61ee5043ef3f6ac1bf3a9 465 SUPERFAMILY SSF103473 34 458 1.02E-37 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS08290 cbd46293c4add186c441618992e95357 168 SUPERFAMILY SSF88946 6 82 6.28E-16 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS08290 cbd46293c4add186c441618992e95357 168 Pfam PF04542 Sigma-70 region 2 10 74 3.8E-12 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS08290 cbd46293c4add186c441618992e95357 168 Pfam PF08281 Sigma-70, region 4 101 151 8.0E-16 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS08290 cbd46293c4add186c441618992e95357 168 Gene3D G3DSA:1.10.1740.10 4 74 2.8E-18 T 13-09-2016 PMA3_RS08290 cbd46293c4add186c441618992e95357 168 SUPERFAMILY SSF88659 94 154 8.07E-17 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS08290 cbd46293c4add186c441618992e95357 168 Gene3D G3DSA:1.10.10.10 97 155 3.7E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08290 cbd46293c4add186c441618992e95357 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 153 6.8E-23 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS08290 cbd46293c4add186c441618992e95357 168 PANTHER PTHR30173 5 167 7.1E-34 T 13-09-2016 PMA3_RS08290 cbd46293c4add186c441618992e95357 168 PANTHER PTHR30173:SF6 5 167 7.1E-34 T 13-09-2016 PMA3_RS13290 0bd500c1ad73a8e1e8f4b9620d2b988c 208 PANTHER PTHR30126:SF15 1 199 9.4E-50 T 13-09-2016 PMA3_RS13290 0bd500c1ad73a8e1e8f4b9620d2b988c 208 SUPERFAMILY SSF53850 1 202 1.74E-36 T 13-09-2016 PMA3_RS13290 0bd500c1ad73a8e1e8f4b9620d2b988c 208 Pfam PF03466 LysR substrate binding domain 1 200 1.7E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS13290 0bd500c1ad73a8e1e8f4b9620d2b988c 208 Gene3D G3DSA:3.40.190.10 84 168 3.0E-15 T 13-09-2016 PMA3_RS13290 0bd500c1ad73a8e1e8f4b9620d2b988c 208 PANTHER PTHR30126 1 199 9.4E-50 T 13-09-2016 PMA3_RS13290 0bd500c1ad73a8e1e8f4b9620d2b988c 208 Gene3D G3DSA:3.40.190.10 1 83 3.9E-18 T 13-09-2016 PMA3_RS07105 8df6eb3a61a9ab9808c52d3dc617b6a1 160 Pfam PF13185 GAF domain 46 152 1.6E-11 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS07105 8df6eb3a61a9ab9808c52d3dc617b6a1 160 SUPERFAMILY SSF55781 19 153 3.27E-40 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS07105 8df6eb3a61a9ab9808c52d3dc617b6a1 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 97 114 - T 13-09-2016 IPR000614 Free Met sulfoxide reductase conserved site PMA3_RS07105 8df6eb3a61a9ab9808c52d3dc617b6a1 160 PANTHER PTHR21021 11 157 2.0E-54 T 13-09-2016 PMA3_RS07105 8df6eb3a61a9ab9808c52d3dc617b6a1 160 Gene3D G3DSA:3.30.450.40 18 152 3.9E-48 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS25475 db6e0c9a9805873ba0864cb60bab3c3a 89 Gene3D G3DSA:1.10.287.10 3 89 4.4E-36 T 13-09-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 PMA3_RS25475 db6e0c9a9805873ba0864cb60bab3c3a 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.573 T 13-09-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 PMA3_RS25475 db6e0c9a9805873ba0864cb60bab3c3a 89 SMART SM01387 8 88 2.1E-48 T 13-09-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS25475 db6e0c9a9805873ba0864cb60bab3c3a 89 Pfam PF00312 Ribosomal protein S15 8 88 5.9E-35 T 13-09-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS25475 db6e0c9a9805873ba0864cb60bab3c3a 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 8.0E-38 T 13-09-2016 PMA3_RS25475 db6e0c9a9805873ba0864cb60bab3c3a 89 PANTHER PTHR23321 1 89 1.4E-42 T 13-09-2016 PMA3_RS25475 db6e0c9a9805873ba0864cb60bab3c3a 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 13-09-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS25475 db6e0c9a9805873ba0864cb60bab3c3a 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.1E-36 T 13-09-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 PMA3_RS25475 db6e0c9a9805873ba0864cb60bab3c3a 89 SUPERFAMILY SSF47060 4 89 5.59E-33 T 13-09-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 PMA3_RS27510 9576db8d75089c58fb4e39861f7be51b 347 Gene3D G3DSA:3.40.190.10 27 141 6.0E-4 T 13-09-2016 PMA3_RS27510 9576db8d75089c58fb4e39861f7be51b 347 PANTHER PTHR30222:SF2 9 347 7.3E-160 T 13-09-2016 PMA3_RS27510 9576db8d75089c58fb4e39861f7be51b 347 Pfam PF13416 Bacterial extracellular solute-binding protein 53 301 4.6E-42 T 13-09-2016 PMA3_RS27510 9576db8d75089c58fb4e39861f7be51b 347 Gene3D G3DSA:3.40.190.10 142 287 1.0E-32 T 13-09-2016 PMA3_RS27510 9576db8d75089c58fb4e39861f7be51b 347 SUPERFAMILY SSF53850 25 344 1.78E-59 T 13-09-2016 PMA3_RS27510 9576db8d75089c58fb4e39861f7be51b 347 PANTHER PTHR30222 9 347 7.3E-160 T 13-09-2016 PMA3_RS00215 b68a10744ac54bdb50e80d544553144a 411 SUPERFAMILY SSF53686 10 396 2.1E-150 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS00215 b68a10744ac54bdb50e80d544553144a 411 PIRSF PIRSF001413 2 404 6.6E-162 T 13-09-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PMA3_RS00215 b68a10744ac54bdb50e80d544553144a 411 Gene3D G3DSA:3.40.50.1100 185 401 3.9E-99 T 13-09-2016 PMA3_RS00215 b68a10744ac54bdb50e80d544553144a 411 PANTHER PTHR10314 14 405 2.1E-241 T 13-09-2016 PMA3_RS00215 b68a10744ac54bdb50e80d544553144a 411 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 398 52.513 T 13-09-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PMA3_RS00215 b68a10744ac54bdb50e80d544553144a 411 PANTHER PTHR10314:SF3 14 405 2.1E-241 T 13-09-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PMA3_RS00215 b68a10744ac54bdb50e80d544553144a 411 Gene3D G3DSA:3.40.50.1100 106 184 4.4E-21 T 13-09-2016 PMA3_RS00215 b68a10744ac54bdb50e80d544553144a 411 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 385 9.5E-47 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS00215 b68a10744ac54bdb50e80d544553144a 411 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 13-09-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PMA3_RS00215 b68a10744ac54bdb50e80d544553144a 411 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 397 1.9E-194 T 13-09-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PMA3_RS06645 74451105e430b274fc1b4fe6940eca24 328 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 200 2.3E-64 T 13-09-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS06645 74451105e430b274fc1b4fe6940eca24 328 PANTHER PTHR11669:SF8 23 203 1.1E-58 T 13-09-2016 PMA3_RS06645 74451105e430b274fc1b4fe6940eca24 328 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 210 321 5.4E-7 T 13-09-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS06645 74451105e430b274fc1b4fe6940eca24 328 PANTHER PTHR11669 23 203 1.1E-58 T 13-09-2016 PMA3_RS06645 74451105e430b274fc1b4fe6940eca24 328 SUPERFAMILY SSF52540 5 202 7.72E-50 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06645 74451105e430b274fc1b4fe6940eca24 328 Gene3D G3DSA:3.40.50.300 5 161 3.6E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06645 74451105e430b274fc1b4fe6940eca24 328 Pfam PF13177 DNA polymerase III, delta subunit 13 159 4.3E-48 T 13-09-2016 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Gene3D G3DSA:3.30.450.40 231 400 1.3E-20 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SMART SM00388 493 561 5.5E-19 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 PANTHER PTHR24423 328 367 5.5E-142 T 13-09-2016 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 PANTHER PTHR24423 1038 1163 5.5E-142 T 13-09-2016 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 PANTHER PTHR24423 472 741 5.5E-142 T 13-09-2016 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 PANTHER PTHR24423 8 26 5.5E-142 T 13-09-2016 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Gene3D G3DSA:1.10.287.130 484 557 1.4E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SUPERFAMILY SSF55874 550 722 7.99E-48 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SUPERFAMILY SSF47384 479 562 1.75E-20 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SUPERFAMILY SSF52172 1037 1159 1.85E-37 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SUPERFAMILY SSF55781 225 388 1.96E-25 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Gene3D G3DSA:3.40.50.2300 893 1016 2.2E-18 T 13-09-2016 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Pfam PF05227 CHASE3 domain 46 179 8.5E-41 T 13-09-2016 IPR007891 CHASE3 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Pfam PF13185 GAF domain 252 388 1.9E-17 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Gene3D G3DSA:3.40.50.2300 770 887 1.9E-24 T 13-09-2016 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 673 3.3E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 PRINTS PR00344 Bacterial sensor protein C-terminal signature 704 717 3.3E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 659 3.3E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 698 3.3E-16 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Pfam PF00072 Response regulator receiver domain 895 997 9.2E-14 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Pfam PF00072 Response regulator receiver domain 773 879 4.2E-16 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Pfam PF00072 Response regulator receiver domain 1041 1153 1.8E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Pfam PF00512 His Kinase A (phospho-acceptor) domain 494 561 1.0E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Gene3D G3DSA:3.30.565.10 568 718 1.3E-46 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Gene3D G3DSA:3.40.50.2300 1038 1159 1.8E-39 T 13-09-2016 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SMART SM00387 608 720 6.2E-38 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SMART SM00448 1039 1153 2.5E-37 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SMART SM00448 771 881 1.0E-18 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SMART SM00448 893 1007 4.7E-12 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 609 718 2.8E-27 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SUPERFAMILY SSF52172 893 1014 6.12E-18 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SMART SM00065 253 397 1.1E-11 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS13415 8f80b996ec68632798f7e608c849726e 1163 SUPERFAMILY SSF52172 771 886 6.97E-27 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS07150 1ed1d9e9a7b88704a54f6e4337b1a904 571 Gene3D G3DSA:3.40.50.720 399 533 4.2E-32 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS07150 1ed1d9e9a7b88704a54f6e4337b1a904 571 Pfam PF02254 TrkA-N domain 405 518 1.7E-21 T 13-09-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PMA3_RS07150 1ed1d9e9a7b88704a54f6e4337b1a904 571 PANTHER PTHR16254 6 559 8.9E-165 T 13-09-2016 PMA3_RS07150 1ed1d9e9a7b88704a54f6e4337b1a904 571 Pfam PF00999 Sodium/hydrogen exchanger family 6 370 2.9E-66 T 13-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PMA3_RS07150 1ed1d9e9a7b88704a54f6e4337b1a904 571 SUPERFAMILY SSF51735 401 543 8.27E-30 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS07150 1ed1d9e9a7b88704a54f6e4337b1a904 571 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 10 281 3.3E-74 T 13-09-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 PMA3_RS07150 1ed1d9e9a7b88704a54f6e4337b1a904 571 PANTHER PTHR16254:SF6 6 559 8.9E-165 T 13-09-2016 PMA3_RS05625 9f3d342257fb5aecc6d876f6f59a2e5d 406 SUPERFAMILY SSF53383 17 399 3.16E-126 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS05625 9f3d342257fb5aecc6d876f6f59a2e5d 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.73 T 13-09-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PMA3_RS05625 9f3d342257fb5aecc6d876f6f59a2e5d 406 Gene3D G3DSA:3.40.640.10 60 290 2.6E-88 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS05625 9f3d342257fb5aecc6d876f6f59a2e5d 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 403 4.7E-216 T 13-09-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 PMA3_RS05625 9f3d342257fb5aecc6d876f6f59a2e5d 406 PANTHER PTHR11986:SF71 12 406 1.2E-213 T 13-09-2016 PMA3_RS05625 9f3d342257fb5aecc6d876f6f59a2e5d 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS05625 9f3d342257fb5aecc6d876f6f59a2e5d 406 Pfam PF00202 Aminotransferase class-III 22 399 1.1E-125 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS05625 9f3d342257fb5aecc6d876f6f59a2e5d 406 Gene3D G3DSA:3.90.1150.10 291 403 1.3E-35 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS05625 9f3d342257fb5aecc6d876f6f59a2e5d 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 399 8.0E-156 T 13-09-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PMA3_RS05625 9f3d342257fb5aecc6d876f6f59a2e5d 406 PANTHER PTHR11986 12 406 1.2E-213 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS10210 59c64b65ad0308dea3e666dfb8491f20 126 Pfam PF12893 Putative lumazine-binding 9 121 1.7E-25 T 13-09-2016 PMA3_RS10210 59c64b65ad0308dea3e666dfb8491f20 126 Gene3D G3DSA:3.10.450.50 1 125 1.8E-41 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS10210 59c64b65ad0308dea3e666dfb8491f20 126 SUPERFAMILY SSF54427 4 124 8.77E-37 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS18270 e1bd7939e450ba7f40f489c66f41db55 619 Pfam PF00664 ABC transporter transmembrane region 39 307 9.6E-19 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS18270 e1bd7939e450ba7f40f489c66f41db55 619 PANTHER PTHR24221:SF203 5 610 0.0 T 13-09-2016 PMA3_RS18270 e1bd7939e450ba7f40f489c66f41db55 619 Gene3D G3DSA:3.40.50.300 360 596 2.7E-84 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18270 e1bd7939e450ba7f40f489c66f41db55 619 SMART SM00382 386 577 1.0E-21 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS18270 e1bd7939e450ba7f40f489c66f41db55 619 Gene3D G3DSA:1.20.1560.10 27 333 4.8E-38 T 13-09-2016 PMA3_RS18270 e1bd7939e450ba7f40f489c66f41db55 619 SUPERFAMILY SSF52540 353 601 1.17E-91 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18270 e1bd7939e450ba7f40f489c66f41db55 619 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS18270 e1bd7939e450ba7f40f489c66f41db55 619 PANTHER PTHR24221 5 610 0.0 T 13-09-2016 PMA3_RS18270 e1bd7939e450ba7f40f489c66f41db55 619 Pfam PF00005 ABC transporter 377 531 1.1E-36 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS18270 e1bd7939e450ba7f40f489c66f41db55 619 SUPERFAMILY SSF90123 20 343 1.31E-49 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS06765 12b9ee3692348bdc41d079643e1ad0a8 267 SUPERFAMILY SSF46785 18 87 4.54E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06765 12b9ee3692348bdc41d079643e1ad0a8 267 Pfam PF09339 IclR helix-turn-helix domain 20 66 3.6E-10 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS06765 12b9ee3692348bdc41d079643e1ad0a8 267 PANTHER PTHR30136 5 264 2.4E-47 T 13-09-2016 PMA3_RS06765 12b9ee3692348bdc41d079643e1ad0a8 267 Gene3D G3DSA:3.30.450.40 83 264 5.0E-51 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS06765 12b9ee3692348bdc41d079643e1ad0a8 267 SMART SM00346 17 104 6.5E-17 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS06765 12b9ee3692348bdc41d079643e1ad0a8 267 SUPERFAMILY SSF55781 80 264 2.42E-38 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS06765 12b9ee3692348bdc41d079643e1ad0a8 267 Pfam PF01614 Bacterial transcriptional regulator 134 259 1.9E-15 T 13-09-2016 IPR014757 Transcription regulator IclR, C-terminal PMA3_RS06765 12b9ee3692348bdc41d079643e1ad0a8 267 Gene3D G3DSA:1.10.10.10 12 82 2.5E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16055 ba54bccd0e41e52c4f2c3a13fab29411 250 PANTHER PTHR11695 6 248 2.4E-90 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS16055 ba54bccd0e41e52c4f2c3a13fab29411 250 SMART SM00829 5 247 0.0017 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS16055 ba54bccd0e41e52c4f2c3a13fab29411 250 SUPERFAMILY SSF51735 32 201 8.91E-37 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS16055 ba54bccd0e41e52c4f2c3a13fab29411 250 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 63 84 - T 13-09-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PMA3_RS16055 ba54bccd0e41e52c4f2c3a13fab29411 250 Pfam PF13602 Zinc-binding dehydrogenase 107 247 4.0E-25 T 13-09-2016 PMA3_RS16055 ba54bccd0e41e52c4f2c3a13fab29411 250 PANTHER PTHR11695:SF558 6 248 2.4E-90 T 13-09-2016 PMA3_RS16055 ba54bccd0e41e52c4f2c3a13fab29411 250 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 1 250 3.9E-128 T 13-09-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 PMA3_RS16055 ba54bccd0e41e52c4f2c3a13fab29411 250 Gene3D G3DSA:3.40.50.720 23 217 1.3E-31 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 PANTHER PTHR32093 17 170 1.3E-45 T 13-09-2016 PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 Pfam PF13332 Haemagluttinin repeat 198 353 0.0073 T 13-09-2016 IPR025157 Haemagluttinin repeat PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 Pfam PF13332 Haemagluttinin repeat 368 438 3.9E-7 T 13-09-2016 IPR025157 Haemagluttinin repeat PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 Pfam PF13332 Haemagluttinin repeat 925 1066 1.2E-10 T 13-09-2016 IPR025157 Haemagluttinin repeat PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 Pfam PF13332 Haemagluttinin repeat 788 868 1.2E-5 T 13-09-2016 IPR025157 Haemagluttinin repeat PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 Pfam PF13332 Haemagluttinin repeat 464 593 7.3E-5 T 13-09-2016 IPR025157 Haemagluttinin repeat PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 Pfam PF13332 Haemagluttinin repeat 600 763 7.4E-18 T 13-09-2016 IPR025157 Haemagluttinin repeat PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 Pfam PF13332 Haemagluttinin repeat 1195 1348 1.5E-19 T 13-09-2016 IPR025157 Haemagluttinin repeat PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 SUPERFAMILY SSF51126 466 489 2.95E-49 T 13-09-2016 IPR011050 Pectin lyase fold/virulence factor PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 SUPERFAMILY SSF51126 45 299 2.95E-49 T 13-09-2016 IPR011050 Pectin lyase fold/virulence factor PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 Gene3D G3DSA:2.160.20.10 40 344 8.4E-71 T 13-09-2016 IPR012334 Pectin lyase fold PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 SMART SM00912 52 172 3.1E-42 T 13-09-2016 IPR008638 Filamentous haemagglutinin, N-terminal PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 70 163 1.8E-14 T 13-09-2016 IPR008638 Filamentous haemagglutinin, N-terminal PMA3_RS20020 c2e8db736e3ccbd97cc359f160b5ef8d 1501 Pfam PF05860 haemagglutination activity domain 49 171 2.6E-28 T 13-09-2016 IPR008638 Filamentous haemagglutinin, N-terminal PMA3_RS22890 6d4843ad0ef2b3ee226745f297dfeaef 251 PANTHER PTHR37323:SF1 1 251 2.9E-82 T 13-09-2016 PMA3_RS22890 6d4843ad0ef2b3ee226745f297dfeaef 251 Pfam PF13444 Acetyltransferase (GNAT) domain 33 133 6.0E-26 T 13-09-2016 PMA3_RS22890 6d4843ad0ef2b3ee226745f297dfeaef 251 PANTHER PTHR37323 1 251 2.9E-82 T 13-09-2016 PMA3_RS22890 6d4843ad0ef2b3ee226745f297dfeaef 251 SUPERFAMILY SSF55729 23 223 1.18E-37 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22890 6d4843ad0ef2b3ee226745f297dfeaef 251 Gene3D G3DSA:3.40.630.30 24 186 7.3E-24 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS23890 4b03f8a93015c1dc54cca05500b8a6e8 165 Pfam PF00583 Acetyltransferase (GNAT) family 59 139 2.5E-15 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS23890 4b03f8a93015c1dc54cca05500b8a6e8 165 PANTHER PTHR23091 1 165 8.0E-17 T 13-09-2016 PMA3_RS23890 4b03f8a93015c1dc54cca05500b8a6e8 165 Gene3D G3DSA:3.40.630.30 3 165 9.0E-29 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS23890 4b03f8a93015c1dc54cca05500b8a6e8 165 SUPERFAMILY SSF55729 3 164 1.06E-25 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22420 1893d5e3c06bf023adf3f25bdefbf6c4 148 SMART SM00091 5 74 1.5E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS22420 1893d5e3c06bf023adf3f25bdefbf6c4 148 Gene3D G3DSA:3.30.450.20 16 121 2.8E-32 T 13-09-2016 PMA3_RS22420 1893d5e3c06bf023adf3f25bdefbf6c4 148 SUPERFAMILY SSF55785 12 121 7.41E-29 T 13-09-2016 IPR000014 PAS domain PMA3_RS22420 1893d5e3c06bf023adf3f25bdefbf6c4 148 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 127 1.1E-20 T 13-09-2016 IPR000014 PAS domain PMA3_RS22420 1893d5e3c06bf023adf3f25bdefbf6c4 148 PANTHER PTHR24351 31 134 1.2E-30 T 13-09-2016 PMA3_RS22420 1893d5e3c06bf023adf3f25bdefbf6c4 148 SMART SM00086 80 122 3.5E-12 T 13-09-2016 IPR001610 PAC motif PMA3_RS22420 1893d5e3c06bf023adf3f25bdefbf6c4 148 Pfam PF13426 PAS domain 16 121 2.4E-22 T 13-09-2016 IPR000014 PAS domain PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 SUPERFAMILY SSF46689 206 252 8.96E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 Pfam PF01965 DJ-1/PfpI family 35 167 1.7E-18 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 SUPERFAMILY SSF46689 258 306 5.82E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 PANTHER PTHR11019:SF58 66 309 9.7E-79 T 13-09-2016 PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 SUPERFAMILY SSF52317 1 188 9.49E-44 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 Gene3D G3DSA:3.40.50.880 4 212 1.8E-49 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 SMART SM00342 222 305 4.3E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 Gene3D G3DSA:1.10.10.60 259 307 9.1E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 PANTHER PTHR11019 66 309 9.7E-79 T 13-09-2016 PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 Gene3D G3DSA:1.10.10.60 213 258 2.8E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12880 48bbffa3fc746641007ebc20bc6a79ef 310 Pfam PF12833 Helix-turn-helix domain 228 305 3.1E-19 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS29595 63ca519475ccd853120991e5063e5844 249 PANTHER PTHR33446 34 249 1.7E-15 T 13-09-2016 PMA3_RS29595 63ca519475ccd853120991e5063e5844 249 PANTHER PTHR33446:SF2 34 249 1.7E-15 T 13-09-2016 PMA3_RS29595 63ca519475ccd853120991e5063e5844 249 Gene3D G3DSA:3.30.1150.10 129 245 2.7E-19 T 13-09-2016 PMA3_RS29595 63ca519475ccd853120991e5063e5844 249 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 166 244 2.8E-17 T 13-09-2016 IPR006260 TonB, C-terminal GO:0006810 PMA3_RS29595 63ca519475ccd853120991e5063e5844 249 SUPERFAMILY SSF74653 158 233 1.83E-15 T 13-09-2016 PMA3_RS29595 63ca519475ccd853120991e5063e5844 249 PRINTS PR01217 Proline rich extensin signature 89 106 4.8E-10 T 13-09-2016 PMA3_RS29595 63ca519475ccd853120991e5063e5844 249 PRINTS PR01217 Proline rich extensin signature 72 88 4.8E-10 T 13-09-2016 PMA3_RS29595 63ca519475ccd853120991e5063e5844 249 PRINTS PR01217 Proline rich extensin signature 107 132 4.8E-10 T 13-09-2016 PMA3_RS29595 63ca519475ccd853120991e5063e5844 249 PRINTS PR01217 Proline rich extensin signature 49 70 4.8E-10 T 13-09-2016 PMA3_RS29595 63ca519475ccd853120991e5063e5844 249 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 165 244 1.5E-13 T 13-09-2016 IPR006260 TonB, C-terminal GO:0006810 PMA3_RS00815 562ddfc3b4c6700d782c8a871334b447 259 SMART SM00052 6 249 4.8E-32 T 13-09-2016 IPR001633 EAL domain PMA3_RS00815 562ddfc3b4c6700d782c8a871334b447 259 PANTHER PTHR33121:SF15 27 252 1.1E-82 T 13-09-2016 PMA3_RS00815 562ddfc3b4c6700d782c8a871334b447 259 Pfam PF00563 EAL domain 27 244 1.3E-48 T 13-09-2016 IPR001633 EAL domain PMA3_RS00815 562ddfc3b4c6700d782c8a871334b447 259 SUPERFAMILY SSF141868 27 245 3.27E-59 T 13-09-2016 IPR001633 EAL domain PMA3_RS00815 562ddfc3b4c6700d782c8a871334b447 259 Gene3D G3DSA:3.20.20.450 27 245 6.7E-52 T 13-09-2016 IPR001633 EAL domain PMA3_RS00815 562ddfc3b4c6700d782c8a871334b447 259 PANTHER PTHR33121 27 252 1.1E-82 T 13-09-2016 PMA3_RS29695 25c28d1ce106089a4fef0ac067fd52e0 277 Gene3D G3DSA:3.40.50.300 25 269 6.6E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29695 25c28d1ce106089a4fef0ac067fd52e0 277 PANTHER PTHR24220:SF585 32 276 1.1E-138 T 13-09-2016 PMA3_RS29695 25c28d1ce106089a4fef0ac067fd52e0 277 SUPERFAMILY SSF52540 26 264 2.78E-58 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29695 25c28d1ce106089a4fef0ac067fd52e0 277 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 31 277 1.1E-124 T 13-09-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 PMA3_RS29695 25c28d1ce106089a4fef0ac067fd52e0 277 Pfam PF00005 ABC transporter 47 201 5.2E-30 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS29695 25c28d1ce106089a4fef0ac067fd52e0 277 SMART SM00382 55 258 2.9E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS29695 25c28d1ce106089a4fef0ac067fd52e0 277 PANTHER PTHR24220 32 276 1.1E-138 T 13-09-2016 PMA3_RS29695 25c28d1ce106089a4fef0ac067fd52e0 277 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS06655 e427725b63db9b994afadb1c474970e8 262 PANTHER PTHR10060:SF20 1 258 6.0E-128 T 13-09-2016 PMA3_RS06655 e427725b63db9b994afadb1c474970e8 262 Gene3D G3DSA:3.20.20.140 1 256 3.2E-84 T 13-09-2016 PMA3_RS06655 e427725b63db9b994afadb1c474970e8 262 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 13-09-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PMA3_RS06655 e427725b63db9b994afadb1c474970e8 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 5.1E-85 T 13-09-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 PMA3_RS06655 e427725b63db9b994afadb1c474970e8 262 PIRSF PIRSF005902 1 259 2.2E-76 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS06655 e427725b63db9b994afadb1c474970e8 262 Pfam PF01026 TatD related DNase 3 254 2.3E-78 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS06655 e427725b63db9b994afadb1c474970e8 262 PANTHER PTHR10060 1 258 6.0E-128 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS06655 e427725b63db9b994afadb1c474970e8 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 13-09-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PMA3_RS06655 e427725b63db9b994afadb1c474970e8 262 SUPERFAMILY SSF51556 2 256 3.18E-86 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS08555 ae14064f3d5f93883f2d600077b82661 357 Pfam PF01728 FtsJ-like methyltransferase 181 272 7.9E-7 T 13-09-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PMA3_RS08555 ae14064f3d5f93883f2d600077b82661 357 PANTHER PTHR37524 1 354 7.1E-164 T 13-09-2016 PMA3_RS08555 ae14064f3d5f93883f2d600077b82661 357 PANTHER PTHR37524:SF2 1 354 7.1E-164 T 13-09-2016 PMA3_RS08555 ae14064f3d5f93883f2d600077b82661 357 SUPERFAMILY SSF53335 180 332 4.9E-14 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS08555 ae14064f3d5f93883f2d600077b82661 357 Gene3D G3DSA:3.40.50.150 179 274 5.9E-15 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS08555 ae14064f3d5f93883f2d600077b82661 357 PIRSF PIRSF028774 1 354 2.5E-161 T 13-09-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 PMA3_RS08555 ae14064f3d5f93883f2d600077b82661 357 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 349 75.77 T 13-09-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 PMA3_RS04465 044af9dad762fe392a08aa670c25fc9a 178 SUPERFAMILY SSF50346 104 177 5.49E-20 T 13-09-2016 IPR011033 PRC-barrel-like PMA3_RS04465 044af9dad762fe392a08aa670c25fc9a 178 PANTHER PTHR33692:SF1 9 178 2.3E-54 T 13-09-2016 PMA3_RS04465 044af9dad762fe392a08aa670c25fc9a 178 Pfam PF01782 RimM N-terminal domain 14 94 4.4E-25 T 13-09-2016 IPR002676 RimM protein GO:0006364 PMA3_RS04465 044af9dad762fe392a08aa670c25fc9a 178 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 178 24.488 T 13-09-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PMA3_RS04465 044af9dad762fe392a08aa670c25fc9a 178 Gene3D G3DSA:2.40.30.60 4 98 3.2E-31 T 13-09-2016 IPR002676 RimM protein GO:0006364 PMA3_RS04465 044af9dad762fe392a08aa670c25fc9a 178 SUPERFAMILY SSF50447 10 98 1.53E-24 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS04465 044af9dad762fe392a08aa670c25fc9a 178 PANTHER PTHR33692 9 178 2.3E-54 T 13-09-2016 PMA3_RS04465 044af9dad762fe392a08aa670c25fc9a 178 Pfam PF05239 PRC-barrel domain 102 172 3.0E-6 T 13-09-2016 IPR027275 PRC-barrel domain PMA3_RS04465 044af9dad762fe392a08aa670c25fc9a 178 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 11 177 7.1E-54 T 13-09-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PMA3_RS04465 044af9dad762fe392a08aa670c25fc9a 178 Gene3D G3DSA:2.30.30.240 104 178 1.3E-29 T 13-09-2016 PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 PANTHER PTHR11451:SF31 1 202 6.9E-47 T 13-09-2016 PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 Gene3D G3DSA:3.30.980.10 66 129 2.3E-16 T 13-09-2016 PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 Gene3D G3DSA:3.30.980.10 167 193 2.3E-16 T 13-09-2016 PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 Gene3D G3DSA:3.40.50.800 201 295 3.7E-22 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 SUPERFAMILY SSF52954 201 295 6.04E-20 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 SUPERFAMILY SSF55186 64 202 1.16E-28 T 13-09-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 Gene3D G3DSA:3.10.20.30 1 63 1.5E-18 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 Pfam PF03129 Anticodon binding domain 208 295 1.5E-16 T 13-09-2016 IPR004154 Anticodon-binding PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 PANTHER PTHR11451 1 202 6.9E-47 T 13-09-2016 PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 SUPERFAMILY SSF81271 2 61 5.23E-13 T 13-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PMA3_RS29910 55a2ba21466b6c87d5c215d218085311 301 Pfam PF02824 TGS domain 2 61 9.5E-7 T 13-09-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PMA3_RS28470 23155bf32db190abe4fee864668db236 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 13-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PMA3_RS28470 23155bf32db190abe4fee864668db236 344 PANTHER PTHR30486 1 344 8.2E-192 T 13-09-2016 PMA3_RS28470 23155bf32db190abe4fee864668db236 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 3.6E-152 T 13-09-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 PMA3_RS28470 23155bf32db190abe4fee864668db236 344 PANTHER PTHR30486:SF6 1 344 8.2E-192 T 13-09-2016 PMA3_RS28470 23155bf32db190abe4fee864668db236 344 Pfam PF00437 Type II/IV secretion system protein 11 270 1.1E-46 T 13-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PMA3_RS28470 23155bf32db190abe4fee864668db236 344 SMART SM00382 122 256 7.3E-4 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS28470 23155bf32db190abe4fee864668db236 344 Gene3D G3DSA:3.40.50.300 100 341 1.2E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28470 23155bf32db190abe4fee864668db236 344 SUPERFAMILY SSF52540 5 335 2.42E-73 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20695 8902e58e07c69b8befcbc46c453e9ace 323 SUPERFAMILY SSF144083 259 320 7.59E-17 T 13-09-2016 PMA3_RS20695 8902e58e07c69b8befcbc46c453e9ace 323 Gene3D G3DSA:1.20.58.340 133 244 5.2E-34 T 13-09-2016 PMA3_RS20695 8902e58e07c69b8befcbc46c453e9ace 323 Pfam PF01544 CorA-like Mg2+ transporter protein 33 319 9.5E-56 T 13-09-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PMA3_RS20695 8902e58e07c69b8befcbc46c453e9ace 323 PANTHER PTHR21535:SF33 33 323 4.1E-48 T 13-09-2016 PMA3_RS20695 8902e58e07c69b8befcbc46c453e9ace 323 PANTHER PTHR21535 33 323 4.1E-48 T 13-09-2016 PMA3_RS20695 8902e58e07c69b8befcbc46c453e9ace 323 Gene3D G3DSA:1.20.58.340 255 323 1.0E-21 T 13-09-2016 PMA3_RS20695 8902e58e07c69b8befcbc46c453e9ace 323 Gene3D G3DSA:3.30.460.20 5 132 5.0E-30 T 13-09-2016 PMA3_RS20695 8902e58e07c69b8befcbc46c453e9ace 323 SUPERFAMILY SSF143865 4 250 4.71E-66 T 13-09-2016 PMA3_RS25170 aa153e2e6a38ae12e2a136fd8dabe6c2 286 SUPERFAMILY SSF56317 1 268 2.09E-77 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS25170 aa153e2e6a38ae12e2a136fd8dabe6c2 286 PANTHER PTHR23088 1 270 3.2E-109 T 13-09-2016 PMA3_RS25170 aa153e2e6a38ae12e2a136fd8dabe6c2 286 Gene3D G3DSA:3.60.110.10 1 270 5.3E-81 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS25170 aa153e2e6a38ae12e2a136fd8dabe6c2 286 Pfam PF00795 Carbon-nitrogen hydrolase 3 258 3.7E-50 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS25170 aa153e2e6a38ae12e2a136fd8dabe6c2 286 PANTHER PTHR23088:SF27 1 270 3.2E-109 T 13-09-2016 PMA3_RS25170 aa153e2e6a38ae12e2a136fd8dabe6c2 286 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 13-09-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site PMA3_RS27200 042763b46cb7ad332bd1a9d66d6df4ed 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.658 T 13-09-2016 IPR023036 Ribosomal protein S14, bacterial/plastid PMA3_RS27200 042763b46cb7ad332bd1a9d66d6df4ed 101 Gene3D G3DSA:4.10.830.10 41 101 2.0E-28 T 13-09-2016 PMA3_RS27200 042763b46cb7ad332bd1a9d66d6df4ed 101 PANTHER PTHR19836 1 101 1.1E-53 T 13-09-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27200 042763b46cb7ad332bd1a9d66d6df4ed 101 SUPERFAMILY SSF57716 2 101 5.7E-36 T 13-09-2016 PMA3_RS27200 042763b46cb7ad332bd1a9d66d6df4ed 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 5.5E-24 T 13-09-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 Pfam PF02560 Cyanate lyase C-terminal domain 87 152 9.7E-32 T 13-09-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 PIRSF PIRSF001263 3 155 8.5E-58 T 13-09-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 SUPERFAMILY SSF55234 87 154 8.37E-28 T 13-09-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 Hamap MF_00535 Cyanate hydratase [cynS]. 1 155 73.354 T 13-09-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 PANTHER PTHR34186 1 155 5.1E-60 T 13-09-2016 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 Gene3D G3DSA:3.30.1160.10 88 154 8.4E-35 T 13-09-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 TIGRFAM TIGR00673 cynS: cyanase 13 155 6.3E-55 T 13-09-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 PRINTS PR01693 Cyanase signature 108 124 4.3E-32 T 13-09-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 PRINTS PR01693 Cyanase signature 140 150 4.3E-32 T 13-09-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 PRINTS PR01693 Cyanase signature 42 59 4.3E-32 T 13-09-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 PRINTS PR01693 Cyanase signature 90 104 4.3E-32 T 13-09-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 PRINTS PR01693 Cyanase signature 22 37 4.3E-32 T 13-09-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 Gene3D G3DSA:1.10.260.40 2 87 5.3E-27 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 SUPERFAMILY SSF47413 3 84 1.9E-18 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 PANTHER PTHR34186:SF2 1 155 5.1E-60 T 13-09-2016 PMA3_RS12915 d2e71891bf3c4c8df9ae03f96f9e84d5 155 SMART SM01116 82 155 9.1E-42 T 13-09-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PMA3_RS10975 9bca02c1344b7392114667195c4fa2c4 319 Gene3D G3DSA:1.10.10.60 267 314 2.6E-5 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10975 9bca02c1344b7392114667195c4fa2c4 319 SUPERFAMILY SSF51215 76 132 3.01E-5 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS10975 9bca02c1344b7392114667195c4fa2c4 319 PANTHER PTHR11019 48 318 3.9E-55 T 13-09-2016 PMA3_RS10975 9bca02c1344b7392114667195c4fa2c4 319 Gene3D G3DSA:1.10.10.60 214 266 2.1E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10975 9bca02c1344b7392114667195c4fa2c4 319 Pfam PF12833 Helix-turn-helix domain 235 317 4.4E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10975 9bca02c1344b7392114667195c4fa2c4 319 SMART SM00342 229 315 2.7E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10975 9bca02c1344b7392114667195c4fa2c4 319 PANTHER PTHR11019:SF54 48 318 3.9E-55 T 13-09-2016 PMA3_RS10975 9bca02c1344b7392114667195c4fa2c4 319 Pfam PF14525 AraC-binding-like domain 29 144 2.9E-21 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS10975 9bca02c1344b7392114667195c4fa2c4 319 SUPERFAMILY SSF46689 215 263 4.66E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS05065 9f066e47977bfd30423f2ef0481ec0cb 157 Pfam PF13673 Acetyltransferase (GNAT) domain 52 133 2.3E-16 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS05065 9f066e47977bfd30423f2ef0481ec0cb 157 PANTHER PTHR23091 7 140 1.1E-23 T 13-09-2016 PMA3_RS05065 9f066e47977bfd30423f2ef0481ec0cb 157 Gene3D G3DSA:3.40.630.30 7 141 1.5E-24 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS05065 9f066e47977bfd30423f2ef0481ec0cb 157 SUPERFAMILY SSF55729 7 143 8.81E-25 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS05065 9f066e47977bfd30423f2ef0481ec0cb 157 PANTHER PTHR23091:SF277 7 140 1.1E-23 T 13-09-2016 PMA3_RS18175 5ca991c781989e7eece4ea59297225ef 270 PANTHER PTHR11019 119 269 1.1E-27 T 13-09-2016 PMA3_RS18175 5ca991c781989e7eece4ea59297225ef 270 SUPERFAMILY SSF46689 220 269 1.61E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18175 5ca991c781989e7eece4ea59297225ef 270 PANTHER PTHR11019:SF105 119 269 1.1E-27 T 13-09-2016 PMA3_RS18175 5ca991c781989e7eece4ea59297225ef 270 Gene3D G3DSA:1.10.10.60 221 269 1.6E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18175 5ca991c781989e7eece4ea59297225ef 270 Pfam PF12833 Helix-turn-helix domain 191 269 2.7E-19 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18175 5ca991c781989e7eece4ea59297225ef 270 Gene3D G3DSA:1.10.10.60 163 220 1.2E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18175 5ca991c781989e7eece4ea59297225ef 270 SMART SM00342 184 267 1.1E-25 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18175 5ca991c781989e7eece4ea59297225ef 270 SUPERFAMILY SSF46689 168 218 1.08E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15885 24f3e535d8971a35c4c61329b0e4dd9c 373 Gene3D G3DSA:1.10.10.60 317 341 6.2E-4 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15885 24f3e535d8971a35c4c61329b0e4dd9c 373 Pfam PF13556 PucR C-terminal helix-turn-helix domain 307 364 4.6E-19 T 13-09-2016 IPR025736 PucR C-terminal helix-turn-helix domain PMA3_RS15885 24f3e535d8971a35c4c61329b0e4dd9c 373 PANTHER PTHR33744 1 371 9.3E-104 T 13-09-2016 PMA3_RS15885 24f3e535d8971a35c4c61329b0e4dd9c 373 Pfam PF05651 Putative sugar diacid recognition 4 134 2.2E-48 T 13-09-2016 IPR008599 Putative sugar diacid recognition PMA3_RS15885 24f3e535d8971a35c4c61329b0e4dd9c 373 PANTHER PTHR33744:SF1 1 371 9.3E-104 T 13-09-2016 PMA3_RS29720 a447eb111ed9e876fe7148ab0e98a91b 134 PANTHER PTHR11049:SF5 3 131 1.4E-61 T 13-09-2016 PMA3_RS29720 a447eb111ed9e876fe7148ab0e98a91b 134 SUPERFAMILY SSF54637 9 132 2.96E-32 T 13-09-2016 IPR029069 HotDog domain PMA3_RS29720 a447eb111ed9e876fe7148ab0e98a91b 134 PANTHER PTHR11049 3 131 1.4E-61 T 13-09-2016 PMA3_RS29720 a447eb111ed9e876fe7148ab0e98a91b 134 Pfam PF03061 Thioesterase superfamily 29 103 4.0E-16 T 13-09-2016 IPR006683 Thioesterase domain PMA3_RS29720 a447eb111ed9e876fe7148ab0e98a91b 134 Gene3D G3DSA:3.10.129.10 7 131 1.3E-33 T 13-09-2016 IPR029069 HotDog domain PMA3_RS23620 bb79c42189ebf8c94c81c0388f8aa80a 450 Pfam PF09375 Imelysin 73 428 7.8E-96 T 13-09-2016 PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 Gene3D G3DSA:3.60.20.10 1 223 1.6E-65 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 SUPERFAMILY SSF56235 1 222 4.12E-57 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 520 2.9E-120 T 13-09-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 SUPERFAMILY SSF52402 442 566 1.97E-68 T 13-09-2016 PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 SUPERFAMILY SSF52402 234 388 1.97E-68 T 13-09-2016 PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 Pfam PF00733 Asparagine synthase 246 585 3.3E-80 T 13-09-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 Pfam PF13537 Glutamine amidotransferase domain 47 166 3.2E-42 T 13-09-2016 IPR017932 Glutamine amidotransferase type 2 domain PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 PANTHER PTHR11772:SF10 433 553 3.9E-194 T 13-09-2016 PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 PANTHER PTHR11772:SF10 2 390 3.9E-194 T 13-09-2016 PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 587 5.4E-294 T 13-09-2016 IPR017535 Asparagine synthase family amidotransferase PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 PIRSF PIRSF001589 1 590 5.7E-203 T 13-09-2016 PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 Gene3D G3DSA:3.40.50.620 224 384 4.0E-77 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 Gene3D G3DSA:3.40.50.620 437 585 4.0E-77 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 PANTHER PTHR11772 433 553 3.9E-194 T 13-09-2016 PMA3_RS06870 60d07f604bea4acd65d8c4e82f4f1f87 590 PANTHER PTHR11772 2 390 3.9E-194 T 13-09-2016 PMA3_RS29240 259f54459871969b28c045bf3159268e 248 SMART SM00850 148 246 4.1E-25 T 13-09-2016 IPR007492 LytTR DNA-binding domain GO:0003677 PMA3_RS29240 259f54459871969b28c045bf3159268e 248 SUPERFAMILY SSF52172 1 123 4.7E-33 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS29240 259f54459871969b28c045bf3159268e 248 Pfam PF04397 LytTr DNA-binding domain 149 245 7.6E-21 T 13-09-2016 IPR007492 LytTR DNA-binding domain GO:0003677 PMA3_RS29240 259f54459871969b28c045bf3159268e 248 PANTHER PTHR26402:SF579 1 121 5.7E-39 T 13-09-2016 PMA3_RS29240 259f54459871969b28c045bf3159268e 248 Gene3D G3DSA:2.40.50.40 141 204 9.2E-11 T 13-09-2016 PMA3_RS29240 259f54459871969b28c045bf3159268e 248 SMART SM00448 1 113 8.0E-31 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS29240 259f54459871969b28c045bf3159268e 248 Gene3D G3DSA:3.40.50.2300 1 120 1.8E-32 T 13-09-2016 PMA3_RS29240 259f54459871969b28c045bf3159268e 248 Pfam PF00072 Response regulator receiver domain 3 113 1.9E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS29240 259f54459871969b28c045bf3159268e 248 PANTHER PTHR26402 1 121 5.7E-39 T 13-09-2016 PMA3_RS21885 91313418d115653b721fe53900a924d1 334 PANTHER PTHR34298 1 334 3.1E-65 T 13-09-2016 PMA3_RS21885 91313418d115653b721fe53900a924d1 334 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 9 176 7.5E-31 T 13-09-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PMA3_RS21885 91313418d115653b721fe53900a924d1 334 Gene3D G3DSA:1.10.10.10 5 85 8.3E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21885 91313418d115653b721fe53900a924d1 334 Pfam PF04079 Segregation and condensation complex subunit ScpB 13 172 3.3E-47 T 13-09-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PMA3_RS21885 91313418d115653b721fe53900a924d1 334 Gene3D G3DSA:1.10.10.10 87 163 2.1E-32 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21885 91313418d115653b721fe53900a924d1 334 SUPERFAMILY SSF46785 7 86 9.25E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21885 91313418d115653b721fe53900a924d1 334 PANTHER PTHR34298:SF2 1 334 3.1E-65 T 13-09-2016 PMA3_RS21885 91313418d115653b721fe53900a924d1 334 SUPERFAMILY SSF46785 87 163 2.0E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 Gene3D G3DSA:3.40.50.720 3 225 1.9E-55 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 SUPERFAMILY SSF51735 3 254 3.74E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PANTHER PTHR24322:SF330 7 136 4.1E-47 T 13-09-2016 PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PANTHER PTHR24322:SF330 152 184 4.1E-47 T 13-09-2016 PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 Pfam PF00106 short chain dehydrogenase 4 193 2.8E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 186 0.0087 T 13-09-2016 PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PANTHER PTHR24322 7 136 4.1E-47 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PANTHER PTHR24322 152 184 4.1E-47 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PIRSF PIRSF000126 1 259 9.5E-68 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.4E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.4E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.4E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 6.3E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.3E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.3E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.3E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS27435 7b120379ac9344513ca081f8ea4041c8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.3E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS05600 7bb582276a4e46588cf0ead88672f991 229 PANTHER PTHR30133:SF3 1 229 1.3E-146 T 13-09-2016 PMA3_RS05600 7bb582276a4e46588cf0ead88672f991 229 SUPERFAMILY SSF161098 8 206 2.09E-38 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS05600 7bb582276a4e46588cf0ead88672f991 229 PANTHER PTHR30133 1 229 1.3E-146 T 13-09-2016 PMA3_RS05600 7bb582276a4e46588cf0ead88672f991 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 2.9E-19 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS05600 7bb582276a4e46588cf0ead88672f991 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 220 3.2E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS05600 7bb582276a4e46588cf0ead88672f991 229 Gene3D G3DSA:1.10.3720.10 8 220 2.8E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14945 3ed3c8be43cc548a77fee1a291eb59f1 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 30 257 4.5E-19 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS14945 3ed3c8be43cc548a77fee1a291eb59f1 266 SUPERFAMILY SSF56219 23 264 5.1E-48 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS14945 3ed3c8be43cc548a77fee1a291eb59f1 266 Gene3D G3DSA:3.60.10.10 21 264 6.9E-16 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS14945 3ed3c8be43cc548a77fee1a291eb59f1 266 PANTHER PTHR15822 23 264 4.4E-88 T 13-09-2016 PMA3_RS14945 3ed3c8be43cc548a77fee1a291eb59f1 266 PANTHER PTHR15822:SF7 23 264 4.4E-88 T 13-09-2016 PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 SUPERFAMILY SSF54001 332 537 1.97E-28 T 13-09-2016 PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 Gene3D G3DSA:3.30.20.10 171 208 1.1E-6 T 13-09-2016 PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 Gene3D G3DSA:3.40.50.1820 726 798 2.1E-4 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 Gene3D G3DSA:3.40.50.1820 626 676 2.1E-4 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 Gene3D G3DSA:3.90.70.10 284 537 2.8E-25 T 13-09-2016 PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 Gene3D G3DSA:1.10.101.10 5 68 1.3E-8 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 Pfam PF00112 Papain family cysteine protease 337 534 2.2E-7 T 13-09-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 SUPERFAMILY SSF53474 619 662 3.64E-7 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 SUPERFAMILY SSF53474 734 808 3.64E-7 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 SUPERFAMILY SSF47090 4 72 2.31E-7 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS18925 4e5436aab896229e8b1fa25fb3af5066 958 SUPERFAMILY SSF53955 83 249 5.62E-18 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 SUPERFAMILY SSF55124 315 421 6.05E-23 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 SUPERFAMILY SSF55124 252 276 6.05E-23 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 Gene3D G3DSA:3.30.413.10 120 273 3.7E-43 T 13-09-2016 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 SUPERFAMILY SSF56014 120 284 2.88E-48 T 13-09-2016 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 273 2.9E-44 T 13-09-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 453 547 3.8E-11 T 13-09-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 SUPERFAMILY SSF55124 1 126 2.94E-28 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 Gene3D G3DSA:3.90.480.10 321 403 4.6E-36 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 Gene3D G3DSA:3.90.480.10 51 117 4.6E-36 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 SUPERFAMILY SSF56014 409 548 1.83E-39 T 13-09-2016 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 Gene3D G3DSA:3.30.413.10 408 548 2.4E-36 T 13-09-2016 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 PANTHER PTHR11493:SF47 327 551 5.0E-165 T 13-09-2016 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 PANTHER PTHR11493:SF47 1 294 5.0E-165 T 13-09-2016 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 PANTHER PTHR11493 327 551 5.0E-165 T 13-09-2016 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 PANTHER PTHR11493 1 294 5.0E-165 T 13-09-2016 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 329 398 5.1E-15 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS12225 9e1d31c2af1dac550dc34c1b312f87a0 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 3.4E-15 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS14260 4eecdbd8b408dc392e8d7bcd41ff92c3 344 PRINTS PR01270 Histone deacetylase superfamily signature 274 284 1.3E-14 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS14260 4eecdbd8b408dc392e8d7bcd41ff92c3 344 PRINTS PR01270 Histone deacetylase superfamily signature 155 178 1.3E-14 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS14260 4eecdbd8b408dc392e8d7bcd41ff92c3 344 PRINTS PR01270 Histone deacetylase superfamily signature 188 203 1.3E-14 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS14260 4eecdbd8b408dc392e8d7bcd41ff92c3 344 PANTHER PTHR10625 99 337 3.3E-83 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS14260 4eecdbd8b408dc392e8d7bcd41ff92c3 344 PANTHER PTHR10625 21 74 3.3E-83 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS14260 4eecdbd8b408dc392e8d7bcd41ff92c3 344 Gene3D G3DSA:3.40.800.20 5 337 1.1E-72 T 13-09-2016 IPR023801 Histone deacetylase domain PMA3_RS14260 4eecdbd8b408dc392e8d7bcd41ff92c3 344 PANTHER PTHR10625:SF121 99 337 3.3E-83 T 13-09-2016 PMA3_RS14260 4eecdbd8b408dc392e8d7bcd41ff92c3 344 PANTHER PTHR10625:SF121 21 74 3.3E-83 T 13-09-2016 PMA3_RS14260 4eecdbd8b408dc392e8d7bcd41ff92c3 344 Pfam PF00850 Histone deacetylase domain 27 336 3.2E-65 T 13-09-2016 IPR023801 Histone deacetylase domain PMA3_RS14260 4eecdbd8b408dc392e8d7bcd41ff92c3 344 SUPERFAMILY SSF52768 3 339 3.26E-84 T 13-09-2016 PMA3_RS21070 c6f9f2f3011bc1dd773d43e76731e865 183 PIRSF PIRSF000303 2 183 1.7E-54 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS21070 c6f9f2f3011bc1dd773d43e76731e865 183 PANTHER PTHR11592:SF31 21 183 5.2E-78 T 13-09-2016 PMA3_RS21070 c6f9f2f3011bc1dd773d43e76731e865 183 Gene3D G3DSA:3.40.30.10 36 180 2.4E-41 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS21070 c6f9f2f3011bc1dd773d43e76731e865 183 PRINTS PR01011 Glutathione peroxidase family signature 47 64 1.3E-8 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS21070 c6f9f2f3011bc1dd773d43e76731e865 183 PRINTS PR01011 Glutathione peroxidase family signature 141 150 1.3E-8 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS21070 c6f9f2f3011bc1dd773d43e76731e865 183 PRINTS PR01011 Glutathione peroxidase family signature 82 98 1.3E-8 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS21070 c6f9f2f3011bc1dd773d43e76731e865 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 49 64 - T 13-09-2016 IPR029759 Glutathione peroxidase active site PMA3_RS21070 c6f9f2f3011bc1dd773d43e76731e865 183 Pfam PF00255 Glutathione peroxidase 41 134 3.2E-21 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS21070 c6f9f2f3011bc1dd773d43e76731e865 183 PANTHER PTHR11592 21 183 5.2E-78 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS21070 c6f9f2f3011bc1dd773d43e76731e865 183 SUPERFAMILY SSF52833 39 180 6.73E-38 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 PANTHER PTHR11609 1 354 1.6E-153 T 13-09-2016 PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 SUPERFAMILY SSF52440 2 94 8.2E-23 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 344 39.052 T 13-09-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 347 1.2E-109 T 13-09-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 Gene3D G3DSA:3.40.50.20 2 97 1.6E-27 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 SUPERFAMILY SSF51246 297 356 1.49E-13 T 13-09-2016 IPR011054 Rudiment single hybrid motif PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 Pfam PF02222 ATP-grasp domain 106 272 1.4E-55 T 13-09-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 Gene3D G3DSA:3.30.470.20 140 358 5.7E-71 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 SUPERFAMILY SSF56059 97 292 2.47E-55 T 13-09-2016 PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 Gene3D G3DSA:3.30.1490.20 98 139 2.9E-6 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS29740 31d6766873b74a1961db2b3a07555133 360 PANTHER PTHR11609:SF8 1 354 1.6E-153 T 13-09-2016 PMA3_RS08245 ea5ac23dd13c6008541a36c71a04740b 348 Gene3D G3DSA:3.40.190.10 275 338 1.4E-19 T 13-09-2016 PMA3_RS08245 ea5ac23dd13c6008541a36c71a04740b 348 Gene3D G3DSA:3.40.190.10 6 127 1.4E-19 T 13-09-2016 PMA3_RS08245 ea5ac23dd13c6008541a36c71a04740b 348 Gene3D G3DSA:3.40.190.10 129 274 9.2E-26 T 13-09-2016 PMA3_RS08245 ea5ac23dd13c6008541a36c71a04740b 348 PANTHER PTHR30006:SF7 1 348 1.0E-56 T 13-09-2016 PMA3_RS08245 ea5ac23dd13c6008541a36c71a04740b 348 PANTHER PTHR30006 1 348 1.0E-56 T 13-09-2016 PMA3_RS08245 ea5ac23dd13c6008541a36c71a04740b 348 Pfam PF13416 Bacterial extracellular solute-binding protein 51 308 1.7E-26 T 13-09-2016 PMA3_RS08245 ea5ac23dd13c6008541a36c71a04740b 348 SUPERFAMILY SSF53850 43 344 4.21E-51 T 13-09-2016 PMA3_RS03005 71f1248a6a4275e2098344d6525fb082 95 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 83 8.5E-31 T 13-09-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 PMA3_RS03005 71f1248a6a4275e2098344d6525fb082 95 Gene3D G3DSA:1.10.260.40 1 88 5.4E-32 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS03005 71f1248a6a4275e2098344d6525fb082 95 PANTHER PTHR36924 1 92 5.3E-19 T 13-09-2016 PMA3_RS03005 71f1248a6a4275e2098344d6525fb082 95 SUPERFAMILY SSF47413 8 91 1.09E-22 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 Pfam PF00512 His Kinase A (phospho-acceptor) domain 168 241 4.9E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 393 5.6E-22 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 SMART SM00387 286 393 9.7E-26 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 SMART SM00388 168 241 8.2E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 SUPERFAMILY SSF47384 152 242 1.2E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 Gene3D G3DSA:3.30.565.10 229 393 3.7E-41 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 PANTHER PTHR24423 1 6 3.3E-58 T 13-09-2016 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 PANTHER PTHR24423 147 393 3.3E-58 T 13-09-2016 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 336 4.5E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 392 4.5E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 350 4.5E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 373 4.5E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 SMART SM00448 7 121 8.1E-25 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 Pfam PF00072 Response regulator receiver domain 10 121 6.4E-21 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 SUPERFAMILY SSF55874 230 393 1.7E-42 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 Gene3D G3DSA:3.40.50.2300 7 145 9.6E-30 T 13-09-2016 PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 SUPERFAMILY SSF52172 8 162 2.99E-31 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS13430 0732c2f46fc3780cf2be498e3fa196ff 393 Gene3D G3DSA:1.10.287.130 161 228 7.9E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS28285 683f9fdbc4f7164c542095317670ab99 271 PANTHER PTHR35936:SF3 7 253 2.0E-43 T 13-09-2016 PMA3_RS28285 683f9fdbc4f7164c542095317670ab99 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 9.5E-23 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS28285 683f9fdbc4f7164c542095317670ab99 271 SMART SM00062 24 246 6.6E-5 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS28285 683f9fdbc4f7164c542095317670ab99 271 PANTHER PTHR35936 7 253 2.0E-43 T 13-09-2016 PMA3_RS28285 683f9fdbc4f7164c542095317670ab99 271 Gene3D G3DSA:3.40.190.10 116 186 9.7E-4 T 13-09-2016 PMA3_RS28285 683f9fdbc4f7164c542095317670ab99 271 Gene3D G3DSA:3.40.190.10 203 244 5.3E-15 T 13-09-2016 PMA3_RS28285 683f9fdbc4f7164c542095317670ab99 271 Gene3D G3DSA:3.40.190.10 23 107 5.3E-15 T 13-09-2016 PMA3_RS28285 683f9fdbc4f7164c542095317670ab99 271 SUPERFAMILY SSF53850 25 243 9.83E-41 T 13-09-2016 PMA3_RS10455 65d9a5dd46c0b9dc3329fec157b2cd44 303 PANTHER PTHR10584 1 301 2.6E-69 T 13-09-2016 PMA3_RS10455 65d9a5dd46c0b9dc3329fec157b2cd44 303 SUPERFAMILY SSF53613 4 296 2.18E-60 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS10455 65d9a5dd46c0b9dc3329fec157b2cd44 303 Gene3D G3DSA:3.40.1190.20 5 298 1.1E-60 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS10455 65d9a5dd46c0b9dc3329fec157b2cd44 303 PANTHER PTHR10584:SF161 1 301 2.6E-69 T 13-09-2016 PMA3_RS10455 65d9a5dd46c0b9dc3329fec157b2cd44 303 Pfam PF00294 pfkB family carbohydrate kinase 7 287 1.6E-39 T 13-09-2016 IPR011611 Carbohydrate kinase PfkB PMA3_RS12490 576f2f756b4500d0d51c64035e7889a6 307 PRINTS PR01438 Universal stress protein signature 261 273 1.4E-5 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS12490 576f2f756b4500d0d51c64035e7889a6 307 PRINTS PR01438 Universal stress protein signature 278 300 1.4E-5 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS12490 576f2f756b4500d0d51c64035e7889a6 307 Gene3D G3DSA:3.40.50.620 18 141 2.4E-13 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS12490 576f2f756b4500d0d51c64035e7889a6 307 Pfam PF00582 Universal stress protein family 174 300 2.2E-21 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS12490 576f2f756b4500d0d51c64035e7889a6 307 Pfam PF00582 Universal stress protein family 18 145 2.8E-9 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS12490 576f2f756b4500d0d51c64035e7889a6 307 SUPERFAMILY SSF52402 170 301 4.55E-25 T 13-09-2016 PMA3_RS12490 576f2f756b4500d0d51c64035e7889a6 307 Gene3D G3DSA:3.40.50.620 142 302 8.6E-28 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS12490 576f2f756b4500d0d51c64035e7889a6 307 PANTHER PTHR31964 138 302 1.1E-15 T 13-09-2016 PMA3_RS12490 576f2f756b4500d0d51c64035e7889a6 307 SUPERFAMILY SSF52402 18 145 9.21E-17 T 13-09-2016 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 PANTHER PTHR11655:SF14 1 176 2.0E-91 T 13-09-2016 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.471 T 13-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 13-09-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 PANTHER PTHR11655 1 176 2.0E-91 T 13-09-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 Gene3D G3DSA:3.90.930.12 2 82 5.1E-29 T 13-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 SUPERFAMILY SSF56053 83 177 6.62E-37 T 13-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 Gene3D G3DSA:3.90.930.12 83 177 7.6E-42 T 13-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 SUPERFAMILY SSF56053 1 82 1.06E-23 T 13-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 PIRSF PIRSF002162 1 177 3.2E-47 T 13-09-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.0E-77 T 13-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.4E-34 T 13-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 5.4E-34 T 13-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.4E-34 T 13-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 Pfam PF00347 Ribosomal protein L6 12 82 1.3E-17 T 13-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS27190 4e7289e39f72d27a26fdecb7c07a004d 177 Pfam PF00347 Ribosomal protein L6 90 164 5.1E-20 T 13-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS13265 19593e18ff371e98c7f747c4c711c0fc 187 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 4 181 7.7E-29 T 13-09-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PMA3_RS13265 19593e18ff371e98c7f747c4c711c0fc 187 Pfam PF04973 Nicotinamide mononucleotide transporter 4 180 9.1E-54 T 13-09-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PMA3_RS13265 19593e18ff371e98c7f747c4c711c0fc 187 PANTHER PTHR36122:SF1 1 182 9.9E-69 T 13-09-2016 PMA3_RS13265 19593e18ff371e98c7f747c4c711c0fc 187 PANTHER PTHR36122 1 182 9.9E-69 T 13-09-2016 PMA3_RS08680 a3cf311253c8d340980231352ee075bb 314 PIRSF PIRSF006268 1 309 1.1E-76 T 13-09-2016 IPR024932 Flavin transferase ApbE GO:0017013 PMA3_RS08680 a3cf311253c8d340980231352ee075bb 314 PANTHER PTHR30040 1 313 2.3E-133 T 13-09-2016 PMA3_RS08680 a3cf311253c8d340980231352ee075bb 314 Pfam PF02424 ApbE family 9 288 5.5E-73 T 13-09-2016 IPR024932 Flavin transferase ApbE GO:0017013 PMA3_RS08680 a3cf311253c8d340980231352ee075bb 314 PANTHER PTHR30040:SF3 1 313 2.3E-133 T 13-09-2016 PMA3_RS08680 a3cf311253c8d340980231352ee075bb 314 SUPERFAMILY SSF143631 3 307 2.3E-89 T 13-09-2016 IPR003374 ApbE-like domain PMA3_RS11675 cddc71a9a0db700e3ca2d1867202922f 462 Gene3D G3DSA:1.20.1250.20 234 449 8.0E-14 T 13-09-2016 PMA3_RS11675 cddc71a9a0db700e3ca2d1867202922f 462 Pfam PF07690 Major Facilitator Superfamily 39 390 3.9E-46 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS11675 cddc71a9a0db700e3ca2d1867202922f 462 Gene3D G3DSA:1.20.1250.20 30 216 5.3E-41 T 13-09-2016 PMA3_RS11675 cddc71a9a0db700e3ca2d1867202922f 462 SUPERFAMILY SSF103473 17 446 1.57E-68 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS11675 cddc71a9a0db700e3ca2d1867202922f 462 ProSitePatterns PS00216 Sugar transport proteins signature 1. 89 105 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS11675 cddc71a9a0db700e3ca2d1867202922f 462 PANTHER PTHR23505 5 440 1.2E-68 T 13-09-2016 PMA3_RS11005 eba66d18d4fd8253c4b29c07c6ac7338 120 ProSitePatterns PS00893 Nudix box signature. 30 51 - T 13-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PMA3_RS11005 eba66d18d4fd8253c4b29c07c6ac7338 120 PRINTS PR00502 NUDIX hydrolase family signature 39 54 7.0E-8 T 13-09-2016 IPR020476 NUDIX hydrolase PMA3_RS11005 eba66d18d4fd8253c4b29c07c6ac7338 120 PRINTS PR00502 NUDIX hydrolase family signature 25 39 7.0E-8 T 13-09-2016 IPR020476 NUDIX hydrolase PMA3_RS11005 eba66d18d4fd8253c4b29c07c6ac7338 120 Pfam PF00293 NUDIX domain 6 105 2.4E-17 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS11005 eba66d18d4fd8253c4b29c07c6ac7338 120 SUPERFAMILY SSF55811 3 120 1.9E-26 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS11005 eba66d18d4fd8253c4b29c07c6ac7338 120 PANTHER PTHR22769 2 113 8.7E-20 T 13-09-2016 PMA3_RS11005 eba66d18d4fd8253c4b29c07c6ac7338 120 Gene3D G3DSA:3.90.79.10 3 118 5.4E-25 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 Gene3D G3DSA:1.10.10.60 211 268 1.9E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 Gene3D G3DSA:2.60.120.280 53 93 6.9E-6 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 PANTHER PTHR11019 53 317 4.6E-49 T 13-09-2016 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 Gene3D G3DSA:1.10.10.60 269 316 1.2E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 PANTHER PTHR11019:SF77 53 317 4.6E-49 T 13-09-2016 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 Pfam PF12833 Helix-turn-helix domain 237 316 8.7E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 268 310 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 SMART SM00342 231 314 4.4E-30 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 SUPERFAMILY SSF46689 267 316 5.82E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 SUPERFAMILY SSF46689 214 264 1.57E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 Pfam PF12852 Cupin 3 198 1.9E-32 T 13-09-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 298 1.4E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS18255 e3e7cd1c0307190da04c9fdb5a99980f 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 314 1.4E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS26705 a3331d298b73ba942d9d86a7d7f19fab 464 PANTHER PTHR39329:SF1 2 462 3.6E-303 T 13-09-2016 PMA3_RS26705 a3331d298b73ba942d9d86a7d7f19fab 464 PIRSF PIRSF018788 2 461 7.5E-239 T 13-09-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 PMA3_RS26705 a3331d298b73ba942d9d86a7d7f19fab 464 Gene3D G3DSA:3.20.20.70 143 450 1.3E-164 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS26705 a3331d298b73ba942d9d86a7d7f19fab 464 PANTHER PTHR39329 2 462 3.6E-303 T 13-09-2016 PMA3_RS26705 a3331d298b73ba942d9d86a7d7f19fab 464 Gene3D G3DSA:2.30.170.30 3 55 2.2E-24 T 13-09-2016 PMA3_RS26705 a3331d298b73ba942d9d86a7d7f19fab 464 Gene3D G3DSA:1.10.220.70 56 142 6.3E-40 T 13-09-2016 PMA3_RS26705 a3331d298b73ba942d9d86a7d7f19fab 464 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 13 442 2.8E-219 T 13-09-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 PMA3_RS25880 a586e9e51af125426ecbb1fd75d1c8f7 508 Pfam PF00171 Aldehyde dehydrogenase family 23 487 1.4E-145 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS25880 a586e9e51af125426ecbb1fd75d1c8f7 508 Gene3D G3DSA:3.40.605.10 13 271 1.1E-100 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS25880 a586e9e51af125426ecbb1fd75d1c8f7 508 PANTHER PTHR11699 11 508 0.0 T 13-09-2016 PMA3_RS25880 a586e9e51af125426ecbb1fd75d1c8f7 508 Gene3D G3DSA:3.40.309.10 272 452 8.3E-68 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS25880 a586e9e51af125426ecbb1fd75d1c8f7 508 PANTHER PTHR11699:SF181 11 508 0.0 T 13-09-2016 PMA3_RS25880 a586e9e51af125426ecbb1fd75d1c8f7 508 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 15 491 5.4E-228 T 13-09-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 PMA3_RS25880 a586e9e51af125426ecbb1fd75d1c8f7 508 SUPERFAMILY SSF53720 9 493 1.14E-151 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS25880 a586e9e51af125426ecbb1fd75d1c8f7 508 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 PANTHER PTHR11019 67 321 2.0E-89 T 13-09-2016 PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 SMART SM00342 230 313 1.4E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 SUPERFAMILY SSF46689 215 261 1.08E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 SUPERFAMILY SSF52317 2 195 7.5E-47 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 PANTHER PTHR11019:SF58 67 321 2.0E-89 T 13-09-2016 PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 Pfam PF01965 DJ-1/PfpI family 3 176 5.6E-19 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 Gene3D G3DSA:1.10.10.60 269 317 6.2E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 SUPERFAMILY SSF46689 266 316 1.21E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 Pfam PF12833 Helix-turn-helix domain 236 315 3.3E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 Gene3D G3DSA:3.40.50.880 4 221 1.4E-52 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 Gene3D G3DSA:1.10.10.60 222 267 2.9E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20225 6766bdaa7037d69944267a83350d3e88 327 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 309 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 SMART SM00448 650 763 4.2E-41 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 SUPERFAMILY SSF52172 649 767 3.42E-42 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 Gene3D G3DSA:1.10.287.130 287 352 6.0E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 356 3.7E-17 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 Gene3D G3DSA:3.30.565.10 357 513 6.9E-43 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 Pfam PF00072 Response regulator receiver domain 652 763 9.9E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 SMART SM00388 291 356 3.2E-22 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 SMART SM00387 402 513 6.8E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 Gene3D G3DSA:3.40.50.2300 647 768 2.2E-46 T 13-09-2016 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 PANTHER PTHR24423 599 617 5.5E-141 T 13-09-2016 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 PANTHER PTHR24423 649 767 5.5E-141 T 13-09-2016 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 PANTHER PTHR24423 263 516 5.5E-141 T 13-09-2016 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 511 8.0E-24 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 SUPERFAMILY SSF55874 345 511 3.67E-45 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 SUPERFAMILY SSF47384 277 357 3.34E-18 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 7.3E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 510 7.3E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 7.3E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS07095 63f781f3809c8619ab29f88261ad695f 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 7.3E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS28910 e0f0ac451f42a7106e598fe8261b1a13 212 Gene3D G3DSA:1.10.357.10 6 168 3.7E-21 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS28910 e0f0ac451f42a7106e598fe8261b1a13 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 9.1E-9 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS28910 e0f0ac451f42a7106e598fe8261b1a13 212 PANTHER PTHR30055:SF92 6 212 1.0E-42 T 13-09-2016 PMA3_RS28910 e0f0ac451f42a7106e598fe8261b1a13 212 SUPERFAMILY SSF46689 10 82 2.31E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28910 e0f0ac451f42a7106e598fe8261b1a13 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.4E-6 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS28910 e0f0ac451f42a7106e598fe8261b1a13 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.4E-6 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS28910 e0f0ac451f42a7106e598fe8261b1a13 212 PANTHER PTHR30055 6 212 1.0E-42 T 13-09-2016 PMA3_RS15540 aa574a7a5cf4eb0608e2c62b4b48adca 355 PANTHER PTHR21310 15 265 3.0E-14 T 13-09-2016 PMA3_RS15540 aa574a7a5cf4eb0608e2c62b4b48adca 355 PANTHER PTHR21310:SF14 15 265 3.0E-14 T 13-09-2016 PMA3_RS15540 aa574a7a5cf4eb0608e2c62b4b48adca 355 SUPERFAMILY SSF56112 17 339 1.02E-57 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS15540 aa574a7a5cf4eb0608e2c62b4b48adca 355 Gene3D G3DSA:3.90.1200.10 134 342 7.0E-37 T 13-09-2016 PMA3_RS15540 aa574a7a5cf4eb0608e2c62b4b48adca 355 Pfam PF01636 Phosphotransferase enzyme family 38 279 6.2E-42 T 13-09-2016 IPR002575 Aminoglycoside phosphotransferase PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 280 7.7E-99 T 13-09-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 4.0E-7 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 61 76 4.0E-7 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 Hamap MF_00367 GTPase Era [era]. 7 297 35.927 T 13-09-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 PANTHER PTHR11649:SF3 7 299 1.0E-117 T 13-09-2016 PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 Gene3D G3DSA:3.40.50.300 10 194 2.6E-43 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 SUPERFAMILY SSF54814 183 297 5.89E-42 T 13-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 Gene3D G3DSA:3.30.300.20 195 294 9.7E-40 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 166 4.0E-29 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 SUPERFAMILY SSF52540 12 205 6.88E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 PANTHER PTHR11649 7 299 1.0E-117 T 13-09-2016 PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 Pfam PF07650 KH domain 210 285 3.4E-21 T 13-09-2016 IPR004044 K Homology domain, type 2 GO:0003723 PMA3_RS04380 e0dae50452d787a016b93dd60e365516 300 Pfam PF01926 50S ribosome-binding GTPase 12 126 6.6E-24 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS27035 effbf7d7d128e71a46796373eceb1ba3 403 Gene3D G3DSA:1.20.1250.20 198 380 3.0E-21 T 13-09-2016 PMA3_RS27035 effbf7d7d128e71a46796373eceb1ba3 403 Pfam PF07690 Major Facilitator Superfamily 9 321 5.5E-44 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS27035 effbf7d7d128e71a46796373eceb1ba3 403 SUPERFAMILY SSF103473 3 381 6.41E-67 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS27035 effbf7d7d128e71a46796373eceb1ba3 403 PANTHER PTHR23501 1 384 3.5E-171 T 13-09-2016 PMA3_RS27035 effbf7d7d128e71a46796373eceb1ba3 403 Gene3D G3DSA:1.20.1250.20 5 181 7.3E-29 T 13-09-2016 PMA3_RS27035 effbf7d7d128e71a46796373eceb1ba3 403 PANTHER PTHR23501:SF4 1 384 3.5E-171 T 13-09-2016 PMA3_RS27035 effbf7d7d128e71a46796373eceb1ba3 403 PRINTS PR01035 Tetracycline resistance protein signature 10 26 1.3E-6 T 13-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PMA3_RS27035 effbf7d7d128e71a46796373eceb1ba3 403 PRINTS PR01035 Tetracycline resistance protein signature 98 119 1.3E-6 T 13-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PMA3_RS27035 effbf7d7d128e71a46796373eceb1ba3 403 PRINTS PR01035 Tetracycline resistance protein signature 158 178 1.3E-6 T 13-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PMA3_RS27035 effbf7d7d128e71a46796373eceb1ba3 403 PRINTS PR01035 Tetracycline resistance protein signature 40 59 1.3E-6 T 13-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PMA3_RS29775 4b5fe791a605998857f39777d394c461 332 SMART SM00342 247 329 1.1E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS29775 4b5fe791a605998857f39777d394c461 332 PANTHER PTHR11019:SF52 159 181 2.1E-34 T 13-09-2016 PMA3_RS29775 4b5fe791a605998857f39777d394c461 332 Gene3D G3DSA:1.10.10.60 281 329 1.0E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS29775 4b5fe791a605998857f39777d394c461 332 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 204 1.1E-47 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS29775 4b5fe791a605998857f39777d394c461 332 PANTHER PTHR11019 159 181 2.1E-34 T 13-09-2016 PMA3_RS29775 4b5fe791a605998857f39777d394c461 332 Pfam PF12833 Helix-turn-helix domain 253 329 1.6E-19 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS29775 4b5fe791a605998857f39777d394c461 332 PANTHER PTHR11019 214 329 2.1E-34 T 13-09-2016 PMA3_RS29775 4b5fe791a605998857f39777d394c461 332 PANTHER PTHR11019:SF52 214 329 2.1E-34 T 13-09-2016 PMA3_RS29775 4b5fe791a605998857f39777d394c461 332 SUPERFAMILY SSF46689 282 330 2.2E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS30135 f76475057b113566794250c827f786da 684 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 683 25.239 T 13-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30135 f76475057b113566794250c827f786da 684 PANTHER PTHR30075 1 684 0.0 T 13-09-2016 PMA3_RS30135 f76475057b113566794250c827f786da 684 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 683 3.8E-240 T 13-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30135 f76475057b113566794250c827f786da 684 SUPERFAMILY SSF109604 334 485 7.07E-20 T 13-09-2016 PMA3_RS30135 f76475057b113566794250c827f786da 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 389 408 1.3E-34 T 13-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30135 f76475057b113566794250c827f786da 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 1.3E-34 T 13-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30135 f76475057b113566794250c827f786da 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.3E-34 T 13-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30135 f76475057b113566794250c827f786da 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 241 256 1.3E-34 T 13-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30135 f76475057b113566794250c827f786da 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.3E-34 T 13-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30135 f76475057b113566794250c827f786da 684 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 539 1.3E-205 T 13-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30135 f76475057b113566794250c827f786da 684 Pfam PF05746 DALR anticodon binding domain 579 671 1.7E-6 T 13-09-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PMA3_RS23765 5b3799ad8cc208c106ca85cce13abfdd 225 PANTHER PTHR30231:SF2 19 222 5.3E-114 T 13-09-2016 PMA3_RS23765 5b3799ad8cc208c106ca85cce13abfdd 225 Pfam PF00929 Exonuclease 33 207 4.2E-34 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS23765 5b3799ad8cc208c106ca85cce13abfdd 225 TIGRFAM TIGR01298 RNaseT: ribonuclease T 23 221 1.1E-112 T 13-09-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 PMA3_RS23765 5b3799ad8cc208c106ca85cce13abfdd 225 SMART SM00479 31 216 4.0E-23 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS23765 5b3799ad8cc208c106ca85cce13abfdd 225 PANTHER PTHR30231 19 222 5.3E-114 T 13-09-2016 PMA3_RS23765 5b3799ad8cc208c106ca85cce13abfdd 225 Gene3D G3DSA:3.30.420.10 23 221 4.0E-58 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS23765 5b3799ad8cc208c106ca85cce13abfdd 225 SUPERFAMILY SSF53098 22 220 2.38E-56 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS23765 5b3799ad8cc208c106ca85cce13abfdd 225 Hamap MF_00157 Ribonuclease T [rnt]. 1 225 108.819 T 13-09-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 PMA3_RS23625 a56090ddbc7240b472beabe7283ee226 475 PANTHER PTHR30600 29 109 3.4E-161 T 13-09-2016 PMA3_RS23625 a56090ddbc7240b472beabe7283ee226 475 Gene3D G3DSA:1.10.760.10 335 475 9.7E-19 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS23625 a56090ddbc7240b472beabe7283ee226 475 SUPERFAMILY SSF46626 334 475 1.39E-24 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS23625 a56090ddbc7240b472beabe7283ee226 475 PANTHER PTHR30600 183 231 3.4E-161 T 13-09-2016 PMA3_RS23625 a56090ddbc7240b472beabe7283ee226 475 PANTHER PTHR30600 256 475 3.4E-161 T 13-09-2016 PMA3_RS23625 a56090ddbc7240b472beabe7283ee226 475 PANTHER PTHR30600:SF4 29 109 3.4E-161 T 13-09-2016 PMA3_RS23625 a56090ddbc7240b472beabe7283ee226 475 PANTHER PTHR30600:SF4 256 475 3.4E-161 T 13-09-2016 PMA3_RS23625 a56090ddbc7240b472beabe7283ee226 475 PANTHER PTHR30600:SF4 183 231 3.4E-161 T 13-09-2016 PMA3_RS23625 a56090ddbc7240b472beabe7283ee226 475 PIRSF PIRSF028099 2 475 6.8E-189 T 13-09-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase PMA3_RS23625 a56090ddbc7240b472beabe7283ee226 475 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 33 475 2.7E-137 T 13-09-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase PMA3_RS16330 0b40a3a5d510e4da6ad17e9e1b9e5201 392 SUPERFAMILY SSF51004 24 389 1.7E-74 T 13-09-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PMA3_RS16330 0b40a3a5d510e4da6ad17e9e1b9e5201 392 Gene3D G3DSA:2.130.10.10 64 128 2.6E-5 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS16330 0b40a3a5d510e4da6ad17e9e1b9e5201 392 Gene3D G3DSA:2.140.10.20 129 383 1.5E-39 T 13-09-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain PMA3_RS16330 0b40a3a5d510e4da6ad17e9e1b9e5201 392 PANTHER PTHR13833 37 238 7.9E-12 T 13-09-2016 PMA3_RS16330 0b40a3a5d510e4da6ad17e9e1b9e5201 392 Pfam PF02239 Cytochrome D1 heme domain 25 386 9.1E-136 T 13-09-2016 PMA3_RS04090 ae3703a85975635c87db26f1f28c8bfa 290 Gene3D G3DSA:3.30.950.10 122 235 2.8E-41 T 13-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PMA3_RS04090 ae3703a85975635c87db26f1f28c8bfa 290 PANTHER PTHR21091:SF18 8 259 4.0E-83 T 13-09-2016 PMA3_RS04090 ae3703a85975635c87db26f1f28c8bfa 290 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 285 1.2E-88 T 13-09-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04090 ae3703a85975635c87db26f1f28c8bfa 290 Gene3D G3DSA:3.40.1010.10 13 121 2.8E-14 T 13-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PMA3_RS04090 ae3703a85975635c87db26f1f28c8bfa 290 PANTHER PTHR21091 8 259 4.0E-83 T 13-09-2016 PMA3_RS04090 ae3703a85975635c87db26f1f28c8bfa 290 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 36.685 T 13-09-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04090 ae3703a85975635c87db26f1f28c8bfa 290 SUPERFAMILY SSF53790 12 232 1.31E-80 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS04090 ae3703a85975635c87db26f1f28c8bfa 290 PIRSF PIRSF005917 5 289 5.0E-103 T 13-09-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04090 ae3703a85975635c87db26f1f28c8bfa 290 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 13-09-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS04090 ae3703a85975635c87db26f1f28c8bfa 290 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 9.9E-30 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS13040 b0dc3c37df11e565b04d0bcb3ba1b583 343 Gene3D G3DSA:3.40.50.1100 118 342 4.8E-64 T 13-09-2016 PMA3_RS13040 b0dc3c37df11e565b04d0bcb3ba1b583 343 PANTHER PTHR10314 5 330 1.9E-70 T 13-09-2016 PMA3_RS13040 b0dc3c37df11e565b04d0bcb3ba1b583 343 PIRSF PIRSF006278 1 343 1.0E-92 T 13-09-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase PMA3_RS13040 b0dc3c37df11e565b04d0bcb3ba1b583 343 PANTHER PTHR10314:SF105 5 330 1.9E-70 T 13-09-2016 PMA3_RS13040 b0dc3c37df11e565b04d0bcb3ba1b583 343 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 329 2.0E-51 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS13040 b0dc3c37df11e565b04d0bcb3ba1b583 343 SUPERFAMILY SSF53686 13 342 1.31E-73 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS29525 453d7ffe40b1a1fb9af09141362dcd02 214 Gene3D G3DSA:3.40.50.2020 7 213 8.2E-79 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS29525 453d7ffe40b1a1fb9af09141362dcd02 214 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 187 1.6E-60 T 13-09-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS29525 453d7ffe40b1a1fb9af09141362dcd02 214 PANTHER PTHR19278:SF36 1 214 2.8E-130 T 13-09-2016 PMA3_RS29525 453d7ffe40b1a1fb9af09141362dcd02 214 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 214 35.154 T 13-09-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS29525 453d7ffe40b1a1fb9af09141362dcd02 214 Pfam PF00156 Phosphoribosyl transferase domain 41 159 1.2E-11 T 13-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PMA3_RS29525 453d7ffe40b1a1fb9af09141362dcd02 214 PANTHER PTHR19278 1 214 2.8E-130 T 13-09-2016 PMA3_RS29525 453d7ffe40b1a1fb9af09141362dcd02 214 SUPERFAMILY SSF53271 1 209 4.97E-48 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS16530 3cf0305df9c548f34115d1708ffa4d68 304 PANTHER PTHR30193:SF5 4 303 9.9E-131 T 13-09-2016 PMA3_RS16530 3cf0305df9c548f34115d1708ffa4d68 304 SUPERFAMILY SSF161098 16 300 4.32E-55 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS16530 3cf0305df9c548f34115d1708ffa4d68 304 Gene3D G3DSA:1.10.3720.10 15 294 4.2E-54 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS16530 3cf0305df9c548f34115d1708ffa4d68 304 PANTHER PTHR30193 4 303 9.9E-131 T 13-09-2016 PMA3_RS16530 3cf0305df9c548f34115d1708ffa4d68 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 290 4.7E-16 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS19805 b579963474be97223431063c65ebdada 610 Gene3D G3DSA:1.10.8.60 485 548 2.7E-12 T 13-09-2016 PMA3_RS19805 b579963474be97223431063c65ebdada 610 SMART SM00382 329 473 3.6E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS19805 b579963474be97223431063c65ebdada 610 Pfam PF02954 Bacterial regulatory protein, Fis family 577 608 1.2E-8 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS19805 b579963474be97223431063c65ebdada 610 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 396 411 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS19805 b579963474be97223431063c65ebdada 610 Gene3D G3DSA:3.40.50.300 314 482 1.8E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19805 b579963474be97223431063c65ebdada 610 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 333 346 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS19805 b579963474be97223431063c65ebdada 610 Gene3D G3DSA:1.10.10.60 549 608 1.6E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS19805 b579963474be97223431063c65ebdada 610 SUPERFAMILY SSF52540 314 550 2.35E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19805 b579963474be97223431063c65ebdada 610 SUPERFAMILY SSF46689 520 608 1.08E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS19805 b579963474be97223431063c65ebdada 610 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 575 592 2.9E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS19805 b579963474be97223431063c65ebdada 610 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 592 610 2.9E-6 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS19805 b579963474be97223431063c65ebdada 610 PANTHER PTHR32071:SF5 313 610 1.5E-124 T 13-09-2016 PMA3_RS19805 b579963474be97223431063c65ebdada 610 Pfam PF00158 Sigma-54 interaction domain 314 476 1.8E-64 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS19805 b579963474be97223431063c65ebdada 610 PANTHER PTHR32071 313 610 1.5E-124 T 13-09-2016 PMA3_RS23505 21ac16c5446083865fe0ef8afbd6c02c 309 SUPERFAMILY SSF46689 202 253 4.93E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23505 21ac16c5446083865fe0ef8afbd6c02c 309 PANTHER PTHR11019 15 309 8.4E-90 T 13-09-2016 PMA3_RS23505 21ac16c5446083865fe0ef8afbd6c02c 309 Gene3D G3DSA:1.10.10.60 257 298 5.5E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23505 21ac16c5446083865fe0ef8afbd6c02c 309 PANTHER PTHR11019:SF81 15 309 8.4E-90 T 13-09-2016 PMA3_RS23505 21ac16c5446083865fe0ef8afbd6c02c 309 SUPERFAMILY SSF46689 255 300 1.39E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23505 21ac16c5446083865fe0ef8afbd6c02c 309 Gene3D G3DSA:1.10.10.60 199 256 7.8E-19 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23505 21ac16c5446083865fe0ef8afbd6c02c 309 Pfam PF12833 Helix-turn-helix domain 225 299 1.9E-18 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS23505 21ac16c5446083865fe0ef8afbd6c02c 309 SMART SM00342 219 302 3.3E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS23505 21ac16c5446083865fe0ef8afbd6c02c 309 Pfam PF06719 AraC-type transcriptional regulator N-terminus 41 190 1.1E-48 T 13-09-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 Gene3D G3DSA:3.40.50.20 1 128 1.1E-45 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 533 550 - T 13-09-2016 IPR001882 Biotin-binding site PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 SUPERFAMILY SSF56059 95 326 3.54E-59 T 13-09-2016 PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 3.5E-78 T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 PANTHER PTHR18866 1 577 6.8E-253 T 13-09-2016 PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 Gene3D G3DSA:3.30.470.20 203 447 2.7E-92 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 Pfam PF00364 Biotin-requiring enzyme 513 575 2.3E-13 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 9.5E-43 T 13-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 SMART SM00878 334 443 1.4E-58 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 Pfam PF02785 Biotin carboxylase C-terminal domain 334 443 1.1E-36 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 SUPERFAMILY SSF51246 328 445 2.56E-38 T 13-09-2016 IPR011054 Rudiment single hybrid motif PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 Gene3D G3DSA:3.30.1490.20 129 201 3.2E-24 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 SUPERFAMILY SSF52440 1 112 3.31E-45 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 SUPERFAMILY SSF51230 506 575 8.38E-16 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS18545 8dbbaac1d307854fd39bf995ea96aa46 579 Gene3D G3DSA:2.40.50.100 507 576 9.3E-18 T 13-09-2016 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 SMART SM00342 224 307 1.3E-32 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 SUPERFAMILY SSF52317 4 189 2.62E-23 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 Gene3D G3DSA:3.40.50.880 82 211 3.6E-18 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 PANTHER PTHR11019:SF25 102 315 8.9E-96 T 13-09-2016 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 SUPERFAMILY SSF46689 260 311 3.49E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 PANTHER PTHR11019 102 315 8.9E-96 T 13-09-2016 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 Gene3D G3DSA:1.10.10.60 212 260 1.4E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 SUPERFAMILY SSF46689 207 258 1.34E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 261 303 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 Pfam PF12833 Helix-turn-helix domain 230 308 2.1E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 Gene3D G3DSA:1.10.10.60 261 311 2.6E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 307 9.5E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS05620 a43bc906c60aec06dc52bc771b60ae2e 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 291 9.5E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 PANTHER PTHR18919 1 393 4.0E-236 T 13-09-2016 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 Gene3D G3DSA:3.40.47.10 194 276 5.5E-77 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 Gene3D G3DSA:3.40.47.10 3 123 5.5E-77 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.6E-147 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 Gene3D G3DSA:3.40.47.10 142 193 2.1E-68 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 Gene3D G3DSA:3.40.47.10 277 392 2.1E-68 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 SUPERFAMILY SSF53901 272 392 2.27E-43 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 PANTHER PTHR18919:SF95 1 393 4.0E-236 T 13-09-2016 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 2.3E-104 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 Pfam PF02803 Thiolase, C-terminal domain 271 392 6.1E-53 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 SUPERFAMILY SSF53901 3 270 2.7E-90 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 PIRSF PIRSF000429 1 393 1.9E-131 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 13-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 13-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PMA3_RS17420 5451d302fab57168e8cdca100e50d4f7 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 13-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 13-09-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 PANTHER PTHR10025 5 290 2.3E-141 T 13-09-2016 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 285 4.1E-67 T 13-09-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 Gene3D G3DSA:3.40.50.720 140 267 1.8E-52 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 SUPERFAMILY SSF51735 123 284 8.59E-52 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 Hamap MF_01576 Bifunctional protein FolD [folD]. 4 286 37.109 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 Gene3D G3DSA:3.40.192.10 8 139 3.5E-44 T 13-09-2016 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 263 271 - T 13-09-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.2E-78 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.2E-78 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.2E-78 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 242 258 1.2E-78 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 259 277 1.2E-78 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.2E-78 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.2E-78 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 SUPERFAMILY SSF53223 4 122 1.73E-36 T 13-09-2016 PMA3_RS11080 e24ad51817b1fd15341bb044ced16ab2 301 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 1.8E-35 T 13-09-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 Gene3D G3DSA:1.20.1080.10 2 228 2.8E-70 T 13-09-2016 IPR023271 Aquaporin-like PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 4 230 33.719 T 13-09-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 Pfam PF00230 Major intrinsic protein 3 223 3.9E-52 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 PANTHER PTHR19139 2 226 1.4E-76 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 10 223 4.4E-60 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 PANTHER PTHR19139:SF103 2 226 1.4E-76 T 13-09-2016 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 4.1E-51 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 PRINTS PR00783 Major intrinsic protein family signature 5 24 4.1E-51 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 PRINTS PR00783 Major intrinsic protein family signature 44 68 4.1E-51 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 PRINTS PR00783 Major intrinsic protein family signature 81 100 4.1E-51 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 4.1E-51 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 4.1E-51 T 13-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 SUPERFAMILY SSF81338 4 227 2.62E-67 T 13-09-2016 IPR023271 Aquaporin-like PMA3_RS22165 e092dc340687deda8d0a4ee94d53f652 231 ProSitePatterns PS00221 MIP family signature. 62 70 - T 13-09-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 Pfam PF00072 Response regulator receiver domain 18 130 2.1E-18 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 PANTHER PTHR10799:SF750 53 330 1.2E-30 T 13-09-2016 PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 330 3.5E-48 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 Pfam PF00990 Diguanylate cyclase, GGDEF domain 169 329 4.7E-48 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 SMART SM00267 154 333 8.2E-57 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 Gene3D G3DSA:3.40.50.2300 14 137 2.9E-28 T 13-09-2016 PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 SMART SM00448 16 130 7.8E-21 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 SUPERFAMILY SSF55073 173 330 4.39E-46 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 PANTHER PTHR10799 53 330 1.2E-30 T 13-09-2016 PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 SUPERFAMILY SSF52172 14 146 2.28E-29 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS04605 b3890bde40830b512ddfb6add2a0c3a9 333 Gene3D G3DSA:3.30.70.270 170 331 2.9E-50 T 13-09-2016 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 Gene3D G3DSA:3.20.20.140 5 256 1.7E-25 T 13-09-2016 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 Gene3D G3DSA:2.40.50.140 992 1090 2.4E-11 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 SUPERFAMILY SSF89550 5 262 2.16E-14 T 13-09-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 PANTHER PTHR32294:SF0 910 1173 0.0 T 13-09-2016 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 PANTHER PTHR32294:SF0 1 894 0.0 T 13-09-2016 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 PANTHER PTHR32294 910 1173 0.0 T 13-09-2016 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 PANTHER PTHR32294 1 894 0.0 T 13-09-2016 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 SMART SM00481 6 73 2.6E-25 T 13-09-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1045 0.0 T 13-09-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 Pfam PF02811 PHP domain 7 171 1.7E-42 T 13-09-2016 IPR004013 PHP domain GO:0003824 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 Gene3D G3DSA:1.10.150.280 836 880 2.9E-7 T 13-09-2016 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 Pfam PF14579 Helix-hairpin-helix motif 812 893 7.5E-24 T 13-09-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 Pfam PF01336 OB-fold nucleic acid binding domain 1009 1083 1.4E-9 T 13-09-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 737 5.5E-175 T 13-09-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS04900 c3ec644cd29ed990c79ffd46625b9330 1173 SUPERFAMILY SSF160975 835 881 3.92E-6 T 13-09-2016 PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 PANTHER PTHR11079:SF10 11 230 3.0E-69 T 13-09-2016 PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 154 368 1.2E-53 T 13-09-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 Gene3D G3DSA:3.40.430.10 137 370 4.3E-69 T 13-09-2016 IPR024072 Dihydrofolate reductase-like domain PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 PIRSF PIRSF006769 6 373 3.3E-126 T 13-09-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 PANTHER PTHR11079 11 230 3.0E-69 T 13-09-2016 PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 SUPERFAMILY SSF53927 11 152 1.62E-48 T 13-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 15 367 1.5E-119 T 13-09-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 SUPERFAMILY SSF53597 153 368 4.51E-53 T 13-09-2016 IPR024072 Dihydrofolate reductase-like domain PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 Gene3D G3DSA:3.40.140.10 11 136 1.7E-36 T 13-09-2016 PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 107 1.5E-20 T 13-09-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 96 - T 13-09-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PMA3_RS26960 4e3b86bbf89bc3f05ac54b2646f4d227 377 Pfam PF01872 RibD C-terminal domain 155 365 1.6E-48 T 13-09-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PMA3_RS14070 6a2c95dbf5d7951a0a40ca6313ab82b5 273 PIRSF PIRSF028756 1 272 5.9E-113 T 13-09-2016 IPR016898 Polyphosphate kinase 2 PMA3_RS14070 6a2c95dbf5d7951a0a40ca6313ab82b5 273 PANTHER PTHR34383:SF1 15 273 4.1E-135 T 13-09-2016 PMA3_RS14070 6a2c95dbf5d7951a0a40ca6313ab82b5 273 Gene3D G3DSA:3.40.50.300 13 256 1.7E-98 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14070 6a2c95dbf5d7951a0a40ca6313ab82b5 273 PANTHER PTHR34383 15 273 4.1E-135 T 13-09-2016 PMA3_RS14070 6a2c95dbf5d7951a0a40ca6313ab82b5 273 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 19 244 2.0E-95 T 13-09-2016 IPR022488 Polyphosphate kinase-2-related PMA3_RS14070 6a2c95dbf5d7951a0a40ca6313ab82b5 273 SUPERFAMILY SSF52540 50 239 1.08E-29 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14070 6a2c95dbf5d7951a0a40ca6313ab82b5 273 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 18 246 4.2E-106 T 13-09-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 PMA3_RS08350 f5d9adcfe9fac6243eba2ca984037ea5 299 Gene3D G3DSA:3.20.20.70 5 291 3.1E-90 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS08350 f5d9adcfe9fac6243eba2ca984037ea5 299 SUPERFAMILY SSF51569 1 290 1.03E-74 T 13-09-2016 PMA3_RS08350 f5d9adcfe9fac6243eba2ca984037ea5 299 Pfam PF00682 HMGL-like 7 277 6.0E-55 T 13-09-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PMA3_RS08350 f5d9adcfe9fac6243eba2ca984037ea5 299 PANTHER PTHR10277:SF40 2 295 1.2E-175 T 13-09-2016 PMA3_RS08350 f5d9adcfe9fac6243eba2ca984037ea5 299 PANTHER PTHR10277 2 295 1.2E-175 T 13-09-2016 PMA3_RS24500 28a90632ee77f862c79127e265d9b0f2 385 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 233 359 2.2E-9 T 13-09-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS24500 28a90632ee77f862c79127e265d9b0f2 385 SUPERFAMILY SSF56645 22 213 4.03E-17 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS24500 28a90632ee77f862c79127e265d9b0f2 385 PANTHER PTHR10909:SF305 47 357 3.7E-12 T 13-09-2016 PMA3_RS24500 28a90632ee77f862c79127e265d9b0f2 385 Gene3D G3DSA:1.20.140.10 205 376 3.0E-21 T 13-09-2016 PMA3_RS24500 28a90632ee77f862c79127e265d9b0f2 385 PANTHER PTHR10909 47 357 3.7E-12 T 13-09-2016 PMA3_RS24500 28a90632ee77f862c79127e265d9b0f2 385 SUPERFAMILY SSF47203 229 378 1.32E-17 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS24500 28a90632ee77f862c79127e265d9b0f2 385 Gene3D G3DSA:2.40.110.10 125 204 1.6E-16 T 13-09-2016 PMA3_RS10625 c52c6d9cd2eb96024eee6f760e87f900 224 Pfam PF00156 Phosphoribosyl transferase domain 14 201 2.0E-23 T 13-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PMA3_RS10625 c52c6d9cd2eb96024eee6f760e87f900 224 SUPERFAMILY SSF53271 9 216 2.23E-48 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS10625 c52c6d9cd2eb96024eee6f760e87f900 224 PANTHER PTHR31299 7 216 4.8E-80 T 13-09-2016 PMA3_RS10625 c52c6d9cd2eb96024eee6f760e87f900 224 Gene3D G3DSA:3.40.50.2020 10 68 2.9E-36 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS10625 c52c6d9cd2eb96024eee6f760e87f900 224 Gene3D G3DSA:3.40.50.2020 104 210 2.9E-36 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS29465 31e48c47da94bcf2d50e8cab209c136a 497 SUPERFAMILY SSF53720 16 496 8.38E-162 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS29465 31e48c47da94bcf2d50e8cab209c136a 497 PANTHER PTHR11699:SF210 1 497 0.0 T 13-09-2016 PMA3_RS29465 31e48c47da94bcf2d50e8cab209c136a 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS29465 31e48c47da94bcf2d50e8cab209c136a 497 Gene3D G3DSA:3.40.309.10 281 468 4.8E-70 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS29465 31e48c47da94bcf2d50e8cab209c136a 497 PANTHER PTHR11699 1 497 0.0 T 13-09-2016 PMA3_RS29465 31e48c47da94bcf2d50e8cab209c136a 497 Pfam PF00171 Aldehyde dehydrogenase family 31 492 5.9E-168 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS29465 31e48c47da94bcf2d50e8cab209c136a 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS29465 31e48c47da94bcf2d50e8cab209c136a 497 Gene3D G3DSA:3.40.605.10 21 280 5.9E-90 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 10 1141 13.379 T 13-09-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 Gene3D G3DSA:1.10.10.160 105 208 1.1E-32 T 13-09-2016 IPR013986 DExx box DNA helicase domain PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 SUPERFAMILY SSF52540 10 368 4.25E-104 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 PANTHER PTHR30591:SF1 4 1149 1.4E-268 T 13-09-2016 PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 11 816 5.8E-278 T 13-09-2016 PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 PANTHER PTHR30591 4 1149 1.4E-268 T 13-09-2016 PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 SUPERFAMILY SSF52540 380 817 2.66E-91 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 PIRSF PIRSF000980 10 1148 0.0 T 13-09-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 11 1094 0.0 T 13-09-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 Gene3D G3DSA:3.40.50.300 674 771 5.3E-5 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 Gene3D G3DSA:3.40.50.300 375 471 5.3E-5 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25900 e79187a82a511da8c09aec2ca798140e 1150 SUPERFAMILY SSF52980 836 1138 7.51E-69 T 13-09-2016 IPR011335 Restriction endonuclease type II-like PMA3_RS18285 e3058c0e7bd033ef8fd880601df89236 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 1.3E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18285 e3058c0e7bd033ef8fd880601df89236 312 Gene3D G3DSA:1.10.10.10 11 93 1.7E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18285 e3058c0e7bd033ef8fd880601df89236 312 Gene3D G3DSA:3.40.190.10 183 272 1.3E-20 T 13-09-2016 PMA3_RS18285 e3058c0e7bd033ef8fd880601df89236 312 SUPERFAMILY SSF53850 97 308 3.39E-39 T 13-09-2016 PMA3_RS18285 e3058c0e7bd033ef8fd880601df89236 312 SUPERFAMILY SSF46785 10 117 1.55E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18285 e3058c0e7bd033ef8fd880601df89236 312 PANTHER PTHR30537 2 307 1.1E-85 T 13-09-2016 PMA3_RS18285 e3058c0e7bd033ef8fd880601df89236 312 Pfam PF03466 LysR substrate binding domain 96 306 3.2E-39 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS18285 e3058c0e7bd033ef8fd880601df89236 312 Gene3D G3DSA:3.40.190.10 99 182 1.6E-20 T 13-09-2016 PMA3_RS17960 e1d1fda74d335f67c4a8968f3c8acfa4 144 SUPERFAMILY SSF51316 6 138 6.59E-37 T 13-09-2016 IPR011057 Mss4-like PMA3_RS17960 e1d1fda74d335f67c4a8968f3c8acfa4 144 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 102 1.1E-11 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS17960 e1d1fda74d335f67c4a8968f3c8acfa4 144 Gene3D G3DSA:3.90.1590.10 2 135 1.2E-31 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS17960 e1d1fda74d335f67c4a8968f3c8acfa4 144 PANTHER PTHR33337 7 144 1.5E-35 T 13-09-2016 PMA3_RS17960 e1d1fda74d335f67c4a8968f3c8acfa4 144 PANTHER PTHR33337:SF4 7 144 1.5E-35 T 13-09-2016 PMA3_RS04145 d3cdb2226fcd84dde6b6beb13b4b21eb 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 354 36.955 T 13-09-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS04145 d3cdb2226fcd84dde6b6beb13b4b21eb 356 PANTHER PTHR21015 4 355 7.1E-121 T 13-09-2016 PMA3_RS04145 d3cdb2226fcd84dde6b6beb13b4b21eb 356 SUPERFAMILY SSF53756 4 354 1.7E-115 T 13-09-2016 PMA3_RS04145 d3cdb2226fcd84dde6b6beb13b4b21eb 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 182 342 1.1E-34 T 13-09-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS04145 d3cdb2226fcd84dde6b6beb13b4b21eb 356 Gene3D G3DSA:3.40.50.2000 3 192 4.7E-68 T 13-09-2016 PMA3_RS04145 d3cdb2226fcd84dde6b6beb13b4b21eb 356 Gene3D G3DSA:3.40.50.2000 252 335 3.1E-5 T 13-09-2016 PMA3_RS04145 d3cdb2226fcd84dde6b6beb13b4b21eb 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 141 3.6E-42 T 13-09-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS04145 d3cdb2226fcd84dde6b6beb13b4b21eb 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 349 9.0E-105 T 13-09-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS04145 d3cdb2226fcd84dde6b6beb13b4b21eb 356 PANTHER PTHR21015:SF22 4 355 7.1E-121 T 13-09-2016 PMA3_RS16850 5acf70ef285a5cceb25ab9aeb6f1635a 209 Pfam PF00857 Isochorismatase family 11 193 9.6E-34 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS16850 5acf70ef285a5cceb25ab9aeb6f1635a 209 SUPERFAMILY SSF52499 8 205 6.67E-46 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS16850 5acf70ef285a5cceb25ab9aeb6f1635a 209 PANTHER PTHR11080 10 209 6.0E-36 T 13-09-2016 PMA3_RS16850 5acf70ef285a5cceb25ab9aeb6f1635a 209 Gene3D G3DSA:3.40.50.850 8 207 1.8E-47 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS01665 274d28457ec7dff04bb74dfe4a2ea424 84 Gene3D G3DSA:1.10.1200.10 3 81 1.3E-16 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS01665 274d28457ec7dff04bb74dfe4a2ea424 84 Pfam PF00550 Phosphopantetheine attachment site 11 76 4.6E-12 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS01665 274d28457ec7dff04bb74dfe4a2ea424 84 SUPERFAMILY SSF47336 3 81 3.4E-17 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS10200 bc650e2171fbca9434ad1f57d71b58b7 141 PANTHER PTHR39434:SF1 1 141 3.3E-48 T 13-09-2016 PMA3_RS10200 bc650e2171fbca9434ad1f57d71b58b7 141 Gene3D G3DSA:3.10.180.10 6 137 2.4E-26 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS10200 bc650e2171fbca9434ad1f57d71b58b7 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 129 2.5E-6 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS10200 bc650e2171fbca9434ad1f57d71b58b7 141 PANTHER PTHR39434 1 141 3.3E-48 T 13-09-2016 PMA3_RS10200 bc650e2171fbca9434ad1f57d71b58b7 141 SUPERFAMILY SSF54593 6 131 3.95E-24 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS00985 79dbc76f2a483f164a3751eb62210152 413 Gene3D G3DSA:3.40.140.10 6 131 3.8E-18 T 13-09-2016 PMA3_RS00985 79dbc76f2a483f164a3751eb62210152 413 SUPERFAMILY SSF53927 17 128 5.47E-15 T 13-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 PMA3_RS00985 79dbc76f2a483f164a3751eb62210152 413 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 69 109 - T 13-09-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PMA3_RS27745 aca6d1d131f0b6320964353c0d9d82c2 427 Pfam PF00202 Aminotransferase class-III 43 410 4.9E-87 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS27745 aca6d1d131f0b6320964353c0d9d82c2 427 PANTHER PTHR11986:SF88 44 419 2.5E-192 T 13-09-2016 PMA3_RS27745 aca6d1d131f0b6320964353c0d9d82c2 427 PANTHER PTHR11986 44 419 2.5E-192 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS27745 aca6d1d131f0b6320964353c0d9d82c2 427 Gene3D G3DSA:3.90.1150.10 322 412 4.9E-33 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS27745 aca6d1d131f0b6320964353c0d9d82c2 427 Gene3D G3DSA:3.90.1150.10 30 77 4.9E-33 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS27745 aca6d1d131f0b6320964353c0d9d82c2 427 Gene3D G3DSA:3.40.640.10 79 319 1.1E-67 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS27745 aca6d1d131f0b6320964353c0d9d82c2 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS27745 aca6d1d131f0b6320964353c0d9d82c2 427 SUPERFAMILY SSF53383 36 412 3.94E-102 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS28315 28754cd182b0e4d680df557c4d972a5f 239 PIRSF PIRSF015601 3 238 8.1E-61 T 13-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS28315 28754cd182b0e4d680df557c4d972a5f 239 Gene3D G3DSA:3.40.1280.10 74 238 3.4E-62 T 13-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PMA3_RS28315 28754cd182b0e4d680df557c4d972a5f 239 PANTHER PTHR30027:SF3 1 239 9.2E-92 T 13-09-2016 PMA3_RS28315 28754cd182b0e4d680df557c4d972a5f 239 SUPERFAMILY SSF88697 3 67 1.91E-16 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS28315 28754cd182b0e4d680df557c4d972a5f 239 Gene3D G3DSA:2.40.240.20 1 67 8.9E-26 T 13-09-2016 PMA3_RS28315 28754cd182b0e4d680df557c4d972a5f 239 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 18 237 3.1E-66 T 13-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS28315 28754cd182b0e4d680df557c4d972a5f 239 PANTHER PTHR30027 1 239 9.2E-92 T 13-09-2016 PMA3_RS28315 28754cd182b0e4d680df557c4d972a5f 239 Pfam PF04452 RNA methyltransferase 19 233 1.0E-73 T 13-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS28315 28754cd182b0e4d680df557c4d972a5f 239 SUPERFAMILY SSF75217 74 239 6.98E-53 T 13-09-2016 IPR029028 Alpha/beta knot methyltransferases PMA3_RS29560 8f0f06532c4ff988f40a7c27d370d7df 87 SUPERFAMILY SSF63562 1 81 2.27E-25 T 13-09-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS29560 8f0f06532c4ff988f40a7c27d370d7df 87 SMART SM01409 8 61 3.4E-16 T 13-09-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS29560 8f0f06532c4ff988f40a7c27d370d7df 87 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.776 T 13-09-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS29560 8f0f06532c4ff988f40a7c27d370d7df 87 Pfam PF01192 RNA polymerase Rpb6 8 59 1.4E-16 T 13-09-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS29560 8f0f06532c4ff988f40a7c27d370d7df 87 Gene3D G3DSA:3.90.940.10 1 68 4.8E-17 T 13-09-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS29560 8f0f06532c4ff988f40a7c27d370d7df 87 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.6E-24 T 13-09-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PMA3_RS29560 8f0f06532c4ff988f40a7c27d370d7df 87 PANTHER PTHR34476 2 82 4.0E-26 T 13-09-2016 PMA3_RS11575 fa5112fb2d92be9fb3a088109741a374 523 PANTHER PTHR11895:SF35 48 521 9.5E-129 T 13-09-2016 PMA3_RS11575 fa5112fb2d92be9fb3a088109741a374 523 SUPERFAMILY SSF75304 44 512 4.45E-111 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS11575 fa5112fb2d92be9fb3a088109741a374 523 ProSitePatterns PS00571 Amidases signature. 199 230 - T 13-09-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS11575 fa5112fb2d92be9fb3a088109741a374 523 Gene3D G3DSA:3.90.1300.10 48 519 8.2E-109 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS11575 fa5112fb2d92be9fb3a088109741a374 523 Pfam PF01425 Amidase 71 504 4.5E-89 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS11575 fa5112fb2d92be9fb3a088109741a374 523 PANTHER PTHR11895 48 521 9.5E-129 T 13-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS11295 d136e905edafb3be2a26d6fea0a9eb27 1291 PANTHER PTHR36153 655 1268 7.3E-118 T 13-09-2016 PMA3_RS11295 d136e905edafb3be2a26d6fea0a9eb27 1291 PANTHER PTHR36153 1 553 7.3E-118 T 13-09-2016 PMA3_RS11295 d136e905edafb3be2a26d6fea0a9eb27 1291 SUPERFAMILY SSF52540 120 267 3.44E-9 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11295 d136e905edafb3be2a26d6fea0a9eb27 1291 Pfam PF14331 ImcF-related N-terminal domain 183 428 2.1E-54 T 13-09-2016 IPR025743 ImcF-related, N-terminal domain PMA3_RS11295 d136e905edafb3be2a26d6fea0a9eb27 1291 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1039 1234 2.5E-36 T 13-09-2016 IPR010623 Type VI secretion system IcmF, C-terminal PMA3_RS11295 d136e905edafb3be2a26d6fea0a9eb27 1291 Gene3D G3DSA:3.40.50.300 125 259 6.6E-4 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11295 d136e905edafb3be2a26d6fea0a9eb27 1291 Pfam PF06761 Intracellular multiplication and human macrophage-killing 491 899 2.4E-50 T 13-09-2016 IPR009612 ImcF-related PMA3_RS11295 d136e905edafb3be2a26d6fea0a9eb27 1291 PANTHER PTHR36153:SF1 655 1268 7.3E-118 T 13-09-2016 PMA3_RS11295 d136e905edafb3be2a26d6fea0a9eb27 1291 PANTHER PTHR36153:SF1 1 553 7.3E-118 T 13-09-2016 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 PIRSF PIRSF002936 1 299 1.7E-153 T 13-09-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 26 254 4.2E-66 T 13-09-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 6 299 2.0E-157 T 13-09-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 Gene3D G3DSA:3.40.50.620 3 207 3.5E-62 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 Gene3D G3DSA:3.40.50.620 241 250 3.5E-62 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 PANTHER PTHR23293 242 299 7.2E-91 T 13-09-2016 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 PANTHER PTHR23293:SF6 242 299 7.2E-91 T 13-09-2016 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 PANTHER PTHR23293 3 155 7.2E-91 T 13-09-2016 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 1 299 56.432 T 13-09-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 PANTHER PTHR23293:SF6 175 208 7.2E-91 T 13-09-2016 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 SUPERFAMILY SSF52402 3 207 3.89E-75 T 13-09-2016 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 PANTHER PTHR23293:SF6 3 155 7.2E-91 T 13-09-2016 PMA3_RS11925 fc0fba82c9f280df0284b314dc54257a 299 PANTHER PTHR23293 175 208 7.2E-91 T 13-09-2016 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 Gene3D G3DSA:1.10.10.10 120 208 3.0E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 PANTHER PTHR26402:SF151 2 205 1.7E-53 T 13-09-2016 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 SUPERFAMILY SSF52172 2 129 5.41E-31 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 SMART SM00448 2 114 6.6E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 Pfam PF00072 Response regulator receiver domain 4 115 6.4E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 PANTHER PTHR26402 2 205 1.7E-53 T 13-09-2016 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 3.2E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 3.2E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 3.2E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 SUPERFAMILY SSF46894 141 207 2.07E-16 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 202 4.1E-20 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 Gene3D G3DSA:3.40.50.2300 3 119 1.9E-31 T 13-09-2016 PMA3_RS07115 315696349daa2b63ef209a999ccc1192 208 SMART SM00421 145 202 2.1E-15 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS07085 56da465666b291eb2b62b9f8d92055be 161 PANTHER PTHR11592 12 161 1.6E-80 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS07085 56da465666b291eb2b62b9f8d92055be 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 13-09-2016 IPR029760 Glutathione peroxidase conserved site PMA3_RS07085 56da465666b291eb2b62b9f8d92055be 161 SUPERFAMILY SSF52833 6 161 6.16E-61 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07085 56da465666b291eb2b62b9f8d92055be 161 PRINTS PR01011 Glutathione peroxidase family signature 58 74 9.0E-21 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS07085 56da465666b291eb2b62b9f8d92055be 161 PRINTS PR01011 Glutathione peroxidase family signature 23 40 9.0E-21 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS07085 56da465666b291eb2b62b9f8d92055be 161 PRINTS PR01011 Glutathione peroxidase family signature 124 133 9.0E-21 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS07085 56da465666b291eb2b62b9f8d92055be 161 PIRSF PIRSF000303 1 161 9.2E-66 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS07085 56da465666b291eb2b62b9f8d92055be 161 Pfam PF00255 Glutathione peroxidase 9 112 2.2E-40 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS07085 56da465666b291eb2b62b9f8d92055be 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 13-09-2016 IPR029759 Glutathione peroxidase active site PMA3_RS07085 56da465666b291eb2b62b9f8d92055be 161 Gene3D G3DSA:3.40.30.10 6 161 6.7E-69 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06285 c844b8bac77bbe0dd78a4a6293289aca 154 Gene3D G3DSA:1.10.260.40 2 62 6.2E-10 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS06285 c844b8bac77bbe0dd78a4a6293289aca 154 SUPERFAMILY SSF46689 107 149 5.91E-5 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS06285 c844b8bac77bbe0dd78a4a6293289aca 154 SMART SM00530 10 62 7.3E-4 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS06285 c844b8bac77bbe0dd78a4a6293289aca 154 Pfam PF13384 Homeodomain-like domain 123 150 4.5E-7 T 13-09-2016 PMA3_RS06285 c844b8bac77bbe0dd78a4a6293289aca 154 Pfam PF01381 Helix-turn-helix 11 60 1.3E-6 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS06285 c844b8bac77bbe0dd78a4a6293289aca 154 SUPERFAMILY SSF47413 4 64 1.55E-8 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS06285 c844b8bac77bbe0dd78a4a6293289aca 154 Gene3D G3DSA:1.10.10.10 127 152 6.1E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11560 813969f25c2c9be4b9102b02c5e707f7 445 SUPERFAMILY SSF103473 9 429 2.75E-61 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS11560 813969f25c2c9be4b9102b02c5e707f7 445 Pfam PF07690 Major Facilitator Superfamily 26 381 4.5E-42 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS11560 813969f25c2c9be4b9102b02c5e707f7 445 PANTHER PTHR23505 8 427 4.1E-60 T 13-09-2016 PMA3_RS11560 813969f25c2c9be4b9102b02c5e707f7 445 Gene3D G3DSA:1.20.1250.20 21 201 1.7E-32 T 13-09-2016 PMA3_RS11560 813969f25c2c9be4b9102b02c5e707f7 445 Gene3D G3DSA:1.20.1250.20 222 431 2.9E-16 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 SUPERFAMILY SSF82866 837 1029 1.7E-46 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 Gene3D G3DSA:3.30.70.1430 569 675 5.8E-33 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 Gene3D G3DSA:3.30.70.1430 38 139 4.2E-34 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1031 0.0 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.7E-101 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 1.7E-101 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.7E-101 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.7E-101 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.7E-101 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.7E-101 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.7E-101 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.7E-101 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 SUPERFAMILY SSF82693 38 130 2.62E-27 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 PANTHER PTHR32063:SF13 1 1044 0.0 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 Gene3D G3DSA:1.20.1640.10 291 505 1.5E-57 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 SUPERFAMILY SSF82714 728 814 5.62E-23 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 SUPERFAMILY SSF82866 296 497 1.44E-47 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 SUPERFAMILY SSF82714 182 271 1.57E-19 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 SUPERFAMILY SSF82693 567 675 3.35E-27 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 Gene3D G3DSA:3.30.2090.10 727 814 1.5E-27 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 Gene3D G3DSA:1.10.3850.10 820 1031 4.7E-57 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 SUPERFAMILY SSF82693 678 727 9.42E-27 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 SUPERFAMILY SSF82693 814 862 9.42E-27 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 Gene3D G3DSA:3.30.2090.10 181 275 1.8E-23 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1048 0.0 T 13-09-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 SUPERFAMILY SSF82693 135 182 4.5E-24 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 SUPERFAMILY SSF82693 274 330 4.5E-24 T 13-09-2016 PMA3_RS05450 27da67b036220326be186abbbb400ef9 1053 PANTHER PTHR32063 1 1044 0.0 T 13-09-2016 PMA3_RS11190 aaf736a89fd687e9f2a12890a866b9af 347 Pfam PF00296 Luciferase-like monooxygenase 1 317 9.5E-56 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS11190 aaf736a89fd687e9f2a12890a866b9af 347 Gene3D G3DSA:3.20.20.30 1 347 2.7E-84 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS11190 aaf736a89fd687e9f2a12890a866b9af 347 PANTHER PTHR30137 1 347 1.4E-45 T 13-09-2016 PMA3_RS11190 aaf736a89fd687e9f2a12890a866b9af 347 SUPERFAMILY SSF51679 1 347 3.06E-77 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PANTHER PTHR30222 14 361 4.9E-119 T 13-09-2016 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 Gene3D G3DSA:3.40.190.10 39 140 4.6E-8 T 13-09-2016 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 Gene3D G3DSA:3.40.190.10 141 311 9.6E-58 T 13-09-2016 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 8.8E-57 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 307 333 8.8E-57 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 152 166 8.8E-57 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 262 281 8.8E-57 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 8.8E-57 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 8.8E-57 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 8.8E-57 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 212 231 8.8E-57 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 8.8E-57 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 175 194 8.8E-57 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 SUPERFAMILY SSF53850 24 359 3.17E-94 T 13-09-2016 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PIRSF PIRSF019574 4 363 2.8E-114 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 Pfam PF13416 Bacterial extracellular solute-binding protein 42 328 5.0E-34 T 13-09-2016 PMA3_RS13160 4b46fa4b6bdaa9027178e52cabf91de8 363 PANTHER PTHR30222:SF11 14 361 4.9E-119 T 13-09-2016 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 200 244 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 PANTHER PTHR11019 36 130 2.0E-73 T 13-09-2016 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 PANTHER PTHR11019 147 302 2.0E-73 T 13-09-2016 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 Gene3D G3DSA:1.10.10.60 253 295 1.9E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 SUPERFAMILY SSF46689 199 248 6.09E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 Pfam PF12833 Helix-turn-helix domain 221 295 4.1E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 Gene3D G3DSA:1.10.10.60 200 252 1.8E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 Pfam PF06719 AraC-type transcriptional regulator N-terminus 35 186 7.3E-45 T 13-09-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 SUPERFAMILY SSF46689 251 296 1.48E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 SMART SM00342 215 298 2.1E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 PANTHER PTHR11019:SF81 36 130 2.0E-73 T 13-09-2016 PMA3_RS10225 bd5f8443b312f91876908537c1ec4454 305 PANTHER PTHR11019:SF81 147 302 2.0E-73 T 13-09-2016 PMA3_RS01230 3a01a986f79369d738a477c0c2051289 200 Gene3D G3DSA:1.20.58.320 8 89 3.6E-19 T 13-09-2016 PMA3_RS01230 3a01a986f79369d738a477c0c2051289 200 PANTHER PTHR23004:SF7 28 200 4.3E-68 T 13-09-2016 PMA3_RS01230 3a01a986f79369d738a477c0c2051289 200 Gene3D G3DSA:1.25.40.10 91 200 3.5E-33 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS01230 3a01a986f79369d738a477c0c2051289 200 SUPERFAMILY SSF48452 3 196 2.2E-56 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS01230 3a01a986f79369d738a477c0c2051289 200 PANTHER PTHR23004 28 200 4.3E-68 T 13-09-2016 PMA3_RS01230 3a01a986f79369d738a477c0c2051289 200 Pfam PF06041 Bacterial protein of unknown function (DUF924) 9 197 3.9E-58 T 13-09-2016 IPR010323 Protein of unknown function DUF924 PMA3_RS24875 8826bbef632b2370e2aba0a6800abbe0 158 Gene3D G3DSA:3.30.450.20 26 121 1.6E-29 T 13-09-2016 PMA3_RS24875 8826bbef632b2370e2aba0a6800abbe0 158 SMART SM00091 5 75 1.5E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS24875 8826bbef632b2370e2aba0a6800abbe0 158 SMART SM00086 81 123 3.1E-7 T 13-09-2016 IPR001610 PAC motif PMA3_RS24875 8826bbef632b2370e2aba0a6800abbe0 158 Pfam PF13426 PAS domain 16 121 5.0E-20 T 13-09-2016 IPR000014 PAS domain PMA3_RS24875 8826bbef632b2370e2aba0a6800abbe0 158 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 129 2.0E-19 T 13-09-2016 IPR000014 PAS domain PMA3_RS24875 8826bbef632b2370e2aba0a6800abbe0 158 PANTHER PTHR24351 28 121 1.0E-25 T 13-09-2016 PMA3_RS24875 8826bbef632b2370e2aba0a6800abbe0 158 SUPERFAMILY SSF55785 11 121 1.62E-25 T 13-09-2016 IPR000014 PAS domain PMA3_RS01970 5342c312c837dd1f532ad6448568aed5 509 Pfam PF00672 HAMP domain 169 224 9.3E-8 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS01970 5342c312c837dd1f532ad6448568aed5 509 Pfam PF10144 Bacterial virulence factor haemolysin 31 153 8.5E-8 T 13-09-2016 IPR019305 Uncharacterised protein family Smp PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 PANTHER PTHR10804:SF75 1 258 1.1E-170 T 13-09-2016 PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 1.3E-21 T 13-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 1.3E-21 T 13-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 1.3E-21 T 13-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.3E-21 T 13-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 Pfam PF00557 Metallopeptidase family M24 13 241 2.1E-58 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 SUPERFAMILY SSF55920 5 253 6.93E-94 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 Gene3D G3DSA:3.90.230.10 5 256 6.1E-104 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 PANTHER PTHR10804 1 258 1.1E-170 T 13-09-2016 PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 13-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 7.5E-103 T 13-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PMA3_RS04820 d4deca94f9fec3170f259e33f91cb99b 260 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 43.097 T 13-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PMA3_RS27785 81cd8ef39c52568c20c15ff34cff0382 392 PANTHER PTHR13693:SF53 5 388 2.4E-175 T 13-09-2016 PMA3_RS27785 81cd8ef39c52568c20c15ff34cff0382 392 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 13-09-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PMA3_RS27785 81cd8ef39c52568c20c15ff34cff0382 392 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 17 378 3.3E-147 T 13-09-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 PMA3_RS27785 81cd8ef39c52568c20c15ff34cff0382 392 Pfam PF00155 Aminotransferase class I and II 39 376 1.3E-54 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS27785 81cd8ef39c52568c20c15ff34cff0382 392 PANTHER PTHR13693 5 388 2.4E-175 T 13-09-2016 PMA3_RS27785 81cd8ef39c52568c20c15ff34cff0382 392 Gene3D G3DSA:3.90.1150.10 270 378 4.9E-34 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS27785 81cd8ef39c52568c20c15ff34cff0382 392 Gene3D G3DSA:3.40.640.10 55 269 3.3E-81 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS27785 81cd8ef39c52568c20c15ff34cff0382 392 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 1 382 51.486 T 13-09-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 PMA3_RS27785 81cd8ef39c52568c20c15ff34cff0382 392 SUPERFAMILY SSF53383 5 386 2.39E-110 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 PANTHER PTHR30093:SF9 10 144 3.1E-48 T 13-09-2016 PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 Gene3D G3DSA:3.30.700.10 15 95 2.0E-8 T 13-09-2016 PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 PANTHER PTHR30093 10 144 3.1E-48 T 13-09-2016 PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 Pfam PF08334 Type II secretion system (T2SS), protein G 38 143 4.5E-44 T 13-09-2016 IPR013545 Type II secretion system protein G PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 5.3E-16 T 13-09-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 5.3E-16 T 13-09-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 10 34 3.8E-8 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 SUPERFAMILY SSF54523 41 143 2.41E-36 T 13-09-2016 PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 4.2E-8 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS17675 c9bef2c2217eed40cd170b4c2ebc56db 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 13 144 4.7E-58 T 13-09-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 PMA3_RS09865 3a3bdd903d7b108003f2a864581a8212 200 PANTHER PTHR33711:SF2 1 200 3.7E-76 T 13-09-2016 PMA3_RS09865 3a3bdd903d7b108003f2a864581a8212 200 Gene3D G3DSA:2.60.130.10 4 200 1.7E-65 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS09865 3a3bdd903d7b108003f2a864581a8212 200 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 9 200 9.2E-72 T 13-09-2016 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 PMA3_RS09865 3a3bdd903d7b108003f2a864581a8212 200 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 52 80 - T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS09865 3a3bdd903d7b108003f2a864581a8212 200 SUPERFAMILY SSF49482 4 200 6.93E-58 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS09865 3a3bdd903d7b108003f2a864581a8212 200 Pfam PF00775 Dioxygenase 30 190 1.2E-14 T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS09865 3a3bdd903d7b108003f2a864581a8212 200 PANTHER PTHR33711 1 200 3.7E-76 T 13-09-2016 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 PANTHER PTHR15184 1 459 0.0 T 13-09-2016 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 459 56.199 T 13-09-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 Gene3D G3DSA:2.40.10.170 2 73 1.9E-29 T 13-09-2016 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 1.6E-21 T 13-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 Gene3D G3DSA:3.40.50.300 75 342 2.0E-109 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 SUPERFAMILY SSF50615 3 73 4.97E-25 T 13-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 129 341 7.2E-64 T 13-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 SUPERFAMILY SSF47917 344 458 2.88E-53 T 13-09-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 SUPERFAMILY SSF52540 76 346 2.66E-92 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 459 1.3E-254 T 13-09-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 332 341 - T 13-09-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 Gene3D G3DSA:1.10.1140.10 344 459 1.0E-55 T 13-09-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 SMART SM00382 141 326 2.5E-4 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS30005 2ba449bbcb51144faa753f0073c1d4ca 459 PANTHER PTHR15184:SF44 1 459 0.0 T 13-09-2016 PMA3_RS29490 065179bda05ca534cf467633b53e0ef6 77 PANTHER PTHR13528 1 74 3.3E-35 T 13-09-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 PMA3_RS29490 065179bda05ca534cf467633b53e0ef6 77 Pfam PF00830 Ribosomal L28 family 3 61 8.7E-29 T 13-09-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 PMA3_RS29490 065179bda05ca534cf467633b53e0ef6 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 21.827 T 13-09-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS29490 065179bda05ca534cf467633b53e0ef6 77 Gene3D G3DSA:2.30.170.40 2 75 5.8E-36 T 13-09-2016 PMA3_RS29490 065179bda05ca534cf467633b53e0ef6 77 SUPERFAMILY SSF143800 2 74 1.96E-30 T 13-09-2016 PMA3_RS29490 065179bda05ca534cf467633b53e0ef6 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.2E-29 T 13-09-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 Gene3D G3DSA:3.30.70.1430 44 142 3.2E-23 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 SUPERFAMILY SSF82714 189 268 3.4E-11 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 SUPERFAMILY SSF82693 44 139 3.14E-20 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 PANTHER PTHR32063 5 1015 0.0 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 Gene3D G3DSA:1.10.3850.10 796 1008 7.5E-48 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 Gene3D G3DSA:1.20.1640.10 290 500 7.6E-40 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 PANTHER PTHR32063:SF7 5 1015 0.0 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 Gene3D G3DSA:3.30.70.1430 556 646 6.6E-4 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 Pfam PF00873 AcrB/AcrD/AcrF family 8 1004 6.2E-163 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 SUPERFAMILY SSF82714 705 789 4.19E-15 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 Gene3D G3DSA:3.30.2090.10 705 789 1.4E-14 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 Gene3D G3DSA:3.30.2090.10 191 269 2.6E-11 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 SUPERFAMILY SSF82866 788 1012 3.01E-43 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 SUPERFAMILY SSF82693 552 659 6.98E-7 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 SUPERFAMILY SSF82693 141 186 1.1E-19 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 SUPERFAMILY SSF82693 272 327 1.1E-19 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 SUPERFAMILY SSF82866 295 490 4.45E-33 T 13-09-2016 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 5.1E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 5.1E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 5.1E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 5.1E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 5.1E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS00645 928c0415911f26848b483ceefa125fcf 1017 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 5.1E-21 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 108 447 2.8E-29 T 13-09-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 411 - T 13-09-2016 IPR030390 RNA methyltransferase TrmA, active site PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 PANTHER PTHR11061:SF30 1 448 1.8E-115 T 13-09-2016 PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 Gene3D G3DSA:3.40.50.150 270 448 1.3E-59 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 PANTHER PTHR11061 1 448 1.8E-115 T 13-09-2016 PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 Gene3D G3DSA:2.40.50.140 19 97 4.5E-22 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 SUPERFAMILY SSF53335 86 448 9.58E-77 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 271 442 4.9E-62 T 13-09-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 SUPERFAMILY SSF50249 14 75 5.25E-11 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 13-09-2016 IPR030391 RNA methyltransferase TrmA, conserved site PMA3_RS05950 8bfecb84a9a3b660e639f18a268602c4 450 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 28 450 63.294 T 13-09-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 PMA3_RS15890 1c1ecb4c77d2ff3e85d72c46410726ab 337 PANTHER PTHR11732:SF273 1 335 1.2E-141 T 13-09-2016 PMA3_RS15890 1c1ecb4c77d2ff3e85d72c46410726ab 337 Gene3D G3DSA:3.20.20.100 9 317 4.2E-94 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS15890 1c1ecb4c77d2ff3e85d72c46410726ab 337 SUPERFAMILY SSF51430 1 313 4.71E-95 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS15890 1c1ecb4c77d2ff3e85d72c46410726ab 337 PRINTS PR00069 Aldo-keto reductase signature 39 63 1.7E-5 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS15890 1c1ecb4c77d2ff3e85d72c46410726ab 337 PRINTS PR00069 Aldo-keto reductase signature 135 152 1.7E-5 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS15890 1c1ecb4c77d2ff3e85d72c46410726ab 337 PRINTS PR00069 Aldo-keto reductase signature 104 122 1.7E-5 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS15890 1c1ecb4c77d2ff3e85d72c46410726ab 337 PANTHER PTHR11732 1 335 1.2E-141 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS15890 1c1ecb4c77d2ff3e85d72c46410726ab 337 Pfam PF00248 Aldo/keto reductase family 16 311 4.6E-68 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS20125 803076d629db25579268b9b1175efae1 657 PANTHER PTHR24220 7 394 4.9E-109 T 13-09-2016 PMA3_RS20125 803076d629db25579268b9b1175efae1 657 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS20125 803076d629db25579268b9b1175efae1 657 PANTHER PTHR24220:SF578 7 394 4.9E-109 T 13-09-2016 PMA3_RS20125 803076d629db25579268b9b1175efae1 657 Pfam PF12704 MacB-like periplasmic core domain 284 501 1.6E-34 T 13-09-2016 IPR025857 MacB-like periplasmic core domain PMA3_RS20125 803076d629db25579268b9b1175efae1 657 Pfam PF00005 ABC transporter 26 174 4.2E-29 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS20125 803076d629db25579268b9b1175efae1 657 Pfam PF02687 FtsX-like permease family 539 650 2.9E-19 T 13-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PMA3_RS20125 803076d629db25579268b9b1175efae1 657 SMART SM00382 35 222 3.8E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS20125 803076d629db25579268b9b1175efae1 657 SUPERFAMILY SSF52540 5 230 6.34E-67 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20125 803076d629db25579268b9b1175efae1 657 Gene3D G3DSA:3.40.50.300 4 226 2.1E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10160 fc0a980309f8d520a7027661049ff62b 266 Gene3D G3DSA:3.20.20.60 2 254 2.7E-79 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS10160 fc0a980309f8d520a7027661049ff62b 266 PANTHER PTHR30502:SF5 1 265 3.6E-97 T 13-09-2016 PMA3_RS10160 fc0a980309f8d520a7027661049ff62b 266 PANTHER PTHR30502 1 265 3.6E-97 T 13-09-2016 PMA3_RS10160 fc0a980309f8d520a7027661049ff62b 266 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 2.6E-59 T 13-09-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PMA3_RS10160 fc0a980309f8d520a7027661049ff62b 266 SUPERFAMILY SSF51621 1 254 6.91E-81 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS20925 034e6b608ce111e0ea49e3afd30282ac 360 Gene3D G3DSA:3.30.1890.10 52 200 2.9E-19 T 13-09-2016 PMA3_RS20925 034e6b608ce111e0ea49e3afd30282ac 360 Gene3D G3DSA:3.30.1890.10 274 311 2.9E-19 T 13-09-2016 PMA3_RS20925 034e6b608ce111e0ea49e3afd30282ac 360 SUPERFAMILY SSF160355 50 315 3.01E-43 T 13-09-2016 PMA3_RS20925 034e6b608ce111e0ea49e3afd30282ac 360 PANTHER PTHR32309 3 193 7.3E-17 T 13-09-2016 PMA3_RS20925 034e6b608ce111e0ea49e3afd30282ac 360 Pfam PF02706 Chain length determinant protein 13 164 2.0E-25 T 13-09-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PMA3_RS20925 034e6b608ce111e0ea49e3afd30282ac 360 Pfam PF13807 G-rich domain on putative tyrosine kinase 308 340 1.7E-6 T 13-09-2016 IPR032807 Tyrosine kinase, G-rich domain PMA3_RS26270 e1ef42f313439c8334ecb375bed34d1b 359 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 9 128 2.7E-32 T 13-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PMA3_RS26270 e1ef42f313439c8334ecb375bed34d1b 359 PANTHER PTHR13794 3 357 5.5E-79 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS26270 e1ef42f313439c8334ecb375bed34d1b 359 Gene3D G3DSA:3.30.390.10 2 124 1.5E-37 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS26270 e1ef42f313439c8334ecb375bed34d1b 359 SUPERFAMILY SSF54826 5 130 1.68E-26 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS26270 e1ef42f313439c8334ecb375bed34d1b 359 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 192 223 - T 13-09-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PMA3_RS26270 e1ef42f313439c8334ecb375bed34d1b 359 SMART SM00922 144 242 3.7E-22 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS26270 e1ef42f313439c8334ecb375bed34d1b 359 PANTHER PTHR13794:SF58 3 357 5.5E-79 T 13-09-2016 PMA3_RS26270 e1ef42f313439c8334ecb375bed34d1b 359 Gene3D G3DSA:3.20.20.120 125 347 1.2E-60 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS26270 e1ef42f313439c8334ecb375bed34d1b 359 Pfam PF13378 Enolase C-terminal domain-like 152 350 2.7E-53 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS26270 e1ef42f313439c8334ecb375bed34d1b 359 SUPERFAMILY SSF51604 116 358 2.1E-64 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 SUPERFAMILY SSF55874 170 338 1.96E-42 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 PANTHER PTHR24423 115 339 1.2E-59 T 13-09-2016 PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 PANTHER PTHR24423 1 11 1.2E-59 T 13-09-2016 PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 Gene3D G3DSA:3.30.565.10 168 338 2.4E-41 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 SMART SM00387 227 340 7.6E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 SMART SM00388 117 181 7.0E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 Pfam PF00512 His Kinase A (phospho-acceptor) domain 119 180 1.5E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 Gene3D G3DSA:1.10.287.130 110 167 1.9E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 227 339 3.0E-22 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 SUPERFAMILY SSF47384 104 182 1.04E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 264 278 8.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 8.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 292 8.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS25785 5ac276368a729a0c24ef71da22ff7cdf 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 337 8.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 Gene3D G3DSA:3.40.50.300 239 477 7.7E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 Gene3D G3DSA:3.40.50.300 2 231 6.4E-58 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 SUPERFAMILY SSF52540 7 229 1.18E-31 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 PIRSF PIRSF039117 1 485 1.5E-130 T 13-09-2016 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 PRINTS PR01874 DNA repair protein radA signature 235 258 1.3E-7 T 13-09-2016 PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 PRINTS PR01874 DNA repair protein radA signature 19 47 1.3E-7 T 13-09-2016 PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 PANTHER PTHR22942:SF43 166 461 4.8E-31 T 13-09-2016 PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 Pfam PF06745 KaiC 11 231 5.7E-29 T 13-09-2016 IPR014774 KaiC-like domain PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 Pfam PF06745 KaiC 249 463 4.7E-32 T 13-09-2016 IPR014774 KaiC-like domain PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 SMART SM00382 27 193 0.22 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 SMART SM00382 265 426 0.66 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 PANTHER PTHR22942 166 461 4.8E-31 T 13-09-2016 PMA3_RS25780 b8b10bc0bb0ee2a3e51a28cc5b272f58 486 SUPERFAMILY SSF52540 244 461 1.68E-31 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14555 7943eb3a21588f3ec4d270cc986de06d 265 PANTHER PTHR34598 31 265 1.9E-85 T 13-09-2016 PMA3_RS14555 7943eb3a21588f3ec4d270cc986de06d 265 PANTHER PTHR34598:SF2 31 265 1.9E-85 T 13-09-2016 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PANTHER PTHR30620 85 468 0.0 T 13-09-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PANTHER PTHR30620 487 765 0.0 T 13-09-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PANTHER PTHR30620 35 59 0.0 T 13-09-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 Gene3D G3DSA:3.40.50.1700 494 651 2.2E-75 T 13-09-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 Gene3D G3DSA:3.40.50.1700 380 460 2.2E-75 T 13-09-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 270 288 4.9E-21 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 200 216 4.9E-21 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 117 136 4.9E-21 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 98 114 4.9E-21 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 163 179 4.9E-21 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 270 287 - T 13-09-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 SUPERFAMILY SSF52279 392 461 3.92E-58 T 13-09-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 SUPERFAMILY SSF52279 495 651 3.92E-58 T 13-09-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 44 347 7.7E-75 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PANTHER PTHR30620:SF5 85 468 0.0 T 13-09-2016 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PANTHER PTHR30620:SF5 487 765 0.0 T 13-09-2016 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 PANTHER PTHR30620:SF5 35 59 0.0 T 13-09-2016 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 Gene3D G3DSA:3.20.20.300 36 363 1.1E-98 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 392 648 2.1E-56 T 13-09-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 Pfam PF14310 Fibronectin type III-like domain 686 754 2.4E-20 T 13-09-2016 IPR026891 Fibronectin type III-like domain PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 SUPERFAMILY SSF51445 30 391 2.0E-94 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS05540 10ae0e08c6bd359068d2497e2f217b87 765 SMART SM01217 685 754 1.0E-29 T 13-09-2016 IPR026891 Fibronectin type III-like domain PMA3_RS11225 482edfdbb84ae971e912f5b26383ddf1 341 PANTHER PTHR30222 23 338 1.4E-78 T 13-09-2016 PMA3_RS11225 482edfdbb84ae971e912f5b26383ddf1 341 Pfam PF13416 Bacterial extracellular solute-binding protein 46 298 7.3E-40 T 13-09-2016 PMA3_RS11225 482edfdbb84ae971e912f5b26383ddf1 341 Gene3D G3DSA:3.40.190.10 29 118 1.8E-8 T 13-09-2016 PMA3_RS11225 482edfdbb84ae971e912f5b26383ddf1 341 SUPERFAMILY SSF53850 28 339 1.13E-68 T 13-09-2016 PMA3_RS11225 482edfdbb84ae971e912f5b26383ddf1 341 Gene3D G3DSA:3.40.190.10 129 283 2.7E-33 T 13-09-2016 PMA3_RS11225 482edfdbb84ae971e912f5b26383ddf1 341 PANTHER PTHR30222:SF2 23 338 1.4E-78 T 13-09-2016 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 260 293 - T 13-09-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 SUPERFAMILY SSF63867 333 405 1.57E-16 T 13-09-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 Gene3D G3DSA:2.40.340.10 338 404 8.9E-14 T 13-09-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 Pfam PF03454 MoeA C-terminal region (domain IV) 337 403 1.9E-14 T 13-09-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 PANTHER PTHR10192:SF17 11 407 5.6E-180 T 13-09-2016 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 184 320 3.6E-29 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 Gene3D G3DSA:2.170.190.11 59 138 1.1E-27 T 13-09-2016 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 Pfam PF03453 MoeA N-terminal region (domain I and II) 16 175 3.6E-34 T 13-09-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 Gene3D G3DSA:3.90.105.10 139 170 1.7E-19 T 13-09-2016 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 Gene3D G3DSA:3.40.980.10 171 337 1.3E-59 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 SUPERFAMILY SSF53218 185 329 1.28E-40 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 Pfam PF00994 Probable molybdopterin binding domain 188 323 5.5E-25 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 SUPERFAMILY SSF63882 13 184 1.28E-50 T 13-09-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 PANTHER PTHR10192 11 407 5.6E-180 T 13-09-2016 PMA3_RS07185 c5596f01b290126b0b1f8aea50f3bded 408 SMART SM00852 188 324 5.7E-40 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS14145 ce087d99cb5530650cbd3c80a56c175b 565 PANTHER PTHR24096 9 550 1.0E-160 T 13-09-2016 PMA3_RS14145 ce087d99cb5530650cbd3c80a56c175b 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 543 1.3E-17 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS14145 ce087d99cb5530650cbd3c80a56c175b 565 Pfam PF00501 AMP-binding enzyme 36 459 8.8E-101 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS14145 ce087d99cb5530650cbd3c80a56c175b 565 Gene3D G3DSA:2.30.38.10 378 453 1.3E-25 T 13-09-2016 PMA3_RS14145 ce087d99cb5530650cbd3c80a56c175b 565 Gene3D G3DSA:3.40.50.980 214 369 2.9E-38 T 13-09-2016 PMA3_RS14145 ce087d99cb5530650cbd3c80a56c175b 565 Gene3D G3DSA:3.30.300.30 454 553 8.5E-32 T 13-09-2016 PMA3_RS14145 ce087d99cb5530650cbd3c80a56c175b 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS14145 ce087d99cb5530650cbd3c80a56c175b 565 SUPERFAMILY SSF56801 11 555 5.1E-143 T 13-09-2016 PMA3_RS14145 ce087d99cb5530650cbd3c80a56c175b 565 Gene3D G3DSA:3.40.50.980 31 213 5.0E-35 T 13-09-2016 PMA3_RS22125 236496cb68e14e6e18e68ef3c97bbdca 388 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 44 371 1.1E-25 T 13-09-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 PMA3_RS22125 236496cb68e14e6e18e68ef3c97bbdca 388 SUPERFAMILY SSF53649 40 384 2.11E-39 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS22125 236496cb68e14e6e18e68ef3c97bbdca 388 Gene3D G3DSA:3.40.720.10 38 312 1.4E-27 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS22335 0b155324d27ac7dfd84e15dcfd51a5cf 156 Pfam PF00588 SpoU rRNA Methylase family 9 140 3.0E-16 T 13-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PMA3_RS22335 0b155324d27ac7dfd84e15dcfd51a5cf 156 SUPERFAMILY SSF75217 8 144 4.5E-26 T 13-09-2016 IPR029028 Alpha/beta knot methyltransferases PMA3_RS22335 0b155324d27ac7dfd84e15dcfd51a5cf 156 Gene3D G3DSA:3.40.1280.10 9 143 3.3E-16 T 13-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PMA3_RS08690 7745ef109df93686ca11113aec91eecb 240 PANTHER PTHR23344:SF20 3 239 3.6E-66 T 13-09-2016 PMA3_RS08690 7745ef109df93686ca11113aec91eecb 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 231 1.7E-32 T 13-09-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PMA3_RS08690 7745ef109df93686ca11113aec91eecb 240 Gene3D G3DSA:3.20.20.190 2 238 9.7E-62 T 13-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PMA3_RS08690 7745ef109df93686ca11113aec91eecb 240 PANTHER PTHR23344 3 239 3.6E-66 T 13-09-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 PMA3_RS08690 7745ef109df93686ca11113aec91eecb 240 SUPERFAMILY SSF51695 2 238 2.43E-62 T 13-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PMA3_RS03640 6a694de1f083a9dcda9c2a7e3b8a500b 207 PANTHER PTHR30462 23 201 5.9E-60 T 13-09-2016 PMA3_RS03640 6a694de1f083a9dcda9c2a7e3b8a500b 207 PANTHER PTHR30462:SF3 23 201 5.9E-60 T 13-09-2016 PMA3_RS03640 6a694de1f083a9dcda9c2a7e3b8a500b 207 Pfam PF04403 Paraquat-inducible protein A 46 200 1.6E-56 T 13-09-2016 IPR007498 Paraquat-inducible protein A PMA3_RS24550 cf831cca2b93beb92babe29595be3e73 208 Pfam PF00510 Cytochrome c oxidase subunit III 27 206 2.3E-19 T 13-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PMA3_RS24550 cf831cca2b93beb92babe29595be3e73 208 PANTHER PTHR11403 12 208 2.7E-107 T 13-09-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 PMA3_RS24550 cf831cca2b93beb92babe29595be3e73 208 SUPERFAMILY SSF81452 12 206 2.09E-59 T 13-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PMA3_RS24550 cf831cca2b93beb92babe29595be3e73 208 Gene3D G3DSA:1.20.120.80 28 206 2.9E-50 T 13-09-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 PMA3_RS24550 cf831cca2b93beb92babe29595be3e73 208 PANTHER PTHR11403:SF2 12 208 2.7E-107 T 13-09-2016 PMA3_RS24550 cf831cca2b93beb92babe29595be3e73 208 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 29 208 4.3E-85 T 13-09-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 PMA3_RS14000 8336a50d8297d44138ab15a9f1836889 204 Pfam PF09347 Domain of unknown function (DUF1989) 15 178 1.9E-52 T 13-09-2016 IPR018959 Domain of unknown function DUF1989 PMA3_RS14000 8336a50d8297d44138ab15a9f1836889 204 PANTHER PTHR31527 11 203 9.2E-50 T 13-09-2016 PMA3_RS14000 8336a50d8297d44138ab15a9f1836889 204 PANTHER PTHR31527:SF0 11 203 9.2E-50 T 13-09-2016 PMA3_RS16150 9f947ed8d13d525f83d02d3ec5da7efb 228 Pfam PF13353 4Fe-4S single cluster domain 16 91 7.6E-10 T 13-09-2016 PMA3_RS16150 9f947ed8d13d525f83d02d3ec5da7efb 228 PANTHER PTHR30352:SF4 3 220 3.9E-40 T 13-09-2016 PMA3_RS16150 9f947ed8d13d525f83d02d3ec5da7efb 228 Pfam PF04055 Radical SAM superfamily 24 155 1.9E-16 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS16150 9f947ed8d13d525f83d02d3ec5da7efb 228 SUPERFAMILY SSF102114 16 191 5.36E-22 T 13-09-2016 PMA3_RS16150 9f947ed8d13d525f83d02d3ec5da7efb 228 PANTHER PTHR30352 3 220 3.9E-40 T 13-09-2016 PMA3_RS16150 9f947ed8d13d525f83d02d3ec5da7efb 228 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 4 191 3.8E-65 T 13-09-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein PMA3_RS16150 9f947ed8d13d525f83d02d3ec5da7efb 228 Gene3D G3DSA:3.20.20.70 19 194 2.5E-22 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS13680 8eba6573bb2847aa67722b375981d16a 468 PANTHER PTHR13847 1 460 4.3E-164 T 13-09-2016 PMA3_RS13680 8eba6573bb2847aa67722b375981d16a 468 Pfam PF01266 FAD dependent oxidoreductase 31 393 3.1E-47 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS13680 8eba6573bb2847aa67722b375981d16a 468 PANTHER PTHR13847:SF199 1 460 4.3E-164 T 13-09-2016 PMA3_RS13680 8eba6573bb2847aa67722b375981d16a 468 Gene3D G3DSA:3.50.50.60 21 114 3.8E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS13680 8eba6573bb2847aa67722b375981d16a 468 Gene3D G3DSA:3.50.50.60 178 254 3.8E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS13680 8eba6573bb2847aa67722b375981d16a 468 Gene3D G3DSA:3.50.50.60 357 401 3.8E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS13680 8eba6573bb2847aa67722b375981d16a 468 SUPERFAMILY SSF51905 182 307 2.85E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS13680 8eba6573bb2847aa67722b375981d16a 468 SUPERFAMILY SSF51905 3 124 2.85E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 PANTHER PTHR11533:SF152 619 884 0.0 T 13-09-2016 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 PANTHER PTHR11533:SF152 2 595 0.0 T 13-09-2016 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 SUPERFAMILY SSF63737 4 199 5.75E-44 T 13-09-2016 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 PANTHER PTHR11533 619 884 0.0 T 13-09-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 884 0.0 T 13-09-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 Gene3D G3DSA:1.10.390.10 314 457 2.2E-30 T 13-09-2016 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 5.7E-11 T 13-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 5.7E-11 T 13-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 5.7E-11 T 13-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 5.7E-11 T 13-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 5.7E-11 T 13-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 Gene3D G3DSA:1.25.50.10 556 885 4.1E-130 T 13-09-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 Pfam PF11940 Domain of unknown function (DUF3458) 464 840 4.0E-139 T 13-09-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 SUPERFAMILY SSF55486 210 456 1.34E-75 T 13-09-2016 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 PANTHER PTHR11533 2 595 0.0 T 13-09-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 PMA3_RS15305 aa3bd759efeff318715c9142dd0bc32e 885 Pfam PF01433 Peptidase family M1 56 390 2.0E-71 T 13-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PMA3_RS13190 181ed89cd3f7f0f49d872ce8672c56b8 581 PANTHER PTHR30443 6 564 3.2E-282 T 13-09-2016 PMA3_RS13190 181ed89cd3f7f0f49d872ce8672c56b8 581 PANTHER PTHR30443:SF2 6 564 3.2E-282 T 13-09-2016 PMA3_RS13190 181ed89cd3f7f0f49d872ce8672c56b8 581 Pfam PF00884 Sulfatase 239 526 4.2E-43 T 13-09-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PMA3_RS13190 181ed89cd3f7f0f49d872ce8672c56b8 581 SUPERFAMILY SSF53649 239 552 1.57E-33 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS13190 181ed89cd3f7f0f49d872ce8672c56b8 581 Gene3D G3DSA:3.40.720.10 241 531 6.1E-15 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS24075 afd54ff519770dd37d4eab15538b992b 130 Pfam PF09394 Chagasin family peptidase inhibitor I42 38 126 4.7E-20 T 13-09-2016 IPR018990 Proteinase inhibitor I42, chagasin PMA3_RS24075 afd54ff519770dd37d4eab15538b992b 130 PANTHER PTHR36530:SF2 1 130 2.7E-30 T 13-09-2016 PMA3_RS24075 afd54ff519770dd37d4eab15538b992b 130 PANTHER PTHR36530 1 130 2.7E-30 T 13-09-2016 PMA3_RS24075 afd54ff519770dd37d4eab15538b992b 130 SUPERFAMILY SSF141066 27 129 2.35E-29 T 13-09-2016 IPR018990 Proteinase inhibitor I42, chagasin PMA3_RS26000 0c6bd75907abb900b00b8cf008cb15de 206 PANTHER PTHR23044 20 204 2.9E-41 T 13-09-2016 PMA3_RS26000 0c6bd75907abb900b00b8cf008cb15de 206 Pfam PF00929 Exonuclease 26 199 8.5E-14 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS26000 0c6bd75907abb900b00b8cf008cb15de 206 Gene3D G3DSA:3.30.420.10 18 205 5.8E-46 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS26000 0c6bd75907abb900b00b8cf008cb15de 206 SMART SM00479 22 206 1.7E-4 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS26000 0c6bd75907abb900b00b8cf008cb15de 206 PANTHER PTHR23044:SF5 20 204 2.9E-41 T 13-09-2016 PMA3_RS26000 0c6bd75907abb900b00b8cf008cb15de 206 SUPERFAMILY SSF53098 21 204 2.02E-23 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS09605 1aee7624289522269bf0491d9c43c1a1 205 Gene3D G3DSA:1.10.260.40 19 83 7.4E-20 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS09605 1aee7624289522269bf0491d9c43c1a1 205 PANTHER PTHR10245 1 196 1.9E-46 T 13-09-2016 PMA3_RS09605 1aee7624289522269bf0491d9c43c1a1 205 Gene3D G3DSA:2.60.120.10 108 196 3.1E-19 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS09605 1aee7624289522269bf0491d9c43c1a1 205 Pfam PF07883 Cupin domain 125 192 1.4E-11 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS09605 1aee7624289522269bf0491d9c43c1a1 205 SUPERFAMILY SSF51182 5 192 1.18E-16 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS09605 1aee7624289522269bf0491d9c43c1a1 205 SMART SM00530 25 80 1.8E-12 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS09605 1aee7624289522269bf0491d9c43c1a1 205 PANTHER PTHR10245:SF9 1 196 1.9E-46 T 13-09-2016 PMA3_RS09605 1aee7624289522269bf0491d9c43c1a1 205 Pfam PF01381 Helix-turn-helix 26 79 4.1E-11 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS09055 eb6a38a4e3ac02407553f2a998c862e7 207 Gene3D G3DSA:3.20.20.70 6 204 9.9E-73 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS09055 eb6a38a4e3ac02407553f2a998c862e7 207 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 206 42.877 T 13-09-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 PMA3_RS09055 eb6a38a4e3ac02407553f2a998c862e7 207 PANTHER PTHR22854 7 206 9.4E-72 T 13-09-2016 PMA3_RS09055 eb6a38a4e3ac02407553f2a998c862e7 207 SUPERFAMILY SSF51366 6 204 9.57E-65 T 13-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PMA3_RS09055 eb6a38a4e3ac02407553f2a998c862e7 207 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 201 1.9E-50 T 13-09-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 PMA3_RS09055 eb6a38a4e3ac02407553f2a998c862e7 207 PANTHER PTHR22854:SF6 7 206 9.4E-72 T 13-09-2016 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 Pfam PF00561 alpha/beta hydrolase fold 36 296 1.4E-34 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 310 4.1E-132 T 13-09-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PIRSF PIRSF006431 1 315 9.5E-139 T 13-09-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 8.3E-14 T 13-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 8.3E-14 T 13-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 8.3E-14 T 13-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 SUPERFAMILY SSF53474 2 296 6.33E-65 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PANTHER PTHR10992 1 174 7.3E-124 T 13-09-2016 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 Gene3D G3DSA:3.40.50.1820 12 297 9.9E-74 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PANTHER PTHR10992:SF860 210 311 7.3E-124 T 13-09-2016 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PANTHER PTHR10992:SF860 1 174 7.3E-124 T 13-09-2016 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 7.4E-6 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 7.4E-6 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 7.4E-6 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01310 fc69c6ea95bc9888ad91f8c65c93c920 323 PANTHER PTHR10992 210 311 7.3E-124 T 13-09-2016 PMA3_RS06275 fa4b9a6bad417e03808119c207af0f53 425 PANTHER PTHR30518 1 341 1.0E-91 T 13-09-2016 PMA3_RS06275 fa4b9a6bad417e03808119c207af0f53 425 Pfam PF02618 YceG-like family 44 328 1.3E-77 T 13-09-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like PMA3_RS06275 fa4b9a6bad417e03808119c207af0f53 425 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 3 330 1.6E-81 T 13-09-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like PMA3_RS06275 fa4b9a6bad417e03808119c207af0f53 425 Gene3D G3DSA:3.30.160.60 304 336 5.8E-16 T 13-09-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 PMA3_RS06275 fa4b9a6bad417e03808119c207af0f53 425 PANTHER PTHR30518:SF2 1 341 1.0E-91 T 13-09-2016 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 6.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 433 6.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 375 6.5E-10 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 SMART SM00387 325 436 4.0E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 Gene3D G3DSA:3.40.50.2300 457 574 1.0E-17 T 13-09-2016 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 Pfam PF00072 Response regulator receiver domain 461 570 9.7E-11 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 Gene3D G3DSA:3.30.450.20 36 130 9.4E-9 T 13-09-2016 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 433 3.3E-16 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 PANTHER PTHR24423:SF439 214 574 1.9E-124 T 13-09-2016 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 PANTHER PTHR24423:SF439 34 174 1.9E-124 T 13-09-2016 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 SUPERFAMILY SSF52172 456 574 8.97E-19 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 SUPERFAMILY SSF47384 200 279 1.08E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 SMART SM00388 216 281 6.7E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 SUPERFAMILY SSF55874 271 434 1.57E-34 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 PANTHER PTHR24423 34 174 1.9E-124 T 13-09-2016 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 Gene3D G3DSA:3.30.450.20 131 178 2.9E-4 T 13-09-2016 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 Gene3D G3DSA:3.30.565.10 289 437 1.3E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 SUPERFAMILY SSF55785 65 166 9.52E-11 T 13-09-2016 IPR000014 PAS domain PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 280 8.5E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 Gene3D G3DSA:1.10.287.130 209 277 1.7E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 PANTHER PTHR24423 214 574 1.9E-124 T 13-09-2016 PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 164 3.1E-10 T 13-09-2016 IPR000014 PAS domain PMA3_RS15635 f3a5afd1226e50d5e89454078a0f06e7 575 SMART SM00448 458 570 2.5E-8 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS03430 0e2e82e39df16ce5445ac4c4561c706f 983 Pfam PF05359 Domain of Unknown Function (DUF748) 371 520 8.5E-36 T 13-09-2016 IPR008023 Protein of unknown function DUF748 PMA3_RS03430 0e2e82e39df16ce5445ac4c4561c706f 983 Pfam PF05359 Domain of Unknown Function (DUF748) 586 731 5.4E-43 T 13-09-2016 IPR008023 Protein of unknown function DUF748 PMA3_RS03430 0e2e82e39df16ce5445ac4c4561c706f 983 Pfam PF05359 Domain of Unknown Function (DUF748) 144 294 4.8E-30 T 13-09-2016 IPR008023 Protein of unknown function DUF748 PMA3_RS03430 0e2e82e39df16ce5445ac4c4561c706f 983 PANTHER PTHR30441:SF2 816 888 9.8E-114 T 13-09-2016 PMA3_RS03430 0e2e82e39df16ce5445ac4c4561c706f 983 PANTHER PTHR30441:SF2 5 762 9.8E-114 T 13-09-2016 PMA3_RS03430 0e2e82e39df16ce5445ac4c4561c706f 983 PANTHER PTHR30441 816 888 9.8E-114 T 13-09-2016 PMA3_RS03430 0e2e82e39df16ce5445ac4c4561c706f 983 PANTHER PTHR30441 5 762 9.8E-114 T 13-09-2016 PMA3_RS03430 0e2e82e39df16ce5445ac4c4561c706f 983 Gene3D G3DSA:3.30.1330.60 928 961 1.0E-8 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS03430 0e2e82e39df16ce5445ac4c4561c706f 983 Gene3D G3DSA:3.30.1330.60 799 842 1.0E-8 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 Pfam PF00871 Acetokinase family 10 389 2.5E-101 T 13-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 PANTHER PTHR21060:SF11 6 403 1.7E-136 T 13-09-2016 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 SUPERFAMILY SSF53067 9 200 1.81E-55 T 13-09-2016 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 Gene3D G3DSA:3.30.420.40 210 395 1.3E-60 T 13-09-2016 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 Gene3D G3DSA:3.30.420.40 10 209 1.0E-8 T 13-09-2016 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 10 21 - T 13-09-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 SUPERFAMILY SSF53067 163 395 5.18E-66 T 13-09-2016 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 PRINTS PR00471 Acetate kinase family signature 377 389 4.5E-27 T 13-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 PRINTS PR00471 Acetate kinase family signature 207 228 4.5E-27 T 13-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 PRINTS PR00471 Acetate kinase family signature 178 191 4.5E-27 T 13-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 PRINTS PR00471 Acetate kinase family signature 325 341 4.5E-27 T 13-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 PRINTS PR00471 Acetate kinase family signature 10 21 4.5E-27 T 13-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 PANTHER PTHR21060 6 403 1.7E-136 T 13-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 PIRSF PIRSF000722 6 400 1.1E-123 T 13-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 Hamap MF_00020 Acetate kinase [ackA]. 1 399 140.007 T 13-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS12465 ae8ff65f3dcbf0eea1eb3cd461124349 403 TIGRFAM TIGR00016 ackA: acetate kinase 8 396 1.9E-107 T 13-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 PANTHER PTHR26402:SF575 1 224 1.8E-99 T 13-09-2016 PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.3E-26 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 Gene3D G3DSA:1.10.10.10 124 222 3.4E-33 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 PANTHER PTHR26402 1 224 1.8E-99 T 13-09-2016 PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 SUPERFAMILY SSF52172 1 122 4.13E-39 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 SMART SM00448 1 111 2.9E-42 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 4.4E-109 T 13-09-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 SMART SM00862 145 220 2.5E-25 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 SUPERFAMILY SSF46894 124 221 3.4E-30 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS06465 addd0d4c21f41826cb550dc5d553e058 224 Gene3D G3DSA:3.40.50.2300 1 120 3.2E-38 T 13-09-2016 PMA3_RS11460 e49dc1587b529c1fa86f7ccc5c81dc96 234 PANTHER PTHR13604 2 224 1.9E-37 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS11460 e49dc1587b529c1fa86f7ccc5c81dc96 234 Gene3D G3DSA:3.90.1680.10 1 224 1.0E-53 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS11460 e49dc1587b529c1fa86f7ccc5c81dc96 234 Pfam PF02586 SOS response associated peptidase (SRAP) 1 214 1.4E-40 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS11460 e49dc1587b529c1fa86f7ccc5c81dc96 234 SUPERFAMILY SSF143081 2 219 2.22E-53 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 408 7.6E-229 T 13-09-2016 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 Gene3D G3DSA:3.50.50.60 175 253 3.3E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 Gene3D G3DSA:3.50.50.60 18 111 3.3E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 Gene3D G3DSA:3.50.50.60 344 402 3.3E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 SUPERFAMILY SSF51905 33 254 3.95E-46 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 SUPERFAMILY SSF51905 344 402 3.95E-46 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 PANTHER PTHR13847:SF44 11 403 4.6E-67 T 13-09-2016 PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 PANTHER PTHR13847 11 403 4.6E-67 T 13-09-2016 PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 Gene3D G3DSA:3.30.9.10 116 174 6.7E-10 T 13-09-2016 PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 Gene3D G3DSA:3.30.9.10 254 343 6.7E-10 T 13-09-2016 PMA3_RS27960 e486189bce86abd4a1061284d5f6317d 416 Pfam PF01266 FAD dependent oxidoreductase 34 380 4.8E-53 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS19595 9cefb838f8121a0f4bd3dbb2803eb9a3 72 SUPERFAMILY SSF50249 1 70 1.44E-28 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS19595 9cefb838f8121a0f4bd3dbb2803eb9a3 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.4E-38 T 13-09-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PMA3_RS19595 9cefb838f8121a0f4bd3dbb2803eb9a3 72 SMART SM00316 4 72 1.7E-6 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS19595 9cefb838f8121a0f4bd3dbb2803eb9a3 72 PANTHER PTHR33370 1 72 9.8E-49 T 13-09-2016 PMA3_RS19595 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Gene3D G3DSA:2.40.50.140 1 71 1.0E-38 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS19595 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.985 T 13-09-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PMA3_RS19595 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.6E-27 T 13-09-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 PMA3_RS08035 1418f523004028663b17247ce48c04a7 441 PANTHER PTHR30217 1 208 1.8E-221 T 13-09-2016 PMA3_RS08035 1418f523004028663b17247ce48c04a7 441 Pfam PF16325 Peptidase family U32 C-terminal domain 355 436 1.2E-19 T 13-09-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS08035 1418f523004028663b17247ce48c04a7 441 PANTHER PTHR30217 242 437 1.8E-221 T 13-09-2016 PMA3_RS08035 1418f523004028663b17247ce48c04a7 441 PANTHER PTHR30217:SF6 242 437 1.8E-221 T 13-09-2016 PMA3_RS08035 1418f523004028663b17247ce48c04a7 441 ProSitePatterns PS01276 Peptidase family U32 signature. 164 182 - T 13-09-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS08035 1418f523004028663b17247ce48c04a7 441 Pfam PF01136 Peptidase family U32 78 338 1.0E-95 T 13-09-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS08035 1418f523004028663b17247ce48c04a7 441 PANTHER PTHR30217:SF6 1 208 1.8E-221 T 13-09-2016 PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 21 417 5.3E-134 T 13-09-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 PIRSF PIRSF001235 17 423 7.3E-135 T 13-09-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 Pfam PF01546 Peptidase family M20/M25/M40 91 417 2.6E-39 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 SUPERFAMILY SSF53187 10 234 1.66E-95 T 13-09-2016 PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 SUPERFAMILY SSF53187 347 420 1.66E-95 T 13-09-2016 PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 Gene3D G3DSA:3.30.70.360 237 340 7.1E-39 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 PANTHER PTHR32494 18 427 2.6E-247 T 13-09-2016 PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 SUPERFAMILY SSF55031 224 340 3.79E-31 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 Gene3D G3DSA:3.40.630.10 18 236 4.4E-113 T 13-09-2016 PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 Gene3D G3DSA:3.40.630.10 362 421 4.4E-113 T 13-09-2016 PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 PANTHER PTHR32494:SF6 18 427 2.6E-247 T 13-09-2016 PMA3_RS12635 bbaabfab43dd621b758a5fa49346b8b0 428 Pfam PF07687 Peptidase dimerisation domain 224 323 2.9E-5 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 SUPERFAMILY SSF52172 6 193 1.17E-41 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 Gene3D G3DSA:1.10.10.60 400 450 1.1E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 SUPERFAMILY SSF46689 399 450 1.08E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 Gene3D G3DSA:3.40.50.2300 6 127 5.1E-33 T 13-09-2016 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 SUPERFAMILY SSF52540 148 377 3.28E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 Pfam PF02954 Bacterial regulatory protein, Fis family 407 447 1.1E-5 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 Pfam PF00072 Response regulator receiver domain 9 118 7.1E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 Gene3D G3DSA:3.40.50.300 147 320 1.6E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 SMART SM00382 168 311 4.0E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 PANTHER PTHR32071 1 460 1.7E-256 T 13-09-2016 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 Pfam PF00158 Sigma-54 interaction domain 148 314 7.4E-67 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 PANTHER PTHR32071:SF40 1 460 1.7E-256 T 13-09-2016 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 Gene3D G3DSA:1.10.8.60 321 380 4.3E-19 T 13-09-2016 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS00910 1fe47f7189fa7021966f1a05936f6330 464 SMART SM00448 7 118 6.4E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 Gene3D G3DSA:3.30.870.10 286 479 1.4E-31 T 13-09-2016 PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 Gene3D G3DSA:3.30.870.10 49 241 3.7E-39 T 13-09-2016 PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 SUPERFAMILY SSF56024 283 485 1.59E-28 T 13-09-2016 PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 PANTHER PTHR21248:SF12 414 508 2.4E-165 T 13-09-2016 PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 PANTHER PTHR21248:SF12 10 394 2.4E-165 T 13-09-2016 PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 SUPERFAMILY SSF56024 49 248 1.44E-43 T 13-09-2016 PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 Pfam PF13091 PLD-like domain 72 224 8.3E-25 T 13-09-2016 IPR025202 Phospholipase D-like domain PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 Pfam PF13091 PLD-like domain 324 462 8.6E-16 T 13-09-2016 IPR025202 Phospholipase D-like domain PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 SMART SM00155 413 440 1.2E-4 T 13-09-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 SMART SM00155 165 192 1.4E-4 T 13-09-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 PANTHER PTHR21248 414 508 2.4E-165 T 13-09-2016 PMA3_RS29450 4644f9dec3aedd62c2678e4e2e612f73 521 PANTHER PTHR21248 10 394 2.4E-165 T 13-09-2016 PMA3_RS25230 e29b6252c2fa5cb179adaa3058241fb4 353 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 302 1.9E-74 T 13-09-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 PMA3_RS25230 e29b6252c2fa5cb179adaa3058241fb4 353 PANTHER PTHR10846 10 302 4.6E-56 T 13-09-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 PMA3_RS25230 e29b6252c2fa5cb179adaa3058241fb4 353 Pfam PF01699 Sodium/calcium exchanger protein 4 139 7.5E-24 T 13-09-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 PMA3_RS25230 e29b6252c2fa5cb179adaa3058241fb4 353 Pfam PF01699 Sodium/calcium exchanger protein 164 304 3.2E-28 T 13-09-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 PMA3_RS12325 dcd4ba1b088f66cd3d4a4d20be38ef87 270 Gene3D G3DSA:3.40.50.300 19 266 1.2E-79 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12325 dcd4ba1b088f66cd3d4a4d20be38ef87 270 SUPERFAMILY SSF52540 20 263 4.05E-74 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12325 dcd4ba1b088f66cd3d4a4d20be38ef87 270 PANTHER PTHR24220 22 269 1.1E-121 T 13-09-2016 PMA3_RS12325 dcd4ba1b088f66cd3d4a4d20be38ef87 270 SMART SM00382 45 242 2.5E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS12325 dcd4ba1b088f66cd3d4a4d20be38ef87 270 PANTHER PTHR24220:SF447 22 269 1.1E-121 T 13-09-2016 PMA3_RS12325 dcd4ba1b088f66cd3d4a4d20be38ef87 270 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS12325 dcd4ba1b088f66cd3d4a4d20be38ef87 270 PIRSF PIRSF039085 17 270 1.5E-110 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS12325 dcd4ba1b088f66cd3d4a4d20be38ef87 270 Pfam PF00005 ABC transporter 36 194 4.7E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS14760 20993678b49ef56b5abe20dd41f36063 356 SMART SM00382 28 213 4.5E-20 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS14760 20993678b49ef56b5abe20dd41f36063 356 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS14760 20993678b49ef56b5abe20dd41f36063 356 Gene3D G3DSA:3.40.50.300 8 238 1.6E-75 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14760 20993678b49ef56b5abe20dd41f36063 356 PANTHER PTHR24220:SF282 5 283 1.1E-115 T 13-09-2016 PMA3_RS14760 20993678b49ef56b5abe20dd41f36063 356 SUPERFAMILY SSF52540 4 239 4.88E-73 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14760 20993678b49ef56b5abe20dd41f36063 356 SUPERFAMILY SSF50331 242 346 2.72E-6 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS14760 20993678b49ef56b5abe20dd41f36063 356 PANTHER PTHR24220 5 283 1.1E-115 T 13-09-2016 PMA3_RS14760 20993678b49ef56b5abe20dd41f36063 356 Pfam PF00005 ABC transporter 19 163 8.8E-37 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS08875 7627b66c067058caf898882eac3a2d0a 206 SUPERFAMILY SSF48498 91 205 5.0E-5 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS08875 7627b66c067058caf898882eac3a2d0a 206 PANTHER PTHR30055 6 201 3.4E-59 T 13-09-2016 PMA3_RS08875 7627b66c067058caf898882eac3a2d0a 206 Gene3D G3DSA:1.10.357.10 11 204 2.0E-28 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS08875 7627b66c067058caf898882eac3a2d0a 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 1.5E-12 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS08875 7627b66c067058caf898882eac3a2d0a 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 9.9E-6 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS08875 7627b66c067058caf898882eac3a2d0a 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 9.9E-6 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS08875 7627b66c067058caf898882eac3a2d0a 206 PANTHER PTHR30055:SF60 6 201 3.4E-59 T 13-09-2016 PMA3_RS08875 7627b66c067058caf898882eac3a2d0a 206 SUPERFAMILY SSF46689 12 85 3.11E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14455 4bf36bf55007ffa00a6d9bc7e53314ea 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 198 5.1E-7 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS14455 4bf36bf55007ffa00a6d9bc7e53314ea 230 SUPERFAMILY SSF56784 4 227 4.39E-31 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS14455 4bf36bf55007ffa00a6d9bc7e53314ea 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 157 2.5E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS14455 4bf36bf55007ffa00a6d9bc7e53314ea 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 2.5E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS14455 4bf36bf55007ffa00a6d9bc7e53314ea 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.5E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS14455 4bf36bf55007ffa00a6d9bc7e53314ea 230 Gene3D G3DSA:3.40.50.1000 3 223 8.8E-25 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS14455 4bf36bf55007ffa00a6d9bc7e53314ea 230 PANTHER PTHR12725 1 230 2.4E-19 T 13-09-2016 PMA3_RS00615 1e794ac8b9c0762b9b7e0ab339cca2d1 309 Gene3D G3DSA:3.40.50.300 29 199 5.4E-45 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00615 1e794ac8b9c0762b9b7e0ab339cca2d1 309 SUPERFAMILY SSF52540 29 268 1.69E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00615 1e794ac8b9c0762b9b7e0ab339cca2d1 309 Pfam PF00158 Sigma-54 interaction domain 32 192 1.6E-53 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS00615 1e794ac8b9c0762b9b7e0ab339cca2d1 309 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 52 65 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS00615 1e794ac8b9c0762b9b7e0ab339cca2d1 309 Gene3D G3DSA:1.10.8.60 200 271 2.0E-21 T 13-09-2016 PMA3_RS00615 1e794ac8b9c0762b9b7e0ab339cca2d1 309 SMART SM00382 48 190 3.1E-7 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS00615 1e794ac8b9c0762b9b7e0ab339cca2d1 309 PANTHER PTHR32071 28 270 7.8E-104 T 13-09-2016 PMA3_RS00615 1e794ac8b9c0762b9b7e0ab339cca2d1 309 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 113 128 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS04915 64ee7cef54ebfb54b77c069732dd9c56 543 Gene3D G3DSA:3.40.50.300 1 280 9.0E-133 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04915 64ee7cef54ebfb54b77c069732dd9c56 543 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 2.8E-251 T 13-09-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PMA3_RS04915 64ee7cef54ebfb54b77c069732dd9c56 543 PANTHER PTHR11550 1 536 0.0 T 13-09-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PMA3_RS04915 64ee7cef54ebfb54b77c069732dd9c56 543 Pfam PF06418 CTP synthase N-terminus 3 265 1.0E-124 T 13-09-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PMA3_RS04915 64ee7cef54ebfb54b77c069732dd9c56 543 SUPERFAMILY SSF52540 1 266 1.18E-120 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04915 64ee7cef54ebfb54b77c069732dd9c56 543 Pfam PF00117 Glutamine amidotransferase class-I 300 534 3.6E-59 T 13-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PMA3_RS04915 64ee7cef54ebfb54b77c069732dd9c56 543 Gene3D G3DSA:3.40.50.880 286 540 6.8E-98 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS04915 64ee7cef54ebfb54b77c069732dd9c56 543 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.021 T 13-09-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PMA3_RS04915 64ee7cef54ebfb54b77c069732dd9c56 543 SUPERFAMILY SSF52317 287 536 4.29E-88 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS25635 efeec50957872e1be9f5e7d0f6951c40 274 PANTHER PTHR30296 32 274 1.2E-76 T 13-09-2016 PMA3_RS25635 efeec50957872e1be9f5e7d0f6951c40 274 PANTHER PTHR30296:SF0 32 274 1.2E-76 T 13-09-2016 PMA3_RS25635 efeec50957872e1be9f5e7d0f6951c40 274 Pfam PF02754 Cysteine-rich domain 162 246 4.9E-11 T 13-09-2016 IPR004017 Cysteine-rich domain PMA3_RS25635 efeec50957872e1be9f5e7d0f6951c40 274 Pfam PF02754 Cysteine-rich domain 34 114 1.6E-12 T 13-09-2016 IPR004017 Cysteine-rich domain PMA3_RS28645 de70e6c74a629ed3d46cd4d45087af86 289 PANTHER PTHR33525 2 213 5.1E-51 T 13-09-2016 PMA3_RS28645 de70e6c74a629ed3d46cd4d45087af86 289 SUPERFAMILY SSF109604 2 282 1.37E-63 T 13-09-2016 PMA3_RS28645 de70e6c74a629ed3d46cd4d45087af86 289 Pfam PF08668 HDOD domain 20 213 1.5E-53 T 13-09-2016 IPR013976 Metal-dependent hydrolase HDOD PMA3_RS28645 de70e6c74a629ed3d46cd4d45087af86 289 PANTHER PTHR33525:SF3 2 213 5.1E-51 T 13-09-2016 PMA3_RS28645 de70e6c74a629ed3d46cd4d45087af86 289 Gene3D G3DSA:1.10.3150.10 2 283 1.6E-72 T 13-09-2016 IPR013976 Metal-dependent hydrolase HDOD PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 SUPERFAMILY SSF52172 247 378 8.97E-30 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 PANTHER PTHR10799:SF710 265 547 2.1E-29 T 13-09-2016 PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 536 1.1E-45 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 Pfam PF00072 Response regulator receiver domain 251 362 2.5E-21 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 Gene3D G3DSA:3.40.50.2300 135 240 7.8E-4 T 13-09-2016 PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 Gene3D G3DSA:3.40.50.2300 247 373 3.1E-27 T 13-09-2016 PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 PANTHER PTHR10799 265 547 2.1E-29 T 13-09-2016 PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 Gene3D G3DSA:3.30.70.270 378 537 1.1E-48 T 13-09-2016 PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 SMART SM00448 249 362 2.8E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 SMART SM00267 365 536 6.7E-54 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 Pfam PF00990 Diguanylate cyclase, GGDEF domain 378 532 1.2E-40 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS02585 460284889290fc1e1be6fb61180c9349 556 SUPERFAMILY SSF55073 381 534 6.67E-46 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS07785 b81464db73ddeacfebde9bd85003fc4c 390 SUPERFAMILY SSF52151 5 282 6.54E-46 T 13-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PMA3_RS07785 b81464db73ddeacfebde9bd85003fc4c 390 Gene3D G3DSA:3.40.1090.10 5 222 1.9E-14 T 13-09-2016 PMA3_RS07785 b81464db73ddeacfebde9bd85003fc4c 390 Pfam PF01734 Patatin-like phospholipase 10 222 8.0E-20 T 13-09-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PMA3_RS07785 b81464db73ddeacfebde9bd85003fc4c 390 PANTHER PTHR14226:SF34 180 335 2.5E-102 T 13-09-2016 PMA3_RS07785 b81464db73ddeacfebde9bd85003fc4c 390 PANTHER PTHR14226:SF34 6 162 2.5E-102 T 13-09-2016 PMA3_RS07785 b81464db73ddeacfebde9bd85003fc4c 390 PANTHER PTHR14226 180 335 2.5E-102 T 13-09-2016 PMA3_RS07785 b81464db73ddeacfebde9bd85003fc4c 390 PANTHER PTHR14226 6 162 2.5E-102 T 13-09-2016 PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 PANTHER PTHR32494:SF6 1 424 8.6E-272 T 13-09-2016 PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 PIRSF PIRSF001235 13 420 5.2E-133 T 13-09-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 Pfam PF01546 Peptidase family M20/M25/M40 88 414 3.0E-39 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 18 414 4.0E-134 T 13-09-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 Gene3D G3DSA:3.40.630.10 13 233 4.4E-114 T 13-09-2016 PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 Gene3D G3DSA:3.40.630.10 359 416 4.4E-114 T 13-09-2016 PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 SUPERFAMILY SSF55031 221 336 8.07E-30 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 PANTHER PTHR32494 1 424 8.6E-272 T 13-09-2016 PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 SUPERFAMILY SSF53187 344 414 1.23E-98 T 13-09-2016 PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 SUPERFAMILY SSF53187 5 231 1.23E-98 T 13-09-2016 PMA3_RS15560 d3035adfc805826e6583241fda3babd9 427 Gene3D G3DSA:3.30.70.360 234 337 3.8E-36 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS05945 80fd2944035bf001131f2bf83d1a69a5 300 TIGRFAM TIGR01138 cysM: cysteine synthase B 7 296 9.6E-161 T 13-09-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PMA3_RS05945 80fd2944035bf001131f2bf83d1a69a5 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 296 3.6E-123 T 13-09-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PMA3_RS05945 80fd2944035bf001131f2bf83d1a69a5 300 SUPERFAMILY SSF53686 5 293 7.6E-90 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS05945 80fd2944035bf001131f2bf83d1a69a5 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 285 6.5E-67 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS05945 80fd2944035bf001131f2bf83d1a69a5 300 Gene3D G3DSA:3.40.50.1100 44 143 6.6E-37 T 13-09-2016 PMA3_RS05945 80fd2944035bf001131f2bf83d1a69a5 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 13-09-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PMA3_RS05945 80fd2944035bf001131f2bf83d1a69a5 300 Gene3D G3DSA:3.40.50.1100 4 43 5.7E-82 T 13-09-2016 PMA3_RS05945 80fd2944035bf001131f2bf83d1a69a5 300 Gene3D G3DSA:3.40.50.1100 150 297 5.7E-82 T 13-09-2016 PMA3_RS05945 80fd2944035bf001131f2bf83d1a69a5 300 PANTHER PTHR10314 1 297 2.4E-184 T 13-09-2016 PMA3_RS05945 80fd2944035bf001131f2bf83d1a69a5 300 PANTHER PTHR10314:SF100 1 297 2.4E-184 T 13-09-2016 PMA3_RS16115 7a78af5e628e416839c48e64a48f123f 859 Pfam PF13166 AAA domain 566 701 3.0E-12 T 13-09-2016 IPR026866 P-loop containing protein CR006/PrrC PMA3_RS16115 7a78af5e628e416839c48e64a48f123f 859 SUPERFAMILY SSF52540 90 157 5.68E-18 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16115 7a78af5e628e416839c48e64a48f123f 859 SUPERFAMILY SSF52540 589 687 5.68E-18 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16115 7a78af5e628e416839c48e64a48f123f 859 Gene3D G3DSA:3.40.50.300 598 689 2.2E-20 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16115 7a78af5e628e416839c48e64a48f123f 859 Gene3D G3DSA:3.40.50.300 89 273 2.2E-20 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07395 fab2861a68d4860c7af58a8414930b21 332 SUPERFAMILY SSF51735 122 300 1.54E-38 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS07395 fab2861a68d4860c7af58a8414930b21 332 SMART SM00829 14 330 5.3E-39 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS07395 fab2861a68d4860c7af58a8414930b21 332 PANTHER PTHR11695:SF294 19 332 3.4E-92 T 13-09-2016 PMA3_RS07395 fab2861a68d4860c7af58a8414930b21 332 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 13-09-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PMA3_RS07395 fab2861a68d4860c7af58a8414930b21 332 Gene3D G3DSA:3.40.50.720 156 252 6.9E-25 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS07395 fab2861a68d4860c7af58a8414930b21 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 92 8.0E-10 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS07395 fab2861a68d4860c7af58a8414930b21 332 SUPERFAMILY SSF50129 5 154 2.74E-40 T 13-09-2016 IPR011032 GroES-like PMA3_RS07395 fab2861a68d4860c7af58a8414930b21 332 Pfam PF13602 Zinc-binding dehydrogenase 196 330 8.1E-19 T 13-09-2016 PMA3_RS07395 fab2861a68d4860c7af58a8414930b21 332 Gene3D G3DSA:3.90.180.10 6 155 5.1E-49 T 13-09-2016 IPR011032 GroES-like PMA3_RS07395 fab2861a68d4860c7af58a8414930b21 332 PANTHER PTHR11695 19 332 3.4E-92 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS19530 a3e1d3b2d6687baf6542e34db34da25f 97 SUPERFAMILY SSF75169 3 96 7.51E-24 T 13-09-2016 IPR027396 DsrEFH-like PMA3_RS19530 a3e1d3b2d6687baf6542e34db34da25f 97 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 4 96 2.1E-27 T 13-09-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 PMA3_RS19530 a3e1d3b2d6687baf6542e34db34da25f 97 Pfam PF04077 DsrH like protein 9 93 7.6E-22 T 13-09-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 PMA3_RS19530 a3e1d3b2d6687baf6542e34db34da25f 97 PANTHER PTHR37526 3 96 5.3E-21 T 13-09-2016 PMA3_RS19530 a3e1d3b2d6687baf6542e34db34da25f 97 Gene3D G3DSA:3.40.1260.10 4 93 1.5E-17 T 13-09-2016 IPR027396 DsrEFH-like PMA3_RS25610 f7e97f2133e5b8cb5cea883709d6ed15 144 PANTHER PTHR12901:SF7 3 144 3.1E-70 T 13-09-2016 PMA3_RS25610 f7e97f2133e5b8cb5cea883709d6ed15 144 SUPERFAMILY SSF55961 1 144 2.95E-35 T 13-09-2016 PMA3_RS25610 f7e97f2133e5b8cb5cea883709d6ed15 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 135 1.6E-33 T 13-09-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain PMA3_RS25610 f7e97f2133e5b8cb5cea883709d6ed15 144 Gene3D G3DSA:3.30.530.20 4 144 2.3E-46 T 13-09-2016 IPR023393 START-like domain PMA3_RS25610 f7e97f2133e5b8cb5cea883709d6ed15 144 PANTHER PTHR12901 3 144 3.1E-70 T 13-09-2016 PMA3_RS05035 af3d2e10c0d5d7816ac353df6b80aedc 120 PANTHER PTHR34299 1 120 2.0E-36 T 13-09-2016 PMA3_RS05035 af3d2e10c0d5d7816ac353df6b80aedc 120 PANTHER PTHR34299:SF1 1 120 2.0E-36 T 13-09-2016 PMA3_RS05035 af3d2e10c0d5d7816ac353df6b80aedc 120 Pfam PF01219 Prokaryotic diacylglycerol kinase 18 119 8.3E-33 T 13-09-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 PMA3_RS05035 af3d2e10c0d5d7816ac353df6b80aedc 120 Gene3D G3DSA:1.10.3830.10 5 120 1.9E-42 T 13-09-2016 PMA3_RS25930 f59838b5572c4a390478c569623c2739 497 Gene3D G3DSA:3.40.309.10 260 442 1.1E-64 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS25930 f59838b5572c4a390478c569623c2739 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS25930 f59838b5572c4a390478c569623c2739 497 PANTHER PTHR11699 4 483 0.0 T 13-09-2016 PMA3_RS25930 f59838b5572c4a390478c569623c2739 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 3.1E-207 T 13-09-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 PMA3_RS25930 f59838b5572c4a390478c569623c2739 497 PANTHER PTHR11699:SF188 4 483 0.0 T 13-09-2016 PMA3_RS25930 f59838b5572c4a390478c569623c2739 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 3.0E-138 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS25930 f59838b5572c4a390478c569623c2739 497 SUPERFAMILY SSF53720 3 483 4.19E-148 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS25930 f59838b5572c4a390478c569623c2739 497 Gene3D G3DSA:3.40.605.10 4 259 5.3E-89 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS20075 5151d350b53fd41699cc082e4eb7a923 208 PANTHER PTHR14119 5 202 3.2E-119 T 13-09-2016 PMA3_RS20075 5151d350b53fd41699cc082e4eb7a923 208 Pfam PF00857 Isochorismatase family 14 165 5.2E-22 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS20075 5151d350b53fd41699cc082e4eb7a923 208 SUPERFAMILY SSF52499 5 201 7.72E-53 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS20075 5151d350b53fd41699cc082e4eb7a923 208 PANTHER PTHR14119:SF11 5 202 3.2E-119 T 13-09-2016 PMA3_RS20075 5151d350b53fd41699cc082e4eb7a923 208 Gene3D G3DSA:3.40.50.850 4 203 1.9E-48 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS03045 f47b5ee51ee85c3b019db2deddf08013 144 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 133 1.7E-46 T 13-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PMA3_RS03045 f47b5ee51ee85c3b019db2deddf08013 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 1.2E-12 T 13-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PMA3_RS03045 f47b5ee51ee85c3b019db2deddf08013 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 1.2E-12 T 13-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PMA3_RS03045 f47b5ee51ee85c3b019db2deddf08013 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.2E-12 T 13-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PMA3_RS03045 f47b5ee51ee85c3b019db2deddf08013 144 PANTHER PTHR30266:SF2 1 140 1.8E-56 T 13-09-2016 PMA3_RS03045 f47b5ee51ee85c3b019db2deddf08013 144 SUPERFAMILY SSF81330 13 127 6.28E-35 T 13-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PMA3_RS03045 f47b5ee51ee85c3b019db2deddf08013 144 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 13-09-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site PMA3_RS03045 f47b5ee51ee85c3b019db2deddf08013 144 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 131 3.1E-43 T 13-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PMA3_RS03045 f47b5ee51ee85c3b019db2deddf08013 144 PANTHER PTHR30266 1 140 1.8E-56 T 13-09-2016 PMA3_RS03045 f47b5ee51ee85c3b019db2deddf08013 144 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 29.143 T 13-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PMA3_RS25250 50b0f0e9ee2306747f5a534070ce16ab 455 PANTHER PTHR11662:SF18 5 455 2.6E-230 T 13-09-2016 PMA3_RS25250 50b0f0e9ee2306747f5a534070ce16ab 455 Gene3D G3DSA:1.20.1250.20 237 428 9.2E-36 T 13-09-2016 PMA3_RS25250 50b0f0e9ee2306747f5a534070ce16ab 455 PIRSF PIRSF002808 1 439 8.1E-45 T 13-09-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS25250 50b0f0e9ee2306747f5a534070ce16ab 455 Pfam PF07690 Major Facilitator Superfamily 17 307 2.1E-50 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS25250 50b0f0e9ee2306747f5a534070ce16ab 455 SUPERFAMILY SSF103473 4 436 5.1E-83 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS25250 50b0f0e9ee2306747f5a534070ce16ab 455 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 19 428 2.7E-158 T 13-09-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS25250 50b0f0e9ee2306747f5a534070ce16ab 455 PANTHER PTHR11662 5 455 2.6E-230 T 13-09-2016 PMA3_RS25250 50b0f0e9ee2306747f5a534070ce16ab 455 Gene3D G3DSA:1.20.1250.20 4 206 1.9E-47 T 13-09-2016 PMA3_RS12400 011fb12f70567ab5939b2e283ad903a7 622 Gene3D G3DSA:3.10.105.10 331 568 1.0E-45 T 13-09-2016 PMA3_RS12400 011fb12f70567ab5939b2e283ad903a7 622 Gene3D G3DSA:3.40.190.10 219 330 2.8E-22 T 13-09-2016 PMA3_RS12400 011fb12f70567ab5939b2e283ad903a7 622 PANTHER PTHR30290 388 608 4.7E-166 T 13-09-2016 PMA3_RS12400 011fb12f70567ab5939b2e283ad903a7 622 PANTHER PTHR30290 1 363 4.7E-166 T 13-09-2016 PMA3_RS12400 011fb12f70567ab5939b2e283ad903a7 622 SUPERFAMILY SSF53850 53 597 4.75E-110 T 13-09-2016 PMA3_RS12400 011fb12f70567ab5939b2e283ad903a7 622 Gene3D G3DSA:3.90.76.10 70 218 1.5E-32 T 13-09-2016 PMA3_RS12400 011fb12f70567ab5939b2e283ad903a7 622 PIRSF PIRSF002741 3 600 1.2E-90 T 13-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PMA3_RS12400 011fb12f70567ab5939b2e283ad903a7 622 PANTHER PTHR30290:SF2 388 608 4.7E-166 T 13-09-2016 PMA3_RS12400 011fb12f70567ab5939b2e283ad903a7 622 PANTHER PTHR30290:SF2 1 363 4.7E-166 T 13-09-2016 PMA3_RS12400 011fb12f70567ab5939b2e283ad903a7 622 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 104 511 1.9E-73 T 13-09-2016 IPR000914 Solute-binding protein family 5 domain PMA3_RS28975 b5c72102b3092439560f60ea424c203a 455 SUPERFAMILY SSF55154 1 214 2.45E-40 T 13-09-2016 IPR033469 CYTH-like domain PMA3_RS28975 b5c72102b3092439560f60ea424c203a 455 PANTHER PTHR39569 2 454 6.1E-107 T 13-09-2016 PMA3_RS28975 b5c72102b3092439560f60ea424c203a 455 PANTHER PTHR39569:SF1 2 454 6.1E-107 T 13-09-2016 PMA3_RS28975 b5c72102b3092439560f60ea424c203a 455 Gene3D G3DSA:2.40.320.10 1 208 9.8E-30 T 13-09-2016 IPR023577 CYTH domain PMA3_RS28975 b5c72102b3092439560f60ea424c203a 455 SMART SM01118 2 207 2.9E-32 T 13-09-2016 IPR023577 CYTH domain PMA3_RS28975 b5c72102b3092439560f60ea424c203a 455 Pfam PF01928 CYTH domain 3 201 3.7E-34 T 13-09-2016 IPR023577 CYTH domain PMA3_RS28510 2a61eae9cf1046fe676f71864fdc791b 401 Pfam PF06969 HemN C-terminal domain 326 389 6.8E-10 T 13-09-2016 IPR010723 HemN, C-terminal PMA3_RS28510 2a61eae9cf1046fe676f71864fdc791b 401 Gene3D G3DSA:3.80.30.20 30 260 5.8E-34 T 13-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe PMA3_RS28510 2a61eae9cf1046fe676f71864fdc791b 401 SUPERFAMILY SSF102114 27 400 7.59E-110 T 13-09-2016 PMA3_RS28510 2a61eae9cf1046fe676f71864fdc791b 401 PANTHER PTHR13932:SF7 27 401 7.0E-202 T 13-09-2016 PMA3_RS28510 2a61eae9cf1046fe676f71864fdc791b 401 PANTHER PTHR13932 27 401 7.0E-202 T 13-09-2016 PMA3_RS28510 2a61eae9cf1046fe676f71864fdc791b 401 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 30 375 4.7E-121 T 13-09-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- PMA3_RS28510 2a61eae9cf1046fe676f71864fdc791b 401 Pfam PF04055 Radical SAM superfamily 33 197 8.0E-19 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS28510 2a61eae9cf1046fe676f71864fdc791b 401 SMART SM00729 28 244 6.6E-57 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS05465 59c51405e721e85ca0987c6ad5f1335e 161 Pfam PF00583 Acetyltransferase (GNAT) family 59 140 9.0E-11 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS05465 59c51405e721e85ca0987c6ad5f1335e 161 Gene3D G3DSA:3.40.630.30 34 147 3.8E-19 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS05465 59c51405e721e85ca0987c6ad5f1335e 161 SUPERFAMILY SSF55729 48 157 8.33E-20 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS15455 3e8075b9ee19bf9d62d94e72dd63f953 151 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 62 8.0E-9 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS15455 3e8075b9ee19bf9d62d94e72dd63f953 151 PANTHER PTHR11908 1 134 3.3E-33 T 13-09-2016 PMA3_RS15455 3e8075b9ee19bf9d62d94e72dd63f953 151 Pfam PF01799 [2Fe-2S] binding domain 73 145 2.6E-29 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS15455 3e8075b9ee19bf9d62d94e72dd63f953 151 Gene3D G3DSA:3.10.20.30 2 74 2.0E-28 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS15455 3e8075b9ee19bf9d62d94e72dd63f953 151 SUPERFAMILY SSF54292 3 97 3.41E-25 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS15455 3e8075b9ee19bf9d62d94e72dd63f953 151 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS15455 3e8075b9ee19bf9d62d94e72dd63f953 151 Gene3D G3DSA:1.10.150.120 75 149 7.5E-32 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS15455 3e8075b9ee19bf9d62d94e72dd63f953 151 PANTHER PTHR11908:SF66 1 134 3.3E-33 T 13-09-2016 PMA3_RS15455 3e8075b9ee19bf9d62d94e72dd63f953 151 SUPERFAMILY SSF47741 73 149 5.89E-32 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS05665 42697b557240e3f6db0d6166fd8dbbc8 334 PIRSF PIRSF017617 1 334 4.3E-132 T 13-09-2016 IPR023603 Threonine aldolase PMA3_RS05665 42697b557240e3f6db0d6166fd8dbbc8 334 Gene3D G3DSA:3.40.640.10 2 247 3.4E-84 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS05665 42697b557240e3f6db0d6166fd8dbbc8 334 SUPERFAMILY SSF53383 4 332 5.91E-112 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS05665 42697b557240e3f6db0d6166fd8dbbc8 334 Gene3D G3DSA:3.90.1150.10 248 331 7.9E-24 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS05665 42697b557240e3f6db0d6166fd8dbbc8 334 PANTHER PTHR10289 3 331 1.5E-155 T 13-09-2016 PMA3_RS05665 42697b557240e3f6db0d6166fd8dbbc8 334 Pfam PF01212 Beta-eliminating lyase 5 284 1.1E-91 T 13-09-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 PMA3_RS05665 42697b557240e3f6db0d6166fd8dbbc8 334 PANTHER PTHR10289:SF5 3 331 1.5E-155 T 13-09-2016 PMA3_RS17105 fd7681a205270ed28804e9b441068de0 173 SUPERFAMILY SSF49329 25 173 6.81E-48 T 13-09-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS17105 fd7681a205270ed28804e9b441068de0 173 PANTHER PTHR10003:SF40 1 173 1.3E-52 T 13-09-2016 PMA3_RS17105 fd7681a205270ed28804e9b441068de0 173 Gene3D G3DSA:2.60.40.200 25 173 5.5E-46 T 13-09-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS17105 fd7681a205270ed28804e9b441068de0 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 36 173 1.2E-31 T 13-09-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS17105 fd7681a205270ed28804e9b441068de0 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 162 173 - T 13-09-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 PMA3_RS17105 fd7681a205270ed28804e9b441068de0 173 PANTHER PTHR10003 1 173 1.3E-52 T 13-09-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 PMA3_RS17105 fd7681a205270ed28804e9b441068de0 173 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 66 76 - T 13-09-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 PMA3_RS09110 f7884a0bab29c8d6d4a9684124002e08 169 SUPERFAMILY SSF88946 10 101 6.28E-14 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS09110 f7884a0bab29c8d6d4a9684124002e08 169 Pfam PF08281 Sigma-70, region 4 111 164 8.1E-16 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS09110 f7884a0bab29c8d6d4a9684124002e08 169 Gene3D G3DSA:1.10.1740.10 7 81 1.9E-12 T 13-09-2016 PMA3_RS09110 f7884a0bab29c8d6d4a9684124002e08 169 SUPERFAMILY SSF88659 106 164 2.35E-13 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS09110 f7884a0bab29c8d6d4a9684124002e08 169 Pfam PF04542 Sigma-70 region 2 15 81 6.6E-12 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS09110 f7884a0bab29c8d6d4a9684124002e08 169 PANTHER PTHR30173 10 164 4.6E-35 T 13-09-2016 PMA3_RS09110 f7884a0bab29c8d6d4a9684124002e08 169 Gene3D G3DSA:1.10.10.10 109 164 3.3E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09110 f7884a0bab29c8d6d4a9684124002e08 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 164 2.9E-20 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS09110 f7884a0bab29c8d6d4a9684124002e08 169 PANTHER PTHR30173:SF9 10 164 4.6E-35 T 13-09-2016 PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 Gene3D G3DSA:1.10.40.30 371 442 1.5E-27 T 13-09-2016 PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 Gene3D G3DSA:1.10.275.10 5 103 6.0E-36 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 PANTHER PTHR11444 1 446 5.2E-204 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 Pfam PF00206 Lyase 19 297 6.4E-51 T 13-09-2016 IPR022761 Fumarate lyase, N-terminal PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 PRINTS PR00149 Fumarate lyase superfamily signature 101 119 1.4E-24 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 1.4E-24 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 1.4E-24 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.4E-24 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 Gene3D G3DSA:1.20.200.10 104 370 2.9E-88 T 13-09-2016 PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 PRINTS PR00145 Argininosuccinate lyase family signature 141 161 4.4E-10 T 13-09-2016 PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 4.4E-10 T 13-09-2016 PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 4.4E-10 T 13-09-2016 PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 SUPERFAMILY SSF48557 10 444 3.14E-121 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 PANTHER PTHR11444:SF21 1 446 5.2E-204 T 13-09-2016 PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 Pfam PF10397 Adenylosuccinate lyase C-terminus 365 440 2.6E-18 T 13-09-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PMA3_RS10125 1f3eb9b2fec2a5b5101655ea92737c1c 451 SMART SM00998 364 443 1.7E-25 T 13-09-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PMA3_RS29500 5bc1c96de5ffb081cd1b6fb3eeb38aa9 224 SUPERFAMILY SSF47781 15 90 2.89E-8 T 13-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PMA3_RS29500 5bc1c96de5ffb081cd1b6fb3eeb38aa9 224 SUPERFAMILY SSF102712 114 194 2.35E-6 T 13-09-2016 PMA3_RS29500 5bc1c96de5ffb081cd1b6fb3eeb38aa9 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 13-09-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site PMA3_RS29500 5bc1c96de5ffb081cd1b6fb3eeb38aa9 224 PANTHER PTHR30471:SF5 1 224 5.0E-130 T 13-09-2016 PMA3_RS29500 5bc1c96de5ffb081cd1b6fb3eeb38aa9 224 Gene3D G3DSA:3.40.140.10 100 224 1.2E-51 T 13-09-2016 PMA3_RS29500 5bc1c96de5ffb081cd1b6fb3eeb38aa9 224 PANTHER PTHR30471 1 224 5.0E-130 T 13-09-2016 PMA3_RS29500 5bc1c96de5ffb081cd1b6fb3eeb38aa9 224 Pfam PF04002 RadC-like JAB domain 104 222 2.0E-45 T 13-09-2016 IPR025657 RadC-like JAB domain PMA3_RS29500 5bc1c96de5ffb081cd1b6fb3eeb38aa9 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.2E-75 T 13-09-2016 IPR001405 RadC protein PMA3_RS09910 74d22252e1eee5390c81a4a33af9676f 139 PANTHER PTHR30574 10 137 1.3E-29 T 13-09-2016 PMA3_RS09910 74d22252e1eee5390c81a4a33af9676f 139 PANTHER PTHR30574:SF1 10 137 1.3E-29 T 13-09-2016 PMA3_RS11845 8a01a66c6d1b5f3a4d3205e9e4e839f3 352 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 3.6E-11 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11845 8a01a66c6d1b5f3a4d3205e9e4e839f3 352 Gene3D G3DSA:1.10.540.10 1 120 4.7E-16 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11845 8a01a66c6d1b5f3a4d3205e9e4e839f3 352 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 190 320 2.5E-25 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11845 8a01a66c6d1b5f3a4d3205e9e4e839f3 352 PANTHER PTHR10909 1 316 1.3E-40 T 13-09-2016 PMA3_RS11845 8a01a66c6d1b5f3a4d3205e9e4e839f3 352 SUPERFAMILY SSF56645 1 149 2.36E-17 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS11845 8a01a66c6d1b5f3a4d3205e9e4e839f3 352 PANTHER PTHR10909:SF302 1 316 1.3E-40 T 13-09-2016 PMA3_RS11845 8a01a66c6d1b5f3a4d3205e9e4e839f3 352 SUPERFAMILY SSF47203 191 337 2.58E-36 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11845 8a01a66c6d1b5f3a4d3205e9e4e839f3 352 Gene3D G3DSA:1.20.140.10 195 332 6.3E-33 T 13-09-2016 PMA3_RS21170 d7dd04b11656278285ce52396b596445 352 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 2.3E-143 T 13-09-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS21170 d7dd04b11656278285ce52396b596445 352 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 346 45.927 T 13-09-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PMA3_RS21170 d7dd04b11656278285ce52396b596445 352 SUPERFAMILY SSF56042 171 342 7.63E-61 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS21170 d7dd04b11656278285ce52396b596445 352 Gene3D G3DSA:3.30.1330.10 22 170 1.6E-61 T 13-09-2016 IPR016188 PurM-like, N-terminal domain PMA3_RS21170 d7dd04b11656278285ce52396b596445 352 SUPERFAMILY SSF55326 7 170 3.89E-52 T 13-09-2016 PMA3_RS21170 d7dd04b11656278285ce52396b596445 352 PANTHER PTHR10520 7 349 1.6E-215 T 13-09-2016 PMA3_RS21170 d7dd04b11656278285ce52396b596445 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 164 4.2E-15 T 13-09-2016 IPR016188 PurM-like, N-terminal domain PMA3_RS21170 d7dd04b11656278285ce52396b596445 352 Gene3D G3DSA:3.90.650.10 171 344 1.5E-65 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS21170 d7dd04b11656278285ce52396b596445 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 344 2.1E-38 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 PANTHER PTHR11751 150 491 1.9E-198 T 13-09-2016 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 SUPERFAMILY SSF53383 149 599 2.49E-111 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 PANTHER PTHR11751:SF406 519 527 1.9E-198 T 13-09-2016 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 582 2.4E-157 T 13-09-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 SUPERFAMILY SSF55904 606 751 4.58E-42 T 13-09-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 388 402 - T 13-09-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 PANTHER PTHR11751:SF406 544 667 1.9E-198 T 13-09-2016 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 Gene3D G3DSA:3.90.100.10 625 749 2.4E-33 T 13-09-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 Gene3D G3DSA:3.40.640.10 149 452 8.2E-112 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 Gene3D G3DSA:3.90.1150.10 456 624 1.4E-59 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 22 143 1.3E-25 T 13-09-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 PIRSF PIRSF009393 3 751 3.8E-282 T 13-09-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 PANTHER PTHR11751 519 527 1.9E-198 T 13-09-2016 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 607 737 2.3E-48 T 13-09-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 PANTHER PTHR11751 544 667 1.9E-198 T 13-09-2016 PMA3_RS15370 3e3ce4a3ab38e97af15e133eeaa29b38 751 PANTHER PTHR11751:SF406 150 491 1.9E-198 T 13-09-2016 PMA3_RS17915 2b23584f935adbfd0d339bd836145028 380 Gene3D G3DSA:3.30.9.10 222 311 7.1E-6 T 13-09-2016 PMA3_RS17915 2b23584f935adbfd0d339bd836145028 380 Gene3D G3DSA:3.50.50.60 315 370 5.6E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17915 2b23584f935adbfd0d339bd836145028 380 Gene3D G3DSA:3.50.50.60 151 221 5.6E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17915 2b23584f935adbfd0d339bd836145028 380 Gene3D G3DSA:3.50.50.60 9 90 5.6E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17915 2b23584f935adbfd0d339bd836145028 380 PANTHER PTHR13847:SF180 10 373 1.8E-46 T 13-09-2016 PMA3_RS17915 2b23584f935adbfd0d339bd836145028 380 PANTHER PTHR13847 10 373 1.8E-46 T 13-09-2016 PMA3_RS17915 2b23584f935adbfd0d339bd836145028 380 Pfam PF01266 FAD dependent oxidoreductase 12 350 6.5E-47 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS17915 2b23584f935adbfd0d339bd836145028 380 SUPERFAMILY SSF51905 315 372 3.41E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17915 2b23584f935adbfd0d339bd836145028 380 SUPERFAMILY SSF51905 11 232 3.41E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17915 2b23584f935adbfd0d339bd836145028 380 SUPERFAMILY SSF54373 232 315 1.96E-11 T 13-09-2016 PMA3_RS22525 166ba66ea810d2c6acaa437ef0bdbc29 477 Pfam PF01435 Peptidase family M48 63 250 5.0E-31 T 13-09-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PMA3_RS22525 166ba66ea810d2c6acaa437ef0bdbc29 477 SUPERFAMILY SSF48452 294 447 3.16E-12 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS22525 166ba66ea810d2c6acaa437ef0bdbc29 477 Pfam PF14559 Tetratricopeptide repeat 285 332 1.8E-8 T 13-09-2016 PMA3_RS22525 166ba66ea810d2c6acaa437ef0bdbc29 477 Pfam PF14559 Tetratricopeptide repeat 346 408 6.1E-7 T 13-09-2016 PMA3_RS22525 166ba66ea810d2c6acaa437ef0bdbc29 477 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 473 31.924 T 13-09-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 PMA3_RS22525 166ba66ea810d2c6acaa437ef0bdbc29 477 Gene3D G3DSA:1.25.40.10 287 445 5.0E-15 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS22525 166ba66ea810d2c6acaa437ef0bdbc29 477 PANTHER PTHR22726:SF10 1 345 1.2E-115 T 13-09-2016 PMA3_RS22525 166ba66ea810d2c6acaa437ef0bdbc29 477 Gene3D G3DSA:3.30.2010.10 58 142 3.0E-17 T 13-09-2016 PMA3_RS22525 166ba66ea810d2c6acaa437ef0bdbc29 477 PANTHER PTHR22726 1 345 1.2E-115 T 13-09-2016 PMA3_RS29330 3bfedf47d624c155c88dc26f31493c25 84 Pfam PF04380 Membrane fusogenic activity 5 79 7.4E-25 T 13-09-2016 IPR007475 Membrane fusogenic activity PMA3_RS29330 3bfedf47d624c155c88dc26f31493c25 84 PANTHER PTHR38040:SF1 2 84 3.1E-31 T 13-09-2016 PMA3_RS29330 3bfedf47d624c155c88dc26f31493c25 84 PANTHER PTHR38040 2 84 3.1E-31 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 Gene3D G3DSA:3.30.70.1430 567 668 3.2E-31 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 SUPERFAMILY SSF82693 134 181 3.4E-25 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 SUPERFAMILY SSF82693 273 329 3.4E-25 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 SUPERFAMILY SSF82866 295 496 5.36E-49 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 SUPERFAMILY SSF82714 181 271 1.24E-21 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 SUPERFAMILY SSF82714 719 804 3.01E-20 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 Gene3D G3DSA:3.30.70.1430 38 137 3.0E-29 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PANTHER PTHR32063 1 1031 0.0 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 13-09-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 Gene3D G3DSA:1.10.3850.10 278 497 4.4E-60 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 Gene3D G3DSA:1.10.3850.10 811 1024 6.4E-54 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 SUPERFAMILY SSF82866 802 1026 1.44E-42 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 SUPERFAMILY SSF82693 38 131 1.28E-23 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 SUPERFAMILY SSF82693 565 668 4.6E-28 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PANTHER PTHR32063:SF10 1 1031 0.0 T 13-09-2016 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 Gene3D G3DSA:3.30.2090.10 180 274 5.0E-26 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 Gene3D G3DSA:3.30.2090.10 719 807 8.0E-23 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 1.3E-102 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 1.3E-102 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.3E-102 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.3E-102 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 1.3E-102 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 1.3E-102 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.3E-102 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.3E-102 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS15810 64111fe537495b40590d1e8cc35b719d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.3E-102 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS17970 1808dd9322202713a57f09959a00a1f4 296 Pfam PF11453 Protein of unknown function (DUF2950) 23 290 4.2E-105 T 13-09-2016 IPR021556 Protein of unknown function DUF2950 PMA3_RS03870 5bab0430b78c0074dfe3bb4b2ff81617 502 Gene3D G3DSA:3.50.50.60 148 333 5.7E-22 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03870 5bab0430b78c0074dfe3bb4b2ff81617 502 Gene3D G3DSA:3.50.50.60 5 73 5.7E-22 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03870 5bab0430b78c0074dfe3bb4b2ff81617 502 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 3 491 50.712 T 13-09-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PMA3_RS03870 5bab0430b78c0074dfe3bb4b2ff81617 502 SUPERFAMILY SSF51905 5 324 2.12E-22 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03870 5bab0430b78c0074dfe3bb4b2ff81617 502 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 7 483 2.0E-237 T 13-09-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PMA3_RS03870 5bab0430b78c0074dfe3bb4b2ff81617 502 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 6 491 4.0E-228 T 13-09-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PMA3_RS03870 5bab0430b78c0074dfe3bb4b2ff81617 502 PANTHER PTHR13847 1 403 7.5E-202 T 13-09-2016 PMA3_RS03870 5bab0430b78c0074dfe3bb4b2ff81617 502 PANTHER PTHR13847:SF214 1 403 7.5E-202 T 13-09-2016 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PANTHER PTHR30222:SF11 1 365 4.9E-187 T 13-09-2016 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 SUPERFAMILY SSF53850 25 364 8.86E-99 T 13-09-2016 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 Gene3D G3DSA:3.40.190.10 147 314 9.5E-68 T 13-09-2016 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 Pfam PF13416 Bacterial extracellular solute-binding protein 41 328 6.3E-28 T 13-09-2016 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 90 103 3.0E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 3.0E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 3.0E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 3.0E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 74 88 3.0E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 3.0E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 3.0E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 3.0E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 3.0E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 3.0E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PANTHER PTHR30222 1 365 4.9E-187 T 13-09-2016 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 Gene3D G3DSA:3.40.190.10 27 146 1.7E-10 T 13-09-2016 PMA3_RS16540 e7946918d54e51be29bef82e1eefe0ec 365 PIRSF PIRSF019574 1 365 1.2E-132 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 PANTHER PTHR33751:SF3 1 203 1.0E-64 T 13-09-2016 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 PRINTS PR00605 Class IC cytochrome C signature 32 43 3.7E-5 T 13-09-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 PRINTS PR00605 Class IC cytochrome C signature 177 199 3.7E-5 T 13-09-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 SUPERFAMILY SSF46626 14 99 2.01E-20 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 Pfam PF00034 Cytochrome c 112 201 4.0E-11 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 Pfam PF00034 Cytochrome c 31 100 1.2E-7 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 PIRSF PIRSF000005 1 203 7.2E-60 T 13-09-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 Gene3D G3DSA:1.10.760.10 109 203 1.7E-28 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 PANTHER PTHR33751 1 203 1.0E-64 T 13-09-2016 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 SUPERFAMILY SSF46626 105 202 3.3E-21 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS30350 2d6964f3cdf6504b2e8fec10dd8fd350 203 Gene3D G3DSA:1.10.760.10 22 101 2.5E-26 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07145 0e347aad13935a4b8a9629674c58312b 402 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 13-09-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PMA3_RS07145 0e347aad13935a4b8a9629674c58312b 402 Pfam PF00909 Ammonium Transporter Family 19 395 2.4E-86 T 13-09-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PMA3_RS07145 0e347aad13935a4b8a9629674c58312b 402 PANTHER PTHR11730:SF6 1 402 2.8E-124 T 13-09-2016 PMA3_RS07145 0e347aad13935a4b8a9629674c58312b 402 SUPERFAMILY SSF111352 13 380 6.93E-93 T 13-09-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PMA3_RS07145 0e347aad13935a4b8a9629674c58312b 402 Gene3D G3DSA:1.10.3430.10 11 380 1.9E-91 T 13-09-2016 IPR029020 Ammonium/urea transporter PMA3_RS07145 0e347aad13935a4b8a9629674c58312b 402 PANTHER PTHR11730 1 402 2.8E-124 T 13-09-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PMA3_RS05530 a81c09f645c6ac0cc0cfee25b91635f6 506 PANTHER PTHR11895 28 503 1.5E-156 T 13-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS05530 a81c09f645c6ac0cc0cfee25b91635f6 506 Pfam PF01425 Amidase 57 486 1.9E-83 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS05530 a81c09f645c6ac0cc0cfee25b91635f6 506 SUPERFAMILY SSF75304 35 502 6.67E-107 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS05530 a81c09f645c6ac0cc0cfee25b91635f6 506 Gene3D G3DSA:3.90.1300.10 32 504 6.5E-130 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS05530 a81c09f645c6ac0cc0cfee25b91635f6 506 PANTHER PTHR11895:SF8 28 503 1.5E-156 T 13-09-2016 PMA3_RS19280 1df57217681143f48869ccb06f13197f 438 Gene3D G3DSA:1.20.1250.20 5 197 1.3E-44 T 13-09-2016 PMA3_RS19280 1df57217681143f48869ccb06f13197f 438 PANTHER PTHR11662:SF277 4 423 1.3E-103 T 13-09-2016 PMA3_RS19280 1df57217681143f48869ccb06f13197f 438 Gene3D G3DSA:1.20.1250.20 226 425 1.9E-24 T 13-09-2016 PMA3_RS19280 1df57217681143f48869ccb06f13197f 438 Pfam PF07690 Major Facilitator Superfamily 15 384 8.2E-53 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS19280 1df57217681143f48869ccb06f13197f 438 PIRSF PIRSF002808 2 433 3.0E-37 T 13-09-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS19280 1df57217681143f48869ccb06f13197f 438 PANTHER PTHR11662 4 423 1.3E-103 T 13-09-2016 PMA3_RS19280 1df57217681143f48869ccb06f13197f 438 SUPERFAMILY SSF103473 3 419 2.35E-79 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS15920 28f65144b55dbdfccf9a0aaf1431bd92 173 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 14 170 1.6E-48 T 13-09-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PMA3_RS15920 28f65144b55dbdfccf9a0aaf1431bd92 173 PANTHER PTHR10374 11 173 7.2E-88 T 13-09-2016 PMA3_RS15920 28f65144b55dbdfccf9a0aaf1431bd92 173 ProSitePatterns PS00934 Glyoxalase I signature 1. 27 48 - T 13-09-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PMA3_RS15920 28f65144b55dbdfccf9a0aaf1431bd92 173 PANTHER PTHR10374:SF16 11 173 7.2E-88 T 13-09-2016 PMA3_RS15920 28f65144b55dbdfccf9a0aaf1431bd92 173 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 167 2.9E-22 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS15920 28f65144b55dbdfccf9a0aaf1431bd92 173 Gene3D G3DSA:3.10.180.10 10 171 7.2E-62 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS15920 28f65144b55dbdfccf9a0aaf1431bd92 173 SUPERFAMILY SSF54593 11 172 2.61E-36 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS15920 28f65144b55dbdfccf9a0aaf1431bd92 173 ProSitePatterns PS00935 Glyoxalase I signature 2. 111 127 - T 13-09-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PMA3_RS30335 eacf64d9ad12e175c412646a287d07b0 688 PANTHER PTHR10799:SF750 561 687 1.0E-29 T 13-09-2016 PMA3_RS30335 eacf64d9ad12e175c412646a287d07b0 688 PANTHER PTHR10799:SF750 15 83 1.0E-29 T 13-09-2016 PMA3_RS30335 eacf64d9ad12e175c412646a287d07b0 688 Gene3D G3DSA:3.30.70.270 530 687 1.6E-54 T 13-09-2016 PMA3_RS30335 eacf64d9ad12e175c412646a287d07b0 688 SUPERFAMILY SSF55073 533 686 1.26E-48 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS30335 eacf64d9ad12e175c412646a287d07b0 688 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 526 686 1.0E-48 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS30335 eacf64d9ad12e175c412646a287d07b0 688 SMART SM00267 517 688 1.3E-58 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS30335 eacf64d9ad12e175c412646a287d07b0 688 PANTHER PTHR10799 561 687 1.0E-29 T 13-09-2016 PMA3_RS30335 eacf64d9ad12e175c412646a287d07b0 688 PANTHER PTHR10799 15 83 1.0E-29 T 13-09-2016 PMA3_RS30335 eacf64d9ad12e175c412646a287d07b0 688 Pfam PF00990 Diguanylate cyclase, GGDEF domain 528 684 2.0E-45 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 PANTHER PTHR24423:SF491 42 291 4.9E-78 T 13-09-2016 PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 SUPERFAMILY SSF47384 40 126 1.57E-19 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 208 222 8.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 280 8.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 243 261 8.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 226 236 8.4E-17 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 Gene3D G3DSA:1.10.287.130 48 121 8.1E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 172 282 3.9E-24 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 PANTHER PTHR24423 42 291 4.9E-78 T 13-09-2016 PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 SMART SM00387 171 283 1.5E-29 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 Gene3D G3DSA:3.30.565.10 126 285 2.4E-39 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 SUPERFAMILY SSF55874 114 281 5.5E-41 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 Pfam PF00512 His Kinase A (phospho-acceptor) domain 58 125 4.3E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12130 f45fa95f48388ac0139c7884d57ac970 291 SMART SM00388 57 125 4.0E-19 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS24320 c2996a59105376a9d3aacd54f4264085 349 Gene3D G3DSA:3.40.1780.10 175 337 8.1E-103 T 13-09-2016 PMA3_RS24320 c2996a59105376a9d3aacd54f4264085 349 Gene3D G3DSA:3.40.1780.10 1 62 8.1E-103 T 13-09-2016 PMA3_RS24320 c2996a59105376a9d3aacd54f4264085 349 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 337 2.9E-148 T 13-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS24320 c2996a59105376a9d3aacd54f4264085 349 Pfam PF02547 Queuosine biosynthesis protein 4 336 7.8E-135 T 13-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS24320 c2996a59105376a9d3aacd54f4264085 349 PANTHER PTHR30307:SF0 2 343 5.5E-178 T 13-09-2016 PMA3_RS24320 c2996a59105376a9d3aacd54f4264085 349 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 337 47.383 T 13-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS24320 c2996a59105376a9d3aacd54f4264085 349 Gene3D G3DSA:2.40.10.240 64 130 1.0E-15 T 13-09-2016 PMA3_RS24320 c2996a59105376a9d3aacd54f4264085 349 SUPERFAMILY SSF111337 1 336 9.81E-137 T 13-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS24320 c2996a59105376a9d3aacd54f4264085 349 PANTHER PTHR30307 2 343 5.5E-178 T 13-09-2016 PMA3_RS00665 266689e11828b010a5cddc3a472f81e1 311 PANTHER PTHR11732 9 298 2.7E-96 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS00665 266689e11828b010a5cddc3a472f81e1 311 PANTHER PTHR11732:SF275 9 298 2.7E-96 T 13-09-2016 PMA3_RS00665 266689e11828b010a5cddc3a472f81e1 311 Gene3D G3DSA:3.20.20.100 17 306 1.8E-73 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS00665 266689e11828b010a5cddc3a472f81e1 311 PRINTS PR00069 Aldo-keto reductase signature 158 175 9.0E-6 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS00665 266689e11828b010a5cddc3a472f81e1 311 PRINTS PR00069 Aldo-keto reductase signature 52 76 9.0E-6 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS00665 266689e11828b010a5cddc3a472f81e1 311 PRINTS PR00069 Aldo-keto reductase signature 232 256 9.0E-6 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS00665 266689e11828b010a5cddc3a472f81e1 311 Pfam PF00248 Aldo/keto reductase family 23 299 2.7E-58 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS00665 266689e11828b010a5cddc3a472f81e1 311 SUPERFAMILY SSF51430 12 299 7.6E-74 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS23840 ef45a2ee965b4da2ba4566633a30ae72 304 SUPERFAMILY SSF53850 10 272 5.23E-63 T 13-09-2016 PMA3_RS23840 ef45a2ee965b4da2ba4566633a30ae72 304 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 269 5.1E-50 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS23840 ef45a2ee965b4da2ba4566633a30ae72 304 PANTHER PTHR30085 7 301 9.8E-134 T 13-09-2016 PMA3_RS23840 ef45a2ee965b4da2ba4566633a30ae72 304 Gene3D G3DSA:3.40.190.10 232 274 4.7E-28 T 13-09-2016 PMA3_RS23840 ef45a2ee965b4da2ba4566633a30ae72 304 Gene3D G3DSA:3.40.190.10 34 124 4.7E-28 T 13-09-2016 PMA3_RS23840 ef45a2ee965b4da2ba4566633a30ae72 304 Gene3D G3DSA:3.40.190.10 125 231 3.6E-30 T 13-09-2016 PMA3_RS23840 ef45a2ee965b4da2ba4566633a30ae72 304 PANTHER PTHR30085:SF2 7 301 9.8E-134 T 13-09-2016 PMA3_RS23840 ef45a2ee965b4da2ba4566633a30ae72 304 SMART SM00062 38 271 4.8E-54 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS02410 e9ac14b7eadeee0f4dc04f576eb8454a 279 PANTHER PTHR33643 1 276 4.6E-49 T 13-09-2016 PMA3_RS02410 e9ac14b7eadeee0f4dc04f576eb8454a 279 PANTHER PTHR33643:SF1 1 276 4.6E-49 T 13-09-2016 PMA3_RS02410 e9ac14b7eadeee0f4dc04f576eb8454a 279 Pfam PF01774 UreD urease accessory protein 57 249 3.1E-45 T 13-09-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 PMA3_RS02410 e9ac14b7eadeee0f4dc04f576eb8454a 279 Hamap MF_01384 Urease accessory protein UreD [ureD]. 14 263 28.792 T 13-09-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 PMA3_RS27310 e4425ff9697eeb7c6057d0a1f5069cce 166 PANTHER PTHR11560 2 164 6.4E-55 T 13-09-2016 PMA3_RS27310 e4425ff9697eeb7c6057d0a1f5069cce 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 13-09-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27310 e4425ff9697eeb7c6057d0a1f5069cce 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 27.376 T 13-09-2016 IPR022973 Ribosomal protein L10 PMA3_RS27310 e4425ff9697eeb7c6057d0a1f5069cce 166 SUPERFAMILY SSF160369 4 160 4.32E-48 T 13-09-2016 PMA3_RS27310 e4425ff9697eeb7c6057d0a1f5069cce 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 75 154 3.0E-5 T 13-09-2016 PMA3_RS27310 e4425ff9697eeb7c6057d0a1f5069cce 166 Pfam PF00466 Ribosomal protein L10 5 101 9.6E-25 T 13-09-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 SUPERFAMILY SSF54534 165 269 1.77E-26 T 13-09-2016 PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 205 225 - T 13-09-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 Pfam PF09312 SurA N-terminal domain 18 135 9.1E-48 T 13-09-2016 IPR015391 SurA N-terminal PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 PANTHER PTHR10657 1 417 2.8E-219 T 13-09-2016 PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 Pfam PF13616 PPIC-type PPIASE domain 268 373 1.5E-28 T 13-09-2016 PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 Hamap MF_01183 Chaperone SurA [surA]. 1 419 33.584 T 13-09-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 SUPERFAMILY SSF109998 18 194 4.51E-44 T 13-09-2016 IPR027304 Trigger factor/SurA domain PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 Pfam PF00639 PPIC-type PPIASE domain 172 263 1.2E-17 T 13-09-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 Gene3D G3DSA:3.10.50.40 161 271 3.0E-29 T 13-09-2016 PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 Gene3D G3DSA:3.10.50.40 274 396 3.3E-37 T 13-09-2016 PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 PANTHER PTHR10657:SF16 1 417 2.8E-219 T 13-09-2016 PMA3_RS27555 e8a693adc3bdd2d43252e54b7391748a 426 SUPERFAMILY SSF54534 274 375 3.73E-33 T 13-09-2016 PMA3_RS09465 93b93aafb0082fe514789a50d7cc76a1 406 PANTHER PTHR23547:SF1 1 406 3.7E-180 T 13-09-2016 PMA3_RS09465 93b93aafb0082fe514789a50d7cc76a1 406 Gene3D G3DSA:1.20.1250.20 12 203 2.7E-14 T 13-09-2016 PMA3_RS09465 93b93aafb0082fe514789a50d7cc76a1 406 Gene3D G3DSA:1.20.1250.20 220 402 1.6E-12 T 13-09-2016 PMA3_RS09465 93b93aafb0082fe514789a50d7cc76a1 406 Pfam PF07690 Major Facilitator Superfamily 21 298 1.7E-15 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS09465 93b93aafb0082fe514789a50d7cc76a1 406 SUPERFAMILY SSF103473 13 401 1.83E-31 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS09465 93b93aafb0082fe514789a50d7cc76a1 406 PANTHER PTHR23547 1 406 3.7E-180 T 13-09-2016 PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 5.3E-8 T 13-09-2016 PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 5.3E-8 T 13-09-2016 PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 5.3E-8 T 13-09-2016 PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 5.3E-8 T 13-09-2016 PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 PANTHER PTHR23501:SF1 12 475 2.0E-238 T 13-09-2016 PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 PANTHER PTHR23501 12 475 2.0E-238 T 13-09-2016 PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 Gene3D G3DSA:1.20.1250.20 17 198 1.9E-27 T 13-09-2016 PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 Gene3D G3DSA:1.20.1250.20 264 469 6.8E-19 T 13-09-2016 PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 SUPERFAMILY SSF103473 249 463 2.09E-60 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 SUPERFAMILY SSF103473 7 201 2.09E-60 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 Pfam PF07690 Major Facilitator Superfamily 19 410 6.6E-42 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS28145 4698bdbc97d3f2ca56e876b8b8a02a01 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 417 4.1E-77 T 13-09-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 PMA3_RS05805 e526ccb29e095d75009a9e7d4c9aaa31 147 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 147 7.0E-50 T 13-09-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 PMA3_RS05805 e526ccb29e095d75009a9e7d4c9aaa31 147 Pfam PF00460 Flagella basal body rod protein 7 34 1.0E-8 T 13-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PMA3_RS05805 e526ccb29e095d75009a9e7d4c9aaa31 147 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-09-2016 IPR019776 Flagellar basal body rod protein, conserved site PMA3_RS05805 e526ccb29e095d75009a9e7d4c9aaa31 147 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 60 145 5.2E-14 T 13-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PMA3_RS05805 e526ccb29e095d75009a9e7d4c9aaa31 147 PANTHER PTHR30435 1 147 5.7E-67 T 13-09-2016 PMA3_RS05805 e526ccb29e095d75009a9e7d4c9aaa31 147 PANTHER PTHR30435:SF2 1 147 5.7E-67 T 13-09-2016 PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 SUPERFAMILY SSF55785 193 308 3.32E-17 T 13-09-2016 IPR000014 PAS domain PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 Pfam PF08447 PAS fold 214 300 1.4E-14 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 SMART SM00267 306 478 2.3E-59 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 SUPERFAMILY SSF55073 322 480 1.88E-49 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 316 476 1.5E-43 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 PANTHER PTHR10799 350 588 2.3E-73 T 13-09-2016 PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 PANTHER PTHR10799 127 279 2.3E-73 T 13-09-2016 PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 SUPERFAMILY SSF141868 494 743 9.68E-65 T 13-09-2016 IPR001633 EAL domain PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 234 312 1.2E-12 T 13-09-2016 IPR000014 PAS domain PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 SMART SM00086 264 306 3.2E-8 T 13-09-2016 IPR001610 PAC motif PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 Pfam PF00072 Response regulator receiver domain 63 155 2.7E-6 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 Gene3D G3DSA:3.40.50.2300 10 167 8.4E-27 T 13-09-2016 PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 SUPERFAMILY SSF52172 11 53 5.4E-13 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 SUPERFAMILY SSF52172 83 197 5.4E-13 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 Pfam PF00990 Diguanylate cyclase, GGDEF domain 317 474 3.1E-46 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 Pfam PF00563 EAL domain 494 730 1.1E-56 T 13-09-2016 IPR001633 EAL domain PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 Gene3D G3DSA:3.30.450.20 213 313 2.6E-18 T 13-09-2016 PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 Gene3D G3DSA:3.30.70.270 318 486 9.7E-57 T 13-09-2016 PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 SMART SM00052 488 736 1.0E-73 T 13-09-2016 IPR001633 EAL domain PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 PANTHER PTHR10799:SF657 350 588 2.3E-73 T 13-09-2016 PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 PANTHER PTHR10799:SF657 127 279 2.3E-73 T 13-09-2016 PMA3_RS23910 769c9b843c815b20f8aea1369d7a3334 768 Gene3D G3DSA:3.20.20.450 492 743 2.5E-74 T 13-09-2016 IPR001633 EAL domain PMA3_RS21105 2350d9fd1ca8cb4c46af11d6ba7b36bf 483 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 231 5.5E-27 T 13-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PMA3_RS21105 2350d9fd1ca8cb4c46af11d6ba7b36bf 483 SUPERFAMILY SSF52317 251 443 1.8E-40 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS21105 2350d9fd1ca8cb4c46af11d6ba7b36bf 483 Gene3D G3DSA:3.40.50.300 1 235 2.2E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21105 2350d9fd1ca8cb4c46af11d6ba7b36bf 483 PANTHER PTHR21343:SF1 1 481 2.6E-228 T 13-09-2016 PMA3_RS21105 2350d9fd1ca8cb4c46af11d6ba7b36bf 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 475 1.9E-142 T 13-09-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 PMA3_RS21105 2350d9fd1ca8cb4c46af11d6ba7b36bf 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 250 433 4.3E-58 T 13-09-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 PMA3_RS21105 2350d9fd1ca8cb4c46af11d6ba7b36bf 483 PANTHER PTHR21343 1 481 2.6E-228 T 13-09-2016 PMA3_RS21105 2350d9fd1ca8cb4c46af11d6ba7b36bf 483 SUPERFAMILY SSF52540 1 237 1.12E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21105 2350d9fd1ca8cb4c46af11d6ba7b36bf 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 215.115 T 13-09-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 PMA3_RS21105 2350d9fd1ca8cb4c46af11d6ba7b36bf 483 Gene3D G3DSA:3.40.50.880 250 443 4.2E-31 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS09870 8f2ee8a4fa828d11f449e5cfa1a921b1 239 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 12 43 1.7E-16 T 13-09-2016 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 PMA3_RS09870 8f2ee8a4fa828d11f449e5cfa1a921b1 239 SUPERFAMILY SSF49482 10 238 4.97E-75 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS09870 8f2ee8a4fa828d11f449e5cfa1a921b1 239 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 17 238 1.1E-109 T 13-09-2016 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 PMA3_RS09870 8f2ee8a4fa828d11f449e5cfa1a921b1 239 PANTHER PTHR33711 8 238 4.8E-134 T 13-09-2016 PMA3_RS09870 8f2ee8a4fa828d11f449e5cfa1a921b1 239 Pfam PF00775 Dioxygenase 49 230 1.7E-58 T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS09870 8f2ee8a4fa828d11f449e5cfa1a921b1 239 Gene3D G3DSA:2.60.130.10 9 238 1.4E-78 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS09870 8f2ee8a4fa828d11f449e5cfa1a921b1 239 PANTHER PTHR33711:SF1 8 238 4.8E-134 T 13-09-2016 PMA3_RS09870 8f2ee8a4fa828d11f449e5cfa1a921b1 239 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 81 109 - T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS16095 f7e82f447de4bf2386e5134ac0d17eac 131 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 13-09-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PMA3_RS16095 f7e82f447de4bf2386e5134ac0d17eac 131 Gene3D G3DSA:3.10.180.10 1 130 2.6E-41 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS16095 f7e82f447de4bf2386e5134ac0d17eac 131 PANTHER PTHR10374 1 125 1.3E-47 T 13-09-2016 PMA3_RS16095 f7e82f447de4bf2386e5134ac0d17eac 131 SUPERFAMILY SSF54593 1 127 1.22E-31 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS16095 f7e82f447de4bf2386e5134ac0d17eac 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 1.5E-17 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS16095 f7e82f447de4bf2386e5134ac0d17eac 131 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 4.0E-55 T 13-09-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PMA3_RS08740 0c12789e9576e2886922a1edf9db5de3 206 SUPERFAMILY SSF56784 15 195 3.96E-26 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS08740 0c12789e9576e2886922a1edf9db5de3 206 Gene3D G3DSA:3.40.50.1000 14 193 4.3E-13 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS22800 321f4ed3b93d9a8cea3023b2f69c9bbc 114 SUPERFAMILY SSF160113 1 57 8.24E-17 T 13-09-2016 IPR010879 Domain of unknown function DUF1508 PMA3_RS22800 321f4ed3b93d9a8cea3023b2f69c9bbc 114 Pfam PF07411 Domain of unknown function (DUF1508) 11 57 1.2E-18 T 13-09-2016 IPR010879 Domain of unknown function DUF1508 PMA3_RS22800 321f4ed3b93d9a8cea3023b2f69c9bbc 114 Pfam PF07411 Domain of unknown function (DUF1508) 63 108 6.9E-18 T 13-09-2016 IPR010879 Domain of unknown function DUF1508 PMA3_RS22800 321f4ed3b93d9a8cea3023b2f69c9bbc 114 Gene3D G3DSA:3.30.160.160 55 100 2.9E-18 T 13-09-2016 IPR010879 Domain of unknown function DUF1508 PMA3_RS22800 321f4ed3b93d9a8cea3023b2f69c9bbc 114 Gene3D G3DSA:3.30.160.160 3 49 1.4E-19 T 13-09-2016 IPR010879 Domain of unknown function DUF1508 PMA3_RS22800 321f4ed3b93d9a8cea3023b2f69c9bbc 114 SUPERFAMILY SSF160113 55 110 1.23E-14 T 13-09-2016 IPR010879 Domain of unknown function DUF1508 PMA3_RS22800 321f4ed3b93d9a8cea3023b2f69c9bbc 114 PANTHER PTHR40606 2 110 4.9E-56 T 13-09-2016 PMA3_RS22800 321f4ed3b93d9a8cea3023b2f69c9bbc 114 PANTHER PTHR40606:SF1 2 110 4.9E-56 T 13-09-2016 PMA3_RS23295 2d4e9548e06187c5f6b799d70b38e25c 200 PANTHER PTHR11544 126 199 4.5E-33 T 13-09-2016 PMA3_RS23295 2d4e9548e06187c5f6b799d70b38e25c 200 PRINTS PR00050 Cold shock protein signature 134 149 6.1E-15 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS23295 2d4e9548e06187c5f6b799d70b38e25c 200 PRINTS PR00050 Cold shock protein signature 169 187 6.1E-15 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS23295 2d4e9548e06187c5f6b799d70b38e25c 200 PRINTS PR00050 Cold shock protein signature 154 163 6.1E-15 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS23295 2d4e9548e06187c5f6b799d70b38e25c 200 Pfam PF00313 'Cold-shock' DNA-binding domain 133 194 2.7E-25 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS23295 2d4e9548e06187c5f6b799d70b38e25c 200 ProSitePatterns PS00352 'Cold-shock' domain signature. 145 163 - T 13-09-2016 IPR019844 Cold-shock conserved site PMA3_RS23295 2d4e9548e06187c5f6b799d70b38e25c 200 SUPERFAMILY SSF50249 128 194 8.78E-22 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS23295 2d4e9548e06187c5f6b799d70b38e25c 200 SMART SM00357 133 196 2.5E-24 T 13-09-2016 IPR011129 Cold shock protein GO:0003676 PMA3_RS23295 2d4e9548e06187c5f6b799d70b38e25c 200 Gene3D G3DSA:2.40.50.140 133 194 4.5E-27 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 PANTHER PTHR11451:SF35 5 224 6.7E-113 T 13-09-2016 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 PANTHER PTHR11451 247 260 6.7E-113 T 13-09-2016 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 SUPERFAMILY SSF52374 9 286 3.22E-87 T 13-09-2016 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 9 274 3.1E-111 T 13-09-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 PANTHER PTHR11451:SF35 247 260 6.7E-113 T 13-09-2016 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 189 197 3.7E-13 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 12 24 3.7E-13 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 173 183 3.7E-13 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 26 37 3.7E-13 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 54 3.7E-13 T 13-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 Gene3D G3DSA:3.40.50.620 9 74 3.3E-41 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 Gene3D G3DSA:3.40.50.620 175 224 3.3E-41 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 12 234 5.4E-45 T 13-09-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 9 293 42.878 T 13-09-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 PANTHER PTHR11451 5 224 6.7E-113 T 13-09-2016 PMA3_RS03485 9dd1df2875235edf0924e39b51fe6f3f 298 Gene3D G3DSA:3.90.800.10 75 173 1.9E-20 T 13-09-2016 PMA3_RS25310 73814dd186b5e890ed73a76522adaf8e 531 SUPERFAMILY SSF53850 26 528 1.72E-140 T 13-09-2016 PMA3_RS25310 73814dd186b5e890ed73a76522adaf8e 531 Gene3D G3DSA:3.10.105.10 285 501 4.9E-60 T 13-09-2016 PMA3_RS25310 73814dd186b5e890ed73a76522adaf8e 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 449 5.3E-94 T 13-09-2016 IPR000914 Solute-binding protein family 5 domain PMA3_RS25310 73814dd186b5e890ed73a76522adaf8e 531 Gene3D G3DSA:3.90.76.10 34 214 9.6E-47 T 13-09-2016 PMA3_RS25310 73814dd186b5e890ed73a76522adaf8e 531 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 74 96 - T 13-09-2016 IPR023765 Solute-binding protein family 5, conserved site PMA3_RS25310 73814dd186b5e890ed73a76522adaf8e 531 PANTHER PTHR30290:SF14 7 531 1.4E-195 T 13-09-2016 PMA3_RS25310 73814dd186b5e890ed73a76522adaf8e 531 PIRSF PIRSF002741 22 530 5.9E-106 T 13-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PMA3_RS25310 73814dd186b5e890ed73a76522adaf8e 531 PANTHER PTHR30290 7 531 1.4E-195 T 13-09-2016 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 283 8.9E-124 T 13-09-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 PRINTS PR00046 Major sigma-70 factor signature 78 91 2.3E-17 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 2.3E-17 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 PRINTS PR00046 Major sigma-70 factor signature 233 245 2.3E-17 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 2.3E-17 T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 Pfam PF00140 Sigma-70 factor, region 1.2 17 40 1.2E-5 T 13-09-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 Gene3D G3DSA:1.10.601.10 16 123 2.7E-34 T 13-09-2016 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 SUPERFAMILY SSF88659 197 281 5.61E-17 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 Pfam PF04542 Sigma-70 region 2 55 123 2.4E-16 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 PANTHER PTHR30376 3 279 5.1E-114 T 13-09-2016 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.265 T 13-09-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 Pfam PF04545 Sigma-70, region 4 229 279 3.8E-15 T 13-09-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 SUPERFAMILY SSF88946 15 123 1.44E-38 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 Gene3D G3DSA:1.10.10.10 225 279 8.4E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 280 1.2E-30 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS28545 1245c9eba930db5bbb72fa8bae10b95d 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS15400 2cadfc54a04fda62060d43a5c70fe0ac 610 Gene3D G3DSA:3.10.105.10 321 574 7.4E-48 T 13-09-2016 PMA3_RS15400 2cadfc54a04fda62060d43a5c70fe0ac 610 Gene3D G3DSA:3.90.76.10 64 229 1.2E-33 T 13-09-2016 PMA3_RS15400 2cadfc54a04fda62060d43a5c70fe0ac 610 PANTHER PTHR30290:SF2 3 385 7.1E-210 T 13-09-2016 PMA3_RS15400 2cadfc54a04fda62060d43a5c70fe0ac 610 PANTHER PTHR30290:SF2 413 610 7.1E-210 T 13-09-2016 PMA3_RS15400 2cadfc54a04fda62060d43a5c70fe0ac 610 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 114 518 1.2E-75 T 13-09-2016 IPR000914 Solute-binding protein family 5 domain PMA3_RS15400 2cadfc54a04fda62060d43a5c70fe0ac 610 PANTHER PTHR30290 3 385 7.1E-210 T 13-09-2016 PMA3_RS15400 2cadfc54a04fda62060d43a5c70fe0ac 610 PANTHER PTHR30290 413 610 7.1E-210 T 13-09-2016 PMA3_RS15400 2cadfc54a04fda62060d43a5c70fe0ac 610 PIRSF PIRSF002741 5 607 7.7E-103 T 13-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PMA3_RS15400 2cadfc54a04fda62060d43a5c70fe0ac 610 SUPERFAMILY SSF53850 50 604 1.71E-121 T 13-09-2016 PMA3_RS12505 261333da700fadef30c4e4813ac20831 321 PANTHER PTHR10210:SF32 7 286 2.5E-50 T 13-09-2016 PMA3_RS12505 261333da700fadef30c4e4813ac20831 321 SUPERFAMILY SSF53271 112 290 7.32E-22 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS12505 261333da700fadef30c4e4813ac20831 321 SUPERFAMILY SSF53271 8 164 1.3E-32 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS12505 261333da700fadef30c4e4813ac20831 321 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 312 9.6E-57 T 13-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PMA3_RS12505 261333da700fadef30c4e4813ac20831 321 Pfam PF14572 Phosphoribosyl synthetase-associated domain 218 287 1.8E-10 T 13-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PMA3_RS12505 261333da700fadef30c4e4813ac20831 321 SMART SM01400 6 126 1.1E-33 T 13-09-2016 PMA3_RS12505 261333da700fadef30c4e4813ac20831 321 PANTHER PTHR10210 7 286 2.5E-50 T 13-09-2016 PMA3_RS12505 261333da700fadef30c4e4813ac20831 321 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 126 2.1E-22 T 13-09-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PMA3_RS12505 261333da700fadef30c4e4813ac20831 321 Gene3D G3DSA:3.40.50.2020 167 286 8.4E-24 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS12505 261333da700fadef30c4e4813ac20831 321 Gene3D G3DSA:3.40.50.2020 7 166 2.1E-33 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 Gene3D G3DSA:3.40.190.10 180 263 1.2E-16 T 13-09-2016 PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.0E-22 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 Pfam PF03466 LysR substrate binding domain 93 293 7.4E-31 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 SUPERFAMILY SSF53850 93 297 1.47E-29 T 13-09-2016 PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 Gene3D G3DSA:3.40.190.10 94 179 9.2E-18 T 13-09-2016 PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.3E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.3E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.3E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 PANTHER PTHR30537:SF26 1 298 1.4E-103 T 13-09-2016 PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 Gene3D G3DSA:1.10.10.10 1 87 1.2E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 SUPERFAMILY SSF46785 3 87 1.47E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29370 8ae79533b0aa672eef87db962489f314 306 PANTHER PTHR30537 1 298 1.4E-103 T 13-09-2016 PMA3_RS19975 4fe3d45a81dd72574e08919ca80a60ac 276 Gene3D G3DSA:3.40.50.1820 9 270 1.7E-53 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS19975 4fe3d45a81dd72574e08919ca80a60ac 276 SUPERFAMILY SSF53474 8 270 9.6E-60 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS19975 4fe3d45a81dd72574e08919ca80a60ac 276 PANTHER PTHR10992 9 272 4.8E-44 T 13-09-2016 PMA3_RS19975 4fe3d45a81dd72574e08919ca80a60ac 276 PANTHER PTHR10992:SF830 9 272 4.8E-44 T 13-09-2016 PMA3_RS19975 4fe3d45a81dd72574e08919ca80a60ac 276 Pfam PF12697 Alpha/beta hydrolase family 28 265 9.5E-19 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS19975 4fe3d45a81dd72574e08919ca80a60ac 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 1.4E-7 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS19975 4fe3d45a81dd72574e08919ca80a60ac 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 1.4E-7 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS19975 4fe3d45a81dd72574e08919ca80a60ac 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 1.4E-7 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS26470 8ae9b1f882919fb88370d4542b1218ac 245 PANTHER PTHR37844 1 237 2.5E-18 T 13-09-2016 PMA3_RS26470 8ae9b1f882919fb88370d4542b1218ac 245 Gene3D G3DSA:3.60.21.10 1 63 8.9E-16 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS26470 8ae9b1f882919fb88370d4542b1218ac 245 Gene3D G3DSA:3.60.21.10 140 221 8.9E-16 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS26470 8ae9b1f882919fb88370d4542b1218ac 245 SUPERFAMILY SSF56300 1 107 5.21E-27 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS26470 8ae9b1f882919fb88370d4542b1218ac 245 SUPERFAMILY SSF56300 146 235 5.21E-27 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS26470 8ae9b1f882919fb88370d4542b1218ac 245 Pfam PF00149 Calcineurin-like phosphoesterase 2 212 6.3E-13 T 13-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 PRINTS PR00409 Phthalate dioxygenase reductase family signature 263 282 1.7E-8 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 PRINTS PR00409 Phthalate dioxygenase reductase family signature 227 241 1.7E-8 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 PRINTS PR00409 Phthalate dioxygenase reductase family signature 241 255 1.7E-8 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 Pfam PF00042 Globin 6 103 1.3E-9 T 13-09-2016 IPR000971 Globin GO:0019825|GO:0020037 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 Pfam PF00175 Oxidoreductase NAD-binding domain 264 368 2.1E-12 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 PANTHER PTHR22924 1 392 4.4E-112 T 13-09-2016 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 Gene3D G3DSA:3.40.50.80 258 390 1.1E-32 T 13-09-2016 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 SUPERFAMILY SSF52343 257 389 2.75E-35 T 13-09-2016 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 SUPERFAMILY SSF63380 151 253 1.68E-26 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 Gene3D G3DSA:1.10.490.10 3 143 6.1E-49 T 13-09-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 Gene3D G3DSA:2.40.30.10 152 255 8.0E-30 T 13-09-2016 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 SUPERFAMILY SSF46458 2 144 5.49E-38 T 13-09-2016 IPR009050 Globin-like PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 PANTHER PTHR22924:SF49 1 392 4.4E-112 T 13-09-2016 PMA3_RS04240 98e03566863abdb28f3dce7eb66db652 393 Pfam PF00970 Oxidoreductase FAD-binding domain 159 253 1.4E-13 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS17875 696a62f7f9a7bf7577727eb6e5e65d49 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 250 5.1E-12 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17875 696a62f7f9a7bf7577727eb6e5e65d49 262 Gene3D G3DSA:1.10.3720.10 5 248 1.3E-45 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17875 696a62f7f9a7bf7577727eb6e5e65d49 262 PANTHER PTHR30193 18 256 3.1E-55 T 13-09-2016 PMA3_RS17875 696a62f7f9a7bf7577727eb6e5e65d49 262 SUPERFAMILY SSF161098 3 249 5.89E-50 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17875 696a62f7f9a7bf7577727eb6e5e65d49 262 PANTHER PTHR30193:SF30 18 256 3.1E-55 T 13-09-2016 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 132 430 8.6E-59 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 9 433 1.5E-191 T 13-09-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 PANTHER PTHR11820:SF1 4 95 8.7E-166 T 13-09-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 PANTHER PTHR11820:SF1 301 434 8.7E-166 T 13-09-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 SUPERFAMILY SSF56529 129 433 3.4E-94 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 PANTHER PTHR11820:SF1 126 280 8.7E-166 T 13-09-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 Gene3D G3DSA:2.30.30.230 9 128 5.7E-30 T 13-09-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 Pfam PF09298 Fumarylacetoacetase N-terminal 23 126 2.6E-19 T 13-09-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 PANTHER PTHR11820 4 95 8.7E-166 T 13-09-2016 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 PANTHER PTHR11820 301 434 8.7E-166 T 13-09-2016 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 Gene3D G3DSA:3.90.850.10 129 427 7.9E-107 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 SUPERFAMILY SSF63433 8 126 1.31E-28 T 13-09-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PMA3_RS24825 b05a6d4a52a4078a1c28596cc803bb68 434 PANTHER PTHR11820 126 280 8.7E-166 T 13-09-2016 PMA3_RS21115 49f6657e1908ae26a9c125ce71c7374d 302 PANTHER PTHR34308 1 294 7.0E-103 T 13-09-2016 PMA3_RS21115 49f6657e1908ae26a9c125ce71c7374d 302 PANTHER PTHR34308:SF1 1 294 7.0E-103 T 13-09-2016 PMA3_RS21115 49f6657e1908ae26a9c125ce71c7374d 302 Pfam PF03186 CobD/Cbib protein 8 282 2.1E-96 T 13-09-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PMA3_RS21115 49f6657e1908ae26a9c125ce71c7374d 302 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 302 106.688 T 13-09-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PMA3_RS21115 49f6657e1908ae26a9c125ce71c7374d 302 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 269 4.7E-60 T 13-09-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PMA3_RS18645 78532ec25551b47cc57844d670b79c27 297 Gene3D G3DSA:3.20.20.370 3 296 8.5E-92 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS18645 78532ec25551b47cc57844d670b79c27 297 PANTHER PTHR10587:SF72 7 294 3.3E-135 T 13-09-2016 PMA3_RS18645 78532ec25551b47cc57844d670b79c27 297 Pfam PF01522 Polysaccharide deacetylase 71 175 8.4E-14 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS18645 78532ec25551b47cc57844d670b79c27 297 PANTHER PTHR10587 7 294 3.3E-135 T 13-09-2016 PMA3_RS18645 78532ec25551b47cc57844d670b79c27 297 SUPERFAMILY SSF88713 4 296 3.95E-85 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS02405 8842b80eac47cc3d9504caef4fbedaea 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.326 T 13-09-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02405 8842b80eac47cc3d9504caef4fbedaea 100 SUPERFAMILY SSF54111 1 99 5.36E-46 T 13-09-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02405 8842b80eac47cc3d9504caef4fbedaea 100 Gene3D G3DSA:3.30.280.10 1 99 5.1E-49 T 13-09-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02405 8842b80eac47cc3d9504caef4fbedaea 100 Pfam PF00547 Urease, gamma subunit 1 99 3.1E-46 T 13-09-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02405 8842b80eac47cc3d9504caef4fbedaea 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 2.5E-51 T 13-09-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02405 8842b80eac47cc3d9504caef4fbedaea 100 PIRSF PIRSF001223 1 100 1.5E-49 T 13-09-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02405 8842b80eac47cc3d9504caef4fbedaea 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 2.0E-45 T 13-09-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02405 8842b80eac47cc3d9504caef4fbedaea 100 PANTHER PTHR33569:SF1 2 99 1.4E-42 T 13-09-2016 PMA3_RS02405 8842b80eac47cc3d9504caef4fbedaea 100 PANTHER PTHR33569 2 99 1.4E-42 T 13-09-2016 PMA3_RS03580 02247239baef98ca060db37f13c01075 574 SUPERFAMILY SSF52518 370 571 4.37E-67 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS03580 02247239baef98ca060db37f13c01075 574 PANTHER PTHR18968:SF116 4 574 0.0 T 13-09-2016 PMA3_RS03580 02247239baef98ca060db37f13c01075 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 4.6E-51 T 13-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PMA3_RS03580 02247239baef98ca060db37f13c01075 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 8.2E-257 T 13-09-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS03580 02247239baef98ca060db37f13c01075 574 SUPERFAMILY SSF52467 189 360 4.58E-63 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS03580 02247239baef98ca060db37f13c01075 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 2.6E-43 T 13-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PMA3_RS03580 02247239baef98ca060db37f13c01075 574 Gene3D G3DSA:3.40.50.1220 190 359 4.3E-63 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS03580 02247239baef98ca060db37f13c01075 574 Gene3D G3DSA:3.40.50.970 4 174 1.0E-73 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS03580 02247239baef98ca060db37f13c01075 574 PANTHER PTHR18968 4 574 0.0 T 13-09-2016 PMA3_RS03580 02247239baef98ca060db37f13c01075 574 SUPERFAMILY SSF52518 4 179 5.05E-65 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS03580 02247239baef98ca060db37f13c01075 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 2.8E-60 T 13-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PMA3_RS03580 02247239baef98ca060db37f13c01075 574 Gene3D G3DSA:3.40.50.970 368 572 1.6E-73 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS11330 78cc21272cafbc7bd576024891203fd5 160 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 9 156 2.7E-33 T 13-09-2016 IPR017737 Type VI secretion system, lysozyme-related protein PMA3_RS11330 78cc21272cafbc7bd576024891203fd5 160 Pfam PF04965 Gene 25-like lysozyme 36 135 5.9E-13 T 13-09-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD PMA3_RS11330 78cc21272cafbc7bd576024891203fd5 160 SUPERFAMILY SSF160719 35 146 3.4E-8 T 13-09-2016 PMA3_RS11330 78cc21272cafbc7bd576024891203fd5 160 Gene3D G3DSA:3.10.450.40 72 145 8.0E-4 T 13-09-2016 PMA3_RS22815 dd1f8f8a4ccc34a4a53e88bdcdddaee7 296 SUPERFAMILY SSF103481 45 138 2.09E-11 T 13-09-2016 PMA3_RS22815 dd1f8f8a4ccc34a4a53e88bdcdddaee7 296 PANTHER PTHR12715 1 287 1.6E-71 T 13-09-2016 PMA3_RS22815 dd1f8f8a4ccc34a4a53e88bdcdddaee7 296 PANTHER PTHR12715:SF9 1 287 1.6E-71 T 13-09-2016 PMA3_RS22815 dd1f8f8a4ccc34a4a53e88bdcdddaee7 296 SUPERFAMILY SSF103481 192 282 6.15E-12 T 13-09-2016 PMA3_RS22815 dd1f8f8a4ccc34a4a53e88bdcdddaee7 296 Pfam PF00892 EamA-like transporter family 150 282 8.5E-14 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS22815 dd1f8f8a4ccc34a4a53e88bdcdddaee7 296 Pfam PF00892 EamA-like transporter family 7 131 1.9E-14 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS08615 d2b48ac877c33264284334b044ca6154 78 Pfam PF07866 Protein of unknown function (DUF1653) 7 66 5.9E-29 T 13-09-2016 IPR023387 DUF1653-like domain PMA3_RS08615 d2b48ac877c33264284334b044ca6154 78 Gene3D G3DSA:2.30.30.320 2 72 5.8E-32 T 13-09-2016 IPR023387 DUF1653-like domain PMA3_RS02805 6d4d82f28d239895060cd4c823528bb5 225 Pfam PF06267 Family of unknown function (DUF1028) 2 192 1.3E-66 T 13-09-2016 IPR010430 Protein of unknown function DUF1028 PMA3_RS02805 6d4d82f28d239895060cd4c823528bb5 225 Gene3D G3DSA:3.60.20.10 1 216 1.7E-82 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS02805 6d4d82f28d239895060cd4c823528bb5 225 PANTHER PTHR39328 2 225 3.5E-72 T 13-09-2016 PMA3_RS02805 6d4d82f28d239895060cd4c823528bb5 225 PANTHER PTHR39328:SF1 2 225 3.5E-72 T 13-09-2016 PMA3_RS02805 6d4d82f28d239895060cd4c823528bb5 225 SUPERFAMILY SSF56235 1 225 5.25E-76 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS29210 57aec0b789e4009763a4c0f4d4813871 152 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 141 3.5E-47 T 13-09-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 PMA3_RS29210 57aec0b789e4009763a4c0f4d4813871 152 PIRSF PIRSF016548 1 151 3.6E-57 T 13-09-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 PMA3_RS13305 e4f82b7be4d34517c4452535c7d8874e 216 PANTHER PTHR11699:SF15 1 216 1.9E-87 T 13-09-2016 PMA3_RS13305 e4f82b7be4d34517c4452535c7d8874e 216 Pfam PF00171 Aldehyde dehydrogenase family 4 186 1.1E-30 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS13305 e4f82b7be4d34517c4452535c7d8874e 216 Gene3D G3DSA:3.40.309.10 1 166 1.2E-37 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS13305 e4f82b7be4d34517c4452535c7d8874e 216 PANTHER PTHR11699 1 216 1.9E-87 T 13-09-2016 PMA3_RS13305 e4f82b7be4d34517c4452535c7d8874e 216 SUPERFAMILY SSF53720 1 213 2.75E-47 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS24090 b9f13025ecbeb54861cca982616351b8 318 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 318 53.484 T 13-09-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 PMA3_RS24090 b9f13025ecbeb54861cca982616351b8 318 PANTHER PTHR10108:SF847 55 318 3.3E-101 T 13-09-2016 PMA3_RS24090 b9f13025ecbeb54861cca982616351b8 318 PANTHER PTHR10108 55 318 3.3E-101 T 13-09-2016 PMA3_RS24090 b9f13025ecbeb54861cca982616351b8 318 SUPERFAMILY SSF53335 88 317 1.72E-32 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS24090 b9f13025ecbeb54861cca982616351b8 318 Pfam PF08003 Protein of unknown function (DUF1698) 9 318 4.5E-147 T 13-09-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like PMA3_RS24090 b9f13025ecbeb54861cca982616351b8 318 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 9 317 3.2E-141 T 13-09-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 PMA3_RS24090 b9f13025ecbeb54861cca982616351b8 318 Gene3D G3DSA:3.40.50.150 117 317 1.5E-24 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS06705 91babb17ab40fbe2e3b9ef6a94ee0265 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 314 8.5E-42 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS06705 91babb17ab40fbe2e3b9ef6a94ee0265 322 PANTHER PTHR32196 1 322 4.9E-139 T 13-09-2016 PMA3_RS06705 91babb17ab40fbe2e3b9ef6a94ee0265 322 PANTHER PTHR32196:SF37 1 322 4.9E-139 T 13-09-2016 PMA3_RS23810 a6c3321b7fe90beddc81b77e873cdc60 260 Pfam PF02567 Phenazine biosynthesis-like protein 8 255 6.4E-57 T 13-09-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PMA3_RS23810 a6c3321b7fe90beddc81b77e873cdc60 260 Gene3D G3DSA:3.10.310.10 123 247 2.8E-47 T 13-09-2016 PMA3_RS23810 a6c3321b7fe90beddc81b77e873cdc60 260 PIRSF PIRSF016184 1 259 2.2E-58 T 13-09-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PMA3_RS23810 a6c3321b7fe90beddc81b77e873cdc60 260 PANTHER PTHR13774 1 259 2.3E-103 T 13-09-2016 PMA3_RS23810 a6c3321b7fe90beddc81b77e873cdc60 260 Gene3D G3DSA:3.10.310.10 1 122 8.1E-44 T 13-09-2016 PMA3_RS23810 a6c3321b7fe90beddc81b77e873cdc60 260 PANTHER PTHR13774:SF17 1 259 2.3E-103 T 13-09-2016 PMA3_RS23810 a6c3321b7fe90beddc81b77e873cdc60 260 SUPERFAMILY SSF54506 1 259 2.26E-84 T 13-09-2016 PMA3_RS23810 a6c3321b7fe90beddc81b77e873cdc60 260 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 228 6.7E-35 T 13-09-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PMA3_RS16990 a42d8eb1438a823aa5bc510d8005a160 480 SUPERFAMILY SSF53720 4 479 1.44E-151 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS16990 a42d8eb1438a823aa5bc510d8005a160 480 Gene3D G3DSA:3.40.309.10 264 451 1.5E-58 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS16990 a42d8eb1438a823aa5bc510d8005a160 480 PANTHER PTHR11699 6 480 8.2E-231 T 13-09-2016 PMA3_RS16990 a42d8eb1438a823aa5bc510d8005a160 480 PANTHER PTHR11699:SF200 6 480 8.2E-231 T 13-09-2016 PMA3_RS16990 a42d8eb1438a823aa5bc510d8005a160 480 Pfam PF00171 Aldehyde dehydrogenase family 17 475 1.7E-152 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16990 a42d8eb1438a823aa5bc510d8005a160 480 Gene3D G3DSA:3.40.605.10 4 263 2.2E-84 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS25165 0bbe3af04997e04be8eb4bdc32ffb8e9 480 PANTHER PTHR30624 15 480 1.6E-245 T 13-09-2016 PMA3_RS25165 0bbe3af04997e04be8eb4bdc32ffb8e9 480 SUPERFAMILY SSF111283 24 478 3.53E-130 T 13-09-2016 PMA3_RS25165 0bbe3af04997e04be8eb4bdc32ffb8e9 480 PANTHER PTHR30624:SF4 15 480 1.6E-245 T 13-09-2016 PMA3_RS25165 0bbe3af04997e04be8eb4bdc32ffb8e9 480 Pfam PF01523 Putative modulator of DNA gyrase 38 330 2.9E-65 T 13-09-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS25165 0bbe3af04997e04be8eb4bdc32ffb8e9 480 PIRSF PIRSF004919 18 479 4.3E-137 T 13-09-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS21110 1899640cb2915cf9f0e61194565db796 330 SUPERFAMILY SSF53383 3 323 9.41E-52 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS21110 1899640cb2915cf9f0e61194565db796 330 Gene3D G3DSA:3.90.1150.10 221 306 1.5E-4 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS21110 1899640cb2915cf9f0e61194565db796 330 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 322 1.1E-106 T 13-09-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 PMA3_RS21110 1899640cb2915cf9f0e61194565db796 330 Gene3D G3DSA:3.40.640.10 42 220 9.1E-44 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS21110 1899640cb2915cf9f0e61194565db796 330 PANTHER PTHR11751:SF3 3 330 2.2E-48 T 13-09-2016 PMA3_RS21110 1899640cb2915cf9f0e61194565db796 330 Pfam PF00155 Aminotransferase class I and II 52 313 8.4E-24 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS21110 1899640cb2915cf9f0e61194565db796 330 PANTHER PTHR11751 3 330 2.2E-48 T 13-09-2016 PMA3_RS12955 164221f6505f8a0e5438db281d096d5f 380 PIRSF PIRSF000138 1 380 6.0E-122 T 13-09-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 PMA3_RS12955 164221f6505f8a0e5438db281d096d5f 380 Gene3D G3DSA:3.20.20.70 5 376 7.9E-133 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS12955 164221f6505f8a0e5438db281d096d5f 380 PANTHER PTHR10578:SF65 7 378 1.9E-156 T 13-09-2016 PMA3_RS12955 164221f6505f8a0e5438db281d096d5f 380 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.4E-126 T 13-09-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 PMA3_RS12955 164221f6505f8a0e5438db281d096d5f 380 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.31 T 13-09-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 PMA3_RS12955 164221f6505f8a0e5438db281d096d5f 380 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 13-09-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 PMA3_RS12955 164221f6505f8a0e5438db281d096d5f 380 SUPERFAMILY SSF51395 5 375 5.62E-96 T 13-09-2016 PMA3_RS12955 164221f6505f8a0e5438db281d096d5f 380 PANTHER PTHR10578 7 378 1.9E-156 T 13-09-2016 PMA3_RS04300 1eda6e266d91f26f7328a06bf1e783ff 156 Pfam PF12680 SnoaL-like domain 10 110 1.3E-18 T 13-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain PMA3_RS04300 1eda6e266d91f26f7328a06bf1e783ff 156 Gene3D G3DSA:3.10.450.50 1 123 1.1E-25 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS04300 1eda6e266d91f26f7328a06bf1e783ff 156 SUPERFAMILY SSF54427 1 133 7.99E-32 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS04280 22f5c415871ed9efadd03f968e437189 365 Gene3D G3DSA:1.10.3720.10 154 360 3.8E-42 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04280 22f5c415871ed9efadd03f968e437189 365 PANTHER PTHR30085:SF3 63 365 1.7E-162 T 13-09-2016 PMA3_RS04280 22f5c415871ed9efadd03f968e437189 365 SUPERFAMILY SSF161098 155 345 7.19E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04280 22f5c415871ed9efadd03f968e437189 365 PANTHER PTHR30085 63 365 1.7E-162 T 13-09-2016 PMA3_RS04280 22f5c415871ed9efadd03f968e437189 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 1.3E-19 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS04280 22f5c415871ed9efadd03f968e437189 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 359 6.7E-24 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS08340 d803e143b1000596e3a8878bbe15527b 565 SUPERFAMILY SSF56801 22 557 3.66E-151 T 13-09-2016 PMA3_RS08340 d803e143b1000596e3a8878bbe15527b 565 Gene3D G3DSA:3.40.50.980 24 226 1.5E-37 T 13-09-2016 PMA3_RS08340 d803e143b1000596e3a8878bbe15527b 565 PANTHER PTHR24095 25 564 5.8E-188 T 13-09-2016 PMA3_RS08340 d803e143b1000596e3a8878bbe15527b 565 Gene3D G3DSA:3.40.50.980 227 371 8.1E-48 T 13-09-2016 PMA3_RS08340 d803e143b1000596e3a8878bbe15527b 565 Gene3D G3DSA:2.30.38.10 380 452 3.3E-26 T 13-09-2016 PMA3_RS08340 d803e143b1000596e3a8878bbe15527b 565 Gene3D G3DSA:3.30.300.30 457 555 6.0E-32 T 13-09-2016 PMA3_RS08340 d803e143b1000596e3a8878bbe15527b 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS08340 d803e143b1000596e3a8878bbe15527b 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 546 5.1E-16 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS08340 d803e143b1000596e3a8878bbe15527b 565 Pfam PF00501 AMP-binding enzyme 30 462 2.5E-99 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS00575 05829344832d6116dec3a06e8ed365a6 272 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 268 5.7E-96 T 13-09-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 PMA3_RS00575 05829344832d6116dec3a06e8ed365a6 272 PANTHER PTHR30406:SF6 1 270 1.6E-161 T 13-09-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 PMA3_RS00575 05829344832d6116dec3a06e8ed365a6 272 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 270 1.7E-130 T 13-09-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 PMA3_RS00575 05829344832d6116dec3a06e8ed365a6 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 270 2.3E-24 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00575 05829344832d6116dec3a06e8ed365a6 272 PANTHER PTHR30406 1 270 1.6E-161 T 13-09-2016 PMA3_RS00575 05829344832d6116dec3a06e8ed365a6 272 SUPERFAMILY SSF161098 15 267 4.49E-56 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00575 05829344832d6116dec3a06e8ed365a6 272 Gene3D G3DSA:1.10.3720.10 19 269 2.5E-52 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01320 c31aeea0bc3d246aac7a1ee0335e6676 606 SUPERFAMILY SSF74650 38 408 6.28E-164 T 13-09-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PMA3_RS01320 c31aeea0bc3d246aac7a1ee0335e6676 606 PIRSF PIRSF006281 1 606 2.1E-243 T 13-09-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 PMA3_RS01320 c31aeea0bc3d246aac7a1ee0335e6676 606 PANTHER PTHR30504 20 508 0.0 T 13-09-2016 PMA3_RS01320 c31aeea0bc3d246aac7a1ee0335e6676 606 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 38 510 1.9E-189 T 13-09-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 PMA3_RS01320 c31aeea0bc3d246aac7a1ee0335e6676 606 SUPERFAMILY SSF81296 412 510 7.7E-23 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS01320 c31aeea0bc3d246aac7a1ee0335e6676 606 Gene3D G3DSA:2.60.40.10 414 510 2.3E-29 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS01320 c31aeea0bc3d246aac7a1ee0335e6676 606 Gene3D G3DSA:2.70.98.10 37 409 2.5E-173 T 13-09-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PMA3_RS01320 c31aeea0bc3d246aac7a1ee0335e6676 606 PANTHER PTHR30504:SF4 20 508 0.0 T 13-09-2016 PMA3_RS01320 c31aeea0bc3d246aac7a1ee0335e6676 606 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 20 604 62.46 T 13-09-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 PMA3_RS19845 9bb4a8a853cecfd6bd7d5fe8afb86069 157 Pfam PF01047 MarR family 38 96 4.1E-15 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS19845 9bb4a8a853cecfd6bd7d5fe8afb86069 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.3E-19 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS19845 9bb4a8a853cecfd6bd7d5fe8afb86069 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.3E-19 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS19845 9bb4a8a853cecfd6bd7d5fe8afb86069 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.3E-19 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS19845 9bb4a8a853cecfd6bd7d5fe8afb86069 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 1.3E-19 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS19845 9bb4a8a853cecfd6bd7d5fe8afb86069 157 Gene3D G3DSA:1.10.10.10 13 145 1.9E-36 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19845 9bb4a8a853cecfd6bd7d5fe8afb86069 157 PANTHER PTHR18964 14 142 2.0E-29 T 13-09-2016 PMA3_RS19845 9bb4a8a853cecfd6bd7d5fe8afb86069 157 PANTHER PTHR18964:SF141 14 142 2.0E-29 T 13-09-2016 PMA3_RS19845 9bb4a8a853cecfd6bd7d5fe8afb86069 157 SMART SM00347 31 131 4.2E-24 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS19845 9bb4a8a853cecfd6bd7d5fe8afb86069 157 SUPERFAMILY SSF46785 12 145 1.3E-33 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23955 b66d7e4034f30de0ee99e14d4aeb2dbb 313 PANTHER PTHR10859:SF81 1 303 6.9E-157 T 13-09-2016 PMA3_RS23955 b66d7e4034f30de0ee99e14d4aeb2dbb 313 SUPERFAMILY SSF53448 1 237 5.81E-34 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS23955 b66d7e4034f30de0ee99e14d4aeb2dbb 313 PANTHER PTHR10859 1 303 6.9E-157 T 13-09-2016 PMA3_RS23955 b66d7e4034f30de0ee99e14d4aeb2dbb 313 Pfam PF00535 Glycosyl transferase family 2 4 165 3.6E-27 T 13-09-2016 IPR001173 Glycosyltransferase 2-like PMA3_RS23955 b66d7e4034f30de0ee99e14d4aeb2dbb 313 Gene3D G3DSA:3.90.550.10 1 135 6.6E-22 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS19710 88bd0fcbba1b8c3a1c8ea6d1faee6a75 167 PANTHER PTHR33269 1 167 3.8E-82 T 13-09-2016 PMA3_RS19710 88bd0fcbba1b8c3a1c8ea6d1faee6a75 167 PANTHER PTHR33269:SF2 1 167 3.8E-82 T 13-09-2016 PMA3_RS19710 88bd0fcbba1b8c3a1c8ea6d1faee6a75 167 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 159 1.1E-31 T 13-09-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 Pfam PF09364 XFP N-terminal domain 7 383 4.1E-180 T 13-09-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 ProSitePatterns PS60002 Phosphoketolase signature 1. 141 147 - T 13-09-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 398 574 5.7E-88 T 13-09-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 Gene3D G3DSA:3.40.50.970 34 365 9.4E-18 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 PANTHER PTHR31273:SF0 5 789 0.0 T 13-09-2016 PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 PIRSF PIRSF017245 1 787 0.0 T 13-09-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 SUPERFAMILY SSF52518 375 589 4.3E-25 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 ProSitePatterns PS60003 Phosphoketolase signature 2. 154 172 - T 13-09-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 Pfam PF09363 XFP C-terminal domain 585 785 1.0E-85 T 13-09-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 SUPERFAMILY SSF52518 3 367 1.61E-70 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 Hamap MF_01403 Probable phosphoketolase. 2 787 39.408 T 13-09-2016 IPR023962 Probable phosphoketolase PMA3_RS12495 f95a3218511a686eafc09725da0bed06 792 PANTHER PTHR31273 5 789 0.0 T 13-09-2016 PMA3_RS11255 2349d13178223c171b4fb8d82e6ed5a3 161 SUPERFAMILY SSF50475 3 155 1.05E-42 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS11255 2349d13178223c171b4fb8d82e6ed5a3 161 SMART SM00903 11 156 8.5E-48 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS11255 2349d13178223c171b4fb8d82e6ed5a3 161 PANTHER PTHR30466 2 153 2.3E-33 T 13-09-2016 PMA3_RS11255 2349d13178223c171b4fb8d82e6ed5a3 161 Gene3D G3DSA:2.30.110.10 3 153 1.6E-46 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS11255 2349d13178223c171b4fb8d82e6ed5a3 161 Pfam PF01613 Flavin reductase like domain 11 155 2.8E-33 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS27905 bb23109095eb889d2a9e23a90689f643 295 PANTHER PTHR10983:SF15 1 293 3.7E-122 T 13-09-2016 PMA3_RS27905 bb23109095eb889d2a9e23a90689f643 295 SUPERFAMILY SSF69593 1 286 4.32E-56 T 13-09-2016 PMA3_RS27905 bb23109095eb889d2a9e23a90689f643 295 SMART SM00563 84 226 6.6E-14 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS27905 bb23109095eb889d2a9e23a90689f643 295 Pfam PF01553 Acyltransferase 72 225 1.2E-14 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS27905 bb23109095eb889d2a9e23a90689f643 295 PANTHER PTHR10983 1 293 3.7E-122 T 13-09-2016 PMA3_RS27410 b9ec9606ab8e40ae66e91c6bd0eb7122 116 SUPERFAMILY SSF89360 5 102 4.51E-31 T 13-09-2016 IPR000361 FeS cluster biogenesis PMA3_RS27410 b9ec9606ab8e40ae66e91c6bd0eb7122 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.857 T 13-09-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 PMA3_RS27410 b9ec9606ab8e40ae66e91c6bd0eb7122 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 13-09-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site PMA3_RS27410 b9ec9606ab8e40ae66e91c6bd0eb7122 116 Gene3D G3DSA:2.60.300.12 8 102 4.2E-33 T 13-09-2016 IPR000361 FeS cluster biogenesis PMA3_RS27410 b9ec9606ab8e40ae66e91c6bd0eb7122 116 PANTHER PTHR10072 10 116 1.3E-47 T 13-09-2016 PMA3_RS27410 b9ec9606ab8e40ae66e91c6bd0eb7122 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 11 111 2.3E-19 T 13-09-2016 IPR000361 FeS cluster biogenesis PMA3_RS27410 b9ec9606ab8e40ae66e91c6bd0eb7122 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 12 115 4.3E-38 T 13-09-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 PMA3_RS15605 efebc638e63cb4d95f93b144fbdda6b4 272 Gene3D G3DSA:3.40.50.720 11 179 6.8E-33 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15605 efebc638e63cb4d95f93b144fbdda6b4 272 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 173 1.7E-20 T 13-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PMA3_RS15605 efebc638e63cb4d95f93b144fbdda6b4 272 SUPERFAMILY SSF51735 11 235 6.27E-40 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15605 efebc638e63cb4d95f93b144fbdda6b4 272 PANTHER PTHR10366:SF476 11 222 2.5E-45 T 13-09-2016 PMA3_RS15605 efebc638e63cb4d95f93b144fbdda6b4 272 PANTHER PTHR10366 11 222 2.5E-45 T 13-09-2016 PMA3_RS11105 d407750148f08022c0f07cd7b421b3f9 227 Pfam PF01493 GXGXG motif 15 189 2.8E-12 T 13-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PMA3_RS11105 d407750148f08022c0f07cd7b421b3f9 227 SUPERFAMILY SSF69336 3 197 6.28E-43 T 13-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PMA3_RS11105 d407750148f08022c0f07cd7b421b3f9 227 PIRSF PIRSF006519 1 227 1.4E-84 T 13-09-2016 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein PMA3_RS11105 d407750148f08022c0f07cd7b421b3f9 227 Gene3D G3DSA:2.160.20.60 23 197 9.2E-34 T 13-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 115 1.6E-19 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 SUPERFAMILY SSF161098 15 206 1.96E-34 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 Pfam PF00005 ABC transporter 272 427 4.2E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 Gene3D G3DSA:3.40.50.300 256 499 2.8E-74 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 PANTHER PTHR24220 257 501 3.9E-112 T 13-09-2016 PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 PANTHER PTHR24220:SF327 257 501 3.9E-112 T 13-09-2016 PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 220 7.7E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 SUPERFAMILY SSF52540 262 495 1.98E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 Gene3D G3DSA:1.10.3720.10 11 221 2.5E-40 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14620 23c38561183fdc6b5ad472369915347c 505 SMART SM00382 280 475 4.9E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS24095 06a8e19788f1b6dac3e40875f768063f 165 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 19 160 43.287 T 13-09-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 PMA3_RS24095 06a8e19788f1b6dac3e40875f768063f 165 PANTHER PTHR11079 11 162 2.9E-44 T 13-09-2016 PMA3_RS24095 06a8e19788f1b6dac3e40875f768063f 165 Pfam PF14437 MafB19-like deaminase 15 160 5.8E-30 T 13-09-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 PMA3_RS24095 06a8e19788f1b6dac3e40875f768063f 165 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 64 101 - T 13-09-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PMA3_RS24095 06a8e19788f1b6dac3e40875f768063f 165 SUPERFAMILY SSF53927 13 160 7.53E-55 T 13-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 PMA3_RS24095 06a8e19788f1b6dac3e40875f768063f 165 Gene3D G3DSA:3.40.140.10 10 158 3.8E-56 T 13-09-2016 PMA3_RS00835 0206f82d6362190a489beb370130a738 69 Pfam PF13499 EF-hand domain pair 3 66 6.0E-15 T 13-09-2016 IPR002048 EF-hand domain GO:0005509 PMA3_RS00835 0206f82d6362190a489beb370130a738 69 ProSitePatterns PS00018 EF-hand calcium-binding domain. 50 62 - T 13-09-2016 IPR018247 EF-Hand 1, calcium-binding site PMA3_RS00835 0206f82d6362190a489beb370130a738 69 PANTHER PTHR23050 2 68 3.4E-25 T 13-09-2016 PMA3_RS00835 0206f82d6362190a489beb370130a738 69 PANTHER PTHR23050:SF212 2 68 3.4E-25 T 13-09-2016 PMA3_RS00835 0206f82d6362190a489beb370130a738 69 SMART SM00054 41 69 9.2E-5 T 13-09-2016 IPR002048 EF-hand domain GO:0005509 PMA3_RS00835 0206f82d6362190a489beb370130a738 69 SMART SM00054 5 33 2.2E-5 T 13-09-2016 IPR002048 EF-hand domain GO:0005509 PMA3_RS00835 0206f82d6362190a489beb370130a738 69 ProSitePatterns PS00018 EF-hand calcium-binding domain. 14 26 - T 13-09-2016 IPR018247 EF-Hand 1, calcium-binding site PMA3_RS00835 0206f82d6362190a489beb370130a738 69 Gene3D G3DSA:1.10.238.10 2 67 3.4E-23 T 13-09-2016 IPR011992 EF-hand domain pair PMA3_RS00835 0206f82d6362190a489beb370130a738 69 SUPERFAMILY SSF47473 2 66 1.96E-21 T 13-09-2016 IPR011992 EF-hand domain pair PMA3_RS09800 55638072de760577d56e18ed9f27fc14 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 30 266 7.8E-47 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS09800 55638072de760577d56e18ed9f27fc14 267 Gene3D G3DSA:3.90.226.10 19 206 5.4E-48 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS09800 55638072de760577d56e18ed9f27fc14 267 PANTHER PTHR11941 30 264 4.4E-69 T 13-09-2016 PMA3_RS09800 55638072de760577d56e18ed9f27fc14 267 Gene3D G3DSA:1.10.12.10 210 267 1.1E-15 T 13-09-2016 IPR014748 Crontonase, C-terminal PMA3_RS09800 55638072de760577d56e18ed9f27fc14 267 SUPERFAMILY SSF52096 21 266 7.73E-65 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS00545 60d30a6ff050fce787315cf965779745 406 Gene3D G3DSA:3.40.50.2300 10 129 1.2E-28 T 13-09-2016 PMA3_RS00545 60d30a6ff050fce787315cf965779745 406 Pfam PF08668 HDOD domain 166 350 2.9E-36 T 13-09-2016 IPR013976 Metal-dependent hydrolase HDOD PMA3_RS00545 60d30a6ff050fce787315cf965779745 406 Gene3D G3DSA:1.10.3150.10 166 401 9.2E-33 T 13-09-2016 IPR013976 Metal-dependent hydrolase HDOD PMA3_RS00545 60d30a6ff050fce787315cf965779745 406 SMART SM00448 10 125 1.8E-22 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS00545 60d30a6ff050fce787315cf965779745 406 PANTHER PTHR26402:SF531 10 173 5.4E-32 T 13-09-2016 PMA3_RS00545 60d30a6ff050fce787315cf965779745 406 PANTHER PTHR26402 10 173 5.4E-32 T 13-09-2016 PMA3_RS00545 60d30a6ff050fce787315cf965779745 406 Pfam PF00072 Response regulator receiver domain 12 125 2.6E-19 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS00545 60d30a6ff050fce787315cf965779745 406 SUPERFAMILY SSF52172 10 129 1.71E-29 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS00545 60d30a6ff050fce787315cf965779745 406 SUPERFAMILY SSF109604 152 403 3.41E-37 T 13-09-2016 PMA3_RS24510 1e398600bed9d8191c9ccf19ccb89964 83 SUPERFAMILY SSF47336 2 78 5.89E-11 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS24510 1e398600bed9d8191c9ccf19ccb89964 83 Gene3D G3DSA:1.10.1200.10 2 77 3.5E-11 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS24510 1e398600bed9d8191c9ccf19ccb89964 83 Pfam PF00550 Phosphopantetheine attachment site 12 72 2.7E-8 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 5.2E-12 T 13-09-2016 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 5.2E-12 T 13-09-2016 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 5.2E-12 T 13-09-2016 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 5.2E-12 T 13-09-2016 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 1.3E-134 T 13-09-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 PANTHER PTHR13789 1 395 6.6E-162 T 13-09-2016 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 Gene3D G3DSA:3.50.50.60 5 183 3.4E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 Gene3D G3DSA:3.50.50.60 269 354 3.4E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 PANTHER PTHR13789:SF214 1 395 6.6E-162 T 13-09-2016 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 Pfam PF01494 FAD binding domain 5 336 1.2E-17 T 13-09-2016 IPR002938 FAD-binding domain GO:0071949 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 388 5.2E-123 T 13-09-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 SUPERFAMILY SSF51905 268 383 1.24E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29030 4637f6b4f17351b28b7f01a1b3a1684b 395 SUPERFAMILY SSF51905 5 178 1.24E-51 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS27430 ffd9a3357ce76a2d7d48a9698e6fe942 324 PANTHER PTHR34980 114 251 1.1E-34 T 13-09-2016 PMA3_RS27430 ffd9a3357ce76a2d7d48a9698e6fe942 324 PANTHER PTHR34980 2 55 1.1E-34 T 13-09-2016 PMA3_RS27430 ffd9a3357ce76a2d7d48a9698e6fe942 324 Pfam PF05656 Protein of unknown function (DUF805) 125 238 3.7E-21 T 13-09-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 PMA3_RS27430 ffd9a3357ce76a2d7d48a9698e6fe942 324 PANTHER PTHR34980:SF1 2 55 1.1E-34 T 13-09-2016 PMA3_RS27430 ffd9a3357ce76a2d7d48a9698e6fe942 324 PANTHER PTHR34980:SF1 114 251 1.1E-34 T 13-09-2016 PMA3_RS08315 83112004f6ef86024b279d6a44d3bcf9 215 PANTHER PTHR33516:SF3 120 209 1.2E-27 T 13-09-2016 PMA3_RS08315 83112004f6ef86024b279d6a44d3bcf9 215 SUPERFAMILY SSF51306 122 213 1.27E-24 T 13-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PMA3_RS08315 83112004f6ef86024b279d6a44d3bcf9 215 Gene3D G3DSA:1.10.260.40 6 62 3.1E-11 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS08315 83112004f6ef86024b279d6a44d3bcf9 215 PANTHER PTHR33516 120 209 1.2E-27 T 13-09-2016 PMA3_RS08315 83112004f6ef86024b279d6a44d3bcf9 215 SUPERFAMILY SSF47413 4 59 2.23E-9 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS08315 83112004f6ef86024b279d6a44d3bcf9 215 Pfam PF01381 Helix-turn-helix 10 61 5.8E-8 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS08315 83112004f6ef86024b279d6a44d3bcf9 215 Gene3D G3DSA:2.10.109.10 122 214 3.4E-28 T 13-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PMA3_RS08315 83112004f6ef86024b279d6a44d3bcf9 215 SMART SM00530 7 62 5.9E-9 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS08315 83112004f6ef86024b279d6a44d3bcf9 215 Pfam PF00717 Peptidase S24-like 128 198 9.5E-12 T 13-09-2016 IPR019759 Peptidase S24/S26A/S26B PMA3_RS00690 5eb3b06470d15d3837fba95aa18c2c26 455 Gene3D G3DSA:3.20.20.30 354 439 1.5E-137 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS00690 5eb3b06470d15d3837fba95aa18c2c26 455 Gene3D G3DSA:3.20.20.30 7 321 1.5E-137 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS00690 5eb3b06470d15d3837fba95aa18c2c26 455 Pfam PF00296 Luciferase-like monooxygenase 33 394 2.4E-63 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS00690 5eb3b06470d15d3837fba95aa18c2c26 455 PIRSF PIRSF000337 8 451 2.9E-142 T 13-09-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PMA3_RS00690 5eb3b06470d15d3837fba95aa18c2c26 455 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 13 436 7.4E-168 T 13-09-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PMA3_RS00690 5eb3b06470d15d3837fba95aa18c2c26 455 PANTHER PTHR30011:SF16 5 455 1.8E-238 T 13-09-2016 PMA3_RS00690 5eb3b06470d15d3837fba95aa18c2c26 455 PANTHER PTHR30011 5 455 1.8E-238 T 13-09-2016 PMA3_RS00690 5eb3b06470d15d3837fba95aa18c2c26 455 SUPERFAMILY SSF51679 8 440 3.65E-131 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS20025 72b5e176b03bb77b741ac81a1c778508 574 PANTHER PTHR34597 2 574 3.8E-120 T 13-09-2016 PMA3_RS20025 72b5e176b03bb77b741ac81a1c778508 574 PANTHER PTHR34597:SF2 2 574 3.8E-120 T 13-09-2016 PMA3_RS20025 72b5e176b03bb77b741ac81a1c778508 574 Gene3D G3DSA:2.40.160.50 195 573 5.6E-98 T 13-09-2016 PMA3_RS20025 72b5e176b03bb77b741ac81a1c778508 574 PIRSF PIRSF029745 11 574 5.5E-156 T 13-09-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 PMA3_RS20025 72b5e176b03bb77b741ac81a1c778508 574 Gene3D G3DSA:3.10.20.310 87 165 3.6E-9 T 13-09-2016 PMA3_RS20025 72b5e176b03bb77b741ac81a1c778508 574 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 184 549 1.9E-53 T 13-09-2016 IPR005565 Haemolysin activator HlyB PMA3_RS20025 72b5e176b03bb77b741ac81a1c778508 574 Pfam PF08479 POTRA domain, ShlB-type 90 165 8.4E-14 T 13-09-2016 IPR013686 Polypeptide-transport-associated, ShlB-type PMA3_RS01005 c2e512ed71d7ac5123559528e128766a 248 Gene3D G3DSA:3.40.190.10 206 247 5.4E-43 T 13-09-2016 PMA3_RS01005 c2e512ed71d7ac5123559528e128766a 248 Gene3D G3DSA:3.40.190.10 23 111 5.4E-43 T 13-09-2016 PMA3_RS01005 c2e512ed71d7ac5123559528e128766a 248 PANTHER PTHR18966:SF152 24 244 1.3E-75 T 13-09-2016 PMA3_RS01005 c2e512ed71d7ac5123559528e128766a 248 Gene3D G3DSA:3.40.190.10 113 205 1.6E-21 T 13-09-2016 PMA3_RS01005 c2e512ed71d7ac5123559528e128766a 248 SMART SM00062 25 246 9.0E-56 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS01005 c2e512ed71d7ac5123559528e128766a 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 243 9.0E-62 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS01005 c2e512ed71d7ac5123559528e128766a 248 PANTHER PTHR18966 24 244 1.3E-75 T 13-09-2016 PMA3_RS01005 c2e512ed71d7ac5123559528e128766a 248 SUPERFAMILY SSF53850 5 247 2.54E-68 T 13-09-2016 PMA3_RS24650 2cc6f0aede0b6da7d9eae5a7d1d7c5a1 391 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 81 347 6.1E-91 T 13-09-2016 IPR031811 AlgX, SGNH hydrolase-like domain KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 PANTHER PTHR23132 1 361 8.1E-171 T 13-09-2016 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 13-09-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 PIRSF PIRSF039102 1 359 7.7E-133 T 13-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 Gene3D G3DSA:3.30.1490.20 157 222 6.0E-24 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 PANTHER PTHR23132:SF8 1 361 8.1E-171 T 13-09-2016 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.559 T 13-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 Gene3D G3DSA:3.30.470.20 224 361 4.9E-53 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 13-09-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 Gene3D G3DSA:3.40.50.20 1 129 1.1E-36 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 2.9E-110 T 13-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 SUPERFAMILY SSF52440 3 139 5.66E-37 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 5.6E-77 T 13-09-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 5.3E-31 T 13-09-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS03705 9726c6740dd55c7f77977e417904bddf 364 SUPERFAMILY SSF56059 140 354 3.36E-59 T 13-09-2016 PMA3_RS04360 f345014e39e63b67e4a0aba20a8f4d67 353 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 351 5.6E-66 T 13-09-2016 IPR005495 Permease LptG/LptF-related GO:0016021 PMA3_RS04360 f345014e39e63b67e4a0aba20a8f4d67 353 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 351 1.6E-129 T 13-09-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 PMA3_RS04360 f345014e39e63b67e4a0aba20a8f4d67 353 PANTHER PTHR33529 1 352 2.0E-132 T 13-09-2016 PMA3_RS04360 f345014e39e63b67e4a0aba20a8f4d67 353 PANTHER PTHR33529:SF1 1 352 2.0E-132 T 13-09-2016 PMA3_RS20735 0eb89d785194d9fbe5f60358416d93a1 113 SUPERFAMILY SSF89946 4 108 1.07E-25 T 13-09-2016 IPR009671 Regulator of ribonuclease activity B domain PMA3_RS20735 0eb89d785194d9fbe5f60358416d93a1 113 Gene3D G3DSA:3.30.70.970 4 105 2.4E-6 T 13-09-2016 IPR009671 Regulator of ribonuclease activity B domain PMA3_RS20735 0eb89d785194d9fbe5f60358416d93a1 113 Pfam PF06877 Regulator of ribonuclease activity B 10 104 4.2E-21 T 13-09-2016 IPR009671 Regulator of ribonuclease activity B domain PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 PANTHER PTHR11019:SF90 26 45 6.6E-70 T 13-09-2016 PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 PANTHER PTHR11019:SF90 71 338 6.6E-70 T 13-09-2016 PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 SUPERFAMILY SSF52317 22 213 2.69E-42 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 SUPERFAMILY SSF46689 284 334 4.93E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 SUPERFAMILY SSF46689 232 282 5.2E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 285 327 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 Pfam PF01965 DJ-1/PfpI family 23 191 2.5E-14 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 PANTHER PTHR11019 26 45 6.6E-70 T 13-09-2016 PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 PANTHER PTHR11019 71 338 6.6E-70 T 13-09-2016 PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 Gene3D G3DSA:3.40.50.880 23 237 5.7E-40 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 Gene3D G3DSA:1.10.10.60 285 333 1.5E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 Gene3D G3DSA:1.10.10.60 238 284 2.4E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 Pfam PF12833 Helix-turn-helix domain 254 329 3.4E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS12815 07a366d6f517215c9d61fa4273600e4c 338 SMART SM00342 248 331 4.1E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS06060 dcadd12fd68edb2bc8dc00ca0db565d6 463 PANTHER PTHR11751 86 454 1.9E-116 T 13-09-2016 PMA3_RS06060 dcadd12fd68edb2bc8dc00ca0db565d6 463 PANTHER PTHR11751:SF386 86 454 1.9E-116 T 13-09-2016 PMA3_RS06060 dcadd12fd68edb2bc8dc00ca0db565d6 463 SMART SM00345 17 76 1.4E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS06060 dcadd12fd68edb2bc8dc00ca0db565d6 463 Pfam PF00155 Aminotransferase class I and II 129 445 6.7E-38 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS06060 dcadd12fd68edb2bc8dc00ca0db565d6 463 Gene3D G3DSA:1.10.10.10 4 77 4.0E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06060 dcadd12fd68edb2bc8dc00ca0db565d6 463 SUPERFAMILY SSF53383 103 452 1.36E-76 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS06060 dcadd12fd68edb2bc8dc00ca0db565d6 463 SUPERFAMILY SSF46785 11 79 2.72E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06060 dcadd12fd68edb2bc8dc00ca0db565d6 463 Gene3D G3DSA:3.40.640.10 133 353 3.5E-66 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS06060 dcadd12fd68edb2bc8dc00ca0db565d6 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.9E-11 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS23665 cd95cbd4d0aba71639d690d9fab59f48 227 PANTHER PTHR26402 1 222 1.1E-118 T 13-09-2016 PMA3_RS23665 cd95cbd4d0aba71639d690d9fab59f48 227 SMART SM00862 146 220 2.9E-18 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS23665 cd95cbd4d0aba71639d690d9fab59f48 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 220 5.2E-17 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS23665 cd95cbd4d0aba71639d690d9fab59f48 227 Gene3D G3DSA:3.40.50.2300 1 123 1.4E-41 T 13-09-2016 PMA3_RS23665 cd95cbd4d0aba71639d690d9fab59f48 227 PANTHER PTHR26402:SF552 1 222 1.1E-118 T 13-09-2016 PMA3_RS23665 cd95cbd4d0aba71639d690d9fab59f48 227 Pfam PF00072 Response regulator receiver domain 3 114 5.5E-30 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23665 cd95cbd4d0aba71639d690d9fab59f48 227 SUPERFAMILY SSF52172 1 178 2.56E-43 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS23665 cd95cbd4d0aba71639d690d9fab59f48 227 Gene3D G3DSA:1.10.10.10 125 222 4.6E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23665 cd95cbd4d0aba71639d690d9fab59f48 227 SMART SM00448 1 113 8.9E-46 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS25340 15a537d15e7a784b30c1ee8f9383d910 350 SUPERFAMILY SSF55729 115 275 1.7E-8 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS25340 15a537d15e7a784b30c1ee8f9383d910 350 Gene3D G3DSA:3.40.630.30 100 274 3.8E-4 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS25075 9c5248e679ae0d93db19b521c9515307 269 Gene3D G3DSA:3.40.50.300 5 239 9.1E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25075 9c5248e679ae0d93db19b521c9515307 269 SMART SM00382 33 222 2.7E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS25075 9c5248e679ae0d93db19b521c9515307 269 PANTHER PTHR24220 10 266 6.5E-168 T 13-09-2016 PMA3_RS25075 9c5248e679ae0d93db19b521c9515307 269 PANTHER PTHR24220:SF368 10 266 6.5E-168 T 13-09-2016 PMA3_RS25075 9c5248e679ae0d93db19b521c9515307 269 Pfam PF00005 ABC transporter 25 172 1.4E-29 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS25075 9c5248e679ae0d93db19b521c9515307 269 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS25075 9c5248e679ae0d93db19b521c9515307 269 SUPERFAMILY SSF52540 8 236 4.21E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29205 1b99c59236a531e6d0b92055a245c8b0 221 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 135 216 1.1E-18 T 13-09-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PMA3_RS29205 1b99c59236a531e6d0b92055a245c8b0 221 Gene3D G3DSA:1.10.287.460 10 108 2.3E-22 T 13-09-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PMA3_RS29205 1b99c59236a531e6d0b92055a245c8b0 221 PANTHER PTHR10516 103 216 7.6E-27 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS29205 1b99c59236a531e6d0b92055a245c8b0 221 PANTHER PTHR10516 32 76 7.6E-27 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS29205 1b99c59236a531e6d0b92055a245c8b0 221 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 16 121 8.2E-16 T 13-09-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PMA3_RS29205 1b99c59236a531e6d0b92055a245c8b0 221 SUPERFAMILY SSF54534 28 217 4.71E-42 T 13-09-2016 PMA3_RS29205 1b99c59236a531e6d0b92055a245c8b0 221 PANTHER PTHR10516:SF320 103 216 7.6E-27 T 13-09-2016 PMA3_RS29205 1b99c59236a531e6d0b92055a245c8b0 221 PANTHER PTHR10516:SF320 32 76 7.6E-27 T 13-09-2016 PMA3_RS29205 1b99c59236a531e6d0b92055a245c8b0 221 Gene3D G3DSA:3.10.50.40 109 217 4.8E-33 T 13-09-2016 PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 PANTHER PTHR30175 33 500 2.1E-118 T 13-09-2016 PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 SUPERFAMILY SSF49899 340 499 3.32E-31 T 13-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 32 469 2.1E-134 T 13-09-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 SUPERFAMILY SSF75005 33 340 1.1E-106 T 13-09-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 PANTHER PTHR30175:SF0 33 500 2.1E-118 T 13-09-2016 PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 Gene3D G3DSA:2.60.120.560 337 499 1.1E-33 T 13-09-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 SMART SM00640 39 459 5.9E-132 T 13-09-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 Gene3D G3DSA:2.115.10.20 48 336 1.0E-21 T 13-09-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 388 459 2.8E-15 T 13-09-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 39 52 - T 13-09-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 PMA3_RS22740 bf9dc69186d786942e677d758b79342a 500 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 39 340 1.6E-100 T 13-09-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal PMA3_RS30245 abc799ebac50d1ab470f3764b02e625b 435 TIGRFAM TIGR00784 citMHS: citrate transporter 1 429 6.5E-190 T 13-09-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 PMA3_RS30245 abc799ebac50d1ab470f3764b02e625b 435 PANTHER PTHR10283 9 429 1.9E-195 T 13-09-2016 PMA3_RS30245 abc799ebac50d1ab470f3764b02e625b 435 PANTHER PTHR10283:SF87 9 429 1.9E-195 T 13-09-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 PMA3_RS30245 abc799ebac50d1ab470f3764b02e625b 435 Pfam PF03600 Citrate transporter 13 377 9.9E-52 T 13-09-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PMA3_RS29975 7c4626256345df6aa165ee7c823dc6ed 208 PANTHER PTHR11260 4 194 9.3E-48 T 13-09-2016 PMA3_RS29975 7c4626256345df6aa165ee7c823dc6ed 208 SUPERFAMILY SSF52833 2 87 5.5E-26 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS29975 7c4626256345df6aa165ee7c823dc6ed 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 77 1.6E-16 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS29975 7c4626256345df6aa165ee7c823dc6ed 208 Gene3D G3DSA:3.40.30.10 4 87 8.1E-29 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS29975 7c4626256345df6aa165ee7c823dc6ed 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 136 192 1.9E-9 T 13-09-2016 IPR004046 Glutathione S-transferase, C-terminal PMA3_RS29975 7c4626256345df6aa165ee7c823dc6ed 208 SUPERFAMILY SSF47616 74 197 8.05E-29 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS29975 7c4626256345df6aa165ee7c823dc6ed 208 Gene3D G3DSA:1.20.1050.10 88 201 3.2E-31 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS26595 2d64e236bd08288012bd528f783e13e2 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 9.7E-63 T 13-09-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS26595 2d64e236bd08288012bd528f783e13e2 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 3.0E-47 T 13-09-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS26595 2d64e236bd08288012bd528f783e13e2 155 Gene3D G3DSA:3.40.1280.10 2 155 3.3E-52 T 13-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PMA3_RS26595 2d64e236bd08288012bd528f783e13e2 155 SUPERFAMILY SSF75217 2 154 9.42E-49 T 13-09-2016 IPR029028 Alpha/beta knot methyltransferases PMA3_RS26595 2d64e236bd08288012bd528f783e13e2 155 PIRSF PIRSF004505 1 155 9.2E-43 T 13-09-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS26595 2d64e236bd08288012bd528f783e13e2 155 PANTHER PTHR33603 1 155 5.7E-66 T 13-09-2016 PMA3_RS26595 2d64e236bd08288012bd528f783e13e2 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.102 T 13-09-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS26595 2d64e236bd08288012bd528f783e13e2 155 PANTHER PTHR33603:SF1 1 155 5.7E-66 T 13-09-2016 PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 Gene3D G3DSA:1.10.10.10 9 59 4.6E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 SUPERFAMILY SSF54909 70 150 2.28E-16 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 PANTHER PTHR30154 1 151 3.7E-35 T 13-09-2016 PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 1.5E-10 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 1.5E-10 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 1.5E-10 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 Pfam PF01037 Lrp/AsnC ligand binding domain 75 144 1.7E-15 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 SUPERFAMILY SSF46785 8 65 3.71E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 Pfam PF13404 AsnC-type helix-turn-helix domain 9 50 2.8E-14 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 Gene3D G3DSA:3.30.70.920 73 145 5.6E-20 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS27695 95d0af55e5e0e964e053928f62915602 153 SMART SM00344 9 115 3.1E-21 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS08270 7914237a4158c067b82bfaddde64216c 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 283 2.6E-13 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS08270 7914237a4158c067b82bfaddde64216c 289 SUPERFAMILY SSF161098 10 278 2.24E-57 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS08270 7914237a4158c067b82bfaddde64216c 289 PANTHER PTHR30193 8 284 2.3E-96 T 13-09-2016 PMA3_RS08270 7914237a4158c067b82bfaddde64216c 289 PANTHER PTHR30193:SF32 8 284 2.3E-96 T 13-09-2016 PMA3_RS08270 7914237a4158c067b82bfaddde64216c 289 Gene3D G3DSA:1.10.3720.10 15 281 9.4E-57 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS20445 9b3eb0de668c5b737a38e04b5e876706 274 PANTHER PTHR30221 1 274 7.8E-92 T 13-09-2016 PMA3_RS20445 9b3eb0de668c5b737a38e04b5e876706 274 PANTHER PTHR30221:SF7 1 274 7.8E-92 T 13-09-2016 PMA3_RS20445 9b3eb0de668c5b737a38e04b5e876706 274 SUPERFAMILY SSF50182 220 271 5.56E-6 T 13-09-2016 IPR010920 LSM domain PMA3_RS20445 9b3eb0de668c5b737a38e04b5e876706 274 Pfam PF05552 Conserved TM helix 15 60 3.0E-13 T 13-09-2016 IPR008910 Conserved TM helix PMA3_RS20445 9b3eb0de668c5b737a38e04b5e876706 274 Pfam PF05552 Conserved TM helix 109 154 4.1E-9 T 13-09-2016 IPR008910 Conserved TM helix PMA3_RS20445 9b3eb0de668c5b737a38e04b5e876706 274 Pfam PF00924 Mechanosensitive ion channel 166 271 4.2E-7 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS20445 9b3eb0de668c5b737a38e04b5e876706 274 Gene3D G3DSA:2.30.30.60 226 271 1.6E-8 T 13-09-2016 PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 SUPERFAMILY SSF75516 4 162 4.58E-28 T 13-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 PANTHER PTHR26402 177 237 1.0E-12 T 13-09-2016 PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 Gene3D G3DSA:3.30.450.80 1 178 3.7E-29 T 13-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 SUPERFAMILY SSF46894 160 238 3.3E-17 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 1.5E-8 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 1.5E-8 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 1.5E-8 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 SMART SM00421 174 231 1.5E-14 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 Pfam PF03472 Autoinducer binding domain 19 158 4.0E-23 T 13-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 Gene3D G3DSA:1.10.10.10 179 236 2.8E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03035 9b06405519351034cb63b1c03fe0c7c3 243 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 230 7.3E-15 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS01015 0cdba6dae5c345f3bc8905c385c797b6 463 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 13-09-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PMA3_RS01015 0cdba6dae5c345f3bc8905c385c797b6 463 Pfam PF00324 Amino acid permease 18 428 1.2E-113 T 13-09-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PMA3_RS01015 0cdba6dae5c345f3bc8905c385c797b6 463 TIGRFAM TIGR01773 GABAperm: GABA permease 1 452 3.8E-224 T 13-09-2016 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 PMA3_RS01015 0cdba6dae5c345f3bc8905c385c797b6 463 PANTHER PTHR11785:SF24 6 456 1.5E-244 T 13-09-2016 PMA3_RS01015 0cdba6dae5c345f3bc8905c385c797b6 463 PANTHER PTHR11785 6 456 1.5E-244 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS01015 0cdba6dae5c345f3bc8905c385c797b6 463 PIRSF PIRSF006060 1 458 4.6E-74 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS00535 295c58df37352eeaa57ac525081c8b31 480 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS00535 295c58df37352eeaa57ac525081c8b31 480 PANTHER PTHR11699 1 480 1.4E-299 T 13-09-2016 PMA3_RS00535 295c58df37352eeaa57ac525081c8b31 480 PANTHER PTHR11699:SF49 1 480 1.4E-299 T 13-09-2016 PMA3_RS00535 295c58df37352eeaa57ac525081c8b31 480 Gene3D G3DSA:3.40.605.10 10 267 2.1E-106 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS00535 295c58df37352eeaa57ac525081c8b31 480 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 474 1.3E-232 T 13-09-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 PMA3_RS00535 295c58df37352eeaa57ac525081c8b31 480 SUPERFAMILY SSF53720 5 479 8.38E-176 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS00535 295c58df37352eeaa57ac525081c8b31 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS00535 295c58df37352eeaa57ac525081c8b31 480 Gene3D G3DSA:3.40.309.10 268 451 4.3E-69 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS00535 295c58df37352eeaa57ac525081c8b31 480 Pfam PF00171 Aldehyde dehydrogenase family 19 475 3.2E-174 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS04035 d1e753ad1dc1e94bb0fc3082b6a85437 142 Pfam PF00572 Ribosomal protein L13 15 138 4.8E-57 T 13-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PMA3_RS04035 d1e753ad1dc1e94bb0fc3082b6a85437 142 Gene3D G3DSA:3.90.1180.10 3 141 1.6E-64 T 13-09-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 PMA3_RS04035 d1e753ad1dc1e94bb0fc3082b6a85437 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 8.6E-65 T 13-09-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 PMA3_RS04035 d1e753ad1dc1e94bb0fc3082b6a85437 142 PANTHER PTHR11545 1 140 1.8E-76 T 13-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PMA3_RS04035 d1e753ad1dc1e94bb0fc3082b6a85437 142 SUPERFAMILY SSF52161 1 139 2.22E-59 T 13-09-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 PMA3_RS04035 d1e753ad1dc1e94bb0fc3082b6a85437 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.963 T 13-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PMA3_RS04035 d1e753ad1dc1e94bb0fc3082b6a85437 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 13-09-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 PMA3_RS04035 d1e753ad1dc1e94bb0fc3082b6a85437 142 PIRSF PIRSF002181 1 142 3.6E-52 T 13-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 4.6E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.6E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 4.6E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 Pfam PF00106 short chain dehydrogenase 8 200 1.5E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 SUPERFAMILY SSF51735 5 250 1.56E-61 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PANTHER PTHR24322:SF428 161 192 1.1E-39 T 13-09-2016 PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PANTHER PTHR24322:SF428 11 145 1.1E-39 T 13-09-2016 PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 Gene3D G3DSA:3.40.50.720 4 249 1.2E-66 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.1E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.1E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.1E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.1E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PANTHER PTHR24322 161 192 1.1E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 PANTHER PTHR24322 11 145 1.1E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11855 7a389a29cfff4fdac7e3e2825c6e2f19 292 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 192 3.0E-6 T 13-09-2016 PMA3_RS02500 025f1a7c2f068b7bcd1c8477b170b06e 208 SUPERFAMILY SSF63965 1 205 8.5E-75 T 13-09-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 PMA3_RS02500 025f1a7c2f068b7bcd1c8477b170b06e 208 Pfam PF02570 Precorrin-8X methylmutase 10 205 1.8E-72 T 13-09-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 PMA3_RS02500 025f1a7c2f068b7bcd1c8477b170b06e 208 Gene3D G3DSA:3.40.50.10230 1 204 2.3E-81 T 13-09-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 PMA3_RS02500 025f1a7c2f068b7bcd1c8477b170b06e 208 PANTHER PTHR32439 2 203 3.8E-74 T 13-09-2016 PMA3_RS04045 f1b981cc85ea18cb4d0d05c67f4b5114 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 191 1.3E-70 T 13-09-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PMA3_RS04045 f1b981cc85ea18cb4d0d05c67f4b5114 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 150 162 2.5E-9 T 13-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PMA3_RS04045 f1b981cc85ea18cb4d0d05c67f4b5114 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 2.5E-9 T 13-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PMA3_RS04045 f1b981cc85ea18cb4d0d05c67f4b5114 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 2.5E-9 T 13-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PMA3_RS04045 f1b981cc85ea18cb4d0d05c67f4b5114 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 40 3.1E-12 T 13-09-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PMA3_RS04045 f1b981cc85ea18cb4d0d05c67f4b5114 197 SUPERFAMILY SSF50022 30 193 1.41E-42 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS04045 f1b981cc85ea18cb4d0d05c67f4b5114 197 PANTHER PTHR10134 1 195 1.0E-106 T 13-09-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 PMA3_RS04045 f1b981cc85ea18cb4d0d05c67f4b5114 197 PANTHER PTHR10134:SF8 1 195 1.0E-106 T 13-09-2016 PMA3_RS04045 f1b981cc85ea18cb4d0d05c67f4b5114 197 Pfam PF00355 Rieske [2Fe-2S] domain 55 178 2.9E-9 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS04045 f1b981cc85ea18cb4d0d05c67f4b5114 197 Gene3D G3DSA:2.102.10.10 7 194 1.2E-42 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10325 45c698916f3aa2dd3502cead58659380 313 Gene3D G3DSA:3.40.190.10 191 261 4.0E-14 T 13-09-2016 PMA3_RS10325 45c698916f3aa2dd3502cead58659380 313 PANTHER PTHR30293 1 308 4.8E-94 T 13-09-2016 PMA3_RS10325 45c698916f3aa2dd3502cead58659380 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.4E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10325 45c698916f3aa2dd3502cead58659380 313 PANTHER PTHR30293:SF0 1 308 4.8E-94 T 13-09-2016 PMA3_RS10325 45c698916f3aa2dd3502cead58659380 313 SUPERFAMILY SSF46785 2 83 2.88E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10325 45c698916f3aa2dd3502cead58659380 313 Gene3D G3DSA:1.10.10.10 2 84 2.7E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10325 45c698916f3aa2dd3502cead58659380 313 SUPERFAMILY SSF53850 87 296 2.79E-36 T 13-09-2016 PMA3_RS10325 45c698916f3aa2dd3502cead58659380 313 Pfam PF03466 LysR substrate binding domain 86 284 2.6E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS10325 45c698916f3aa2dd3502cead58659380 313 Gene3D G3DSA:3.40.190.10 86 190 1.9E-24 T 13-09-2016 PMA3_RS20970 7f29bc35ed9db1438c4606ebe3cde641 361 PANTHER PTHR21152:SF1 2 361 3.7E-188 T 13-09-2016 PMA3_RS20970 7f29bc35ed9db1438c4606ebe3cde641 361 Pfam PF00266 Aminotransferase class-V 6 348 6.7E-49 T 13-09-2016 IPR000192 Aminotransferase class V domain PMA3_RS20970 7f29bc35ed9db1438c4606ebe3cde641 361 SUPERFAMILY SSF53383 3 359 2.26E-116 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS20970 7f29bc35ed9db1438c4606ebe3cde641 361 Gene3D G3DSA:3.40.640.10 18 258 4.3E-109 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS20970 7f29bc35ed9db1438c4606ebe3cde641 361 PIRSF PIRSF000525 1 361 8.8E-149 T 13-09-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PMA3_RS20970 7f29bc35ed9db1438c4606ebe3cde641 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 6 360 1.3E-160 T 13-09-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PMA3_RS20970 7f29bc35ed9db1438c4606ebe3cde641 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 360 51.097 T 13-09-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PMA3_RS20970 7f29bc35ed9db1438c4606ebe3cde641 361 Gene3D G3DSA:3.90.1150.10 259 360 1.4E-38 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS20970 7f29bc35ed9db1438c4606ebe3cde641 361 PANTHER PTHR21152 2 361 3.7E-188 T 13-09-2016 PMA3_RS17440 c11493a213fd595e1c682a39ad2b359b 259 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 252 5.4E-89 T 13-09-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 PMA3_RS17440 c11493a213fd595e1c682a39ad2b359b 259 Gene3D G3DSA:3.40.190.10 24 112 8.1E-46 T 13-09-2016 PMA3_RS17440 c11493a213fd595e1c682a39ad2b359b 259 Gene3D G3DSA:3.40.190.10 214 256 8.1E-46 T 13-09-2016 PMA3_RS17440 c11493a213fd595e1c682a39ad2b359b 259 Gene3D G3DSA:3.40.190.10 115 212 1.4E-23 T 13-09-2016 PMA3_RS17440 c11493a213fd595e1c682a39ad2b359b 259 SUPERFAMILY SSF53850 1 256 2.96E-71 T 13-09-2016 PMA3_RS17440 c11493a213fd595e1c682a39ad2b359b 259 PANTHER PTHR18966:SF152 27 252 3.9E-65 T 13-09-2016 PMA3_RS17440 c11493a213fd595e1c682a39ad2b359b 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 13-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PMA3_RS17440 c11493a213fd595e1c682a39ad2b359b 259 PANTHER PTHR18966 27 252 3.9E-65 T 13-09-2016 PMA3_RS17440 c11493a213fd595e1c682a39ad2b359b 259 SMART SM00062 26 255 9.1E-74 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS17440 c11493a213fd595e1c682a39ad2b359b 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 253 4.5E-64 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS04030 ddafe5477279f3c8d48a9566c8eb2f8d 346 PANTHER PTHR11732 1 139 3.0E-185 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS04030 ddafe5477279f3c8d48a9566c8eb2f8d 346 PANTHER PTHR11732 157 346 3.0E-185 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS04030 ddafe5477279f3c8d48a9566c8eb2f8d 346 Pfam PF00248 Aldo/keto reductase family 16 337 4.2E-71 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS04030 ddafe5477279f3c8d48a9566c8eb2f8d 346 SUPERFAMILY SSF51430 1 345 5.11E-112 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS04030 ddafe5477279f3c8d48a9566c8eb2f8d 346 Gene3D G3DSA:3.20.20.100 1 343 1.8E-107 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS04030 ddafe5477279f3c8d48a9566c8eb2f8d 346 PANTHER PTHR11732:SF112 1 139 3.0E-185 T 13-09-2016 PMA3_RS04030 ddafe5477279f3c8d48a9566c8eb2f8d 346 PANTHER PTHR11732:SF112 157 346 3.0E-185 T 13-09-2016 PMA3_RS12360 95212d18062a2ca9392bb8918fd42cd4 369 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 13-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PMA3_RS12360 95212d18062a2ca9392bb8918fd42cd4 369 SUPERFAMILY SSF52540 4 336 1.63E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12360 95212d18062a2ca9392bb8918fd42cd4 369 Pfam PF00437 Type II/IV secretion system protein 110 246 9.5E-37 T 13-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PMA3_RS12360 95212d18062a2ca9392bb8918fd42cd4 369 PANTHER PTHR30486:SF3 1 357 5.7E-147 T 13-09-2016 PMA3_RS12360 95212d18062a2ca9392bb8918fd42cd4 369 Gene3D G3DSA:3.40.50.300 101 343 4.0E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12360 95212d18062a2ca9392bb8918fd42cd4 369 PANTHER PTHR30486 1 357 5.7E-147 T 13-09-2016 PMA3_RS12360 95212d18062a2ca9392bb8918fd42cd4 369 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 1.6E-130 T 13-09-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 PMA3_RS09170 bf9b5ce7afd46c9864a097695d6e7bb8 343 Gene3D G3DSA:1.10.3470.10 20 342 3.9E-89 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS09170 bf9b5ce7afd46c9864a097695d6e7bb8 343 PANTHER PTHR30472 28 342 7.4E-102 T 13-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PMA3_RS09170 bf9b5ce7afd46c9864a097695d6e7bb8 343 PANTHER PTHR30472:SF22 28 342 7.4E-102 T 13-09-2016 PMA3_RS09170 bf9b5ce7afd46c9864a097695d6e7bb8 343 SUPERFAMILY SSF81345 15 340 6.02E-77 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS09170 bf9b5ce7afd46c9864a097695d6e7bb8 343 Pfam PF01032 FecCD transport family 32 340 1.6E-83 T 13-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PMA3_RS00300 12715d43e0a1865f0975dba3709f9676 335 PANTHER PTHR30273:SF3 10 335 5.8E-96 T 13-09-2016 PMA3_RS00300 12715d43e0a1865f0975dba3709f9676 335 Pfam PF16220 Domain of unknown function (DUF4880) 18 60 3.0E-12 T 13-09-2016 IPR032623 FecR, N-terminal PMA3_RS00300 12715d43e0a1865f0975dba3709f9676 335 PIRSF PIRSF018266 7 334 3.6E-83 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS00300 12715d43e0a1865f0975dba3709f9676 335 Pfam PF04773 FecR protein 122 218 8.2E-11 T 13-09-2016 IPR006860 FecR protein PMA3_RS00300 12715d43e0a1865f0975dba3709f9676 335 PANTHER PTHR30273 10 335 5.8E-96 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS25395 e2d2100e1f54fea83d3c350df6e8367c 226 PANTHER PTHR41536:SF1 2 226 5.4E-123 T 13-09-2016 PMA3_RS25395 e2d2100e1f54fea83d3c350df6e8367c 226 SMART SM00702 1 177 1.7E-29 T 13-09-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 PMA3_RS25395 e2d2100e1f54fea83d3c350df6e8367c 226 SUPERFAMILY SSF51197 60 175 1.92E-5 T 13-09-2016 PMA3_RS25395 e2d2100e1f54fea83d3c350df6e8367c 226 SUPERFAMILY SSF51197 3 33 1.92E-5 T 13-09-2016 PMA3_RS25395 e2d2100e1f54fea83d3c350df6e8367c 226 PANTHER PTHR41536 2 226 5.4E-123 T 13-09-2016 PMA3_RS25395 e2d2100e1f54fea83d3c350df6e8367c 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 1.6E-12 T 13-09-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PMA3_RS25395 e2d2100e1f54fea83d3c350df6e8367c 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 45.24 T 13-09-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 Gene3D G3DSA:3.40.190.10 182 262 1.8E-14 T 13-09-2016 PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 PANTHER PTHR30126 2 305 3.6E-137 T 13-09-2016 PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 Gene3D G3DSA:3.40.190.10 89 181 7.8E-18 T 13-09-2016 PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 Pfam PF03466 LysR substrate binding domain 88 287 3.9E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.1E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.1E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.1E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 SUPERFAMILY SSF46785 2 112 4.03E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.8E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 Gene3D G3DSA:1.10.10.10 2 88 1.3E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 PANTHER PTHR30126:SF25 2 305 3.6E-137 T 13-09-2016 PMA3_RS23885 85d15738cf9ef769ec159bdcae868bd4 305 SUPERFAMILY SSF53850 89 289 4.19E-35 T 13-09-2016 PMA3_RS05835 d259d51c03be9b415cb838c48d3cc424 241 SUPERFAMILY SSF56214 121 216 1.41E-14 T 13-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PMA3_RS05835 d259d51c03be9b415cb838c48d3cc424 241 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 6.5E-19 T 13-09-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 PMA3_RS05835 d259d51c03be9b415cb838c48d3cc424 241 PRINTS PR01399 Enterobactin synthetase component D signature 168 184 6.5E-19 T 13-09-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 PMA3_RS05835 d259d51c03be9b415cb838c48d3cc424 241 PRINTS PR01399 Enterobactin synthetase component D signature 60 80 6.5E-19 T 13-09-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 PMA3_RS05835 d259d51c03be9b415cb838c48d3cc424 241 Gene3D G3DSA:3.90.470.20 123 209 4.2E-10 T 13-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PMA3_RS05835 d259d51c03be9b415cb838c48d3cc424 241 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 124 219 2.8E-10 T 13-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PMA3_RS05835 d259d51c03be9b415cb838c48d3cc424 241 PANTHER PTHR38096 1 239 4.2E-60 T 13-09-2016 PMA3_RS22485 1bf87259789837cdec6fa0643801fb99 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 13-09-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PMA3_RS22485 1bf87259789837cdec6fa0643801fb99 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 30.856 T 13-09-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PMA3_RS22485 1bf87259789837cdec6fa0643801fb99 237 Pfam PF01259 SAICAR synthetase 6 232 7.9E-63 T 13-09-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PMA3_RS22485 1bf87259789837cdec6fa0643801fb99 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 13-09-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PMA3_RS22485 1bf87259789837cdec6fa0643801fb99 237 Gene3D G3DSA:3.30.470.20 92 220 2.7E-52 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS22485 1bf87259789837cdec6fa0643801fb99 237 SUPERFAMILY SSF56104 3 233 5.56E-79 T 13-09-2016 PMA3_RS22485 1bf87259789837cdec6fa0643801fb99 237 PANTHER PTHR11609:SF2 3 235 1.1E-117 T 13-09-2016 PMA3_RS22485 1bf87259789837cdec6fa0643801fb99 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 1.2E-78 T 13-09-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PMA3_RS22485 1bf87259789837cdec6fa0643801fb99 237 Gene3D G3DSA:3.30.200.20 1 91 1.3E-33 T 13-09-2016 PMA3_RS22485 1bf87259789837cdec6fa0643801fb99 237 PANTHER PTHR11609 3 235 1.1E-117 T 13-09-2016 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 Gene3D G3DSA:3.40.190.10 275 305 8.8E-49 T 13-09-2016 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 Gene3D G3DSA:3.40.190.10 29 133 8.8E-49 T 13-09-2016 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 PIRSF PIRSF019574 1 350 3.2E-102 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 Gene3D G3DSA:3.40.190.10 135 274 1.0E-15 T 13-09-2016 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 PANTHER PTHR30222 6 349 4.9E-124 T 13-09-2016 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 Pfam PF13416 Bacterial extracellular solute-binding protein 44 301 7.2E-34 T 13-09-2016 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 SUPERFAMILY SSF53850 29 349 1.78E-77 T 13-09-2016 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 PANTHER PTHR30222:SF9 6 349 4.9E-124 T 13-09-2016 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 1.4E-36 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 1.4E-36 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 1.4E-36 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 1.4E-36 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 252 271 1.4E-36 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 1.4E-36 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS12090 8af9d854df6b3c0057cd53abf32e639a 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 208 227 1.4E-36 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS04775 97977aa19b6c29fcac30cc8ff8c24e07 863 SUPERFAMILY SSF51445 40 302 6.13E-50 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS04775 97977aa19b6c29fcac30cc8ff8c24e07 863 PANTHER PTHR10587:SF64 328 592 6.7E-83 T 13-09-2016 PMA3_RS04775 97977aa19b6c29fcac30cc8ff8c24e07 863 Pfam PF13641 Glycosyltransferase like family 2 421 649 6.4E-32 T 13-09-2016 PMA3_RS04775 97977aa19b6c29fcac30cc8ff8c24e07 863 Gene3D G3DSA:3.20.20.80 44 302 2.0E-32 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS04775 97977aa19b6c29fcac30cc8ff8c24e07 863 PANTHER PTHR10587 328 592 6.7E-83 T 13-09-2016 PMA3_RS04775 97977aa19b6c29fcac30cc8ff8c24e07 863 Gene3D G3DSA:3.90.550.10 421 668 1.6E-33 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS04775 97977aa19b6c29fcac30cc8ff8c24e07 863 SUPERFAMILY SSF53448 406 662 8.04E-50 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS14185 dd73748035441009bf4100c956fe206d 806 Gene3D G3DSA:1.20.1640.10 239 421 8.2E-25 T 13-09-2016 PMA3_RS14185 dd73748035441009bf4100c956fe206d 806 Gene3D G3DSA:1.20.1640.10 650 806 5.3E-24 T 13-09-2016 PMA3_RS14185 dd73748035441009bf4100c956fe206d 806 Pfam PF03176 MMPL family 609 803 3.9E-13 T 13-09-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PMA3_RS14185 dd73748035441009bf4100c956fe206d 806 PANTHER PTHR33406 12 117 4.9E-83 T 13-09-2016 PMA3_RS14185 dd73748035441009bf4100c956fe206d 806 PANTHER PTHR33406 152 802 4.9E-83 T 13-09-2016 PMA3_RS14185 dd73748035441009bf4100c956fe206d 806 PANTHER PTHR33406:SF2 152 802 4.9E-83 T 13-09-2016 PMA3_RS14185 dd73748035441009bf4100c956fe206d 806 PANTHER PTHR33406:SF2 12 117 4.9E-83 T 13-09-2016 PMA3_RS14185 dd73748035441009bf4100c956fe206d 806 SUPERFAMILY SSF82866 240 414 2.22E-24 T 13-09-2016 PMA3_RS14185 dd73748035441009bf4100c956fe206d 806 SUPERFAMILY SSF82866 657 805 3.4E-30 T 13-09-2016 PMA3_RS28460 6e60aaa53c43e5eca51c6418630d3d3b 143 Pfam PF05154 TM2 domain 14 60 4.6E-16 T 13-09-2016 IPR007829 TM2 domain PMA3_RS28460 6e60aaa53c43e5eca51c6418630d3d3b 143 Pfam PF05154 TM2 domain 80 125 2.0E-14 T 13-09-2016 IPR007829 TM2 domain PMA3_RS28460 6e60aaa53c43e5eca51c6418630d3d3b 143 PANTHER PTHR21016 12 76 1.1E-24 T 13-09-2016 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 PANTHER PTHR11748 248 584 1.3E-134 T 13-09-2016 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 Gene3D G3DSA:3.30.43.10 2 108 1.6E-20 T 13-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 Pfam PF01565 FAD binding domain 52 190 2.6E-32 T 13-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 Gene3D G3DSA:3.30.465.10 110 281 2.5E-37 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 Gene3D G3DSA:1.10.1060.10 650 701 1.2E-14 T 13-09-2016 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 Gene3D G3DSA:1.10.1060.10 512 616 1.2E-14 T 13-09-2016 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 PANTHER PTHR11748 16 198 1.3E-134 T 13-09-2016 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 SUPERFAMILY SSF55103 260 535 4.74E-50 T 13-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 Pfam PF02913 FAD linked oxidases, C-terminal domain 285 534 2.2E-55 T 13-09-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 SUPERFAMILY SSF46548 652 687 8.55E-7 T 13-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 SUPERFAMILY SSF46548 562 619 8.55E-7 T 13-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 Pfam PF13183 4Fe-4S dicluster domain 574 683 6.9E-12 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 669 680 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 PANTHER PTHR11748:SF35 16 198 1.3E-134 T 13-09-2016 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 PANTHER PTHR11748:SF35 248 584 1.3E-134 T 13-09-2016 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 SUPERFAMILY SSF56176 246 281 9.81E-47 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS14125 35168c5d1e63af1a7b39418f7aa95eaf 1025 SUPERFAMILY SSF56176 10 194 9.81E-47 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS04285 4145f65dfa5e854ad5be7f05e7167a7a 254 SMART SM00382 39 226 2.0E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS04285 4145f65dfa5e854ad5be7f05e7167a7a 254 PIRSF PIRSF039085 11 254 5.4E-109 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS04285 4145f65dfa5e854ad5be7f05e7167a7a 254 Gene3D G3DSA:3.40.50.300 14 250 1.3E-84 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04285 4145f65dfa5e854ad5be7f05e7167a7a 254 PANTHER PTHR24220:SF490 16 254 3.4E-177 T 13-09-2016 PMA3_RS04285 4145f65dfa5e854ad5be7f05e7167a7a 254 SUPERFAMILY SSF52540 14 248 1.19E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04285 4145f65dfa5e854ad5be7f05e7167a7a 254 PANTHER PTHR24220 16 254 3.4E-177 T 13-09-2016 PMA3_RS04285 4145f65dfa5e854ad5be7f05e7167a7a 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS04285 4145f65dfa5e854ad5be7f05e7167a7a 254 Pfam PF00005 ABC transporter 30 178 2.1E-38 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS11865 b07f366109e81b9175ae59ae3f7a4d92 156 Gene3D G3DSA:3.10.129.10 21 135 9.1E-29 T 13-09-2016 IPR029069 HotDog domain PMA3_RS11865 b07f366109e81b9175ae59ae3f7a4d92 156 Pfam PF01575 MaoC like domain 22 132 2.8E-23 T 13-09-2016 IPR002539 MaoC-like domain PMA3_RS11865 b07f366109e81b9175ae59ae3f7a4d92 156 PANTHER PTHR13078 22 143 1.2E-33 T 13-09-2016 PMA3_RS11865 b07f366109e81b9175ae59ae3f7a4d92 156 SUPERFAMILY SSF54637 15 146 4.59E-30 T 13-09-2016 IPR029069 HotDog domain PMA3_RS25595 75f829006005fa8181c7503aa7cd3589 134 SUPERFAMILY SSF46785 6 131 7.66E-38 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25595 75f829006005fa8181c7503aa7cd3589 134 PANTHER PTHR33202 6 129 1.2E-36 T 13-09-2016 PMA3_RS25595 75f829006005fa8181c7503aa7cd3589 134 Gene3D G3DSA:1.10.10.10 5 81 5.8E-30 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25595 75f829006005fa8181c7503aa7cd3589 134 Pfam PF01475 Ferric uptake regulator family 9 129 1.2E-41 T 13-09-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PMA3_RS07250 d3e0e71f6f3d0c57ce514cc3a58a0bcb 265 Gene3D G3DSA:3.40.190.10 218 255 3.8E-4 T 13-09-2016 PMA3_RS07250 d3e0e71f6f3d0c57ce514cc3a58a0bcb 265 Gene3D G3DSA:3.40.190.10 29 114 3.8E-4 T 13-09-2016 PMA3_RS07250 d3e0e71f6f3d0c57ce514cc3a58a0bcb 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 127 255 4.5E-6 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS07250 d3e0e71f6f3d0c57ce514cc3a58a0bcb 265 SUPERFAMILY SSF53850 28 255 1.43E-22 T 13-09-2016 PMA3_RS20455 ac87083e9fbcd5b59d83455bf8f544a4 331 Gene3D G3DSA:1.20.58.340 256 331 2.9E-23 T 13-09-2016 PMA3_RS20455 ac87083e9fbcd5b59d83455bf8f544a4 331 SUPERFAMILY SSF143865 8 258 5.1E-44 T 13-09-2016 PMA3_RS20455 ac87083e9fbcd5b59d83455bf8f544a4 331 SUPERFAMILY SSF144083 266 328 4.97E-16 T 13-09-2016 PMA3_RS20455 ac87083e9fbcd5b59d83455bf8f544a4 331 Gene3D G3DSA:1.20.58.340 148 252 6.7E-8 T 13-09-2016 PMA3_RS20455 ac87083e9fbcd5b59d83455bf8f544a4 331 Pfam PF01544 CorA-like Mg2+ transporter protein 41 327 4.4E-62 T 13-09-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PMA3_RS20455 ac87083e9fbcd5b59d83455bf8f544a4 331 PANTHER PTHR21535 71 331 1.7E-32 T 13-09-2016 PMA3_RS24925 8cab0a7c53d87c552f1e45f4a0d7c1b7 277 PANTHER PTHR18966 32 270 1.9E-24 T 13-09-2016 PMA3_RS24925 8cab0a7c53d87c552f1e45f4a0d7c1b7 277 SUPERFAMILY SSF53850 6 272 2.12E-53 T 13-09-2016 PMA3_RS24925 8cab0a7c53d87c552f1e45f4a0d7c1b7 277 PANTHER PTHR18966:SF191 32 270 1.9E-24 T 13-09-2016 PMA3_RS24925 8cab0a7c53d87c552f1e45f4a0d7c1b7 277 SMART SM00062 36 272 4.2E-34 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS24925 8cab0a7c53d87c552f1e45f4a0d7c1b7 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 270 2.5E-48 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS24925 8cab0a7c53d87c552f1e45f4a0d7c1b7 277 Gene3D G3DSA:3.40.190.10 124 225 3.7E-11 T 13-09-2016 PMA3_RS24925 8cab0a7c53d87c552f1e45f4a0d7c1b7 277 Gene3D G3DSA:3.40.190.10 231 274 1.2E-35 T 13-09-2016 PMA3_RS24925 8cab0a7c53d87c552f1e45f4a0d7c1b7 277 Gene3D G3DSA:3.40.190.10 33 122 1.2E-35 T 13-09-2016 PMA3_RS19010 88ba0366f6cd0880038d00fa843dbe55 287 PANTHER PTHR35563:SF1 7 287 1.2E-66 T 13-09-2016 PMA3_RS19010 88ba0366f6cd0880038d00fa843dbe55 287 Pfam PF04909 Amidohydrolase 24 286 8.7E-44 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS19010 88ba0366f6cd0880038d00fa843dbe55 287 Gene3D G3DSA:3.20.20.140 3 286 1.8E-100 T 13-09-2016 PMA3_RS19010 88ba0366f6cd0880038d00fa843dbe55 287 PANTHER PTHR35563 7 287 1.2E-66 T 13-09-2016 PMA3_RS19010 88ba0366f6cd0880038d00fa843dbe55 287 SUPERFAMILY SSF51556 18 286 1.02E-75 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS23455 37057fc3d8552e314b14dacc2f7b07fe 249 SUPERFAMILY SSF52096 2 248 5.74E-67 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS23455 37057fc3d8552e314b14dacc2f7b07fe 249 Gene3D G3DSA:3.90.226.10 3 247 7.1E-71 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS23455 37057fc3d8552e314b14dacc2f7b07fe 249 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 237 2.0E-46 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS23455 37057fc3d8552e314b14dacc2f7b07fe 249 PANTHER PTHR11941 5 248 2.0E-85 T 13-09-2016 PMA3_RS23455 37057fc3d8552e314b14dacc2f7b07fe 249 PANTHER PTHR11941:SF17 5 248 2.0E-85 T 13-09-2016 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 PANTHER PTHR23305:SF12 1 366 4.9E-204 T 13-09-2016 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 Gene3D G3DSA:3.40.50.300 4 130 2.3E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 Gene3D G3DSA:3.40.50.300 203 269 2.3E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 45.017 T 13-09-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 SUPERFAMILY SSF81271 282 363 9.81E-38 T 13-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 Gene3D G3DSA:3.10.20.30 270 366 1.1E-50 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 4.0E-41 T 13-09-2016 IPR013029 Domain of unknown function DUF933 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 2.4E-157 T 13-09-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 PIRSF PIRSF006641 1 366 2.3E-157 T 13-09-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 7.9E-33 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 7.9E-33 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 7.9E-33 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 7.9E-33 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 SUPERFAMILY SSF52540 3 304 6.9E-80 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 PANTHER PTHR23305 1 366 4.9E-204 T 13-09-2016 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 Pfam PF01926 50S ribosome-binding GTPase 5 119 4.9E-22 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS03725 1e68b1308631e7cd187fc437f5d5f3d7 366 Gene3D G3DSA:1.10.150.300 131 202 6.5E-24 T 13-09-2016 IPR023192 TGS-like domain PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 Gene3D G3DSA:1.20.140.10 227 389 1.1E-42 T 13-09-2016 PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 227 2.9E-21 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 SUPERFAMILY SSF47203 242 391 7.57E-42 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 PANTHER PTHR10909:SF307 1 392 5.5E-262 T 13-09-2016 PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 Gene3D G3DSA:2.40.110.10 135 226 3.0E-31 T 13-09-2016 PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 5.1E-34 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 Gene3D G3DSA:1.10.540.10 5 134 1.7E-40 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 385 5.2E-28 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 PANTHER PTHR10909 1 392 5.5E-262 T 13-09-2016 PMA3_RS18650 e8413d6ce7cfb7167f9184e8253784b1 393 SUPERFAMILY SSF56645 7 238 2.09E-74 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 SUPERFAMILY SSF53774 1 314 4.58E-79 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 SMART SM00870 5 321 6.6E-90 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 PRINTS PR00139 Asparaginase/glutaminase family signature 255 273 7.1E-10 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 PRINTS PR00139 Asparaginase/glutaminase family signature 82 100 7.1E-10 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 7.1E-10 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 Gene3D G3DSA:3.40.50.1170 2 200 3.9E-50 T 13-09-2016 IPR027474 L-asparaginase, N-terminal PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 PANTHER PTHR11707:SF29 3 311 3.5E-42 T 13-09-2016 PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 Gene3D G3DSA:3.40.50.40 210 314 7.3E-20 T 13-09-2016 IPR027473 L-asparaginase, C-terminal domain PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 PIRSF PIRSF001220 1 324 3.1E-77 T 13-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 PANTHER PTHR11707 3 311 3.5E-42 T 13-09-2016 PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 Pfam PF00710 Asparaginase, N-terminal 6 194 1.8E-46 T 13-09-2016 IPR027474 L-asparaginase, N-terminal PMA3_RS04000 d2be2efacd7e1568add93ee5d8e8f459 326 PIRSF PIRSF500176 2 326 4.9E-71 T 13-09-2016 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 SUPERFAMILY SSF53901 271 391 2.11E-39 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 Gene3D G3DSA:3.40.47.10 185 274 9.3E-61 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 Gene3D G3DSA:3.40.47.10 3 125 9.3E-61 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 Pfam PF02803 Thiolase, C-terminal domain 270 391 2.4E-45 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 13-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 SUPERFAMILY SSF53901 1 266 9.02E-73 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 PANTHER PTHR18919:SF14 1 394 1.1E-194 T 13-09-2016 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 4.6E-132 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 Gene3D G3DSA:3.40.47.10 145 184 6.9E-61 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 Gene3D G3DSA:3.40.47.10 277 391 6.9E-61 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 PANTHER PTHR18919 1 394 1.1E-194 T 13-09-2016 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 PIRSF PIRSF000429 1 394 3.2E-121 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 13-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PMA3_RS06885 3a60f50ed8ad3d31ca669563418e5e49 394 Pfam PF00108 Thiolase, N-terminal domain 4 261 7.3E-67 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS21615 2b626b26224678a740993ca335cbe3c2 443 PANTHER PTHR11564:SF3 131 430 2.0E-66 T 13-09-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 PMA3_RS21615 2b626b26224678a740993ca335cbe3c2 443 Gene3D G3DSA:3.40.50.300 236 412 1.2E-40 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21615 2b626b26224678a740993ca335cbe3c2 443 SUPERFAMILY SSF52540 220 412 2.46E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21615 2b626b26224678a740993ca335cbe3c2 443 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 311 1.5E-74 T 13-09-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 PMA3_RS21615 2b626b26224678a740993ca335cbe3c2 443 PANTHER PTHR11564 131 430 2.0E-66 T 13-09-2016 PMA3_RS21615 2b626b26224678a740993ca335cbe3c2 443 Gene3D G3DSA:1.20.120.140 196 235 1.9E-6 T 13-09-2016 PMA3_RS21615 2b626b26224678a740993ca335cbe3c2 443 SMART SM00382 222 392 1.6E-7 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS21615 2b626b26224678a740993ca335cbe3c2 443 SMART SM00962 223 415 4.6E-50 T 13-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS21615 2b626b26224678a740993ca335cbe3c2 443 Pfam PF00448 SRP54-type protein, GTPase domain 225 413 5.3E-46 T 13-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 SUPERFAMILY SSF56003 43 226 1.92E-32 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 SUPERFAMILY SSF46626 944 1059 1.52E-13 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 PANTHER PTHR11908 69 747 1.2E-297 T 13-09-2016 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Gene3D G3DSA:1.10.760.10 946 1054 2.7E-8 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Gene3D G3DSA:1.10.760.10 802 904 4.1E-15 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 PANTHER PTHR11908:SF22 69 747 1.2E-297 T 13-09-2016 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Gene3D G3DSA:3.30.365.10 47 184 5.8E-32 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Gene3D G3DSA:3.30.365.10 521 742 1.7E-54 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 SUPERFAMILY SSF56003 309 741 1.4E-115 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 SUPERFAMILY SSF54665 203 288 3.19E-8 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Pfam PF00034 Cytochrome c 805 904 4.3E-7 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 SMART SM01008 202 288 8.8E-19 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Gene3D G3DSA:3.30.365.10 326 427 3.5E-20 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Gene3D G3DSA:3.30.365.10 276 325 4.6E-6 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Gene3D G3DSA:3.30.365.10 432 464 4.6E-6 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 SUPERFAMILY SSF46626 791 927 8.22E-24 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Gene3D G3DSA:3.90.1170.50 185 275 2.8E-21 T 13-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 SUPERFAMILY SSF46626 1068 1172 1.28E-16 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 1080 1161 3.4E-10 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 46 167 3.5E-21 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 309 552 4.7E-30 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 595 685 1.6E-14 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS12595 4202a225bdfdf8661d89b35ef94c1952 1189 Gene3D G3DSA:1.10.760.10 1068 1166 1.6E-15 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS09140 9373dcd13c95ed298bf3c99f1ca31887 475 PANTHER PTHR23501 7 469 1.7E-93 T 13-09-2016 PMA3_RS09140 9373dcd13c95ed298bf3c99f1ca31887 475 Gene3D G3DSA:1.20.1250.20 266 459 3.0E-15 T 13-09-2016 PMA3_RS09140 9373dcd13c95ed298bf3c99f1ca31887 475 SUPERFAMILY SSF103473 6 199 5.23E-60 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS09140 9373dcd13c95ed298bf3c99f1ca31887 475 SUPERFAMILY SSF103473 246 461 5.23E-60 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS09140 9373dcd13c95ed298bf3c99f1ca31887 475 Pfam PF07690 Major Facilitator Superfamily 14 406 6.0E-47 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS09140 9373dcd13c95ed298bf3c99f1ca31887 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 412 1.5E-80 T 13-09-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 PMA3_RS09140 9373dcd13c95ed298bf3c99f1ca31887 475 Gene3D G3DSA:1.20.1250.20 7 192 6.8E-29 T 13-09-2016 PMA3_RS02940 4676c28f9bce109aa60c103151f8cb9b 292 PANTHER PTHR22911 10 291 6.4E-104 T 13-09-2016 PMA3_RS02940 4676c28f9bce109aa60c103151f8cb9b 292 SUPERFAMILY SSF103481 194 290 4.32E-13 T 13-09-2016 PMA3_RS02940 4676c28f9bce109aa60c103151f8cb9b 292 Pfam PF00892 EamA-like transporter family 157 280 4.1E-8 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS02940 4676c28f9bce109aa60c103151f8cb9b 292 Pfam PF00892 EamA-like transporter family 15 147 1.3E-16 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS02940 4676c28f9bce109aa60c103151f8cb9b 292 SUPERFAMILY SSF103481 53 151 8.76E-16 T 13-09-2016 PMA3_RS02940 4676c28f9bce109aa60c103151f8cb9b 292 PANTHER PTHR22911:SF70 10 291 6.4E-104 T 13-09-2016 PMA3_RS19955 9dd698624e987de9316a806b0abc6123 222 Pfam PF00072 Response regulator receiver domain 4 112 1.9E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS19955 9dd698624e987de9316a806b0abc6123 222 SUPERFAMILY SSF46894 122 217 7.37E-25 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS19955 9dd698624e987de9316a806b0abc6123 222 PANTHER PTHR26402:SF279 1 218 1.9E-124 T 13-09-2016 PMA3_RS19955 9dd698624e987de9316a806b0abc6123 222 SMART SM00448 1 112 2.9E-38 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS19955 9dd698624e987de9316a806b0abc6123 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 217 2.9E-21 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS19955 9dd698624e987de9316a806b0abc6123 222 Gene3D G3DSA:3.40.50.2300 1 123 1.1E-33 T 13-09-2016 PMA3_RS19955 9dd698624e987de9316a806b0abc6123 222 PANTHER PTHR26402 1 218 1.9E-124 T 13-09-2016 PMA3_RS19955 9dd698624e987de9316a806b0abc6123 222 Gene3D G3DSA:1.10.10.10 124 217 1.9E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19955 9dd698624e987de9316a806b0abc6123 222 SUPERFAMILY SSF52172 1 118 6.83E-37 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS19955 9dd698624e987de9316a806b0abc6123 222 SMART SM00862 146 217 2.7E-24 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS25050 c10dabd760f82ce63bd3e9d02ece96a8 79 Gene3D G3DSA:3.30.300.90 2 78 1.4E-17 T 13-09-2016 IPR002634 BolA protein PMA3_RS25050 c10dabd760f82ce63bd3e9d02ece96a8 79 Pfam PF01722 BolA-like protein 23 70 2.2E-7 T 13-09-2016 IPR002634 BolA protein PMA3_RS25050 c10dabd760f82ce63bd3e9d02ece96a8 79 SUPERFAMILY SSF82657 2 77 1.07E-19 T 13-09-2016 IPR002634 BolA protein PMA3_RS25050 c10dabd760f82ce63bd3e9d02ece96a8 79 PIRSF PIRSF003113 1 79 1.2E-13 T 13-09-2016 IPR002634 BolA protein PMA3_RS12520 e20c2175c7cd7c7c60cb34b84eeaa826 455 SUPERFAMILY SSF159501 25 435 8.72E-132 T 13-09-2016 PMA3_RS12520 e20c2175c7cd7c7c60cb34b84eeaa826 455 PANTHER PTHR31299 24 455 1.3E-149 T 13-09-2016 PMA3_RS12520 e20c2175c7cd7c7c60cb34b84eeaa826 455 Gene3D G3DSA:3.40.1660.10 21 81 6.9E-72 T 13-09-2016 PMA3_RS12520 e20c2175c7cd7c7c60cb34b84eeaa826 455 Gene3D G3DSA:3.40.1660.10 291 435 6.9E-72 T 13-09-2016 PMA3_RS12520 e20c2175c7cd7c7c60cb34b84eeaa826 455 PIRSF PIRSF036794 1 442 1.2E-147 T 13-09-2016 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type PMA3_RS12520 e20c2175c7cd7c7c60cb34b84eeaa826 455 Gene3D G3DSA:3.30.1870.10 82 159 7.8E-27 T 13-09-2016 PMA3_RS12520 e20c2175c7cd7c7c60cb34b84eeaa826 455 PANTHER PTHR31299:SF2 24 455 1.3E-149 T 13-09-2016 PMA3_RS12520 e20c2175c7cd7c7c60cb34b84eeaa826 455 Pfam PF05139 Erythromycin esterase 80 430 2.2E-116 T 13-09-2016 IPR007815 Erythromycin esterase GO:0046677 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 Pfam PF00108 Thiolase, N-terminal domain 4 265 1.6E-61 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 PANTHER PTHR18919:SF91 1 400 8.5E-198 T 13-09-2016 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 PANTHER PTHR18919 1 400 8.5E-198 T 13-09-2016 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 Gene3D G3DSA:3.40.47.10 152 197 1.2E-55 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 Gene3D G3DSA:3.40.47.10 281 398 1.2E-55 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 13-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 Pfam PF02803 Thiolase, C-terminal domain 274 398 1.6E-43 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 SUPERFAMILY SSF53901 275 398 2.88E-43 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 13-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 Gene3D G3DSA:3.40.47.10 198 280 3.2E-58 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 Gene3D G3DSA:3.40.47.10 3 123 3.2E-58 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 PIRSF PIRSF000429 1 400 9.1E-126 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 SUPERFAMILY SSF53901 2 274 6.25E-67 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 13-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PMA3_RS18655 e6e5d714c7a7abb62434d7fa35db2ec2 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 397 9.6E-129 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS18425 046925311afa8031930f9ffc157d091b 336 PANTHER PTHR10366 292 333 9.5E-62 T 13-09-2016 PMA3_RS18425 046925311afa8031930f9ffc157d091b 336 SUPERFAMILY SSF51735 1 264 1.33E-59 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18425 046925311afa8031930f9ffc157d091b 336 SUPERFAMILY SSF51735 293 331 1.33E-59 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18425 046925311afa8031930f9ffc157d091b 336 PANTHER PTHR10366:SF124 292 333 9.5E-62 T 13-09-2016 PMA3_RS18425 046925311afa8031930f9ffc157d091b 336 Gene3D G3DSA:3.40.50.720 4 328 8.0E-50 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18425 046925311afa8031930f9ffc157d091b 336 PANTHER PTHR10366 3 264 9.5E-62 T 13-09-2016 PMA3_RS18425 046925311afa8031930f9ffc157d091b 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 232 2.5E-22 T 13-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PMA3_RS18425 046925311afa8031930f9ffc157d091b 336 PANTHER PTHR10366:SF124 3 264 9.5E-62 T 13-09-2016 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 Gene3D G3DSA:3.40.190.10 146 314 2.9E-63 T 13-09-2016 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PANTHER PTHR30222:SF11 1 365 3.5E-194 T 13-09-2016 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 SUPERFAMILY SSF53850 25 364 2.32E-99 T 13-09-2016 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 Gene3D G3DSA:3.40.190.10 40 145 1.6E-11 T 13-09-2016 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 7.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 7.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 7.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 7.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 90 103 7.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 74 88 7.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 7.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 7.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 7.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 7.9E-66 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PANTHER PTHR30222 1 365 3.5E-194 T 13-09-2016 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 Pfam PF13416 Bacterial extracellular solute-binding protein 41 330 8.2E-30 T 13-09-2016 PMA3_RS28885 d2d6cd1ca2cd17daf56c6b5390fdba53 365 PIRSF PIRSF019574 1 365 1.0E-136 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS15140 c75bae81c6b51b81b36bf066b37b9637 477 Pfam PF00155 Aminotransferase class I and II 145 363 1.6E-14 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS15140 c75bae81c6b51b81b36bf066b37b9637 477 Gene3D G3DSA:1.10.10.10 9 79 8.1E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15140 c75bae81c6b51b81b36bf066b37b9637 477 SUPERFAMILY SSF46785 9 80 5.44E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15140 c75bae81c6b51b81b36bf066b37b9637 477 Gene3D G3DSA:3.40.640.10 154 364 1.7E-59 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS15140 c75bae81c6b51b81b36bf066b37b9637 477 PANTHER PTHR11751 94 475 1.5E-108 T 13-09-2016 PMA3_RS15140 c75bae81c6b51b81b36bf066b37b9637 477 PANTHER PTHR11751:SF287 94 475 1.5E-108 T 13-09-2016 PMA3_RS15140 c75bae81c6b51b81b36bf066b37b9637 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.5E-13 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS15140 c75bae81c6b51b81b36bf066b37b9637 477 SUPERFAMILY SSF53383 114 475 1.14E-83 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS15140 c75bae81c6b51b81b36bf066b37b9637 477 SMART SM00345 17 76 2.2E-11 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 1.3E-47 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 SUPERFAMILY SSF51905 192 321 9.72E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 SUPERFAMILY SSF51905 2 162 9.72E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 1.2E-19 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 1.2E-19 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 1.2E-19 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.2E-19 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.2E-19 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 3.4E-13 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.4E-13 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 357 372 3.4E-13 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 3.4E-13 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 3.4E-13 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 Gene3D G3DSA:3.50.50.60 3 106 2.7E-15 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 Gene3D G3DSA:3.50.50.60 107 301 2.8E-38 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PANTHER PTHR22912:SF130 3 374 8.5E-142 T 13-09-2016 PMA3_RS29640 b963830a69e23556367ed9dd30a88184 382 PANTHER PTHR22912 3 374 8.5E-142 T 13-09-2016 PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 SUPERFAMILY SSF53187 336 412 2.57E-55 T 13-09-2016 PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 SUPERFAMILY SSF53187 33 224 2.57E-55 T 13-09-2016 PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 Gene3D G3DSA:3.30.70.360 216 320 7.7E-28 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 SUPERFAMILY SSF55031 215 327 9.94E-24 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 PANTHER PTHR11014 25 411 2.8E-94 T 13-09-2016 PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 PIRSF PIRSF037238 32 411 9.3E-112 T 13-09-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 Gene3D G3DSA:3.40.630.10 32 215 9.4E-57 T 13-09-2016 PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 Gene3D G3DSA:3.40.630.10 325 412 9.4E-57 T 13-09-2016 PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 109 118 - T 13-09-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 PANTHER PTHR11014:SF64 25 411 2.8E-94 T 13-09-2016 PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 Pfam PF01546 Peptidase family M20/M25/M40 110 408 2.0E-29 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS17470 d1a9a7b94dc5b89e3891576d3a0964a4 413 Pfam PF07687 Peptidase dimerisation domain 214 311 3.2E-22 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS12450 f4665c34a409301d3df5b37b22a881fa 320 Pfam PF00582 Universal stress protein family 174 300 5.9E-14 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS12450 f4665c34a409301d3df5b37b22a881fa 320 PANTHER PTHR31964 245 315 7.6E-13 T 13-09-2016 PMA3_RS12450 f4665c34a409301d3df5b37b22a881fa 320 PANTHER PTHR31964 1 90 7.6E-13 T 13-09-2016 PMA3_RS12450 f4665c34a409301d3df5b37b22a881fa 320 SUPERFAMILY SSF52402 4 145 6.2E-12 T 13-09-2016 PMA3_RS12450 f4665c34a409301d3df5b37b22a881fa 320 SUPERFAMILY SSF52402 155 301 5.19E-20 T 13-09-2016 PMA3_RS12450 f4665c34a409301d3df5b37b22a881fa 320 Gene3D G3DSA:3.40.50.620 3 145 9.9E-9 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS12450 f4665c34a409301d3df5b37b22a881fa 320 Gene3D G3DSA:3.40.50.620 154 301 8.2E-21 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS12450 f4665c34a409301d3df5b37b22a881fa 320 PANTHER PTHR31964:SF41 245 315 7.6E-13 T 13-09-2016 PMA3_RS12450 f4665c34a409301d3df5b37b22a881fa 320 PANTHER PTHR31964:SF41 1 90 7.6E-13 T 13-09-2016 PMA3_RS04040 e48897ad351844bd7e899f0f9a777c7f 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 13-09-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 PMA3_RS04040 e48897ad351844bd7e899f0f9a777c7f 130 PANTHER PTHR21569 1 130 3.8E-72 T 13-09-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PMA3_RS04040 e48897ad351844bd7e899f0f9a777c7f 130 SUPERFAMILY SSF54211 6 130 3.72E-48 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS04040 e48897ad351844bd7e899f0f9a777c7f 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 8.5E-48 T 13-09-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PMA3_RS04040 e48897ad351844bd7e899f0f9a777c7f 130 Gene3D G3DSA:3.30.230.10 5 130 2.2E-51 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS04040 e48897ad351844bd7e899f0f9a777c7f 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.434 T 13-09-2016 IPR023035 Ribosomal protein S9, bacterial/plastid PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 Gene3D G3DSA:1.10.8.280 158 285 1.9E-26 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 PANTHER PTHR32282:SF4 373 585 0.0 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 PANTHER PTHR32282:SF4 11 326 0.0 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 SUPERFAMILY SSF52540 265 285 2.79E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 SUPERFAMILY SSF52540 355 494 2.79E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 SUPERFAMILY SSF52540 14 97 2.79E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 ProSitePatterns PS00211 ABC transporters family signature. 765 779 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 Gene3D G3DSA:1.20.1580.10 103 156 1.5E-30 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 Gene3D G3DSA:1.20.1580.10 372 402 1.5E-30 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 Gene3D G3DSA:1.20.1580.10 286 325 1.5E-30 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 SUPERFAMILY SSF52540 619 848 5.59E-45 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 SUPERFAMILY SSF52540 541 583 5.59E-45 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 PANTHER PTHR32282 373 585 0.0 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 PANTHER PTHR32282 609 875 0.0 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 PANTHER PTHR32282 11 326 0.0 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 Gene3D G3DSA:3.40.50.300 527 593 6.4E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 Gene3D G3DSA:3.40.50.300 5 61 2.8E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 Gene3D G3DSA:3.40.50.300 403 520 2.8E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 Gene3D G3DSA:3.40.50.300 756 873 6.4E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 Gene3D G3DSA:1.20.1580.10 629 755 7.5E-48 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 PANTHER PTHR32282:SF4 609 875 0.0 T 13-09-2016 PMA3_RS12120 bbb81d07c6d4a5eaef35305c35c78b9c 878 Pfam PF00005 ABC transporter 545 795 9.3E-8 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS08950 8405e5f84962baa53fac121dce42b8dd 145 Gene3D G3DSA:3.10.129.10 3 138 2.7E-33 T 13-09-2016 IPR029069 HotDog domain PMA3_RS08950 8405e5f84962baa53fac121dce42b8dd 145 PANTHER PTHR31793:SF6 8 135 4.4E-71 T 13-09-2016 PMA3_RS08950 8405e5f84962baa53fac121dce42b8dd 145 PANTHER PTHR31793 8 135 4.4E-71 T 13-09-2016 PMA3_RS08950 8405e5f84962baa53fac121dce42b8dd 145 SUPERFAMILY SSF54637 3 140 9.45E-38 T 13-09-2016 IPR029069 HotDog domain PMA3_RS08950 8405e5f84962baa53fac121dce42b8dd 145 Pfam PF13279 Thioesterase-like superfamily 15 134 5.5E-12 T 13-09-2016 PMA3_RS08830 2da4e8b0c814ba7a4267addb1033b594 583 PANTHER PTHR41533 1 578 3.2E-102 T 13-09-2016 PMA3_RS08830 2da4e8b0c814ba7a4267addb1033b594 583 Gene3D G3DSA:1.10.101.10 233 314 8.6E-17 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS08830 2da4e8b0c814ba7a4267addb1033b594 583 Pfam PF01471 Putative peptidoglycan binding domain 249 305 5.0E-9 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS08830 2da4e8b0c814ba7a4267addb1033b594 583 Pfam PF03734 L,D-transpeptidase catalytic domain 334 493 6.5E-30 T 13-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 PMA3_RS08830 2da4e8b0c814ba7a4267addb1033b594 583 SUPERFAMILY SSF47090 233 313 1.96E-14 T 13-09-2016 IPR002477 Peptidoglycan binding-like PMA3_RS08830 2da4e8b0c814ba7a4267addb1033b594 583 PANTHER PTHR41533:SF1 1 578 3.2E-102 T 13-09-2016 PMA3_RS08830 2da4e8b0c814ba7a4267addb1033b594 583 Gene3D G3DSA:2.40.440.10 331 377 4.2E-13 T 13-09-2016 PMA3_RS08830 2da4e8b0c814ba7a4267addb1033b594 583 Gene3D G3DSA:2.40.440.10 438 486 4.2E-13 T 13-09-2016 PMA3_RS08830 2da4e8b0c814ba7a4267addb1033b594 583 SUPERFAMILY SSF141523 331 386 6.15E-21 T 13-09-2016 PMA3_RS08830 2da4e8b0c814ba7a4267addb1033b594 583 SUPERFAMILY SSF141523 436 486 6.15E-21 T 13-09-2016 PMA3_RS00450 aa9926b7988ddb5fcd7a46bfdf0f43d6 482 PANTHER PTHR30203:SF5 15 470 8.7E-139 T 13-09-2016 PMA3_RS00450 aa9926b7988ddb5fcd7a46bfdf0f43d6 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 468 2.8E-80 T 13-09-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PMA3_RS00450 aa9926b7988ddb5fcd7a46bfdf0f43d6 482 PANTHER PTHR30203 15 470 8.7E-139 T 13-09-2016 PMA3_RS00450 aa9926b7988ddb5fcd7a46bfdf0f43d6 482 SUPERFAMILY SSF56954 7 30 1.96E-87 T 13-09-2016 PMA3_RS00450 aa9926b7988ddb5fcd7a46bfdf0f43d6 482 SUPERFAMILY SSF56954 59 470 1.96E-87 T 13-09-2016 PMA3_RS00450 aa9926b7988ddb5fcd7a46bfdf0f43d6 482 Pfam PF02321 Outer membrane efflux protein 68 257 5.2E-18 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS00450 aa9926b7988ddb5fcd7a46bfdf0f43d6 482 Pfam PF02321 Outer membrane efflux protein 288 466 1.3E-20 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS00450 aa9926b7988ddb5fcd7a46bfdf0f43d6 482 Gene3D G3DSA:1.20.1600.10 58 471 1.5E-86 T 13-09-2016 PMA3_RS14240 9581ba488cc624952e16285512ea2212 445 Gene3D G3DSA:1.20.1250.20 18 190 8.7E-36 T 13-09-2016 PMA3_RS14240 9581ba488cc624952e16285512ea2212 445 SUPERFAMILY SSF103473 12 429 2.09E-80 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS14240 9581ba488cc624952e16285512ea2212 445 Gene3D G3DSA:1.20.1250.20 252 431 1.3E-26 T 13-09-2016 PMA3_RS14240 9581ba488cc624952e16285512ea2212 445 PANTHER PTHR24064 4 435 1.8E-77 T 13-09-2016 PMA3_RS14240 9581ba488cc624952e16285512ea2212 445 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS14240 9581ba488cc624952e16285512ea2212 445 PANTHER PTHR24064:SF234 4 435 1.8E-77 T 13-09-2016 PMA3_RS14240 9581ba488cc624952e16285512ea2212 445 Pfam PF07690 Major Facilitator Superfamily 27 335 5.0E-39 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS16005 acb8ed734d8dc768d637d5ad9f04af1b 226 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 218 3.9E-72 T 13-09-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 PMA3_RS16005 acb8ed734d8dc768d637d5ad9f04af1b 226 SUPERFAMILY SSF161098 8 216 4.58E-48 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS16005 acb8ed734d8dc768d637d5ad9f04af1b 226 PANTHER PTHR30183 1 216 9.4E-67 T 13-09-2016 PMA3_RS16005 acb8ed734d8dc768d637d5ad9f04af1b 226 Gene3D G3DSA:1.10.3720.10 8 217 3.1E-43 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS16005 acb8ed734d8dc768d637d5ad9f04af1b 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 215 1.5E-18 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS10330 eb6250ab30bbb6b6d4f67a26777ae5c7 484 PANTHER PTHR11632 2 465 3.8E-260 T 13-09-2016 PMA3_RS10330 eb6250ab30bbb6b6d4f67a26777ae5c7 484 PANTHER PTHR11632:SF47 2 465 3.8E-260 T 13-09-2016 PMA3_RS10330 eb6250ab30bbb6b6d4f67a26777ae5c7 484 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 2 466 3.3E-202 T 13-09-2016 IPR012831 Precorrin 3B synthase CobZ PMA3_RS10330 eb6250ab30bbb6b6d4f67a26777ae5c7 484 Pfam PF00890 FAD binding domain 3 441 6.1E-37 T 13-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PMA3_RS10330 eb6250ab30bbb6b6d4f67a26777ae5c7 484 SUPERFAMILY SSF56425 259 405 3.03E-24 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS10330 eb6250ab30bbb6b6d4f67a26777ae5c7 484 Gene3D G3DSA:3.90.700.10 263 402 1.7E-20 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS10330 eb6250ab30bbb6b6d4f67a26777ae5c7 484 Gene3D G3DSA:3.50.50.60 406 466 1.7E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10330 eb6250ab30bbb6b6d4f67a26777ae5c7 484 Gene3D G3DSA:3.50.50.60 2 243 1.7E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10330 eb6250ab30bbb6b6d4f67a26777ae5c7 484 SUPERFAMILY SSF51905 404 468 1.53E-38 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10330 eb6250ab30bbb6b6d4f67a26777ae5c7 484 SUPERFAMILY SSF51905 3 240 1.53E-38 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11445 632059044cf03a2d5f08febfb20bd4a1 65 PANTHER PTHR38453 1 65 2.4E-37 T 13-09-2016 PMA3_RS11445 632059044cf03a2d5f08febfb20bd4a1 65 Pfam PF04328 Protein of unknown function (DUF466) 5 65 2.5E-28 T 13-09-2016 IPR007423 Protein of unknown function DUF466 PMA3_RS11445 632059044cf03a2d5f08febfb20bd4a1 65 PANTHER PTHR38453:SF1 1 65 2.4E-37 T 13-09-2016 PMA3_RS07970 d87239de08c888f1cdbf044ca767dd59 455 Gene3D G3DSA:3.40.1140.10 283 418 1.8E-33 T 13-09-2016 PMA3_RS07970 d87239de08c888f1cdbf044ca767dd59 455 Gene3D G3DSA:3.40.1140.10 1 108 1.8E-33 T 13-09-2016 PMA3_RS07970 d87239de08c888f1cdbf044ca767dd59 455 Pfam PF00005 ABC transporter 28 107 3.7E-6 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS07970 d87239de08c888f1cdbf044ca767dd59 455 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 188 360 2.2E-19 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS07970 d87239de08c888f1cdbf044ca767dd59 455 SMART SM00382 28 373 2.3E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS07970 d87239de08c888f1cdbf044ca767dd59 455 SUPERFAMILY SSF52540 234 377 6.84E-27 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07970 d87239de08c888f1cdbf044ca767dd59 455 SUPERFAMILY SSF52540 125 199 6.84E-27 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07970 d87239de08c888f1cdbf044ca767dd59 455 SUPERFAMILY SSF52540 1 92 6.84E-27 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 Gene3D G3DSA:3.50.50.60 308 346 1.7E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 Gene3D G3DSA:3.50.50.60 33 193 1.7E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 Gene3D G3DSA:3.30.9.10 358 404 2.2E-14 T 13-09-2016 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 Gene3D G3DSA:3.30.9.10 194 303 2.2E-14 T 13-09-2016 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 PANTHER PTHR13789 6 453 2.2E-104 T 13-09-2016 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 325 5.2E-32 T 13-09-2016 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 361 377 5.2E-32 T 13-09-2016 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 5.2E-32 T 13-09-2016 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 33 55 5.2E-32 T 13-09-2016 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 5.2E-32 T 13-09-2016 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 343 361 5.2E-32 T 13-09-2016 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 Pfam PF01494 FAD binding domain 32 375 1.5E-60 T 13-09-2016 IPR002938 FAD-binding domain GO:0071949 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 SUPERFAMILY SSF51905 33 202 2.29E-56 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 SUPERFAMILY SSF51905 297 408 2.29E-56 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18005 0ad644b21b34cf00f384d0d325aea029 570 PANTHER PTHR13789:SF219 6 453 2.2E-104 T 13-09-2016 PMA3_RS00715 8ea0145fed2fa0a1e9e994c9cc918f47 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 215 2.3E-24 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00715 8ea0145fed2fa0a1e9e994c9cc918f47 221 PANTHER PTHR30614:SF18 5 220 1.1E-118 T 13-09-2016 PMA3_RS00715 8ea0145fed2fa0a1e9e994c9cc918f47 221 Gene3D G3DSA:1.10.3720.10 10 216 2.8E-54 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00715 8ea0145fed2fa0a1e9e994c9cc918f47 221 SUPERFAMILY SSF161098 13 200 2.75E-49 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00715 8ea0145fed2fa0a1e9e994c9cc918f47 221 PANTHER PTHR30614 5 220 1.1E-118 T 13-09-2016 PMA3_RS00715 8ea0145fed2fa0a1e9e994c9cc918f47 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 3.7E-34 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS20255 cbcafc2ee05c50f5f192f97cc605d525 476 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 108 119 - T 13-09-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS20255 cbcafc2ee05c50f5f192f97cc605d525 476 PANTHER PTHR11228 101 451 5.4E-36 T 13-09-2016 PMA3_RS20255 cbcafc2ee05c50f5f192f97cc605d525 476 TIGRFAM TIGR03906 quino_hemo_SAM: quinohemoprotein amine dehydrogenase maturation protein 10 475 3.6E-239 T 13-09-2016 IPR023886 Quinohemoprotein amine dehydrogenase, gamma subunit maturation protein PMA3_RS20255 cbcafc2ee05c50f5f192f97cc605d525 476 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 353 441 5.8E-15 T 13-09-2016 IPR023885 4Fe4S-binding SPASM domain PMA3_RS20255 cbcafc2ee05c50f5f192f97cc605d525 476 Pfam PF04055 Radical SAM superfamily 108 274 1.4E-12 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS20255 cbcafc2ee05c50f5f192f97cc605d525 476 Pfam PF13353 4Fe-4S single cluster domain 109 224 1.8E-14 T 13-09-2016 PMA3_RS20255 cbcafc2ee05c50f5f192f97cc605d525 476 SUPERFAMILY SSF102114 101 422 2.65E-46 T 13-09-2016 PMA3_RS20255 cbcafc2ee05c50f5f192f97cc605d525 476 PANTHER PTHR11228:SF21 101 451 5.4E-36 T 13-09-2016 PMA3_RS20255 cbcafc2ee05c50f5f192f97cc605d525 476 Gene3D G3DSA:3.20.20.70 92 431 1.1E-43 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS02430 6788ba0eb23315ee8d19142e81f41f43 500 Gene3D G3DSA:1.25.10.10 94 196 3.0E-6 T 13-09-2016 IPR011989 Armadillo-like helical PMA3_RS02430 6788ba0eb23315ee8d19142e81f41f43 500 PANTHER PTHR11795 178 500 3.6E-178 T 13-09-2016 PMA3_RS02430 6788ba0eb23315ee8d19142e81f41f43 500 SUPERFAMILY SSF48371 95 196 6.33E-8 T 13-09-2016 IPR016024 Armadillo-type fold GO:0005488 PMA3_RS02430 6788ba0eb23315ee8d19142e81f41f43 500 Pfam PF02653 Branched-chain amino acid transport system / permease component 208 483 2.2E-53 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS02430 6788ba0eb23315ee8d19142e81f41f43 500 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 206 497 9.7E-133 T 13-09-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type PMA3_RS02430 6788ba0eb23315ee8d19142e81f41f43 500 PANTHER PTHR11795:SF349 178 500 3.6E-178 T 13-09-2016 PMA3_RS05345 5ca2cf4d9aeca2b1a2ec133f7956aeef 449 PANTHER PTHR23505 10 431 9.0E-77 T 13-09-2016 PMA3_RS05345 5ca2cf4d9aeca2b1a2ec133f7956aeef 449 Pfam PF07690 Major Facilitator Superfamily 17 368 7.4E-45 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS05345 5ca2cf4d9aeca2b1a2ec133f7956aeef 449 SUPERFAMILY SSF103473 8 423 1.57E-69 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS05345 5ca2cf4d9aeca2b1a2ec133f7956aeef 449 Gene3D G3DSA:1.20.1250.20 206 421 1.5E-17 T 13-09-2016 PMA3_RS05345 5ca2cf4d9aeca2b1a2ec133f7956aeef 449 Gene3D G3DSA:1.20.1250.20 11 193 3.7E-40 T 13-09-2016 PMA3_RS28115 8bfc13a4b130209e011ed5f2f071f020 668 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 58 512 8.0E-153 T 13-09-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PMA3_RS28115 8bfc13a4b130209e011ed5f2f071f020 668 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 20 512 1.2E-171 T 13-09-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PMA3_RS28115 8bfc13a4b130209e011ed5f2f071f020 668 PANTHER PTHR30047:SF6 1 663 0.0 T 13-09-2016 PMA3_RS28115 8bfc13a4b130209e011ed5f2f071f020 668 PANTHER PTHR30047 1 663 0.0 T 13-09-2016 PMA3_RS15855 934e9fd932e07bce8b8f08acdd83579a 325 SUPERFAMILY SSF51735 100 288 2.23E-57 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15855 934e9fd932e07bce8b8f08acdd83579a 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.7E-60 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS15855 934e9fd932e07bce8b8f08acdd83579a 325 PANTHER PTHR10996 1 324 3.4E-138 T 13-09-2016 PMA3_RS15855 934e9fd932e07bce8b8f08acdd83579a 325 Gene3D G3DSA:3.40.50.720 114 287 2.3E-65 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15855 934e9fd932e07bce8b8f08acdd83579a 325 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 13-09-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PMA3_RS15855 934e9fd932e07bce8b8f08acdd83579a 325 Gene3D G3DSA:3.40.50.720 3 113 2.0E-27 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15855 934e9fd932e07bce8b8f08acdd83579a 325 PANTHER PTHR10996:SF118 1 324 3.4E-138 T 13-09-2016 PMA3_RS15855 934e9fd932e07bce8b8f08acdd83579a 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 8.2E-29 T 13-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PMA3_RS15855 934e9fd932e07bce8b8f08acdd83579a 325 SUPERFAMILY SSF52283 1 133 3.61E-28 T 13-09-2016 PMA3_RS28295 3469ece9cc983246181b3dfeb8c212c4 197 SUPERFAMILY SSF101874 21 196 1.57E-48 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS28295 3469ece9cc983246181b3dfeb8c212c4 197 Gene3D G3DSA:2.40.128.110 22 195 9.0E-53 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS28295 3469ece9cc983246181b3dfeb8c212c4 197 PANTHER PTHR34406:SF1 1 196 7.4E-48 T 13-09-2016 PMA3_RS28295 3469ece9cc983246181b3dfeb8c212c4 197 Pfam PF04264 YceI-like domain 25 191 1.6E-36 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS28295 3469ece9cc983246181b3dfeb8c212c4 197 PANTHER PTHR34406 1 196 7.4E-48 T 13-09-2016 PMA3_RS28295 3469ece9cc983246181b3dfeb8c212c4 197 SMART SM00867 24 194 1.2E-61 T 13-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PMA3_RS16525 2b78bd35238415c105b8c2328592bf8c 380 Gene3D G3DSA:3.40.50.300 16 257 4.4E-81 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16525 2b78bd35238415c105b8c2328592bf8c 380 PANTHER PTHR24220 24 319 9.6E-187 T 13-09-2016 PMA3_RS16525 2b78bd35238415c105b8c2328592bf8c 380 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 53 378 4.2E-129 T 13-09-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PMA3_RS16525 2b78bd35238415c105b8c2328592bf8c 380 Pfam PF08402 TOBE domain 300 378 7.8E-17 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS16525 2b78bd35238415c105b8c2328592bf8c 380 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS16525 2b78bd35238415c105b8c2328592bf8c 380 SUPERFAMILY SSF52540 22 262 1.77E-86 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16525 2b78bd35238415c105b8c2328592bf8c 380 Pfam PF00005 ABC transporter 39 180 6.7E-38 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS16525 2b78bd35238415c105b8c2328592bf8c 380 SMART SM00382 47 235 5.6E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS16525 2b78bd35238415c105b8c2328592bf8c 380 PANTHER PTHR24220:SF481 24 319 9.6E-187 T 13-09-2016 PMA3_RS16525 2b78bd35238415c105b8c2328592bf8c 380 SUPERFAMILY SSF50331 255 378 3.51E-16 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS01355 02be601c747ea30160e3f1cac929f436 264 Pfam PF00902 Sec-independent protein translocase protein (TatC) 16 225 3.6E-65 T 13-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PMA3_RS01355 02be601c747ea30160e3f1cac929f436 264 PANTHER PTHR30371:SF0 2 263 3.8E-112 T 13-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PMA3_RS01355 02be601c747ea30160e3f1cac929f436 264 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 245 18.374 T 13-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PMA3_RS01355 02be601c747ea30160e3f1cac929f436 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 1.1E-49 T 13-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PMA3_RS01355 02be601c747ea30160e3f1cac929f436 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 1.1E-49 T 13-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PMA3_RS01355 02be601c747ea30160e3f1cac929f436 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 1.1E-49 T 13-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PMA3_RS01355 02be601c747ea30160e3f1cac929f436 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 1.1E-49 T 13-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PMA3_RS01355 02be601c747ea30160e3f1cac929f436 264 ProSitePatterns PS01218 TatC family signature. 158 177 - T 13-09-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site PMA3_RS01355 02be601c747ea30160e3f1cac929f436 264 PANTHER PTHR30371 2 263 3.8E-112 T 13-09-2016 PMA3_RS01355 02be601c747ea30160e3f1cac929f436 264 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 3.7E-75 T 13-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 PRINTS PR01576 Peptide deformylase signature 130 159 1.8E-30 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 PRINTS PR01576 Peptide deformylase signature 35 64 1.8E-30 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 PRINTS PR01576 Peptide deformylase signature 111 129 1.8E-30 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 PRINTS PR01576 Peptide deformylase signature 99 110 1.8E-30 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 PANTHER PTHR10458 1 167 5.0E-80 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 Pfam PF01327 Polypeptide deformylase 3 159 3.1E-44 T 13-09-2016 IPR023635 Peptide deformylase PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 PANTHER PTHR10458:SF4 1 167 5.0E-80 T 13-09-2016 PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 162 4.0E-33 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 Gene3D G3DSA:3.90.45.10 1 165 1.8E-49 T 13-09-2016 IPR023635 Peptide deformylase PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 SUPERFAMILY SSF56420 1 167 1.96E-54 T 13-09-2016 IPR023635 Peptide deformylase PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 Hamap MF_00163 Peptide deformylase [def]. 1 172 26.436 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS22975 3954ead1e1d097665270b34cb8ed4c4e 179 PIRSF PIRSF004749 1 177 6.0E-45 T 13-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PMA3_RS12025 c1da555a92383040201934f92923125a 81 Gene3D G3DSA:3.30.70.20 16 75 7.3E-16 T 13-09-2016 PMA3_RS12025 c1da555a92383040201934f92923125a 81 SUPERFAMILY SSF54862 8 74 3.84E-14 T 13-09-2016 PMA3_RS12025 c1da555a92383040201934f92923125a 81 Pfam PF12838 4Fe-4S dicluster domain 28 71 2.1E-8 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS12025 c1da555a92383040201934f92923125a 81 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS07495 2e35ad856e00ecdc043d005caa4bff1c 460 PANTHER PTHR13932:SF6 1 455 1.3E-231 T 13-09-2016 PMA3_RS07495 2e35ad856e00ecdc043d005caa4bff1c 460 PANTHER PTHR13932 1 455 1.3E-231 T 13-09-2016 PMA3_RS07495 2e35ad856e00ecdc043d005caa4bff1c 460 Pfam PF06969 HemN C-terminal domain 369 435 7.1E-12 T 13-09-2016 IPR010723 HemN, C-terminal PMA3_RS07495 2e35ad856e00ecdc043d005caa4bff1c 460 SUPERFAMILY SSF102114 6 448 4.84E-133 T 13-09-2016 PMA3_RS07495 2e35ad856e00ecdc043d005caa4bff1c 460 PIRSF PIRSF000167 4 459 1.9E-165 T 13-09-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 PMA3_RS07495 2e35ad856e00ecdc043d005caa4bff1c 460 Pfam PF04055 Radical SAM superfamily 58 232 3.8E-18 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS07495 2e35ad856e00ecdc043d005caa4bff1c 460 Gene3D G3DSA:3.80.30.20 54 278 4.4E-28 T 13-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe PMA3_RS07495 2e35ad856e00ecdc043d005caa4bff1c 460 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 460 7.6E-174 T 13-09-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 PMA3_RS07495 2e35ad856e00ecdc043d005caa4bff1c 460 SMART SM00729 53 276 3.0E-46 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS16895 4f7ea012aeb21157eac49cfb95ddb980 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 352 8.7E-129 T 13-09-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 PMA3_RS16895 4f7ea012aeb21157eac49cfb95ddb980 376 SUPERFAMILY SSF53756 1 355 1.79E-114 T 13-09-2016 PMA3_RS16895 4f7ea012aeb21157eac49cfb95ddb980 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 6 352 2.7E-111 T 13-09-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain PMA3_RS16895 4f7ea012aeb21157eac49cfb95ddb980 376 Gene3D G3DSA:3.40.50.2000 1 194 2.7E-65 T 13-09-2016 PMA3_RS16895 4f7ea012aeb21157eac49cfb95ddb980 376 PANTHER PTHR18964 1 374 5.4E-146 T 13-09-2016 PMA3_RS16895 4f7ea012aeb21157eac49cfb95ddb980 376 Gene3D G3DSA:3.40.50.2000 195 353 4.4E-63 T 13-09-2016 PMA3_RS16895 4f7ea012aeb21157eac49cfb95ddb980 376 PANTHER PTHR18964:SF2 1 374 5.4E-146 T 13-09-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 PMA3_RS12500 3288338777fe5e89078a3e492e0bc5b1 84 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 5 84 7.4E-9 T 13-09-2016 IPR021793 Major outer membrane lipoprotein Oprl PMA3_RS14915 2b142402f0b6d4d9c6f70dfff48f4022 117 Pfam PF11154 Protein of unknown function (DUF2934) 5 38 6.6E-14 T 13-09-2016 IPR021327 Protein of unknown function DUF2934 PMA3_RS05320 210fbb530878a48bbaf36f525dfdf531 418 Pfam PF02653 Branched-chain amino acid transport system / permease component 114 399 2.6E-52 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS05320 210fbb530878a48bbaf36f525dfdf531 418 Pfam PF11862 Domain of unknown function (DUF3382) 3 105 1.2E-20 T 13-09-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal PMA3_RS05320 210fbb530878a48bbaf36f525dfdf531 418 PANTHER PTHR30482:SF9 62 418 2.4E-188 T 13-09-2016 PMA3_RS05320 210fbb530878a48bbaf36f525dfdf531 418 PANTHER PTHR30482 62 418 2.4E-188 T 13-09-2016 PMA3_RS08190 ff906c3c936d13a32e8f750ff8e02912 309 Gene3D G3DSA:3.40.50.1100 99 306 3.4E-40 T 13-09-2016 PMA3_RS08190 ff906c3c936d13a32e8f750ff8e02912 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 296 2.0E-9 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS08190 ff906c3c936d13a32e8f750ff8e02912 309 PIRSF PIRSF006278 1 309 1.6E-77 T 13-09-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase PMA3_RS08190 ff906c3c936d13a32e8f750ff8e02912 309 SUPERFAMILY SSF53686 12 304 1.1E-55 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS19030 347dbd1b0d2d14260395dec2a07019b8 389 Gene3D G3DSA:3.30.390.10 1 127 8.4E-45 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS19030 347dbd1b0d2d14260395dec2a07019b8 389 SUPERFAMILY SSF51604 123 380 1.84E-54 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS19030 347dbd1b0d2d14260395dec2a07019b8 389 PANTHER PTHR13794 1 381 4.0E-104 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS19030 347dbd1b0d2d14260395dec2a07019b8 389 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 6 134 2.5E-4 T 13-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PMA3_RS19030 347dbd1b0d2d14260395dec2a07019b8 389 Gene3D G3DSA:3.20.20.120 128 370 3.4E-63 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS19030 347dbd1b0d2d14260395dec2a07019b8 389 SMART SM00922 162 259 6.6E-18 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS19030 347dbd1b0d2d14260395dec2a07019b8 389 SUPERFAMILY SSF54826 1 140 6.34E-30 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS19030 347dbd1b0d2d14260395dec2a07019b8 389 Pfam PF13378 Enolase C-terminal domain-like 165 376 4.3E-41 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS19030 347dbd1b0d2d14260395dec2a07019b8 389 PANTHER PTHR13794:SF58 1 381 4.0E-104 T 13-09-2016 PMA3_RS28260 fd1a9e91123eeb937f7fa715147aab58 389 Gene3D G3DSA:1.20.1250.20 5 181 3.0E-24 T 13-09-2016 PMA3_RS28260 fd1a9e91123eeb937f7fa715147aab58 389 PANTHER PTHR23501 1 387 2.8E-153 T 13-09-2016 PMA3_RS28260 fd1a9e91123eeb937f7fa715147aab58 389 Gene3D G3DSA:1.20.1250.20 200 379 1.7E-10 T 13-09-2016 PMA3_RS28260 fd1a9e91123eeb937f7fa715147aab58 389 PANTHER PTHR23501:SF4 1 387 2.8E-153 T 13-09-2016 PMA3_RS28260 fd1a9e91123eeb937f7fa715147aab58 389 SUPERFAMILY SSF103473 3 380 4.58E-55 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS28260 fd1a9e91123eeb937f7fa715147aab58 389 Pfam PF07690 Major Facilitator Superfamily 8 221 4.0E-27 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 13-09-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 Pfam PF01479 S4 domain 97 143 3.1E-18 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 9.0E-77 T 13-09-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 Gene3D G3DSA:3.10.290.10 99 198 2.0E-33 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 PANTHER PTHR11831:SF4 1 206 2.0E-87 T 13-09-2016 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 SUPERFAMILY SSF55174 3 206 3.53E-68 T 13-09-2016 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 SMART SM00363 96 160 7.5E-16 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 PANTHER PTHR11831 1 206 2.0E-87 T 13-09-2016 IPR022801 Ribosomal protein S4/S9 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 34.284 T 13-09-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 3.4E-28 T 13-09-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 Gene3D G3DSA:1.10.1050.10 1 98 3.9E-40 T 13-09-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PMA3_RS27150 5827818eb3b8419e4d8e40ac18e89989 206 SMART SM01390 3 95 3.1E-46 T 13-09-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 15 143 3.1E-34 T 13-09-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 103 117 3.3E-25 T 13-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 3.3E-25 T 13-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 3.3E-25 T 13-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 208 221 3.3E-25 T 13-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 Gene3D G3DSA:3.40.120.10 176 253 2.8E-36 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 257 2.5E-28 T 13-09-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 Gene3D G3DSA:3.40.120.10 12 146 2.1E-33 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 104 113 - T 13-09-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 PANTHER PTHR22573:SF28 13 464 1.6E-204 T 13-09-2016 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 SUPERFAMILY SSF55957 371 465 1.55E-25 T 13-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 SUPERFAMILY SSF53738 11 143 1.81E-37 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 PANTHER PTHR22573 13 464 1.6E-204 T 13-09-2016 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 Gene3D G3DSA:3.40.120.10 255 370 1.1E-45 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 Gene3D G3DSA:3.30.310.50 374 464 3.9E-30 T 13-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 449 5.8E-14 T 13-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 369 9.5E-23 T 13-09-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 SUPERFAMILY SSF53738 158 259 3.1E-32 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS29515 9d3549e15994ba25455998331d1ec72d 465 SUPERFAMILY SSF53738 262 368 2.63E-34 T 13-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PMA3_RS22460 aecb7afdb68ec874c74121e94c70f354 167 Pfam PF16036 Chalcone isomerase-like 54 161 1.6E-12 T 13-09-2016 IPR016087 Chalcone isomerase GO:0016872 PMA3_RS05275 7857806c28f045bc92c6b732d0f68a26 395 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 10 381 2.1E-155 T 13-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PMA3_RS05275 7857806c28f045bc92c6b732d0f68a26 395 Gene3D G3DSA:1.20.1530.10 6 389 5.7E-153 T 13-09-2016 IPR023171 Na/H antiporter domain PMA3_RS05275 7857806c28f045bc92c6b732d0f68a26 395 PANTHER PTHR30341:SF0 1 395 1.9E-173 T 13-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PMA3_RS05275 7857806c28f045bc92c6b732d0f68a26 395 Pfam PF06965 Na+/H+ antiporter 1 9 382 1.4E-147 T 13-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PMA3_RS05275 7857806c28f045bc92c6b732d0f68a26 395 PANTHER PTHR30341 1 395 1.9E-173 T 13-09-2016 PMA3_RS05275 7857806c28f045bc92c6b732d0f68a26 395 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 7 389 23.477 T 13-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PMA3_RS29375 c44d24c5806fe45931cbf4fcbdeb2a4c 464 PANTHER PTHR11206:SF95 6 452 1.2E-91 T 13-09-2016 PMA3_RS29375 c44d24c5806fe45931cbf4fcbdeb2a4c 464 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 423 1.7E-69 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS29375 c44d24c5806fe45931cbf4fcbdeb2a4c 464 PIRSF PIRSF006603 9 456 1.0E-59 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS29375 c44d24c5806fe45931cbf4fcbdeb2a4c 464 Pfam PF01554 MatE 18 176 1.0E-24 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS29375 c44d24c5806fe45931cbf4fcbdeb2a4c 464 Pfam PF01554 MatE 244 410 9.5E-28 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS29375 c44d24c5806fe45931cbf4fcbdeb2a4c 464 PANTHER PTHR11206 6 452 1.2E-91 T 13-09-2016 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 55 70 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 Gene3D G3DSA:1.10.3860.10 25 426 1.8E-110 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 PANTHER PTHR11958 21 433 1.2E-212 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 314 337 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 PANTHER PTHR11958:SF49 21 433 1.2E-212 T 13-09-2016 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 Pfam PF00375 Sodium:dicarboxylate symporter family 28 420 9.0E-105 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 SUPERFAMILY SSF118215 29 421 1.57E-112 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 PRINTS PR00173 Glutamate-aspartate symporter signature 346 365 7.2E-31 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 PRINTS PR00173 Glutamate-aspartate symporter signature 236 255 7.2E-31 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 PRINTS PR00173 Glutamate-aspartate symporter signature 311 337 7.2E-31 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 PRINTS PR00173 Glutamate-aspartate symporter signature 63 83 7.2E-31 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 PRINTS PR00173 Glutamate-aspartate symporter signature 22 42 7.2E-31 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 PRINTS PR00173 Glutamate-aspartate symporter signature 93 118 7.2E-31 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS19015 8156865a61dfcb5934515ea6d1260627 437 PRINTS PR00173 Glutamate-aspartate symporter signature 164 186 7.2E-31 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 596 1.7E-32 T 13-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 286 452 1.4E-15 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 Gene3D G3DSA:1.20.140.10 269 460 1.3E-43 T 13-09-2016 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 8 34 5.9E-7 T 13-09-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 SUPERFAMILY SSF47203 289 472 1.77E-38 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 PANTHER PTHR10909:SF269 1 374 1.4E-269 T 13-09-2016 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 PANTHER PTHR10909:SF269 391 477 1.4E-269 T 13-09-2016 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 44 156 1.8E-10 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 Gene3D G3DSA:2.40.110.10 160 268 3.0E-24 T 13-09-2016 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 2.0E-13 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 SUPERFAMILY SSF56645 36 271 1.14E-49 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 PANTHER PTHR10909 1 374 1.4E-269 T 13-09-2016 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 PANTHER PTHR10909 391 477 1.4E-269 T 13-09-2016 PMA3_RS01725 27a2fcb1b2535c3075b75ee04cdb0efe 600 Gene3D G3DSA:1.10.540.10 36 157 2.7E-16 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PIRSF PIRSF019574 1 369 5.2E-123 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PANTHER PTHR30222:SF11 10 368 4.5E-172 T 13-09-2016 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 Pfam PF13416 Bacterial extracellular solute-binding protein 46 334 2.6E-31 T 13-09-2016 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 Gene3D G3DSA:3.40.190.10 32 150 1.8E-21 T 13-09-2016 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PANTHER PTHR30222 10 368 4.5E-172 T 13-09-2016 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 SUPERFAMILY SSF53850 31 368 1.6E-92 T 13-09-2016 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 Gene3D G3DSA:3.40.190.10 151 318 1.1E-62 T 13-09-2016 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 5.5E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 5.5E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 5.5E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 5.5E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 5.5E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 5.5E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 5.5E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 5.5E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 5.5E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS19060 07599b710530d0c3d161df9c588158cd 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 5.5E-59 T 13-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PMA3_RS07615 27a8d8d33dad5a389f67cab773ef6e94 227 SUPERFAMILY SSF52540 5 223 2.78E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07615 27a8d8d33dad5a389f67cab773ef6e94 227 SMART SM00382 34 220 2.9E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS07615 27a8d8d33dad5a389f67cab773ef6e94 227 Gene3D G3DSA:3.40.50.300 5 223 2.6E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07615 27a8d8d33dad5a389f67cab773ef6e94 227 PANTHER PTHR24220 7 227 3.8E-107 T 13-09-2016 PMA3_RS07615 27a8d8d33dad5a389f67cab773ef6e94 227 Pfam PF00005 ABC transporter 25 171 4.7E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS07615 27a8d8d33dad5a389f67cab773ef6e94 227 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS07615 27a8d8d33dad5a389f67cab773ef6e94 227 PANTHER PTHR24220:SF509 7 227 3.8E-107 T 13-09-2016 PMA3_RS09970 9546da7937e115bdb9f06449b45fce8e 128 SUPERFAMILY SSF81296 25 128 6.16E-30 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS09970 9546da7937e115bdb9f06449b45fce8e 128 Pfam PF04234 CopC domain 26 127 7.6E-24 T 13-09-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 PMA3_RS09970 9546da7937e115bdb9f06449b45fce8e 128 Gene3D G3DSA:2.60.40.1220 25 128 5.0E-30 T 13-09-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like PMA3_RS18640 5d97e2053ccfc5a4bbfd83ca70eed3d7 290 Gene3D G3DSA:3.40.630.30 3 131 2.5E-16 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS18640 5d97e2053ccfc5a4bbfd83ca70eed3d7 290 PANTHER PTHR21471 1 290 2.9E-51 T 13-09-2016 PMA3_RS18640 5d97e2053ccfc5a4bbfd83ca70eed3d7 290 PANTHER PTHR21471:SF52 1 290 2.9E-51 T 13-09-2016 PMA3_RS18640 5d97e2053ccfc5a4bbfd83ca70eed3d7 290 SUPERFAMILY SSF55729 6 269 4.85E-35 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS18640 5d97e2053ccfc5a4bbfd83ca70eed3d7 290 Pfam PF13673 Acetyltransferase (GNAT) domain 42 128 5.4E-8 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS02030 8b72654f67545a797bcce34c291baaae 354 Pfam PF13484 4Fe-4S double cluster binding domain 194 258 4.1E-20 T 13-09-2016 PMA3_RS02030 8b72654f67545a797bcce34c291baaae 354 PANTHER PTHR30002 3 352 1.4E-183 T 13-09-2016 PMA3_RS02030 8b72654f67545a797bcce34c291baaae 354 PANTHER PTHR30002:SF4 3 352 1.4E-183 T 13-09-2016 PMA3_RS02030 8b72654f67545a797bcce34c291baaae 354 Pfam PF08331 Domain of unknown function (DUF1730) 63 141 2.8E-23 T 13-09-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS02030 8b72654f67545a797bcce34c291baaae 354 Gene3D G3DSA:3.30.70.20 192 259 7.5E-7 T 13-09-2016 PMA3_RS02030 8b72654f67545a797bcce34c291baaae 354 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS02030 8b72654f67545a797bcce34c291baaae 354 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 15 351 3.0E-153 T 13-09-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS02030 8b72654f67545a797bcce34c291baaae 354 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 8 317 50.069 T 13-09-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS02030 8b72654f67545a797bcce34c291baaae 354 SUPERFAMILY SSF46548 140 258 1.36E-17 T 13-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PMA3_RS21990 b435c69129749a960fcc130a4113075d 195 Pfam PF03695 Uncharacterised protein family (UPF0149) 9 181 1.3E-33 T 13-09-2016 IPR011978 Uncharacterised protein family UPF0149 PMA3_RS21990 b435c69129749a960fcc130a4113075d 195 SUPERFAMILY SSF101327 9 182 2.62E-20 T 13-09-2016 IPR011978 Uncharacterised protein family UPF0149 PMA3_RS21990 b435c69129749a960fcc130a4113075d 195 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 180 9.8E-47 T 13-09-2016 IPR011978 Uncharacterised protein family UPF0149 PMA3_RS20040 11d37986319357043fc9984baa00bfe9 373 PANTHER PTHR30386:SF7 23 362 4.1E-99 T 13-09-2016 PMA3_RS20040 11d37986319357043fc9984baa00bfe9 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 308 7.3E-18 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS20040 11d37986319357043fc9984baa00bfe9 373 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 1.1E-6 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS20040 11d37986319357043fc9984baa00bfe9 373 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 348 363 1.1E-6 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS20040 11d37986319357043fc9984baa00bfe9 373 SUPERFAMILY SSF111369 67 143 6.54E-9 T 13-09-2016 PMA3_RS20040 11d37986319357043fc9984baa00bfe9 373 SUPERFAMILY SSF111369 181 290 1.44E-12 T 13-09-2016 PMA3_RS20040 11d37986319357043fc9984baa00bfe9 373 PANTHER PTHR30386 23 362 4.1E-99 T 13-09-2016 PMA3_RS20040 11d37986319357043fc9984baa00bfe9 373 Gene3D G3DSA:2.40.50.100 229 262 3.0E-21 T 13-09-2016 PMA3_RS20040 11d37986319357043fc9984baa00bfe9 373 Gene3D G3DSA:2.40.50.100 67 98 3.0E-21 T 13-09-2016 PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 SUPERFAMILY SSF51011 606 713 1.3E-28 T 13-09-2016 PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 Gene3D G3DSA:3.20.20.80 173 594 2.7E-124 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 PANTHER PTHR10357 14 596 0.0 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 PANTHER PTHR10357 625 714 0.0 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 Gene3D G3DSA:2.60.40.1180 606 713 3.0E-31 T 13-09-2016 IPR013780 Glycosyl hydrolase, all-beta PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 Pfam PF00128 Alpha amylase, catalytic domain 205 300 1.1E-9 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 SUPERFAMILY SSF81296 22 167 8.4E-46 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 SUPERFAMILY SSF51445 156 488 2.57E-132 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 SUPERFAMILY SSF51445 517 594 2.57E-132 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 Gene3D G3DSA:2.60.40.10 22 172 4.7E-53 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 PANTHER PTHR10357:SF74 14 596 0.0 T 13-09-2016 PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 PANTHER PTHR10357:SF74 625 714 0.0 T 13-09-2016 PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 26 114 7.2E-16 T 13-09-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 SMART SM00642 175 585 2.6E-8 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14920 efc2703a67941bc51d7660ad1a7722b1 720 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 22 713 0.0 T 13-09-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 PMA3_RS20275 5663c139776f81f38ae77e127d427e0a 496 SUPERFAMILY SSF53720 13 495 4.32E-173 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS20275 5663c139776f81f38ae77e127d427e0a 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 269 276 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS20275 5663c139776f81f38ae77e127d427e0a 496 Pfam PF00171 Aldehyde dehydrogenase family 26 492 2.0E-176 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS20275 5663c139776f81f38ae77e127d427e0a 496 PANTHER PTHR11699:SF46 1 496 8.7E-241 T 13-09-2016 PMA3_RS20275 5663c139776f81f38ae77e127d427e0a 496 PANTHER PTHR11699 1 496 8.7E-241 T 13-09-2016 PMA3_RS20275 5663c139776f81f38ae77e127d427e0a 496 Gene3D G3DSA:3.40.309.10 284 467 2.9E-72 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS20275 5663c139776f81f38ae77e127d427e0a 496 Gene3D G3DSA:3.40.605.10 19 283 9.0E-102 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS20275 5663c139776f81f38ae77e127d427e0a 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS04065 76149958c7d5dc92a525e68df8d6c346 137 SUPERFAMILY SSF101738 1 115 7.59E-48 T 13-09-2016 IPR007481 Stringent starvation protein B PMA3_RS04065 76149958c7d5dc92a525e68df8d6c346 137 PANTHER PTHR37486:SF1 1 137 2.2E-71 T 13-09-2016 PMA3_RS04065 76149958c7d5dc92a525e68df8d6c346 137 PIRSF PIRSF005276 1 137 2.9E-56 T 13-09-2016 IPR007481 Stringent starvation protein B PMA3_RS04065 76149958c7d5dc92a525e68df8d6c346 137 PANTHER PTHR37486 1 137 2.2E-71 T 13-09-2016 PMA3_RS04065 76149958c7d5dc92a525e68df8d6c346 137 Gene3D G3DSA:2.30.30.220 1 104 1.3E-47 T 13-09-2016 IPR007481 Stringent starvation protein B PMA3_RS04065 76149958c7d5dc92a525e68df8d6c346 137 Pfam PF04386 Stringent starvation protein B 4 137 3.6E-36 T 13-09-2016 IPR007481 Stringent starvation protein B PMA3_RS24055 192040df31f93e507f0a9480b4da6c7b 333 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 5 310 2.9E-66 T 13-09-2016 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 PMA3_RS24055 192040df31f93e507f0a9480b4da6c7b 333 SUPERFAMILY SSF55060 180 332 6.26E-36 T 13-09-2016 IPR013750 GHMP kinase, C-terminal domain PMA3_RS24055 192040df31f93e507f0a9480b4da6c7b 333 SUPERFAMILY SSF54211 1 169 4.78E-26 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS24055 192040df31f93e507f0a9480b4da6c7b 333 Gene3D G3DSA:3.30.70.890 178 324 1.6E-43 T 13-09-2016 IPR013750 GHMP kinase, C-terminal domain PMA3_RS24055 192040df31f93e507f0a9480b4da6c7b 333 PANTHER PTHR10977:SF3 1 308 5.3E-72 T 13-09-2016 PMA3_RS24055 192040df31f93e507f0a9480b4da6c7b 333 PIRSF PIRSF015950 1 332 1.5E-87 T 13-09-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 PMA3_RS24055 192040df31f93e507f0a9480b4da6c7b 333 PANTHER PTHR10977 1 308 5.3E-72 T 13-09-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 PMA3_RS24055 192040df31f93e507f0a9480b4da6c7b 333 Gene3D G3DSA:3.30.230.10 2 177 2.1E-43 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 Pfam PF00158 Sigma-54 interaction domain 246 410 3.2E-65 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 SUPERFAMILY SSF111126 104 186 4.18E-13 T 13-09-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 SUPERFAMILY SSF111126 25 75 4.18E-13 T 13-09-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 556 573 9.5E-7 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 573 593 9.5E-7 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 Pfam PF06505 Activator of aromatic catabolism 14 114 2.3E-31 T 13-09-2016 IPR010523 Activator of aromatic catabolism PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 330 345 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 268 281 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 Gene3D G3DSA:3.30.1380.20 20 192 3.9E-20 T 13-09-2016 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 Gene3D G3DSA:1.10.10.60 549 589 1.2E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 SUPERFAMILY SSF52540 245 483 5.45E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 PANTHER PTHR32071 245 589 2.3E-128 T 13-09-2016 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 Pfam PF02954 Bacterial regulatory protein, Fis family 550 589 2.1E-11 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 Gene3D G3DSA:1.10.8.60 417 486 3.4E-20 T 13-09-2016 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 SMART SM00989 125 187 2.2E-22 T 13-09-2016 IPR004096 4-vinyl reductase, 4VR PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 34 140 7.0E-25 T 13-09-2016 IPR010523 Activator of aromatic catabolism PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 Gene3D G3DSA:3.40.50.300 243 416 3.7E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 SMART SM00382 264 408 8.5E-13 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 SUPERFAMILY SSF46689 540 590 3.0E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 SUPERFAMILY SSF46689 457 501 3.0E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18125 33fb1e5c68575006aa81be44ef128482 598 Pfam PF02830 V4R domain 128 187 1.2E-16 T 13-09-2016 IPR004096 4-vinyl reductase, 4VR PMA3_RS25220 bb10dae99ded3e0bac1321ccf5b650d3 481 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 480 38.685 T 13-09-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PMA3_RS25220 bb10dae99ded3e0bac1321ccf5b650d3 481 Pfam PF02637 GatB domain 328 479 1.4E-50 T 13-09-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 PMA3_RS25220 bb10dae99ded3e0bac1321ccf5b650d3 481 PANTHER PTHR11659:SF0 2 480 1.8E-248 T 13-09-2016 PMA3_RS25220 bb10dae99ded3e0bac1321ccf5b650d3 481 PANTHER PTHR11659 2 480 1.8E-248 T 13-09-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 PMA3_RS25220 bb10dae99ded3e0bac1321ccf5b650d3 481 SMART SM00845 328 479 5.0E-77 T 13-09-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 PMA3_RS25220 bb10dae99ded3e0bac1321ccf5b650d3 481 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 479 8.1E-170 T 13-09-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PMA3_RS25220 bb10dae99ded3e0bac1321ccf5b650d3 481 SUPERFAMILY SSF89095 297 402 3.4E-34 T 13-09-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 PMA3_RS25220 bb10dae99ded3e0bac1321ccf5b650d3 481 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 13-09-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 PMA3_RS25220 bb10dae99ded3e0bac1321ccf5b650d3 481 SUPERFAMILY SSF55931 4 296 4.32E-121 T 13-09-2016 PMA3_RS25220 bb10dae99ded3e0bac1321ccf5b650d3 481 Pfam PF02934 GatB/GatE catalytic domain 5 288 1.6E-112 T 13-09-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 PMA3_RS04195 8ef54ad18d185152d110a18c52fa305c 225 Gene3D G3DSA:3.40.50.2300 1 119 5.3E-37 T 13-09-2016 PMA3_RS04195 8ef54ad18d185152d110a18c52fa305c 225 Gene3D G3DSA:1.10.10.10 125 220 1.5E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS04195 8ef54ad18d185152d110a18c52fa305c 225 SMART SM00862 144 219 6.3E-23 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS04195 8ef54ad18d185152d110a18c52fa305c 225 PANTHER PTHR26402:SF575 1 222 3.4E-143 T 13-09-2016 PMA3_RS04195 8ef54ad18d185152d110a18c52fa305c 225 SMART SM00448 1 111 1.7E-39 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04195 8ef54ad18d185152d110a18c52fa305c 225 SUPERFAMILY SSF52172 1 177 9.05E-39 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS04195 8ef54ad18d185152d110a18c52fa305c 225 PANTHER PTHR26402 1 222 3.4E-143 T 13-09-2016 PMA3_RS04195 8ef54ad18d185152d110a18c52fa305c 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 219 3.4E-23 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS04195 8ef54ad18d185152d110a18c52fa305c 225 Pfam PF00072 Response regulator receiver domain 3 111 1.9E-24 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS04195 8ef54ad18d185152d110a18c52fa305c 225 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 219 3.0E-93 T 13-09-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PMA3_RS21635 9898efe4f86b15368e262ca67a8d39f4 175 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 98 175 1.4E-19 T 13-09-2016 IPR022385 Rhs repeat-associated core GO:0097264 PMA3_RS21635 9898efe4f86b15368e262ca67a8d39f4 175 SUPERFAMILY SSF56399 139 172 7.77E-6 T 13-09-2016 PMA3_RS11630 5aaf183c27b99402778ddc1b9bdecb5e 377 PANTHER PTHR10909:SF302 1 377 2.3E-44 T 13-09-2016 PMA3_RS11630 5aaf183c27b99402778ddc1b9bdecb5e 377 SUPERFAMILY SSF47203 226 359 1.61E-27 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11630 5aaf183c27b99402778ddc1b9bdecb5e 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 1.5E-10 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11630 5aaf183c27b99402778ddc1b9bdecb5e 377 Gene3D G3DSA:1.10.540.10 1 100 3.0E-14 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11630 5aaf183c27b99402778ddc1b9bdecb5e 377 Gene3D G3DSA:2.40.110.10 125 214 2.1E-5 T 13-09-2016 PMA3_RS11630 5aaf183c27b99402778ddc1b9bdecb5e 377 SUPERFAMILY SSF56645 1 213 1.16E-26 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS11630 5aaf183c27b99402778ddc1b9bdecb5e 377 Gene3D G3DSA:1.20.140.10 227 356 2.1E-23 T 13-09-2016 PMA3_RS11630 5aaf183c27b99402778ddc1b9bdecb5e 377 PANTHER PTHR10909 1 377 2.3E-44 T 13-09-2016 PMA3_RS11630 5aaf183c27b99402778ddc1b9bdecb5e 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 353 3.3E-20 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS02910 1647d5efbcad7d2cebb605fa80015b16 289 Gene3D G3DSA:3.10.129.10 5 115 3.0E-49 T 13-09-2016 IPR029069 HotDog domain PMA3_RS02910 1647d5efbcad7d2cebb605fa80015b16 289 Pfam PF13622 Thioesterase-like superfamily 33 282 3.2E-61 T 13-09-2016 PMA3_RS02910 1647d5efbcad7d2cebb605fa80015b16 289 PANTHER PTHR11066 5 287 8.8E-121 T 13-09-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 PMA3_RS02910 1647d5efbcad7d2cebb605fa80015b16 289 SUPERFAMILY SSF54637 4 114 2.77E-41 T 13-09-2016 IPR029069 HotDog domain PMA3_RS02910 1647d5efbcad7d2cebb605fa80015b16 289 PANTHER PTHR11066:SF34 5 287 8.8E-121 T 13-09-2016 PMA3_RS02910 1647d5efbcad7d2cebb605fa80015b16 289 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 6.2E-94 T 13-09-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 PMA3_RS02910 1647d5efbcad7d2cebb605fa80015b16 289 Gene3D G3DSA:3.10.129.10 126 285 1.9E-58 T 13-09-2016 IPR029069 HotDog domain PMA3_RS02910 1647d5efbcad7d2cebb605fa80015b16 289 SUPERFAMILY SSF54637 117 283 9.43E-59 T 13-09-2016 IPR029069 HotDog domain PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 PIRSF PIRSF000171 1 532 4.4E-34 T 13-09-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 SUPERFAMILY SSF46977 425 526 2.35E-31 T 13-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 Gene3D G3DSA:1.20.58.100 418 521 1.7E-32 T 13-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 Pfam PF00890 FAD binding domain 8 392 1.4E-103 T 13-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 SUPERFAMILY SSF56425 238 353 1.05E-42 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 520 6.3E-201 T 13-09-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 8.1E-14 T 13-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 PANTHER PTHR11632 3 538 1.1E-261 T 13-09-2016 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 Gene3D G3DSA:3.90.700.10 244 348 1.5E-39 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 PANTHER PTHR11632:SF27 3 538 1.1E-261 T 13-09-2016 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 Gene3D G3DSA:3.50.50.60 4 243 2.2E-99 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 Gene3D G3DSA:3.50.50.60 349 410 2.2E-99 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 SUPERFAMILY SSF51905 356 448 4.12E-70 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 SUPERFAMILY SSF51905 5 255 4.12E-70 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 5.7E-9 T 13-09-2016 PMA3_RS22550 1534dd4c3755f0f9f769fe0bfbce67a3 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.7E-9 T 13-09-2016 PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 356 375 6.6E-7 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 283 294 6.6E-7 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 336 344 6.6E-7 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PANTHER PTHR24322:SF438 218 340 2.8E-65 T 13-09-2016 PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PANTHER PTHR24322 218 340 2.8E-65 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 SUPERFAMILY SSF51735 210 447 1.3E-61 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 Gene3D G3DSA:3.40.50.720 208 446 1.1E-65 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PANTHER PTHR24322 356 388 2.8E-65 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 330 346 6.9E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 283 294 6.9E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 356 375 6.9E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 410 430 6.9E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 377 394 6.9E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 6.9E-33 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 220 444 2.3E-49 T 13-09-2016 PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 PANTHER PTHR24322:SF438 356 388 2.8E-65 T 13-09-2016 PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 214 387 6.6E-8 T 13-09-2016 PMA3_RS02655 2b9e9c96af26fa9a7a1b824c345296da 450 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 343 371 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS01360 828756ab26ee54633f13c65262f2c4a6 151 PANTHER PTHR33162:SF4 1 137 3.6E-25 T 13-09-2016 PMA3_RS01360 828756ab26ee54633f13c65262f2c4a6 151 PANTHER PTHR33162 1 137 3.6E-25 T 13-09-2016 PMA3_RS01360 828756ab26ee54633f13c65262f2c4a6 151 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 148 16.383 T 13-09-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PMA3_RS01360 828756ab26ee54633f13c65262f2c4a6 151 Pfam PF02416 mttA/Hcf106 family 4 34 3.0E-7 T 13-09-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PMA3_RS01360 828756ab26ee54633f13c65262f2c4a6 151 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 75 5.3E-24 T 13-09-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PMA3_RS01360 828756ab26ee54633f13c65262f2c4a6 151 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.4E-18 T 13-09-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PMA3_RS01360 828756ab26ee54633f13c65262f2c4a6 151 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.4E-18 T 13-09-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PMA3_RS01360 828756ab26ee54633f13c65262f2c4a6 151 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.4E-18 T 13-09-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PMA3_RS25255 59622e7bb34575eb6581ec807b2743da 481 PANTHER PTHR11699 1 479 1.0E-236 T 13-09-2016 PMA3_RS25255 59622e7bb34575eb6581ec807b2743da 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS25255 59622e7bb34575eb6581ec807b2743da 481 Pfam PF00171 Aldehyde dehydrogenase family 15 476 3.7E-161 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS25255 59622e7bb34575eb6581ec807b2743da 481 Gene3D G3DSA:3.40.309.10 263 451 7.1E-65 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS25255 59622e7bb34575eb6581ec807b2743da 481 SUPERFAMILY SSF53720 5 480 3.14E-157 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS25255 59622e7bb34575eb6581ec807b2743da 481 PANTHER PTHR11699:SF200 1 479 1.0E-236 T 13-09-2016 PMA3_RS25255 59622e7bb34575eb6581ec807b2743da 481 Gene3D G3DSA:3.40.605.10 5 262 2.4E-90 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS25255 59622e7bb34575eb6581ec807b2743da 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 Pfam PF00679 Elongation factor G C-terminus 403 487 3.5E-19 T 13-09-2016 IPR000640 Translation elongation factor EFG, V domain PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 SUPERFAMILY SSF54980 295 373 1.94E-18 T 13-09-2016 IPR009022 Elongation factor G, III-V domain PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 Pfam PF03144 Elongation factor Tu domain 2 208 278 1.2E-7 T 13-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 8.4E-50 T 13-09-2016 IPR013842 GTP-binding protein LepA, C-terminal PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 SUPERFAMILY SSF54980 403 496 1.53E-24 T 13-09-2016 IPR009022 Elongation factor G, III-V domain PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 PANTHER PTHR23115:SF175 400 598 6.1E-274 T 13-09-2016 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 PANTHER PTHR23115:SF175 7 376 6.1E-274 T 13-09-2016 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.8E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.8E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.8E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 PRINTS PR00315 GTP-binding elongation factor signature 52 60 1.8E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.8E-13 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 Gene3D G3DSA:2.40.30.10 197 292 1.4E-19 T 13-09-2016 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 Gene3D G3DSA:3.30.70.870 295 372 4.2E-26 T 13-09-2016 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 2.3E-50 T 13-09-2016 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 PANTHER PTHR23115 7 376 6.1E-274 T 13-09-2016 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 PANTHER PTHR23115 400 598 6.1E-274 T 13-09-2016 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 597 1.0E-290 T 13-09-2016 IPR006297 Elongation factor 4 GO:0005525 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 176 4.6E-19 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 Gene3D G3DSA:3.30.70.240 404 492 2.2E-20 T 13-09-2016 IPR000640 Translation elongation factor EFG, V domain PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 299.091 T 13-09-2016 IPR006297 Elongation factor 4 GO:0005525 PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 SUPERFAMILY SSF52540 3 232 1.08E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS04365 cd389114bd380ba2053959b1d2a97bd3 599 Gene3D G3DSA:3.40.50.300 4 196 1.6E-58 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27305 da9efabcf8477615b5635ef9023c80c7 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 23.298 T 13-09-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27305 da9efabcf8477615b5635ef9023c80c7 121 Gene3D G3DSA:3.30.1390.10 51 121 2.7E-30 T 13-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PMA3_RS27305 da9efabcf8477615b5635ef9023c80c7 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 47 1.3E-15 T 13-09-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27305 da9efabcf8477615b5635ef9023c80c7 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 4.0E-41 T 13-09-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27305 da9efabcf8477615b5635ef9023c80c7 121 Gene3D G3DSA:1.20.5.710 2 50 3.6E-20 T 13-09-2016 PMA3_RS27305 da9efabcf8477615b5635ef9023c80c7 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 121 4.0E-19 T 13-09-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 PMA3_RS27305 da9efabcf8477615b5635ef9023c80c7 121 SUPERFAMILY SSF54736 50 121 8.2E-23 T 13-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PMA3_RS27305 da9efabcf8477615b5635ef9023c80c7 121 SUPERFAMILY SSF48300 4 57 8.89E-14 T 13-09-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27305 da9efabcf8477615b5635ef9023c80c7 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 3.8E-27 T 13-09-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 PMA3_RS20730 2c17b82388783faf3eaadfd8c19d2daf 469 SUPERFAMILY SSF56059 315 460 7.95E-65 T 13-09-2016 PMA3_RS20730 2c17b82388783faf3eaadfd8c19d2daf 469 SUPERFAMILY SSF56059 15 210 7.95E-65 T 13-09-2016 PMA3_RS20730 2c17b82388783faf3eaadfd8c19d2daf 469 PIRSF PIRSF005522 1 469 9.9E-232 T 13-09-2016 IPR016450 Uncharacterised conserved protein UCP005522 PMA3_RS20730 2c17b82388783faf3eaadfd8c19d2daf 469 PANTHER PTHR34595 1 469 9.6E-299 T 13-09-2016 PMA3_RS20730 2c17b82388783faf3eaadfd8c19d2daf 469 Pfam PF14403 Circularly permuted ATP-grasp type 2 72 445 1.0E-161 T 13-09-2016 IPR025841 Circularly permuted ATP-grasp type 2 PMA3_RS20730 2c17b82388783faf3eaadfd8c19d2daf 469 PANTHER PTHR34595:SF3 1 469 9.6E-299 T 13-09-2016 PMA3_RS16630 d008b70142cc43ab27b1cfc14e3fab44 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 372 8.0E-106 T 13-09-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PMA3_RS16630 d008b70142cc43ab27b1cfc14e3fab44 386 Gene3D G3DSA:3.40.50.1970 5 190 1.4E-49 T 13-09-2016 PMA3_RS16630 d008b70142cc43ab27b1cfc14e3fab44 386 PANTHER PTHR11496:SF75 1 382 8.1E-100 T 13-09-2016 PMA3_RS16630 d008b70142cc43ab27b1cfc14e3fab44 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 179 207 - T 13-09-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PMA3_RS16630 d008b70142cc43ab27b1cfc14e3fab44 386 Gene3D G3DSA:1.20.1090.10 191 382 2.5E-53 T 13-09-2016 PMA3_RS16630 d008b70142cc43ab27b1cfc14e3fab44 386 PANTHER PTHR11496 1 382 8.1E-100 T 13-09-2016 PMA3_RS16630 d008b70142cc43ab27b1cfc14e3fab44 386 SUPERFAMILY SSF56796 6 384 4.06E-116 T 13-09-2016 PMA3_RS09940 b8c721b00cb5aa017ea2254cea8843b1 187 PANTHER PTHR33303 8 187 1.2E-61 T 13-09-2016 PMA3_RS09940 b8c721b00cb5aa017ea2254cea8843b1 187 SUPERFAMILY SSF55729 30 173 3.26E-18 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS09940 b8c721b00cb5aa017ea2254cea8843b1 187 Gene3D G3DSA:3.40.630.30 34 171 7.8E-15 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS09940 b8c721b00cb5aa017ea2254cea8843b1 187 Pfam PF00583 Acetyltransferase (GNAT) family 95 170 3.7E-8 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS09940 b8c721b00cb5aa017ea2254cea8843b1 187 PANTHER PTHR33303:SF4 8 187 1.2E-61 T 13-09-2016 PMA3_RS07590 798e5530a9d001e76ee66ba8e86d2c36 473 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 325 353 - T 13-09-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PMA3_RS07590 798e5530a9d001e76ee66ba8e86d2c36 473 Gene3D G3DSA:1.10.530.10 285 457 3.1E-38 T 13-09-2016 PMA3_RS07590 798e5530a9d001e76ee66ba8e86d2c36 473 Gene3D G3DSA:3.40.190.10 14 175 3.3E-5 T 13-09-2016 PMA3_RS07590 798e5530a9d001e76ee66ba8e86d2c36 473 PANTHER PTHR21666:SF206 287 471 4.3E-62 T 13-09-2016 PMA3_RS07590 798e5530a9d001e76ee66ba8e86d2c36 473 PANTHER PTHR21666 287 471 4.3E-62 T 13-09-2016 PMA3_RS07590 798e5530a9d001e76ee66ba8e86d2c36 473 SUPERFAMILY SSF53955 281 434 2.11E-32 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS07590 798e5530a9d001e76ee66ba8e86d2c36 473 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 92 267 5.1E-6 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS07590 798e5530a9d001e76ee66ba8e86d2c36 473 Pfam PF01464 Transglycosylase SLT domain 309 417 1.9E-17 T 13-09-2016 IPR008258 Transglycosylase SLT domain 1 PMA3_RS07590 798e5530a9d001e76ee66ba8e86d2c36 473 SUPERFAMILY SSF53850 47 274 7.51E-21 T 13-09-2016 PMA3_RS21765 32be280b4cce01006b3f609e43320d2a 461 PANTHER PTHR30288:SF0 2 458 2.7E-49 T 13-09-2016 PMA3_RS21765 32be280b4cce01006b3f609e43320d2a 461 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 212 441 2.9E-52 T 13-09-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 PMA3_RS21765 32be280b4cce01006b3f609e43320d2a 461 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 5.7E-18 T 13-09-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 PMA3_RS21765 32be280b4cce01006b3f609e43320d2a 461 PANTHER PTHR30288 2 458 2.7E-49 T 13-09-2016 PMA3_RS21765 32be280b4cce01006b3f609e43320d2a 461 Pfam PF07196 Flagellin hook IN motif 131 186 1.9E-10 T 13-09-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 PMA3_RS11725 e75065dc9c88528affe3f13a3745e29e 255 Gene3D G3DSA:3.40.50.720 5 250 2.2E-52 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11725 e75065dc9c88528affe3f13a3745e29e 255 PANTHER PTHR24322 6 112 6.0E-19 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11725 e75065dc9c88528affe3f13a3745e29e 255 PANTHER PTHR24322 153 189 6.0E-19 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11725 e75065dc9c88528affe3f13a3745e29e 255 SUPERFAMILY SSF51735 2 249 8.32E-48 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11725 e75065dc9c88528affe3f13a3745e29e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.3E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11725 e75065dc9c88528affe3f13a3745e29e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.3E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11725 e75065dc9c88528affe3f13a3745e29e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.3E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11725 e75065dc9c88528affe3f13a3745e29e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.3E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11725 e75065dc9c88528affe3f13a3745e29e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 61 72 1.3E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11725 e75065dc9c88528affe3f13a3745e29e 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 150 246 1.4E-24 T 13-09-2016 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 SUPERFAMILY SSF52540 181 501 6.65E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 Gene3D G3DSA:1.10.8.60 366 449 4.7E-28 T 13-09-2016 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 Gene3D G3DSA:3.40.50.300 552 784 4.0E-47 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 316 328 - T 13-09-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 PANTHER PTHR11638 1 143 0.0 T 13-09-2016 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 PANTHER PTHR11638 528 860 0.0 T 13-09-2016 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 SMART SM01086 771 864 6.6E-7 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 10 855 0.0 T 13-09-2016 IPR017729 Type VI secretion system, ATPase ClpV1 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 Gene3D G3DSA:1.10.1780.10 7 139 2.5E-19 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 1.5E-32 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 1.5E-32 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 1.5E-32 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 1.5E-32 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 225 337 1.4E-8 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 73 5.0E-4 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 SUPERFAMILY SSF52540 548 843 1.14E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 PANTHER PTHR11638:SF122 1 143 0.0 T 13-09-2016 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 PANTHER PTHR11638:SF122 528 860 0.0 T 13-09-2016 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 SMART SM00382 599 750 3.3E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 SMART SM00382 220 365 3.1E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 Gene3D G3DSA:3.40.50.300 182 364 9.6E-42 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 SUPERFAMILY SSF81923 9 128 3.14E-18 T 13-09-2016 IPR004176 Clp, N-terminal GO:0019538 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 PANTHER PTHR11638:SF122 162 509 0.0 T 13-09-2016 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 765 1.7E-42 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 Gene3D G3DSA:1.10.8.60 785 856 5.3E-10 T 13-09-2016 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 PANTHER PTHR11638 162 509 0.0 T 13-09-2016 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 633 651 - T 13-09-2016 IPR028299 ClpA/B, conserved site 2 PMA3_RS11315 1b9373e921a27874e9b7e8af95244e13 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 775 845 5.3E-12 T 13-09-2016 IPR019489 Clp ATPase, C-terminal PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 405 9.9E-130 T 13-09-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 404 2.4E-118 T 13-09-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 PIRSF PIRSF000726 58 412 1.9E-148 T 13-09-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 PANTHER PTHR21499 1 413 1.1E-173 T 13-09-2016 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 SUPERFAMILY SSF55021 250 328 8.02E-18 T 13-09-2016 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 Pfam PF01842 ACT domain 269 326 1.1E-9 T 13-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 PANTHER PTHR21499:SF27 1 413 1.1E-173 T 13-09-2016 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 Pfam PF00696 Amino acid kinase family 3 231 4.7E-49 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 13-09-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 SUPERFAMILY SSF55021 331 406 1.31E-24 T 13-09-2016 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 Pfam PF13840 ACT domain 341 400 7.6E-15 T 13-09-2016 IPR027795 GATS-like ACT domain PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 SUPERFAMILY SSF53633 4 243 2.23E-72 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS05675 e7fe1a508abf6defe888a5376332ccc5 413 Gene3D G3DSA:3.40.1160.10 1 248 1.7E-73 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 SUPERFAMILY SSF54719 88 201 1.01E-43 T 13-09-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 SUPERFAMILY SSF46609 1 90 2.23E-37 T 13-09-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 13-09-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 Gene3D G3DSA:1.10.287.990 20 89 2.9E-30 T 13-09-2016 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 7.1E-39 T 13-09-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 PANTHER PTHR11404 1 202 6.8E-104 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 1.5E-26 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-26 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 1.5E-26 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-26 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 1.5E-26 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 4.8E-33 T 13-09-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS25135 044c4b13207b2821a096ff99e0fd6747 203 PIRSF PIRSF000349 1 203 8.1E-82 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 SMART SM00065 139 286 1.8E-5 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 123 6.8E-23 T 13-09-2016 IPR000014 PAS domain PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 Pfam PF00990 Diguanylate cyclase, GGDEF domain 289 443 1.7E-48 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 PANTHER PTHR10799 255 442 1.6E-42 T 13-09-2016 PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 SUPERFAMILY SSF55785 18 123 4.68E-28 T 13-09-2016 IPR000014 PAS domain PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 SMART SM00091 7 73 2.7E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 Gene3D G3DSA:3.30.450.20 17 120 2.0E-26 T 13-09-2016 PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 Gene3D G3DSA:3.30.450.40 121 290 2.0E-24 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 PANTHER PTHR10799:SF774 255 442 1.6E-42 T 13-09-2016 PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 SUPERFAMILY SSF55781 119 284 1.22E-22 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 Pfam PF13185 GAF domain 140 277 1.5E-12 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 SUPERFAMILY SSF55073 294 443 4.63E-49 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 285 443 8.5E-44 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 SMART SM00267 278 448 2.7E-58 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 Gene3D G3DSA:3.30.70.270 291 443 1.7E-56 T 13-09-2016 PMA3_RS22770 03d5d8303f643061bba11969823e7a91 449 Pfam PF08447 PAS fold 30 99 3.6E-15 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS06295 57b669ac4f2e49c5f6c201443563586c 242 PANTHER PTHR37844 1 242 5.0E-27 T 13-09-2016 PMA3_RS06295 57b669ac4f2e49c5f6c201443563586c 242 SUPERFAMILY SSF56300 1 107 9.97E-27 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS06295 57b669ac4f2e49c5f6c201443563586c 242 SUPERFAMILY SSF56300 146 233 9.97E-27 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS06295 57b669ac4f2e49c5f6c201443563586c 242 Pfam PF00149 Calcineurin-like phosphoesterase 5 209 6.5E-11 T 13-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PMA3_RS06295 57b669ac4f2e49c5f6c201443563586c 242 Gene3D G3DSA:3.60.21.10 138 221 3.1E-17 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS06295 57b669ac4f2e49c5f6c201443563586c 242 Gene3D G3DSA:3.60.21.10 1 63 3.1E-17 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS04505 1c84703eefefa10665d34b7575e1f5ca 95 Pfam PF12021 Protein of unknown function (DUF3509) 4 87 3.1E-29 T 13-09-2016 IPR021898 Protein of unknown function DUF3509 PMA3_RS24375 f3a4a2822cd97bb53a13772bd398be78 519 SMART SM00928 425 471 3.0E-15 T 13-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PMA3_RS24375 f3a4a2822cd97bb53a13772bd398be78 519 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 427 511 4.4E-27 T 13-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PMA3_RS24375 f3a4a2822cd97bb53a13772bd398be78 519 SUPERFAMILY SSF140490 422 510 1.14E-24 T 13-09-2016 PMA3_RS24375 f3a4a2822cd97bb53a13772bd398be78 519 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 145 315 4.0E-45 T 13-09-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain PMA3_RS24375 f3a4a2822cd97bb53a13772bd398be78 519 PANTHER PTHR11780:SF0 1 510 1.4E-212 T 13-09-2016 PMA3_RS24375 f3a4a2822cd97bb53a13772bd398be78 519 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 438 449 - T 13-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 PMA3_RS24375 f3a4a2822cd97bb53a13772bd398be78 519 SUPERFAMILY SSF142984 339 420 2.62E-21 T 13-09-2016 PMA3_RS24375 f3a4a2822cd97bb53a13772bd398be78 519 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 263 278 - T 13-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 PMA3_RS24375 f3a4a2822cd97bb53a13772bd398be78 519 PANTHER PTHR11780 1 510 1.4E-212 T 13-09-2016 PMA3_RS24375 f3a4a2822cd97bb53a13772bd398be78 519 SUPERFAMILY SSF142019 96 334 6.93E-83 T 13-09-2016 PMA3_RS00930 73bce9b234bbd57776002f48c44dfd38 368 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 6 364 9.8E-174 T 13-09-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PMA3_RS00930 73bce9b234bbd57776002f48c44dfd38 368 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 15 363 1.2E-124 T 13-09-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PMA3_RS00930 73bce9b234bbd57776002f48c44dfd38 368 SUPERFAMILY SSF55909 2 364 2.86E-143 T 13-09-2016 PMA3_RS00930 73bce9b234bbd57776002f48c44dfd38 368 PANTHER PTHR31377 1 368 9.6E-187 T 13-09-2016 PMA3_RS00930 73bce9b234bbd57776002f48c44dfd38 368 Gene3D G3DSA:3.75.10.10 3 364 2.5E-151 T 13-09-2016 PMA3_RS00930 73bce9b234bbd57776002f48c44dfd38 368 Hamap MF_01841 Agmatine deiminase [aguA]. 6 364 61.427 T 13-09-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PMA3_RS00930 73bce9b234bbd57776002f48c44dfd38 368 PANTHER PTHR31377:SF2 1 368 9.6E-187 T 13-09-2016 PMA3_RS22355 841a2a7ba5d0a4a8f787c481551f1443 197 PANTHER PTHR23026 18 195 2.9E-19 T 13-09-2016 PMA3_RS22355 841a2a7ba5d0a4a8f787c481551f1443 197 Gene3D G3DSA:3.40.109.10 8 193 8.3E-47 T 13-09-2016 IPR000415 Nitroreductase-like GO:0016491 PMA3_RS22355 841a2a7ba5d0a4a8f787c481551f1443 197 SUPERFAMILY SSF55469 6 194 3.01E-47 T 13-09-2016 IPR000415 Nitroreductase-like GO:0016491 PMA3_RS22355 841a2a7ba5d0a4a8f787c481551f1443 197 Pfam PF00881 Nitroreductase family 18 62 5.6E-12 T 13-09-2016 IPR029479 Nitroreductase PMA3_RS22355 841a2a7ba5d0a4a8f787c481551f1443 197 Pfam PF00881 Nitroreductase family 84 163 1.1E-4 T 13-09-2016 IPR029479 Nitroreductase PMA3_RS12980 e7725f44185e5392f4148a86c90a9342 220 PANTHER PTHR26402:SF279 1 220 3.8E-99 T 13-09-2016 PMA3_RS12980 e7725f44185e5392f4148a86c90a9342 220 Gene3D G3DSA:3.40.50.2300 2 121 2.3E-39 T 13-09-2016 PMA3_RS12980 e7725f44185e5392f4148a86c90a9342 220 Gene3D G3DSA:1.10.10.10 124 218 8.9E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12980 e7725f44185e5392f4148a86c90a9342 220 PANTHER PTHR26402 1 220 3.8E-99 T 13-09-2016 PMA3_RS12980 e7725f44185e5392f4148a86c90a9342 220 SMART SM00448 1 112 1.8E-40 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12980 e7725f44185e5392f4148a86c90a9342 220 SUPERFAMILY SSF46894 118 216 2.27E-27 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS12980 e7725f44185e5392f4148a86c90a9342 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 1.3E-22 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS12980 e7725f44185e5392f4148a86c90a9342 220 Pfam PF00072 Response regulator receiver domain 4 112 2.6E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS12980 e7725f44185e5392f4148a86c90a9342 220 SUPERFAMILY SSF52172 2 124 3.13E-39 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS12980 e7725f44185e5392f4148a86c90a9342 220 SMART SM00862 145 216 2.9E-25 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 SMART SM00411 1 91 2.1E-43 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 PANTHER PTHR33175 1 96 3.0E-49 T 13-09-2016 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 PANTHER PTHR33175:SF5 1 96 3.0E-49 T 13-09-2016 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 13-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 Gene3D G3DSA:4.10.520.10 1 92 1.4E-33 T 13-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.061 T 13-09-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.1E-28 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 94 5.4E-52 T 13-09-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.7E-18 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.7E-18 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.7E-18 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS20935 709a0cc43974ab2912aa709f8bd893d9 98 SUPERFAMILY SSF47729 1 93 1.91E-30 T 13-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 PANTHER PTHR10909:SF296 1 477 2.9E-262 T 13-09-2016 PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 1.1E-11 T 13-09-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 7.8E-17 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 SUPERFAMILY SSF56645 38 275 6.15E-55 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 Gene3D G3DSA:1.20.140.10 269 461 6.0E-51 T 13-09-2016 PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 585 1.2E-32 T 13-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 PANTHER PTHR10909 1 477 2.9E-262 T 13-09-2016 PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 5.6E-10 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 Gene3D G3DSA:1.10.540.10 38 160 2.6E-14 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 Gene3D G3DSA:2.40.110.10 162 268 1.4E-26 T 13-09-2016 PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 SUPERFAMILY SSF47203 289 474 2.9E-48 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS14190 ae3a6fd5625d62be0e35e32c219f54ed 592 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 5.4E-21 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS05305 2f4b1a36dbc46dfcc1c1f37e01695153 302 PANTHER PTHR30537:SF10 1 295 1.1E-127 T 13-09-2016 PMA3_RS05305 2f4b1a36dbc46dfcc1c1f37e01695153 302 Gene3D G3DSA:1.10.10.10 3 87 5.2E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05305 2f4b1a36dbc46dfcc1c1f37e01695153 302 PANTHER PTHR30537 1 295 1.1E-127 T 13-09-2016 PMA3_RS05305 2f4b1a36dbc46dfcc1c1f37e01695153 302 Gene3D G3DSA:3.40.190.10 93 177 1.1E-18 T 13-09-2016 PMA3_RS05305 2f4b1a36dbc46dfcc1c1f37e01695153 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.8E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS05305 2f4b1a36dbc46dfcc1c1f37e01695153 302 SUPERFAMILY SSF53850 89 295 2.71E-40 T 13-09-2016 PMA3_RS05305 2f4b1a36dbc46dfcc1c1f37e01695153 302 SUPERFAMILY SSF46785 4 88 2.73E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05305 2f4b1a36dbc46dfcc1c1f37e01695153 302 Gene3D G3DSA:3.40.190.10 178 259 1.2E-20 T 13-09-2016 PMA3_RS05305 2f4b1a36dbc46dfcc1c1f37e01695153 302 Pfam PF03466 LysR substrate binding domain 90 292 2.6E-39 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS12640 319ccea9ca4b9395bc3cb6b0a8ba9ce2 231 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS12640 319ccea9ca4b9395bc3cb6b0a8ba9ce2 231 Gene3D G3DSA:3.40.50.300 1 225 1.5E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12640 319ccea9ca4b9395bc3cb6b0a8ba9ce2 231 SMART SM00382 26 195 4.7E-9 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS12640 319ccea9ca4b9395bc3cb6b0a8ba9ce2 231 PANTHER PTHR24220 3 227 4.7E-104 T 13-09-2016 PMA3_RS12640 319ccea9ca4b9395bc3cb6b0a8ba9ce2 231 Pfam PF00005 ABC transporter 17 157 1.1E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS12640 319ccea9ca4b9395bc3cb6b0a8ba9ce2 231 PANTHER PTHR24220:SF568 3 227 4.7E-104 T 13-09-2016 PMA3_RS12640 319ccea9ca4b9395bc3cb6b0a8ba9ce2 231 SUPERFAMILY SSF52540 2 226 3.52E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26290 5fa9a32cda249d0628f7906ed69398aa 436 PIRSF PIRSF036492 1 435 9.9E-156 T 13-09-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 PMA3_RS26290 5fa9a32cda249d0628f7906ed69398aa 436 Gene3D G3DSA:3.40.309.10 230 412 1.3E-53 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS26290 5fa9a32cda249d0628f7906ed69398aa 436 Gene3D G3DSA:3.40.605.10 3 229 1.3E-59 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26290 5fa9a32cda249d0628f7906ed69398aa 436 PANTHER PTHR11699 1 434 3.4E-145 T 13-09-2016 PMA3_RS26290 5fa9a32cda249d0628f7906ed69398aa 436 Pfam PF00171 Aldehyde dehydrogenase family 7 432 3.5E-90 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26290 5fa9a32cda249d0628f7906ed69398aa 436 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 242 253 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS26290 5fa9a32cda249d0628f7906ed69398aa 436 SUPERFAMILY SSF53720 3 433 4.84E-116 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS02705 e64163a1302c7de96afa7fe8b355c1cc 164 Pfam PF02130 Uncharacterized protein family UPF0054 15 141 9.0E-39 T 13-09-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PMA3_RS02705 e64163a1302c7de96afa7fe8b355c1cc 164 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 3 145 23.853 T 13-09-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PMA3_RS02705 e64163a1302c7de96afa7fe8b355c1cc 164 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 111 121 - T 13-09-2016 IPR020549 Endoribonuclease YbeY, conserved site PMA3_RS02705 e64163a1302c7de96afa7fe8b355c1cc 164 PANTHER PTHR22881 1 148 2.4E-53 T 13-09-2016 PMA3_RS02705 e64163a1302c7de96afa7fe8b355c1cc 164 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 36 142 2.6E-37 T 13-09-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PMA3_RS02705 e64163a1302c7de96afa7fe8b355c1cc 164 Gene3D G3DSA:3.40.390.30 11 150 1.4E-52 T 13-09-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 PMA3_RS02705 e64163a1302c7de96afa7fe8b355c1cc 164 SUPERFAMILY SSF55486 12 151 5.86E-47 T 13-09-2016 PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 Gene3D G3DSA:4.10.1080.10 195 234 2.2E-7 T 13-09-2016 IPR028974 TSP type-3 repeat GO:0005509 PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 Gene3D G3DSA:2.40.160.20 41 192 7.4E-11 T 13-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 Gene3D G3DSA:3.30.1330.60 235 339 6.8E-41 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 PANTHER PTHR30128 169 342 1.8E-63 T 13-09-2016 PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 SUPERFAMILY SSF103647 191 225 1.83E-7 T 13-09-2016 IPR028974 TSP type-3 repeat GO:0005509 PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 PRINTS PR01021 OMPA domain signature 268 283 3.4E-17 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 PRINTS PR01021 OMPA domain signature 283 299 3.4E-17 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 PRINTS PR01021 OMPA domain signature 238 260 3.4E-17 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 PANTHER PTHR30128:SF10 169 342 1.8E-63 T 13-09-2016 PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 SUPERFAMILY SSF103088 223 338 1.24E-38 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 Pfam PF05736 OprF membrane domain 1 179 6.8E-86 T 13-09-2016 IPR008722 Outer membrane porin F, N-terminal PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 ProSitePatterns PS01068 OmpA-like domain. 270 315 - T 13-09-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 Pfam PF00691 OmpA family 238 333 4.1E-24 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS20435 3ed7a4e4c4bd1a916d8f19dd08ec4445 344 SUPERFAMILY SSF56925 39 181 2.46E-15 T 13-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 Pfam PF00512 His Kinase A (phospho-acceptor) domain 152 214 1.3E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 Gene3D G3DSA:1.10.287.130 145 203 3.0E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 352 1.2E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 371 1.2E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 326 1.2E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 1.2E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 Gene3D G3DSA:3.30.565.10 204 372 5.2E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 SUPERFAMILY SSF55874 220 373 6.81E-29 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 PANTHER PTHR24423 128 373 2.3E-45 T 13-09-2016 PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 SUPERFAMILY SSF47384 144 215 1.61E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 373 2.6E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 SMART SM00387 261 374 2.7E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS02370 35d8da4cd220bc86f488d42a1f421a25 374 SMART SM00388 151 217 9.3E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 Gene3D G3DSA:1.20.210.10 15 528 3.0E-212 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 SUPERFAMILY SSF81442 22 528 3.01E-190 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PANTHER PTHR10422:SF27 10 529 0.0 T 13-09-2016 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PANTHER PTHR10422 10 529 0.0 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 33 476 1.4E-150 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 25 528 5.2E-211 T 13-09-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 24 49 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 434 455 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 141 153 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 321 342 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 171 189 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 356 374 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 312 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 71 94 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 219 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 251 272 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 384 403 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 98 122 3.2E-119 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00105 2d0c0ef5195d47889fcf73f9860d5f2f 529 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 253 307 - T 13-09-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS04420 1ef77d422eee7a8ef936aac30ed07802 199 PANTHER PTHR12992 1 183 5.8E-54 T 13-09-2016 PMA3_RS04420 1ef77d422eee7a8ef936aac30ed07802 199 Gene3D G3DSA:3.90.79.10 7 183 6.4E-39 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS04420 1ef77d422eee7a8ef936aac30ed07802 199 SUPERFAMILY SSF55811 8 175 4.47E-33 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS04420 1ef77d422eee7a8ef936aac30ed07802 199 Pfam PF00293 NUDIX domain 26 105 1.1E-10 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS09960 9d0b85b1c22ce6e1af80d706283a0a2d 306 SUPERFAMILY SSF52402 155 301 8.2E-20 T 13-09-2016 PMA3_RS09960 9d0b85b1c22ce6e1af80d706283a0a2d 306 Pfam PF00582 Universal stress protein family 174 300 4.7E-14 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS09960 9d0b85b1c22ce6e1af80d706283a0a2d 306 Gene3D G3DSA:3.40.50.620 4 141 1.5E-9 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS09960 9d0b85b1c22ce6e1af80d706283a0a2d 306 SUPERFAMILY SSF52402 4 145 5.86E-13 T 13-09-2016 PMA3_RS09960 9d0b85b1c22ce6e1af80d706283a0a2d 306 PANTHER PTHR31964:SF41 1 88 1.2E-12 T 13-09-2016 PMA3_RS09960 9d0b85b1c22ce6e1af80d706283a0a2d 306 PANTHER PTHR31964:SF41 245 301 1.2E-12 T 13-09-2016 PMA3_RS09960 9d0b85b1c22ce6e1af80d706283a0a2d 306 Gene3D G3DSA:3.40.50.620 142 301 5.8E-21 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS09960 9d0b85b1c22ce6e1af80d706283a0a2d 306 PANTHER PTHR31964 1 88 1.2E-12 T 13-09-2016 PMA3_RS09960 9d0b85b1c22ce6e1af80d706283a0a2d 306 PANTHER PTHR31964 245 301 1.2E-12 T 13-09-2016 PMA3_RS18855 423cb9a7077652c1a598bd71eceafeda 280 SUPERFAMILY SSF46785 18 89 5.11E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18855 423cb9a7077652c1a598bd71eceafeda 280 Gene3D G3DSA:1.10.10.10 10 89 2.3E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18855 423cb9a7077652c1a598bd71eceafeda 280 SMART SM00346 18 106 1.7E-24 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS18855 423cb9a7077652c1a598bd71eceafeda 280 Pfam PF09339 IclR helix-turn-helix domain 21 70 1.0E-12 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS18855 423cb9a7077652c1a598bd71eceafeda 280 Gene3D G3DSA:3.30.450.40 90 263 8.6E-44 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS18855 423cb9a7077652c1a598bd71eceafeda 280 PANTHER PTHR30136 11 272 9.7E-94 T 13-09-2016 PMA3_RS18855 423cb9a7077652c1a598bd71eceafeda 280 SUPERFAMILY SSF55781 82 262 7.85E-40 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS18855 423cb9a7077652c1a598bd71eceafeda 280 Pfam PF01614 Bacterial transcriptional regulator 136 258 1.7E-21 T 13-09-2016 IPR014757 Transcription regulator IclR, C-terminal PMA3_RS18855 423cb9a7077652c1a598bd71eceafeda 280 PANTHER PTHR30136:SF10 11 272 9.7E-94 T 13-09-2016 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 6.6E-6 T 13-09-2016 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 379 6.6E-6 T 13-09-2016 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 SUPERFAMILY SSF46977 427 554 1.83E-36 T 13-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 PANTHER PTHR11632:SF6 1 571 6.1E-224 T 13-09-2016 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 Gene3D G3DSA:1.20.58.100 416 525 2.3E-37 T 13-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 Pfam PF02910 Fumarate reductase flavoprotein C-term 442 540 1.2E-11 T 13-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 Gene3D G3DSA:3.50.50.60 5 279 1.2E-67 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 Gene3D G3DSA:3.50.50.60 358 415 1.2E-67 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 Pfam PF00890 FAD binding domain 11 380 1.3E-36 T 13-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 379 5.9E-10 T 13-09-2016 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 5.9E-10 T 13-09-2016 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 PIRSF PIRSF000171 1 564 4.9E-233 T 13-09-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 SUPERFAMILY SSF51905 6 262 1.13E-62 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 SUPERFAMILY SSF51905 358 409 1.13E-62 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12020 90c2be5b24a9a076367541c199070705 576 PANTHER PTHR11632 1 571 6.1E-224 T 13-09-2016 PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 Pfam PF00425 chorismate binding enzyme 180 434 6.5E-96 T 13-09-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 SUPERFAMILY SSF56322 6 443 1.05E-139 T 13-09-2016 IPR005801 ADC synthase GO:0009058 PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 Gene3D G3DSA:3.60.120.10 5 443 2.7E-148 T 13-09-2016 IPR005801 ADC synthase GO:0009058 PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 PRINTS PR00095 Anthranilate synthase component I signature 282 295 1.5E-16 T 13-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 PRINTS PR00095 Anthranilate synthase component I signature 376 390 1.5E-16 T 13-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 PRINTS PR00095 Anthranilate synthase component I signature 391 405 1.5E-16 T 13-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 PRINTS PR00095 Anthranilate synthase component I signature 296 309 1.5E-16 T 13-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 Pfam PF04715 Anthranilate synthase component I, N terminal region 13 138 2.4E-23 T 13-09-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 PANTHER PTHR11236:SF18 1 445 4.2E-157 T 13-09-2016 PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 PANTHER PTHR11236 1 445 4.2E-157 T 13-09-2016 PMA3_RS20525 d0da951f931360183f321d2d12cb9e08 445 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 91 438 9.4E-110 T 13-09-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 PMA3_RS09430 6a4d74ca2f843374300b64c26da501f5 137 SUPERFAMILY SSF52788 5 130 9.42E-37 T 13-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PMA3_RS09430 6a4d74ca2f843374300b64c26da501f5 137 PANTHER PTHR11717 1 131 4.6E-35 T 13-09-2016 PMA3_RS09430 6a4d74ca2f843374300b64c26da501f5 137 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 130 4.1E-21 T 13-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PMA3_RS09430 6a4d74ca2f843374300b64c26da501f5 137 Gene3D G3DSA:3.40.50.270 4 130 4.7E-38 T 13-09-2016 PMA3_RS09430 6a4d74ca2f843374300b64c26da501f5 137 PANTHER PTHR11717:SF18 1 131 4.6E-35 T 13-09-2016 PMA3_RS09430 6a4d74ca2f843374300b64c26da501f5 137 SMART SM00226 5 133 2.5E-27 T 13-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PMA3_RS26170 d325288abf4e763fab4d41269c12ac79 351 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 205 1.9E-44 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS26170 d325288abf4e763fab4d41269c12ac79 351 PANTHER PTHR11019 166 342 4.2E-21 T 13-09-2016 PMA3_RS26170 d325288abf4e763fab4d41269c12ac79 351 Gene3D G3DSA:1.10.10.60 291 336 1.4E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26170 d325288abf4e763fab4d41269c12ac79 351 Pfam PF12833 Helix-turn-helix domain 258 335 5.7E-17 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS26170 d325288abf4e763fab4d41269c12ac79 351 SMART SM00342 252 334 2.7E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS26170 d325288abf4e763fab4d41269c12ac79 351 PANTHER PTHR11019:SF52 166 342 4.2E-21 T 13-09-2016 PMA3_RS26170 d325288abf4e763fab4d41269c12ac79 351 SUPERFAMILY SSF46689 287 335 5.73E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS19990 3ab05fa46d80b06a49d4ec8c13567349 330 SUPERFAMILY SSF54506 67 120 3.61E-6 T 13-09-2016 PMA3_RS19990 3ab05fa46d80b06a49d4ec8c13567349 330 PANTHER PTHR31689 66 317 3.5E-18 T 13-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS19990 3ab05fa46d80b06a49d4ec8c13567349 330 SUPERFAMILY SSF54506 191 315 4.71E-19 T 13-09-2016 PMA3_RS19990 3ab05fa46d80b06a49d4ec8c13567349 330 Gene3D G3DSA:3.10.310.10 155 313 1.1E-20 T 13-09-2016 PMA3_RS19990 3ab05fa46d80b06a49d4ec8c13567349 330 Pfam PF01678 Diaminopimelate epimerase 196 319 3.7E-10 T 13-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS19990 3ab05fa46d80b06a49d4ec8c13567349 330 Gene3D G3DSA:3.10.310.10 67 154 4.0E-11 T 13-09-2016 PMA3_RS19145 ecd213406fe4a4bfa0e55e09306a26b4 322 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 33 301 2.1E-63 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS19145 ecd213406fe4a4bfa0e55e09306a26b4 322 Gene3D G3DSA:3.40.190.10 31 115 1.8E-17 T 13-09-2016 PMA3_RS19145 ecd213406fe4a4bfa0e55e09306a26b4 322 Gene3D G3DSA:3.40.190.10 254 313 1.8E-17 T 13-09-2016 PMA3_RS19145 ecd213406fe4a4bfa0e55e09306a26b4 322 PANTHER PTHR30177:SF14 1 305 7.1E-154 T 13-09-2016 PMA3_RS19145 ecd213406fe4a4bfa0e55e09306a26b4 322 SUPERFAMILY SSF53850 28 317 4.7E-71 T 13-09-2016 PMA3_RS19145 ecd213406fe4a4bfa0e55e09306a26b4 322 Gene3D G3DSA:3.40.190.100 116 253 1.5E-40 T 13-09-2016 PMA3_RS19145 ecd213406fe4a4bfa0e55e09306a26b4 322 PANTHER PTHR30177 1 305 7.1E-154 T 13-09-2016 PMA3_RS12690 e315116ec296056fdbdb88f3d1991db1 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 1.4E-8 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS12690 e315116ec296056fdbdb88f3d1991db1 234 SUPERFAMILY SSF46689 22 80 1.95E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12690 e315116ec296056fdbdb88f3d1991db1 234 PANTHER PTHR30328:SF27 23 173 2.3E-18 T 13-09-2016 PMA3_RS12690 e315116ec296056fdbdb88f3d1991db1 234 Gene3D G3DSA:1.10.357.10 23 176 6.9E-16 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS12690 e315116ec296056fdbdb88f3d1991db1 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 4.2E-5 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS12690 e315116ec296056fdbdb88f3d1991db1 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 4.2E-5 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS12690 e315116ec296056fdbdb88f3d1991db1 234 PANTHER PTHR30328 23 173 2.3E-18 T 13-09-2016 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 Pfam PF03170 Bacterial cellulose synthase subunit 50 674 9.1E-199 T 13-09-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PRINTS PR01440 Cellulose synthase subunit B signature 519 538 5.2E-23 T 13-09-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PRINTS PR01440 Cellulose synthase subunit B signature 78 99 5.2E-23 T 13-09-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PRINTS PR01440 Cellulose synthase subunit B signature 384 405 5.2E-23 T 13-09-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PRINTS PR01440 Cellulose synthase subunit B signature 713 733 5.2E-23 T 13-09-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PRINTS PR01440 Cellulose synthase subunit B signature 168 189 5.2E-23 T 13-09-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PRINTS PR01440 Cellulose synthase subunit B signature 556 576 5.2E-23 T 13-09-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PRINTS PR01440 Cellulose synthase subunit B signature 210 233 5.2E-23 T 13-09-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PANTHER PTHR39083 472 772 6.1E-110 T 13-09-2016 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PANTHER PTHR39083 11 455 6.1E-110 T 13-09-2016 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PANTHER PTHR39083:SF1 472 772 6.1E-110 T 13-09-2016 PMA3_RS00350 dcd1f02fe3c392b23971e24fd41e8d72 772 PANTHER PTHR39083:SF1 11 455 6.1E-110 T 13-09-2016 PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 138 2.0E-10 T 13-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 SUPERFAMILY SSF51604 186 433 9.17E-66 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 PANTHER PTHR13794:SF58 2 153 6.2E-187 T 13-09-2016 PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 SMART SM00922 201 297 1.2E-22 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 PANTHER PTHR13794 2 153 6.2E-187 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 Gene3D G3DSA:3.20.20.120 184 428 2.2E-85 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 Pfam PF13378 Enolase C-terminal domain-like 204 418 3.0E-56 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 Gene3D G3DSA:3.30.390.10 2 180 4.5E-87 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 PANTHER PTHR13794 189 437 6.2E-187 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 SUPERFAMILY SSF54826 3 141 1.26E-39 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS19315 2e610e58e67e01565759e38657ac58dd 438 PANTHER PTHR13794:SF58 189 437 6.2E-187 T 13-09-2016 PMA3_RS15055 bfed37aa3f677b0d1889f92735f713a5 855 Pfam PF06958 S-type Pyocin 382 499 1.7E-6 T 13-09-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 PMA3_RS15055 bfed37aa3f677b0d1889f92735f713a5 855 SUPERFAMILY SSF54060 717 847 1.77E-45 T 13-09-2016 PMA3_RS15055 bfed37aa3f677b0d1889f92735f713a5 855 PRINTS PR01300 Pyocin S killer protein signature 530 551 1.8E-5 T 13-09-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 PMA3_RS15055 bfed37aa3f677b0d1889f92735f713a5 855 PRINTS PR01300 Pyocin S killer protein signature 278 299 1.8E-5 T 13-09-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 PMA3_RS15055 bfed37aa3f677b0d1889f92735f713a5 855 PRINTS PR01300 Pyocin S killer protein signature 497 516 1.8E-5 T 13-09-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 PMA3_RS15055 bfed37aa3f677b0d1889f92735f713a5 855 Gene3D G3DSA:3.90.540.10 718 849 2.7E-52 T 13-09-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 PMA3_RS15055 bfed37aa3f677b0d1889f92735f713a5 855 Gene3D G3DSA:3.90.540.10 508 626 1.2E-30 T 13-09-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 PMA3_RS15055 bfed37aa3f677b0d1889f92735f713a5 855 SUPERFAMILY SSF69369 311 528 2.35E-14 T 13-09-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 PMA3_RS15055 bfed37aa3f677b0d1889f92735f713a5 855 SUPERFAMILY SSF54060 508 627 2.3E-21 T 13-09-2016 PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 Gene3D G3DSA:3.40.50.720 4 256 1.1E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 PANTHER PTHR24319:SF23 1 257 5.7E-61 T 13-09-2016 PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 PANTHER PTHR24319 1 257 5.7E-61 T 13-09-2016 PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 256 2.8E-36 T 13-09-2016 PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 SUPERFAMILY SSF51735 7 257 2.74E-55 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.6E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.6E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.6E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.6E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14400 3b1cdc036993f51da4e1ad38776bef77 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.6E-21 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15010 40132d4dda3393a515a972370fef89ad 493 PANTHER PTHR30203 3 487 8.2E-188 T 13-09-2016 PMA3_RS15010 40132d4dda3393a515a972370fef89ad 493 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 28 482 2.7E-129 T 13-09-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PMA3_RS15010 40132d4dda3393a515a972370fef89ad 493 PANTHER PTHR30203:SF7 3 487 8.2E-188 T 13-09-2016 PMA3_RS15010 40132d4dda3393a515a972370fef89ad 493 SUPERFAMILY SSF56954 19 485 2.09E-111 T 13-09-2016 PMA3_RS15010 40132d4dda3393a515a972370fef89ad 493 Gene3D G3DSA:1.20.1600.10 69 485 4.1E-111 T 13-09-2016 PMA3_RS15010 40132d4dda3393a515a972370fef89ad 493 Pfam PF02321 Outer membrane efflux protein 80 273 1.9E-24 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS15010 40132d4dda3393a515a972370fef89ad 493 Pfam PF02321 Outer membrane efflux protein 296 480 9.1E-35 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS14255 94146512f39293051b910ea08426959a 351 Gene3D G3DSA:3.30.1780.10 1 138 3.1E-34 T 13-09-2016 IPR023401 Ornithine cyclodeaminase, N-terminal PMA3_RS14255 94146512f39293051b910ea08426959a 351 PANTHER PTHR13812 69 325 4.3E-48 T 13-09-2016 PMA3_RS14255 94146512f39293051b910ea08426959a 351 Gene3D G3DSA:3.40.50.720 139 295 4.6E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14255 94146512f39293051b910ea08426959a 351 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 13 313 9.4E-100 T 13-09-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin PMA3_RS14255 94146512f39293051b910ea08426959a 351 PANTHER PTHR13812:SF19 69 325 4.3E-48 T 13-09-2016 PMA3_RS14255 94146512f39293051b910ea08426959a 351 SUPERFAMILY SSF51735 1 336 1.75E-91 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14255 94146512f39293051b910ea08426959a 351 PIRSF PIRSF001439 1 323 1.3E-51 T 13-09-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin PMA3_RS02040 f7b46c2d04ec5f117c5666a23bc4c817 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 132 1.3E-39 T 13-09-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PMA3_RS02040 f7b46c2d04ec5f117c5666a23bc4c817 156 Gene3D G3DSA:3.40.50.300 4 150 1.4E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02040 f7b46c2d04ec5f117c5666a23bc4c817 156 PANTHER PTHR33540:SF2 3 151 4.6E-46 T 13-09-2016 PMA3_RS02040 f7b46c2d04ec5f117c5666a23bc4c817 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 4.5E-48 T 13-09-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PMA3_RS02040 f7b46c2d04ec5f117c5666a23bc4c817 156 SUPERFAMILY SSF52540 26 131 2.61E-24 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02040 f7b46c2d04ec5f117c5666a23bc4c817 156 PANTHER PTHR33540 3 151 4.6E-46 T 13-09-2016 PMA3_RS02175 3aa53019f82383013b17c7feb59b5142 828 PANTHER PTHR34595 4 828 0.0 T 13-09-2016 PMA3_RS02175 3aa53019f82383013b17c7feb59b5142 828 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 509 815 3.3E-66 T 13-09-2016 IPR007296 Domain of unknown function DUF403 PMA3_RS02175 3aa53019f82383013b17c7feb59b5142 828 PANTHER PTHR34595:SF1 4 828 0.0 T 13-09-2016 PMA3_RS02175 3aa53019f82383013b17c7feb59b5142 828 Pfam PF14403 Circularly permuted ATP-grasp type 2 81 459 6.2E-163 T 13-09-2016 IPR025841 Circularly permuted ATP-grasp type 2 PMA3_RS02175 3aa53019f82383013b17c7feb59b5142 828 SUPERFAMILY SSF56059 326 445 1.62E-24 T 13-09-2016 PMA3_RS02175 3aa53019f82383013b17c7feb59b5142 828 SUPERFAMILY SSF56059 25 219 1.62E-24 T 13-09-2016 PMA3_RS10055 6989c53283b53092b9e91e79a9fdadb0 483 Gene3D G3DSA:3.40.309.10 266 453 5.7E-69 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS10055 6989c53283b53092b9e91e79a9fdadb0 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS10055 6989c53283b53092b9e91e79a9fdadb0 483 SUPERFAMILY SSF53720 5 480 1.24E-156 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS10055 6989c53283b53092b9e91e79a9fdadb0 483 Gene3D G3DSA:3.40.605.10 7 265 1.0E-86 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS10055 6989c53283b53092b9e91e79a9fdadb0 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS10055 6989c53283b53092b9e91e79a9fdadb0 483 PANTHER PTHR11699:SF200 9 480 8.4E-218 T 13-09-2016 PMA3_RS10055 6989c53283b53092b9e91e79a9fdadb0 483 PANTHER PTHR11699 9 480 8.4E-218 T 13-09-2016 PMA3_RS10055 6989c53283b53092b9e91e79a9fdadb0 483 Pfam PF00171 Aldehyde dehydrogenase family 21 478 4.2E-160 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS23130 d6f76d31ebff90b99eb2e1dfa9b43385 154 ProSitePatterns PS01335 Methylglyoxal synthase active site. 68 76 - T 13-09-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 PMA3_RS23130 d6f76d31ebff90b99eb2e1dfa9b43385 154 PANTHER PTHR30492 5 150 1.0E-73 T 13-09-2016 PMA3_RS23130 d6f76d31ebff90b99eb2e1dfa9b43385 154 PIRSF PIRSF006614 11 154 2.1E-60 T 13-09-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 PMA3_RS23130 d6f76d31ebff90b99eb2e1dfa9b43385 154 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 15 134 34.865 T 13-09-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 PMA3_RS23130 d6f76d31ebff90b99eb2e1dfa9b43385 154 SUPERFAMILY SSF52335 10 152 1.78E-52 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS23130 d6f76d31ebff90b99eb2e1dfa9b43385 154 Gene3D G3DSA:3.40.50.1380 7 150 3.8E-59 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS23130 d6f76d31ebff90b99eb2e1dfa9b43385 154 SMART SM00851 28 121 1.0E-24 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS23130 d6f76d31ebff90b99eb2e1dfa9b43385 154 Pfam PF02142 MGS-like domain 29 120 5.8E-17 T 13-09-2016 IPR011607 Methylglyoxal synthase-like domain PMA3_RS23130 d6f76d31ebff90b99eb2e1dfa9b43385 154 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 14 152 1.1E-55 T 13-09-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 PMA3_RS26335 83e1e608f0f5e6703f38585d669d6240 527 PANTHER PTHR11785 153 504 6.6E-33 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS26335 83e1e608f0f5e6703f38585d669d6240 527 PANTHER PTHR11785 8 133 6.6E-33 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS26335 83e1e608f0f5e6703f38585d669d6240 527 Pfam PF13520 Amino acid permease 15 454 1.4E-85 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS26335 83e1e608f0f5e6703f38585d669d6240 527 PIRSF PIRSF006060 1 508 5.5E-71 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS10425 ddd72bb3adaff1e81c4eff62f6afdeb2 358 SUPERFAMILY SSF50939 49 316 1.29E-37 T 13-09-2016 IPR011040 Sialidases PMA3_RS10425 ddd72bb3adaff1e81c4eff62f6afdeb2 358 Gene3D G3DSA:2.130.10.10 54 337 7.1E-29 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS10425 ddd72bb3adaff1e81c4eff62f6afdeb2 358 Pfam PF14870 Photosynthesis system II assembly factor YCF48 61 120 1.7E-7 T 13-09-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain PMA3_RS10425 ddd72bb3adaff1e81c4eff62f6afdeb2 358 Pfam PF14870 Photosynthesis system II assembly factor YCF48 162 351 9.4E-14 T 13-09-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 PIRSF PIRSF000151 1 419 2.4E-176 T 13-09-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 Pfam PF00171 Aldehyde dehydrogenase family 14 286 4.5E-14 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 Pfam PF00171 Aldehyde dehydrogenase family 300 374 5.2E-6 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 407 4.2E-145 T 13-09-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 13-09-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 Gene3D G3DSA:3.40.605.10 3 227 4.4E-103 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 Gene3D G3DSA:3.40.605.10 377 418 4.4E-103 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 Gene3D G3DSA:3.40.309.10 229 376 7.7E-40 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 PANTHER PTHR11063:SF8 1 418 8.9E-172 T 13-09-2016 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 418 41.09 T 13-09-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 PANTHER PTHR11063 1 418 8.9E-172 T 13-09-2016 PMA3_RS26610 a9eb2ed8c6b890b9152c5388ab7db191 423 SUPERFAMILY SSF53720 8 418 8.12E-118 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 Gene3D G3DSA:3.40.50.980 78 263 2.1E-45 T 13-09-2016 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 Gene3D G3DSA:3.30.300.30 515 628 1.9E-25 T 13-09-2016 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 SUPERFAMILY SSF56801 13 637 1.14E-181 T 13-09-2016 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 640 0.0 T 13-09-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 PANTHER PTHR24095 7 642 0.0 T 13-09-2016 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 642 52.172 T 13-09-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 PANTHER PTHR24095:SF178 7 642 0.0 T 13-09-2016 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 80 4.2E-21 T 13-09-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 Pfam PF13193 AMP-binding enzyme C-terminal domain 528 606 4.0E-23 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 Gene3D G3DSA:2.30.38.10 437 513 1.1E-6 T 13-09-2016 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 Pfam PF00501 AMP-binding enzyme 82 519 1.1E-89 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 Gene3D G3DSA:3.40.50.980 264 426 3.1E-27 T 13-09-2016 PMA3_RS03445 fee1b0b113080a07a7c1436ba9e17181 645 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS04010 7fddce54bef944c9f1e4baf98b29b13b 295 Gene3D G3DSA:3.60.110.10 7 284 1.5E-80 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS04010 7fddce54bef944c9f1e4baf98b29b13b 295 PANTHER PTHR23088 6 287 2.9E-76 T 13-09-2016 PMA3_RS04010 7fddce54bef944c9f1e4baf98b29b13b 295 SUPERFAMILY SSF56317 6 284 2.88E-74 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS04010 7fddce54bef944c9f1e4baf98b29b13b 295 Pfam PF00795 Carbon-nitrogen hydrolase 9 263 1.1E-50 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS21375 5642fecd90fd6301287b960db0cc55b5 304 Gene3D G3DSA:1.10.3430.10 8 286 2.1E-62 T 13-09-2016 IPR029020 Ammonium/urea transporter PMA3_RS21375 5642fecd90fd6301287b960db0cc55b5 304 Pfam PF03253 Urea transporter 16 277 4.6E-55 T 13-09-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 PMA3_RS21375 5642fecd90fd6301287b960db0cc55b5 304 PANTHER PTHR10464 17 277 3.2E-38 T 13-09-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 PMA3_RS21375 5642fecd90fd6301287b960db0cc55b5 304 PANTHER PTHR10464:SF7 17 277 3.2E-38 T 13-09-2016 PMA3_RS28650 03ce9676261428ab54e5cba3e7820d14 398 PANTHER PTHR11061:SF12 3 398 9.7E-103 T 13-09-2016 PMA3_RS28650 03ce9676261428ab54e5cba3e7820d14 398 SUPERFAMILY SSF88697 4 73 4.97E-10 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS28650 03ce9676261428ab54e5cba3e7820d14 398 SUPERFAMILY SSF53335 85 391 7.55E-71 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS28650 03ce9676261428ab54e5cba3e7820d14 398 Gene3D G3DSA:3.40.50.150 185 394 8.3E-61 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS28650 03ce9676261428ab54e5cba3e7820d14 398 Gene3D G3DSA:3.30.750.80 78 180 9.4E-31 T 13-09-2016 PMA3_RS28650 03ce9676261428ab54e5cba3e7820d14 398 PANTHER PTHR11061 3 398 9.7E-103 T 13-09-2016 PMA3_RS28650 03ce9676261428ab54e5cba3e7820d14 398 Gene3D G3DSA:2.30.130.10 5 73 1.7E-11 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS28650 03ce9676261428ab54e5cba3e7820d14 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 173 346 1.7E-18 T 13-09-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PMA3_RS26025 2309aae1a3e762fba678ab20b7839e69 497 Pfam PF00239 Resolvase, N terminal domain 1 139 2.6E-17 T 13-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PMA3_RS26025 2309aae1a3e762fba678ab20b7839e69 497 SUPERFAMILY SSF53041 1 145 3.14E-18 T 13-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PMA3_RS26025 2309aae1a3e762fba678ab20b7839e69 497 Gene3D G3DSA:3.40.50.1390 2 123 3.3E-12 T 13-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PMA3_RS26025 2309aae1a3e762fba678ab20b7839e69 497 Pfam PF07508 Recombinase 191 295 1.3E-22 T 13-09-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 PMA3_RS26025 2309aae1a3e762fba678ab20b7839e69 497 SMART SM00857 1 146 6.8E-27 T 13-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PMA3_RS26025 2309aae1a3e762fba678ab20b7839e69 497 PANTHER PTHR30461:SF7 1 496 1.2E-165 T 13-09-2016 PMA3_RS26025 2309aae1a3e762fba678ab20b7839e69 497 PANTHER PTHR30461 1 496 1.2E-165 T 13-09-2016 PMA3_RS28120 ca9344f3959054a132373c419f3787b7 197 PANTHER PTHR30055 1 195 7.2E-110 T 13-09-2016 PMA3_RS28120 ca9344f3959054a132373c419f3787b7 197 Gene3D G3DSA:1.10.357.10 1 193 3.5E-44 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS28120 ca9344f3959054a132373c419f3787b7 197 PANTHER PTHR30055:SF61 1 195 7.2E-110 T 13-09-2016 PMA3_RS28120 ca9344f3959054a132373c419f3787b7 197 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 197 107.58 T 13-09-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 PMA3_RS28120 ca9344f3959054a132373c419f3787b7 197 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 4.8E-74 T 13-09-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 PMA3_RS28120 ca9344f3959054a132373c419f3787b7 197 SUPERFAMILY SSF46689 5 79 8.21E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28120 ca9344f3959054a132373c419f3787b7 197 SUPERFAMILY SSF48498 81 193 2.74E-19 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS28120 ca9344f3959054a132373c419f3787b7 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 13-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PMA3_RS28120 ca9344f3959054a132373c419f3787b7 197 Pfam PF13977 Bacterial transcriptional repressor 84 192 2.7E-33 T 13-09-2016 PMA3_RS28120 ca9344f3959054a132373c419f3787b7 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 7.4E-9 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS03400 a45d4ccabf12ded411a1e47018fe63f0 290 PANTHER PTHR30487:SF0 59 290 4.0E-110 T 13-09-2016 PMA3_RS03400 a45d4ccabf12ded411a1e47018fe63f0 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 213 224 1.0E-24 T 13-09-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PMA3_RS03400 a45d4ccabf12ded411a1e47018fe63f0 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 225 240 1.0E-24 T 13-09-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PMA3_RS03400 a45d4ccabf12ded411a1e47018fe63f0 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 202 212 1.0E-24 T 13-09-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PMA3_RS03400 a45d4ccabf12ded411a1e47018fe63f0 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 145 162 1.0E-24 T 13-09-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PMA3_RS03400 a45d4ccabf12ded411a1e47018fe63f0 290 PANTHER PTHR30487 59 290 4.0E-110 T 13-09-2016 PMA3_RS03400 a45d4ccabf12ded411a1e47018fe63f0 290 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 126 2.0E-34 T 13-09-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PMA3_RS03400 a45d4ccabf12ded411a1e47018fe63f0 290 PANTHER PTHR30487:SF0 2 38 4.0E-110 T 13-09-2016 PMA3_RS03400 a45d4ccabf12ded411a1e47018fe63f0 290 Pfam PF01478 Type IV leader peptidase family 136 245 2.7E-23 T 13-09-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PMA3_RS03400 a45d4ccabf12ded411a1e47018fe63f0 290 PANTHER PTHR30487 2 38 4.0E-110 T 13-09-2016 PMA3_RS20460 ff718943b7a27f72a9462e6482a84bef 163 PANTHER PTHR33254:SF7 3 161 5.5E-95 T 13-09-2016 PMA3_RS20460 ff718943b7a27f72a9462e6482a84bef 163 Gene3D G3DSA:3.50.30.40 3 159 8.5E-58 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS20460 ff718943b7a27f72a9462e6482a84bef 163 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 155 4.0E-72 T 13-09-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 PMA3_RS20460 ff718943b7a27f72a9462e6482a84bef 163 Pfam PF03737 Demethylmenaquinone methyltransferase 6 154 1.2E-46 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS20460 ff718943b7a27f72a9462e6482a84bef 163 SUPERFAMILY SSF89562 5 159 1.7E-52 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS20460 ff718943b7a27f72a9462e6482a84bef 163 PANTHER PTHR33254 3 161 5.5E-95 T 13-09-2016 PMA3_RS24455 f5a6edfe356ecb77196437634a6e408b 446 SUPERFAMILY SSF102114 147 373 4.71E-10 T 13-09-2016 PMA3_RS24455 f5a6edfe356ecb77196437634a6e408b 446 PANTHER PTHR30538:SF0 37 92 4.2E-116 T 13-09-2016 PMA3_RS24455 f5a6edfe356ecb77196437634a6e408b 446 PANTHER PTHR30538:SF0 125 432 4.2E-116 T 13-09-2016 PMA3_RS24455 f5a6edfe356ecb77196437634a6e408b 446 Gene3D G3DSA:3.20.20.70 146 354 4.8E-7 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS24455 f5a6edfe356ecb77196437634a6e408b 446 PANTHER PTHR30538 125 432 4.2E-116 T 13-09-2016 PMA3_RS24455 f5a6edfe356ecb77196437634a6e408b 446 PANTHER PTHR30538 37 92 4.2E-116 T 13-09-2016 PMA3_RS19420 31a17058e53aaa0d403d9768357a7af1 410 PANTHER PTHR23522:SF1 1 384 1.9E-131 T 13-09-2016 PMA3_RS19420 31a17058e53aaa0d403d9768357a7af1 410 Gene3D G3DSA:1.20.1250.20 213 398 1.3E-19 T 13-09-2016 PMA3_RS19420 31a17058e53aaa0d403d9768357a7af1 410 Gene3D G3DSA:1.20.1250.20 9 188 5.4E-15 T 13-09-2016 PMA3_RS19420 31a17058e53aaa0d403d9768357a7af1 410 PANTHER PTHR23522 1 384 1.9E-131 T 13-09-2016 PMA3_RS19420 31a17058e53aaa0d403d9768357a7af1 410 Pfam PF03825 Nucleoside H+ symporter 4 399 7.5E-120 T 13-09-2016 PMA3_RS19420 31a17058e53aaa0d403d9768357a7af1 410 SUPERFAMILY SSF103473 8 399 1.83E-36 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS25215 a52e1a5ccbaac1cd9b0387451afaa042 483 PANTHER PTHR11895 1 480 5.0E-227 T 13-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS25215 a52e1a5ccbaac1cd9b0387451afaa042 483 Gene3D G3DSA:3.90.1300.10 2 480 1.1E-188 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS25215 a52e1a5ccbaac1cd9b0387451afaa042 483 PANTHER PTHR11895:SF7 1 480 5.0E-227 T 13-09-2016 PMA3_RS25215 a52e1a5ccbaac1cd9b0387451afaa042 483 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 474 4.2E-178 T 13-09-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS25215 a52e1a5ccbaac1cd9b0387451afaa042 483 ProSitePatterns PS00571 Amidases signature. 149 180 - T 13-09-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS25215 a52e1a5ccbaac1cd9b0387451afaa042 483 Pfam PF01425 Amidase 22 463 7.4E-161 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS25215 a52e1a5ccbaac1cd9b0387451afaa042 483 SUPERFAMILY SSF75304 2 480 1.15E-170 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS25215 a52e1a5ccbaac1cd9b0387451afaa042 483 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 474 93.488 T 13-09-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS14715 88cbdd6f061364ad92737150014288e4 452 Pfam PF00120 Glutamine synthetase, catalytic domain 115 446 9.2E-106 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS14715 88cbdd6f061364ad92737150014288e4 452 SUPERFAMILY SSF54368 6 113 1.2E-16 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS14715 88cbdd6f061364ad92737150014288e4 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 250 265 - T 13-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS14715 88cbdd6f061364ad92737150014288e4 452 SUPERFAMILY SSF55931 114 448 1.67E-104 T 13-09-2016 PMA3_RS14715 88cbdd6f061364ad92737150014288e4 452 Gene3D G3DSA:3.30.590.10 118 438 5.9E-91 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS14715 88cbdd6f061364ad92737150014288e4 452 PANTHER PTHR20852 5 452 2.0E-296 T 13-09-2016 PMA3_RS14715 88cbdd6f061364ad92737150014288e4 452 PANTHER PTHR20852:SF63 5 452 2.0E-296 T 13-09-2016 PMA3_RS14715 88cbdd6f061364ad92737150014288e4 452 SMART SM01230 114 370 5.2E-108 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS14715 88cbdd6f061364ad92737150014288e4 452 Gene3D G3DSA:3.10.20.70 6 117 9.4E-13 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 SUPERFAMILY SSF82714 187 270 3.27E-13 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 Pfam PF00873 AcrB/AcrD/AcrF family 9 1014 1.9E-297 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 Gene3D G3DSA:1.20.1640.10 289 504 6.6E-53 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 4.3E-65 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 4.3E-65 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 4.3E-65 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 4.3E-65 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 4.3E-65 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 4.3E-65 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 4.3E-65 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 4.3E-65 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PRINTS PR00702 Acriflavin resistance protein family signature 609 623 4.3E-65 T 13-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 SUPERFAMILY SSF82693 141 186 7.85E-21 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 SUPERFAMILY SSF82693 272 328 7.85E-21 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 Gene3D G3DSA:3.30.2090.10 187 269 2.1E-13 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 Gene3D G3DSA:3.30.2090.10 709 789 1.1E-19 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 Gene3D G3DSA:3.30.70.1430 45 146 5.6E-27 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 SUPERFAMILY SSF82866 793 1019 1.06E-43 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 SUPERFAMILY SSF82866 294 495 2.75E-44 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 SUPERFAMILY SSF82693 45 129 6.28E-21 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 Gene3D G3DSA:1.10.3850.10 799 1016 1.1E-54 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 SUPERFAMILY SSF82714 709 789 2.09E-16 T 13-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PANTHER PTHR32063 5 1020 0.0 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 Gene3D G3DSA:3.30.70.1430 558 644 2.1E-4 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 PANTHER PTHR32063:SF30 5 1020 0.0 T 13-09-2016 PMA3_RS04200 84463b1a498ab318e149ad97db327890 1033 SUPERFAMILY SSF82693 555 648 1.6E-10 T 13-09-2016 PMA3_RS21685 91c363e1ac85ab84f36a51c489c3423d 166 PANTHER PTHR35091:SF1 1 166 7.3E-58 T 13-09-2016 PMA3_RS21685 91c363e1ac85ab84f36a51c489c3423d 166 Pfam PF03748 Flagellar basal body-associated protein FliL 65 166 2.5E-22 T 13-09-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PMA3_RS21685 91c363e1ac85ab84f36a51c489c3423d 166 PANTHER PTHR35091 1 166 7.3E-58 T 13-09-2016 PMA3_RS26830 0a001d51f59ae5e4c848b87cf46c9a8d 1017 Pfam PF04851 Type III restriction enzyme, res subunit 67 267 5.6E-13 T 13-09-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PMA3_RS26830 0a001d51f59ae5e4c848b87cf46c9a8d 1017 SUPERFAMILY SSF52540 509 594 2.91E-8 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26830 0a001d51f59ae5e4c848b87cf46c9a8d 1017 SUPERFAMILY SSF52540 110 160 2.91E-8 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26830 0a001d51f59ae5e4c848b87cf46c9a8d 1017 Gene3D G3DSA:3.40.50.300 107 191 4.4E-10 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26830 0a001d51f59ae5e4c848b87cf46c9a8d 1017 SUPERFAMILY SSF52540 104 297 2.33E-11 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26830 0a001d51f59ae5e4c848b87cf46c9a8d 1017 SUPERFAMILY SSF52540 3 28 2.33E-11 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09085 0ca0661016c3a33596e4b127a75746b3 403 SUPERFAMILY SSF53383 38 401 4.71E-123 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS09085 0ca0661016c3a33596e4b127a75746b3 403 PANTHER PTHR11808 1 403 1.9E-228 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS09085 0ca0661016c3a33596e4b127a75746b3 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 211 225 - T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS09085 0ca0661016c3a33596e4b127a75746b3 403 Gene3D G3DSA:3.90.1150.10 268 402 4.5E-51 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS09085 0ca0661016c3a33596e4b127a75746b3 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 400 4.1E-143 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS09085 0ca0661016c3a33596e4b127a75746b3 403 PIRSF PIRSF001434 8 403 4.0E-135 T 13-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PMA3_RS09085 0ca0661016c3a33596e4b127a75746b3 403 PANTHER PTHR11808:SF36 1 403 1.9E-228 T 13-09-2016 PMA3_RS09085 0ca0661016c3a33596e4b127a75746b3 403 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 20 400 5.1E-190 T 13-09-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 PMA3_RS09085 0ca0661016c3a33596e4b127a75746b3 403 Gene3D G3DSA:3.40.640.10 19 266 2.6E-92 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS09475 da1afa6a4d97d1b76375f05692a424b7 315 Gene3D G3DSA:3.30.1780.10 17 150 1.6E-40 T 13-09-2016 IPR023401 Ornithine cyclodeaminase, N-terminal PMA3_RS09475 da1afa6a4d97d1b76375f05692a424b7 315 Gene3D G3DSA:3.40.50.720 151 296 8.4E-32 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09475 da1afa6a4d97d1b76375f05692a424b7 315 SUPERFAMILY SSF51735 16 312 1.84E-67 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09475 da1afa6a4d97d1b76375f05692a424b7 315 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 21 309 4.4E-32 T 13-09-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin PMA3_RS09475 da1afa6a4d97d1b76375f05692a424b7 315 PIRSF PIRSF001439 8 315 1.1E-55 T 13-09-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin PMA3_RS09475 da1afa6a4d97d1b76375f05692a424b7 315 PANTHER PTHR13812:SF19 1 309 3.5E-51 T 13-09-2016 PMA3_RS09475 da1afa6a4d97d1b76375f05692a424b7 315 PANTHER PTHR13812 1 309 3.5E-51 T 13-09-2016 PMA3_RS13625 716142032c437d1cd1407eb218d3c4a5 157 Gene3D G3DSA:3.10.20.30 3 74 2.7E-29 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS13625 716142032c437d1cd1407eb218d3c4a5 157 Pfam PF01799 [2Fe-2S] binding domain 84 149 4.2E-23 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS13625 716142032c437d1cd1407eb218d3c4a5 157 PANTHER PTHR11908:SF82 1 142 2.0E-25 T 13-09-2016 PMA3_RS13625 716142032c437d1cd1407eb218d3c4a5 157 SUPERFAMILY SSF47741 83 155 2.22E-25 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS13625 716142032c437d1cd1407eb218d3c4a5 157 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS13625 716142032c437d1cd1407eb218d3c4a5 157 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 61 8.2E-8 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS13625 716142032c437d1cd1407eb218d3c4a5 157 Gene3D G3DSA:1.10.150.120 85 155 1.4E-25 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS13625 716142032c437d1cd1407eb218d3c4a5 157 SUPERFAMILY SSF54292 4 75 1.26E-25 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS13625 716142032c437d1cd1407eb218d3c4a5 157 PANTHER PTHR11908 1 142 2.0E-25 T 13-09-2016 PMA3_RS11095 3a83de9f765e7325bf39dd082286c4b2 444 TIGRFAM TIGR03105 gln_synth_III: glutamine synthetase, type III 7 441 3.5E-198 T 13-09-2016 IPR017536 Glutamine synthetase, type III GO:0004356|GO:0006542 PMA3_RS11095 3a83de9f765e7325bf39dd082286c4b2 444 Gene3D G3DSA:3.10.20.70 4 101 1.1E-16 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS11095 3a83de9f765e7325bf39dd082286c4b2 444 PANTHER PTHR20852 7 444 5.1E-134 T 13-09-2016 PMA3_RS11095 3a83de9f765e7325bf39dd082286c4b2 444 PANTHER PTHR20852:SF7 7 444 5.1E-134 T 13-09-2016 PMA3_RS11095 3a83de9f765e7325bf39dd082286c4b2 444 SUPERFAMILY SSF55931 99 442 1.18E-108 T 13-09-2016 PMA3_RS11095 3a83de9f765e7325bf39dd082286c4b2 444 Pfam PF00120 Glutamine synthetase, catalytic domain 100 440 9.6E-109 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS11095 3a83de9f765e7325bf39dd082286c4b2 444 Gene3D G3DSA:3.30.590.10 102 432 8.8E-105 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS11095 3a83de9f765e7325bf39dd082286c4b2 444 SUPERFAMILY SSF54368 4 98 2.09E-19 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS11095 3a83de9f765e7325bf39dd082286c4b2 444 SMART SM01230 99 354 1.5E-108 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS15850 659cfb8fa86b483886881907c83e225f 432 PIRSF PIRSF002808 3 427 5.6E-34 T 13-09-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS15850 659cfb8fa86b483886881907c83e225f 432 PANTHER PTHR11662 6 411 2.0E-125 T 13-09-2016 PMA3_RS15850 659cfb8fa86b483886881907c83e225f 432 SUPERFAMILY SSF103473 7 417 3.53E-82 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS15850 659cfb8fa86b483886881907c83e225f 432 PANTHER PTHR11662:SF3 6 411 2.0E-125 T 13-09-2016 PMA3_RS15850 659cfb8fa86b483886881907c83e225f 432 Gene3D G3DSA:1.20.1250.20 225 410 4.3E-33 T 13-09-2016 PMA3_RS15850 659cfb8fa86b483886881907c83e225f 432 Pfam PF07690 Major Facilitator Superfamily 18 375 2.4E-55 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS15850 659cfb8fa86b483886881907c83e225f 432 Gene3D G3DSA:1.20.1250.20 11 205 3.3E-38 T 13-09-2016 PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 Gene3D G3DSA:1.20.120.530 89 221 4.4E-26 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 SMART SM00345 11 70 2.0E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 SUPERFAMILY SSF48008 89 220 1.2E-22 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 3.9E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 Gene3D G3DSA:1.10.10.10 9 70 2.2E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 SUPERFAMILY SSF46785 5 74 7.71E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 Pfam PF07729 FCD domain 92 215 9.6E-23 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 SMART SM00895 92 216 4.9E-17 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 PANTHER PTHR11751 11 108 1.0E-24 T 13-09-2016 PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.6E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS03080 df4de8659de5d5b53b86fcb0e1438ae3 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.6E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS22035 49d496dce0dbca415b6f1ad29343a309 316 TIGRFAM TIGR01230 agmatinase: agmatinase 35 308 1.3E-65 T 13-09-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 PMA3_RS22035 49d496dce0dbca415b6f1ad29343a309 316 PRINTS PR00116 Arginase signature 122 137 3.3E-13 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS22035 49d496dce0dbca415b6f1ad29343a309 316 PRINTS PR00116 Arginase signature 235 264 3.3E-13 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS22035 49d496dce0dbca415b6f1ad29343a309 316 PANTHER PTHR11358:SF27 1 313 8.7E-207 T 13-09-2016 PMA3_RS22035 49d496dce0dbca415b6f1ad29343a309 316 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 13-09-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 PMA3_RS22035 49d496dce0dbca415b6f1ad29343a309 316 Gene3D G3DSA:3.40.800.10 8 310 2.4E-128 T 13-09-2016 IPR023696 Ureohydrolase domain PMA3_RS22035 49d496dce0dbca415b6f1ad29343a309 316 PIRSF PIRSF036979 15 313 8.8E-104 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS22035 49d496dce0dbca415b6f1ad29343a309 316 PANTHER PTHR11358 1 313 8.7E-207 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS22035 49d496dce0dbca415b6f1ad29343a309 316 Pfam PF00491 Arginase family 36 307 7.8E-91 T 13-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PMA3_RS22035 49d496dce0dbca415b6f1ad29343a309 316 SUPERFAMILY SSF52768 14 309 9.18E-103 T 13-09-2016 PMA3_RS28875 23c43c23e72d94749f39252133bb7266 380 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS28875 23c43c23e72d94749f39252133bb7266 380 SUPERFAMILY SSF50331 255 378 8.5E-17 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS28875 23c43c23e72d94749f39252133bb7266 380 PANTHER PTHR24220:SF481 24 327 8.3E-190 T 13-09-2016 PMA3_RS28875 23c43c23e72d94749f39252133bb7266 380 SUPERFAMILY SSF52540 22 263 1.56E-86 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28875 23c43c23e72d94749f39252133bb7266 380 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 53 378 1.1E-127 T 13-09-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PMA3_RS28875 23c43c23e72d94749f39252133bb7266 380 SMART SM00382 47 235 3.9E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS28875 23c43c23e72d94749f39252133bb7266 380 Pfam PF00005 ABC transporter 39 180 6.6E-38 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS28875 23c43c23e72d94749f39252133bb7266 380 Gene3D G3DSA:3.40.50.300 16 256 9.3E-81 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28875 23c43c23e72d94749f39252133bb7266 380 Pfam PF08402 TOBE domain 300 378 7.8E-17 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS28875 23c43c23e72d94749f39252133bb7266 380 PANTHER PTHR24220 24 327 8.3E-190 T 13-09-2016 PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 SUPERFAMILY SSF46906 68 141 4.45E-23 T 13-09-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 8.2E-28 T 13-09-2016 IPR020784 Ribosomal protein L11, N-terminal PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.0E-64 T 13-09-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 29.801 T 13-09-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 6.3E-22 T 13-09-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 SUPERFAMILY SSF54747 3 72 2.88E-29 T 13-09-2016 IPR020784 Ribosomal protein L11, N-terminal PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 13-09-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 Gene3D G3DSA:3.30.1550.10 2 72 3.3E-37 T 13-09-2016 IPR020784 Ribosomal protein L11, N-terminal PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 SMART SM00649 9 141 6.3E-82 T 13-09-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 Gene3D G3DSA:1.10.10.250 73 141 5.4E-29 T 13-09-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 4.0E-16 T 13-09-2016 PMA3_RS27320 1057066917f8f0fd9f6aa4c67dd06af6 143 PANTHER PTHR11661 1 142 5.1E-69 T 13-09-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PMA3_RS21805 e44455ecb4b1d05f796b565275939fed 231 Pfam PF02107 Flagellar L-ring protein 44 228 1.2E-59 T 13-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PMA3_RS21805 e44455ecb4b1d05f796b565275939fed 231 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 228 30.36 T 13-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PMA3_RS21805 e44455ecb4b1d05f796b565275939fed 231 PANTHER PTHR34933 1 231 8.8E-109 T 13-09-2016 PMA3_RS21805 e44455ecb4b1d05f796b565275939fed 231 PRINTS PR01008 Flagellar L-ring protein signature 170 186 5.6E-25 T 13-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PMA3_RS21805 e44455ecb4b1d05f796b565275939fed 231 PRINTS PR01008 Flagellar L-ring protein signature 144 159 5.6E-25 T 13-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PMA3_RS21805 e44455ecb4b1d05f796b565275939fed 231 PRINTS PR01008 Flagellar L-ring protein signature 207 221 5.6E-25 T 13-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PMA3_RS21805 e44455ecb4b1d05f796b565275939fed 231 PRINTS PR01008 Flagellar L-ring protein signature 191 205 5.6E-25 T 13-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PMA3_RS21805 e44455ecb4b1d05f796b565275939fed 231 PRINTS PR01008 Flagellar L-ring protein signature 66 78 5.6E-25 T 13-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PMA3_RS21805 e44455ecb4b1d05f796b565275939fed 231 PANTHER PTHR34933:SF2 1 231 8.8E-109 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 PANTHER PTHR24423:SF382 7 17 6.5E-165 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Pfam PF08448 PAS fold 589 699 3.6E-11 T 13-09-2016 IPR013656 PAS fold-4 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SMART SM00062 306 528 2.8E-29 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SMART SM00062 60 282 8.9E-25 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Gene3D G3DSA:3.40.190.10 407 469 6.0E-8 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 PANTHER PTHR24423 566 1093 6.5E-165 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 PANTHER PTHR24423 7 17 6.5E-165 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 PANTHER PTHR24423:SF382 566 1093 6.5E-165 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 PRINTS PR00344 Bacterial sensor protein C-terminal signature 873 887 2.6E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 PRINTS PR00344 Bacterial sensor protein C-terminal signature 891 901 2.6E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 PRINTS PR00344 Bacterial sensor protein C-terminal signature 908 926 2.6E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 PRINTS PR00344 Bacterial sensor protein C-terminal signature 932 945 2.6E-13 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SUPERFAMILY SSF53850 300 529 6.79E-38 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SUPERFAMILY SSF52172 967 1089 6.4E-34 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SMART SM00387 831 948 1.7E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 307 525 1.2E-30 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 63 278 6.3E-25 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Gene3D G3DSA:3.40.50.2300 967 1077 6.2E-35 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Pfam PF00072 Response regulator receiver domain 971 1084 1.8E-24 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SUPERFAMILY SSF47226 1068 1175 1.96E-17 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SMART SM00091 582 647 8.0E-4 T 13-09-2016 IPR000014 PAS domain PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SUPERFAMILY SSF53850 53 278 1.09E-32 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SUPERFAMILY SSF55874 773 944 1.02E-41 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Gene3D G3DSA:3.40.190.10 175 233 7.0E-4 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Gene3D G3DSA:1.20.120.160 1078 1207 4.1E-13 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 832 946 1.3E-23 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Gene3D G3DSA:3.30.565.10 784 947 9.1E-43 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Gene3D G3DSA:3.30.450.20 568 695 1.0E-13 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SUPERFAMILY SSF47384 700 784 1.96E-19 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Gene3D G3DSA:3.40.190.10 242 279 3.1E-14 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Gene3D G3DSA:3.40.190.10 58 148 3.1E-14 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Gene3D G3DSA:3.40.190.10 308 406 9.0E-20 T 13-09-2016 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 582 700 3.4E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Pfam PF00512 His Kinase A (phospho-acceptor) domain 717 783 3.8E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Pfam PF01627 Hpt domain 1116 1202 5.6E-8 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SMART SM00388 717 783 1.3E-18 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SMART SM00448 969 1085 6.0E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 Gene3D G3DSA:1.10.287.130 709 779 6.5E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS07110 816654fc470c185f66fc55c48263782e 1215 SUPERFAMILY SSF55785 567 695 9.77E-16 T 13-09-2016 IPR000014 PAS domain PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 Gene3D G3DSA:3.30.360.10 163 314 3.5E-70 T 13-09-2016 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 SUPERFAMILY SSF55347 154 313 2.92E-66 T 13-09-2016 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 312 5.4E-61 T 13-09-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 154 1.3E-58 T 13-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 PANTHER PTHR10836:SF50 1 324 7.2E-194 T 13-09-2016 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.3E-36 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 2.3E-36 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 2.3E-36 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 2.3E-36 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 2.3E-36 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 SMART SM00846 3 154 2.7E-91 T 13-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 Gene3D G3DSA:3.40.50.720 1 162 2.4E-73 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 PANTHER PTHR10836 1 324 7.2E-194 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 PIRSF PIRSF000149 1 333 1.3E-133 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.4E-130 T 13-09-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 13-09-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS23125 0ba135695873990bf4ad321451dd786f 333 SUPERFAMILY SSF51735 1 177 2.8E-62 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13845 a24c842cfcbda03a0943eaa25894a2af 384 Pfam PF00155 Aminotransferase class I and II 33 374 2.1E-31 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS13845 a24c842cfcbda03a0943eaa25894a2af 384 Gene3D G3DSA:3.40.640.10 39 246 1.0E-49 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS13845 a24c842cfcbda03a0943eaa25894a2af 384 PANTHER PTHR11751:SF422 4 382 2.4E-108 T 13-09-2016 PMA3_RS13845 a24c842cfcbda03a0943eaa25894a2af 384 PANTHER PTHR11751 4 382 2.4E-108 T 13-09-2016 PMA3_RS13845 a24c842cfcbda03a0943eaa25894a2af 384 SUPERFAMILY SSF53383 1 380 2.78E-86 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS13845 a24c842cfcbda03a0943eaa25894a2af 384 Gene3D G3DSA:3.90.1150.10 247 380 1.8E-38 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS13845 a24c842cfcbda03a0943eaa25894a2af 384 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 379 6.9E-124 T 13-09-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 PMA3_RS28420 668f33a143fdc4bc15c534d8153c578e 134 Gene3D G3DSA:3.40.50.2300 5 125 6.8E-36 T 13-09-2016 PMA3_RS28420 668f33a143fdc4bc15c534d8153c578e 134 PANTHER PTHR26402:SF568 8 125 4.5E-90 T 13-09-2016 PMA3_RS28420 668f33a143fdc4bc15c534d8153c578e 134 SMART SM00448 8 121 3.9E-37 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS28420 668f33a143fdc4bc15c534d8153c578e 134 SUPERFAMILY SSF52172 8 126 1.1E-35 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS28420 668f33a143fdc4bc15c534d8153c578e 134 Pfam PF00072 Response regulator receiver domain 10 122 2.2E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS28420 668f33a143fdc4bc15c534d8153c578e 134 PANTHER PTHR26402 8 125 4.5E-90 T 13-09-2016 PMA3_RS07890 bf018662d3eb6d9ba64e1b7e7519a961 363 TIGRFAM TIGR00033 aroC: chorismate synthase 10 349 8.7E-138 T 13-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS07890 bf018662d3eb6d9ba64e1b7e7519a961 363 Pfam PF01264 Chorismate synthase 10 344 1.1E-137 T 13-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS07890 bf018662d3eb6d9ba64e1b7e7519a961 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 13-09-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS07890 bf018662d3eb6d9ba64e1b7e7519a961 363 PANTHER PTHR21085 2 350 1.1E-206 T 13-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS07890 bf018662d3eb6d9ba64e1b7e7519a961 363 PIRSF PIRSF001456 3 359 6.1E-136 T 13-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS07890 bf018662d3eb6d9ba64e1b7e7519a961 363 SUPERFAMILY SSF103263 4 354 6.41E-146 T 13-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS07890 bf018662d3eb6d9ba64e1b7e7519a961 363 Hamap MF_00300 Chorismate synthase [aroC]. 10 351 36.443 T 13-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS07890 bf018662d3eb6d9ba64e1b7e7519a961 363 Gene3D G3DSA:3.60.150.10 9 352 1.3E-154 T 13-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS07890 bf018662d3eb6d9ba64e1b7e7519a961 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 318 334 - T 13-09-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS07890 bf018662d3eb6d9ba64e1b7e7519a961 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 13-09-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS03680 6d55ead8548190d5fba8010b91cae1fa 214 Gene3D G3DSA:3.40.1050.10 1 204 1.4E-76 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS03680 6d55ead8548190d5fba8010b91cae1fa 214 PANTHER PTHR11002 1 208 2.1E-130 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS03680 6d55ead8548190d5fba8010b91cae1fa 214 PANTHER PTHR11002:SF20 1 208 2.1E-130 T 13-09-2016 PMA3_RS03680 6d55ead8548190d5fba8010b91cae1fa 214 SUPERFAMILY SSF53056 1 205 4.71E-74 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS03680 6d55ead8548190d5fba8010b91cae1fa 214 Pfam PF00484 Carbonic anhydrase 37 188 1.6E-50 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS03680 6d55ead8548190d5fba8010b91cae1fa 214 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 13-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS03680 6d55ead8548190d5fba8010b91cae1fa 214 SMART SM00947 30 193 1.4E-66 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS26950 0f3fc61646f5b8a23924b0bd27781a70 363 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 9.7E-83 T 13-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26950 0f3fc61646f5b8a23924b0bd27781a70 363 PIRSF PIRSF001259 2 363 3.5E-117 T 13-09-2016 PMA3_RS26950 0f3fc61646f5b8a23924b0bd27781a70 363 SUPERFAMILY SSF142695 204 361 2.48E-40 T 13-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PMA3_RS26950 0f3fc61646f5b8a23924b0bd27781a70 363 SUPERFAMILY SSF55821 3 203 2.98E-85 T 13-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PMA3_RS26950 0f3fc61646f5b8a23924b0bd27781a70 363 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.971 T 13-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26950 0f3fc61646f5b8a23924b0bd27781a70 363 Gene3D G3DSA:3.90.870.10 2 211 2.9E-98 T 13-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PMA3_RS26950 0f3fc61646f5b8a23924b0bd27781a70 363 PANTHER PTHR21327:SF6 1 361 2.0E-146 T 13-09-2016 PMA3_RS26950 0f3fc61646f5b8a23924b0bd27781a70 363 PANTHER PTHR21327 1 361 2.0E-146 T 13-09-2016 PMA3_RS26950 0f3fc61646f5b8a23924b0bd27781a70 363 Pfam PF00925 GTP cyclohydrolase II 208 361 1.6E-29 T 13-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PMA3_RS26950 0f3fc61646f5b8a23924b0bd27781a70 363 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 2.9E-73 T 13-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS02565 fe6fbbada57c98ae8686e5d800b4e90b 154 SUPERFAMILY SSF51230 80 153 1.83E-24 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS02565 fe6fbbada57c98ae8686e5d800b4e90b 154 Pfam PF00364 Biotin-requiring enzyme 82 153 9.1E-26 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS02565 fe6fbbada57c98ae8686e5d800b4e90b 154 PANTHER PTHR23151 1 154 8.1E-49 T 13-09-2016 PMA3_RS02565 fe6fbbada57c98ae8686e5d800b4e90b 154 Gene3D G3DSA:2.40.50.100 79 153 1.2E-31 T 13-09-2016 PMA3_RS02565 fe6fbbada57c98ae8686e5d800b4e90b 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 13-09-2016 IPR001882 Biotin-binding site PMA3_RS02565 fe6fbbada57c98ae8686e5d800b4e90b 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.6E-17 T 13-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PMA3_RS02565 fe6fbbada57c98ae8686e5d800b4e90b 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.6E-17 T 13-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PMA3_RS02565 fe6fbbada57c98ae8686e5d800b4e90b 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.6E-17 T 13-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PMA3_RS02565 fe6fbbada57c98ae8686e5d800b4e90b 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 8.0E-58 T 13-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PMA3_RS22790 4ad9e7821a4451d1147204e608003d82 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 13-09-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PMA3_RS22790 4ad9e7821a4451d1147204e608003d82 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 13-09-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PMA3_RS22790 4ad9e7821a4451d1147204e608003d82 382 SUPERFAMILY SSF56796 4 381 1.02E-130 T 13-09-2016 PMA3_RS22790 4ad9e7821a4451d1147204e608003d82 382 PANTHER PTHR11496:SF78 3 382 7.3E-212 T 13-09-2016 PMA3_RS22790 4ad9e7821a4451d1147204e608003d82 382 PANTHER PTHR11496 3 382 7.3E-212 T 13-09-2016 PMA3_RS22790 4ad9e7821a4451d1147204e608003d82 382 Gene3D G3DSA:1.20.1090.10 184 382 5.7E-76 T 13-09-2016 PMA3_RS22790 4ad9e7821a4451d1147204e608003d82 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 373 1.8E-122 T 13-09-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PMA3_RS22790 4ad9e7821a4451d1147204e608003d82 382 Gene3D G3DSA:3.40.50.1970 2 183 6.1E-58 T 13-09-2016 PMA3_RS12415 c079921fd9149822793645735487b357 357 PANTHER PTHR21225 23 357 1.4E-195 T 13-09-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS12415 c079921fd9149822793645735487b357 357 Gene3D G3DSA:3.20.20.70 23 356 2.5E-134 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS12415 c079921fd9149822793645735487b357 357 PIRSF PIRSF001361 14 357 2.2E-145 T 13-09-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS12415 c079921fd9149822793645735487b357 357 PANTHER PTHR21225:SF5 23 357 1.4E-195 T 13-09-2016 PMA3_RS12415 c079921fd9149822793645735487b357 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 24 355 5.1E-132 T 13-09-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS12415 c079921fd9149822793645735487b357 357 Pfam PF00793 DAHP synthetase I family 52 345 4.6E-82 T 13-09-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PMA3_RS12415 c079921fd9149822793645735487b357 357 SUPERFAMILY SSF51569 22 349 2.09E-122 T 13-09-2016 PMA3_RS12600 fbde7d5aab718292ce6bf1e78dca6981 221 SUPERFAMILY SSF46689 8 90 3.28E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12600 fbde7d5aab718292ce6bf1e78dca6981 221 Gene3D G3DSA:1.10.10.60 57 70 5.0E-5 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12600 fbde7d5aab718292ce6bf1e78dca6981 221 Gene3D G3DSA:1.10.357.10 71 210 7.8E-29 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS12600 fbde7d5aab718292ce6bf1e78dca6981 221 Gene3D G3DSA:1.10.10.60 8 56 2.4E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12600 fbde7d5aab718292ce6bf1e78dca6981 221 PANTHER PTHR30328 8 207 2.9E-42 T 13-09-2016 PMA3_RS12600 fbde7d5aab718292ce6bf1e78dca6981 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.2E-6 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS12600 fbde7d5aab718292ce6bf1e78dca6981 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.2E-6 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS12600 fbde7d5aab718292ce6bf1e78dca6981 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 1.6E-11 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS12600 fbde7d5aab718292ce6bf1e78dca6981 221 SUPERFAMILY SSF48498 86 210 6.5E-33 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS12600 fbde7d5aab718292ce6bf1e78dca6981 221 PANTHER PTHR30328:SF16 8 207 2.9E-42 T 13-09-2016 PMA3_RS16880 993aed3552c99a196e7ad16f87ac1972 314 Gene3D G3DSA:3.20.20.100 43 308 5.9E-46 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS16880 993aed3552c99a196e7ad16f87ac1972 314 Pfam PF00248 Aldo/keto reductase family 58 295 1.5E-29 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS16880 993aed3552c99a196e7ad16f87ac1972 314 SUPERFAMILY SSF51430 43 307 1.7E-52 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS16880 993aed3552c99a196e7ad16f87ac1972 314 PANTHER PTHR11732 43 295 5.8E-43 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS22160 f4d9561b4e0d0b527db2d212528d40e5 610 Gene3D G3DSA:3.40.50.300 362 597 1.1E-78 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22160 f4d9561b4e0d0b527db2d212528d40e5 610 PANTHER PTHR24221:SF203 3 610 0.0 T 13-09-2016 PMA3_RS22160 f4d9561b4e0d0b527db2d212528d40e5 610 Gene3D G3DSA:1.20.1560.10 32 334 2.4E-31 T 13-09-2016 PMA3_RS22160 f4d9561b4e0d0b527db2d212528d40e5 610 SMART SM00382 387 578 3.0E-22 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS22160 f4d9561b4e0d0b527db2d212528d40e5 610 Pfam PF00005 ABC transporter 380 532 6.5E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS22160 f4d9561b4e0d0b527db2d212528d40e5 610 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS22160 f4d9561b4e0d0b527db2d212528d40e5 610 PANTHER PTHR24221 3 610 0.0 T 13-09-2016 PMA3_RS22160 f4d9561b4e0d0b527db2d212528d40e5 610 SUPERFAMILY SSF52540 352 602 5.85E-87 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22160 f4d9561b4e0d0b527db2d212528d40e5 610 SUPERFAMILY SSF90123 31 343 4.71E-48 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS22160 f4d9561b4e0d0b527db2d212528d40e5 610 Pfam PF00664 ABC transporter transmembrane region 42 298 3.8E-14 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS17935 a31dc094aad986bd1654ec1c9b8970ec 350 PANTHER PTHR30006:SF7 10 350 1.5E-89 T 13-09-2016 PMA3_RS17935 a31dc094aad986bd1654ec1c9b8970ec 350 PANTHER PTHR30006 10 350 1.5E-89 T 13-09-2016 PMA3_RS17935 a31dc094aad986bd1654ec1c9b8970ec 350 Gene3D G3DSA:3.40.190.10 133 275 9.8E-31 T 13-09-2016 PMA3_RS17935 a31dc094aad986bd1654ec1c9b8970ec 350 Gene3D G3DSA:3.40.190.10 14 130 1.5E-21 T 13-09-2016 PMA3_RS17935 a31dc094aad986bd1654ec1c9b8970ec 350 Gene3D G3DSA:3.40.190.10 276 341 1.5E-21 T 13-09-2016 PMA3_RS17935 a31dc094aad986bd1654ec1c9b8970ec 350 Pfam PF13416 Bacterial extracellular solute-binding protein 50 313 1.1E-31 T 13-09-2016 PMA3_RS17935 a31dc094aad986bd1654ec1c9b8970ec 350 SUPERFAMILY SSF53850 30 346 4.78E-61 T 13-09-2016 PMA3_RS18475 151ce7d2fc61e7ae67be3ae30154c50e 549 PANTHER PTHR24096 1 539 4.9E-236 T 13-09-2016 PMA3_RS18475 151ce7d2fc61e7ae67be3ae30154c50e 549 Gene3D G3DSA:3.40.50.980 46 190 1.3E-29 T 13-09-2016 PMA3_RS18475 151ce7d2fc61e7ae67be3ae30154c50e 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 529 7.9E-13 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS18475 151ce7d2fc61e7ae67be3ae30154c50e 549 Gene3D G3DSA:3.40.50.980 191 342 5.7E-36 T 13-09-2016 PMA3_RS18475 151ce7d2fc61e7ae67be3ae30154c50e 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS18475 151ce7d2fc61e7ae67be3ae30154c50e 549 Pfam PF00501 AMP-binding enzyme 17 445 5.9E-89 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS18475 151ce7d2fc61e7ae67be3ae30154c50e 549 Gene3D G3DSA:2.30.38.10 360 439 1.0E-14 T 13-09-2016 PMA3_RS18475 151ce7d2fc61e7ae67be3ae30154c50e 549 PANTHER PTHR24096:SF53 1 539 4.9E-236 T 13-09-2016 PMA3_RS18475 151ce7d2fc61e7ae67be3ae30154c50e 549 Gene3D G3DSA:3.30.300.30 440 538 6.8E-24 T 13-09-2016 PMA3_RS18475 151ce7d2fc61e7ae67be3ae30154c50e 549 SUPERFAMILY SSF56801 10 541 2.62E-126 T 13-09-2016 PMA3_RS04295 100e6e020d844d5767287c127c14b091 438 Gene3D G3DSA:1.20.1250.20 39 231 4.6E-17 T 13-09-2016 PMA3_RS04295 100e6e020d844d5767287c127c14b091 438 Gene3D G3DSA:1.20.1250.20 244 421 1.8E-15 T 13-09-2016 PMA3_RS04295 100e6e020d844d5767287c127c14b091 438 PANTHER PTHR23523 34 438 7.5E-160 T 13-09-2016 PMA3_RS04295 100e6e020d844d5767287c127c14b091 438 SUPERFAMILY SSF103473 38 425 2.22E-49 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS04295 100e6e020d844d5767287c127c14b091 438 PANTHER PTHR23523:SF2 34 438 7.5E-160 T 13-09-2016 PMA3_RS04295 100e6e020d844d5767287c127c14b091 438 Pfam PF07690 Major Facilitator Superfamily 72 387 6.3E-20 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS04295 100e6e020d844d5767287c127c14b091 438 TIGRFAM TIGR00896 CynX: cyanate transporter 55 405 2.2E-143 T 13-09-2016 IPR004747 Cyanate transport system protein GO:0016021 PMA3_RS04075 5f196bcee83126d162dab564af8aa890 197 SUPERFAMILY SSF53697 2 193 7.89E-58 T 13-09-2016 PMA3_RS04075 5f196bcee83126d162dab564af8aa890 197 Gene3D G3DSA:3.40.50.10490 2 194 4.3E-62 T 13-09-2016 PMA3_RS04075 5f196bcee83126d162dab564af8aa890 197 PANTHER PTHR30390:SF5 3 197 3.2E-121 T 13-09-2016 PMA3_RS04075 5f196bcee83126d162dab564af8aa890 197 Pfam PF13580 SIS domain 14 146 1.0E-36 T 13-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PMA3_RS04075 5f196bcee83126d162dab564af8aa890 197 PANTHER PTHR30390 3 197 3.2E-121 T 13-09-2016 PMA3_RS04075 5f196bcee83126d162dab564af8aa890 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 37.402 T 13-09-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 PMA3_RS20250 e11fcab51eb30908a1d0a9dc98c6d946 107 SUPERFAMILY SSF69131 29 107 3.27E-40 T 13-09-2016 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 PMA3_RS20250 e11fcab51eb30908a1d0a9dc98c6d946 107 ProDom PD591508 QUINOHEMOPROTEIN AMINE SUBUNIT DEHYDROGENASE GAMMA 1.4.99.- CATALYTIC QH-AMDH CTQ 3D-STRUCTURE 38 107 4.0E-37 T 13-09-2016 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 PMA3_RS20250 e11fcab51eb30908a1d0a9dc98c6d946 107 Pfam PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit 31 105 1.7E-42 T 13-09-2016 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 PMA3_RS20250 e11fcab51eb30908a1d0a9dc98c6d946 107 Gene3D G3DSA:4.10.940.10 29 107 1.3E-46 T 13-09-2016 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 PMA3_RS02480 835878c3c4bbb39d42ea9c62dc454109 365 SUPERFAMILY SSF111342 6 289 1.31E-80 T 13-09-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PMA3_RS02480 835878c3c4bbb39d42ea9c62dc454109 365 Pfam PF01888 CbiD 12 271 1.0E-86 T 13-09-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PMA3_RS02480 835878c3c4bbb39d42ea9c62dc454109 365 PANTHER PTHR35863:SF1 1 365 3.9E-117 T 13-09-2016 PMA3_RS02480 835878c3c4bbb39d42ea9c62dc454109 365 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 361 27.581 T 13-09-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PMA3_RS02480 835878c3c4bbb39d42ea9c62dc454109 365 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 19 318 9.1E-60 T 13-09-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PMA3_RS02480 835878c3c4bbb39d42ea9c62dc454109 365 Gene3D G3DSA:3.30.2110.10 14 186 1.0E-54 T 13-09-2016 PMA3_RS02480 835878c3c4bbb39d42ea9c62dc454109 365 PIRSF PIRSF026782 9 365 1.5E-118 T 13-09-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PMA3_RS02480 835878c3c4bbb39d42ea9c62dc454109 365 PANTHER PTHR35863 1 365 3.9E-117 T 13-09-2016 PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 Pfam PF06441 Epoxide hydrolase N terminus 31 136 2.4E-36 T 13-09-2016 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9 PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 PANTHER PTHR21661:SF35 21 423 2.8E-118 T 13-09-2016 PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 Gene3D G3DSA:3.40.50.1820 22 422 1.0E-133 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 PANTHER PTHR21661 21 423 2.8E-118 T 13-09-2016 PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 SUPERFAMILY SSF53474 23 421 2.56E-96 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 PRINTS PR00412 Epoxide hydrolase signature 127 145 5.2E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 PRINTS PR00412 Epoxide hydrolase signature 364 380 5.2E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 PRINTS PR00412 Epoxide hydrolase signature 396 418 5.2E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 PRINTS PR00412 Epoxide hydrolase signature 156 171 5.2E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 PRINTS PR00412 Epoxide hydrolase signature 201 214 5.2E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS16765 d43e0b9e14df6dd0a564b5ec62311629 423 PIRSF PIRSF001112 8 423 8.9E-146 T 13-09-2016 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9 PMA3_RS09560 4c6cac657c2b46e54470cac2ece2bb66 514 SUPERFAMILY SSF53850 28 508 7.06E-113 T 13-09-2016 PMA3_RS09560 4c6cac657c2b46e54470cac2ece2bb66 514 PANTHER PTHR30290 1 499 1.0E-107 T 13-09-2016 PMA3_RS09560 4c6cac657c2b46e54470cac2ece2bb66 514 Gene3D G3DSA:3.10.105.10 290 479 8.7E-39 T 13-09-2016 PMA3_RS09560 4c6cac657c2b46e54470cac2ece2bb66 514 Gene3D G3DSA:3.90.76.10 43 188 4.6E-36 T 13-09-2016 PMA3_RS09560 4c6cac657c2b46e54470cac2ece2bb66 514 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 13-09-2016 IPR023765 Solute-binding protein family 5, conserved site PMA3_RS09560 4c6cac657c2b46e54470cac2ece2bb66 514 Gene3D G3DSA:3.40.190.10 189 289 4.2E-30 T 13-09-2016 PMA3_RS09560 4c6cac657c2b46e54470cac2ece2bb66 514 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 420 1.2E-79 T 13-09-2016 IPR000914 Solute-binding protein family 5 domain PMA3_RS09560 4c6cac657c2b46e54470cac2ece2bb66 514 PIRSF PIRSF002741 25 513 8.9E-81 T 13-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PMA3_RS23570 c726c9ba33c8661d326032e3a736958f 304 SUPERFAMILY SSF90257 114 216 7.59E-5 T 13-09-2016 PMA3_RS00155 a50f20c3cabb94a05ae94d081b04602d 181 Gene3D G3DSA:2.160.10.10 4 173 5.5E-45 T 13-09-2016 PMA3_RS00155 a50f20c3cabb94a05ae94d081b04602d 181 SUPERFAMILY SSF51161 4 173 4.71E-45 T 13-09-2016 IPR011004 Trimeric LpxA-like PMA3_RS00155 a50f20c3cabb94a05ae94d081b04602d 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 128 6.0E-8 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS00155 a50f20c3cabb94a05ae94d081b04602d 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 45 2.1E-5 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS00155 a50f20c3cabb94a05ae94d081b04602d 181 PANTHER PTHR13061 6 176 4.7E-76 T 13-09-2016 PMA3_RS25865 df3e234576d55e35aff6bc0da5b15ee2 123 Gene3D G3DSA:1.10.1660.10 55 119 9.9E-10 T 13-09-2016 PMA3_RS25865 df3e234576d55e35aff6bc0da5b15ee2 123 SMART SM00422 1 69 1.4E-20 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS25865 df3e234576d55e35aff6bc0da5b15ee2 123 Gene3D G3DSA:1.10.1660.10 1 54 6.8E-21 T 13-09-2016 PMA3_RS25865 df3e234576d55e35aff6bc0da5b15ee2 123 SUPERFAMILY SSF46955 1 108 1.5E-24 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS25865 df3e234576d55e35aff6bc0da5b15ee2 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.3E-10 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS25865 df3e234576d55e35aff6bc0da5b15ee2 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.3E-10 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS25865 df3e234576d55e35aff6bc0da5b15ee2 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 7.3E-10 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS25865 df3e234576d55e35aff6bc0da5b15ee2 123 PANTHER PTHR30204 1 98 8.8E-19 T 13-09-2016 PMA3_RS25865 df3e234576d55e35aff6bc0da5b15ee2 123 Pfam PF13411 MerR HTH family regulatory protein 2 67 2.7E-13 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS16875 5dd60649a4cc2c3256545398edac6db2 152 PANTHER PTHR33164:SF5 13 113 7.9E-49 T 13-09-2016 PMA3_RS16875 5dd60649a4cc2c3256545398edac6db2 152 SMART SM00347 35 131 2.3E-21 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS16875 5dd60649a4cc2c3256545398edac6db2 152 Pfam PF01047 MarR family 42 100 4.4E-15 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS16875 5dd60649a4cc2c3256545398edac6db2 152 SUPERFAMILY SSF46785 9 147 5.01E-30 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16875 5dd60649a4cc2c3256545398edac6db2 152 Gene3D G3DSA:1.10.10.10 5 147 1.9E-38 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16875 5dd60649a4cc2c3256545398edac6db2 152 PANTHER PTHR33164 13 113 7.9E-49 T 13-09-2016 PMA3_RS16875 5dd60649a4cc2c3256545398edac6db2 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 6.9E-7 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS16875 5dd60649a4cc2c3256545398edac6db2 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 6.9E-7 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS16875 5dd60649a4cc2c3256545398edac6db2 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 6.9E-7 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 PANTHER PTHR11482 8 398 1.7E-70 T 13-09-2016 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 285 392 2.8E-12 T 13-09-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 PANTHER PTHR11482:SF5 8 398 1.7E-70 T 13-09-2016 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 SUPERFAMILY SSF50621 266 397 3.56E-33 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 72 84 3.9E-9 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 52 70 3.9E-9 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 184 197 3.9E-9 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 3.9E-9 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 222 238 - T 13-09-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 Gene3D G3DSA:3.20.20.10 31 268 4.0E-60 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 SUPERFAMILY SSF51419 29 282 4.65E-57 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 Gene3D G3DSA:2.40.37.10 269 396 3.7E-30 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS09135 88f50a9fd36de68f29c16fa3a981e545 403 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 37 279 7.9E-31 T 13-09-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 43 171 3.2E-43 T 13-09-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 324 594 1.5E-106 T 13-09-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 SUPERFAMILY SSF143243 18 224 1.57E-59 T 13-09-2016 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 206 594 42.209 T 13-09-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 247 258 - T 13-09-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 100 155 5.0E-25 T 13-09-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 23 180 25.749 T 13-09-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 PANTHER PTHR11993 142 589 1.3E-298 T 13-09-2016 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 10 594 70.391 T 13-09-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 210 594 4.0E-171 T 13-09-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 PANTHER PTHR11993:SF28 142 589 1.3E-298 T 13-09-2016 PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 SUPERFAMILY SSF56762 220 594 1.44E-122 T 13-09-2016 IPR029014 NiFe hydrogenase-like PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 Gene3D G3DSA:1.10.645.10 211 578 1.8E-48 T 13-09-2016 IPR029014 NiFe hydrogenase-like PMA3_RS19680 7d380b325495ab22ec6e0069949de4d6 594 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 44 173 5.2E-42 T 13-09-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 PANTHER PTHR10937:SF0 1 610 0.0 T 13-09-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 PANTHER PTHR10937 1 610 0.0 T 13-09-2016 PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 SUPERFAMILY SSF53697 245 610 1.67E-117 T 13-09-2016 PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 41.022 T 13-09-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 Pfam PF01380 SIS domain 290 417 2.0E-31 T 13-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 Pfam PF01380 SIS domain 463 592 1.5E-26 T 13-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 Gene3D G3DSA:3.40.50.10490 244 443 1.8E-77 T 13-09-2016 PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 SUPERFAMILY SSF56235 2 234 8.58E-75 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 5.1E-260 T 13-09-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 Pfam PF13522 Glutamine amidotransferase domain 66 182 2.1E-21 T 13-09-2016 PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 Gene3D G3DSA:3.60.20.10 2 235 4.2E-80 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS29985 fb17222839f61f03e489e1d4397fbbdc 610 Gene3D G3DSA:3.40.50.10490 444 610 1.9E-67 T 13-09-2016 PMA3_RS16595 0d3edb146e276f3cfd6fb27b94ee2e9b 296 PANTHER PTHR30118:SF5 1 294 1.6E-96 T 13-09-2016 PMA3_RS16595 0d3edb146e276f3cfd6fb27b94ee2e9b 296 SUPERFAMILY SSF46785 2 83 7.07E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16595 0d3edb146e276f3cfd6fb27b94ee2e9b 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.7E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16595 0d3edb146e276f3cfd6fb27b94ee2e9b 296 Gene3D G3DSA:3.40.190.10 269 294 3.7E-20 T 13-09-2016 PMA3_RS16595 0d3edb146e276f3cfd6fb27b94ee2e9b 296 Gene3D G3DSA:3.40.190.10 89 170 3.7E-20 T 13-09-2016 PMA3_RS16595 0d3edb146e276f3cfd6fb27b94ee2e9b 296 Gene3D G3DSA:3.40.190.10 171 265 2.7E-25 T 13-09-2016 PMA3_RS16595 0d3edb146e276f3cfd6fb27b94ee2e9b 296 Pfam PF03466 LysR substrate binding domain 92 293 3.0E-21 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS16595 0d3edb146e276f3cfd6fb27b94ee2e9b 296 SUPERFAMILY SSF53850 91 293 1.76E-33 T 13-09-2016 PMA3_RS16595 0d3edb146e276f3cfd6fb27b94ee2e9b 296 PANTHER PTHR30118 1 294 1.6E-96 T 13-09-2016 PMA3_RS16595 0d3edb146e276f3cfd6fb27b94ee2e9b 296 Gene3D G3DSA:1.10.10.10 1 84 1.3E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17455 67b10f20e223e4656b202444af74ec53 338 Gene3D G3DSA:2.40.40.20 281 338 5.2E-20 T 13-09-2016 PMA3_RS17455 67b10f20e223e4656b202444af74ec53 338 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 6.5E-115 T 13-09-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS17455 67b10f20e223e4656b202444af74ec53 338 PANTHER PTHR30420:SF3 1 336 3.8E-136 T 13-09-2016 PMA3_RS17455 67b10f20e223e4656b202444af74ec53 338 SUPERFAMILY SSF55729 1 338 9.39E-115 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS17455 67b10f20e223e4656b202444af74ec53 338 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 7.3E-113 T 13-09-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PMA3_RS17455 67b10f20e223e4656b202444af74ec53 338 PANTHER PTHR30420 1 336 3.8E-136 T 13-09-2016 PMA3_RS15650 35b42cd6370ed7693ab1d5a833daa4d1 90 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 4 90 23.366 T 13-09-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 PMA3_RS15650 35b42cd6370ed7693ab1d5a833daa4d1 90 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 26 88 1.8E-14 T 13-09-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 PMA3_RS15650 35b42cd6370ed7693ab1d5a833daa4d1 90 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 10 90 4.7E-35 T 13-09-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 PMA3_RS07815 d5d7eb67902f6856c5af8583c14b7108 331 Pfam PF03561 Allantoicase repeat 20 164 4.6E-45 T 13-09-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PMA3_RS07815 d5d7eb67902f6856c5af8583c14b7108 331 Pfam PF03561 Allantoicase repeat 187 327 1.0E-47 T 13-09-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PMA3_RS07815 d5d7eb67902f6856c5af8583c14b7108 331 SUPERFAMILY SSF49785 172 329 4.25E-55 T 13-09-2016 IPR008979 Galactose-binding domain-like PMA3_RS07815 d5d7eb67902f6856c5af8583c14b7108 331 Hamap MF_00813 Probable allantoicase [alc]. 1 330 59.0 T 13-09-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PMA3_RS07815 d5d7eb67902f6856c5af8583c14b7108 331 PANTHER PTHR12045 8 330 1.1E-149 T 13-09-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PMA3_RS07815 d5d7eb67902f6856c5af8583c14b7108 331 PIRSF PIRSF016516 1 331 1.4E-153 T 13-09-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PMA3_RS07815 d5d7eb67902f6856c5af8583c14b7108 331 Gene3D G3DSA:2.60.120.260 5 166 8.0E-60 T 13-09-2016 IPR008979 Galactose-binding domain-like PMA3_RS07815 d5d7eb67902f6856c5af8583c14b7108 331 Gene3D G3DSA:2.60.120.260 170 330 1.9E-57 T 13-09-2016 IPR008979 Galactose-binding domain-like PMA3_RS07815 d5d7eb67902f6856c5af8583c14b7108 331 SUPERFAMILY SSF49785 5 167 2.89E-61 T 13-09-2016 IPR008979 Galactose-binding domain-like PMA3_RS07815 d5d7eb67902f6856c5af8583c14b7108 331 TIGRFAM TIGR02961 allantoicase: allantoicase 11 328 3.0E-143 T 13-09-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PMA3_RS05285 90998720bf1d3a1abf06a5a523fa2e4d 537 PANTHER PTHR10617:SF52 471 533 3.7E-169 T 13-09-2016 PMA3_RS05285 90998720bf1d3a1abf06a5a523fa2e4d 537 Gene3D G3DSA:3.50.50.60 101 289 1.5E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS05285 90998720bf1d3a1abf06a5a523fa2e4d 537 Gene3D G3DSA:3.50.50.60 472 532 1.5E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS05285 90998720bf1d3a1abf06a5a523fa2e4d 537 PANTHER PTHR10617:SF52 73 391 3.7E-169 T 13-09-2016 PMA3_RS05285 90998720bf1d3a1abf06a5a523fa2e4d 537 SUPERFAMILY SSF51905 480 531 1.01E-36 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS05285 90998720bf1d3a1abf06a5a523fa2e4d 537 SUPERFAMILY SSF51905 101 287 1.01E-36 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS05285 90998720bf1d3a1abf06a5a523fa2e4d 537 PIRSF PIRSF038984 1 536 3.6E-245 T 13-09-2016 IPR028348 FAD dependent protein PMA3_RS05285 90998720bf1d3a1abf06a5a523fa2e4d 537 PANTHER PTHR10617 73 391 3.7E-169 T 13-09-2016 PMA3_RS05285 90998720bf1d3a1abf06a5a523fa2e4d 537 PANTHER PTHR10617 471 533 3.7E-169 T 13-09-2016 PMA3_RS04275 364562febaafab367a370244d1ab6080 393 Gene3D G3DSA:1.10.3720.10 83 151 1.8E-46 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04275 364562febaafab367a370244d1ab6080 393 Gene3D G3DSA:1.10.3720.10 256 388 1.8E-46 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04275 364562febaafab367a370244d1ab6080 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 388 8.0E-13 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04275 364562febaafab367a370244d1ab6080 393 SUPERFAMILY SSF161098 84 151 5.02E-33 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04275 364562febaafab367a370244d1ab6080 393 SUPERFAMILY SSF161098 256 374 5.02E-33 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04275 364562febaafab367a370244d1ab6080 393 PANTHER PTHR30085:SF1 251 393 2.6E-152 T 13-09-2016 PMA3_RS04275 364562febaafab367a370244d1ab6080 393 PANTHER PTHR30085:SF1 9 172 2.6E-152 T 13-09-2016 PMA3_RS04275 364562febaafab367a370244d1ab6080 393 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 84 147 5.1E-15 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS04275 364562febaafab367a370244d1ab6080 393 PANTHER PTHR30085 9 172 2.6E-152 T 13-09-2016 PMA3_RS04275 364562febaafab367a370244d1ab6080 393 PANTHER PTHR30085 251 393 2.6E-152 T 13-09-2016 PMA3_RS22210 054f296b1a30a10b35b3ab241ce56463 391 Pfam PF13378 Enolase C-terminal domain-like 164 382 1.0E-54 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS22210 054f296b1a30a10b35b3ab241ce56463 391 PANTHER PTHR13794 10 391 3.4E-189 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS22210 054f296b1a30a10b35b3ab241ce56463 391 SUPERFAMILY SSF54826 1 143 7.92E-34 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS22210 054f296b1a30a10b35b3ab241ce56463 391 PANTHER PTHR13794:SF50 10 391 3.4E-189 T 13-09-2016 PMA3_RS22210 054f296b1a30a10b35b3ab241ce56463 391 Gene3D G3DSA:3.20.20.120 145 379 3.0E-71 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS22210 054f296b1a30a10b35b3ab241ce56463 391 SUPERFAMILY SSF51604 127 387 3.14E-69 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS22210 054f296b1a30a10b35b3ab241ce56463 391 SMART SM00922 159 262 6.4E-22 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS22210 054f296b1a30a10b35b3ab241ce56463 391 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 139 8.6E-21 T 13-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PMA3_RS22210 054f296b1a30a10b35b3ab241ce56463 391 Gene3D G3DSA:3.30.390.10 1 144 2.3E-50 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 Gene3D G3DSA:3.50.50.60 4 112 2.3E-12 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 SUPERFAMILY SSF51905 4 324 2.92E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.4E-7 T 13-09-2016 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 295 302 2.4E-7 T 13-09-2016 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 2.4E-7 T 13-09-2016 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 PANTHER PTHR22912:SF141 4 435 2.3E-33 T 13-09-2016 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 Pfam PF04324 BFD-like [2Fe-2S] binding domain 370 421 5.2E-8 T 13-09-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 PIRSF PIRSF037495 1 450 2.9E-139 T 13-09-2016 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 314 1.3E-25 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 Gene3D G3DSA:3.50.50.60 113 322 1.7E-24 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 PANTHER PTHR22912 4 435 2.3E-33 T 13-09-2016 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.1E-10 T 13-09-2016 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.1E-10 T 13-09-2016 PMA3_RS08255 b0d7b19ab024bdeada555572cd9eecd8 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 1.1E-10 T 13-09-2016 PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 PANTHER PTHR30126 20 314 4.2E-75 T 13-09-2016 PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 PANTHER PTHR30126:SF3 20 314 4.2E-75 T 13-09-2016 PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 81 3.3E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 SUPERFAMILY SSF53850 110 314 1.09E-35 T 13-09-2016 PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 Gene3D G3DSA:3.40.190.10 108 197 2.5E-15 T 13-09-2016 PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 Gene3D G3DSA:3.40.190.10 198 283 4.4E-16 T 13-09-2016 PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 2.2E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 58 2.2E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 58 69 2.2E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 Gene3D G3DSA:1.10.10.10 21 106 1.2E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 Pfam PF03466 LysR substrate binding domain 107 314 1.0E-34 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS19310 9a49b194e2a6ad08869bfe1d0a03eded 315 SUPERFAMILY SSF46785 20 126 2.0E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05195 8d04adee3ff62261019c48bd7434b866 816 PIRSF PIRSF001227 11 812 2.8E-152 T 13-09-2016 IPR014395 Penicillin acylase GO:0016811 PMA3_RS05195 8d04adee3ff62261019c48bd7434b866 816 PANTHER PTHR34218 1 816 6.6E-214 T 13-09-2016 PMA3_RS05195 8d04adee3ff62261019c48bd7434b866 816 Pfam PF01804 Penicillin amidase 53 802 3.2E-185 T 13-09-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 PMA3_RS05195 8d04adee3ff62261019c48bd7434b866 816 Gene3D G3DSA:1.10.439.10 38 206 6.0E-46 T 13-09-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 PMA3_RS05195 8d04adee3ff62261019c48bd7434b866 816 PANTHER PTHR34218:SF2 1 816 6.6E-214 T 13-09-2016 PMA3_RS05195 8d04adee3ff62261019c48bd7434b866 816 SUPERFAMILY SSF56235 49 809 5.14E-200 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS05195 8d04adee3ff62261019c48bd7434b866 816 Gene3D G3DSA:3.60.20.10 418 665 2.2E-86 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS05195 8d04adee3ff62261019c48bd7434b866 816 Gene3D G3DSA:3.60.20.10 262 337 2.2E-86 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS05195 8d04adee3ff62261019c48bd7434b866 816 Gene3D G3DSA:2.30.120.10 338 399 1.0E-16 T 13-09-2016 PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 Gene3D G3DSA:3.40.50.620 152 294 9.5E-27 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 Pfam PF00582 Universal stress protein family 8 143 2.7E-11 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 Pfam PF00582 Universal stress protein family 168 294 6.4E-17 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 PANTHER PTHR31964:SF26 240 294 4.5E-12 T 13-09-2016 PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 SUPERFAMILY SSF52402 168 294 1.76E-22 T 13-09-2016 PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 SUPERFAMILY SSF52402 4 143 8.04E-20 T 13-09-2016 PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 PRINTS PR01438 Universal stress protein signature 273 294 6.9E-5 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 PRINTS PR01438 Universal stress protein signature 256 268 6.9E-5 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 Gene3D G3DSA:3.40.50.620 1 143 2.2E-19 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 PANTHER PTHR31964 240 294 4.5E-12 T 13-09-2016 PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 PANTHER PTHR31964 20 86 4.5E-12 T 13-09-2016 PMA3_RS09955 80876d75bc94a2d448f428b980529141 294 PANTHER PTHR31964:SF26 20 86 4.5E-12 T 13-09-2016 PMA3_RS09325 5bd0de613f8125576337636ee322264b 342 PANTHER PTHR12304 1 341 7.4E-149 T 13-09-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase PMA3_RS09325 5bd0de613f8125576337636ee322264b 342 PANTHER PTHR12304:SF19 1 341 7.4E-149 T 13-09-2016 PMA3_RS09325 5bd0de613f8125576337636ee322264b 342 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 34 327 1.1E-65 T 13-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PMA3_RS09325 5bd0de613f8125576337636ee322264b 342 SUPERFAMILY SSF53590 32 340 4.97E-93 T 13-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PMA3_RS09325 5bd0de613f8125576337636ee322264b 342 Gene3D G3DSA:3.90.245.10 31 341 3.8E-96 T 13-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PMA3_RS09325 5bd0de613f8125576337636ee322264b 342 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 37 47 - T 13-09-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 PMA3_RS22155 c8a1128adbd0d55cd93942825e3504a3 186 PANTHER PTHR11071 31 186 6.0E-71 T 13-09-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PMA3_RS22155 c8a1128adbd0d55cd93942825e3504a3 186 Gene3D G3DSA:2.40.100.10 26 185 2.1E-55 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS22155 c8a1128adbd0d55cd93942825e3504a3 186 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 155 1.8E-10 T 13-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PMA3_RS22155 c8a1128adbd0d55cd93942825e3504a3 186 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 1.8E-10 T 13-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PMA3_RS22155 c8a1128adbd0d55cd93942825e3504a3 186 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 1.8E-10 T 13-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PMA3_RS22155 c8a1128adbd0d55cd93942825e3504a3 186 SUPERFAMILY SSF50891 26 185 1.9E-56 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS22155 c8a1128adbd0d55cd93942825e3504a3 186 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 184 3.7E-48 T 13-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PMA3_RS22155 c8a1128adbd0d55cd93942825e3504a3 186 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 13-09-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PMA3_RS22155 c8a1128adbd0d55cd93942825e3504a3 186 PANTHER PTHR11071:SF265 31 186 6.0E-71 T 13-09-2016 PMA3_RS05075 f4d89e14a1455f5a86a23275dc956ddc 633 Pfam PF02705 K+ potassium transporter 23 554 5.0E-209 T 13-09-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 PMA3_RS05075 f4d89e14a1455f5a86a23275dc956ddc 633 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 633 34.219 T 13-09-2016 IPR023051 Potassium uptake protein, low affinity, Kup PMA3_RS05075 f4d89e14a1455f5a86a23275dc956ddc 633 PANTHER PTHR30540 25 589 7.9E-244 T 13-09-2016 PMA3_RS05075 f4d89e14a1455f5a86a23275dc956ddc 633 PANTHER PTHR30540:SF7 25 589 7.9E-244 T 13-09-2016 PMA3_RS10260 59cb1e07cf02de20dee475cb34a43f3f 441 PANTHER PTHR13847:SF196 10 107 9.4E-53 T 13-09-2016 PMA3_RS10260 59cb1e07cf02de20dee475cb34a43f3f 441 PANTHER PTHR13847 10 107 9.4E-53 T 13-09-2016 PMA3_RS10260 59cb1e07cf02de20dee475cb34a43f3f 441 PANTHER PTHR13847 127 425 9.4E-53 T 13-09-2016 PMA3_RS10260 59cb1e07cf02de20dee475cb34a43f3f 441 Gene3D G3DSA:3.50.50.60 35 127 2.7E-36 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10260 59cb1e07cf02de20dee475cb34a43f3f 441 Gene3D G3DSA:3.50.50.60 181 260 2.7E-36 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10260 59cb1e07cf02de20dee475cb34a43f3f 441 Gene3D G3DSA:3.50.50.60 359 405 2.7E-36 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10260 59cb1e07cf02de20dee475cb34a43f3f 441 SUPERFAMILY SSF51905 36 261 4.32E-36 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10260 59cb1e07cf02de20dee475cb34a43f3f 441 SUPERFAMILY SSF51905 359 402 4.32E-36 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10260 59cb1e07cf02de20dee475cb34a43f3f 441 Pfam PF01266 FAD dependent oxidoreductase 36 395 1.6E-33 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS10260 59cb1e07cf02de20dee475cb34a43f3f 441 PANTHER PTHR13847:SF196 127 425 9.4E-53 T 13-09-2016 PMA3_RS06155 a235503a61e295ff6f600143c981a197 212 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 188 3.1E-34 T 13-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PMA3_RS06155 a235503a61e295ff6f600143c981a197 212 PANTHER PTHR30625:SF0 1 196 2.5E-58 T 13-09-2016 PMA3_RS06155 a235503a61e295ff6f600143c981a197 212 PANTHER PTHR30625 1 196 2.5E-58 T 13-09-2016 PMA3_RS15170 ae0d8c684392dfac59c39f8c50aebf11 319 PIRSF PIRSF002849 1 319 1.0E-126 T 13-09-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted PMA3_RS15170 ae0d8c684392dfac59c39f8c50aebf11 319 PANTHER PTHR11603:SF148 1 318 1.8E-150 T 13-09-2016 PMA3_RS15170 ae0d8c684392dfac59c39f8c50aebf11 319 PANTHER PTHR11603 1 318 1.8E-150 T 13-09-2016 PMA3_RS15170 ae0d8c684392dfac59c39f8c50aebf11 319 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 167 2.3E-63 T 13-09-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PMA3_RS15170 ae0d8c684392dfac59c39f8c50aebf11 319 Gene3D G3DSA:1.10.8.300 201 315 7.8E-42 T 13-09-2016 PMA3_RS15170 ae0d8c684392dfac59c39f8c50aebf11 319 SUPERFAMILY SSF52540 4 291 2.6E-42 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15170 ae0d8c684392dfac59c39f8c50aebf11 319 Gene3D G3DSA:3.40.50.300 19 183 6.0E-42 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 SUPERFAMILY SSF56014 639 814 2.36E-48 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 Gene3D G3DSA:3.50.50.60 239 316 1.7E-7 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 685 701 - T 13-09-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 SUPERFAMILY SSF51905 156 314 6.79E-23 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PANTHER PTHR11493 9 262 7.4E-268 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 Gene3D G3DSA:3.50.50.60 114 238 1.2E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PANTHER PTHR11493:SF52 424 840 7.4E-268 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PANTHER PTHR11493:SF52 9 262 7.4E-268 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 566 629 5.9E-11 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 6.4E-14 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 6.4E-14 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 6.4E-14 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 6.4E-14 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PIRSF PIRSF037149 6 841 0.0 T 13-09-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 638 757 4.4E-18 T 13-09-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 SUPERFAMILY SSF55124 516 647 1.96E-24 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 Gene3D G3DSA:3.50.50.60 12 113 4.6E-23 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 Gene3D G3DSA:3.30.413.10 638 774 4.7E-32 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 SUPERFAMILY SSF51905 12 197 3.38E-39 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 Pfam PF04324 BFD-like [2Fe-2S] binding domain 428 476 3.2E-7 T 13-09-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 14 807 0.0 T 13-09-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 289 3.6E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PANTHER PTHR11493 424 840 7.4E-268 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 2.6E-10 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 2.6E-10 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 282 289 2.6E-10 T 13-09-2016 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PRINTS PR00397 Sirohaem Fe-binding site signature 642 660 9.2E-7 T 13-09-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS16430 96835a929b449fabf9b8006b6f2ccf83 853 PRINTS PR00397 Sirohaem Fe-binding site signature 685 703 9.2E-7 T 13-09-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 381 4.5E-7 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 PANTHER PTHR23135 1 448 4.9E-157 T 13-09-2016 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 Pfam PF08245 Mur ligase middle domain 114 285 3.1E-25 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 Gene3D G3DSA:3.40.1190.10 98 305 1.2E-62 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 Gene3D G3DSA:3.40.50.720 11 95 6.4E-17 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 SUPERFAMILY SSF53623 99 303 5.89E-52 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 445 2.3E-119 T 13-09-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 SUPERFAMILY SSF51984 11 96 4.05E-15 T 13-09-2016 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 Gene3D G3DSA:3.90.190.20 307 444 1.2E-46 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 SUPERFAMILY SSF53244 305 447 9.46E-46 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 447 34.03 T 13-09-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS04135 d224eaf124d951f201970dd171ef4ace 448 PANTHER PTHR23135:SF2 1 448 4.9E-157 T 13-09-2016 PMA3_RS25935 ab239e86f5b6fea75e3dc65680298442 449 Gene3D G3DSA:3.40.640.10 71 349 3.6E-82 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS25935 ab239e86f5b6fea75e3dc65680298442 449 Pfam PF00202 Aminotransferase class-III 24 445 1.2E-135 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS25935 ab239e86f5b6fea75e3dc65680298442 449 SUPERFAMILY SSF53383 19 447 1.07E-115 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS25935 ab239e86f5b6fea75e3dc65680298442 449 PANTHER PTHR11986 20 446 1.4E-241 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS25935 ab239e86f5b6fea75e3dc65680298442 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS25935 ab239e86f5b6fea75e3dc65680298442 449 PANTHER PTHR11986:SF72 20 446 1.4E-241 T 13-09-2016 PMA3_RS25935 ab239e86f5b6fea75e3dc65680298442 449 Gene3D G3DSA:3.90.1150.10 14 69 8.9E-33 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS25935 ab239e86f5b6fea75e3dc65680298442 449 Gene3D G3DSA:3.90.1150.10 351 448 8.9E-33 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS20980 772ac78905a92e4f83fc8c448d8e7838 358 PANTHER PTHR10233 9 358 2.9E-150 T 13-09-2016 PMA3_RS20980 772ac78905a92e4f83fc8c448d8e7838 358 Gene3D G3DSA:3.40.50.10470 167 348 1.2E-64 T 13-09-2016 PMA3_RS20980 772ac78905a92e4f83fc8c448d8e7838 358 Gene3D G3DSA:1.20.120.420 11 166 1.7E-48 T 13-09-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 PMA3_RS20980 772ac78905a92e4f83fc8c448d8e7838 358 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 12 341 8.4E-137 T 13-09-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 PMA3_RS20980 772ac78905a92e4f83fc8c448d8e7838 358 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 10 352 38.967 T 13-09-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 PMA3_RS20980 772ac78905a92e4f83fc8c448d8e7838 358 Pfam PF01008 Initiation factor 2 subunit family 53 341 1.9E-70 T 13-09-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 PMA3_RS20980 772ac78905a92e4f83fc8c448d8e7838 358 SUPERFAMILY SSF100950 9 343 5.23E-110 T 13-09-2016 PMA3_RS20980 772ac78905a92e4f83fc8c448d8e7838 358 PANTHER PTHR10233:SF6 9 358 2.9E-150 T 13-09-2016 PMA3_RS20980 772ac78905a92e4f83fc8c448d8e7838 358 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 43 341 3.6E-102 T 13-09-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 PMA3_RS23015 560b1ec0ed0fe29917bcce3847227d8b 286 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 235 9.3E-35 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS23015 560b1ec0ed0fe29917bcce3847227d8b 286 SUPERFAMILY SSF111369 42 212 7.06E-21 T 13-09-2016 PMA3_RS23015 560b1ec0ed0fe29917bcce3847227d8b 286 PANTHER PTHR30367:SF3 5 283 1.1E-117 T 13-09-2016 PMA3_RS23015 560b1ec0ed0fe29917bcce3847227d8b 286 PANTHER PTHR30367 5 283 1.1E-117 T 13-09-2016 PMA3_RS23015 560b1ec0ed0fe29917bcce3847227d8b 286 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 229 3.1E-18 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS23015 560b1ec0ed0fe29917bcce3847227d8b 286 Pfam PF00529 HlyD membrane-fusion protein of T1SS 16 282 1.3E-6 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS23015 560b1ec0ed0fe29917bcce3847227d8b 286 Gene3D G3DSA:2.40.50.100 150 183 8.0E-17 T 13-09-2016 PMA3_RS23015 560b1ec0ed0fe29917bcce3847227d8b 286 Gene3D G3DSA:2.40.50.100 43 76 8.0E-17 T 13-09-2016 PMA3_RS14855 784c91e0a5081d82041d4a65cae16486 552 SUPERFAMILY SSF56801 27 542 7.72E-138 T 13-09-2016 PMA3_RS14855 784c91e0a5081d82041d4a65cae16486 552 Gene3D G3DSA:2.30.38.10 363 437 1.8E-9 T 13-09-2016 PMA3_RS14855 784c91e0a5081d82041d4a65cae16486 552 PANTHER PTHR24095 28 547 8.9E-165 T 13-09-2016 PMA3_RS14855 784c91e0a5081d82041d4a65cae16486 552 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 3.5E-26 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS14855 784c91e0a5081d82041d4a65cae16486 552 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS14855 784c91e0a5081d82041d4a65cae16486 552 Gene3D G3DSA:3.40.50.980 41 197 5.3E-35 T 13-09-2016 PMA3_RS14855 784c91e0a5081d82041d4a65cae16486 552 Pfam PF00501 AMP-binding enzyme 41 443 2.5E-71 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS14855 784c91e0a5081d82041d4a65cae16486 552 Gene3D G3DSA:3.40.50.980 198 360 1.9E-26 T 13-09-2016 PMA3_RS14855 784c91e0a5081d82041d4a65cae16486 552 Gene3D G3DSA:3.30.300.30 438 539 5.0E-31 T 13-09-2016 PMA3_RS12855 6aa5c1ba825aa392b5cacc9beba8e68b 283 PANTHER PTHR31157 20 283 4.7E-65 T 13-09-2016 PMA3_RS12855 6aa5c1ba825aa392b5cacc9beba8e68b 283 PANTHER PTHR31157:SF1 20 283 4.7E-65 T 13-09-2016 PMA3_RS12855 6aa5c1ba825aa392b5cacc9beba8e68b 283 Gene3D G3DSA:3.40.33.10 146 281 5.4E-15 T 13-09-2016 IPR014044 CAP domain PMA3_RS12855 6aa5c1ba825aa392b5cacc9beba8e68b 283 SUPERFAMILY SSF55797 146 281 1.83E-24 T 13-09-2016 IPR014044 CAP domain PMA3_RS12855 6aa5c1ba825aa392b5cacc9beba8e68b 283 Pfam PF00188 Cysteine-rich secretory protein family 157 280 5.1E-21 T 13-09-2016 IPR014044 CAP domain PMA3_RS04840 1048f43a76e884e2831277bca3d21f84 185 Gene3D G3DSA:1.10.132.20 67 185 4.0E-38 T 13-09-2016 IPR023584 Ribosome recycling factor domain PMA3_RS04840 1048f43a76e884e2831277bca3d21f84 185 SUPERFAMILY SSF55194 1 185 3.27E-65 T 13-09-2016 IPR023584 Ribosome recycling factor domain PMA3_RS04840 1048f43a76e884e2831277bca3d21f84 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 24.907 T 13-09-2016 IPR002661 Ribosome recycling factor GO:0006412 PMA3_RS04840 1048f43a76e884e2831277bca3d21f84 185 Pfam PF01765 Ribosome recycling factor 21 183 9.2E-55 T 13-09-2016 IPR023584 Ribosome recycling factor domain PMA3_RS04840 1048f43a76e884e2831277bca3d21f84 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.3E-60 T 13-09-2016 IPR002661 Ribosome recycling factor GO:0006412 PMA3_RS04840 1048f43a76e884e2831277bca3d21f84 185 PANTHER PTHR20982 1 185 7.4E-70 T 13-09-2016 IPR002661 Ribosome recycling factor GO:0006412 PMA3_RS28745 06211c65573990c81f2cba48ee4d15f0 268 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 254 8.5E-81 T 13-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PMA3_RS28745 06211c65573990c81f2cba48ee4d15f0 268 PANTHER PTHR30589:SF0 1 265 5.8E-112 T 13-09-2016 PMA3_RS28745 06211c65573990c81f2cba48ee4d15f0 268 PANTHER PTHR30589 1 265 5.8E-112 T 13-09-2016 PMA3_RS28745 06211c65573990c81f2cba48ee4d15f0 268 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 260 7.5E-84 T 13-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PMA3_RS28745 06211c65573990c81f2cba48ee4d15f0 268 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 13-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PMA3_RS28745 06211c65573990c81f2cba48ee4d15f0 268 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 260 20.021 T 13-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PMA3_RS08645 82a8bea0c41148134a8b1e16b16ac5da 235 PANTHER PTHR30055 4 171 7.6E-45 T 13-09-2016 PMA3_RS08645 82a8bea0c41148134a8b1e16b16ac5da 235 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 13-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PMA3_RS08645 82a8bea0c41148134a8b1e16b16ac5da 235 SUPERFAMILY SSF46689 4 67 1.95E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS08645 82a8bea0c41148134a8b1e16b16ac5da 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.5E-11 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS08645 82a8bea0c41148134a8b1e16b16ac5da 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.5E-11 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS08645 82a8bea0c41148134a8b1e16b16ac5da 235 SUPERFAMILY SSF48498 81 208 7.78E-41 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS08645 82a8bea0c41148134a8b1e16b16ac5da 235 PANTHER PTHR30055:SF73 4 171 7.6E-45 T 13-09-2016 PMA3_RS08645 82a8bea0c41148134a8b1e16b16ac5da 235 Gene3D G3DSA:1.10.357.10 3 208 4.9E-43 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS08645 82a8bea0c41148134a8b1e16b16ac5da 235 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 2.0E-15 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS10265 b10a480aed721516a97ae23abfe84e30 501 Pfam PF00171 Aldehyde dehydrogenase family 32 491 6.5E-170 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS10265 b10a480aed721516a97ae23abfe84e30 501 Gene3D G3DSA:3.40.605.10 22 281 1.2E-98 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS10265 b10a480aed721516a97ae23abfe84e30 501 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS10265 b10a480aed721516a97ae23abfe84e30 501 Gene3D G3DSA:3.40.309.10 282 465 1.5E-64 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS10265 b10a480aed721516a97ae23abfe84e30 501 SUPERFAMILY SSF53720 16 495 9.42E-163 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS10265 b10a480aed721516a97ae23abfe84e30 501 PANTHER PTHR11699:SF174 1 501 0.0 T 13-09-2016 PMA3_RS10265 b10a480aed721516a97ae23abfe84e30 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS10265 b10a480aed721516a97ae23abfe84e30 501 PANTHER PTHR11699 1 501 0.0 T 13-09-2016 PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 5 162 3.2E-72 T 13-09-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 Pfam PF01068 ATP dependent DNA ligase domain 229 410 9.3E-27 T 13-09-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 Gene3D G3DSA:3.30.1490.70 368 411 3.9E-16 T 13-09-2016 PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 Gene3D G3DSA:3.30.1490.70 222 251 3.9E-16 T 13-09-2016 PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 PANTHER PTHR10459:SF70 224 534 2.1E-75 T 13-09-2016 PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 SUPERFAMILY SSF50249 413 533 3.94E-31 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 622 864 1.8E-89 T 13-09-2016 IPR014145 DNA ligase D, polymerase domain PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 Gene3D G3DSA:2.40.50.140 413 532 3.0E-46 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 PANTHER PTHR10459 224 534 2.1E-75 T 13-09-2016 PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 230 531 1.5E-107 T 13-09-2016 IPR014146 DNA ligase D, ligase domain PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 SUPERFAMILY SSF56091 213 411 1.53E-47 T 13-09-2016 PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 240 893 1.2E-220 T 13-09-2016 IPR014143 DNA ligase D PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 Gene3D G3DSA:3.30.470.30 252 361 5.6E-31 T 13-09-2016 PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 Pfam PF13298 DNA polymerase Ligase (LigD) 40 143 2.9E-39 T 13-09-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain PMA3_RS17295 3cfd2375fd8f424a00bc9128e011d119 911 Pfam PF04679 ATP dependent DNA ligase C terminal region 429 525 2.7E-25 T 13-09-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 PMA3_RS05390 b58dec395f48a0f6a4b6611a824ee744 285 PANTHER PTHR13707 1 265 2.7E-138 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS05390 b58dec395f48a0f6a4b6611a824ee744 285 Pfam PF01144 Coenzyme A transferase 6 214 3.9E-24 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS05390 b58dec395f48a0f6a4b6611a824ee744 285 SMART SM00882 4 224 5.9E-43 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS05390 b58dec395f48a0f6a4b6611a824ee744 285 Gene3D G3DSA:3.40.1080.10 158 281 2.2E-86 T 13-09-2016 PMA3_RS05390 b58dec395f48a0f6a4b6611a824ee744 285 Gene3D G3DSA:3.40.1080.10 4 120 2.2E-86 T 13-09-2016 PMA3_RS05390 b58dec395f48a0f6a4b6611a824ee744 285 SUPERFAMILY SSF100950 4 278 4.31E-77 T 13-09-2016 PMA3_RS05390 b58dec395f48a0f6a4b6611a824ee744 285 PANTHER PTHR13707:SF33 1 265 2.7E-138 T 13-09-2016 PMA3_RS24220 a5fcdd18ca02fba6d874c408a0f7da99 337 Gene3D G3DSA:1.10.260.40 13 87 3.7E-9 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS24220 a5fcdd18ca02fba6d874c408a0f7da99 337 SMART SM00530 19 80 7.9E-5 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS24220 a5fcdd18ca02fba6d874c408a0f7da99 337 Pfam PF13413 Helix-turn-helix domain 20 77 6.5E-21 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS24220 a5fcdd18ca02fba6d874c408a0f7da99 337 SUPERFAMILY SSF47413 14 81 5.63E-8 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS24220 a5fcdd18ca02fba6d874c408a0f7da99 337 PANTHER PTHR34475 3 337 1.5E-47 T 13-09-2016 PMA3_RS24220 a5fcdd18ca02fba6d874c408a0f7da99 337 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 30 56 - T 13-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS24220 a5fcdd18ca02fba6d874c408a0f7da99 337 PANTHER PTHR34475:SF1 3 337 1.5E-47 T 13-09-2016 PMA3_RS24220 a5fcdd18ca02fba6d874c408a0f7da99 337 Pfam PF13464 Domain of unknown function (DUF4115) 262 335 1.9E-24 T 13-09-2016 IPR025194 Domain of unknown function DUF4115 PMA3_RS00765 0d4fa8325d6432075240baeb43702afe 264 PANTHER PTHR24220:SF564 5 208 5.0E-110 T 13-09-2016 PMA3_RS00765 0d4fa8325d6432075240baeb43702afe 264 PANTHER PTHR24220 5 208 5.0E-110 T 13-09-2016 PMA3_RS00765 0d4fa8325d6432075240baeb43702afe 264 Pfam PF00005 ABC transporter 21 160 3.8E-28 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS00765 0d4fa8325d6432075240baeb43702afe 264 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS00765 0d4fa8325d6432075240baeb43702afe 264 SMART SM00382 30 211 1.9E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS00765 0d4fa8325d6432075240baeb43702afe 264 SUPERFAMILY SSF52540 3 215 9.42E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00765 0d4fa8325d6432075240baeb43702afe 264 Gene3D G3DSA:3.40.50.300 2 216 2.5E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12095 f139fad5eae9f0a88828bc3de018a4d5 262 SUPERFAMILY SSF161098 13 259 1.78E-57 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12095 f139fad5eae9f0a88828bc3de018a4d5 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 256 1.7E-18 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12095 f139fad5eae9f0a88828bc3de018a4d5 262 PANTHER PTHR30222:SF7 11 258 4.8E-104 T 13-09-2016 PMA3_RS12095 f139fad5eae9f0a88828bc3de018a4d5 262 Gene3D G3DSA:1.10.3720.10 16 261 3.7E-59 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12095 f139fad5eae9f0a88828bc3de018a4d5 262 PANTHER PTHR30222 11 258 4.8E-104 T 13-09-2016 PMA3_RS22195 f0588c08b8f3523625512696b037f62e 302 SUPERFAMILY SSF103481 189 292 2.62E-12 T 13-09-2016 PMA3_RS22195 f0588c08b8f3523625512696b037f62e 302 SUPERFAMILY SSF103481 39 139 4.32E-14 T 13-09-2016 PMA3_RS22195 f0588c08b8f3523625512696b037f62e 302 Pfam PF00892 EamA-like transporter family 9 135 1.6E-14 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS22195 f0588c08b8f3523625512696b037f62e 302 Pfam PF00892 EamA-like transporter family 149 289 4.3E-13 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS22195 f0588c08b8f3523625512696b037f62e 302 PANTHER PTHR12715:SF17 5 288 3.1E-48 T 13-09-2016 PMA3_RS22195 f0588c08b8f3523625512696b037f62e 302 PANTHER PTHR12715 5 288 3.1E-48 T 13-09-2016 PMA3_RS21065 25e39c68af1a0308959b96aad270a5c6 230 PANTHER PTHR16254 16 171 1.7E-36 T 13-09-2016 PMA3_RS21065 25e39c68af1a0308959b96aad270a5c6 230 SUPERFAMILY SSF51735 17 146 1.18E-30 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS21065 25e39c68af1a0308959b96aad270a5c6 230 Gene3D G3DSA:3.40.50.720 17 148 9.1E-32 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS21065 25e39c68af1a0308959b96aad270a5c6 230 Gene3D G3DSA:3.30.70.1450 163 226 5.6E-13 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS21065 25e39c68af1a0308959b96aad270a5c6 230 SUPERFAMILY SSF116726 143 226 3.01E-15 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS21065 25e39c68af1a0308959b96aad270a5c6 230 Pfam PF02080 TrkA-C domain 172 226 6.4E-10 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS21065 25e39c68af1a0308959b96aad270a5c6 230 Pfam PF02254 TrkA-N domain 18 133 5.4E-23 T 13-09-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PMA3_RS17990 d97138d2e09f46d3633ef0bc357e2e0c 272 SUPERFAMILY SSF46894 197 267 6.12E-11 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS17990 d97138d2e09f46d3633ef0bc357e2e0c 272 Pfam PF00196 Bacterial regulatory proteins, luxR family 212 263 3.3E-5 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS17990 d97138d2e09f46d3633ef0bc357e2e0c 272 SMART SM00421 209 266 4.5E-4 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS17990 d97138d2e09f46d3633ef0bc357e2e0c 272 Gene3D G3DSA:1.10.10.10 205 268 6.4E-10 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23115 a68ec64a2cc2cddf376d125c84df26e3 316 PANTHER PTHR30514:SF0 1 316 4.9E-70 T 13-09-2016 PMA3_RS23115 a68ec64a2cc2cddf376d125c84df26e3 316 TIGRFAM TIGR00749 glk: glucokinase 5 310 7.9E-76 T 13-09-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 PMA3_RS23115 a68ec64a2cc2cddf376d125c84df26e3 316 PANTHER PTHR30514 1 316 4.9E-70 T 13-09-2016 PMA3_RS23115 a68ec64a2cc2cddf376d125c84df26e3 316 Gene3D G3DSA:3.40.367.20 100 299 3.0E-66 T 13-09-2016 PMA3_RS23115 a68ec64a2cc2cddf376d125c84df26e3 316 Pfam PF02685 Glucokinase 5 315 1.3E-101 T 13-09-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 PMA3_RS23115 a68ec64a2cc2cddf376d125c84df26e3 316 SUPERFAMILY SSF53067 4 312 2.09E-55 T 13-09-2016 PMA3_RS29185 4d3bf0e5b35c9e9d3090e1c1a2db7f4f 193 PANTHER PTHR30221 11 181 1.8E-51 T 13-09-2016 PMA3_RS29185 4d3bf0e5b35c9e9d3090e1c1a2db7f4f 193 SUPERFAMILY SSF50182 105 180 9.81E-10 T 13-09-2016 IPR010920 LSM domain PMA3_RS29185 4d3bf0e5b35c9e9d3090e1c1a2db7f4f 193 Gene3D G3DSA:2.30.30.60 120 178 2.0E-10 T 13-09-2016 PMA3_RS29185 4d3bf0e5b35c9e9d3090e1c1a2db7f4f 193 Pfam PF00924 Mechanosensitive ion channel 61 182 5.6E-13 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS29185 4d3bf0e5b35c9e9d3090e1c1a2db7f4f 193 SUPERFAMILY SSF82861 22 89 4.18E-5 T 13-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PMA3_RS29185 4d3bf0e5b35c9e9d3090e1c1a2db7f4f 193 PANTHER PTHR30221:SF8 11 181 1.8E-51 T 13-09-2016 PMA3_RS26585 ba7678e1cad253d3d2c45255f05e01e2 367 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 14 362 3.9E-132 T 13-09-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 PMA3_RS26585 ba7678e1cad253d3d2c45255f05e01e2 367 PANTHER PTHR30474 1 366 7.4E-159 T 13-09-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PMA3_RS26585 ba7678e1cad253d3d2c45255f05e01e2 367 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 319 343 - T 13-09-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 PMA3_RS26585 ba7678e1cad253d3d2c45255f05e01e2 367 PANTHER PTHR30474:SF1 1 366 7.4E-159 T 13-09-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 PMA3_RS26585 ba7678e1cad253d3d2c45255f05e01e2 367 Pfam PF01098 Cell cycle protein 21 362 1.7E-109 T 13-09-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PMA3_RS14105 b363a4334b6c105626c6ef2d1876b993 431 SMART SM01154 33 402 1.2E-98 T 13-09-2016 IPR012548 Protein of unknown function DUF1704 PMA3_RS14105 b363a4334b6c105626c6ef2d1876b993 431 PANTHER PTHR31817 209 420 6.1E-16 T 13-09-2016 PMA3_RS14105 b363a4334b6c105626c6ef2d1876b993 431 Pfam PF08014 Domain of unknown function (DUF1704) 42 399 1.5E-105 T 13-09-2016 IPR012548 Protein of unknown function DUF1704 PMA3_RS14105 b363a4334b6c105626c6ef2d1876b993 431 PANTHER PTHR31817:SF4 209 420 6.1E-16 T 13-09-2016 PMA3_RS29195 eb808cba0059a9ebd6962d3e4401f8c8 154 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 3 112 1.6E-36 T 13-09-2016 IPR012659 Conserved hypothetical protein CHP02444 PMA3_RS29195 eb808cba0059a9ebd6962d3e4401f8c8 154 Pfam PF09523 Protein of unknown function (DUF2390) 4 109 7.1E-34 T 13-09-2016 IPR012659 Conserved hypothetical protein CHP02444 PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 248 2.7E-61 T 13-09-2016 PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 8.2E-30 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.2E-30 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.2E-30 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.2E-30 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.2E-30 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.2E-30 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 Gene3D G3DSA:3.40.50.720 1 250 6.3E-77 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PANTHER PTHR24322 11 140 2.8E-53 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PANTHER PTHR24322 156 187 2.8E-53 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.6E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.6E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.6E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09820 8a5415157cd6c82fd2adcbefcd33d734 252 SUPERFAMILY SSF51735 5 249 1.79E-74 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23870 19fa795ebaa883c290157b1e7685b647 343 SUPERFAMILY SSF53474 31 321 5.75E-59 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS23870 19fa795ebaa883c290157b1e7685b647 343 PANTHER PTHR10992:SF732 29 98 2.4E-55 T 13-09-2016 PMA3_RS23870 19fa795ebaa883c290157b1e7685b647 343 PANTHER PTHR10992:SF732 119 323 2.4E-55 T 13-09-2016 PMA3_RS23870 19fa795ebaa883c290157b1e7685b647 343 PANTHER PTHR10992 29 98 2.4E-55 T 13-09-2016 PMA3_RS23870 19fa795ebaa883c290157b1e7685b647 343 PANTHER PTHR10992 119 323 2.4E-55 T 13-09-2016 PMA3_RS23870 19fa795ebaa883c290157b1e7685b647 343 Pfam PF00561 alpha/beta hydrolase fold 53 303 6.7E-23 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS23870 19fa795ebaa883c290157b1e7685b647 343 Gene3D G3DSA:3.40.50.1820 33 322 3.0E-63 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS23065 3021fad262d9f1132337de7643788fd3 289 Pfam PF01380 SIS domain 128 256 1.5E-19 T 13-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PMA3_RS23065 3021fad262d9f1132337de7643788fd3 289 SUPERFAMILY SSF46689 5 81 1.31E-20 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23065 3021fad262d9f1132337de7643788fd3 289 SUPERFAMILY SSF53697 94 281 7.2E-39 T 13-09-2016 PMA3_RS23065 3021fad262d9f1132337de7643788fd3 289 PANTHER PTHR30514 1 287 1.4E-163 T 13-09-2016 PMA3_RS23065 3021fad262d9f1132337de7643788fd3 289 Gene3D G3DSA:3.40.50.10490 99 267 1.4E-35 T 13-09-2016 PMA3_RS23065 3021fad262d9f1132337de7643788fd3 289 PANTHER PTHR30514:SF7 1 287 1.4E-163 T 13-09-2016 PMA3_RS23065 3021fad262d9f1132337de7643788fd3 289 Gene3D G3DSA:1.10.10.10 4 82 4.0E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23065 3021fad262d9f1132337de7643788fd3 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 80 8.1E-29 T 13-09-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 10 327 35.831 T 13-09-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 Gene3D G3DSA:2.160.10.10 212 332 6.1E-21 T 13-09-2016 PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 SUPERFAMILY SSF51161 33 318 3.22E-76 T 13-09-2016 IPR011004 Trimeric LpxA-like PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 9 330 1.9E-113 T 13-09-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 PANTHER PTHR22572:SF117 100 296 2.4E-50 T 13-09-2016 PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 107 135 - T 13-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 PANTHER PTHR22572 100 296 2.4E-50 T 13-09-2016 PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 25 90 1.5E-22 T 13-09-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 Gene3D G3DSA:2.160.10.10 111 211 1.8E-20 T 13-09-2016 PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 181 7.0E-6 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS04875 f4c8c5971981c211f34beb38d194a501 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 223 258 1.5E-6 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS27735 302e26c405b4cdd33bc15a19b4a072c6 607 PANTHER PTHR11731:SF75 36 603 8.7E-134 T 13-09-2016 PMA3_RS27735 302e26c405b4cdd33bc15a19b4a072c6 607 Gene3D G3DSA:3.40.50.1820 370 601 7.7E-62 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS27735 302e26c405b4cdd33bc15a19b4a072c6 607 Gene3D G3DSA:2.130.10.10 81 235 2.3E-9 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS27735 302e26c405b4cdd33bc15a19b4a072c6 607 SUPERFAMILY SSF53474 370 601 1.51E-60 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS27735 302e26c405b4cdd33bc15a19b4a072c6 607 SUPERFAMILY SSF82171 45 286 3.3E-11 T 13-09-2016 PMA3_RS27735 302e26c405b4cdd33bc15a19b4a072c6 607 Pfam PF00326 Prolyl oligopeptidase family 398 603 1.4E-46 T 13-09-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PMA3_RS27735 302e26c405b4cdd33bc15a19b4a072c6 607 PANTHER PTHR11731 36 603 8.7E-134 T 13-09-2016 PMA3_RS09295 905b36271bb28b7e1aa5206852ba5ba3 318 Pfam PF13407 Periplasmic binding protein domain 37 300 5.7E-55 T 13-09-2016 IPR025997 Periplasmic binding protein PMA3_RS09295 905b36271bb28b7e1aa5206852ba5ba3 318 Gene3D G3DSA:3.40.50.2300 161 313 1.7E-47 T 13-09-2016 PMA3_RS09295 905b36271bb28b7e1aa5206852ba5ba3 318 SUPERFAMILY SSF53822 14 318 1.08E-75 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS09295 905b36271bb28b7e1aa5206852ba5ba3 318 PANTHER PTHR32196:SF9 9 317 3.2E-88 T 13-09-2016 PMA3_RS09295 905b36271bb28b7e1aa5206852ba5ba3 318 PANTHER PTHR32196 9 317 3.2E-88 T 13-09-2016 PMA3_RS09295 905b36271bb28b7e1aa5206852ba5ba3 318 Gene3D G3DSA:3.40.50.2300 32 160 1.5E-39 T 13-09-2016 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 SUPERFAMILY SSF55347 179 486 1.99E-114 T 13-09-2016 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 PANTHER PTHR23429:SF0 7 488 7.7E-215 T 13-09-2016 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 Gene3D G3DSA:3.40.50.720 6 183 4.1E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 SUPERFAMILY SSF51735 4 187 5.12E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 184 1.8E-52 T 13-09-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 487 87.168 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 PANTHER PTHR23429 7 488 7.7E-215 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 8 485 4.9E-175 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 Gene3D G3DSA:3.30.360.10 184 485 1.8E-123 T 13-09-2016 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 174 180 - T 13-09-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 234 250 7.1E-49 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 216 233 7.1E-49 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 140 153 7.1E-49 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 325 351 7.1E-49 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 164 192 7.1E-49 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 187 485 1.7E-116 T 13-09-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS23060 9106572d592c3a66d707d93c5b98400e 489 PIRSF PIRSF000110 1 488 2.0E-171 T 13-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 PANTHER PTHR24220:SF282 4 239 1.3E-117 T 13-09-2016 PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 PANTHER PTHR24220:SF282 322 327 1.3E-117 T 13-09-2016 PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 Gene3D G3DSA:3.40.50.300 3 232 1.1E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 PANTHER PTHR24220 257 289 1.3E-117 T 13-09-2016 PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 SUPERFAMILY SSF50331 236 353 2.01E-23 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 SUPERFAMILY SSF52540 3 240 2.93E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 PANTHER PTHR24220 4 239 1.3E-117 T 13-09-2016 PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 PANTHER PTHR24220 322 327 1.3E-117 T 13-09-2016 PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 PANTHER PTHR24220:SF282 257 289 1.3E-117 T 13-09-2016 PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 Pfam PF00005 ABC transporter 20 160 8.4E-24 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 SMART SM00382 27 218 4.0E-4 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS19800 c1417356cab6a62d326eb6a1a8fcebb8 364 Gene3D G3DSA:2.40.50.140 277 338 2.6E-9 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS02675 dbc809905b451354fbef6e5ca0287d61 201 Pfam PF04390 Lipopolysaccharide-assembly 10 154 1.1E-12 T 13-09-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PMA3_RS02675 dbc809905b451354fbef6e5ca0287d61 201 PANTHER PTHR38098:SF1 1 198 8.0E-34 T 13-09-2016 PMA3_RS02675 dbc809905b451354fbef6e5ca0287d61 201 Gene3D G3DSA:3.30.160.150 18 163 3.0E-26 T 13-09-2016 PMA3_RS02675 dbc809905b451354fbef6e5ca0287d61 201 PANTHER PTHR38098 1 198 8.0E-34 T 13-09-2016 PMA3_RS02675 dbc809905b451354fbef6e5ca0287d61 201 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 3 159 20.021 T 13-09-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PMA3_RS02235 3943b04cb74f286de69f26026176b104 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 288 3.0E-51 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS02235 3943b04cb74f286de69f26026176b104 304 PANTHER PTHR11795:SF371 4 304 1.1E-130 T 13-09-2016 PMA3_RS02235 3943b04cb74f286de69f26026176b104 304 PANTHER PTHR11795 4 304 1.1E-130 T 13-09-2016 PMA3_RS02600 227cfe36b7e0d207a3ba129fdab3c110 123 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 15 123 6.9E-35 T 13-09-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 PMA3_RS02600 227cfe36b7e0d207a3ba129fdab3c110 123 Gene3D G3DSA:3.30.780.10 44 123 2.0E-31 T 13-09-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 PMA3_RS02600 227cfe36b7e0d207a3ba129fdab3c110 123 Pfam PF01253 Translation initiation factor SUI1 49 117 5.4E-16 T 13-09-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 PMA3_RS02600 227cfe36b7e0d207a3ba129fdab3c110 123 PANTHER PTHR12789 41 123 2.2E-25 T 13-09-2016 PMA3_RS02600 227cfe36b7e0d207a3ba129fdab3c110 123 SUPERFAMILY SSF55159 13 120 9.42E-28 T 13-09-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 PMA3_RS02600 227cfe36b7e0d207a3ba129fdab3c110 123 PIRSF PIRSF037511 1 123 9.7E-49 T 13-09-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 PMA3_RS28720 9be936343b0298d5574ecfb59f12f4b8 358 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 16 358 3.1E-156 T 13-09-2016 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 PMA3_RS28720 9be936343b0298d5574ecfb59f12f4b8 358 SMART SM00382 40 221 4.2E-20 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS28720 9be936343b0298d5574ecfb59f12f4b8 358 SUPERFAMILY SSF52540 17 252 6.93E-85 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28720 9be936343b0298d5574ecfb59f12f4b8 358 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS28720 9be936343b0298d5574ecfb59f12f4b8 358 SUPERFAMILY SSF50331 248 357 4.08E-7 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS28720 9be936343b0298d5574ecfb59f12f4b8 358 Pfam PF08402 TOBE domain 284 357 1.7E-4 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS28720 9be936343b0298d5574ecfb59f12f4b8 358 Pfam PF00005 ABC transporter 31 171 7.7E-33 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS28720 9be936343b0298d5574ecfb59f12f4b8 358 PANTHER PTHR24220:SF150 17 271 1.3E-115 T 13-09-2016 PMA3_RS28720 9be936343b0298d5574ecfb59f12f4b8 358 PANTHER PTHR24220 17 271 1.3E-115 T 13-09-2016 PMA3_RS28720 9be936343b0298d5574ecfb59f12f4b8 358 Gene3D G3DSA:3.40.50.300 17 246 7.3E-77 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11835 661abb265055fda8930dfdc5561e5df7 250 SUPERFAMILY SSF52096 5 250 2.49E-66 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS11835 661abb265055fda8930dfdc5561e5df7 250 PANTHER PTHR11941 10 250 9.3E-68 T 13-09-2016 PMA3_RS11835 661abb265055fda8930dfdc5561e5df7 250 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 250 1.5E-43 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS11835 661abb265055fda8930dfdc5561e5df7 250 Gene3D G3DSA:3.90.226.10 4 250 5.2E-64 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS10655 a8c321f963433d44c112f32ae9c7749b 135 SUPERFAMILY SSF52016 3 114 1.73E-31 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS10655 a8c321f963433d44c112f32ae9c7749b 135 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 119 7.7E-36 T 13-09-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS10655 a8c321f963433d44c112f32ae9c7749b 135 PANTHER PTHR11670 1 132 3.9E-49 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS10655 a8c321f963433d44c112f32ae9c7749b 135 PANTHER PTHR11670:SF27 1 132 3.9E-49 T 13-09-2016 PMA3_RS10655 a8c321f963433d44c112f32ae9c7749b 135 Gene3D G3DSA:3.20.19.10 3 128 6.4E-28 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS10655 a8c321f963433d44c112f32ae9c7749b 135 Pfam PF00694 Aconitase C-terminal domain 3 56 1.3E-18 T 13-09-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 Gene3D G3DSA:1.10.10.60 158 207 2.5E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 PANTHER PTHR11019:SF121 16 254 2.8E-68 T 13-09-2016 PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 PANTHER PTHR11019 16 254 2.8E-68 T 13-09-2016 PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 Gene3D G3DSA:1.10.10.60 208 252 1.4E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 Pfam PF12833 Helix-turn-helix domain 179 254 4.5E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 SUPERFAMILY SSF46689 207 253 2.51E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 Gene3D G3DSA:2.60.120.10 27 88 2.5E-6 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 Pfam PF02311 AraC-like ligand binding domain 19 101 3.5E-5 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 SUPERFAMILY SSF51182 11 181 6.23E-10 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS20035 764a6ea14444218ba3538b93f5b596e2 254 SMART SM00342 171 253 3.5E-17 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS27590 63092c29e17483a0ca865670ac1a74ee 423 SUPERFAMILY SSF53300 251 347 8.01E-5 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS27590 63092c29e17483a0ca865670ac1a74ee 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 40.636 T 13-09-2016 IPR006698 Uncharacterised protein family UPF0229 PMA3_RS27590 63092c29e17483a0ca865670ac1a74ee 423 Pfam PF04285 Protein of unknown function (DUF444) 4 419 2.5E-178 T 13-09-2016 IPR006698 Uncharacterised protein family UPF0229 PMA3_RS27590 63092c29e17483a0ca865670ac1a74ee 423 PANTHER PTHR30510 1 420 2.2E-174 T 13-09-2016 PMA3_RS09755 f55b4b0d1fe32ef811b5f4790df9e0b8 130 PANTHER PTHR37936 14 130 9.9E-35 T 13-09-2016 PMA3_RS09755 f55b4b0d1fe32ef811b5f4790df9e0b8 130 SUPERFAMILY SSF46689 19 112 2.87E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS09755 f55b4b0d1fe32ef811b5f4790df9e0b8 130 Pfam PF01527 Transposase 17 96 5.2E-27 T 13-09-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PMA3_RS09755 f55b4b0d1fe32ef811b5f4790df9e0b8 130 Gene3D G3DSA:1.10.10.60 23 110 8.6E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS27900 f55b4b0d1fe32ef811b5f4790df9e0b8 130 PANTHER PTHR37936 14 130 9.9E-35 T 13-09-2016 PMA3_RS27900 f55b4b0d1fe32ef811b5f4790df9e0b8 130 SUPERFAMILY SSF46689 19 112 2.87E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS27900 f55b4b0d1fe32ef811b5f4790df9e0b8 130 Pfam PF01527 Transposase 17 96 5.2E-27 T 13-09-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PMA3_RS27900 f55b4b0d1fe32ef811b5f4790df9e0b8 130 Gene3D G3DSA:1.10.10.60 23 110 8.6E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26815 f55b4b0d1fe32ef811b5f4790df9e0b8 130 PANTHER PTHR37936 14 130 9.9E-35 T 13-09-2016 PMA3_RS26815 f55b4b0d1fe32ef811b5f4790df9e0b8 130 SUPERFAMILY SSF46689 19 112 2.87E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26815 f55b4b0d1fe32ef811b5f4790df9e0b8 130 Pfam PF01527 Transposase 17 96 5.2E-27 T 13-09-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PMA3_RS26815 f55b4b0d1fe32ef811b5f4790df9e0b8 130 Gene3D G3DSA:1.10.10.60 23 110 8.6E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS01000 8e563dfaa951f3bbbf9624d4f7c27f63 231 SUPERFAMILY SSF161098 10 208 3.66E-40 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01000 8e563dfaa951f3bbbf9624d4f7c27f63 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 222 4.7E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01000 8e563dfaa951f3bbbf9624d4f7c27f63 231 PANTHER PTHR30133:SF2 4 231 6.4E-113 T 13-09-2016 PMA3_RS01000 8e563dfaa951f3bbbf9624d4f7c27f63 231 Gene3D G3DSA:1.10.3720.10 11 222 3.4E-42 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01000 8e563dfaa951f3bbbf9624d4f7c27f63 231 PANTHER PTHR30133 4 231 6.4E-113 T 13-09-2016 PMA3_RS01000 8e563dfaa951f3bbbf9624d4f7c27f63 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 117 5.0E-20 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 250 266 4.4E-79 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 42 64 4.4E-79 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 163 183 4.4E-79 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 118 139 4.4E-79 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 83 110 4.4E-79 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 267 285 4.4E-79 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 212 241 4.4E-79 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 SUPERFAMILY SSF53223 12 130 9.5E-38 T 13-09-2016 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 271 279 - T 13-09-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 15 129 5.0E-37 T 13-09-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 Hamap MF_01576 Bifunctional protein FolD [folD]. 12 294 37.109 T 13-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 SUPERFAMILY SSF51735 131 290 8.42E-49 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 84 109 - T 13-09-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 Gene3D G3DSA:3.40.192.10 16 148 1.5E-46 T 13-09-2016 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 132 291 5.5E-65 T 13-09-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 PANTHER PTHR10025 2 289 5.1E-146 T 13-09-2016 PMA3_RS11120 3c82125986dfd30b2da0b62ba9f40244 310 Gene3D G3DSA:3.40.50.720 149 275 1.0E-49 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 PIRSF PIRSF000446 2 296 5.7E-58 T 13-09-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 298 9.8E-16 T 13-09-2016 IPR020801 Polyketide synthase, acyl transferase domain PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 Gene3D G3DSA:3.40.366.10 4 108 3.5E-40 T 13-09-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 Gene3D G3DSA:3.40.366.10 183 283 3.5E-40 T 13-09-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 SUPERFAMILY SSF55048 115 175 5.49E-11 T 13-09-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 PANTHER PTHR10982 5 273 1.0E-68 T 13-09-2016 PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 Gene3D G3DSA:3.30.70.250 113 182 2.1E-14 T 13-09-2016 PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 SUPERFAMILY SSF52151 184 283 1.62E-47 T 13-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 SUPERFAMILY SSF52151 5 114 1.62E-47 T 13-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 4 293 6.4E-103 T 13-09-2016 IPR017554 Malonate decarboxylase, McdH subunit PMA3_RS28340 9e0c699bd3aa48764b22415c16eee99b 303 Pfam PF00698 Acyl transferase domain 6 277 4.7E-20 T 13-09-2016 IPR014043 Acyl transferase PMA3_RS13185 056e40e0864d2cc5285881f5de8629bc 745 SUPERFAMILY SSF56935 67 744 1.21E-110 T 13-09-2016 PMA3_RS13185 056e40e0864d2cc5285881f5de8629bc 745 Pfam PF00593 TonB dependent receptor 494 744 3.8E-29 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS13185 056e40e0864d2cc5285881f5de8629bc 745 PANTHER PTHR32552:SF37 67 745 5.8E-197 T 13-09-2016 PMA3_RS13185 056e40e0864d2cc5285881f5de8629bc 745 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 171 9.1E-10 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS13185 056e40e0864d2cc5285881f5de8629bc 745 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 741 2.1E-97 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS13185 056e40e0864d2cc5285881f5de8629bc 745 PANTHER PTHR32552:SF37 16 45 5.8E-197 T 13-09-2016 PMA3_RS13185 056e40e0864d2cc5285881f5de8629bc 745 Gene3D G3DSA:2.40.170.20 190 744 4.1E-116 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS13185 056e40e0864d2cc5285881f5de8629bc 745 PANTHER PTHR32552 16 45 5.8E-197 T 13-09-2016 PMA3_RS13185 056e40e0864d2cc5285881f5de8629bc 745 PANTHER PTHR32552 67 745 5.8E-197 T 13-09-2016 PMA3_RS13185 056e40e0864d2cc5285881f5de8629bc 745 Gene3D G3DSA:2.170.130.10 54 180 5.4E-30 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS01520 ef1ece3ed19d42b212c3abb859bc7284 529 Pfam PF05036 Sporulation related domain 443 515 1.5E-10 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS01520 ef1ece3ed19d42b212c3abb859bc7284 529 SUPERFAMILY SSF52540 19 245 3.32E-19 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01520 ef1ece3ed19d42b212c3abb859bc7284 529 PANTHER PTHR35894:SF1 10 252 1.7E-16 T 13-09-2016 PMA3_RS01520 ef1ece3ed19d42b212c3abb859bc7284 529 Pfam PF13401 AAA domain 49 167 4.3E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS01520 ef1ece3ed19d42b212c3abb859bc7284 529 Gene3D G3DSA:3.40.50.300 52 155 4.5E-9 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01520 ef1ece3ed19d42b212c3abb859bc7284 529 PANTHER PTHR35894 10 252 1.7E-16 T 13-09-2016 PMA3_RS23530 55ad678524af783916e7eef7df128111 482 Gene3D G3DSA:3.40.605.10 9 265 5.1E-93 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS23530 55ad678524af783916e7eef7df128111 482 SUPERFAMILY SSF53720 5 480 4.84E-164 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS23530 55ad678524af783916e7eef7df128111 482 Pfam PF00171 Aldehyde dehydrogenase family 19 478 7.9E-167 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS23530 55ad678524af783916e7eef7df128111 482 PANTHER PTHR11699 9 478 6.5E-214 T 13-09-2016 PMA3_RS23530 55ad678524af783916e7eef7df128111 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS23530 55ad678524af783916e7eef7df128111 482 Gene3D G3DSA:3.40.309.10 266 453 5.0E-69 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS01385 c3ee898325742751bb046856cc52984c 207 PANTHER PTHR38693:SF1 6 205 2.9E-57 T 13-09-2016 PMA3_RS01385 c3ee898325742751bb046856cc52984c 207 Pfam PF02036 SCP-2 sterol transfer family 14 111 6.4E-17 T 13-09-2016 IPR003033 SCP2 sterol-binding domain PMA3_RS01385 c3ee898325742751bb046856cc52984c 207 SUPERFAMILY SSF55718 24 119 3.3E-8 T 13-09-2016 IPR003033 SCP2 sterol-binding domain PMA3_RS01385 c3ee898325742751bb046856cc52984c 207 PANTHER PTHR38693 6 205 2.9E-57 T 13-09-2016 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 SUPERFAMILY SSF53748 4 383 2.59E-143 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 7.4E-79 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 7.4E-79 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 7.4E-79 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 7.4E-79 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 7.4E-79 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 7.4E-79 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 7.4E-79 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 7.4E-79 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 7.4E-79 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 Pfam PF00162 Phosphoglycerate kinase 6 373 4.4E-138 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.675 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 Gene3D G3DSA:3.40.50.1270 175 371 2.8E-80 T 13-09-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PANTHER PTHR11406 1 387 3.6E-196 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 Gene3D G3DSA:3.40.50.1260 5 174 4.9E-64 T 13-09-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 PIRSF PIRSF000724 1 387 3.4E-131 T 13-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS28205 087a32cabceed42d5b08adab06269b43 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 13-09-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PMA3_RS18080 ba1ed3b722611887891af66b243bd459 262 PANTHER PTHR30143 9 261 1.9E-69 T 13-09-2016 PMA3_RS18080 ba1ed3b722611887891af66b243bd459 262 Gene3D G3DSA:3.90.850.10 7 261 2.5E-85 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS18080 ba1ed3b722611887891af66b243bd459 262 SUPERFAMILY SSF56529 7 261 6.41E-79 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS18080 ba1ed3b722611887891af66b243bd459 262 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 260 2.7E-12 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS18080 ba1ed3b722611887891af66b243bd459 262 TIGRFAM TIGR03220 catechol_dmpE: 2-oxopent-4-enoate hydratase 8 261 1.4E-131 T 13-09-2016 IPR017632 2-oxopent-4-enoate hydratase PMA3_RS06950 92a6d0ee2f733101dbed687e766c4ad7 104 SUPERFAMILY SSF103481 5 101 6.67E-19 T 13-09-2016 PMA3_RS06950 92a6d0ee2f733101dbed687e766c4ad7 104 PANTHER PTHR30561:SF0 1 103 4.6E-49 T 13-09-2016 PMA3_RS06950 92a6d0ee2f733101dbed687e766c4ad7 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.8E-29 T 13-09-2016 IPR000390 Small multidrug resistance protein family GO:0016021 PMA3_RS06950 92a6d0ee2f733101dbed687e766c4ad7 104 PANTHER PTHR30561 1 103 4.6E-49 T 13-09-2016 PMA3_RS21905 feee1d26950d8caed1a9993e6e42041a 198 PANTHER PTHR36917:SF1 1 198 1.2E-61 T 13-09-2016 PMA3_RS21905 feee1d26950d8caed1a9993e6e42041a 198 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 188 8.2E-54 T 13-09-2016 IPR006008 Intracellular septation protein A GO:0016021 PMA3_RS21905 feee1d26950d8caed1a9993e6e42041a 198 Pfam PF04279 Intracellular septation protein A 1 187 1.4E-58 T 13-09-2016 IPR006008 Intracellular septation protein A GO:0016021 PMA3_RS21905 feee1d26950d8caed1a9993e6e42041a 198 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 189 17.726 T 13-09-2016 IPR006008 Intracellular septation protein A GO:0016021 PMA3_RS21905 feee1d26950d8caed1a9993e6e42041a 198 PANTHER PTHR36917 1 198 1.2E-61 T 13-09-2016 PMA3_RS00065 a231fbda674a38d48709c05a226aec5f 211 Gene3D G3DSA:3.40.30.10 11 209 1.4E-53 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS00065 a231fbda674a38d48709c05a226aec5f 211 Pfam PF02630 SCO1/SenC 54 186 3.1E-35 T 13-09-2016 IPR003782 Copper chaperone SCO1/SenC PMA3_RS00065 a231fbda674a38d48709c05a226aec5f 211 SUPERFAMILY SSF52833 50 207 1.06E-46 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS00065 a231fbda674a38d48709c05a226aec5f 211 PANTHER PTHR12151 5 210 3.6E-60 T 13-09-2016 IPR003782 Copper chaperone SCO1/SenC PMA3_RS00065 a231fbda674a38d48709c05a226aec5f 211 PANTHER PTHR12151:SF0 5 210 3.6E-60 T 13-09-2016 PMA3_RS15800 faab9e7eca597d9cd59184e3bb0b84b1 233 Gene3D G3DSA:3.40.50.2300 1 122 1.4E-38 T 13-09-2016 PMA3_RS15800 faab9e7eca597d9cd59184e3bb0b84b1 233 SUPERFAMILY SSF52172 1 126 1.1E-39 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS15800 faab9e7eca597d9cd59184e3bb0b84b1 233 SMART SM00448 2 113 1.0E-39 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15800 faab9e7eca597d9cd59184e3bb0b84b1 233 SMART SM00862 150 226 1.1E-23 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS15800 faab9e7eca597d9cd59184e3bb0b84b1 233 PANTHER PTHR26402 2 229 8.5E-91 T 13-09-2016 PMA3_RS15800 faab9e7eca597d9cd59184e3bb0b84b1 233 Pfam PF00072 Response regulator receiver domain 4 113 7.4E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15800 faab9e7eca597d9cd59184e3bb0b84b1 233 SUPERFAMILY SSF46894 129 226 1.73E-27 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS15800 faab9e7eca597d9cd59184e3bb0b84b1 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 1.4E-23 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS15800 faab9e7eca597d9cd59184e3bb0b84b1 233 Gene3D G3DSA:1.10.10.10 130 228 6.6E-31 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15800 faab9e7eca597d9cd59184e3bb0b84b1 233 PANTHER PTHR26402:SF292 2 229 8.5E-91 T 13-09-2016 PMA3_RS09650 4ee97b635116115d4bb926555feb8c2d 512 Pfam PF00324 Amino acid permease 38 477 1.9E-91 T 13-09-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PMA3_RS09650 4ee97b635116115d4bb926555feb8c2d 512 PANTHER PTHR11785 1 511 1.8E-210 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS09650 4ee97b635116115d4bb926555feb8c2d 512 PANTHER PTHR11785:SF25 1 511 1.8E-210 T 13-09-2016 PMA3_RS09650 4ee97b635116115d4bb926555feb8c2d 512 PIRSF PIRSF006060 13 488 1.1E-53 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS09650 4ee97b635116115d4bb926555feb8c2d 512 ProSitePatterns PS00218 Amino acid permeases signature. 62 92 - T 13-09-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PMA3_RS01150 cbe2e27e4dbeaad0ff939693955d4475 151 Pfam PF00588 SpoU rRNA Methylase family 2 142 1.5E-32 T 13-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PMA3_RS01150 cbe2e27e4dbeaad0ff939693955d4475 151 PIRSF PIRSF029256 1 151 3.1E-65 T 13-09-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PMA3_RS01150 cbe2e27e4dbeaad0ff939693955d4475 151 Gene3D G3DSA:3.40.1280.10 1 151 7.7E-66 T 13-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PMA3_RS01150 cbe2e27e4dbeaad0ff939693955d4475 151 SUPERFAMILY SSF75217 1 150 9.81E-45 T 13-09-2016 IPR029028 Alpha/beta knot methyltransferases PMA3_RS01150 cbe2e27e4dbeaad0ff939693955d4475 151 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.89 T 13-09-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PMA3_RS01150 cbe2e27e4dbeaad0ff939693955d4475 151 PANTHER PTHR12029:SF31 1 151 1.4E-72 T 13-09-2016 PMA3_RS01150 cbe2e27e4dbeaad0ff939693955d4475 151 PANTHER PTHR12029 1 151 1.4E-72 T 13-09-2016 PMA3_RS24515 416fcfab9c1ba8ed1e74e74a166e4ff5 292 Pfam PF00551 Formyl transferase 57 158 1.0E-21 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS24515 416fcfab9c1ba8ed1e74e74a166e4ff5 292 SUPERFAMILY SSF53328 55 186 2.22E-32 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS24515 416fcfab9c1ba8ed1e74e74a166e4ff5 292 Gene3D G3DSA:3.40.50.170 53 186 1.7E-32 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS24515 416fcfab9c1ba8ed1e74e74a166e4ff5 292 PANTHER PTHR11138 39 268 7.5E-26 T 13-09-2016 PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 Pfam PF00639 PPIC-type PPIASE domain 269 359 1.3E-27 T 13-09-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 300 321 - T 13-09-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 SUPERFAMILY SSF109998 41 167 2.22E-31 T 13-09-2016 IPR027304 Trigger factor/SurA domain PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 SUPERFAMILY SSF109998 199 234 2.22E-31 T 13-09-2016 IPR027304 Trigger factor/SurA domain PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 Gene3D G3DSA:3.10.50.40 259 386 6.3E-40 T 13-09-2016 PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 PANTHER PTHR10657 1 166 6.5E-132 T 13-09-2016 PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 PANTHER PTHR10657 199 516 6.5E-132 T 13-09-2016 PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 PANTHER PTHR10657:SF11 1 166 6.5E-132 T 13-09-2016 PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 PANTHER PTHR10657:SF11 199 516 6.5E-132 T 13-09-2016 PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 SUPERFAMILY SSF54534 262 362 2.03E-31 T 13-09-2016 PMA3_RS08165 9fb2e650a9a64ba4432708f4ec8b950d 623 Pfam PF13624 SurA N-terminal domain 1 163 1.6E-44 T 13-09-2016 PMA3_RS06105 9eccba7678393343366549d727719d33 208 SUPERFAMILY SSF55186 84 200 8.24E-22 T 13-09-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PMA3_RS06105 9eccba7678393343366549d727719d33 208 Pfam PF01411 tRNA synthetases class II (A) 26 71 1.1E-4 T 13-09-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PMA3_RS06105 9eccba7678393343366549d727719d33 208 PANTHER PTHR11777 25 208 2.0E-32 T 13-09-2016 PMA3_RS06105 9eccba7678393343366549d727719d33 208 SUPERFAMILY SSF50447 15 74 2.79E-11 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS06105 9eccba7678393343366549d727719d33 208 PANTHER PTHR11777:SF7 25 208 2.0E-32 T 13-09-2016 PMA3_RS17280 3a7ec1d69fc5704401ef8e1809299bda 418 PANTHER PTHR11680 1 416 0.0 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS17280 3a7ec1d69fc5704401ef8e1809299bda 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 13-09-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS17280 3a7ec1d69fc5704401ef8e1809299bda 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.237 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS17280 3a7ec1d69fc5704401ef8e1809299bda 418 PIRSF PIRSF000412 1 415 4.4E-169 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS17280 3a7ec1d69fc5704401ef8e1809299bda 418 PANTHER PTHR11680:SF9 1 416 0.0 T 13-09-2016 PMA3_RS17280 3a7ec1d69fc5704401ef8e1809299bda 418 Gene3D G3DSA:3.40.640.10 37 284 3.8E-109 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS17280 3a7ec1d69fc5704401ef8e1809299bda 418 SUPERFAMILY SSF53383 7 417 7.26E-183 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS17280 3a7ec1d69fc5704401ef8e1809299bda 418 Gene3D G3DSA:3.90.1150.10 285 417 4.0E-53 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS17280 3a7ec1d69fc5704401ef8e1809299bda 418 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.1E-182 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS22690 2ed9fd98c74d6443a6f063a6f6f9d0c0 430 Pfam PF14067 LssY C-terminus 215 392 6.1E-51 T 13-09-2016 IPR025902 LssY-like C-terminal domain PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 SUPERFAMILY SSF50692 667 807 1.24E-40 T 13-09-2016 IPR009010 Aspartate decarboxylase-like domain PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615 211 248 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 Pfam PF01568 Molydopterin dinucleotide binding domain 686 801 1.2E-11 T 13-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 Gene3D G3DSA:3.40.228.10 1 108 5.1E-71 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 Gene3D G3DSA:3.40.228.10 153 261 5.1E-71 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 807 0.0 T 13-09-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615 287 382 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615 1 183 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615:SF149 672 808 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615:SF149 287 382 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 Gene3D G3DSA:2.40.40.20 678 808 3.0E-44 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 Gene3D G3DSA:2.40.40.20 603 646 3.0E-44 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615:SF149 211 248 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615:SF149 399 483 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615 399 483 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 Pfam PF00384 Molybdopterin oxidoreductase 2 446 8.6E-28 T 13-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615 574 648 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615:SF149 574 648 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615 672 808 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 Gene3D G3DSA:3.40.50.740 322 471 1.5E-55 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 PANTHER PTHR11615:SF149 1 183 2.0E-247 T 13-09-2016 PMA3_RS13855 5a456b515af431fc5fbb7226c58b17f4 808 SUPERFAMILY SSF53706 1 640 3.14E-222 T 13-09-2016 PMA3_RS05025 e8b39ee7264320cd73ef48b7e0b20b20 252 SMART SM01144 34 226 7.0E-75 T 13-09-2016 IPR005636 DTW PMA3_RS05025 e8b39ee7264320cd73ef48b7e0b20b20 252 PANTHER PTHR21392:SF1 11 243 5.6E-102 T 13-09-2016 PMA3_RS05025 e8b39ee7264320cd73ef48b7e0b20b20 252 Pfam PF03942 DTW domain 36 221 5.9E-44 T 13-09-2016 IPR005636 DTW PMA3_RS05025 e8b39ee7264320cd73ef48b7e0b20b20 252 PANTHER PTHR21392 11 243 5.6E-102 T 13-09-2016 PMA3_RS12160 7375dd750ee628efb3bac85d20a81e6e 173 PANTHER PTHR38593 7 173 9.9E-32 T 13-09-2016 PMA3_RS12160 7375dd750ee628efb3bac85d20a81e6e 173 Pfam PF13628 Domain of unknown function (DUF4142) 26 166 7.2E-38 T 13-09-2016 IPR025419 Domain of unknown function DUF4142 PMA3_RS12160 7375dd750ee628efb3bac85d20a81e6e 173 PANTHER PTHR38593:SF2 7 173 9.9E-32 T 13-09-2016 PMA3_RS27460 f503df9d0dee9d3b218c01d60422fb8f 233 Gene3D G3DSA:3.90.1550.10 5 219 4.9E-51 T 13-09-2016 PMA3_RS27460 f503df9d0dee9d3b218c01d60422fb8f 233 SUPERFAMILY SSF55681 5 227 7.29E-45 T 13-09-2016 PMA3_RS22380 9ecbfd82ddabc626d212ccbf2a943352 394 PANTHER PTHR23523 1 391 2.5E-114 T 13-09-2016 PMA3_RS22380 9ecbfd82ddabc626d212ccbf2a943352 394 Gene3D G3DSA:1.20.1250.20 14 185 1.6E-11 T 13-09-2016 PMA3_RS22380 9ecbfd82ddabc626d212ccbf2a943352 394 Gene3D G3DSA:1.20.1250.20 209 388 6.4E-19 T 13-09-2016 PMA3_RS22380 9ecbfd82ddabc626d212ccbf2a943352 394 SUPERFAMILY SSF103473 5 392 1.83E-43 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS22380 9ecbfd82ddabc626d212ccbf2a943352 394 Pfam PF07690 Major Facilitator Superfamily 28 346 2.9E-23 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS22380 9ecbfd82ddabc626d212ccbf2a943352 394 PANTHER PTHR23523:SF2 1 391 2.5E-114 T 13-09-2016 PMA3_RS05180 c5b1db05abe2dd4c6d87b77be68f1264 260 PANTHER PTHR18966:SF152 23 253 1.6E-56 T 13-09-2016 PMA3_RS05180 c5b1db05abe2dd4c6d87b77be68f1264 260 SUPERFAMILY SSF53850 1 253 4.42E-63 T 13-09-2016 PMA3_RS05180 c5b1db05abe2dd4c6d87b77be68f1264 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 13-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PMA3_RS05180 c5b1db05abe2dd4c6d87b77be68f1264 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 252 3.9E-58 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS05180 c5b1db05abe2dd4c6d87b77be68f1264 260 Gene3D G3DSA:3.40.190.10 117 205 7.3E-24 T 13-09-2016 PMA3_RS05180 c5b1db05abe2dd4c6d87b77be68f1264 260 SMART SM00062 27 254 2.5E-62 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS05180 c5b1db05abe2dd4c6d87b77be68f1264 260 Gene3D G3DSA:3.40.190.10 25 113 1.6E-39 T 13-09-2016 PMA3_RS05180 c5b1db05abe2dd4c6d87b77be68f1264 260 Gene3D G3DSA:3.40.190.10 213 252 1.6E-39 T 13-09-2016 PMA3_RS05180 c5b1db05abe2dd4c6d87b77be68f1264 260 PANTHER PTHR18966 23 253 1.6E-56 T 13-09-2016 PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 PANTHER PTHR30146:SF27 11 336 1.5E-161 T 13-09-2016 PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 Gene3D G3DSA:3.40.50.2300 65 184 1.5E-42 T 13-09-2016 PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 14 32 - T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 59 4.6E-13 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 PANTHER PTHR30146 11 336 1.5E-161 T 13-09-2016 PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 Gene3D G3DSA:1.10.260.40 12 64 2.5E-19 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 SUPERFAMILY SSF47413 11 70 3.94E-13 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 Gene3D G3DSA:3.40.50.2300 185 315 1.4E-18 T 13-09-2016 PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 72 265 2.1E-17 T 13-09-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 SMART SM00354 11 82 4.5E-26 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS15835 9e6c2beac0b4ef01f824531b779470de 341 SUPERFAMILY SSF53822 69 322 6.48E-57 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 PANTHER PTHR24322 162 194 1.1E-57 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 255 1.6E-83 T 13-09-2016 PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 PIRSF PIRSF000094 1 263 9.2E-111 T 13-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 PANTHER PTHR24322:SF317 11 146 1.1E-57 T 13-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 Gene3D G3DSA:3.40.50.720 2 255 8.2E-63 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 PANTHER PTHR24322:SF317 162 194 1.1E-57 T 13-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 PANTHER PTHR24322 11 146 1.1E-57 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15425 86edb0aef7026162ce14cd62a9d632d9 264 SUPERFAMILY SSF51735 6 255 2.4E-61 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26395 089cf7f177e5c9deb8d8eebc5198588e 478 PANTHER PTHR11785:SF399 16 462 4.0E-240 T 13-09-2016 PMA3_RS26395 089cf7f177e5c9deb8d8eebc5198588e 478 ProSitePatterns PS00218 Amino acid permeases signature. 49 80 - T 13-09-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PMA3_RS26395 089cf7f177e5c9deb8d8eebc5198588e 478 PIRSF PIRSF006060 1 475 2.8E-74 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS26395 089cf7f177e5c9deb8d8eebc5198588e 478 Pfam PF00324 Amino acid permease 24 463 1.7E-118 T 13-09-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PMA3_RS26395 089cf7f177e5c9deb8d8eebc5198588e 478 PANTHER PTHR11785 16 462 4.0E-240 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS30205 a20b02590296abca4ce4f00cae9ac093 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 270 30.548 T 13-09-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS30205 a20b02590296abca4ce4f00cae9ac093 273 PANTHER PTHR21089:SF2 1 273 8.2E-139 T 13-09-2016 PMA3_RS30205 a20b02590296abca4ce4f00cae9ac093 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 87 7.5E-22 T 13-09-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS30205 a20b02590296abca4ce4f00cae9ac093 273 PANTHER PTHR21089 1 273 8.2E-139 T 13-09-2016 PMA3_RS30205 a20b02590296abca4ce4f00cae9ac093 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 271 1.5E-75 T 13-09-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PMA3_RS30205 a20b02590296abca4ce4f00cae9ac093 273 SUPERFAMILY SSF53223 1 100 5.53E-28 T 13-09-2016 PMA3_RS30205 a20b02590296abca4ce4f00cae9ac093 273 Gene3D G3DSA:3.40.50.720 106 245 1.7E-43 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30205 a20b02590296abca4ce4f00cae9ac093 273 SUPERFAMILY SSF51735 101 270 9.39E-41 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30205 a20b02590296abca4ce4f00cae9ac093 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 191 8.1E-10 T 13-09-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PMA3_RS30205 a20b02590296abca4ce4f00cae9ac093 273 Gene3D G3DSA:3.40.192.10 1 105 2.1E-33 T 13-09-2016 PMA3_RS07645 8bcf3343169580e37d8544d044bacf19 358 Gene3D G3DSA:3.20.20.70 11 351 3.0E-147 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS07645 8bcf3343169580e37d8544d044bacf19 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 349 7.5E-150 T 13-09-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS07645 8bcf3343169580e37d8544d044bacf19 358 SUPERFAMILY SSF51569 8 349 1.56E-134 T 13-09-2016 PMA3_RS07645 8bcf3343169580e37d8544d044bacf19 358 PANTHER PTHR21225 6 350 7.0E-215 T 13-09-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS07645 8bcf3343169580e37d8544d044bacf19 358 PIRSF PIRSF001361 2 355 7.1E-157 T 13-09-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS07645 8bcf3343169580e37d8544d044bacf19 358 Pfam PF00793 DAHP synthetase I family 45 340 2.7E-93 T 13-09-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PMA3_RS01280 055f2e9e5ead406c87cc4bd65253361c 283 SUPERFAMILY SSF161098 88 271 6.8E-42 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01280 055f2e9e5ead406c87cc4bd65253361c 283 PANTHER PTHR30177 6 283 8.0E-172 T 13-09-2016 PMA3_RS01280 055f2e9e5ead406c87cc4bd65253361c 283 PANTHER PTHR30177:SF10 6 283 8.0E-172 T 13-09-2016 PMA3_RS01280 055f2e9e5ead406c87cc4bd65253361c 283 Gene3D G3DSA:1.10.3720.10 86 270 7.5E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01280 055f2e9e5ead406c87cc4bd65253361c 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 268 5.2E-25 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS10140 00fd292924cc6d37d611f80ea5475de3 404 SUPERFAMILY SSF103473 13 401 6.54E-31 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS10140 00fd292924cc6d37d611f80ea5475de3 404 PANTHER PTHR23547:SF1 1 401 1.1E-179 T 13-09-2016 PMA3_RS10140 00fd292924cc6d37d611f80ea5475de3 404 Gene3D G3DSA:1.20.1250.20 12 201 1.1E-13 T 13-09-2016 PMA3_RS10140 00fd292924cc6d37d611f80ea5475de3 404 Gene3D G3DSA:1.20.1250.20 220 402 1.4E-12 T 13-09-2016 PMA3_RS10140 00fd292924cc6d37d611f80ea5475de3 404 PANTHER PTHR23547 1 401 1.1E-179 T 13-09-2016 PMA3_RS10140 00fd292924cc6d37d611f80ea5475de3 404 Pfam PF07690 Major Facilitator Superfamily 21 342 5.7E-17 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS06390 68214e3a45d1f9b826d8fac9587d51d3 107 SUPERFAMILY SSF54913 1 100 2.33E-26 T 13-09-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PMA3_RS06390 68214e3a45d1f9b826d8fac9587d51d3 107 Pfam PF02641 Uncharacterized ACR, COG1993 8 84 6.2E-16 T 13-09-2016 IPR003793 Domain of unknown function DUF190 PMA3_RS06390 68214e3a45d1f9b826d8fac9587d51d3 107 Gene3D G3DSA:3.30.70.120 1 105 1.6E-27 T 13-09-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PMA3_RS22620 a0cd06ee4a5e82368b94f7a1424560ba 271 PANTHER PTHR30151 41 267 4.6E-48 T 13-09-2016 PMA3_RS22620 a0cd06ee4a5e82368b94f7a1424560ba 271 Gene3D G3DSA:1.10.3720.10 68 262 3.9E-22 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS22620 a0cd06ee4a5e82368b94f7a1424560ba 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 261 1.8E-17 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS22620 a0cd06ee4a5e82368b94f7a1424560ba 271 PANTHER PTHR30151:SF0 41 267 4.6E-48 T 13-09-2016 PMA3_RS22620 a0cd06ee4a5e82368b94f7a1424560ba 271 SUPERFAMILY SSF161098 70 257 1.7E-28 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS18745 eba792616cfdf13e4b2e629f0b5de62b 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 534 612 3.4E-22 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS18745 eba792616cfdf13e4b2e629f0b5de62b 650 Pfam PF00501 AMP-binding enzyme 99 525 1.7E-69 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS18745 eba792616cfdf13e4b2e629f0b5de62b 650 PANTHER PTHR24095:SF184 30 642 4.3E-257 T 13-09-2016 PMA3_RS18745 eba792616cfdf13e4b2e629f0b5de62b 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 267 278 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS18745 eba792616cfdf13e4b2e629f0b5de62b 650 Gene3D G3DSA:3.30.300.30 524 625 6.9E-25 T 13-09-2016 PMA3_RS18745 eba792616cfdf13e4b2e629f0b5de62b 650 Gene3D G3DSA:3.40.50.980 273 428 6.9E-23 T 13-09-2016 PMA3_RS18745 eba792616cfdf13e4b2e629f0b5de62b 650 Gene3D G3DSA:3.40.50.980 89 272 5.6E-40 T 13-09-2016 PMA3_RS18745 eba792616cfdf13e4b2e629f0b5de62b 650 SUPERFAMILY SSF56801 19 632 3.01E-156 T 13-09-2016 PMA3_RS18745 eba792616cfdf13e4b2e629f0b5de62b 650 Gene3D G3DSA:2.30.38.10 445 519 1.1E-5 T 13-09-2016 PMA3_RS18745 eba792616cfdf13e4b2e629f0b5de62b 650 PANTHER PTHR24095 30 642 4.3E-257 T 13-09-2016 PMA3_RS13935 797e5ba8b19134ea9595547bbf4c878a 286 Pfam PF00034 Cytochrome c 46 124 8.7E-10 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13935 797e5ba8b19134ea9595547bbf4c878a 286 Pfam PF00034 Cytochrome c 179 284 9.9E-8 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13935 797e5ba8b19134ea9595547bbf4c878a 286 Gene3D G3DSA:1.10.760.10 20 123 8.4E-25 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13935 797e5ba8b19134ea9595547bbf4c878a 286 SUPERFAMILY SSF46626 33 137 1.09E-17 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13935 797e5ba8b19134ea9595547bbf4c878a 286 Gene3D G3DSA:1.10.760.10 179 285 1.1E-11 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13935 797e5ba8b19134ea9595547bbf4c878a 286 SUPERFAMILY SSF46626 176 285 3.78E-13 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS00605 5659f78f32aec5914e5e3cafe2a939ad 334 SMART SM00342 248 330 2.1E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS00605 5659f78f32aec5914e5e3cafe2a939ad 334 SUPERFAMILY SSF46689 284 332 2.11E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS00605 5659f78f32aec5914e5e3cafe2a939ad 334 PANTHER PTHR11019 232 331 3.1E-29 T 13-09-2016 PMA3_RS00605 5659f78f32aec5914e5e3cafe2a939ad 334 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 203 5.8E-49 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS00605 5659f78f32aec5914e5e3cafe2a939ad 334 PANTHER PTHR11019:SF52 232 331 3.1E-29 T 13-09-2016 PMA3_RS00605 5659f78f32aec5914e5e3cafe2a939ad 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 7.2E-7 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS00605 5659f78f32aec5914e5e3cafe2a939ad 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 7.2E-7 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS00605 5659f78f32aec5914e5e3cafe2a939ad 334 Gene3D G3DSA:1.10.10.60 286 331 1.8E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS00605 5659f78f32aec5914e5e3cafe2a939ad 334 Pfam PF12833 Helix-turn-helix domain 254 331 5.0E-18 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS12570 7fc80f27b5f95c8f1c8ac3919124acbe 272 Gene3D G3DSA:3.40.50.1820 9 268 3.4E-48 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS12570 7fc80f27b5f95c8f1c8ac3919124acbe 272 PANTHER PTHR10992:SF771 10 269 2.5E-39 T 13-09-2016 PMA3_RS12570 7fc80f27b5f95c8f1c8ac3919124acbe 272 SUPERFAMILY SSF53474 6 268 5.17E-49 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS12570 7fc80f27b5f95c8f1c8ac3919124acbe 272 Pfam PF12697 Alpha/beta hydrolase family 33 254 7.9E-18 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS12570 7fc80f27b5f95c8f1c8ac3919124acbe 272 PANTHER PTHR10992 10 269 2.5E-39 T 13-09-2016 PMA3_RS07255 9e6ea8c1121e2c026a695bc343336fe6 337 PANTHER PTHR31438:SF1 113 337 2.6E-84 T 13-09-2016 PMA3_RS07255 9e6ea8c1121e2c026a695bc343336fe6 337 Gene3D G3DSA:3.40.630.30 145 336 4.2E-71 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS07255 9e6ea8c1121e2c026a695bc343336fe6 337 SMART SM01006 167 214 7.0E-18 T 13-09-2016 IPR019432 Siderophore biosynthesis protein, conserved domain PMA3_RS07255 9e6ea8c1121e2c026a695bc343336fe6 337 SUPERFAMILY SSF55729 136 329 2.47E-63 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS07255 9e6ea8c1121e2c026a695bc343336fe6 337 Pfam PF13523 Acetyltransferase (GNAT) domain 170 315 2.0E-54 T 13-09-2016 PMA3_RS07255 9e6ea8c1121e2c026a695bc343336fe6 337 PANTHER PTHR31438 113 337 2.6E-84 T 13-09-2016 PMA3_RS11815 abc2ac7518b5a4b5066e5b3b2728b94c 291 PANTHER PTHR13707:SF34 1 256 2.9E-53 T 13-09-2016 PMA3_RS11815 abc2ac7518b5a4b5066e5b3b2728b94c 291 Pfam PF01144 Coenzyme A transferase 6 223 6.8E-37 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS11815 abc2ac7518b5a4b5066e5b3b2728b94c 291 SUPERFAMILY SSF100950 2 275 6.51E-73 T 13-09-2016 PMA3_RS11815 abc2ac7518b5a4b5066e5b3b2728b94c 291 PANTHER PTHR13707 1 256 2.9E-53 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS11815 abc2ac7518b5a4b5066e5b3b2728b94c 291 Gene3D G3DSA:3.40.1080.10 155 281 1.3E-76 T 13-09-2016 PMA3_RS11815 abc2ac7518b5a4b5066e5b3b2728b94c 291 Gene3D G3DSA:3.40.1080.10 2 116 1.3E-76 T 13-09-2016 PMA3_RS11815 abc2ac7518b5a4b5066e5b3b2728b94c 291 SMART SM00882 4 225 2.1E-36 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS16350 db5e18acdf277a16250527267142733b 167 PANTHER PTHR30154:SF27 1 161 8.9E-50 T 13-09-2016 PMA3_RS16350 db5e18acdf277a16250527267142733b 167 PANTHER PTHR30154 1 161 8.9E-50 T 13-09-2016 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 2 283 37.851 T 13-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 Gene3D G3DSA:3.90.226.10 20 282 1.5E-70 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 15 283 1.1E-130 T 13-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 Pfam PF01039 Carboxyl transferase domain 99 242 1.8E-17 T 13-09-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 PANTHER PTHR22855 3 288 3.3E-163 T 13-09-2016 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 7.5E-38 T 13-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 7.5E-38 T 13-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 7.5E-38 T 13-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 7.5E-38 T 13-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 7.5E-38 T 13-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 PANTHER PTHR22855:SF17 3 288 3.3E-163 T 13-09-2016 PMA3_RS09060 a5a89821c547a301aee2180c71f9eae1 306 SUPERFAMILY SSF52096 27 284 1.06E-85 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS12330 ee2bfa7a25cdb266eba14c6169cef26d 129 Gene3D G3DSA:3.30.1330.40 13 128 8.4E-37 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS12330 ee2bfa7a25cdb266eba14c6169cef26d 129 SUPERFAMILY SSF55298 2 126 4.71E-37 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS12330 ee2bfa7a25cdb266eba14c6169cef26d 129 PANTHER PTHR11803 19 129 1.9E-37 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS12330 ee2bfa7a25cdb266eba14c6169cef26d 129 Pfam PF01042 Endoribonuclease L-PSP 19 125 2.0E-29 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS06960 941830be624e285d5fe03db7f71d9b44 306 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 302 42.692 T 13-09-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 PMA3_RS06960 941830be624e285d5fe03db7f71d9b44 306 PANTHER PTHR38103:SF1 2 305 1.7E-145 T 13-09-2016 PMA3_RS06960 941830be624e285d5fe03db7f71d9b44 306 PANTHER PTHR38103 2 305 1.7E-145 T 13-09-2016 PMA3_RS06960 941830be624e285d5fe03db7f71d9b44 306 Pfam PF04381 Putative exonuclease, RdgC 1 300 1.7E-114 T 13-09-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 PMA3_RS04475 1e1602ee369bfbd66a5018155adf1d0b 116 PANTHER PTHR15680 1 115 3.9E-53 T 13-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04475 1e1602ee369bfbd66a5018155adf1d0b 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 114 1.2E-49 T 13-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04475 1e1602ee369bfbd66a5018155adf1d0b 116 PIRSF PIRSF002191 1 116 5.8E-50 T 13-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04475 1e1602ee369bfbd66a5018155adf1d0b 116 SUPERFAMILY SSF50104 2 115 6.72E-45 T 13-09-2016 IPR008991 Translation protein SH3-like domain PMA3_RS04475 1e1602ee369bfbd66a5018155adf1d0b 116 PRINTS PR00061 Ribosomal protein L19 signature 35 64 6.9E-39 T 13-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04475 1e1602ee369bfbd66a5018155adf1d0b 116 PRINTS PR00061 Ribosomal protein L19 signature 5 34 6.9E-39 T 13-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04475 1e1602ee369bfbd66a5018155adf1d0b 116 PRINTS PR00061 Ribosomal protein L19 signature 89 114 6.9E-39 T 13-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04475 1e1602ee369bfbd66a5018155adf1d0b 116 Pfam PF01245 Ribosomal protein L19 5 114 7.6E-49 T 13-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04475 1e1602ee369bfbd66a5018155adf1d0b 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 13-09-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04475 1e1602ee369bfbd66a5018155adf1d0b 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 29.772 T 13-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS01640 c2df6818cc3616a2bd5cdff44ecba211 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 146 162 - T 13-09-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 PMA3_RS01640 c2df6818cc3616a2bd5cdff44ecba211 514 Pfam PF00221 Aromatic amino acid lyase 16 480 1.2E-157 T 13-09-2016 IPR001106 Aromatic amino acid lyase PMA3_RS01640 c2df6818cc3616a2bd5cdff44ecba211 514 SUPERFAMILY SSF48557 7 510 6.67E-167 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS01640 c2df6818cc3616a2bd5cdff44ecba211 514 PANTHER PTHR10362:SF7 16 511 1.4E-169 T 13-09-2016 PMA3_RS01640 c2df6818cc3616a2bd5cdff44ecba211 514 Gene3D G3DSA:1.20.200.10 205 510 1.0E-99 T 13-09-2016 PMA3_RS01640 c2df6818cc3616a2bd5cdff44ecba211 514 Gene3D G3DSA:1.10.275.10 7 204 5.3E-61 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS01640 c2df6818cc3616a2bd5cdff44ecba211 514 PANTHER PTHR10362 16 511 1.4E-169 T 13-09-2016 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 Gene3D G3DSA:2.102.10.10 42 143 5.0E-22 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 SUPERFAMILY SSF55961 155 406 3.69E-52 T 13-09-2016 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 Pfam PF00355 Rieske [2Fe-2S] domain 43 119 3.3E-17 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 175 197 1.0E-23 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 1.0E-23 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 1.0E-23 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 138 164 1.0E-23 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 1.0E-23 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 1.0E-23 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 174 398 2.6E-40 T 13-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 Gene3D G3DSA:3.90.380.10 144 407 8.7E-18 T 13-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 PANTHER PTHR21266 20 397 8.3E-73 T 13-09-2016 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 SUPERFAMILY SSF50022 7 151 3.27E-43 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10245 62ad935839f1dc72d16ca5667ad8f3c2 411 PANTHER PTHR21266:SF2 20 397 8.3E-73 T 13-09-2016 PMA3_RS16395 5d6b6e5eab467327486e230e97d830ac 636 SUPERFAMILY SSF49503 507 634 1.19E-36 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS16395 5d6b6e5eab467327486e230e97d830ac 636 Gene3D G3DSA:2.130.10.10 105 516 6.2E-179 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS16395 5d6b6e5eab467327486e230e97d830ac 636 Hamap MF_00716 Nitrous-oxide reductase [nosZ]. 2 635 60.425 T 13-09-2016 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084|UniPathway: UPA00652 PMA3_RS16395 5d6b6e5eab467327486e230e97d830ac 636 SUPERFAMILY SSF50974 59 504 1.31E-130 T 13-09-2016 IPR011045 Nitrous oxide reductase, N-terminal PMA3_RS16395 5d6b6e5eab467327486e230e97d830ac 636 PANTHER PTHR22888:SF3 542 634 1.2E-50 T 13-09-2016 PMA3_RS16395 5d6b6e5eab467327486e230e97d830ac 636 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 579 627 - T 13-09-2016 IPR001505 Copper centre Cu(A) GO:0005507 PMA3_RS16395 5d6b6e5eab467327486e230e97d830ac 636 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 41 4.1E-4 T 13-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PMA3_RS16395 5d6b6e5eab467327486e230e97d830ac 636 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 15 634 0.0 T 13-09-2016 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084|UniPathway: UPA00652 PMA3_RS16395 5d6b6e5eab467327486e230e97d830ac 636 PANTHER PTHR22888 542 634 1.2E-50 T 13-09-2016 PMA3_RS16395 5d6b6e5eab467327486e230e97d830ac 636 Gene3D G3DSA:2.60.40.420 527 633 1.9E-49 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS08265 9227dd8b0bf094b6ce96a3486cf4ced6 264 PANTHER PTHR30193:SF30 3 264 2.5E-100 T 13-09-2016 PMA3_RS08265 9227dd8b0bf094b6ce96a3486cf4ced6 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 253 3.4E-14 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS08265 9227dd8b0bf094b6ce96a3486cf4ced6 264 Gene3D G3DSA:1.10.3720.10 7 253 1.8E-55 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS08265 9227dd8b0bf094b6ce96a3486cf4ced6 264 PANTHER PTHR30193 3 264 2.5E-100 T 13-09-2016 PMA3_RS08265 9227dd8b0bf094b6ce96a3486cf4ced6 264 SUPERFAMILY SSF161098 7 254 1.7E-57 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS20860 64dbb1cc50c08f0c15397e181392be60 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 228 4.7E-30 T 13-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PMA3_RS20860 64dbb1cc50c08f0c15397e181392be60 321 SUPERFAMILY SSF51735 3 317 2.84E-66 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20860 64dbb1cc50c08f0c15397e181392be60 321 PANTHER PTHR10366:SF329 3 321 2.7E-102 T 13-09-2016 PMA3_RS20860 64dbb1cc50c08f0c15397e181392be60 321 Gene3D G3DSA:3.40.50.720 3 311 1.4E-57 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20860 64dbb1cc50c08f0c15397e181392be60 321 PANTHER PTHR10366 3 321 2.7E-102 T 13-09-2016 PMA3_RS06225 a489b825b9c12cb6409d0049ac9f6da8 329 SUPERFAMILY SSF52096 216 278 1.22E-40 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS06225 a489b825b9c12cb6409d0049ac9f6da8 329 SUPERFAMILY SSF52096 58 187 1.22E-40 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS06225 a489b825b9c12cb6409d0049ac9f6da8 329 PANTHER PTHR30341 2 326 6.0E-130 T 13-09-2016 PMA3_RS06225 a489b825b9c12cb6409d0049ac9f6da8 329 PANTHER PTHR30341:SF1 2 326 6.0E-130 T 13-09-2016 PMA3_RS06225 a489b825b9c12cb6409d0049ac9f6da8 329 Gene3D G3DSA:3.90.226.10 48 179 2.1E-48 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS06225 a489b825b9c12cb6409d0049ac9f6da8 329 Gene3D G3DSA:3.90.226.10 217 304 2.1E-48 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS06225 a489b825b9c12cb6409d0049ac9f6da8 329 Pfam PF01343 Peptidase family S49 145 284 3.2E-32 T 13-09-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PMA3_RS09890 f425abadb5fb666f1ee950e863f46caf 442 Gene3D G3DSA:1.20.1600.10 25 430 2.7E-65 T 13-09-2016 PMA3_RS09890 f425abadb5fb666f1ee950e863f46caf 442 PANTHER PTHR30026:SF3 5 442 2.0E-66 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS09890 f425abadb5fb666f1ee950e863f46caf 442 Pfam PF02321 Outer membrane efflux protein 250 427 3.5E-26 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS09890 f425abadb5fb666f1ee950e863f46caf 442 Pfam PF02321 Outer membrane efflux protein 38 213 6.7E-23 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS09890 f425abadb5fb666f1ee950e863f46caf 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 31 441 6.3E-77 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS09890 f425abadb5fb666f1ee950e863f46caf 442 SUPERFAMILY SSF56954 6 430 1.7E-72 T 13-09-2016 PMA3_RS09890 f425abadb5fb666f1ee950e863f46caf 442 PANTHER PTHR30026 5 442 2.0E-66 T 13-09-2016 PMA3_RS06685 823d3ecde402b550b3c289f17539450b 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 163 183 1.1E-27 T 13-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) PMA3_RS06685 823d3ecde402b550b3c289f17539450b 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 201 218 1.1E-27 T 13-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) PMA3_RS06685 823d3ecde402b550b3c289f17539450b 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 243 261 1.1E-27 T 13-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) PMA3_RS06685 823d3ecde402b550b3c289f17539450b 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 14 31 1.1E-27 T 13-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) PMA3_RS06685 823d3ecde402b550b3c289f17539450b 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 1.1E-27 T 13-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) PMA3_RS06685 823d3ecde402b550b3c289f17539450b 290 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 13 261 3.7E-66 T 13-09-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region PMA3_RS06685 823d3ecde402b550b3c289f17539450b 290 PANTHER PTHR10907 1 288 1.5E-49 T 13-09-2016 PMA3_RS06685 823d3ecde402b550b3c289f17539450b 290 PANTHER PTHR10907:SF47 1 288 1.5E-49 T 13-09-2016 PMA3_RS06685 823d3ecde402b550b3c289f17539450b 290 Gene3D G3DSA:2.120.10.30 2 289 3.1E-70 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS06685 823d3ecde402b550b3c289f17539450b 290 SUPERFAMILY SSF63829 8 283 1.57E-51 T 13-09-2016 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 Gene3D G3DSA:3.40.50.80 191 317 2.1E-30 T 13-09-2016 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 67 1.7E-7 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 Gene3D G3DSA:2.40.30.10 93 186 5.0E-20 T 13-09-2016 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 SUPERFAMILY SSF54292 2 81 5.93E-17 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 SUPERFAMILY SSF52343 192 317 2.23E-31 T 13-09-2016 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 PANTHER PTHR19370 29 316 4.3E-77 T 13-09-2016 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 PANTHER PTHR19370:SF68 29 316 4.3E-77 T 13-09-2016 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 Gene3D G3DSA:3.10.20.30 2 78 6.2E-17 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 SUPERFAMILY SSF63380 93 186 4.3E-17 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 Pfam PF00175 Oxidoreductase NAD-binding domain 197 295 8.5E-14 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 215 5.2E-10 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 122 134 5.2E-10 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 221 230 5.2E-10 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 284 292 5.2E-10 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS29095 f6172e2d633ade035065bd830c2e262c 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 138 145 5.2E-10 T 13-09-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 SUPERFAMILY SSF160113 356 408 1.44E-7 T 13-09-2016 IPR010879 Domain of unknown function DUF1508 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 17 33 4.7E-17 T 13-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 206 216 4.7E-17 T 13-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 4.7E-17 T 13-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 4.7E-17 T 13-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 335 2.3E-96 T 13-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 PANTHER PTHR10055:SF11 1 339 1.9E-201 T 13-09-2016 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 4 336 36.577 T 13-09-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 Pfam PF00579 tRNA synthetases class I (W and Y) 3 248 2.9E-52 T 13-09-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 Gene3D G3DSA:3.40.50.620 4 215 2.0E-72 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 PANTHER PTHR10055 1 339 1.9E-201 T 13-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 Gene3D G3DSA:1.10.240.10 216 301 2.1E-25 T 13-09-2016 PMA3_RS03990 7a19d723cebbc07ef1ae6a66ee41c4e3 451 SUPERFAMILY SSF52374 6 335 2.07E-76 T 13-09-2016 PMA3_RS14680 fbae5eeaece444facdaf5af5a5894ff8 275 PANTHER PTHR30136 12 267 2.4E-42 T 13-09-2016 PMA3_RS14680 fbae5eeaece444facdaf5af5a5894ff8 275 SUPERFAMILY SSF46785 23 96 1.03E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14680 fbae5eeaece444facdaf5af5a5894ff8 275 Pfam PF09339 IclR helix-turn-helix domain 24 76 7.6E-11 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS14680 fbae5eeaece444facdaf5af5a5894ff8 275 Pfam PF01614 Bacterial transcriptional regulator 146 265 5.8E-7 T 13-09-2016 IPR014757 Transcription regulator IclR, C-terminal PMA3_RS14680 fbae5eeaece444facdaf5af5a5894ff8 275 Gene3D G3DSA:3.30.450.40 91 267 1.2E-29 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS14680 fbae5eeaece444facdaf5af5a5894ff8 275 SMART SM00346 22 113 2.6E-16 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS14680 fbae5eeaece444facdaf5af5a5894ff8 275 Gene3D G3DSA:1.10.10.10 18 90 1.1E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14680 fbae5eeaece444facdaf5af5a5894ff8 275 SUPERFAMILY SSF55781 88 266 4.25E-30 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS19485 f84d1299128cbc82492dfbcb64836d1a 170 Gene3D G3DSA:1.10.10.10 77 160 7.2E-36 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19485 f84d1299128cbc82492dfbcb64836d1a 170 PANTHER PTHR10815 6 158 4.0E-58 T 13-09-2016 PMA3_RS19485 f84d1299128cbc82492dfbcb64836d1a 170 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 1.0E-36 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS19485 f84d1299128cbc82492dfbcb64836d1a 170 SUPERFAMILY SSF53155 4 83 4.9E-17 T 13-09-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PMA3_RS19485 f84d1299128cbc82492dfbcb64836d1a 170 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 4 160 36.876 T 13-09-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 PMA3_RS19485 f84d1299128cbc82492dfbcb64836d1a 170 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 75 6.8E-7 T 13-09-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PMA3_RS19485 f84d1299128cbc82492dfbcb64836d1a 170 SUPERFAMILY SSF46767 77 158 2.88E-32 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS19485 f84d1299128cbc82492dfbcb64836d1a 170 PANTHER PTHR10815:SF5 6 158 4.0E-58 T 13-09-2016 PMA3_RS19485 f84d1299128cbc82492dfbcb64836d1a 170 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 158 3.6E-33 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS17225 39538659ef092d6f697078ca738c1a67 795 Gene3D G3DSA:2.30.30.60 646 694 5.0E-15 T 13-09-2016 PMA3_RS17225 39538659ef092d6f697078ca738c1a67 795 SUPERFAMILY SSF82689 707 792 5.1E-14 T 13-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PMA3_RS17225 39538659ef092d6f697078ca738c1a67 795 PANTHER PTHR30347 111 791 2.1E-115 T 13-09-2016 PMA3_RS17225 39538659ef092d6f697078ca738c1a67 795 Pfam PF00924 Mechanosensitive ion channel 589 787 1.5E-42 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS17225 39538659ef092d6f697078ca738c1a67 795 SUPERFAMILY SSF50182 631 696 6.87E-15 T 13-09-2016 IPR010920 LSM domain PMA3_RS17225 39538659ef092d6f697078ca738c1a67 795 Gene3D G3DSA:3.30.70.100 714 786 5.8E-10 T 13-09-2016 PMA3_RS17225 39538659ef092d6f697078ca738c1a67 795 Pfam PF12607 Protein of unknown function (DUF3772) 143 199 3.1E-16 T 13-09-2016 IPR022249 Domain of unknown function DUF3772 PMA3_RS17225 39538659ef092d6f697078ca738c1a67 795 PANTHER PTHR30347:SF3 111 791 2.1E-115 T 13-09-2016 PMA3_RS17225 39538659ef092d6f697078ca738c1a67 795 SUPERFAMILY SSF82861 546 629 8.89E-14 T 13-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PMA3_RS21095 359c61ab9df67ddd870aaeca92f408f6 351 Pfam PF02277 Phosphoribosyltransferase 11 346 5.5E-131 T 13-09-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PMA3_RS21095 359c61ab9df67ddd870aaeca92f408f6 351 PANTHER PTHR21712 7 349 1.1E-120 T 13-09-2016 PMA3_RS21095 359c61ab9df67ddd870aaeca92f408f6 351 SUPERFAMILY SSF52733 4 346 8.37E-118 T 13-09-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PMA3_RS21095 359c61ab9df67ddd870aaeca92f408f6 351 Gene3D G3DSA:3.40.50.10210 73 329 5.7E-105 T 13-09-2016 PMA3_RS21095 359c61ab9df67ddd870aaeca92f408f6 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 346 1.8E-130 T 13-09-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PMA3_RS21095 359c61ab9df67ddd870aaeca92f408f6 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 348 36.38 T 13-09-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PMA3_RS21095 359c61ab9df67ddd870aaeca92f408f6 351 PANTHER PTHR21712:SF4 7 349 1.1E-120 T 13-09-2016 PMA3_RS21095 359c61ab9df67ddd870aaeca92f408f6 351 Gene3D G3DSA:1.10.1610.10 4 72 5.4E-33 T 13-09-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 SUPERFAMILY SSF54211 565 757 2.12E-33 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 647 666 2.1E-11 T 13-09-2016 PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 66 85 2.1E-11 T 13-09-2016 PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 566 582 2.1E-11 T 13-09-2016 PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 2.1E-11 T 13-09-2016 PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 Pfam PF13654 AAA domain 30 540 3.0E-174 T 13-09-2016 PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 Gene3D G3DSA:3.30.230.10 558 756 2.0E-29 T 13-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 Gene3D G3DSA:3.40.50.300 303 394 6.8E-11 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 Gene3D G3DSA:3.40.50.300 35 97 6.8E-11 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 SUPERFAMILY SSF52540 307 535 1.26E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 SUPERFAMILY SSF52540 35 109 1.26E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 PANTHER PTHR10046:SF46 149 761 1.2E-142 T 13-09-2016 PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 650 752 2.3E-6 T 13-09-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PMA3_RS03130 88abde6e83a22b07dc98913f970b4715 812 PANTHER PTHR10046 149 761 1.2E-142 T 13-09-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 PMA3_RS22850 728e0e1bd979e9a9bd49b083f90fd3ef 252 PANTHER PTHR30373:SF2 1 203 6.1E-42 T 13-09-2016 PMA3_RS22850 728e0e1bd979e9a9bd49b083f90fd3ef 252 PANTHER PTHR30373 1 203 6.1E-42 T 13-09-2016 PMA3_RS22850 728e0e1bd979e9a9bd49b083f90fd3ef 252 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 32 152 1.7E-35 T 13-09-2016 IPR007621 TPM domain PMA3_RS03970 3236771b3d9ab4aed449dfdeb40c91ea 214 Pfam PF00753 Metallo-beta-lactamase superfamily 16 196 1.7E-29 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS03970 3236771b3d9ab4aed449dfdeb40c91ea 214 SMART SM00849 19 196 3.5E-35 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS03970 3236771b3d9ab4aed449dfdeb40c91ea 214 Gene3D G3DSA:3.60.15.10 6 208 8.0E-49 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS03970 3236771b3d9ab4aed449dfdeb40c91ea 214 PANTHER PTHR11935 8 213 1.2E-59 T 13-09-2016 PMA3_RS03970 3236771b3d9ab4aed449dfdeb40c91ea 214 PANTHER PTHR11935:SF8 8 213 1.2E-59 T 13-09-2016 PMA3_RS03970 3236771b3d9ab4aed449dfdeb40c91ea 214 SUPERFAMILY SSF56281 6 213 3.22E-52 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS14340 a220051e8bbacb38f0450a8ccebc7a9f 93 PANTHER PTHR11785:SF24 1 71 6.2E-18 T 13-09-2016 PMA3_RS14340 a220051e8bbacb38f0450a8ccebc7a9f 93 PANTHER PTHR11785 1 71 6.2E-18 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS14340 a220051e8bbacb38f0450a8ccebc7a9f 93 Pfam PF00324 Amino acid permease 4 60 3.1E-10 T 13-09-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 SUPERFAMILY SSF52935 327 479 2.22E-37 T 13-09-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 Gene3D G3DSA:3.20.20.60 170 329 1.7E-93 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 Gene3D G3DSA:3.20.20.60 4 74 1.7E-93 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 PRINTS PR01050 Pyruvate kinase family signature 298 316 1.9E-49 T 13-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 PRINTS PR01050 Pyruvate kinase family signature 248 272 1.9E-49 T 13-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 PRINTS PR01050 Pyruvate kinase family signature 61 77 1.9E-49 T 13-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 PRINTS PR01050 Pyruvate kinase family signature 317 333 1.9E-49 T 13-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 PRINTS PR01050 Pyruvate kinase family signature 273 297 1.9E-49 T 13-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 PRINTS PR01050 Pyruvate kinase family signature 221 247 1.9E-49 T 13-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 PRINTS PR01050 Pyruvate kinase family signature 188 202 1.9E-49 T 13-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 PANTHER PTHR11817:SF17 1 480 3.5E-286 T 13-09-2016 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 4 478 8.7E-158 T 13-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 SUPERFAMILY SSF51621 169 343 4.54E-91 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 SUPERFAMILY SSF51621 2 77 4.54E-91 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 13-09-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 PANTHER PTHR11817 1 480 3.5E-286 T 13-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 476 3.6E-27 T 13-09-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 Pfam PF00224 Pyruvate kinase, barrel domain 4 342 2.3E-121 T 13-09-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 Gene3D G3DSA:2.40.33.10 75 169 1.2E-26 T 13-09-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 SUPERFAMILY SSF50800 72 166 1.19E-23 T 13-09-2016 IPR011037 Pyruvate kinase-like, insert domain PMA3_RS23450 38512ff1c447d7dfd84102d0417e0d06 483 Gene3D G3DSA:3.40.1380.20 330 478 4.8E-37 T 13-09-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 Gene3D G3DSA:3.90.380.10 159 409 3.0E-21 T 13-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 189 412 9.3E-44 T 13-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 SUPERFAMILY SSF50022 24 167 5.63E-43 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 PANTHER PTHR21266:SF2 26 410 1.3E-109 T 13-09-2016 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 70 85 1.1E-28 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 91 111 1.1E-28 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 112 132 1.1E-28 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 1.1E-28 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 40 65 1.1E-28 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 1.1E-28 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 Pfam PF00355 Rieske [2Fe-2S] domain 56 131 3.9E-15 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 SUPERFAMILY SSF55961 168 413 6.2E-53 T 13-09-2016 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 Gene3D G3DSA:2.102.10.10 55 158 9.6E-24 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS27990 48b7138baa8e41f723d7c7a34378f0e5 431 PANTHER PTHR21266 26 410 1.3E-109 T 13-09-2016 PMA3_RS15760 29f56a91fb87e39a5ccd62d81e993411 287 Pfam PF00753 Metallo-beta-lactamase superfamily 13 205 3.4E-18 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15760 29f56a91fb87e39a5ccd62d81e993411 287 PANTHER PTHR11935:SF110 5 282 1.1E-126 T 13-09-2016 PMA3_RS15760 29f56a91fb87e39a5ccd62d81e993411 287 SUPERFAMILY SSF56281 8 286 9.7E-49 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15760 29f56a91fb87e39a5ccd62d81e993411 287 PANTHER PTHR11935 5 282 1.1E-126 T 13-09-2016 PMA3_RS15760 29f56a91fb87e39a5ccd62d81e993411 287 Gene3D G3DSA:3.60.15.10 7 250 1.2E-48 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS15760 29f56a91fb87e39a5ccd62d81e993411 287 SMART SM00849 14 205 2.0E-22 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 Gene3D G3DSA:2.20.200.10 110 150 1.1E-12 T 13-09-2016 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 Gene3D G3DSA:2.20.200.10 324 361 1.1E-12 T 13-09-2016 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 PANTHER PTHR30203:SF3 3 495 5.2E-147 T 13-09-2016 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 Pfam PF02321 Outer membrane efflux protein 289 474 4.5E-22 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 Pfam PF02321 Outer membrane efflux protein 71 263 4.7E-20 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 Gene3D G3DSA:1.20.1600.10 151 323 9.5E-89 T 13-09-2016 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 Gene3D G3DSA:1.20.1600.10 363 476 9.5E-89 T 13-09-2016 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 Gene3D G3DSA:1.20.1600.10 57 97 9.5E-89 T 13-09-2016 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 PANTHER PTHR30203 3 495 5.2E-147 T 13-09-2016 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 SUPERFAMILY SSF56954 62 477 3.01E-94 T 13-09-2016 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 SUPERFAMILY SSF56954 4 25 3.01E-94 T 13-09-2016 PMA3_RS24710 ede3309d96710b08cc9f815dd262aedd 503 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 476 9.8E-109 T 13-09-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 Gene3D G3DSA:3.30.1360.120 6 58 5.2E-56 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 Gene3D G3DSA:3.30.1360.120 148 235 5.2E-56 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 271 364 6.6E-20 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 PIRSF PIRSF006487 1 374 5.1E-80 T 13-09-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 Gene3D G3DSA:3.30.70.1400 59 142 2.1E-33 T 13-09-2016 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 Gene3D G3DSA:2.40.30.110 286 362 3.0E-24 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 SUPERFAMILY SSF101790 280 373 1.47E-25 T 13-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 7 368 2.1E-104 T 13-09-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 PANTHER PTHR13847 1 373 2.3E-205 T 13-09-2016 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 PANTHER PTHR13847:SF209 1 373 2.3E-205 T 13-09-2016 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 SUPERFAMILY SSF103025 5 287 4.55E-91 T 13-09-2016 PMA3_RS23190 843e160d614beb799a6548778c5357f7 374 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 258 1.6E-90 T 13-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal PMA3_RS10990 2e6ffff4b10a439be7cf67f903f725e0 162 Gene3D G3DSA:3.10.450.50 4 155 3.4E-53 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS10990 2e6ffff4b10a439be7cf67f903f725e0 162 SUPERFAMILY SSF54427 3 162 9.64E-55 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS10990 2e6ffff4b10a439be7cf67f903f725e0 162 PANTHER PTHR41534:SF1 1 162 1.3E-87 T 13-09-2016 PMA3_RS10990 2e6ffff4b10a439be7cf67f903f725e0 162 PANTHER PTHR41534 1 162 1.3E-87 T 13-09-2016 PMA3_RS10990 2e6ffff4b10a439be7cf67f903f725e0 162 Pfam PF00866 Ring hydroxylating beta subunit 14 154 1.1E-48 T 13-09-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 PMA3_RS10990 2e6ffff4b10a439be7cf67f903f725e0 162 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 8 162 8.3E-89 T 13-09-2016 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0016708|GO:0055114 PMA3_RS19940 0289b2f17dd2c536a312417224ad01ce 438 Pfam PF03553 Na+/H+ antiporter family 149 432 2.9E-75 T 13-09-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PMA3_RS19940 0289b2f17dd2c536a312417224ad01ce 438 Pfam PF13726 Na+-H+ antiporter family 2 88 1.8E-32 T 13-09-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal PMA3_RS19940 0289b2f17dd2c536a312417224ad01ce 438 PANTHER PTHR37821 1 438 2.5E-194 T 13-09-2016 PMA3_RS29805 2a7a8a8f46d01f8aaf2f6568f7376790 223 Gene3D G3DSA:3.40.630.30 6 205 8.2E-54 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS29805 2a7a8a8f46d01f8aaf2f6568f7376790 223 PANTHER PTHR13256:SF22 1 212 5.6E-72 T 13-09-2016 PMA3_RS29805 2a7a8a8f46d01f8aaf2f6568f7376790 223 Pfam PF13302 Acetyltransferase (GNAT) domain 47 164 1.4E-9 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS29805 2a7a8a8f46d01f8aaf2f6568f7376790 223 PANTHER PTHR13256 1 212 5.6E-72 T 13-09-2016 PMA3_RS29805 2a7a8a8f46d01f8aaf2f6568f7376790 223 SUPERFAMILY SSF55729 15 189 7.69E-34 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS17825 ce8b635bfdae79c7af0ddac3ce6faea5 169 Pfam PF04224 Protein of unknown function, DUF417 17 163 5.0E-29 T 13-09-2016 IPR007339 Protein of unknown function DUF417 PMA3_RS17825 ce8b635bfdae79c7af0ddac3ce6faea5 169 PANTHER PTHR40106:SF1 9 169 7.4E-25 T 13-09-2016 PMA3_RS17825 ce8b635bfdae79c7af0ddac3ce6faea5 169 PANTHER PTHR40106 9 169 7.4E-25 T 13-09-2016 PMA3_RS16245 c0b8d449f7977c34fc0e8f4451435ad5 184 PANTHER PTHR10192:SF18 5 173 1.4E-90 T 13-09-2016 PMA3_RS16245 c0b8d449f7977c34fc0e8f4451435ad5 184 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 2.3E-32 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS16245 c0b8d449f7977c34fc0e8f4451435ad5 184 SMART SM00852 15 159 2.6E-30 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS16245 c0b8d449f7977c34fc0e8f4451435ad5 184 SUPERFAMILY SSF53218 8 168 7.2E-45 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS16245 c0b8d449f7977c34fc0e8f4451435ad5 184 PIRSF PIRSF006443 1 167 1.4E-60 T 13-09-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 PMA3_RS16245 c0b8d449f7977c34fc0e8f4451435ad5 184 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 9 170 2.8E-79 T 13-09-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 PMA3_RS16245 c0b8d449f7977c34fc0e8f4451435ad5 184 PANTHER PTHR10192 5 173 1.4E-90 T 13-09-2016 PMA3_RS16245 c0b8d449f7977c34fc0e8f4451435ad5 184 Gene3D G3DSA:3.40.980.10 7 160 6.3E-48 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS16245 c0b8d449f7977c34fc0e8f4451435ad5 184 Pfam PF00994 Probable molybdopterin binding domain 15 156 1.3E-30 T 13-09-2016 IPR001453 MoaB/Mog domain PMA3_RS08170 63d108e48b2e7638c6bc17f966a472cc 282 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 53 173 5.9E-54 T 13-09-2016 IPR018718 Protein of unknown function DUF2242 PMA3_RS24475 76a7bf633d2719db07a9d0cf25f05e5d 426 Gene3D G3DSA:3.30.470.20 142 321 1.7E-12 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS24475 76a7bf633d2719db07a9d0cf25f05e5d 426 SUPERFAMILY SSF56059 141 315 1.39E-16 T 13-09-2016 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 1.9E-15 T 13-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 PANTHER PTHR23115 1 396 1.1E-255 T 13-09-2016 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 Gene3D G3DSA:2.40.30.10 215 301 1.1E-34 T 13-09-2016 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 Pfam PF00009 Elongation factor Tu GTP binding domain 11 204 5.3E-56 T 13-09-2016 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 397 5.0E-220 T 13-09-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 SUPERFAMILY SSF50465 301 396 8.35E-36 T 13-09-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 58.464 T 13-09-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 SUPERFAMILY SSF52540 8 222 4.87E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 SUPERFAMILY SSF50447 209 304 2.36E-28 T 13-09-2016 IPR009000 Translation protein, beta-barrel domain PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 6.3E-34 T 13-09-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 6.5E-14 T 13-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 Gene3D G3DSA:2.40.30.10 303 396 3.8E-47 T 13-09-2016 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 Gene3D G3DSA:3.40.50.300 4 214 2.7E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.8E-25 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.8E-25 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 9.8E-25 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.8E-25 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.8E-25 T 13-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 PANTHER PTHR23115:SF151 1 396 1.1E-255 T 13-09-2016 PMA3_RS27275 2fe0249f23e42204b394a4cd37d906b9 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-09-2016 IPR031157 Tr-type G domain, conserved site PMA3_RS07685 1325b22d12a021e0e6c95a539d4b1e9b 380 PIRSF PIRSF015557 3 380 5.1E-164 T 13-09-2016 IPR016633 Uncharacterised conserved protein UCP015557 PMA3_RS07685 1325b22d12a021e0e6c95a539d4b1e9b 380 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 8 376 2.5E-160 T 13-09-2016 IPR016633 Uncharacterised conserved protein UCP015557 PMA3_RS07685 1325b22d12a021e0e6c95a539d4b1e9b 380 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 8 376 5.1E-153 T 13-09-2016 IPR016633 Uncharacterised conserved protein UCP015557 PMA3_RS25445 7dc56156b8bc066e5efd5b385c089e17 278 PANTHER PTHR38684 2 276 4.0E-60 T 13-09-2016 PMA3_RS24915 e401986cccea09db1a7231efde44827f 324 Gene3D G3DSA:1.10.3720.10 118 319 1.2E-53 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS24915 e401986cccea09db1a7231efde44827f 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 141 318 1.2E-24 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS24915 e401986cccea09db1a7231efde44827f 324 SUPERFAMILY SSF161098 118 303 1.31E-48 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS24915 e401986cccea09db1a7231efde44827f 324 PANTHER PTHR30614 87 323 1.0E-83 T 13-09-2016 PMA3_RS24915 e401986cccea09db1a7231efde44827f 324 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 117 212 9.1E-29 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS22955 60ce896d2420980778031117c15d4588 210 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 82 1.4E-13 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS22955 60ce896d2420980778031117c15d4588 210 PANTHER PTHR11260 5 201 5.1E-65 T 13-09-2016 PMA3_RS22955 60ce896d2420980778031117c15d4588 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 139 199 4.7E-6 T 13-09-2016 IPR004046 Glutathione S-transferase, C-terminal PMA3_RS22955 60ce896d2420980778031117c15d4588 210 PANTHER PTHR11260:SF253 5 201 5.1E-65 T 13-09-2016 PMA3_RS22955 60ce896d2420980778031117c15d4588 210 SUPERFAMILY SSF47616 82 204 3.06E-29 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS22955 60ce896d2420980778031117c15d4588 210 Gene3D G3DSA:1.20.1050.10 96 203 1.5E-34 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS22955 60ce896d2420980778031117c15d4588 210 Gene3D G3DSA:3.40.30.10 2 95 1.9E-24 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS22955 60ce896d2420980778031117c15d4588 210 SUPERFAMILY SSF52833 4 87 3.07E-21 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 SUPERFAMILY SSF50249 2 63 1.94E-17 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.9E-18 T 13-09-2016 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 SMART SM00278 73 92 0.2 T 13-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 SMART SM00278 108 127 0.0055 T 13-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 SUPERFAMILY SSF47781 66 136 1.14E-22 T 13-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 Pfam PF01330 RuvA N terminal domain 2 62 2.3E-20 T 13-09-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 Gene3D G3DSA:1.10.8.10 159 203 9.1E-21 T 13-09-2016 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.129 T 13-09-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 Gene3D G3DSA:2.40.50.140 2 63 7.8E-27 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 SUPERFAMILY SSF46929 160 203 4.84E-11 T 13-09-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 Gene3D G3DSA:1.10.150.20 68 139 2.2E-30 T 13-09-2016 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 Pfam PF07499 RuvA, C-terminal domain 160 203 1.7E-16 T 13-09-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 202 1.1E-59 T 13-09-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PMA3_RS23265 75c31acac03da605af63b8eff98f2c65 204 PANTHER PTHR33796 2 204 5.2E-78 T 13-09-2016 PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 Pfam PF00226 DnaJ domain 5 66 4.2E-22 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 SUPERFAMILY SSF49493 217 299 2.49E-16 T 13-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 PANTHER PTHR24078:SF190 4 305 3.1E-72 T 13-09-2016 PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 Gene3D G3DSA:1.10.287.110 2 112 1.8E-30 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 PRINTS PR00625 DnaJ domain signature 61 80 7.1E-20 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 PRINTS PR00625 DnaJ domain signature 25 40 7.1E-20 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 PRINTS PR00625 DnaJ domain signature 7 25 7.1E-20 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 PRINTS PR00625 DnaJ domain signature 41 61 7.1E-20 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 PANTHER PTHR24078 4 305 3.1E-72 T 13-09-2016 PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 SMART SM00271 4 61 3.9E-23 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 SUPERFAMILY SSF49493 127 223 1.57E-16 T 13-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 SUPERFAMILY SSF46565 1 100 2.88E-29 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 Gene3D G3DSA:2.60.260.20 213 290 6.6E-16 T 13-09-2016 PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 Pfam PF01556 DnaJ C terminal domain 132 289 5.7E-33 T 13-09-2016 IPR002939 Chaperone DnaJ, C-terminal PMA3_RS02360 f546e90e6e738015dbd0d531902def04 315 Gene3D G3DSA:2.60.260.20 116 209 2.0E-17 T 13-09-2016 PMA3_RS20465 cf4cf2ac60285e04b07e87dca887e912 331 SUPERFAMILY SSF53474 50 313 6.91E-31 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS20465 cf4cf2ac60285e04b07e87dca887e912 331 Gene3D G3DSA:3.40.50.1820 39 312 5.5E-35 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS20465 cf4cf2ac60285e04b07e87dca887e912 331 Pfam PF12697 Alpha/beta hydrolase family 58 265 5.3E-11 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS20465 cf4cf2ac60285e04b07e87dca887e912 331 PANTHER PTHR11005 54 151 9.2E-18 T 13-09-2016 PMA3_RS01935 d3ef0219fdd79b8b5c156a3e5a68cd74 271 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 202 257 7.0E-25 T 13-09-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 PMA3_RS01935 d3ef0219fdd79b8b5c156a3e5a68cd74 271 PANTHER PTHR12905:SF7 49 271 1.2E-78 T 13-09-2016 PMA3_RS01935 d3ef0219fdd79b8b5c156a3e5a68cd74 271 SUPERFAMILY SSF56300 15 266 9.64E-59 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS01935 d3ef0219fdd79b8b5c156a3e5a68cd74 271 PANTHER PTHR12905 15 33 1.2E-78 T 13-09-2016 PMA3_RS01935 d3ef0219fdd79b8b5c156a3e5a68cd74 271 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 257 39.27 T 13-09-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 PMA3_RS01935 d3ef0219fdd79b8b5c156a3e5a68cd74 271 Gene3D G3DSA:3.60.21.10 15 251 9.8E-33 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS01935 d3ef0219fdd79b8b5c156a3e5a68cd74 271 PANTHER PTHR12905:SF7 15 33 1.2E-78 T 13-09-2016 PMA3_RS01935 d3ef0219fdd79b8b5c156a3e5a68cd74 271 PANTHER PTHR12905 49 271 1.2E-78 T 13-09-2016 PMA3_RS01935 d3ef0219fdd79b8b5c156a3e5a68cd74 271 Pfam PF00149 Calcineurin-like phosphoesterase 16 202 4.2E-12 T 13-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PMA3_RS16335 b10be23c5b918c8fe712543a45a0a0b6 152 PANTHER PTHR30154 1 148 1.6E-47 T 13-09-2016 PMA3_RS16335 b10be23c5b918c8fe712543a45a0a0b6 152 PANTHER PTHR30154:SF21 1 148 1.6E-47 T 13-09-2016 PMA3_RS02365 7c66356fc33707464c4346a08ed2567f 101 Pfam PF13591 MerR HTH family regulatory protein 10 93 6.1E-26 T 13-09-2016 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 SUPERFAMILY SSF51338 421 476 1.29E-6 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 426 439 3.5E-34 T 13-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 400 415 3.5E-34 T 13-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 3.5E-34 T 13-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 3.5E-34 T 13-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 PANTHER PTHR22642:SF7 23 295 2.3E-263 T 13-09-2016 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 PANTHER PTHR22642:SF7 319 500 2.3E-263 T 13-09-2016 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 4.5E-56 T 13-09-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 SUPERFAMILY SSF51338 2 176 1.61E-62 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 ProSitePatterns PS00145 Urease active site. 316 332 - T 13-09-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 13-09-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 Gene3D G3DSA:2.30.40.10 67 142 1.6E-14 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 PANTHER PTHR22642 23 295 2.3E-263 T 13-09-2016 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 PANTHER PTHR22642 319 500 2.3E-263 T 13-09-2016 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 Gene3D G3DSA:3.20.20.140 143 428 1.1E-215 T 13-09-2016 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 Gene3D G3DSA:3.20.20.140 487 564 1.1E-215 T 13-09-2016 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 Hamap MF_01953 Urease subunit alpha [ureC]. 1 566 57.974 T 13-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 Pfam PF01979 Amidohydrolase family 124 449 3.3E-80 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 SUPERFAMILY SSF51556 128 431 2.16E-206 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 SUPERFAMILY SSF51556 480 566 2.16E-206 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS02385 d1f46717c95b83c493b20dee7e011609 566 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 566 3.5E-301 T 13-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PMA3_RS28415 650704c7efa50cb2ef4f0f2512105dd8 121 SMART SM00448 2 115 1.9E-38 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS28415 650704c7efa50cb2ef4f0f2512105dd8 121 Pfam PF00072 Response regulator receiver domain 4 115 7.4E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS28415 650704c7efa50cb2ef4f0f2512105dd8 121 PANTHER PTHR26402 2 121 1.9E-40 T 13-09-2016 PMA3_RS28415 650704c7efa50cb2ef4f0f2512105dd8 121 Gene3D G3DSA:3.40.50.2300 1 120 4.1E-39 T 13-09-2016 PMA3_RS28415 650704c7efa50cb2ef4f0f2512105dd8 121 SUPERFAMILY SSF52172 1 120 1.71E-38 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS03695 4014a99adfaba5ecd387618d196f0b1e 472 PANTHER PTHR41983 1 460 0.0 T 13-09-2016 PMA3_RS03695 4014a99adfaba5ecd387618d196f0b1e 472 Pfam PF02667 Short chain fatty acid transporter 12 456 3.3E-87 T 13-09-2016 IPR006160 Short chain fatty acid transporter AtoE PMA3_RS03695 4014a99adfaba5ecd387618d196f0b1e 472 PANTHER PTHR41983:SF1 1 460 0.0 T 13-09-2016 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 Gene3D G3DSA:1.10.10.10 418 487 3.3E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 SMART SM00086 340 380 0.0032 T 13-09-2016 IPR001610 PAC motif PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 SMART SM00086 215 255 320.0 T 13-09-2016 IPR001610 PAC motif PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 SUPERFAMILY SSF55785 10 135 5.06E-9 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 SUPERFAMILY SSF55785 138 251 7.5E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 SUPERFAMILY SSF55785 255 378 1.92E-19 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 Gene3D G3DSA:3.30.450.20 255 378 1.9E-19 T 13-09-2016 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 261 5.5E-10 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 263 387 1.7E-15 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 SMART SM00091 13 84 3.5 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 SMART SM00091 267 334 0.042 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 SMART SM00091 142 212 0.0083 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 Gene3D G3DSA:3.30.450.20 174 247 6.1E-8 T 13-09-2016 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 SUPERFAMILY SSF46894 420 488 1.22E-19 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 Pfam PF13426 PAS domain 277 379 1.3E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 Gene3D G3DSA:3.30.450.20 11 127 2.2E-10 T 13-09-2016 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 Gene3D G3DSA:3.30.450.20 128 173 5.6E-5 T 13-09-2016 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 Pfam PF00196 Bacterial regulatory proteins, luxR family 428 482 4.8E-17 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 PANTHER PTHR26402 386 487 8.6E-18 T 13-09-2016 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 428 442 6.3E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 442 458 6.3E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 458 470 6.3E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 Pfam PF13188 PAS domain 14 59 4.5E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 Pfam PF13188 PAS domain 142 197 3.9E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 SMART SM00421 425 482 3.6E-23 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15555 1d0e94b4bddd6f1dc9f627ee5706e398 498 PANTHER PTHR26402:SF151 386 487 8.6E-18 T 13-09-2016 PMA3_RS11390 1a01d230e7872f16eb197369aa3b92f6 153 SUPERFAMILY SSF55724 1 143 7.85E-41 T 13-09-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich PMA3_RS11390 1a01d230e7872f16eb197369aa3b92f6 153 Pfam PF08786 Domain of unknown function (DUF1795) 7 138 1.0E-34 T 13-09-2016 IPR014894 Protein DcrB PMA3_RS11390 1a01d230e7872f16eb197369aa3b92f6 153 Gene3D G3DSA:3.40.1000.10 1 144 2.3E-48 T 13-09-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich PMA3_RS29610 fb0c0d3448eec4fc8f8b534ef6c90654 466 Pfam PF08668 HDOD domain 194 394 6.3E-48 T 13-09-2016 IPR013976 Metal-dependent hydrolase HDOD PMA3_RS29610 fb0c0d3448eec4fc8f8b534ef6c90654 466 Pfam PF04073 Aminoacyl-tRNA editing domain 30 140 7.5E-11 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS29610 fb0c0d3448eec4fc8f8b534ef6c90654 466 PANTHER PTHR33525:SF3 89 466 5.8E-89 T 13-09-2016 PMA3_RS29610 fb0c0d3448eec4fc8f8b534ef6c90654 466 Gene3D G3DSA:3.90.960.10 29 145 9.9E-5 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS29610 fb0c0d3448eec4fc8f8b534ef6c90654 466 SUPERFAMILY SSF109604 179 451 8.58E-63 T 13-09-2016 PMA3_RS29610 fb0c0d3448eec4fc8f8b534ef6c90654 466 PIRSF PIRSF036888 1 465 2.7E-258 T 13-09-2016 IPR014627 Uncharacterised conserved protein UCP036888, signal transduction HD-GYP-like, PA5346 type PMA3_RS29610 fb0c0d3448eec4fc8f8b534ef6c90654 466 PANTHER PTHR33525 89 466 5.8E-89 T 13-09-2016 PMA3_RS29610 fb0c0d3448eec4fc8f8b534ef6c90654 466 SUPERFAMILY SSF55826 21 143 6.15E-11 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS29610 fb0c0d3448eec4fc8f8b534ef6c90654 466 Gene3D G3DSA:1.10.3150.10 174 451 5.2E-77 T 13-09-2016 IPR013976 Metal-dependent hydrolase HDOD PMA3_RS19080 5ea7786d2bea7d18fc86630a9666c7e5 463 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 3 462 2.1E-249 T 13-09-2016 IPR017715 Putative aminophosphonate oxidoreductase PMA3_RS19080 5ea7786d2bea7d18fc86630a9666c7e5 463 PANTHER PTHR13847:SF208 1 450 2.6E-238 T 13-09-2016 PMA3_RS19080 5ea7786d2bea7d18fc86630a9666c7e5 463 SUPERFAMILY SSF51905 176 303 5.61E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19080 5ea7786d2bea7d18fc86630a9666c7e5 463 SUPERFAMILY SSF51905 14 121 5.61E-37 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19080 5ea7786d2bea7d18fc86630a9666c7e5 463 Pfam PF01266 FAD dependent oxidoreductase 28 390 7.3E-49 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS19080 5ea7786d2bea7d18fc86630a9666c7e5 463 PANTHER PTHR13847 1 450 2.6E-238 T 13-09-2016 PMA3_RS19080 5ea7786d2bea7d18fc86630a9666c7e5 463 Gene3D G3DSA:3.50.50.60 16 118 1.2E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19080 5ea7786d2bea7d18fc86630a9666c7e5 463 Gene3D G3DSA:3.50.50.60 353 400 1.2E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19080 5ea7786d2bea7d18fc86630a9666c7e5 463 Gene3D G3DSA:3.50.50.60 172 251 1.2E-44 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10380 8784c43964f674c7ddf30210ec7760c6 350 PANTHER PTHR37418:SF2 163 322 6.0E-31 T 13-09-2016 PMA3_RS10380 8784c43964f674c7ddf30210ec7760c6 350 Gene3D G3DSA:3.20.20.70 13 320 1.4E-80 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS10380 8784c43964f674c7ddf30210ec7760c6 350 PANTHER PTHR37418 13 141 6.0E-31 T 13-09-2016 PMA3_RS10380 8784c43964f674c7ddf30210ec7760c6 350 Pfam PF05853 beta-keto acid cleavage enzyme 15 318 2.5E-62 T 13-09-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 PMA3_RS10380 8784c43964f674c7ddf30210ec7760c6 350 PANTHER PTHR37418 163 322 6.0E-31 T 13-09-2016 PMA3_RS10380 8784c43964f674c7ddf30210ec7760c6 350 PANTHER PTHR37418:SF2 13 141 6.0E-31 T 13-09-2016 PMA3_RS11880 94fb2024c018aaf979d49c977a34e382 448 Gene3D G3DSA:2.50.20.10 335 440 4.9E-31 T 13-09-2016 PMA3_RS11880 94fb2024c018aaf979d49c977a34e382 448 Gene3D G3DSA:2.50.20.10 155 302 4.9E-31 T 13-09-2016 PMA3_RS11880 94fb2024c018aaf979d49c977a34e382 448 Pfam PF07044 Protein of unknown function (DUF1329) 78 443 1.8E-117 T 13-09-2016 IPR010752 Protein of unknown function DUF1329 PMA3_RS06210 9de17cb6b069233d17494be5ac0b85a3 1089 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 2.2E-167 T 13-09-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PMA3_RS06210 9de17cb6b069233d17494be5ac0b85a3 1089 SUPERFAMILY SSF50249 40 123 5.45E-19 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS06210 9de17cb6b069233d17494be5ac0b85a3 1089 PANTHER PTHR30001 1 846 0.0 T 13-09-2016 PMA3_RS06210 9de17cb6b069233d17494be5ac0b85a3 1089 Pfam PF00575 S1 RNA binding domain 36 116 9.2E-15 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS06210 9de17cb6b069233d17494be5ac0b85a3 1089 PANTHER PTHR30001:SF1 1 846 0.0 T 13-09-2016 PMA3_RS06210 9de17cb6b069233d17494be5ac0b85a3 1089 Hamap MF_00970 Ribonuclease E [rne]. 1 1031 35.454 T 13-09-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 PMA3_RS06210 9de17cb6b069233d17494be5ac0b85a3 1089 Pfam PF10150 Ribonuclease E/G family 119 388 6.6E-95 T 13-09-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PMA3_RS06210 9de17cb6b069233d17494be5ac0b85a3 1089 SMART SM00316 37 117 8.6E-13 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS06210 9de17cb6b069233d17494be5ac0b85a3 1089 Gene3D G3DSA:2.40.50.140 31 123 1.5E-34 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS18340 1e90514c5e5f4ae78592e8aedbaea792 427 PIRSF PIRSF006066 1 427 5.7E-156 T 13-09-2016 IPR004681 TRAP transporter permease protein GO:0016021 PMA3_RS18340 1e90514c5e5f4ae78592e8aedbaea792 427 PANTHER PTHR33362 1 427 1.3E-242 T 13-09-2016 PMA3_RS18340 1e90514c5e5f4ae78592e8aedbaea792 427 PANTHER PTHR33362:SF6 1 427 1.3E-242 T 13-09-2016 PMA3_RS18340 1e90514c5e5f4ae78592e8aedbaea792 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 414 1.5E-125 T 13-09-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PMA3_RS18340 1e90514c5e5f4ae78592e8aedbaea792 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 4.4E-147 T 13-09-2016 IPR004681 TRAP transporter permease protein GO:0016021 PMA3_RS06810 572555c6ab2cf091a29c5e9941635166 479 Gene3D G3DSA:1.10.10.10 6 74 2.3E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06810 572555c6ab2cf091a29c5e9941635166 479 SUPERFAMILY SSF46785 4 73 2.93E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06810 572555c6ab2cf091a29c5e9941635166 479 Pfam PF00155 Aminotransferase class I and II 140 449 2.2E-25 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS06810 572555c6ab2cf091a29c5e9941635166 479 PANTHER PTHR11751 88 470 1.5E-168 T 13-09-2016 PMA3_RS06810 572555c6ab2cf091a29c5e9941635166 479 Gene3D G3DSA:3.90.1150.10 350 447 2.4E-5 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS06810 572555c6ab2cf091a29c5e9941635166 479 SMART SM00345 10 69 9.8E-22 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS06810 572555c6ab2cf091a29c5e9941635166 479 SUPERFAMILY SSF53383 95 465 7.74E-89 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS06810 572555c6ab2cf091a29c5e9941635166 479 Gene3D G3DSA:3.40.640.10 140 349 1.2E-62 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS06810 572555c6ab2cf091a29c5e9941635166 479 PANTHER PTHR11751:SF314 88 470 1.5E-168 T 13-09-2016 PMA3_RS06810 572555c6ab2cf091a29c5e9941635166 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 8.4E-18 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS25630 71a63af963f026ec713bbe8900c344b6 564 PANTHER PTHR30003 2 564 0.0 T 13-09-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PMA3_RS25630 71a63af963f026ec713bbe8900c344b6 564 PANTHER PTHR30003:SF6 2 564 0.0 T 13-09-2016 PMA3_RS25630 71a63af963f026ec713bbe8900c344b6 564 Pfam PF02652 L-lactate permease 16 552 4.0E-206 T 13-09-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PMA3_RS25630 71a63af963f026ec713bbe8900c344b6 564 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 556 3.9E-222 T 13-09-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PANTHER PTHR11686 6 609 7.8E-200 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 Pfam PF01019 Gamma-glutamyltranspeptidase 72 605 1.1E-147 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PANTHER PTHR11686:SF27 6 609 7.8E-200 T 13-09-2016 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 58 602 1.7E-108 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 SUPERFAMILY SSF56235 48 609 3.47E-158 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 446 464 9.5E-67 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 170 189 9.5E-67 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 424 442 9.5E-67 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 9.5E-67 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 508 525 9.5E-67 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 152 170 9.5E-67 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 482 497 9.5E-67 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 9.5E-67 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS03710 f59ef584f76d8e73deb03cf7a43c9b7f 610 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 79 104 9.5E-67 T 13-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PMA3_RS14925 8b21c95f71c96ac8562d80af2299f928 329 Gene3D G3DSA:2.40.110.10 98 175 3.6E-12 T 13-09-2016 PMA3_RS14925 8b21c95f71c96ac8562d80af2299f928 329 SUPERFAMILY SSF56645 23 183 3.93E-19 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS09420 cf154c946d62a4a8c616e464c1007ff8 167 PANTHER PTHR23091:SF187 1 139 1.4E-18 T 13-09-2016 PMA3_RS09420 cf154c946d62a4a8c616e464c1007ff8 167 Pfam PF13420 Acetyltransferase (GNAT) domain 3 153 1.0E-14 T 13-09-2016 PMA3_RS09420 cf154c946d62a4a8c616e464c1007ff8 167 PANTHER PTHR23091 1 139 1.4E-18 T 13-09-2016 PMA3_RS09420 cf154c946d62a4a8c616e464c1007ff8 167 Gene3D G3DSA:3.40.630.30 1 161 4.7E-35 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS09420 cf154c946d62a4a8c616e464c1007ff8 167 SUPERFAMILY SSF55729 1 160 7.44E-30 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 1.3E-36 T 13-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 SUPERFAMILY SSF52317 5 204 1.01E-54 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 Gene3D G3DSA:3.40.50.620 223 399 1.1E-58 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.6E-5 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.6E-5 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.6E-5 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 Pfam PF02540 NAD synthase 217 292 6.7E-8 T 13-09-2016 IPR022310 NAD/GMP synthase PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.46 T 13-09-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 PANTHER PTHR11922 4 522 2.1E-282 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 Gene3D G3DSA:3.40.50.880 5 222 1.3E-59 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 PANTHER PTHR11922:SF2 4 522 2.1E-282 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 1.7E-77 T 13-09-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 5.1E-7 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 5.1E-7 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 5.1E-7 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 Gene3D G3DSA:3.30.300.10 401 525 1.6E-52 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 SUPERFAMILY SSF52402 197 420 7.06E-57 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 Pfam PF00958 GMP synthase C terminal domain 433 524 2.0E-41 T 13-09-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 SUPERFAMILY SSF54810 405 525 3.53E-49 T 13-09-2016 PMA3_RS24140 4573ce102bd022ffb1a685650e28129a 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 4.3E-148 T 13-09-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 8.1E-17 T 13-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 Gene3D G3DSA:1.10.10.10 8 59 3.5E-10 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 PANTHER PTHR30363:SF15 3 257 5.2E-149 T 13-09-2016 PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 PANTHER PTHR30363 3 257 5.2E-149 T 13-09-2016 PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 Pfam PF00455 DeoR C terminal sensor domain 77 231 1.9E-42 T 13-09-2016 IPR014036 DeoR C-terminal sensor domain PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 13-09-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 SUPERFAMILY SSF100950 76 233 1.67E-30 T 13-09-2016 PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 SUPERFAMILY SSF46785 7 64 3.55E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 SMART SM00420 9 61 8.5E-16 T 13-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 SMART SM01134 72 233 5.2E-55 T 13-09-2016 PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 7.3E-7 T 13-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 7.3E-7 T 13-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PMA3_RS29990 516b74c9469b29ddbc3e6e4b08245a5f 258 Gene3D G3DSA:3.40.50.1360 75 221 2.8E-15 T 13-09-2016 PMA3_RS06675 a620093b130531840725357d09b3b3d1 188 Gene3D G3DSA:3.10.540.10 13 86 1.2E-36 T 13-09-2016 PMA3_RS06675 a620093b130531840725357d09b3b3d1 188 PIRSF PIRSF029557 5 188 2.3E-83 T 13-09-2016 IPR010707 Protein of unknown function DUF1285 PMA3_RS06675 a620093b130531840725357d09b3b3d1 188 Pfam PF06938 Protein of unknown function (DUF1285) 36 180 3.6E-61 T 13-09-2016 IPR010707 Protein of unknown function DUF1285 PMA3_RS06675 a620093b130531840725357d09b3b3d1 188 Gene3D G3DSA:2.20.70.10 170 182 5.0E-5 T 13-09-2016 PMA3_RS06675 a620093b130531840725357d09b3b3d1 188 Gene3D G3DSA:2.30.270.10 87 156 3.1E-33 T 13-09-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain PMA3_RS10495 5c89d63521aa108021cc8cec68162806 280 Pfam PF12277 Protein of unknown function (DUF3618) 11 51 1.1E-9 T 13-09-2016 IPR022062 Protein of unknown function DUF3618 PMA3_RS09125 95925eaa28af2b789b4d66a371534967 458 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS09125 95925eaa28af2b789b4d66a371534967 458 Gene3D G3DSA:3.40.640.10 89 323 2.2E-72 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS09125 95925eaa28af2b789b4d66a371534967 458 Pfam PF00202 Aminotransferase class-III 37 448 1.8E-102 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS09125 95925eaa28af2b789b4d66a371534967 458 PANTHER PTHR11986 14 457 1.7E-183 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS09125 95925eaa28af2b789b4d66a371534967 458 PANTHER PTHR11986:SF7 14 457 1.7E-183 T 13-09-2016 PMA3_RS09125 95925eaa28af2b789b4d66a371534967 458 Gene3D G3DSA:3.90.1150.10 324 451 5.9E-49 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS09125 95925eaa28af2b789b4d66a371534967 458 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 18 457 3.0E-216 T 13-09-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 PMA3_RS09125 95925eaa28af2b789b4d66a371534967 458 SUPERFAMILY SSF53383 28 449 9.0E-125 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS09450 82273087837befe67ae9160d081415e9 238 PANTHER PTHR30041:SF1 12 238 1.4E-131 T 13-09-2016 PMA3_RS09450 82273087837befe67ae9160d081415e9 238 PANTHER PTHR30041 12 238 1.4E-131 T 13-09-2016 PMA3_RS09450 82273087837befe67ae9160d081415e9 238 Pfam PF03358 NADPH-dependent FMN reductase 32 174 1.8E-27 T 13-09-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PMA3_RS09450 82273087837befe67ae9160d081415e9 238 Gene3D G3DSA:3.40.50.360 5 228 3.5E-103 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS09450 82273087837befe67ae9160d081415e9 238 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 6 224 7.4E-125 T 13-09-2016 IPR014063 Arsenate resistance ArsH PMA3_RS09450 82273087837befe67ae9160d081415e9 238 SUPERFAMILY SSF52218 4 227 1.42E-67 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS22130 10ed1ea4c16ea775d52179b1db91b7ed 288 PANTHER PTHR22911:SF27 3 280 2.4E-54 T 13-09-2016 PMA3_RS22130 10ed1ea4c16ea775d52179b1db91b7ed 288 Pfam PF00892 EamA-like transporter family 4 128 2.5E-6 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS22130 10ed1ea4c16ea775d52179b1db91b7ed 288 Pfam PF00892 EamA-like transporter family 138 273 1.0E-7 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS22130 10ed1ea4c16ea775d52179b1db91b7ed 288 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 12 272 6.3E-72 T 13-09-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 PMA3_RS22130 10ed1ea4c16ea775d52179b1db91b7ed 288 PANTHER PTHR22911 3 280 2.4E-54 T 13-09-2016 PMA3_RS22130 10ed1ea4c16ea775d52179b1db91b7ed 288 SUPERFAMILY SSF103481 35 130 1.57E-7 T 13-09-2016 PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 PANTHER PTHR10909:SF296 1 477 4.7E-261 T 13-09-2016 PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 33 8.2E-12 T 13-09-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 Gene3D G3DSA:1.10.540.10 38 159 5.2E-14 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 Gene3D G3DSA:1.20.140.10 269 461 3.9E-52 T 13-09-2016 PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 SUPERFAMILY SSF47203 289 462 4.19E-48 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 PANTHER PTHR10909 1 477 4.7E-261 T 13-09-2016 PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 2.8E-21 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 SUPERFAMILY SSF56645 38 281 4.71E-53 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 273 2.7E-16 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 Gene3D G3DSA:2.40.110.10 162 268 7.5E-26 T 13-09-2016 PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 585 1.7E-34 T 13-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PMA3_RS27755 710bc64adc12b06e3ca8f5e1caa5ebac 592 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 158 2.8E-11 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS25185 10d360ea8d23e283ef7064b3ac90507e 485 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 422 2.4E-157 T 13-09-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PMA3_RS25185 10d360ea8d23e283ef7064b3ac90507e 485 SUPERFAMILY SSF50249 39 118 5.15E-20 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS25185 10d360ea8d23e283ef7064b3ac90507e 485 PANTHER PTHR30001 1 485 4.8E-211 T 13-09-2016 PMA3_RS25185 10d360ea8d23e283ef7064b3ac90507e 485 SMART SM00316 37 113 2.8E-10 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS25185 10d360ea8d23e283ef7064b3ac90507e 485 Gene3D G3DSA:2.40.50.140 30 119 1.2E-31 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS25185 10d360ea8d23e283ef7064b3ac90507e 485 Pfam PF10150 Ribonuclease E/G family 115 389 1.2E-103 T 13-09-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PMA3_RS25185 10d360ea8d23e283ef7064b3ac90507e 485 Pfam PF00575 S1 RNA binding domain 38 100 1.4E-8 T 13-09-2016 IPR003029 S1 domain GO:0003676 PMA3_RS26810 d590279f01c51f68b4f46af82a7aad0c 419 PANTHER PTHR35149 11 293 5.7E-40 T 13-09-2016 PMA3_RS26810 d590279f01c51f68b4f46af82a7aad0c 419 PANTHER PTHR35149:SF2 11 293 5.7E-40 T 13-09-2016 PMA3_RS26810 d590279f01c51f68b4f46af82a7aad0c 419 Pfam PF07510 Protein of unknown function (DUF1524) 126 267 1.2E-24 T 13-09-2016 IPR011089 Domain of unknown function DUF1524 PMA3_RS01495 8a8914c7c868020bad591679394bfb73 207 PANTHER PTHR39555 9 203 4.3E-58 T 13-09-2016 PMA3_RS01495 8a8914c7c868020bad591679394bfb73 207 Gene3D G3DSA:1.10.287.540 67 102 3.2E-17 T 13-09-2016 IPR023218 UPF0291 structural domain PMA3_RS01495 8a8914c7c868020bad591679394bfb73 207 PIRSF PIRSF016482 9 206 9.5E-72 T 13-09-2016 IPR007445 Pilus assembly protein, PilO PMA3_RS01495 8a8914c7c868020bad591679394bfb73 207 PANTHER PTHR39555:SF1 9 203 4.3E-58 T 13-09-2016 PMA3_RS01495 8a8914c7c868020bad591679394bfb73 207 Gene3D G3DSA:3.30.70.60 103 204 1.6E-38 T 13-09-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PMA3_RS01495 8a8914c7c868020bad591679394bfb73 207 Pfam PF04350 Pilus assembly protein, PilO 61 202 2.6E-53 T 13-09-2016 IPR007445 Pilus assembly protein, PilO PMA3_RS10965 08eece64ae2d6df05295055c73136ed6 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 8.0E-27 T 13-09-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 PMA3_RS10965 08eece64ae2d6df05295055c73136ed6 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 2.1E-39 T 13-09-2016 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 PMA3_RS10965 08eece64ae2d6df05295055c73136ed6 96 PIRSF PIRSF001486 1 94 2.6E-44 T 13-09-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 PMA3_RS10965 08eece64ae2d6df05295055c73136ed6 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 7.3E-46 T 13-09-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 PMA3_RS10965 08eece64ae2d6df05295055c73136ed6 96 SUPERFAMILY SSF54909 1 95 1.56E-38 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.4E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.4E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.4E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.4E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.4E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-38 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 SUPERFAMILY SSF51735 6 256 3.9E-75 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 7 257 3.8E-102 T 13-09-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PANTHER PTHR24322 153 185 1.9E-55 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.4E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.4E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.4E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PANTHER PTHR24322 11 137 1.9E-55 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PANTHER PTHR24322:SF330 11 137 1.9E-55 T 13-09-2016 PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 PANTHER PTHR24322:SF330 153 185 1.9E-55 T 13-09-2016 PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 Gene3D G3DSA:3.40.50.720 2 256 1.7E-79 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS12370 a98a3ff84911c0fffa314c11196860fa 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 6.0E-56 T 13-09-2016 PMA3_RS02670 2b472f345f4c59d461617d653ec5be24 345 SUPERFAMILY SSF48019 213 337 5.02E-33 T 13-09-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PMA3_RS02670 2b472f345f4c59d461617d653ec5be24 345 Gene3D G3DSA:3.40.50.300 1 141 1.3E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02670 2b472f345f4c59d461617d653ec5be24 345 PANTHER PTHR34388 1 345 2.3E-83 T 13-09-2016 PMA3_RS02670 2b472f345f4c59d461617d653ec5be24 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 336 4.0E-115 T 13-09-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 PMA3_RS02670 2b472f345f4c59d461617d653ec5be24 345 Gene3D G3DSA:1.10.8.60 145 223 1.5E-35 T 13-09-2016 PMA3_RS02670 2b472f345f4c59d461617d653ec5be24 345 Pfam PF06144 DNA polymerase III, delta subunit 20 191 9.5E-33 T 13-09-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 PMA3_RS02670 2b472f345f4c59d461617d653ec5be24 345 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 218 340 2.1E-14 T 13-09-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS02670 2b472f345f4c59d461617d653ec5be24 345 SUPERFAMILY SSF52540 1 211 3.96E-51 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02670 2b472f345f4c59d461617d653ec5be24 345 Gene3D G3DSA:1.20.272.20 224 340 1.1E-41 T 13-09-2016 PMA3_RS05310 42624ca5946d2e99ce281224e058ab2b 233 SMART SM00382 26 210 1.3E-6 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS05310 42624ca5946d2e99ce281224e058ab2b 233 PANTHER PTHR24220 3 232 3.3E-131 T 13-09-2016 PMA3_RS05310 42624ca5946d2e99ce281224e058ab2b 233 PIRSF PIRSF039137 1 233 2.1E-103 T 13-09-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 PMA3_RS05310 42624ca5946d2e99ce281224e058ab2b 233 Pfam PF00005 ABC transporter 17 161 6.6E-33 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS05310 42624ca5946d2e99ce281224e058ab2b 233 SUPERFAMILY SSF52540 2 231 5.65E-61 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05310 42624ca5946d2e99ce281224e058ab2b 233 PANTHER PTHR24220:SF568 3 232 3.3E-131 T 13-09-2016 PMA3_RS05310 42624ca5946d2e99ce281224e058ab2b 233 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 210 232 1.3E-4 T 13-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PMA3_RS05310 42624ca5946d2e99ce281224e058ab2b 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS05310 42624ca5946d2e99ce281224e058ab2b 233 Gene3D G3DSA:3.40.50.300 1 229 2.5E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05435 2778c7299c367ef16d4517b251d026a3 419 Gene3D G3DSA:2.40.160.10 36 419 3.3E-150 T 13-09-2016 IPR023614 Porin domain PMA3_RS05435 2778c7299c367ef16d4517b251d026a3 419 PANTHER PTHR34596 1 419 5.8E-160 T 13-09-2016 PMA3_RS05435 2778c7299c367ef16d4517b251d026a3 419 Pfam PF03573 outer membrane porin, OprD family 30 417 4.4E-153 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS12770 a4e4024c95c5767081b498900f85e793 162 SUPERFAMILY SSF141452 2 160 1.83E-46 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS12770 a4e4024c95c5767081b498900f85e793 162 Pfam PF05638 Type VI secretion system effector, Hcp 6 135 9.2E-36 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS12770 a4e4024c95c5767081b498900f85e793 162 PANTHER PTHR36152 1 159 2.1E-35 T 13-09-2016 PMA3_RS12770 a4e4024c95c5767081b498900f85e793 162 PANTHER PTHR36152:SF1 1 159 2.1E-35 T 13-09-2016 PMA3_RS12770 a4e4024c95c5767081b498900f85e793 162 Gene3D G3DSA:2.30.110.20 1 160 2.3E-58 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS12770 a4e4024c95c5767081b498900f85e793 162 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 144 3.3E-19 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS27160 8e00ade8c4b424b5cfc0ac8aeda286b2 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-09-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 PMA3_RS27160 8e00ade8c4b424b5cfc0ac8aeda286b2 118 PIRSF PIRSF002134 1 118 1.5E-43 T 13-09-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27160 8e00ade8c4b424b5cfc0ac8aeda286b2 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.0E-32 T 13-09-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27160 8e00ade8c4b424b5cfc0ac8aeda286b2 118 SUPERFAMILY SSF46946 2 114 8.11E-48 T 13-09-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PMA3_RS27160 8e00ade8c4b424b5cfc0ac8aeda286b2 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.0E-54 T 13-09-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27160 8e00ade8c4b424b5cfc0ac8aeda286b2 118 Gene3D G3DSA:4.10.910.10 72 118 1.4E-26 T 13-09-2016 IPR027437 30s ribosomal protein S13, C-terminal PMA3_RS27160 8e00ade8c4b424b5cfc0ac8aeda286b2 118 Gene3D G3DSA:1.10.8.50 1 71 1.8E-30 T 13-09-2016 PMA3_RS27160 8e00ade8c4b424b5cfc0ac8aeda286b2 118 PANTHER PTHR10871 1 118 1.9E-68 T 13-09-2016 PMA3_RS27160 8e00ade8c4b424b5cfc0ac8aeda286b2 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.402 T 13-09-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS07380 cfaa8fc0d436591e84437e5521d64adb 388 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 13-09-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PMA3_RS07380 cfaa8fc0d436591e84437e5521d64adb 388 Gene3D G3DSA:3.40.640.10 18 253 3.8E-85 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS07380 cfaa8fc0d436591e84437e5521d64adb 388 SUPERFAMILY SSF53383 3 377 4.62E-100 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS07380 cfaa8fc0d436591e84437e5521d64adb 388 PANTHER PTHR11601:SF45 1 376 1.8E-173 T 13-09-2016 PMA3_RS07380 cfaa8fc0d436591e84437e5521d64adb 388 Pfam PF00266 Aminotransferase class-V 7 368 1.4E-76 T 13-09-2016 IPR000192 Aminotransferase class V domain PMA3_RS07380 cfaa8fc0d436591e84437e5521d64adb 388 PIRSF PIRSF005572 3 382 2.9E-115 T 13-09-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PMA3_RS07380 cfaa8fc0d436591e84437e5521d64adb 388 PANTHER PTHR11601 1 376 1.8E-173 T 13-09-2016 PMA3_RS07380 cfaa8fc0d436591e84437e5521d64adb 388 Gene3D G3DSA:3.90.1150.10 254 374 5.0E-34 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS28430 7cf8a840c382b346fe4e87159781cfc6 299 PANTHER PTHR33446 16 280 2.1E-53 T 13-09-2016 PMA3_RS28430 7cf8a840c382b346fe4e87159781cfc6 299 SUPERFAMILY SSF74653 130 143 5.49E-20 T 13-09-2016 PMA3_RS28430 7cf8a840c382b346fe4e87159781cfc6 299 SUPERFAMILY SSF74653 187 294 5.49E-20 T 13-09-2016 PMA3_RS28430 7cf8a840c382b346fe4e87159781cfc6 299 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 213 284 1.1E-14 T 13-09-2016 IPR006260 TonB, C-terminal GO:0006810 PMA3_RS28430 7cf8a840c382b346fe4e87159781cfc6 299 Gene3D G3DSA:3.30.1150.10 189 294 2.4E-20 T 13-09-2016 PMA3_RS28430 7cf8a840c382b346fe4e87159781cfc6 299 PANTHER PTHR33446:SF2 16 280 2.1E-53 T 13-09-2016 PMA3_RS28430 7cf8a840c382b346fe4e87159781cfc6 299 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 215 290 3.2E-12 T 13-09-2016 IPR006260 TonB, C-terminal GO:0006810 PMA3_RS09180 f9516666ec821d01df4a92d0e540bcb9 261 Pfam PF06276 Ferric iron reductase FhuF-like transporter 65 212 7.6E-15 T 13-09-2016 IPR022770 Ferric iron reductase FhuF domain PMA3_RS09180 f9516666ec821d01df4a92d0e540bcb9 261 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 232 253 1.0E-7 T 13-09-2016 IPR024726 Ferric iron reductase, C-terminal GO:0051537 PMA3_RS12345 f10e6285930fac2a34a7023a80ad16f7 310 PANTHER PTHR10584 13 309 4.1E-122 T 13-09-2016 PMA3_RS12345 f10e6285930fac2a34a7023a80ad16f7 310 Gene3D G3DSA:3.40.1190.20 9 307 2.5E-70 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS12345 f10e6285930fac2a34a7023a80ad16f7 310 Pfam PF00294 pfkB family carbohydrate kinase 13 307 1.5E-52 T 13-09-2016 IPR011611 Carbohydrate kinase PfkB PMA3_RS12345 f10e6285930fac2a34a7023a80ad16f7 310 SUPERFAMILY SSF53613 11 308 2.18E-70 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS12345 f10e6285930fac2a34a7023a80ad16f7 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 264 277 - T 13-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PMA3_RS12345 f10e6285930fac2a34a7023a80ad16f7 310 PANTHER PTHR10584:SF57 13 309 4.1E-122 T 13-09-2016 PMA3_RS30185 8601b4724346341c92beed8c0dd9266b 368 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 78 297 4.0E-77 T 13-09-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 PMA3_RS30185 8601b4724346341c92beed8c0dd9266b 368 SUPERFAMILY SSF102405 90 298 3.21E-46 T 13-09-2016 PMA3_RS30185 8601b4724346341c92beed8c0dd9266b 368 Pfam PF02481 DNA recombination-mediator protein A 81 288 2.8E-76 T 13-09-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 PMA3_RS30185 8601b4724346341c92beed8c0dd9266b 368 PANTHER PTHR32039 65 366 2.1E-105 T 13-09-2016 PMA3_RS30185 8601b4724346341c92beed8c0dd9266b 368 Gene3D G3DSA:3.40.50.450 122 300 5.9E-16 T 13-09-2016 PMA3_RS30185 8601b4724346341c92beed8c0dd9266b 368 PANTHER PTHR32039:SF8 65 366 2.1E-105 T 13-09-2016 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 PANTHER PTHR11019:SF90 16 39 6.0E-73 T 13-09-2016 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 PANTHER PTHR11019:SF90 65 331 6.0E-73 T 13-09-2016 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 PANTHER PTHR11019 16 39 6.0E-73 T 13-09-2016 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 PANTHER PTHR11019 65 331 6.0E-73 T 13-09-2016 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 Gene3D G3DSA:1.10.10.60 280 336 4.4E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 SUPERFAMILY SSF46689 224 274 2.91E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 SMART SM00342 240 323 3.4E-28 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 Gene3D G3DSA:3.40.50.880 17 230 1.3E-43 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 Pfam PF01965 DJ-1/PfpI family 20 183 2.3E-17 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 SUPERFAMILY SSF46689 276 324 5.82E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 Pfam PF12833 Helix-turn-helix domain 246 322 2.0E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 Gene3D G3DSA:1.10.10.60 231 277 8.3E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28085 b8fc04cd09dcd032b44480bfff1becfc 367 SUPERFAMILY SSF52317 15 205 4.25E-47 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.6E-6 T 13-09-2016 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 1.6E-6 T 13-09-2016 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 1.6E-6 T 13-09-2016 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 PANTHER PTHR22912 64 368 4.8E-25 T 13-09-2016 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 PANTHER PTHR22912:SF180 64 368 4.8E-25 T 13-09-2016 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 312 6.1E-46 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 Gene3D G3DSA:3.50.50.60 110 323 2.7E-31 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 SUPERFAMILY SSF51905 210 339 2.33E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 SUPERFAMILY SSF51905 3 172 2.33E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 7.6E-13 T 13-09-2016 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 7.6E-13 T 13-09-2016 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 7.6E-13 T 13-09-2016 PMA3_RS11040 ba609937edf79b0d228e15bdf6b3100f 400 Gene3D G3DSA:3.50.50.60 1 109 1.4E-14 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS21500 25fa916b0ddad4061be25421e40ef03a 151 SUPERFAMILY SSF82093 30 137 3.14E-41 T 13-09-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PMA3_RS21500 25fa916b0ddad4061be25421e40ef03a 151 PANTHER PTHR34128 2 142 2.9E-66 T 13-09-2016 PMA3_RS21500 25fa916b0ddad4061be25421e40ef03a 151 PANTHER PTHR34128:SF1 2 142 2.9E-66 T 13-09-2016 PMA3_RS21500 25fa916b0ddad4061be25421e40ef03a 151 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 141 33.428 T 13-09-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PMA3_RS21500 25fa916b0ddad4061be25421e40ef03a 151 Pfam PF03100 CcmE 5 131 2.7E-47 T 13-09-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PMA3_RS21500 25fa916b0ddad4061be25421e40ef03a 151 Gene3D G3DSA:2.40.50.140 27 125 4.8E-39 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS03165 b3dfa7da2b250a00a7205d3d6ce9d88e 113 Pfam PF03831 PhnA domain 47 113 9.9E-32 T 13-09-2016 IPR013988 PhnA protein, C-terminal PMA3_RS03165 b3dfa7da2b250a00a7205d3d6ce9d88e 113 PANTHER PTHR30305 2 113 4.0E-78 T 13-09-2016 PMA3_RS03165 b3dfa7da2b250a00a7205d3d6ce9d88e 113 Gene3D G3DSA:2.20.25.10 2 40 8.6E-23 T 13-09-2016 PMA3_RS03165 b3dfa7da2b250a00a7205d3d6ce9d88e 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 8.1E-49 T 13-09-2016 IPR004624 PhnA protein PMA3_RS03165 b3dfa7da2b250a00a7205d3d6ce9d88e 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 8.0E-17 T 13-09-2016 IPR013987 PhnA protein, N-terminal PMA3_RS03165 b3dfa7da2b250a00a7205d3d6ce9d88e 113 Gene3D G3DSA:2.30.30.40 45 113 1.5E-35 T 13-09-2016 PMA3_RS03165 b3dfa7da2b250a00a7205d3d6ce9d88e 113 SUPERFAMILY SSF57783 3 35 5.5E-15 T 13-09-2016 PMA3_RS03165 b3dfa7da2b250a00a7205d3d6ce9d88e 113 SUPERFAMILY SSF82057 42 113 2.52E-28 T 13-09-2016 PMA3_RS03410 d663957d31e5c6bea2c70163f130818f 566 SUPERFAMILY SSF52540 172 564 1.01E-99 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03410 d663957d31e5c6bea2c70163f130818f 566 SUPERFAMILY SSF160246 4 143 1.02E-35 T 13-09-2016 PMA3_RS03410 d663957d31e5c6bea2c70163f130818f 566 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 385 399 - T 13-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PMA3_RS03410 d663957d31e5c6bea2c70163f130818f 566 Gene3D G3DSA:3.40.50.300 298 565 5.0E-97 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03410 d663957d31e5c6bea2c70163f130818f 566 PANTHER PTHR30258 1 565 8.2E-260 T 13-09-2016 PMA3_RS03410 d663957d31e5c6bea2c70163f130818f 566 Gene3D G3DSA:3.30.450.90 165 290 2.0E-50 T 13-09-2016 PMA3_RS03410 d663957d31e5c6bea2c70163f130818f 566 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 8 566 7.1E-260 T 13-09-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 PMA3_RS03410 d663957d31e5c6bea2c70163f130818f 566 PANTHER PTHR30258:SF1 1 565 8.2E-260 T 13-09-2016 PMA3_RS03410 d663957d31e5c6bea2c70163f130818f 566 Pfam PF00437 Type II/IV secretion system protein 190 457 2.8E-88 T 13-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PMA3_RS03410 d663957d31e5c6bea2c70163f130818f 566 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 146 7.7E-16 T 13-09-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 PMA3_RS23390 6b1c3ec3ebd09d3f9f26d189980279d6 331 PANTHER PTHR37693 1 331 2.7E-65 T 13-09-2016 PMA3_RS23390 6b1c3ec3ebd09d3f9f26d189980279d6 331 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 8 309 2.0E-45 T 13-09-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PMA3_RS23390 6b1c3ec3ebd09d3f9f26d189980279d6 331 PANTHER PTHR37693:SF1 1 331 2.7E-65 T 13-09-2016 PMA3_RS23390 6b1c3ec3ebd09d3f9f26d189980279d6 331 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 7 317 7.8E-27 T 13-09-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PMA3_RS24895 845903ad6605d8cda1a874d9ad988890 186 Pfam PF01227 GTP cyclohydrolase I 7 182 6.1E-75 T 13-09-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS24895 845903ad6605d8cda1a874d9ad988890 186 Gene3D G3DSA:3.30.1130.10 56 183 2.0E-63 T 13-09-2016 PMA3_RS24895 845903ad6605d8cda1a874d9ad988890 186 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 110 120 - T 13-09-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS24895 845903ad6605d8cda1a874d9ad988890 186 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 13-09-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS24895 845903ad6605d8cda1a874d9ad988890 186 PANTHER PTHR11109 4 184 3.5E-113 T 13-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS24895 845903ad6605d8cda1a874d9ad988890 186 Gene3D G3DSA:1.10.286.10 5 52 8.8E-21 T 13-09-2016 PMA3_RS24895 845903ad6605d8cda1a874d9ad988890 186 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 6 183 4.0E-75 T 13-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS24895 845903ad6605d8cda1a874d9ad988890 186 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 183 38.09 T 13-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS24895 845903ad6605d8cda1a874d9ad988890 186 SUPERFAMILY SSF55620 5 183 3.41E-78 T 13-09-2016 PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 325 2.0E-43 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 36 164 3.9E-12 T 13-09-2016 IPR000014 PAS domain PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 PANTHER PTHR10799:SF750 46 327 1.9E-28 T 13-09-2016 PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 SUPERFAMILY SSF55073 173 327 7.46E-47 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 PANTHER PTHR10799 46 327 1.9E-28 T 13-09-2016 PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 SMART SM00267 157 329 1.0E-48 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 SUPERFAMILY SSF55785 48 158 5.8E-19 T 13-09-2016 IPR000014 PAS domain PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 SMART SM00086 114 157 0.001 T 13-09-2016 IPR001610 PAC motif PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 326 2.7E-47 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 Pfam PF08447 PAS fold 63 151 6.6E-22 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 Gene3D G3DSA:3.30.70.270 170 327 4.4E-52 T 13-09-2016 PMA3_RS00550 e28072b8e0bbc142a03f632667896413 329 Gene3D G3DSA:3.30.450.20 33 155 2.7E-23 T 13-09-2016 PMA3_RS00885 8701f22845feae20d02746dbf8aea035 146 SMART SM00257 96 145 1.3E-10 T 13-09-2016 IPR018392 LysM domain PMA3_RS00885 8701f22845feae20d02746dbf8aea035 146 PANTHER PTHR34700 1 146 3.0E-29 T 13-09-2016 PMA3_RS00885 8701f22845feae20d02746dbf8aea035 146 Gene3D G3DSA:3.10.350.10 98 145 2.6E-7 T 13-09-2016 IPR018392 LysM domain PMA3_RS00885 8701f22845feae20d02746dbf8aea035 146 Pfam PF01476 LysM domain 98 145 2.0E-8 T 13-09-2016 IPR018392 LysM domain PMA3_RS00885 8701f22845feae20d02746dbf8aea035 146 Pfam PF04972 BON domain 25 87 1.6E-12 T 13-09-2016 IPR007055 BON domain PMA3_RS00885 8701f22845feae20d02746dbf8aea035 146 SUPERFAMILY SSF54106 95 145 8.11E-6 T 13-09-2016 IPR018392 LysM domain PMA3_RS21835 b8312b14ea57cd4acde9ef40acc71864 397 PANTHER PTHR11879 1 395 2.5E-228 T 13-09-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PMA3_RS21835 b8312b14ea57cd4acde9ef40acc71864 397 Pfam PF00155 Aminotransferase class I and II 28 392 2.8E-79 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS21835 b8312b14ea57cd4acde9ef40acc71864 397 PRINTS PR00799 Aspartate aminotransferase signature 341 359 7.3E-35 T 13-09-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PMA3_RS21835 b8312b14ea57cd4acde9ef40acc71864 397 PRINTS PR00799 Aspartate aminotransferase signature 175 194 7.3E-35 T 13-09-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PMA3_RS21835 b8312b14ea57cd4acde9ef40acc71864 397 PRINTS PR00799 Aspartate aminotransferase signature 206 218 7.3E-35 T 13-09-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PMA3_RS21835 b8312b14ea57cd4acde9ef40acc71864 397 PRINTS PR00799 Aspartate aminotransferase signature 273 298 7.3E-35 T 13-09-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PMA3_RS21835 b8312b14ea57cd4acde9ef40acc71864 397 PANTHER PTHR11879:SF12 1 395 2.5E-228 T 13-09-2016 PMA3_RS21835 b8312b14ea57cd4acde9ef40acc71864 397 Gene3D G3DSA:3.40.640.10 47 315 5.3E-94 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS21835 b8312b14ea57cd4acde9ef40acc71864 397 SUPERFAMILY SSF53383 2 397 3.98E-111 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS12560 09ecc752f2241674740dce4cb2c9c752 210 PANTHER PTHR11080 1 205 9.5E-74 T 13-09-2016 PMA3_RS12560 09ecc752f2241674740dce4cb2c9c752 210 PANTHER PTHR11080:SF38 1 205 9.5E-74 T 13-09-2016 PMA3_RS12560 09ecc752f2241674740dce4cb2c9c752 210 SUPERFAMILY SSF52499 18 208 2.35E-50 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS12560 09ecc752f2241674740dce4cb2c9c752 210 Pfam PF00857 Isochorismatase family 26 202 2.3E-36 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS12560 09ecc752f2241674740dce4cb2c9c752 210 Gene3D G3DSA:3.40.50.850 20 209 1.7E-51 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS07450 2fd8efd23d9414ed26b6cc488fab80e6 630 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 607 8.6E-227 T 13-09-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 PMA3_RS07450 2fd8efd23d9414ed26b6cc488fab80e6 630 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 604 2.7E-73 T 13-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PMA3_RS07450 2fd8efd23d9414ed26b6cc488fab80e6 630 Gene3D G3DSA:3.40.710.10 250 608 6.7E-108 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS07450 2fd8efd23d9414ed26b6cc488fab80e6 630 SUPERFAMILY SSF56519 56 250 1.24E-49 T 13-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PMA3_RS07450 2fd8efd23d9414ed26b6cc488fab80e6 630 PANTHER PTHR30627:SF2 5 610 3.4E-233 T 13-09-2016 PMA3_RS07450 2fd8efd23d9414ed26b6cc488fab80e6 630 PANTHER PTHR30627 5 610 3.4E-233 T 13-09-2016 PMA3_RS07450 2fd8efd23d9414ed26b6cc488fab80e6 630 SUPERFAMILY SSF56601 251 607 4.02E-99 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS07450 2fd8efd23d9414ed26b6cc488fab80e6 630 Gene3D G3DSA:3.90.1310.10 131 249 8.1E-38 T 13-09-2016 PMA3_RS07450 2fd8efd23d9414ed26b6cc488fab80e6 630 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 236 4.1E-46 T 13-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PMA3_RS13610 daab8bce34017595b1e08d551adc9f2b 106 Pfam PF13478 XdhC Rossmann domain 13 94 2.7E-27 T 13-09-2016 IPR027051 XdhC Rossmann domain PMA3_RS13610 daab8bce34017595b1e08d551adc9f2b 106 PANTHER PTHR30388 1 106 4.1E-32 T 13-09-2016 PMA3_RS13610 daab8bce34017595b1e08d551adc9f2b 106 PANTHER PTHR30388:SF4 1 106 4.1E-32 T 13-09-2016 PMA3_RS07325 095988db1645b49c65fa21445b75700a 299 Pfam PF00950 ABC 3 transport family 25 286 2.9E-52 T 13-09-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 PMA3_RS07325 095988db1645b49c65fa21445b75700a 299 SUPERFAMILY SSF81345 18 282 4.97E-33 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS07325 095988db1645b49c65fa21445b75700a 299 Gene3D G3DSA:1.10.3470.10 63 287 2.5E-13 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS07325 095988db1645b49c65fa21445b75700a 299 PANTHER PTHR30477 16 298 5.1E-85 T 13-09-2016 PMA3_RS07325 095988db1645b49c65fa21445b75700a 299 PANTHER PTHR30477:SF0 16 298 5.1E-85 T 13-09-2016 PMA3_RS11605 008382596c31a9776fdee6f19865df47 907 Gene3D G3DSA:3.30.20.10 795 844 2.2E-6 T 13-09-2016 PMA3_RS11605 008382596c31a9776fdee6f19865df47 907 ProSitePatterns PS00018 EF-hand calcium-binding domain. 559 571 - T 13-09-2016 IPR018247 EF-Hand 1, calcium-binding site PMA3_RS11605 008382596c31a9776fdee6f19865df47 907 PANTHER PTHR34408 683 728 2.4E-13 T 13-09-2016 PMA3_RS11605 008382596c31a9776fdee6f19865df47 907 PANTHER PTHR34408 772 905 2.4E-13 T 13-09-2016 PMA3_RS11605 008382596c31a9776fdee6f19865df47 907 SUPERFAMILY SSF53955 786 897 2.0E-21 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS11605 008382596c31a9776fdee6f19865df47 907 SUPERFAMILY SSF53955 688 744 2.0E-21 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 PANTHER PTHR30126 2 298 7.6E-139 T 13-09-2016 PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.0E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.0E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.0E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 Gene3D G3DSA:1.10.10.10 5 84 1.5E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 Pfam PF03466 LysR substrate binding domain 91 291 9.1E-29 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 93 103 - T 13-09-2016 IPR019793 Peroxidases heam-ligand binding site PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 PANTHER PTHR30126:SF2 2 298 7.6E-139 T 13-09-2016 PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 SUPERFAMILY SSF46785 5 89 4.02E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 Gene3D G3DSA:3.40.190.10 200 262 2.7E-8 T 13-09-2016 PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 Gene3D G3DSA:3.40.190.10 85 199 1.3E-9 T 13-09-2016 PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.7E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29755 51ffa7d3d026d97d991a4b0a719e5fd4 303 SUPERFAMILY SSF53850 89 280 1.47E-23 T 13-09-2016 PMA3_RS03905 949e5edae968f35c9ce7f27c2736b532 207 SUPERFAMILY SSF143081 2 202 1.06E-48 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS03905 949e5edae968f35c9ce7f27c2736b532 207 Pfam PF02586 SOS response associated peptidase (SRAP) 1 194 4.5E-39 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS03905 949e5edae968f35c9ce7f27c2736b532 207 Gene3D G3DSA:3.90.1680.10 1 206 2.1E-44 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS03905 949e5edae968f35c9ce7f27c2736b532 207 PANTHER PTHR13604 2 206 6.8E-44 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS06125 1603d72ad709e0332a6a3f2ee5aed98b 219 Pfam PF01841 Transglutaminase-like superfamily 21 136 9.3E-13 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS06125 1603d72ad709e0332a6a3f2ee5aed98b 219 SUPERFAMILY SSF54001 12 168 3.36E-19 T 13-09-2016 PMA3_RS02865 dab869445b490a7b80da0bedf5e65591 159 PANTHER PTHR35458:SF2 1 156 4.9E-60 T 13-09-2016 PMA3_RS02865 dab869445b490a7b80da0bedf5e65591 159 Pfam PF01936 NYN domain 3 151 6.4E-37 T 13-09-2016 IPR021139 NYN domain, limkain-b1-type PMA3_RS02865 dab869445b490a7b80da0bedf5e65591 159 PANTHER PTHR35458 1 156 4.9E-60 T 13-09-2016 PMA3_RS02865 dab869445b490a7b80da0bedf5e65591 159 Gene3D G3DSA:3.40.50.1010 2 152 6.2E-45 T 13-09-2016 IPR029060 PIN domain-like PMA3_RS07090 f5b62e35a64576f9d3676b54029cdc6d 153 SMART SM00347 32 134 6.4E-16 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS07090 f5b62e35a64576f9d3676b54029cdc6d 153 PANTHER PTHR33164:SF5 2 153 9.7E-54 T 13-09-2016 PMA3_RS07090 f5b62e35a64576f9d3676b54029cdc6d 153 Pfam PF01047 MarR family 39 102 1.2E-12 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS07090 f5b62e35a64576f9d3676b54029cdc6d 153 PANTHER PTHR33164 2 153 9.7E-54 T 13-09-2016 PMA3_RS07090 f5b62e35a64576f9d3676b54029cdc6d 153 Gene3D G3DSA:1.10.10.10 7 150 7.0E-36 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07090 f5b62e35a64576f9d3676b54029cdc6d 153 SUPERFAMILY SSF46785 10 146 2.57E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05080 a44b73ff9da27d0d3656a47c3a27b0f7 425 Pfam PF06057 Bacterial virulence protein (VirJ) 234 422 1.8E-75 T 13-09-2016 IPR010333 Bacterial virulence PMA3_RS05080 a44b73ff9da27d0d3656a47c3a27b0f7 425 PIRSF PIRSF029063 1 425 3.7E-126 T 13-09-2016 IPR011225 Type IV secretory pathway, VirJ component PMA3_RS05080 a44b73ff9da27d0d3656a47c3a27b0f7 425 Gene3D G3DSA:3.40.50.1820 217 339 2.9E-9 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS05080 a44b73ff9da27d0d3656a47c3a27b0f7 425 SUPERFAMILY SSF53474 223 420 1.39E-22 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18555 6ade3e444c1e5784e7ac57ac9a7cb1e5 311 Pfam PF13557 Putative MetA-pathway of phenol degradation 64 307 1.1E-56 T 13-09-2016 IPR025737 MetA-pathway of phenol degradation, putative PMA3_RS24970 426c3d380c12cc0f204a2821eb83c36f 300 Gene3D G3DSA:3.40.1130.10 44 196 6.4E-10 T 13-09-2016 PMA3_RS24970 426c3d380c12cc0f204a2821eb83c36f 300 PANTHER PTHR10983 11 296 7.4E-120 T 13-09-2016 PMA3_RS24970 426c3d380c12cc0f204a2821eb83c36f 300 SMART SM00563 88 230 5.3E-17 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS24970 426c3d380c12cc0f204a2821eb83c36f 300 Pfam PF01553 Acyltransferase 76 201 1.8E-16 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS24970 426c3d380c12cc0f204a2821eb83c36f 300 SUPERFAMILY SSF69593 14 283 1.83E-38 T 13-09-2016 PMA3_RS24970 426c3d380c12cc0f204a2821eb83c36f 300 PANTHER PTHR10983:SF15 11 296 7.4E-120 T 13-09-2016 PMA3_RS07875 d360f048b674896d8671192b03623385 302 PANTHER PTHR18895 1 290 2.6E-156 T 13-09-2016 PMA3_RS07875 d360f048b674896d8671192b03623385 302 Gene3D G3DSA:3.40.50.150 101 283 3.4E-54 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS07875 d360f048b674896d8671192b03623385 302 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 13-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PMA3_RS07875 d360f048b674896d8671192b03623385 302 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 6 287 2.9E-127 T 13-09-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PMA3_RS07875 d360f048b674896d8671192b03623385 302 PANTHER PTHR18895:SF66 1 290 2.6E-156 T 13-09-2016 PMA3_RS07875 d360f048b674896d8671192b03623385 302 Gene3D G3DSA:1.10.8.10 8 99 2.1E-11 T 13-09-2016 PMA3_RS07875 d360f048b674896d8671192b03623385 302 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 8 287 3.0E-82 T 13-09-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PMA3_RS07875 d360f048b674896d8671192b03623385 302 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 293 51.021 T 13-09-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PMA3_RS07875 d360f048b674896d8671192b03623385 302 Pfam PF05175 Methyltransferase small domain 127 207 9.4E-17 T 13-09-2016 IPR007848 Methyltransferase small domain GO:0008168 PMA3_RS07875 d360f048b674896d8671192b03623385 302 PIRSF PIRSF037167 1 300 1.8E-135 T 13-09-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PMA3_RS07875 d360f048b674896d8671192b03623385 302 SUPERFAMILY SSF53335 9 287 7.19E-56 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS00420 272be6f3091d950273370e4e87a0638d 81 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 2.6E-32 T 13-09-2016 IPR021250 Protein of unknown function DUF2789 PMA3_RS20390 e839a4ca02ac40da6467145116c03c9e 339 Gene3D G3DSA:3.20.20.70 1 337 9.7E-125 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS20390 e839a4ca02ac40da6467145116c03c9e 339 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 13-09-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 PMA3_RS20390 e839a4ca02ac40da6467145116c03c9e 339 Pfam PF01180 Dihydroorotate dehydrogenase 46 332 1.5E-88 T 13-09-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PMA3_RS20390 e839a4ca02ac40da6467145116c03c9e 339 PIRSF PIRSF000164 16 339 1.9E-94 T 13-09-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 PMA3_RS20390 e839a4ca02ac40da6467145116c03c9e 339 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 337 1.7E-132 T 13-09-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS20390 e839a4ca02ac40da6467145116c03c9e 339 PANTHER PTHR11938 44 330 2.4E-91 T 13-09-2016 PMA3_RS20390 e839a4ca02ac40da6467145116c03c9e 339 SUPERFAMILY SSF51395 1 335 4.76E-104 T 13-09-2016 PMA3_RS20390 e839a4ca02ac40da6467145116c03c9e 339 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 50.802 T 13-09-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PMA3_RS20010 3a9b8f9e525c03f0bd731ab44914cfd1 166 PANTHER PTHR30173:SF30 11 162 2.7E-40 T 13-09-2016 PMA3_RS20010 3a9b8f9e525c03f0bd731ab44914cfd1 166 Pfam PF08281 Sigma-70, region 4 106 157 1.5E-12 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20010 3a9b8f9e525c03f0bd731ab44914cfd1 166 Pfam PF04542 Sigma-70 region 2 14 76 1.7E-10 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20010 3a9b8f9e525c03f0bd731ab44914cfd1 166 Gene3D G3DSA:1.10.1740.10 13 76 1.5E-11 T 13-09-2016 PMA3_RS20010 3a9b8f9e525c03f0bd731ab44914cfd1 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 161 2.4E-24 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20010 3a9b8f9e525c03f0bd731ab44914cfd1 166 SUPERFAMILY SSF88659 89 162 7.29E-15 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20010 3a9b8f9e525c03f0bd731ab44914cfd1 166 PANTHER PTHR30173 11 162 2.7E-40 T 13-09-2016 PMA3_RS20010 3a9b8f9e525c03f0bd731ab44914cfd1 166 SUPERFAMILY SSF88946 11 71 1.22E-11 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS20010 3a9b8f9e525c03f0bd731ab44914cfd1 166 Gene3D G3DSA:1.10.10.10 103 162 8.5E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 PANTHER PTHR32303 130 504 1.4E-157 T 13-09-2016 PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 PANTHER PTHR32303 574 687 1.4E-157 T 13-09-2016 PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 PANTHER PTHR32303 704 784 1.4E-157 T 13-09-2016 PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 SMART SM00564 707 739 0.058 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 SMART SM00564 614 678 270.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 SMART SM00564 220 251 8.2E-5 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 SMART SM00564 404 454 17.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 SMART SM00564 278 310 320.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 SMART SM00564 335 376 0.27 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 17 784 0.0 T 13-09-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 SUPERFAMILY SSF50998 555 770 1.19E-145 T 13-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 SUPERFAMILY SSF50998 164 518 1.19E-145 T 13-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 Pfam PF13360 PQQ-like domain 217 451 6.4E-12 T 13-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 Gene3D G3DSA:2.140.10.10 566 785 6.3E-152 T 13-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 Gene3D G3DSA:2.140.10.10 161 530 6.3E-152 T 13-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 PANTHER PTHR32303:SF4 130 504 1.4E-157 T 13-09-2016 PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 PANTHER PTHR32303:SF4 574 687 1.4E-157 T 13-09-2016 PMA3_RS27690 8b38715c8570a2f353f079aa16129168 785 PANTHER PTHR32303:SF4 704 784 1.4E-157 T 13-09-2016 PMA3_RS12440 0489d5e3e941ce869445c3dc3da1cde7 80 SUPERFAMILY SSF52833 2 76 5.89E-18 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS12440 0489d5e3e941ce869445c3dc3da1cde7 80 PANTHER PTHR36450 2 80 3.1E-28 T 13-09-2016 PMA3_RS12440 0489d5e3e941ce869445c3dc3da1cde7 80 PIRSF PIRSF037031 1 78 1.2E-30 T 13-09-2016 IPR005243 Redox-active disulphide protein 2 PMA3_RS12440 0489d5e3e941ce869445c3dc3da1cde7 80 Pfam PF13192 Thioredoxin domain 3 76 4.0E-26 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS12440 0489d5e3e941ce869445c3dc3da1cde7 80 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 76 1.4E-22 T 13-09-2016 IPR005243 Redox-active disulphide protein 2 PMA3_RS12440 0489d5e3e941ce869445c3dc3da1cde7 80 PANTHER PTHR36450:SF1 2 80 3.1E-28 T 13-09-2016 PMA3_RS12440 0489d5e3e941ce869445c3dc3da1cde7 80 Gene3D G3DSA:3.40.30.10 2 76 6.2E-27 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS19105 fc98586c6fd7e5d109ea6224b0429fbe 377 Gene3D G3DSA:3.90.1150.10 268 374 5.4E-10 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS19105 fc98586c6fd7e5d109ea6224b0429fbe 377 PANTHER PTHR21152 24 374 2.7E-73 T 13-09-2016 PMA3_RS19105 fc98586c6fd7e5d109ea6224b0429fbe 377 SUPERFAMILY SSF53383 7 373 1.61E-74 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS19105 fc98586c6fd7e5d109ea6224b0429fbe 377 PIRSF PIRSF000524 18 377 6.0E-43 T 13-09-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PMA3_RS19105 fc98586c6fd7e5d109ea6224b0429fbe 377 Pfam PF00266 Aminotransferase class-V 22 294 8.3E-14 T 13-09-2016 IPR000192 Aminotransferase class V domain PMA3_RS19105 fc98586c6fd7e5d109ea6224b0429fbe 377 PANTHER PTHR21152:SF21 24 374 2.7E-73 T 13-09-2016 PMA3_RS19105 fc98586c6fd7e5d109ea6224b0429fbe 377 Gene3D G3DSA:3.40.640.10 21 267 3.1E-46 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS14575 7c1f42b669770dc4672c43279229807e 178 Gene3D G3DSA:3.40.30.10 16 170 1.1E-40 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS14575 7c1f42b669770dc4672c43279229807e 178 Pfam PF00578 AhpC/TSA family 24 147 4.5E-34 T 13-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS14575 7c1f42b669770dc4672c43279229807e 178 SUPERFAMILY SSF52833 21 169 5.95E-45 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS14575 7c1f42b669770dc4672c43279229807e 178 PIRSF PIRSF000239 18 178 1.6E-24 T 13-09-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PMA3_RS14575 7c1f42b669770dc4672c43279229807e 178 PANTHER PTHR10681 16 169 1.3E-40 T 13-09-2016 PMA3_RS08305 695e2b81ce533f29d854012c7ab91b0a 383 PANTHER PTHR12756:SF18 8 299 4.2E-128 T 13-09-2016 PMA3_RS08305 695e2b81ce533f29d854012c7ab91b0a 383 SMART SM00631 117 343 0.0026 T 13-09-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PMA3_RS08305 695e2b81ce533f29d854012c7ab91b0a 383 SUPERFAMILY SSF53187 113 380 4.3E-54 T 13-09-2016 PMA3_RS08305 695e2b81ce533f29d854012c7ab91b0a 383 Gene3D G3DSA:3.40.630.10 110 349 1.0E-37 T 13-09-2016 PMA3_RS08305 695e2b81ce533f29d854012c7ab91b0a 383 Pfam PF00246 Zinc carboxypeptidase 138 313 2.4E-19 T 13-09-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PMA3_RS08305 695e2b81ce533f29d854012c7ab91b0a 383 PANTHER PTHR12756 8 299 4.2E-128 T 13-09-2016 PMA3_RS23785 934b4aa3fef4fa50812f691f0c14ffda 113 PIRSF PIRSF005894 1 107 3.6E-45 T 13-09-2016 IPR014434 Monothiol glutaredoxin PMA3_RS23785 934b4aa3fef4fa50812f691f0c14ffda 113 PANTHER PTHR10293 1 100 8.0E-49 T 13-09-2016 IPR004480 Monothiol glutaredoxin-related PMA3_RS23785 934b4aa3fef4fa50812f691f0c14ffda 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.3E-43 T 13-09-2016 IPR004480 Monothiol glutaredoxin-related PMA3_RS23785 934b4aa3fef4fa50812f691f0c14ffda 113 Gene3D G3DSA:3.40.30.10 7 101 1.8E-28 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS23785 934b4aa3fef4fa50812f691f0c14ffda 113 Pfam PF00462 Glutaredoxin 16 80 2.3E-17 T 13-09-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PMA3_RS23785 934b4aa3fef4fa50812f691f0c14ffda 113 SUPERFAMILY SSF52833 1 100 4.48E-30 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 294 3.9E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 Gene3D G3DSA:1.10.287.130 226 280 1.9E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 SUPERFAMILY SSF158472 180 233 6.28E-7 T 13-09-2016 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 Gene3D G3DSA:3.30.565.10 281 439 1.8E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 PANTHER PTHR24423:SF477 178 446 5.9E-58 T 13-09-2016 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 1.6E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 1.6E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 1.6E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 PANTHER PTHR24423 178 446 5.9E-58 T 13-09-2016 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 SUPERFAMILY SSF47384 220 294 6.67E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 439 3.6E-14 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 Pfam PF00672 HAMP domain 165 231 6.6E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 SMART SM00387 340 446 2.8E-22 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 SMART SM00388 236 295 1.7E-12 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 Pfam PF16750 Sensor domain of 2-component histidine kinase 44 151 6.5E-33 T 13-09-2016 IPR031930 2-component histidine kinase, sensor domain PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 SMART SM00304 180 235 1.7E-9 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS05935 7e010352c1e4981b222559a2670f7b5b 474 SUPERFAMILY SSF55874 285 438 7.07E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11680 6c829a3a01954b63c1f73b9f0afa7bda 361 PANTHER PTHR22893 1 358 6.1E-138 T 13-09-2016 PMA3_RS11680 6c829a3a01954b63c1f73b9f0afa7bda 361 PANTHER PTHR22893:SF14 1 358 6.1E-138 T 13-09-2016 PMA3_RS11680 6c829a3a01954b63c1f73b9f0afa7bda 361 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 330 9.1E-74 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS11680 6c829a3a01954b63c1f73b9f0afa7bda 361 Gene3D G3DSA:3.20.20.70 2 351 1.1E-111 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS11680 6c829a3a01954b63c1f73b9f0afa7bda 361 SUPERFAMILY SSF51395 1 354 4.35E-105 T 13-09-2016 PMA3_RS06140 0a7280740e6b0d3e7bcd047b8fc48d70 259 PIRSF PIRSF006648 2 255 4.4E-24 T 13-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PMA3_RS06140 0a7280740e6b0d3e7bcd047b8fc48d70 259 Pfam PF01061 ABC-2 type transporter 13 221 3.3E-40 T 13-09-2016 IPR013525 ABC-2 type transporter GO:0016020 PMA3_RS06140 0a7280740e6b0d3e7bcd047b8fc48d70 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 142 166 2.5E-10 T 13-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PMA3_RS06140 0a7280740e6b0d3e7bcd047b8fc48d70 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 61 83 2.5E-10 T 13-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PMA3_RS06140 0a7280740e6b0d3e7bcd047b8fc48d70 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 2.5E-10 T 13-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PMA3_RS06140 0a7280740e6b0d3e7bcd047b8fc48d70 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 179 198 2.5E-10 T 13-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PMA3_RS06140 0a7280740e6b0d3e7bcd047b8fc48d70 259 PANTHER PTHR30413:SF2 1 258 2.9E-149 T 13-09-2016 PMA3_RS06140 0a7280740e6b0d3e7bcd047b8fc48d70 259 PANTHER PTHR30413 1 258 2.9E-149 T 13-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PMA3_RS00160 f47fd67bf72114c37a26869fc331f5cf 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 1.3E-26 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS00160 f47fd67bf72114c37a26869fc331f5cf 216 Gene3D G3DSA:1.10.150.240 17 75 3.9E-24 T 13-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PMA3_RS00160 f47fd67bf72114c37a26869fc331f5cf 216 PANTHER PTHR18901 1 213 2.8E-84 T 13-09-2016 PMA3_RS00160 f47fd67bf72114c37a26869fc331f5cf 216 PANTHER PTHR18901:SF23 1 213 2.8E-84 T 13-09-2016 PMA3_RS00160 f47fd67bf72114c37a26869fc331f5cf 216 SUPERFAMILY SSF56784 1 213 9.34E-53 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS00160 f47fd67bf72114c37a26869fc331f5cf 216 Gene3D G3DSA:3.40.50.1000 76 212 7.6E-38 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 428 28.838 T 13-09-2016 IPR026593 Protein translocase subunit SecY PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 SUPERFAMILY SSF103491 15 419 3.53E-127 T 13-09-2016 IPR023201 SecY subunit domain PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 Pfam PF00344 SecY translocase 75 412 1.4E-114 T 13-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 Gene3D G3DSA:1.10.3370.10 16 432 7.6E-160 T 13-09-2016 IPR023201 SecY subunit domain PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 3.6E-89 T 13-09-2016 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 3.6E-89 T 13-09-2016 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 3.6E-89 T 13-09-2016 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 3.6E-89 T 13-09-2016 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 3.6E-89 T 13-09-2016 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 3.6E-89 T 13-09-2016 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 3.6E-89 T 13-09-2016 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 3.6E-89 T 13-09-2016 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 3.6E-89 T 13-09-2016 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PANTHER PTHR10906 15 442 1.8E-221 T 13-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PIRSF PIRSF004557 9 436 2.7E-118 T 13-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 PANTHER PTHR10906:SF2 15 442 1.8E-221 T 13-09-2016 PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 13-09-2016 IPR030659 SecY conserved site PMA3_RS27165 f7e15c93072fbee1afdbf05431302ab5 442 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 424 3.6E-128 T 13-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PMA3_RS21425 86f3484591ef0e5970d231846c765c6e 239 SUPERFAMILY SSF52540 4 227 1.08E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21425 86f3484591ef0e5970d231846c765c6e 239 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS21425 86f3484591ef0e5970d231846c765c6e 239 Pfam PF00005 ABC transporter 27 181 9.0E-26 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS21425 86f3484591ef0e5970d231846c765c6e 239 PANTHER PTHR24220:SF380 6 239 2.2E-116 T 13-09-2016 PMA3_RS21425 86f3484591ef0e5970d231846c765c6e 239 Gene3D G3DSA:3.40.50.300 3 226 1.1E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21425 86f3484591ef0e5970d231846c765c6e 239 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 40 53 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS21425 86f3484591ef0e5970d231846c765c6e 239 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 4 226 5.0E-107 T 13-09-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 PMA3_RS21425 86f3484591ef0e5970d231846c765c6e 239 SMART SM00382 36 229 2.6E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS21425 86f3484591ef0e5970d231846c765c6e 239 PANTHER PTHR24220 6 239 2.2E-116 T 13-09-2016 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 PANTHER PTHR11739 34 428 5.8E-199 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 PIRSF PIRSF001369 37 429 8.7E-176 T 13-09-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 Gene3D G3DSA:1.10.230.10 281 373 1.7E-40 T 13-09-2016 IPR016143 Citrate synthase-like, small alpha subdomain PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 PRINTS PR00143 Citrate synthase signature 296 316 3.7E-56 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 PRINTS PR00143 Citrate synthase signature 360 376 3.7E-56 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 PRINTS PR00143 Citrate synthase signature 165 178 3.7E-56 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 PRINTS PR00143 Citrate synthase signature 219 234 3.7E-56 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 PRINTS PR00143 Citrate synthase signature 380 394 3.7E-56 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 PRINTS PR00143 Citrate synthase signature 241 269 3.7E-56 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 1.2E-133 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 Gene3D G3DSA:1.10.580.10 52 280 7.3E-101 T 13-09-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 1.6E-239 T 13-09-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 13-09-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 PMA3_RS21285 241ab1c55b6257c6b77c47c848b66d31 429 SUPERFAMILY SSF48256 6 428 1.44E-166 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS18050 503c09a4a3c5ccdba44d8fbc7e4cb0e0 132 Pfam PF08905 Domain of unknown function (DUF1850) 21 106 3.7E-24 T 13-09-2016 IPR015001 Protein of unknown function DUF1850 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 295 61.564 T 13-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 Gene3D G3DSA:3.30.930.10 7 216 4.7E-107 T 13-09-2016 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 301 1.7E-162 T 13-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 PANTHER PTHR30075 8 316 1.9E-260 T 13-09-2016 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 Gene3D G3DSA:1.20.58.180 217 300 4.6E-35 T 13-09-2016 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 292 1.6E-150 T 13-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 SUPERFAMILY SSF55681 10 293 1.91E-134 T 13-09-2016 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 3.2E-68 T 13-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 3.2E-68 T 13-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 3.2E-68 T 13-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 255 271 3.2E-68 T 13-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 3.2E-68 T 13-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS30140 22a5745aff4dde67282073b34a6d43ec 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 3.2E-68 T 13-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 SUPERFAMILY SSF88659 124 187 1.61E-17 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 Gene3D G3DSA:1.10.1740.10 2 111 3.1E-38 T 13-09-2016 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 3 190 1.6E-97 T 13-09-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 13-09-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 Pfam PF04542 Sigma-70 region 2 25 92 9.1E-18 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 4.6E-30 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 SUPERFAMILY SSF88946 1 108 4.71E-33 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 PANTHER PTHR30173 1 187 4.2E-56 T 13-09-2016 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 Pfam PF08281 Sigma-70, region 4 132 181 2.4E-18 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 PANTHER PTHR30173:SF1 1 187 4.2E-56 T 13-09-2016 PMA3_RS22545 3263ce7c336c7e5a2fcb9ed6d0977126 193 Gene3D G3DSA:1.10.10.10 123 188 6.0E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12085 0effccdd6d7c22f0375c6af37e2cb89c 398 SUPERFAMILY SSF51556 54 359 5.02E-78 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS12085 0effccdd6d7c22f0375c6af37e2cb89c 398 Pfam PF07969 Amidohydrolase family 106 387 1.2E-21 T 13-09-2016 IPR013108 Amidohydrolase 3 PMA3_RS12085 0effccdd6d7c22f0375c6af37e2cb89c 398 Gene3D G3DSA:2.30.40.10 15 61 3.3E-7 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS12085 0effccdd6d7c22f0375c6af37e2cb89c 398 PANTHER PTHR32027:SF9 39 391 8.1E-103 T 13-09-2016 PMA3_RS12085 0effccdd6d7c22f0375c6af37e2cb89c 398 Gene3D G3DSA:3.20.20.140 62 349 1.5E-97 T 13-09-2016 PMA3_RS12085 0effccdd6d7c22f0375c6af37e2cb89c 398 PANTHER PTHR32027 39 391 8.1E-103 T 13-09-2016 PMA3_RS12085 0effccdd6d7c22f0375c6af37e2cb89c 398 SUPERFAMILY SSF51338 18 67 3.6E-5 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19095 d5200c2ff044278e3313a24dde770e87 275 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 72 206 1.5E-12 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS19095 d5200c2ff044278e3313a24dde770e87 275 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 8 260 1.8E-110 T 13-09-2016 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 PMA3_RS19095 d5200c2ff044278e3313a24dde770e87 275 Gene3D G3DSA:3.40.50.1000 107 261 9.8E-31 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS19095 d5200c2ff044278e3313a24dde770e87 275 Gene3D G3DSA:3.40.50.1000 7 27 9.8E-31 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS19095 d5200c2ff044278e3313a24dde770e87 275 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 275 136.002 T 13-09-2016 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 PMA3_RS19095 d5200c2ff044278e3313a24dde770e87 275 Gene3D G3DSA:1.10.150.240 28 102 1.7E-34 T 13-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PMA3_RS19095 d5200c2ff044278e3313a24dde770e87 275 Pfam PF13419 Haloacid dehalogenase-like hydrolase 29 206 9.6E-7 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS19095 d5200c2ff044278e3313a24dde770e87 275 SUPERFAMILY SSF56784 9 263 1.75E-56 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS19095 d5200c2ff044278e3313a24dde770e87 275 PANTHER PTHR18901:SF45 3 273 8.5E-115 T 13-09-2016 PMA3_RS19095 d5200c2ff044278e3313a24dde770e87 275 PANTHER PTHR18901 3 273 8.5E-115 T 13-09-2016 PMA3_RS23695 6dff1cda1626c0b60e37d039ed3c3cc6 364 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 342 2.2E-100 T 13-09-2016 IPR019591 Mrp/NBP35 ATP-binding protein PMA3_RS23695 6dff1cda1626c0b60e37d039ed3c3cc6 364 SUPERFAMILY SSF117916 5 86 9.81E-15 T 13-09-2016 PMA3_RS23695 6dff1cda1626c0b60e37d039ed3c3cc6 364 Gene3D G3DSA:3.40.50.300 90 341 2.1E-106 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23695 6dff1cda1626c0b60e37d039ed3c3cc6 364 SUPERFAMILY SSF52540 100 348 3.0E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23695 6dff1cda1626c0b60e37d039ed3c3cc6 364 Pfam PF01883 Domain of unknown function DUF59 6 77 2.1E-17 T 13-09-2016 IPR002744 Domain of unknown function DUF59 PMA3_RS23695 6dff1cda1626c0b60e37d039ed3c3cc6 364 PANTHER PTHR23264 1 354 1.1E-159 T 13-09-2016 IPR019591 Mrp/NBP35 ATP-binding protein PMA3_RS23695 6dff1cda1626c0b60e37d039ed3c3cc6 364 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 343 37.24 T 13-09-2016 IPR019591 Mrp/NBP35 ATP-binding protein PMA3_RS23695 6dff1cda1626c0b60e37d039ed3c3cc6 364 PANTHER PTHR23264:SF19 1 354 1.1E-159 T 13-09-2016 PMA3_RS23695 6dff1cda1626c0b60e37d039ed3c3cc6 364 ProSitePatterns PS01215 Mrp family signature. 206 222 - T 13-09-2016 IPR000808 Mrp, conserved site GO:0005524 PMA3_RS18085 97da00037b706bd0a9870e2bd51b4c51 134 SUPERFAMILY SSF143744 2 129 1.14E-35 T 13-09-2016 PMA3_RS18085 97da00037b706bd0a9870e2bd51b4c51 134 PANTHER PTHR34309:SF1 1 134 1.7E-27 T 13-09-2016 PMA3_RS18085 97da00037b706bd0a9870e2bd51b4c51 134 Pfam PF03928 Haem-degrading 2 125 2.4E-29 T 13-09-2016 IPR005624 Haem-degrading PMA3_RS18085 97da00037b706bd0a9870e2bd51b4c51 134 PANTHER PTHR34309 1 134 1.7E-27 T 13-09-2016 PMA3_RS13125 c383df567b0e4dc729ef926c8ba7e6c8 105 Pfam PF05957 Bacterial protein of unknown function (DUF883) 18 105 3.0E-22 T 13-09-2016 IPR010279 Protein of unknown function DUF883, ElaB PMA3_RS13125 c383df567b0e4dc729ef926c8ba7e6c8 105 PANTHER PTHR35893:SF3 6 105 2.3E-29 T 13-09-2016 PMA3_RS13125 c383df567b0e4dc729ef926c8ba7e6c8 105 PANTHER PTHR35893 6 105 2.3E-29 T 13-09-2016 PMA3_RS20830 767d63303a4f2446f72569af6a80d75a 185 PANTHER PTHR30328:SF18 1 177 2.1E-36 T 13-09-2016 PMA3_RS20830 767d63303a4f2446f72569af6a80d75a 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.1E-5 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS20830 767d63303a4f2446f72569af6a80d75a 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.1E-5 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS20830 767d63303a4f2446f72569af6a80d75a 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 3.7E-9 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS20830 767d63303a4f2446f72569af6a80d75a 185 SUPERFAMILY SSF46689 2 83 2.31E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20830 767d63303a4f2446f72569af6a80d75a 185 Gene3D G3DSA:1.10.357.10 59 180 7.5E-26 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS20830 767d63303a4f2446f72569af6a80d75a 185 Gene3D G3DSA:1.10.10.60 3 58 4.1E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20830 767d63303a4f2446f72569af6a80d75a 185 SUPERFAMILY SSF48498 81 180 7.91E-19 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS20830 767d63303a4f2446f72569af6a80d75a 185 PANTHER PTHR30328 1 177 2.1E-36 T 13-09-2016 PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 PANTHER PTHR23501:SF51 7 528 2.9E-170 T 13-09-2016 PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 PANTHER PTHR23501 7 528 2.9E-170 T 13-09-2016 PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 Gene3D G3DSA:1.20.1250.20 277 439 2.5E-16 T 13-09-2016 PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 Gene3D G3DSA:1.20.1250.20 498 518 2.5E-16 T 13-09-2016 PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 PRINTS PR01036 Tetracycline resistance protein TetB signature 28 52 1.8E-5 T 13-09-2016 PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 PRINTS PR01036 Tetracycline resistance protein TetB signature 149 173 1.8E-5 T 13-09-2016 PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 PRINTS PR01036 Tetracycline resistance protein TetB signature 174 198 1.8E-5 T 13-09-2016 PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 SUPERFAMILY SSF103473 17 204 8.63E-56 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 SUPERFAMILY SSF103473 262 433 8.63E-56 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 SUPERFAMILY SSF103473 492 518 8.63E-56 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 Gene3D G3DSA:1.20.1250.20 24 200 1.7E-24 T 13-09-2016 PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 24 508 5.9E-117 T 13-09-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 PMA3_RS20045 c37b68a3c5ea39b0f1ee5054201bb10b 530 Pfam PF07690 Major Facilitator Superfamily 30 423 3.7E-39 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 Pfam PF03466 LysR substrate binding domain 89 272 3.4E-18 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 Gene3D G3DSA:1.10.10.10 1 82 1.5E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.3E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 PANTHER PTHR30126 1 287 5.6E-131 T 13-09-2016 PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 Gene3D G3DSA:3.40.190.10 85 193 2.5E-10 T 13-09-2016 PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 SUPERFAMILY SSF46785 1 105 1.11E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.7E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.7E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.7E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 SUPERFAMILY SSF53850 89 275 1.59E-20 T 13-09-2016 PMA3_RS12180 16b487e68bc138676c4ef91a43df6c1f 287 PANTHER PTHR30126:SF21 1 287 5.6E-131 T 13-09-2016 PMA3_RS27585 cae9760c1f5a53af6c5ba7e2f4aa231c 640 PANTHER PTHR30267:SF2 1 640 1.8E-284 T 13-09-2016 PMA3_RS27585 cae9760c1f5a53af6c5ba7e2f4aa231c 640 SMART SM00763 19 376 6.6E-213 T 13-09-2016 IPR013153 PrkA AAA domain PMA3_RS27585 cae9760c1f5a53af6c5ba7e2f4aa231c 640 Gene3D G3DSA:3.40.50.300 75 154 2.6E-7 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27585 cae9760c1f5a53af6c5ba7e2f4aa231c 640 Gene3D G3DSA:3.40.50.300 239 325 2.6E-7 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27585 cae9760c1f5a53af6c5ba7e2f4aa231c 640 SUPERFAMILY SSF52540 75 363 3.58E-15 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27585 cae9760c1f5a53af6c5ba7e2f4aa231c 640 PANTHER PTHR30267 1 640 1.8E-284 T 13-09-2016 PMA3_RS27585 cae9760c1f5a53af6c5ba7e2f4aa231c 640 PIRSF PIRSF000549 1 640 4.8E-285 T 13-09-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 PMA3_RS27585 cae9760c1f5a53af6c5ba7e2f4aa231c 640 Pfam PF08298 PrkA AAA domain 20 376 1.2E-179 T 13-09-2016 IPR013153 PrkA AAA domain PMA3_RS27585 cae9760c1f5a53af6c5ba7e2f4aa231c 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 3.0E-75 T 13-09-2016 IPR010650 PrkA C-terminal domain PMA3_RS17630 b3cfbe6d8eb807b773c19ed403a044b9 568 Gene3D G3DSA:3.30.450.90 159 285 5.9E-42 T 13-09-2016 PMA3_RS17630 b3cfbe6d8eb807b773c19ed403a044b9 568 Pfam PF00437 Type II/IV secretion system protein 188 456 1.2E-71 T 13-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PMA3_RS17630 b3cfbe6d8eb807b773c19ed403a044b9 568 PANTHER PTHR30258:SF2 172 565 3.8E-162 T 13-09-2016 PMA3_RS17630 b3cfbe6d8eb807b773c19ed403a044b9 568 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 385 399 - T 13-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PMA3_RS17630 b3cfbe6d8eb807b773c19ed403a044b9 568 PANTHER PTHR30258 172 565 3.8E-162 T 13-09-2016 PMA3_RS17630 b3cfbe6d8eb807b773c19ed403a044b9 568 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 54 144 9.7E-8 T 13-09-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 PMA3_RS17630 b3cfbe6d8eb807b773c19ed403a044b9 568 SUPERFAMILY SSF160246 20 129 2.59E-6 T 13-09-2016 PMA3_RS17630 b3cfbe6d8eb807b773c19ed403a044b9 568 Gene3D G3DSA:3.40.50.300 296 565 5.4E-97 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17630 b3cfbe6d8eb807b773c19ed403a044b9 568 SUPERFAMILY SSF52540 175 565 1.46E-93 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 PANTHER PTHR31637:SF0 1 509 9.4E-285 T 13-09-2016 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 PIRSF PIRSF001492 1 509 2.0E-205 T 13-09-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 Gene3D G3DSA:3.40.1450.10 80 306 5.2E-95 T 13-09-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 Pfam PF01676 Metalloenzyme superfamily 6 498 8.2E-82 T 13-09-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 509 50.969 T 13-09-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 PANTHER PTHR31637 1 509 9.4E-285 T 13-09-2016 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 508 6.2E-234 T 13-09-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 Gene3D G3DSA:3.40.720.10 312 508 5.8E-86 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 Gene3D G3DSA:3.40.720.10 6 79 5.8E-86 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 SUPERFAMILY SSF53649 5 79 4.58E-75 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 SUPERFAMILY SSF53649 308 508 4.58E-75 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 SUPERFAMILY SSF64158 79 305 7.59E-84 T 13-09-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PMA3_RS01130 1248b5da6cdfc74b0472484780871334 509 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 296 1.5E-81 T 13-09-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PMA3_RS26370 6c7e699d8b35ff0a1a547d1b7c6c1990 472 PANTHER PTHR11699 9 468 2.4E-172 T 13-09-2016 PMA3_RS26370 6c7e699d8b35ff0a1a547d1b7c6c1990 472 SUPERFAMILY SSF53720 15 469 1.7E-130 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS26370 6c7e699d8b35ff0a1a547d1b7c6c1990 472 Gene3D G3DSA:3.40.605.10 13 258 8.5E-70 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26370 6c7e699d8b35ff0a1a547d1b7c6c1990 472 PANTHER PTHR11699:SF108 9 468 2.4E-172 T 13-09-2016 PMA3_RS26370 6c7e699d8b35ff0a1a547d1b7c6c1990 472 Pfam PF00171 Aldehyde dehydrogenase family 15 466 5.7E-144 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS26370 6c7e699d8b35ff0a1a547d1b7c6c1990 472 Gene3D G3DSA:3.40.309.10 259 441 6.3E-61 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS08730 a023f6a56e502dc58ac528aa32acccff 276 PANTHER PTHR34354:SF1 1 276 2.1E-92 T 13-09-2016 PMA3_RS08730 a023f6a56e502dc58ac528aa32acccff 276 SUPERFAMILY SSF55620 180 263 5.41E-10 T 13-09-2016 PMA3_RS08730 a023f6a56e502dc58ac528aa32acccff 276 PIRSF PIRSF004750 1 276 4.1E-121 T 13-09-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS08730 a023f6a56e502dc58ac528aa32acccff 276 TIGRFAM TIGR03138 QueF: queuine synthase 5 276 1.7E-120 T 13-09-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS08730 a023f6a56e502dc58ac528aa32acccff 276 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 16 126 1.8E-44 T 13-09-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS08730 a023f6a56e502dc58ac528aa32acccff 276 Gene3D G3DSA:3.30.1130.10 141 276 6.0E-51 T 13-09-2016 PMA3_RS08730 a023f6a56e502dc58ac528aa32acccff 276 Gene3D G3DSA:3.30.1130.10 16 133 6.8E-39 T 13-09-2016 PMA3_RS08730 a023f6a56e502dc58ac528aa32acccff 276 Pfam PF14489 QueF-like protein 190 265 4.3E-24 T 13-09-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS08730 a023f6a56e502dc58ac528aa32acccff 276 PANTHER PTHR34354 1 276 2.1E-92 T 13-09-2016 PMA3_RS08730 a023f6a56e502dc58ac528aa32acccff 276 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 276 150.546 T 13-09-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PMA3_RS10685 be3d2dd101e3dbededd29a1021d160d6 311 Gene3D G3DSA:3.40.50.150 43 310 2.4E-58 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS10685 be3d2dd101e3dbededd29a1021d160d6 311 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 6.2E-142 T 13-09-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PMA3_RS10685 be3d2dd101e3dbededd29a1021d160d6 311 PANTHER PTHR11061:SF34 1 266 1.1E-99 T 13-09-2016 PMA3_RS10685 be3d2dd101e3dbededd29a1021d160d6 311 PANTHER PTHR11061 1 266 1.1E-99 T 13-09-2016 PMA3_RS10685 be3d2dd101e3dbededd29a1021d160d6 311 SUPERFAMILY SSF53335 9 288 9.53E-56 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS06825 7745ea75639988df2ed0fb241361c466 201 PIRSF PIRSF039033 3 201 5.9E-68 T 13-09-2016 IPR028347 START domain-containing protein PMA3_RS06825 7745ea75639988df2ed0fb241361c466 201 PANTHER PTHR19308 15 201 1.9E-74 T 13-09-2016 PMA3_RS06825 7745ea75639988df2ed0fb241361c466 201 PANTHER PTHR19308:SF1 15 201 1.9E-74 T 13-09-2016 PMA3_RS06825 7745ea75639988df2ed0fb241361c466 201 SUPERFAMILY SSF55961 17 201 1.87E-35 T 13-09-2016 PMA3_RS06825 7745ea75639988df2ed0fb241361c466 201 Pfam PF01852 START domain 22 198 8.9E-7 T 13-09-2016 IPR002913 START domain GO:0008289 PMA3_RS06825 7745ea75639988df2ed0fb241361c466 201 Gene3D G3DSA:3.30.530.20 18 201 6.4E-34 T 13-09-2016 IPR023393 START-like domain PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PANTHER PTHR11958 1 404 4.1E-164 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 Gene3D G3DSA:1.10.3860.10 1 406 9.1E-120 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PANTHER PTHR11958:SF26 1 404 4.1E-164 T 13-09-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 41 56 - T 13-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PRINTS PR00173 Glutamate-aspartate symporter signature 219 238 1.8E-46 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 1.8E-46 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 1.8E-46 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 1.8E-46 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PRINTS PR00173 Glutamate-aspartate symporter signature 49 69 1.8E-46 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.8E-46 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PRINTS PR00173 Glutamate-aspartate symporter signature 79 104 1.8E-46 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 1.8E-46 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 1.8E-46 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 Pfam PF00375 Sodium:dicarboxylate symporter family 6 402 2.3E-114 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS10205 fbae1d3e25bc006e5576a2c340ead0fc 419 SUPERFAMILY SSF118215 6 403 4.45E-113 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS23255 1cf21fd4d39d3799ea98ed441925e842 155 PIRSF PIRSF003230 3 143 5.1E-45 T 13-09-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PMA3_RS23255 1cf21fd4d39d3799ea98ed441925e842 155 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 10 135 7.5E-48 T 13-09-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- PMA3_RS23255 1cf21fd4d39d3799ea98ed441925e842 155 SUPERFAMILY SSF54637 9 137 1.44E-40 T 13-09-2016 IPR029069 HotDog domain PMA3_RS23255 1cf21fd4d39d3799ea98ed441925e842 155 Gene3D G3DSA:3.10.129.10 9 137 8.7E-47 T 13-09-2016 IPR029069 HotDog domain PMA3_RS23255 1cf21fd4d39d3799ea98ed441925e842 155 Pfam PF03061 Thioesterase superfamily 24 107 1.1E-16 T 13-09-2016 IPR006683 Thioesterase domain PMA3_RS23255 1cf21fd4d39d3799ea98ed441925e842 155 PANTHER PTHR31793 10 152 2.3E-47 T 13-09-2016 PMA3_RS23255 1cf21fd4d39d3799ea98ed441925e842 155 PANTHER PTHR31793:SF9 10 152 2.3E-47 T 13-09-2016 PMA3_RS23255 1cf21fd4d39d3799ea98ed441925e842 155 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 13 130 2.2E-33 T 13-09-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 Gene3D G3DSA:1.10.287.130 258 329 1.6E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 Pfam PF00512 His Kinase A (phospho-acceptor) domain 266 333 3.0E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 Gene3D G3DSA:3.30.565.10 341 486 2.8E-34 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 PANTHER PTHR24423 68 96 2.1E-60 T 13-09-2016 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 PANTHER PTHR24423 118 163 2.1E-60 T 13-09-2016 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 PANTHER PTHR24423 199 483 2.1E-60 T 13-09-2016 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 SMART SM00388 265 333 3.5E-17 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 Pfam PF00672 HAMP domain 179 253 1.1E-8 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 SUPERFAMILY SSF47384 251 333 2.35E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 484 5.3E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 SMART SM00387 379 487 5.5E-25 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 SMART SM00304 198 257 0.0071 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 6.7E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 6.7E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 484 6.7E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS24415 51edeff4a34d222bb23081df0cf86c17 506 SUPERFAMILY SSF55874 323 483 1.57E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS26035 d2cdc5cf9464c80b56bdbae2a7583bd6 301 Pfam PF07506 RepB plasmid partitioning protein 105 283 1.1E-31 T 13-09-2016 IPR011111 RepB plasmid partition PMA3_RS26035 d2cdc5cf9464c80b56bdbae2a7583bd6 301 SMART SM00470 14 107 2.8E-6 T 13-09-2016 IPR003115 ParB/Sulfiredoxin PMA3_RS26035 d2cdc5cf9464c80b56bdbae2a7583bd6 301 SUPERFAMILY SSF110849 14 106 1.57E-11 T 13-09-2016 IPR003115 ParB/Sulfiredoxin PMA3_RS26035 d2cdc5cf9464c80b56bdbae2a7583bd6 301 SUPERFAMILY SSF109709 108 196 7.72E-9 T 13-09-2016 PMA3_RS26035 d2cdc5cf9464c80b56bdbae2a7583bd6 301 Pfam PF02195 ParB-like nuclease domain 16 96 6.8E-8 T 13-09-2016 IPR003115 ParB/Sulfiredoxin PMA3_RS26035 d2cdc5cf9464c80b56bdbae2a7583bd6 301 Gene3D G3DSA:3.90.1530.10 4 97 1.9E-11 T 13-09-2016 PMA3_RS27530 fe22398f81beb20834715646de512657 330 SUPERFAMILY SSF53474 189 323 3.51E-10 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS27530 fe22398f81beb20834715646de512657 330 SUPERFAMILY SSF53474 72 142 3.51E-10 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS27530 fe22398f81beb20834715646de512657 330 Pfam PF12048 Protein of unknown function (DUF3530) 10 323 9.4E-103 T 13-09-2016 IPR022529 Protein of unknown function DUF3530 PMA3_RS27530 fe22398f81beb20834715646de512657 330 Gene3D G3DSA:3.40.50.1820 77 134 6.5E-13 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS27530 fe22398f81beb20834715646de512657 330 Gene3D G3DSA:3.40.50.1820 189 323 6.5E-13 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS25155 6d9d5cfb67940d56216a1a4731bc2169 448 PANTHER PTHR30624:SF1 7 448 1.3E-180 T 13-09-2016 PMA3_RS25155 6d9d5cfb67940d56216a1a4731bc2169 448 SUPERFAMILY SSF111283 15 447 4.05E-127 T 13-09-2016 PMA3_RS25155 6d9d5cfb67940d56216a1a4731bc2169 448 PANTHER PTHR30624 7 448 1.3E-180 T 13-09-2016 PMA3_RS25155 6d9d5cfb67940d56216a1a4731bc2169 448 Pfam PF01523 Putative modulator of DNA gyrase 34 325 1.3E-54 T 13-09-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS27965 ad83f8f907f23331573a221cd6732033 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 13-09-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS27965 ad83f8f907f23331573a221cd6732033 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.789 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS27965 ad83f8f907f23331573a221cd6732033 417 Gene3D G3DSA:3.40.640.10 37 285 6.8E-109 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS27965 ad83f8f907f23331573a221cd6732033 417 PIRSF PIRSF000412 1 416 6.4E-170 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS27965 ad83f8f907f23331573a221cd6732033 417 PANTHER PTHR11680:SF9 1 416 0.0 T 13-09-2016 PMA3_RS27965 ad83f8f907f23331573a221cd6732033 417 Gene3D G3DSA:3.90.1150.10 286 416 5.5E-54 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS27965 ad83f8f907f23331573a221cd6732033 417 PANTHER PTHR11680 1 416 0.0 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS27965 ad83f8f907f23331573a221cd6732033 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 5.1E-181 T 13-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PMA3_RS27965 ad83f8f907f23331573a221cd6732033 417 SUPERFAMILY SSF53383 7 416 4.52E-182 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 Pfam PF00593 TonB dependent receptor 569 808 1.2E-30 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 Gene3D G3DSA:2.40.170.20 270 809 2.6E-154 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 SUPERFAMILY SSF56935 136 809 4.12E-132 T 13-09-2016 PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 PANTHER PTHR32552:SF10 61 124 8.2E-173 T 13-09-2016 PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 PANTHER PTHR32552:SF10 147 809 8.2E-173 T 13-09-2016 PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 157 808 1.1E-122 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 SMART SM00965 61 112 1.5E-8 T 13-09-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 Pfam PF07715 TonB-dependent Receptor Plug Domain 157 254 4.1E-16 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 Gene3D G3DSA:2.170.130.10 135 262 2.6E-32 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 PANTHER PTHR32552 61 124 8.2E-173 T 13-09-2016 PMA3_RS27860 a745407b34408377d42d5059084b70c4 809 PANTHER PTHR32552 147 809 8.2E-173 T 13-09-2016 PMA3_RS05175 35c839b3a9e896e87df421f9c61dfb3c 242 SUPERFAMILY SSF161098 21 231 8.72E-41 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS05175 35c839b3a9e896e87df421f9c61dfb3c 242 PANTHER PTHR30133 16 242 6.5E-120 T 13-09-2016 PMA3_RS05175 35c839b3a9e896e87df421f9c61dfb3c 242 Gene3D G3DSA:1.10.3720.10 22 233 7.2E-44 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS05175 35c839b3a9e896e87df421f9c61dfb3c 242 PANTHER PTHR30133:SF1 16 242 6.5E-120 T 13-09-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 PMA3_RS05175 35c839b3a9e896e87df421f9c61dfb3c 242 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 128 1.1E-20 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS05175 35c839b3a9e896e87df421f9c61dfb3c 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 233 6.4E-22 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 Gene3D G3DSA:3.40.50.2300 6 127 1.1E-34 T 13-09-2016 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 SUPERFAMILY SSF52172 5 186 2.56E-42 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 SMART SM00382 161 304 1.2E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 Gene3D G3DSA:1.10.10.60 398 466 8.1E-22 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 2.5E-7 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 2.5E-7 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 SMART SM00448 5 116 3.8E-32 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 Pfam PF00072 Response regulator receiver domain 7 115 5.0E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 Gene3D G3DSA:3.40.50.300 138 312 1.2E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 PANTHER PTHR32071 1 476 1.3E-248 T 13-09-2016 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 SUPERFAMILY SSF52540 140 384 1.11E-71 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 Gene3D G3DSA:1.10.8.60 314 386 4.7E-21 T 13-09-2016 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 SUPERFAMILY SSF46689 381 465 1.39E-20 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 463 1.1E-238 T 13-09-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 PANTHER PTHR32071:SF15 1 476 1.3E-248 T 13-09-2016 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 Pfam PF02954 Bacterial regulatory protein, Fis family 423 463 4.6E-13 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS01165 1322365b779a0d8a9d901b51e10cc2cf 478 Pfam PF00158 Sigma-54 interaction domain 141 308 5.9E-70 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 PANTHER PTHR19375 9 334 1.8E-183 T 13-09-2016 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 Pfam PF06723 MreB/Mbl protein 11 337 6.1E-149 T 13-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 Gene3D G3DSA:3.30.420.40 9 161 4.5E-47 T 13-09-2016 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 SUPERFAMILY SSF53067 9 150 1.87E-38 T 13-09-2016 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 Gene3D G3DSA:3.30.420.40 162 188 3.9E-34 T 13-09-2016 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 Gene3D G3DSA:3.30.420.40 265 319 3.9E-34 T 13-09-2016 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 Gene3D G3DSA:3.90.640.10 189 260 9.0E-29 T 13-09-2016 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 PANTHER PTHR19375:SF117 9 334 1.8E-183 T 13-09-2016 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 337 8.7E-162 T 13-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 SUPERFAMILY SSF53067 151 340 4.33E-48 T 13-09-2016 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 1.6E-65 T 13-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 134 153 1.6E-65 T 13-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 1.6E-65 T 13-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 1.6E-65 T 13-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PMA3_RS25205 a7041bbcfce48a6388020cfef9d48593 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 189 209 1.6E-65 T 13-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PMA3_RS21365 3eceb766227b5f01e0e3a31aefe8d1b4 426 PANTHER PTHR12227:SF0 6 423 2.2E-148 T 13-09-2016 PMA3_RS21365 3eceb766227b5f01e0e3a31aefe8d1b4 426 Gene3D G3DSA:3.40.1480.10 241 420 6.5E-66 T 13-09-2016 IPR007835 MOFRL domain PMA3_RS21365 3eceb766227b5f01e0e3a31aefe8d1b4 426 Pfam PF05161 MOFRL family 307 412 1.2E-34 T 13-09-2016 IPR007835 MOFRL domain PMA3_RS21365 3eceb766227b5f01e0e3a31aefe8d1b4 426 Gene3D G3DSA:3.40.50.10180 9 240 9.2E-100 T 13-09-2016 PMA3_RS21365 3eceb766227b5f01e0e3a31aefe8d1b4 426 PANTHER PTHR12227 6 423 2.2E-148 T 13-09-2016 PMA3_RS21365 3eceb766227b5f01e0e3a31aefe8d1b4 426 SUPERFAMILY SSF82544 4 418 3.14E-148 T 13-09-2016 PMA3_RS21365 3eceb766227b5f01e0e3a31aefe8d1b4 426 Pfam PF13660 Domain of unknown function (DUF4147) 9 229 2.7E-81 T 13-09-2016 IPR025286 MOFRL-associated domain PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 SMART SM00344 4 113 1.4E-45 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 SUPERFAMILY SSF46785 3 63 6.93E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 PANTHER PTHR30154:SF15 1 153 1.0E-58 T 13-09-2016 PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 Gene3D G3DSA:1.10.10.10 1 53 6.9E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 5.3E-18 T 13-09-2016 PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 13-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 Pfam PF01037 Lrp/AsnC ligand binding domain 70 144 1.5E-23 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.4E-15 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.4E-15 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.4E-15 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 PANTHER PTHR30154 1 153 1.0E-58 T 13-09-2016 PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 SUPERFAMILY SSF54909 64 153 8.85E-22 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS15765 e03d9eb20e5d4981c5a94683b7c38634 162 Gene3D G3DSA:3.30.70.920 57 141 3.4E-29 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS19860 d0377047eea66fbe92184d7f7f5a8fab 216 Gene3D G3DSA:3.40.630.30 21 196 5.6E-19 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19860 d0377047eea66fbe92184d7f7f5a8fab 216 PANTHER PTHR23091 126 203 7.4E-25 T 13-09-2016 PMA3_RS19860 d0377047eea66fbe92184d7f7f5a8fab 216 PANTHER PTHR23091 1 88 7.4E-25 T 13-09-2016 PMA3_RS19860 d0377047eea66fbe92184d7f7f5a8fab 216 PANTHER PTHR23091:SF240 126 203 7.4E-25 T 13-09-2016 PMA3_RS19860 d0377047eea66fbe92184d7f7f5a8fab 216 PANTHER PTHR23091:SF240 1 88 7.4E-25 T 13-09-2016 PMA3_RS19860 d0377047eea66fbe92184d7f7f5a8fab 216 Pfam PF13508 Acetyltransferase (GNAT) domain 133 189 2.9E-6 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS19860 d0377047eea66fbe92184d7f7f5a8fab 216 SUPERFAMILY SSF55729 22 203 7.62E-20 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 SMART SM00267 516 689 8.1E-52 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 Pfam PF00990 Diguanylate cyclase, GGDEF domain 528 684 2.1E-40 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 PANTHER PTHR10799 561 799 9.0E-77 T 13-09-2016 PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 Gene3D G3DSA:3.20.20.450 702 952 2.3E-100 T 13-09-2016 IPR001633 EAL domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 SMART SM00091 277 344 54.0 T 13-09-2016 IPR000014 PAS domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 SMART SM00091 402 468 1.4E-5 T 13-09-2016 IPR000014 PAS domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 PANTHER PTHR10799:SF774 380 533 9.0E-77 T 13-09-2016 PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 526 686 1.6E-29 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 SUPERFAMILY SSF141868 704 951 1.09E-89 T 13-09-2016 IPR001633 EAL domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 Pfam PF00563 EAL domain 705 940 1.9E-72 T 13-09-2016 IPR001633 EAL domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 Pfam PF13426 PAS domain 413 514 5.7E-13 T 13-09-2016 IPR000014 PAS domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 Gene3D G3DSA:3.30.450.20 400 510 1.1E-22 T 13-09-2016 PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 PANTHER PTHR10799 380 533 9.0E-77 T 13-09-2016 PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 304 398 3.6E-7 T 13-09-2016 IPR000014 PAS domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 405 522 2.3E-17 T 13-09-2016 IPR000014 PAS domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 Gene3D G3DSA:3.30.70.270 529 695 1.2E-47 T 13-09-2016 PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 Gene3D G3DSA:3.30.450.20 262 399 1.6E-27 T 13-09-2016 PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 SMART SM00086 351 394 3.8E-8 T 13-09-2016 IPR001610 PAC motif PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 SMART SM00086 474 516 0.033 T 13-09-2016 IPR001610 PAC motif PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 SUPERFAMILY SSF55785 287 393 1.92E-15 T 13-09-2016 IPR000014 PAS domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 SUPERFAMILY SSF55785 407 514 2.27E-23 T 13-09-2016 IPR000014 PAS domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 SMART SM00052 699 945 4.1E-120 T 13-09-2016 IPR001633 EAL domain PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 SUPERFAMILY SSF55073 532 691 4.63E-41 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 Pfam PF08447 PAS fold 306 387 4.8E-20 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS29845 a250f8c7c3d953680b664e164b82b61a 957 PANTHER PTHR10799:SF774 561 799 9.0E-77 T 13-09-2016 PMA3_RS07795 c66ab9c98a837aa5a4e64eeec25362c1 261 SUPERFAMILY SSF111364 26 261 1.7E-69 T 13-09-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PMA3_RS07795 c66ab9c98a837aa5a4e64eeec25362c1 261 Gene3D G3DSA:2.40.230.20 18 261 1.0E-80 T 13-09-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PMA3_RS07795 c66ab9c98a837aa5a4e64eeec25362c1 261 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 40 258 1.9E-9 T 13-09-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PMA3_RS07795 c66ab9c98a837aa5a4e64eeec25362c1 261 Pfam PF16412 Domain of unknown function (DUF5020) 41 230 2.0E-9 T 13-09-2016 PMA3_RS28360 cb3e6d0f467ce6eef7b3d5a4ce806769 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 1.0E-45 T 13-09-2016 IPR009662 Malonate decarboxylase delta subunit PMA3_RS28360 cb3e6d0f467ce6eef7b3d5a4ce806769 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 54.998 T 13-09-2016 IPR009662 Malonate decarboxylase delta subunit PMA3_RS28360 cb3e6d0f467ce6eef7b3d5a4ce806769 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 7.8E-34 T 13-09-2016 IPR009662 Malonate decarboxylase delta subunit PMA3_RS28360 cb3e6d0f467ce6eef7b3d5a4ce806769 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 17 95 2.5E-24 T 13-09-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein PMA3_RS19295 8b31c48a1b02665b58c221cf1b197027 526 SUPERFAMILY SSF53720 20 516 8.51E-103 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS19295 8b31c48a1b02665b58c221cf1b197027 526 Pfam PF00171 Aldehyde dehydrogenase family 33 457 4.0E-49 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS19295 8b31c48a1b02665b58c221cf1b197027 526 PANTHER PTHR11699 1 518 7.4E-163 T 13-09-2016 PMA3_RS19295 8b31c48a1b02665b58c221cf1b197027 526 Gene3D G3DSA:3.40.309.10 266 453 1.4E-53 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS19295 8b31c48a1b02665b58c221cf1b197027 526 PANTHER PTHR11699:SF10 1 518 7.4E-163 T 13-09-2016 PMA3_RS19295 8b31c48a1b02665b58c221cf1b197027 526 Gene3D G3DSA:3.40.605.10 7 264 1.0E-47 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16840 e7b86d0c8045a9a745a322c1808603ff 402 PANTHER PTHR23537 21 400 8.4E-61 T 13-09-2016 PMA3_RS16840 e7b86d0c8045a9a745a322c1808603ff 402 Gene3D G3DSA:1.20.1250.20 21 206 9.6E-19 T 13-09-2016 PMA3_RS16840 e7b86d0c8045a9a745a322c1808603ff 402 Gene3D G3DSA:1.20.1250.20 218 391 1.1E-7 T 13-09-2016 PMA3_RS16840 e7b86d0c8045a9a745a322c1808603ff 402 PANTHER PTHR23537:SF1 21 400 8.4E-61 T 13-09-2016 PMA3_RS16840 e7b86d0c8045a9a745a322c1808603ff 402 SUPERFAMILY SSF103473 17 397 1.29E-37 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS16840 e7b86d0c8045a9a745a322c1808603ff 402 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 31 392 1.4E-81 T 13-09-2016 IPR010645 Uncharacterised MFS-type transporter YbfB PMA3_RS27835 9d60ec10c00c28360c17b01a1116e37e 148 SMART SM00448 27 140 3.0E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS27835 9d60ec10c00c28360c17b01a1116e37e 148 Gene3D G3DSA:3.40.50.2300 25 143 8.1E-32 T 13-09-2016 PMA3_RS27835 9d60ec10c00c28360c17b01a1116e37e 148 SUPERFAMILY SSF52172 25 145 1.71E-34 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS27835 9d60ec10c00c28360c17b01a1116e37e 148 PANTHER PTHR26402 27 142 4.0E-31 T 13-09-2016 PMA3_RS27835 9d60ec10c00c28360c17b01a1116e37e 148 Pfam PF00072 Response regulator receiver domain 29 140 7.0E-25 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS19930 b411cc40c7239723f7fc3732d8b01ba6 164 Pfam PF04657 Putative inner membrane exporter, YdcZ 25 160 1.5E-33 T 13-09-2016 IPR006750 Putative inner membrane exporter, YdcZ PMA3_RS19930 b411cc40c7239723f7fc3732d8b01ba6 164 PANTHER PTHR34821 16 163 1.6E-23 T 13-09-2016 PMA3_RS19930 b411cc40c7239723f7fc3732d8b01ba6 164 PANTHER PTHR34821:SF2 16 163 1.6E-23 T 13-09-2016 PMA3_RS19395 a86e8f325af89bfb563c753da03d7e8a 298 Pfam PF00892 EamA-like transporter family 159 291 1.1E-14 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS19395 a86e8f325af89bfb563c753da03d7e8a 298 Pfam PF00892 EamA-like transporter family 17 142 3.9E-13 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS19395 a86e8f325af89bfb563c753da03d7e8a 298 PANTHER PTHR12715 12 298 2.9E-127 T 13-09-2016 PMA3_RS19395 a86e8f325af89bfb563c753da03d7e8a 298 PANTHER PTHR12715:SF9 12 298 2.9E-127 T 13-09-2016 PMA3_RS19395 a86e8f325af89bfb563c753da03d7e8a 298 SUPERFAMILY SSF103481 193 295 2.75E-9 T 13-09-2016 PMA3_RS19395 a86e8f325af89bfb563c753da03d7e8a 298 SUPERFAMILY SSF103481 55 149 8.89E-8 T 13-09-2016 PMA3_RS00395 050ac8a17abc86889763f66b5b14c11f 286 SMART SM00382 49 230 6.7E-17 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS00395 050ac8a17abc86889763f66b5b14c11f 286 Gene3D G3DSA:3.40.50.300 20 238 1.4E-61 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00395 050ac8a17abc86889763f66b5b14c11f 286 PANTHER PTHR24220 22 238 1.5E-145 T 13-09-2016 PMA3_RS00395 050ac8a17abc86889763f66b5b14c11f 286 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS00395 050ac8a17abc86889763f66b5b14c11f 286 SUPERFAMILY SSF52540 21 239 2.0E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00395 050ac8a17abc86889763f66b5b14c11f 286 PANTHER PTHR24220:SF422 22 238 1.5E-145 T 13-09-2016 PMA3_RS00395 050ac8a17abc86889763f66b5b14c11f 286 Pfam PF00005 ABC transporter 41 182 4.5E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS10390 295fc6cb8ec1b2ed4555596766b036ed 220 PANTHER PTHR13887 4 217 7.4E-28 T 13-09-2016 PMA3_RS10390 295fc6cb8ec1b2ed4555596766b036ed 220 SUPERFAMILY SSF52833 5 212 2.24E-28 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS10390 295fc6cb8ec1b2ed4555596766b036ed 220 Gene3D G3DSA:3.40.30.10 4 206 2.1E-27 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS10390 295fc6cb8ec1b2ed4555596766b036ed 220 PANTHER PTHR13887:SF10 4 217 7.4E-28 T 13-09-2016 PMA3_RS10390 295fc6cb8ec1b2ed4555596766b036ed 220 Pfam PF01323 DSBA-like thioredoxin domain 6 167 3.0E-21 T 13-09-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PMA3_RS22350 7c7f0c8d9478c045bbe989599f41a2b2 149 PANTHER PTHR37421:SF1 2 147 9.3E-65 T 13-09-2016 PMA3_RS22350 7c7f0c8d9478c045bbe989599f41a2b2 149 PANTHER PTHR37421 2 147 9.3E-65 T 13-09-2016 PMA3_RS22350 7c7f0c8d9478c045bbe989599f41a2b2 149 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 4 149 41.122 T 13-09-2016 IPR008228 Uncharacterised conserved protein UCP006173 PMA3_RS22350 7c7f0c8d9478c045bbe989599f41a2b2 149 PIRSF PIRSF006173 1 149 1.3E-65 T 13-09-2016 IPR008228 Uncharacterised conserved protein UCP006173 PMA3_RS22350 7c7f0c8d9478c045bbe989599f41a2b2 149 Pfam PF03692 Putative zinc- or iron-chelating domain 26 93 6.0E-9 T 13-09-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PMA3_RS28705 e077cebb22dd693acbba443b9c82bf86 188 Gene3D G3DSA:1.10.3210.10 37 108 9.1E-7 T 13-09-2016 IPR006674 HD domain PMA3_RS28705 e077cebb22dd693acbba443b9c82bf86 188 Pfam PF01966 HD domain 42 108 4.2E-7 T 13-09-2016 IPR006674 HD domain PMA3_RS28705 e077cebb22dd693acbba443b9c82bf86 188 PANTHER PTHR40202:SF1 3 174 1.5E-46 T 13-09-2016 PMA3_RS28705 e077cebb22dd693acbba443b9c82bf86 188 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 6 181 2.1E-70 T 13-09-2016 IPR017670 Phosphonate degradation operon associated HDIG domain protein PMA3_RS28705 e077cebb22dd693acbba443b9c82bf86 188 TIGRFAM TIGR00277 HDIG: HDIG domain 37 105 3.0E-7 T 13-09-2016 IPR006675 HDIG domain PMA3_RS28705 e077cebb22dd693acbba443b9c82bf86 188 SUPERFAMILY SSF109604 34 104 2.31E-10 T 13-09-2016 PMA3_RS28705 e077cebb22dd693acbba443b9c82bf86 188 PANTHER PTHR40202 3 174 1.5E-46 T 13-09-2016 PMA3_RS10760 d2d44805454404b5f7d85c2ffd60680c 437 Gene3D G3DSA:1.20.1250.20 237 427 2.8E-24 T 13-09-2016 PMA3_RS10760 d2d44805454404b5f7d85c2ffd60680c 437 Gene3D G3DSA:1.20.1250.20 21 216 6.0E-45 T 13-09-2016 PMA3_RS10760 d2d44805454404b5f7d85c2ffd60680c 437 SUPERFAMILY SSF103473 15 435 1.01E-77 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS10760 d2d44805454404b5f7d85c2ffd60680c 437 Pfam PF07690 Major Facilitator Superfamily 32 395 1.0E-51 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS10760 d2d44805454404b5f7d85c2ffd60680c 437 PANTHER PTHR11662 19 429 9.6E-112 T 13-09-2016 PMA3_RS10760 d2d44805454404b5f7d85c2ffd60680c 437 PANTHER PTHR11662:SF257 19 429 9.6E-112 T 13-09-2016 PMA3_RS18820 f03742519fc253772defd639d52b3635 547 SUPERFAMILY SSF53649 232 523 6.71E-27 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS18820 f03742519fc253772defd639d52b3635 547 PANTHER PTHR30443 1 544 4.0E-251 T 13-09-2016 PMA3_RS18820 f03742519fc253772defd639d52b3635 547 PANTHER PTHR30443:SF0 1 544 4.0E-251 T 13-09-2016 PMA3_RS18820 f03742519fc253772defd639d52b3635 547 Pfam PF00884 Sulfatase 231 519 9.7E-53 T 13-09-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PMA3_RS18820 f03742519fc253772defd639d52b3635 547 Pfam PF08019 Domain of unknown function (DUF1705) 52 201 1.1E-46 T 13-09-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 PMA3_RS18820 f03742519fc253772defd639d52b3635 547 Gene3D G3DSA:3.40.720.10 232 522 6.1E-17 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 Pfam PF03466 LysR substrate binding domain 92 290 4.9E-40 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 Gene3D G3DSA:3.40.190.10 93 182 5.6E-24 T 13-09-2016 PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 Gene3D G3DSA:3.40.190.10 183 263 8.9E-9 T 13-09-2016 PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 Gene3D G3DSA:1.10.10.10 5 85 9.0E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 9.6E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.0E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.0E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.0E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 PANTHER PTHR30419:SF3 1 286 2.4E-57 T 13-09-2016 PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 SUPERFAMILY SSF46785 5 114 1.02E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 PANTHER PTHR30419 1 286 2.4E-57 T 13-09-2016 PMA3_RS16985 d40a406909deb7aaccf135edf496a021 297 SUPERFAMILY SSF53850 94 291 9.88E-40 T 13-09-2016 PMA3_RS18365 2dae937f4952768d742e1ee6490f4868 178 PANTHER PTHR37816:SF1 2 178 1.8E-35 T 13-09-2016 PMA3_RS18365 2dae937f4952768d742e1ee6490f4868 178 Pfam PF13238 AAA domain 4 50 6.7E-7 T 13-09-2016 PMA3_RS18365 2dae937f4952768d742e1ee6490f4868 178 Gene3D G3DSA:3.40.50.300 2 103 1.5E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18365 2dae937f4952768d742e1ee6490f4868 178 PANTHER PTHR37816 2 178 1.8E-35 T 13-09-2016 PMA3_RS18365 2dae937f4952768d742e1ee6490f4868 178 SUPERFAMILY SSF52540 2 112 5.24E-19 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30035 7030f166a2e9995ebb3c6d8f4da9b978 289 PANTHER PTHR11410 27 125 1.8E-91 T 13-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PMA3_RS30035 7030f166a2e9995ebb3c6d8f4da9b978 289 PANTHER PTHR11410 143 289 1.8E-91 T 13-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PMA3_RS30035 7030f166a2e9995ebb3c6d8f4da9b978 289 Hamap MF_01393 ATP synthase subunit a [atpB]. 10 288 15.45 T 13-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PMA3_RS30035 7030f166a2e9995ebb3c6d8f4da9b978 289 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 42 283 7.5E-42 T 13-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PMA3_RS30035 7030f166a2e9995ebb3c6d8f4da9b978 289 ProSitePatterns PS00449 ATP synthase a subunit signature. 217 226 - T 13-09-2016 IPR023011 ATPase, F0 complex, subunit A, active site PMA3_RS30035 7030f166a2e9995ebb3c6d8f4da9b978 289 SUPERFAMILY SSF81336 100 282 2.75E-39 T 13-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PMA3_RS30035 7030f166a2e9995ebb3c6d8f4da9b978 289 Gene3D G3DSA:1.20.120.220 102 287 2.6E-50 T 13-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PMA3_RS30035 7030f166a2e9995ebb3c6d8f4da9b978 289 PANTHER PTHR11410:SF7 27 125 1.8E-91 T 13-09-2016 PMA3_RS30035 7030f166a2e9995ebb3c6d8f4da9b978 289 PANTHER PTHR11410:SF7 143 289 1.8E-91 T 13-09-2016 PMA3_RS30035 7030f166a2e9995ebb3c6d8f4da9b978 289 Pfam PF00119 ATP synthase A chain 51 282 2.8E-55 T 13-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PMA3_RS04950 f8af3bec97dc87d155c4b10afa3399de 281 SUPERFAMILY SSF53474 3 279 1.05E-97 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS04950 f8af3bec97dc87d155c4b10afa3399de 281 Gene3D G3DSA:3.40.50.1820 3 279 3.9E-81 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS04950 f8af3bec97dc87d155c4b10afa3399de 281 PANTHER PTHR10061 2 281 6.6E-183 T 13-09-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 PMA3_RS04950 f8af3bec97dc87d155c4b10afa3399de 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 279 1.8E-127 T 13-09-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 PMA3_RS04950 f8af3bec97dc87d155c4b10afa3399de 281 Pfam PF00756 Putative esterase 23 272 6.0E-64 T 13-09-2016 IPR000801 Putative esterase PMA3_RS29680 ef65f43c5184d0e7c7ca274c5e461397 298 PANTHER PTHR21666 48 292 6.7E-51 T 13-09-2016 PMA3_RS29680 ef65f43c5184d0e7c7ca274c5e461397 298 Pfam PF13511 Domain of unknown function (DUF4124) 11 44 3.2E-9 T 13-09-2016 IPR025392 Domain of unknown function DUF4124 PMA3_RS29680 ef65f43c5184d0e7c7ca274c5e461397 298 Gene3D G3DSA:2.70.70.10 143 271 5.8E-29 T 13-09-2016 PMA3_RS29680 ef65f43c5184d0e7c7ca274c5e461397 298 Pfam PF01551 Peptidase family M23 176 271 4.3E-22 T 13-09-2016 IPR016047 Peptidase M23 PMA3_RS29680 ef65f43c5184d0e7c7ca274c5e461397 298 PANTHER PTHR21666:SF204 48 292 6.7E-51 T 13-09-2016 PMA3_RS29680 ef65f43c5184d0e7c7ca274c5e461397 298 SUPERFAMILY SSF51261 168 272 3.5E-27 T 13-09-2016 IPR011055 Duplicated hybrid motif PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 13-09-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 Gene3D G3DSA:2.40.180.10 3 358 2.8E-184 T 13-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 SMART SM01060 8 392 1.1E-292 T 13-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 13-09-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 Pfam PF00199 Catalase 8 388 3.5E-195 T 13-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 Pfam PF06628 Catalase-related immune-responsive 417 477 1.5E-19 T 13-09-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 PRINTS PR00067 Catalase signature 21 44 1.8E-76 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 PRINTS PR00067 Catalase signature 321 347 1.8E-76 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 PRINTS PR00067 Catalase signature 84 102 1.8E-76 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 PRINTS PR00067 Catalase signature 105 122 1.8E-76 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 PRINTS PR00067 Catalase signature 124 142 1.8E-76 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 PRINTS PR00067 Catalase signature 289 316 1.8E-76 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 PIRSF PIRSF038928 1 483 2.9E-226 T 13-09-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 PANTHER PTHR11465 3 479 2.2E-303 T 13-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS27135 3b7567df87c2b91caf7045e0ddfc4a82 484 SUPERFAMILY SSF56634 3 483 3.79E-215 T 13-09-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PMA3_RS07315 a044ac8a429ecaefd34b3d481d517fab 75 PANTHER PTHR38444 1 73 3.9E-39 T 13-09-2016 PMA3_RS07315 a044ac8a429ecaefd34b3d481d517fab 75 Gene3D G3DSA:3.90.820.10 12 70 3.3E-32 T 13-09-2016 PMA3_RS07315 a044ac8a429ecaefd34b3d481d517fab 75 SUPERFAMILY SSF160582 1 70 6.8E-30 T 13-09-2016 PMA3_RS07315 a044ac8a429ecaefd34b3d481d517fab 75 PANTHER PTHR38444:SF1 1 73 3.9E-39 T 13-09-2016 PMA3_RS07315 a044ac8a429ecaefd34b3d481d517fab 75 SMART SM00923 3 53 2.2E-26 T 13-09-2016 IPR005153 MbtH-like protein PMA3_RS07315 a044ac8a429ecaefd34b3d481d517fab 75 Pfam PF03621 MbtH-like protein 1 53 1.8E-24 T 13-09-2016 IPR005153 MbtH-like protein PMA3_RS18295 1fc6a02099ca2b13c53dd99639fd3755 422 SUPERFAMILY SSF56935 25 422 3.85E-75 T 13-09-2016 PMA3_RS18295 1fc6a02099ca2b13c53dd99639fd3755 422 PANTHER PTHR35093:SF2 1 422 2.4E-80 T 13-09-2016 PMA3_RS18295 1fc6a02099ca2b13c53dd99639fd3755 422 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 418 8.7E-78 T 13-09-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PMA3_RS18295 1fc6a02099ca2b13c53dd99639fd3755 422 PANTHER PTHR35093 1 422 2.4E-80 T 13-09-2016 PMA3_RS18295 1fc6a02099ca2b13c53dd99639fd3755 422 Gene3D G3DSA:2.40.160.60 25 422 3.9E-96 T 13-09-2016 PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 SUPERFAMILY SSF53850 87 285 7.0E-33 T 13-09-2016 PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 PANTHER PTHR30126:SF20 1 285 1.5E-96 T 13-09-2016 PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 SUPERFAMILY SSF46785 1 110 1.44E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 PANTHER PTHR30126 1 285 1.5E-96 T 13-09-2016 PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 Gene3D G3DSA:3.40.190.10 194 256 1.9E-11 T 13-09-2016 PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 Gene3D G3DSA:3.40.190.10 83 193 5.4E-20 T 13-09-2016 PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 Gene3D G3DSA:1.10.10.10 1 82 1.5E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.5E-21 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 Pfam PF03466 LysR substrate binding domain 86 285 2.2E-37 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.1E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.1E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS16835 7d9ec1c6e4a3d1fb928ac7708daf8544 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.1E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29120 21622b489b46d681270e1efbb046cde9 261 Gene3D G3DSA:3.40.190.10 141 209 3.6E-12 T 13-09-2016 PMA3_RS29120 21622b489b46d681270e1efbb046cde9 261 PANTHER PTHR18966:SF191 17 256 3.2E-39 T 13-09-2016 PMA3_RS29120 21622b489b46d681270e1efbb046cde9 261 Gene3D G3DSA:3.40.190.10 17 140 2.1E-36 T 13-09-2016 PMA3_RS29120 21622b489b46d681270e1efbb046cde9 261 SMART SM00062 36 256 3.4E-40 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS29120 21622b489b46d681270e1efbb046cde9 261 PANTHER PTHR18966 17 256 3.2E-39 T 13-09-2016 PMA3_RS29120 21622b489b46d681270e1efbb046cde9 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 2.8E-47 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS29120 21622b489b46d681270e1efbb046cde9 261 SUPERFAMILY SSF53850 28 258 2.53E-53 T 13-09-2016 PMA3_RS26550 adf8f09ae9c770e86d8c60c1f758af16 316 PIRSF PIRSF028757 14 314 2.9E-81 T 13-09-2016 IPR003507 Peptidase family S66 PMA3_RS26550 adf8f09ae9c770e86d8c60c1f758af16 316 Gene3D G3DSA:3.50.30.60 179 306 2.2E-40 T 13-09-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain PMA3_RS26550 adf8f09ae9c770e86d8c60c1f758af16 316 PANTHER PTHR30237 24 315 6.8E-91 T 13-09-2016 PMA3_RS26550 adf8f09ae9c770e86d8c60c1f758af16 316 SUPERFAMILY SSF52317 15 167 1.74E-44 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS26550 adf8f09ae9c770e86d8c60c1f758af16 316 PANTHER PTHR30237:SF2 24 315 6.8E-91 T 13-09-2016 PMA3_RS26550 adf8f09ae9c770e86d8c60c1f758af16 316 Pfam PF02016 LD-carboxypeptidase 24 299 3.6E-80 T 13-09-2016 IPR003507 Peptidase family S66 PMA3_RS26550 adf8f09ae9c770e86d8c60c1f758af16 316 Gene3D G3DSA:3.40.50.10740 16 166 2.1E-50 T 13-09-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain PMA3_RS26550 adf8f09ae9c770e86d8c60c1f758af16 316 SUPERFAMILY SSF141986 156 304 2.75E-40 T 13-09-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain PMA3_RS18095 ba0d171bfc449f057161f01f9148bc28 353 SUPERFAMILY SSF110296 54 321 2.09E-37 T 13-09-2016 PMA3_RS18095 ba0d171bfc449f057161f01f9148bc28 353 Pfam PF14870 Photosynthesis system II assembly factor YCF48 78 124 5.4E-7 T 13-09-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain PMA3_RS18095 ba0d171bfc449f057161f01f9148bc28 353 Gene3D G3DSA:2.130.10.10 54 317 2.0E-25 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS08450 370591a23a203849b34f939171997e9a 219 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 17 205 2.0E-42 T 13-09-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB PMA3_RS08450 370591a23a203849b34f939171997e9a 219 Gene3D G3DSA:2.40.360.10 19 214 1.7E-43 T 13-09-2016 IPR023373 YmcC-like domain PMA3_RS08450 370591a23a203849b34f939171997e9a 219 SUPERFAMILY SSF159270 25 213 1.31E-44 T 13-09-2016 IPR023373 YmcC-like domain PMA3_RS16295 b7fac187887fab6d489381e554ac9abc 146 SUPERFAMILY SSF46626 40 143 4.86E-20 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16295 b7fac187887fab6d489381e554ac9abc 146 Gene3D G3DSA:1.10.760.10 19 133 8.4E-16 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16295 b7fac187887fab6d489381e554ac9abc 146 Pfam PF00034 Cytochrome c 49 131 6.2E-11 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS08695 397fe578316d784af50f036fcef20a5a 193 Gene3D G3DSA:2.40.10.220 105 188 4.8E-4 T 13-09-2016 PMA3_RS08695 397fe578316d784af50f036fcef20a5a 193 Pfam PF07238 PilZ domain 77 176 5.5E-12 T 13-09-2016 IPR009875 PilZ domain GO:0035438 PMA3_RS23755 da5eb19d8c5a9f38d83e4c6a904b1f06 302 Pfam PF00691 OmpA family 178 273 4.1E-16 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS23755 da5eb19d8c5a9f38d83e4c6a904b1f06 302 PANTHER PTHR30128 182 283 3.7E-30 T 13-09-2016 PMA3_RS23755 da5eb19d8c5a9f38d83e4c6a904b1f06 302 Gene3D G3DSA:3.30.1330.60 166 279 2.5E-28 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS23755 da5eb19d8c5a9f38d83e4c6a904b1f06 302 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 224 241 1.3E-13 T 13-09-2016 PMA3_RS23755 da5eb19d8c5a9f38d83e4c6a904b1f06 302 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 262 282 1.3E-13 T 13-09-2016 PMA3_RS23755 da5eb19d8c5a9f38d83e4c6a904b1f06 302 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 39 57 1.3E-13 T 13-09-2016 PMA3_RS23755 da5eb19d8c5a9f38d83e4c6a904b1f06 302 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 242 261 1.3E-13 T 13-09-2016 PMA3_RS23755 da5eb19d8c5a9f38d83e4c6a904b1f06 302 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 77 95 1.3E-13 T 13-09-2016 PMA3_RS23755 da5eb19d8c5a9f38d83e4c6a904b1f06 302 SUPERFAMILY SSF103088 151 278 2.88E-29 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS22980 3a1c2fd10614770cff874739210c9504 316 PANTHER PTHR30213:SF1 10 280 4.7E-69 T 13-09-2016 PMA3_RS22980 3a1c2fd10614770cff874739210c9504 316 Pfam PF03631 Virulence factor BrkB 24 277 3.3E-70 T 13-09-2016 IPR017039 Virulence factor BrkB PMA3_RS22980 3a1c2fd10614770cff874739210c9504 316 PIRSF PIRSF035875 1 298 7.4E-90 T 13-09-2016 IPR017039 Virulence factor BrkB PMA3_RS22980 3a1c2fd10614770cff874739210c9504 316 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 275 5.2E-42 T 13-09-2016 IPR017039 Virulence factor BrkB PMA3_RS22980 3a1c2fd10614770cff874739210c9504 316 PANTHER PTHR30213 10 280 4.7E-69 T 13-09-2016 PMA3_RS21390 0b371dfd7424da1c3f59695483457108 401 Pfam PF07690 Major Facilitator Superfamily 21 233 4.4E-25 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS21390 0b371dfd7424da1c3f59695483457108 401 SUPERFAMILY SSF103473 16 392 4.84E-53 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS21390 0b371dfd7424da1c3f59695483457108 401 PANTHER PTHR23501:SF56 14 390 5.9E-122 T 13-09-2016 PMA3_RS21390 0b371dfd7424da1c3f59695483457108 401 Gene3D G3DSA:1.20.1250.20 224 391 1.4E-13 T 13-09-2016 PMA3_RS21390 0b371dfd7424da1c3f59695483457108 401 Gene3D G3DSA:1.20.1250.20 19 197 1.1E-24 T 13-09-2016 PMA3_RS21390 0b371dfd7424da1c3f59695483457108 401 PANTHER PTHR23501 14 390 5.9E-122 T 13-09-2016 PMA3_RS05845 442ef253dddbfd439064b799100d1554 225 PANTHER PTHR26402:SF600 1 223 1.5E-106 T 13-09-2016 PMA3_RS05845 442ef253dddbfd439064b799100d1554 225 SMART SM00448 1 112 5.7E-40 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05845 442ef253dddbfd439064b799100d1554 225 PANTHER PTHR26402 1 223 1.5E-106 T 13-09-2016 PMA3_RS05845 442ef253dddbfd439064b799100d1554 225 SMART SM00862 145 220 5.3E-22 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS05845 442ef253dddbfd439064b799100d1554 225 Gene3D G3DSA:1.10.10.10 125 222 1.6E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05845 442ef253dddbfd439064b799100d1554 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.4E-21 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS05845 442ef253dddbfd439064b799100d1554 225 Gene3D G3DSA:3.40.50.2300 1 124 1.4E-36 T 13-09-2016 PMA3_RS05845 442ef253dddbfd439064b799100d1554 225 SUPERFAMILY SSF52172 1 176 5.57E-40 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS05845 442ef253dddbfd439064b799100d1554 225 Pfam PF00072 Response regulator receiver domain 4 112 2.1E-27 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS22120 0caa73f3f6e191c105f6ed3a9d7da7fa 482 Gene3D G3DSA:3.50.50.60 6 157 1.3E-8 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22120 0caa73f3f6e191c105f6ed3a9d7da7fa 482 Pfam PF13454 FAD-NAD(P)-binding 6 161 1.6E-25 T 13-09-2016 PMA3_RS22120 0caa73f3f6e191c105f6ed3a9d7da7fa 482 PANTHER PTHR40254:SF1 1 482 5.7E-37 T 13-09-2016 PMA3_RS22120 0caa73f3f6e191c105f6ed3a9d7da7fa 482 PANTHER PTHR40254 1 482 5.7E-37 T 13-09-2016 PMA3_RS22120 0caa73f3f6e191c105f6ed3a9d7da7fa 482 SUPERFAMILY SSF51905 4 221 1.02E-12 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22120 0caa73f3f6e191c105f6ed3a9d7da7fa 482 Gene3D G3DSA:3.50.50.60 158 247 5.4E-5 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22120 0caa73f3f6e191c105f6ed3a9d7da7fa 482 Gene3D G3DSA:3.50.50.60 357 474 5.4E-5 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS23185 883ff23e684aba0a7691080d9d8f57b2 458 Pfam PF03313 Serine dehydratase alpha chain 187 452 7.5E-106 T 13-09-2016 IPR005130 Serine dehydratase-like, alpha subunit PMA3_RS23185 883ff23e684aba0a7691080d9d8f57b2 458 Pfam PF03315 Serine dehydratase beta chain 4 156 5.9E-59 T 13-09-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PMA3_RS23185 883ff23e684aba0a7691080d9d8f57b2 458 Gene3D G3DSA:3.30.1330.90 11 157 1.8E-54 T 13-09-2016 IPR029009 Allosteric substrate binding domain PMA3_RS23185 883ff23e684aba0a7691080d9d8f57b2 458 PANTHER PTHR30182:SF1 1 455 5.3E-246 T 13-09-2016 PMA3_RS23185 883ff23e684aba0a7691080d9d8f57b2 458 SUPERFAMILY SSF143548 17 157 6.8E-46 T 13-09-2016 IPR029009 Allosteric substrate binding domain PMA3_RS23185 883ff23e684aba0a7691080d9d8f57b2 458 PANTHER PTHR30182 1 455 5.3E-246 T 13-09-2016 PMA3_RS23185 883ff23e684aba0a7691080d9d8f57b2 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 4 455 6.1E-220 T 13-09-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PMA3_RS04555 b20753d75b95f9f4b8714bddd0ef4ecc 315 PANTHER PTHR30193 4 309 2.8E-96 T 13-09-2016 PMA3_RS04555 b20753d75b95f9f4b8714bddd0ef4ecc 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 309 1.1E-13 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04555 b20753d75b95f9f4b8714bddd0ef4ecc 315 SUPERFAMILY SSF161098 32 309 2.9E-43 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04555 b20753d75b95f9f4b8714bddd0ef4ecc 315 PANTHER PTHR30193:SF5 4 309 2.8E-96 T 13-09-2016 PMA3_RS04555 b20753d75b95f9f4b8714bddd0ef4ecc 315 Gene3D G3DSA:1.10.3720.10 26 303 2.0E-41 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS01635 3d50dee309b2fff3ba0c396b338e6401 141 Gene3D G3DSA:3.10.129.10 10 136 7.3E-31 T 13-09-2016 IPR029069 HotDog domain PMA3_RS01635 3d50dee309b2fff3ba0c396b338e6401 141 PANTHER PTHR31793 11 138 3.1E-30 T 13-09-2016 PMA3_RS01635 3d50dee309b2fff3ba0c396b338e6401 141 Pfam PF03061 Thioesterase superfamily 23 87 1.5E-7 T 13-09-2016 IPR006683 Thioesterase domain PMA3_RS01635 3d50dee309b2fff3ba0c396b338e6401 141 PANTHER PTHR31793:SF9 11 138 3.1E-30 T 13-09-2016 PMA3_RS01635 3d50dee309b2fff3ba0c396b338e6401 141 SUPERFAMILY SSF54637 11 138 3.42E-30 T 13-09-2016 IPR029069 HotDog domain PMA3_RS00280 4f1cd49931e3449179da3239eac0656f 406 Gene3D G3DSA:3.30.1540.10 232 314 1.7E-36 T 13-09-2016 PMA3_RS00280 4f1cd49931e3449179da3239eac0656f 406 Pfam PF02515 CoA-transferase family III 4 382 2.0E-134 T 13-09-2016 IPR003673 CoA-transferase family III GO:0003824 PMA3_RS00280 4f1cd49931e3449179da3239eac0656f 406 Gene3D G3DSA:3.40.50.10540 315 406 1.3E-122 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS00280 4f1cd49931e3449179da3239eac0656f 406 Gene3D G3DSA:3.40.50.10540 2 226 1.3E-122 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS00280 4f1cd49931e3449179da3239eac0656f 406 SUPERFAMILY SSF89796 1 406 1.16E-145 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS00280 4f1cd49931e3449179da3239eac0656f 406 PANTHER PTHR24023:SF593 54 393 1.6E-32 T 13-09-2016 PMA3_RS00280 4f1cd49931e3449179da3239eac0656f 406 PANTHER PTHR24023 54 393 1.6E-32 T 13-09-2016 PMA3_RS01245 f9b8378580fc65134ad1800a31102e15 189 SUPERFAMILY SSF50814 12 179 2.53E-41 T 13-09-2016 IPR011038 Calycin-like PMA3_RS01245 f9b8378580fc65134ad1800a31102e15 189 PANTHER PTHR10612 4 177 1.9E-35 T 13-09-2016 PMA3_RS01245 f9b8378580fc65134ad1800a31102e15 189 PIRSF PIRSF036893 1 189 1.7E-53 T 13-09-2016 IPR022271 Lipocalin, ApoD type PMA3_RS01245 f9b8378580fc65134ad1800a31102e15 189 Gene3D G3DSA:2.40.128.20 3 177 1.2E-49 T 13-09-2016 IPR012674 Calycin PMA3_RS01245 f9b8378580fc65134ad1800a31102e15 189 Pfam PF08212 Lipocalin-like domain 33 179 3.0E-55 T 13-09-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain PMA3_RS01245 f9b8378580fc65134ad1800a31102e15 189 PRINTS PR01171 Bacterial lipocalin signature 142 153 3.8E-12 T 13-09-2016 IPR002446 Lipocalin, bacterial GO:0005215 PMA3_RS01245 f9b8378580fc65134ad1800a31102e15 189 PRINTS PR01171 Bacterial lipocalin signature 169 179 3.8E-12 T 13-09-2016 IPR002446 Lipocalin, bacterial GO:0005215 PMA3_RS01245 f9b8378580fc65134ad1800a31102e15 189 PRINTS PR01171 Bacterial lipocalin signature 50 66 3.8E-12 T 13-09-2016 IPR002446 Lipocalin, bacterial GO:0005215 PMA3_RS01245 f9b8378580fc65134ad1800a31102e15 189 PRINTS PR01171 Bacterial lipocalin signature 33 47 3.8E-12 T 13-09-2016 IPR002446 Lipocalin, bacterial GO:0005215 PMA3_RS01245 f9b8378580fc65134ad1800a31102e15 189 ProSitePatterns PS00213 Lipocalin signature. 34 45 - T 13-09-2016 IPR022272 Lipocalin family conserved site PMA3_RS21480 603c03a8e1c25bf849f71932d77c0b69 400 SUPERFAMILY SSF48452 142 254 8.71E-14 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS21480 603c03a8e1c25bf849f71932d77c0b69 400 Gene3D G3DSA:1.25.40.10 188 271 4.2E-32 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS21480 603c03a8e1c25bf849f71932d77c0b69 400 Pfam PF13432 Tetratricopeptide repeat 191 255 2.8E-5 T 13-09-2016 PMA3_RS21480 603c03a8e1c25bf849f71932d77c0b69 400 Pfam PF13432 Tetratricopeptide repeat 137 177 2.7E-5 T 13-09-2016 PMA3_RS21480 603c03a8e1c25bf849f71932d77c0b69 400 PANTHER PTHR12558 141 270 6.4E-32 T 13-09-2016 PMA3_RS21480 603c03a8e1c25bf849f71932d77c0b69 400 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 116 9.7E-30 T 13-09-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI PMA3_RS21480 603c03a8e1c25bf849f71932d77c0b69 400 Gene3D G3DSA:1.25.40.10 137 187 7.3E-7 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS21480 603c03a8e1c25bf849f71932d77c0b69 400 SMART SM00028 221 254 1.7 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS21480 603c03a8e1c25bf849f71932d77c0b69 400 SMART SM00028 150 183 0.5 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS21480 603c03a8e1c25bf849f71932d77c0b69 400 PANTHER PTHR12558:SF12 141 270 6.4E-32 T 13-09-2016 PMA3_RS16345 b77e1b9248c9c2360c72d893c86dc47d 147 PANTHER PTHR30154:SF21 1 147 6.2E-50 T 13-09-2016 PMA3_RS16345 b77e1b9248c9c2360c72d893c86dc47d 147 Pfam PF13404 AsnC-type helix-turn-helix domain 1 44 2.2E-6 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS16345 b77e1b9248c9c2360c72d893c86dc47d 147 PANTHER PTHR30154 1 147 6.2E-50 T 13-09-2016 PMA3_RS16345 b77e1b9248c9c2360c72d893c86dc47d 147 Gene3D G3DSA:1.10.10.10 1 53 7.2E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06310 3c83712556e4071de7d3b4355feb65c0 61 Gene3D G3DSA:3.40.1620.10 4 50 4.0E-4 T 13-09-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PMA3_RS06310 3c83712556e4071de7d3b4355feb65c0 61 SUPERFAMILY SSF143120 6 53 1.24E-7 T 13-09-2016 PMA3_RS24565 3518bab0d311130b98c9060b07e5dfdb 169 Pfam PF02600 Disulfide bond formation protein DsbB 12 157 4.2E-36 T 13-09-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PMA3_RS24565 3518bab0d311130b98c9060b07e5dfdb 169 PANTHER PTHR36570 6 156 7.2E-18 T 13-09-2016 PMA3_RS24565 3518bab0d311130b98c9060b07e5dfdb 169 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 18.971 T 13-09-2016 IPR022920 Disulphide bond formation protein DsbB PMA3_RS24565 3518bab0d311130b98c9060b07e5dfdb 169 Gene3D G3DSA:1.20.1550.10 2 167 6.4E-50 T 13-09-2016 IPR023380 Disulphide bond formation protein DsbB-like domain PMA3_RS24565 3518bab0d311130b98c9060b07e5dfdb 169 SUPERFAMILY SSF158442 15 158 1.44E-36 T 13-09-2016 PMA3_RS02540 ac8bb0c15b84e5676d5986309816e4ae 106 SUPERFAMILY SSF46689 27 105 3.94E-21 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02540 ac8bb0c15b84e5676d5986309816e4ae 106 Pfam PF02954 Bacterial regulatory protein, Fis family 63 103 4.8E-13 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS02540 ac8bb0c15b84e5676d5986309816e4ae 106 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 86 106 2.7E-9 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS02540 ac8bb0c15b84e5676d5986309816e4ae 106 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 69 86 2.7E-9 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS02540 ac8bb0c15b84e5676d5986309816e4ae 106 PIRSF PIRSF002097 8 106 5.1E-40 T 13-09-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PMA3_RS02540 ac8bb0c15b84e5676d5986309816e4ae 106 PANTHER PTHR32071 28 105 7.3E-19 T 13-09-2016 PMA3_RS02540 ac8bb0c15b84e5676d5986309816e4ae 106 Gene3D G3DSA:1.10.10.60 35 105 1.6E-23 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02540 ac8bb0c15b84e5676d5986309816e4ae 106 PRINTS PR01591 DNA-binding protein FIS signature 65 77 5.5E-11 T 13-09-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PMA3_RS02540 ac8bb0c15b84e5676d5986309816e4ae 106 PRINTS PR01591 DNA-binding protein FIS signature 50 65 5.5E-11 T 13-09-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PMA3_RS02540 ac8bb0c15b84e5676d5986309816e4ae 106 PRINTS PR01591 DNA-binding protein FIS signature 34 50 5.5E-11 T 13-09-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PMA3_RS15380 79674eaa00517fdd3b9ebc0a4149d37d 151 Gene3D G3DSA:3.30.420.10 4 145 2.7E-59 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS15380 79674eaa00517fdd3b9ebc0a4149d37d 151 PANTHER PTHR10642 1 146 3.0E-55 T 13-09-2016 PMA3_RS15380 79674eaa00517fdd3b9ebc0a4149d37d 151 Hamap MF_00042 Ribonuclease H [rnhA]. 3 151 33.417 T 13-09-2016 IPR022892 Ribonuclease H GO:0004523 PMA3_RS15380 79674eaa00517fdd3b9ebc0a4149d37d 151 SUPERFAMILY SSF53098 4 143 3.79E-57 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS15380 79674eaa00517fdd3b9ebc0a4149d37d 151 Pfam PF00075 RNase H 5 142 3.5E-47 T 13-09-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.5E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.5E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.5E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 PANTHER PTHR30537:SF26 1 292 1.5E-81 T 13-09-2016 PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 PANTHER PTHR30537 1 292 1.5E-81 T 13-09-2016 PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 Gene3D G3DSA:1.10.10.10 7 89 8.0E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 Gene3D G3DSA:3.40.190.10 175 259 1.2E-21 T 13-09-2016 PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 SUPERFAMILY SSF53850 98 291 1.57E-31 T 13-09-2016 PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 SUPERFAMILY SSF46785 3 86 1.15E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 Pfam PF03466 LysR substrate binding domain 88 290 1.6E-31 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 3.2E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23540 162925bc96383812a700d786596eb7f3 293 Gene3D G3DSA:3.40.190.10 90 174 3.1E-5 T 13-09-2016 PMA3_RS14730 911cc8eb9dc49c4879dc83b83b3e86f2 198 PANTHER PTHR30462 6 198 4.7E-18 T 13-09-2016 PMA3_RS14730 911cc8eb9dc49c4879dc83b83b3e86f2 198 Pfam PF04403 Paraquat-inducible protein A 47 196 4.0E-38 T 13-09-2016 IPR007498 Paraquat-inducible protein A PMA3_RS00990 ed8bc1864903faa7dd2c00a364c62bff 409 PANTHER PTHR13369:SF1 108 261 1.2E-81 T 13-09-2016 PMA3_RS00990 ed8bc1864903faa7dd2c00a364c62bff 409 Pfam PF13679 Methyltransferase domain 117 240 5.3E-14 T 13-09-2016 IPR025714 Methyltransferase domain PMA3_RS00990 ed8bc1864903faa7dd2c00a364c62bff 409 PANTHER PTHR13369 108 261 1.2E-81 T 13-09-2016 PMA3_RS00990 ed8bc1864903faa7dd2c00a364c62bff 409 SUPERFAMILY SSF53335 117 191 5.63E-8 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS00990 ed8bc1864903faa7dd2c00a364c62bff 409 PANTHER PTHR13369 341 408 1.2E-81 T 13-09-2016 PMA3_RS00990 ed8bc1864903faa7dd2c00a364c62bff 409 PANTHER PTHR13369:SF1 341 408 1.2E-81 T 13-09-2016 PMA3_RS29035 3208add10be854e7ccec9f41e1cc1a9a 444 Gene3D G3DSA:3.40.350.10 4 180 1.9E-53 T 13-09-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PMA3_RS29035 3208add10be854e7ccec9f41e1cc1a9a 444 SUPERFAMILY SSF53092 4 176 1.1E-53 T 13-09-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PMA3_RS29035 3208add10be854e7ccec9f41e1cc1a9a 444 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 128 6.5E-36 T 13-09-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 PMA3_RS29035 3208add10be854e7ccec9f41e1cc1a9a 444 Gene3D G3DSA:3.90.230.10 181 437 2.4E-86 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS29035 3208add10be854e7ccec9f41e1cc1a9a 444 PANTHER PTHR10804 4 437 2.4E-165 T 13-09-2016 PMA3_RS29035 3208add10be854e7ccec9f41e1cc1a9a 444 Pfam PF00557 Metallopeptidase family M24 184 415 5.1E-65 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS29035 3208add10be854e7ccec9f41e1cc1a9a 444 PANTHER PTHR10804:SF17 4 437 2.4E-165 T 13-09-2016 PMA3_RS29035 3208add10be854e7ccec9f41e1cc1a9a 444 SUPERFAMILY SSF55920 177 437 1.7E-85 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS29035 3208add10be854e7ccec9f41e1cc1a9a 444 SMART SM01011 4 138 1.3E-64 T 13-09-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 PMA3_RS05060 7eccdd15d9b0810412f7e1c4fee76ec6 236 PANTHER PTHR21600:SF21 1 234 5.1E-95 T 13-09-2016 PMA3_RS05060 7eccdd15d9b0810412f7e1c4fee76ec6 236 Pfam PF01479 S4 domain 15 47 1.2E-6 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS05060 7eccdd15d9b0810412f7e1c4fee76ec6 236 PANTHER PTHR21600 1 234 5.1E-95 T 13-09-2016 PMA3_RS05060 7eccdd15d9b0810412f7e1c4fee76ec6 236 SUPERFAMILY SSF55120 103 233 1.15E-17 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS05060 7eccdd15d9b0810412f7e1c4fee76ec6 236 SMART SM00363 5 65 1.3E-5 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS05060 7eccdd15d9b0810412f7e1c4fee76ec6 236 Gene3D G3DSA:3.10.290.10 3 64 8.2E-18 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS05060 7eccdd15d9b0810412f7e1c4fee76ec6 236 SUPERFAMILY SSF55174 5 48 6.28E-11 T 13-09-2016 PMA3_RS23600 bf2ba4a444741f66b9d1870ca098179b 156 SUPERFAMILY SSF82784 3 151 2.09E-39 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS23600 bf2ba4a444741f66b9d1870ca098179b 156 Pfam PF02566 OsmC-like protein 51 149 9.5E-12 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS23600 bf2ba4a444741f66b9d1870ca098179b 156 Gene3D G3DSA:3.30.300.20 1 151 8.6E-57 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS25365 2e2489c63159a18d5649d5c07e83bfa2 297 PANTHER PTHR30177 26 297 4.0E-92 T 13-09-2016 PMA3_RS25365 2e2489c63159a18d5649d5c07e83bfa2 297 PANTHER PTHR30177:SF9 26 297 4.0E-92 T 13-09-2016 PMA3_RS25365 2e2489c63159a18d5649d5c07e83bfa2 297 Gene3D G3DSA:3.40.190.10 241 295 2.6E-15 T 13-09-2016 PMA3_RS25365 2e2489c63159a18d5649d5c07e83bfa2 297 Gene3D G3DSA:3.40.190.10 22 133 1.1E-34 T 13-09-2016 PMA3_RS25365 2e2489c63159a18d5649d5c07e83bfa2 297 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 293 7.4E-65 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS25365 2e2489c63159a18d5649d5c07e83bfa2 297 SUPERFAMILY SSF53850 26 295 1.19E-61 T 13-09-2016 PMA3_RS25365 2e2489c63159a18d5649d5c07e83bfa2 297 Gene3D G3DSA:3.40.190.120 134 234 5.5E-32 T 13-09-2016 PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 Pfam PF13489 Methyltransferase domain 149 277 4.1E-19 T 13-09-2016 PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 Pfam PF12840 Helix-turn-helix domain 21 75 1.6E-12 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 SMART SM00418 18 103 7.2E-11 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 Gene3D G3DSA:3.40.50.150 156 301 1.7E-30 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 7.0E-8 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 7.0E-8 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 7.0E-8 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 SUPERFAMILY SSF53335 127 308 5.81E-34 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 Gene3D G3DSA:1.10.10.10 7 86 7.7E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 SUPERFAMILY SSF46785 11 87 1.57E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 PANTHER PTHR10108:SF820 39 302 2.0E-37 T 13-09-2016 PMA3_RS28220 4d3b5124768bad6601e4d2c2f146934c 331 PANTHER PTHR10108 39 302 2.0E-37 T 13-09-2016 PMA3_RS03155 9d7c36acd65f939bf8ad7efa7cdaf683 205 Gene3D G3DSA:3.10.50.40 94 204 3.7E-45 T 13-09-2016 PMA3_RS03155 9d7c36acd65f939bf8ad7efa7cdaf683 205 PANTHER PTHR10516 6 67 3.5E-82 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS03155 9d7c36acd65f939bf8ad7efa7cdaf683 205 Gene3D G3DSA:1.10.287.460 2 93 1.9E-24 T 13-09-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PMA3_RS03155 9d7c36acd65f939bf8ad7efa7cdaf683 205 PANTHER PTHR10516 86 204 3.5E-82 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS03155 9d7c36acd65f939bf8ad7efa7cdaf683 205 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 202 1.1E-27 T 13-09-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PMA3_RS03155 9d7c36acd65f939bf8ad7efa7cdaf683 205 SUPERFAMILY SSF54534 7 204 9.23E-58 T 13-09-2016 PMA3_RS03155 9d7c36acd65f939bf8ad7efa7cdaf683 205 PANTHER PTHR10516:SF320 86 204 3.5E-82 T 13-09-2016 PMA3_RS03155 9d7c36acd65f939bf8ad7efa7cdaf683 205 PANTHER PTHR10516:SF320 6 67 3.5E-82 T 13-09-2016 PMA3_RS03155 9d7c36acd65f939bf8ad7efa7cdaf683 205 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 6.1E-24 T 13-09-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PMA3_RS08325 2119377067075cd9e05c9330720009c0 271 Gene3D G3DSA:3.90.226.10 13 202 3.4E-53 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS08325 2119377067075cd9e05c9330720009c0 271 PANTHER PTHR11941:SF86 1 261 3.3E-106 T 13-09-2016 PMA3_RS08325 2119377067075cd9e05c9330720009c0 271 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 13-09-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PMA3_RS08325 2119377067075cd9e05c9330720009c0 271 PANTHER PTHR11941 1 261 3.3E-106 T 13-09-2016 PMA3_RS08325 2119377067075cd9e05c9330720009c0 271 SUPERFAMILY SSF52096 11 262 4.54E-68 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS08325 2119377067075cd9e05c9330720009c0 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 262 3.6E-46 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS08325 2119377067075cd9e05c9330720009c0 271 Gene3D G3DSA:1.10.12.10 206 262 5.9E-13 T 13-09-2016 IPR014748 Crontonase, C-terminal PMA3_RS01940 8d6cbe219e502ef6bae2d670cc4e8ae3 202 PANTHER PTHR35602:SF3 1 192 1.8E-89 T 13-09-2016 PMA3_RS01940 8d6cbe219e502ef6bae2d670cc4e8ae3 202 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 187 1.4E-60 T 13-09-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA PMA3_RS01940 8d6cbe219e502ef6bae2d670cc4e8ae3 202 Gene3D G3DSA:3.40.50.1820 128 183 1.5E-17 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01940 8d6cbe219e502ef6bae2d670cc4e8ae3 202 Gene3D G3DSA:3.40.50.1820 4 96 1.5E-17 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01940 8d6cbe219e502ef6bae2d670cc4e8ae3 202 PANTHER PTHR35602 1 192 1.8E-89 T 13-09-2016 PMA3_RS01940 8d6cbe219e502ef6bae2d670cc4e8ae3 202 SUPERFAMILY SSF53474 5 186 1.56E-20 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 380 417 1.9E-5 T 13-09-2016 IPR022441 Parallel beta-helix repeat-2 PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 SUPERFAMILY SSF51126 167 451 3.44E-34 T 13-09-2016 IPR011050 Pectin lyase fold/virulence factor PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 SMART SM00710 314 337 28.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 SMART SM00710 339 361 1600.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 SMART SM00710 363 385 23.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 SMART SM00710 290 312 670.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 SMART SM00710 228 255 3500.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 SMART SM00710 386 408 1.6 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 Pfam PF13229 Right handed beta helix region 272 417 6.7E-15 T 13-09-2016 PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 PANTHER PTHR22990 273 422 2.2E-18 T 13-09-2016 PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 Gene3D G3DSA:2.160.20.10 245 425 1.4E-11 T 13-09-2016 IPR012334 Pectin lyase fold PMA3_RS24630 c641702186a4a16a734ace27caf85617 528 SMART SM00722 247 407 2.8E-10 T 13-09-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PMA3_RS19165 72e4e900d95a30c0699e58b2f40d715b 434 PANTHER PTHR10283:SF87 7 433 1.7E-161 T 13-09-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 PMA3_RS19165 72e4e900d95a30c0699e58b2f40d715b 434 Pfam PF03600 Citrate transporter 14 378 3.8E-46 T 13-09-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PMA3_RS19165 72e4e900d95a30c0699e58b2f40d715b 434 PANTHER PTHR10283 7 433 1.7E-161 T 13-09-2016 PMA3_RS19165 72e4e900d95a30c0699e58b2f40d715b 434 TIGRFAM TIGR00784 citMHS: citrate transporter 1 432 3.8E-197 T 13-09-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 PMA3_RS10630 07b6a0283d0db3bb8781588650f4ae16 467 Gene3D G3DSA:1.20.1250.20 256 464 2.5E-16 T 13-09-2016 PMA3_RS10630 07b6a0283d0db3bb8781588650f4ae16 467 SUPERFAMILY SSF103473 15 462 3.92E-75 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS10630 07b6a0283d0db3bb8781588650f4ae16 467 Pfam PF07690 Major Facilitator Superfamily 27 414 3.3E-49 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS10630 07b6a0283d0db3bb8781588650f4ae16 467 Gene3D G3DSA:1.20.1250.20 18 230 1.4E-44 T 13-09-2016 PMA3_RS10630 07b6a0283d0db3bb8781588650f4ae16 467 PANTHER PTHR11662:SF277 17 466 4.8E-142 T 13-09-2016 PMA3_RS10630 07b6a0283d0db3bb8781588650f4ae16 467 PANTHER PTHR11662 17 466 4.8E-142 T 13-09-2016 PMA3_RS22470 2f237a1c9ab4b8d4a39e3668f87332db 170 SUPERFAMILY SSF55729 28 147 4.77E-11 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22470 2f237a1c9ab4b8d4a39e3668f87332db 170 Gene3D G3DSA:3.40.630.30 34 149 3.0E-13 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22470 2f237a1c9ab4b8d4a39e3668f87332db 170 PANTHER PTHR36449 1 169 1.9E-38 T 13-09-2016 PMA3_RS22470 2f237a1c9ab4b8d4a39e3668f87332db 170 Pfam PF13508 Acetyltransferase (GNAT) domain 75 144 1.8E-6 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS09165 43a4a398cf3d5bd36688c0f03648f4c7 329 Pfam PF01032 FecCD transport family 14 324 1.4E-86 T 13-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PMA3_RS09165 43a4a398cf3d5bd36688c0f03648f4c7 329 PANTHER PTHR30472:SF17 10 329 1.3E-108 T 13-09-2016 PMA3_RS09165 43a4a398cf3d5bd36688c0f03648f4c7 329 SUPERFAMILY SSF81345 8 324 8.63E-76 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS09165 43a4a398cf3d5bd36688c0f03648f4c7 329 Gene3D G3DSA:1.10.3470.10 6 326 1.6E-95 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS09165 43a4a398cf3d5bd36688c0f03648f4c7 329 PANTHER PTHR30472 10 329 1.3E-108 T 13-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PMA3_RS27885 d34a2f5c4ec1993166af1a84764d240d 176 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 98 176 1.2E-20 T 13-09-2016 IPR022385 Rhs repeat-associated core GO:0097264 PMA3_RS27885 d34a2f5c4ec1993166af1a84764d240d 176 SUPERFAMILY SSF56399 139 171 1.67E-6 T 13-09-2016 PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 PANTHER PTHR24322 9 137 6.9E-60 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 PANTHER PTHR24322 153 185 6.9E-60 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 PANTHER PTHR24322:SF360 9 137 6.9E-60 T 13-09-2016 PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 PANTHER PTHR24322:SF360 153 185 6.9E-60 T 13-09-2016 PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 Gene3D G3DSA:3.40.50.720 4 228 2.7E-45 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.6E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.6E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.6E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.6E-13 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 SUPERFAMILY SSF51735 4 230 1.55E-46 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS07405 21d3f3acdc2ee3c1eefbab50d406459b 242 Pfam PF00106 short chain dehydrogenase 5 195 5.6E-35 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS09945 5d6be44a3edb0912a9eef9c5bedd0915 303 PANTHER PTHR31964:SF26 136 298 8.0E-13 T 13-09-2016 PMA3_RS09945 5d6be44a3edb0912a9eef9c5bedd0915 303 Pfam PF00582 Universal stress protein family 173 298 1.1E-13 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS09945 5d6be44a3edb0912a9eef9c5bedd0915 303 Gene3D G3DSA:3.40.50.620 141 298 3.2E-21 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS09945 5d6be44a3edb0912a9eef9c5bedd0915 303 Gene3D G3DSA:3.40.50.620 2 140 1.9E-8 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS09945 5d6be44a3edb0912a9eef9c5bedd0915 303 SUPERFAMILY SSF52402 4 143 1.42E-11 T 13-09-2016 PMA3_RS09945 5d6be44a3edb0912a9eef9c5bedd0915 303 SUPERFAMILY SSF52402 152 298 8.37E-20 T 13-09-2016 PMA3_RS09945 5d6be44a3edb0912a9eef9c5bedd0915 303 PANTHER PTHR31964 136 298 8.0E-13 T 13-09-2016 PMA3_RS16445 f650b618baf52bbf716737f681d8ecc3 259 Gene3D G3DSA:3.90.226.10 2 257 1.7E-63 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS16445 f650b618baf52bbf716737f681d8ecc3 259 PANTHER PTHR11941 3 256 4.7E-60 T 13-09-2016 PMA3_RS16445 f650b618baf52bbf716737f681d8ecc3 259 SUPERFAMILY SSF52096 1 258 9.82E-68 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS16445 f650b618baf52bbf716737f681d8ecc3 259 PANTHER PTHR11941:SF54 3 256 4.7E-60 T 13-09-2016 PMA3_RS16445 f650b618baf52bbf716737f681d8ecc3 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 258 5.6E-45 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 Pfam PF03466 LysR substrate binding domain 98 296 1.3E-29 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.2E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 PANTHER PTHR30118 1 305 2.0E-141 T 13-09-2016 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 Gene3D G3DSA:3.40.190.10 271 301 1.0E-8 T 13-09-2016 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 Gene3D G3DSA:3.40.190.10 90 178 7.4E-23 T 13-09-2016 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 Gene3D G3DSA:3.40.190.10 179 263 2.8E-28 T 13-09-2016 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 Gene3D G3DSA:1.10.10.10 1 84 4.0E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 SUPERFAMILY SSF53850 90 295 3.98E-47 T 13-09-2016 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 PANTHER PTHR30118:SF4 1 305 2.0E-141 T 13-09-2016 PMA3_RS07575 21ae6cff840223498749478a296fc7a0 309 SUPERFAMILY SSF46785 2 81 5.06E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19880 a042a6f5625432381b7653f321f5c108 363 Pfam PF07759 Protein of unknown function (DUF1615) 48 361 8.0E-147 T 13-09-2016 IPR011673 Protein of unknown function DUF1615 PMA3_RS19880 a042a6f5625432381b7653f321f5c108 363 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 12 361 1.0E-171 T 13-09-2016 IPR011673 Protein of unknown function DUF1615 PMA3_RS09965 1de4099292aaf5f9087fdae7fda0e902 312 Pfam PF05425 Copper resistance protein D 194 300 2.9E-21 T 13-09-2016 IPR008457 Copper resistance protein D GO:0016021 PMA3_RS09965 1de4099292aaf5f9087fdae7fda0e902 312 PANTHER PTHR34820 1 309 2.5E-25 T 13-09-2016 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PIRSF PIRSF001336 1 637 2.8E-251 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PANTHER PTHR11482:SF36 443 601 2.3E-252 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PANTHER PTHR11482:SF36 1 373 2.3E-252 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 12 637 42.534 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 546 559 1.3E-15 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 1.3E-15 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 130 142 1.3E-15 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 1.3E-15 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 107 125 1.3E-15 T 13-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 284 297 - T 13-09-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 TIGRFAM TIGR01273 speA: arginine decarboxylase 14 636 2.9E-269 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 Gene3D G3DSA:2.40.37.10 459 591 3.6E-14 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 Gene3D G3DSA:2.40.37.10 339 363 3.6E-14 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 Gene3D G3DSA:3.20.20.10 77 338 4.6E-58 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 355 565 5.4E-26 T 13-09-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PANTHER PTHR11482 443 601 2.3E-252 T 13-09-2016 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PANTHER PTHR11482 1 373 2.3E-252 T 13-09-2016 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 101 351 2.3E-44 T 13-09-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 SUPERFAMILY SSF50621 459 570 1.2E-6 T 13-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01180 Arginine decarboxylase signature 153 168 5.8E-69 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01180 Arginine decarboxylase signature 468 489 5.8E-69 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01180 Arginine decarboxylase signature 330 347 5.8E-69 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01180 Arginine decarboxylase signature 75 90 5.8E-69 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01180 Arginine decarboxylase signature 179 200 5.8E-69 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01180 Arginine decarboxylase signature 203 225 5.8E-69 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01180 Arginine decarboxylase signature 493 518 5.8E-69 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01180 Arginine decarboxylase signature 546 567 5.8E-69 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 PRINTS PR01180 Arginine decarboxylase signature 99 113 5.8E-69 T 13-09-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PMA3_RS02605 452495294b2631978fde3dcf8b82771b 637 SUPERFAMILY SSF51419 75 352 4.49E-66 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS24365 f557a260c4d96905974d2cdf647f8ec2 119 Pfam PF07885 Ion channel 30 102 7.9E-15 T 13-09-2016 IPR013099 Potassium channel domain PMA3_RS24365 f557a260c4d96905974d2cdf647f8ec2 119 SUPERFAMILY SSF81324 20 100 5.63E-17 T 13-09-2016 PMA3_RS24365 f557a260c4d96905974d2cdf647f8ec2 119 Gene3D G3DSA:1.10.287.70 8 101 1.4E-15 T 13-09-2016 PMA3_RS11895 a70783dce4a7a52ead84999f66f2c447 155 Gene3D G3DSA:3.30.530.20 10 84 2.3E-8 T 13-09-2016 IPR023393 START-like domain PMA3_RS11895 a70783dce4a7a52ead84999f66f2c447 155 SUPERFAMILY SSF55961 9 153 4.3E-18 T 13-09-2016 PMA3_RS11895 a70783dce4a7a52ead84999f66f2c447 155 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 9 86 2.2E-6 T 13-09-2016 IPR019587 Polyketide cyclase/dehydrase PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 SUPERFAMILY SSF52540 7 204 4.19E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 SUPERFAMILY SSF52540 452 568 4.19E-48 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 SUPERFAMILY SSF52540 613 909 9.52E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.719 T 13-09-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:1.20.1580.10 251 284 4.1E-53 T 13-09-2016 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:1.20.1580.10 91 129 4.1E-53 T 13-09-2016 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:1.20.1580.10 406 476 4.1E-53 T 13-09-2016 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 PANTHER PTHR32282:SF2 2 944 0.0 T 13-09-2016 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:1.20.1580.10 693 819 1.1E-51 T 13-09-2016 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 PANTHER PTHR32282 2 944 0.0 T 13-09-2016 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:3.40.50.300 604 673 2.5E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:3.40.50.300 477 596 1.0E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:3.40.50.300 820 940 2.5E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:3.40.50.300 4 89 1.0E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 13-09-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:3.30.1490.20 200 248 2.8E-28 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:3.30.1490.20 130 153 2.8E-28 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS27125 a2f6291d322b4355849398fd2db79d20 944 Gene3D G3DSA:1.10.8.280 286 405 6.0E-41 T 13-09-2016 PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 Gene3D G3DSA:3.30.70.1450 415 482 3.5E-7 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 SMART SM01091 491 570 4.2E-15 T 13-09-2016 IPR005170 Transporter-associated domain PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 PANTHER PTHR32507:SF7 1 570 1.1E-277 T 13-09-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 SUPERFAMILY SSF56176 496 568 4.36E-9 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 Pfam PF02080 TrkA-C domain 416 482 3.8E-13 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 Pfam PF00999 Sodium/hydrogen exchanger family 15 387 2.8E-54 T 13-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 SUPERFAMILY SSF116726 410 482 2.88E-11 T 13-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 Pfam PF03471 Transporter associated domain 495 568 2.0E-12 T 13-09-2016 IPR005170 Transporter-associated domain PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 PANTHER PTHR32507 1 570 1.1E-277 T 13-09-2016 PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 573 51.766 T 13-09-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 PMA3_RS01705 1888449b46994a4a9e326dc398220883 580 Gene3D G3DSA:3.30.465.10 496 567 2.3E-10 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 PANTHER PTHR30146 1 327 4.7E-158 T 13-09-2016 PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 SUPERFAMILY SSF53822 61 314 2.16E-47 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 327 4.4E-137 T 13-09-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 Gene3D G3DSA:1.10.260.40 2 60 2.5E-22 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 Gene3D G3DSA:3.40.50.2300 167 326 6.5E-31 T 13-09-2016 PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 Gene3D G3DSA:3.40.50.2300 61 166 9.7E-28 T 13-09-2016 PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 246 1.3E-19 T 13-09-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 SMART SM00354 1 73 8.3E-25 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 SUPERFAMILY SSF47413 2 58 6.88E-14 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 2.4E-16 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS25430 0a8f4349085768c33ea476dbd236ce90 331 PANTHER PTHR30146:SF25 1 327 4.7E-158 T 13-09-2016 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 274 336 6.0E-27 T 13-09-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 Gene3D G3DSA:1.10.8.60 278 340 2.5E-32 T 13-09-2016 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 SUPERFAMILY SSF51569 5 278 2.2E-62 T 13-09-2016 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 6 338 1.2E-166 T 13-09-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 PANTHER PTHR10277:SF3 1 265 8.0E-98 T 13-09-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 SUPERFAMILY SSF89000 290 339 8.24E-16 T 13-09-2016 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 Pfam PF07836 DmpG-like communication domain 276 337 1.8E-29 T 13-09-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 342 209.006 T 13-09-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 Gene3D G3DSA:3.20.20.70 6 263 3.7E-50 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 PANTHER PTHR10277 1 265 8.0E-98 T 13-09-2016 PMA3_RS11735 4ca149a8aa332b807524da73ed33ccc9 342 Pfam PF00682 HMGL-like 9 264 4.3E-53 T 13-09-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PMA3_RS13000 fe3f5ae3678db1cf5250fdf65815bf31 493 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS13000 fe3f5ae3678db1cf5250fdf65815bf31 493 PANTHER PTHR24096 3 408 5.3E-66 T 13-09-2016 PMA3_RS13000 fe3f5ae3678db1cf5250fdf65815bf31 493 Gene3D G3DSA:3.40.50.980 7 152 1.9E-18 T 13-09-2016 PMA3_RS13000 fe3f5ae3678db1cf5250fdf65815bf31 493 SUPERFAMILY SSF56801 8 481 2.49E-82 T 13-09-2016 PMA3_RS13000 fe3f5ae3678db1cf5250fdf65815bf31 493 Gene3D G3DSA:3.40.50.980 153 315 1.1E-27 T 13-09-2016 PMA3_RS13000 fe3f5ae3678db1cf5250fdf65815bf31 493 Gene3D G3DSA:2.30.38.10 316 369 2.1E-6 T 13-09-2016 PMA3_RS13000 fe3f5ae3678db1cf5250fdf65815bf31 493 Pfam PF00501 AMP-binding enzyme 13 379 1.8E-53 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 PANTHER PTHR11019 61 327 4.1E-77 T 13-09-2016 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 SUPERFAMILY SSF46689 219 270 2.69E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 Pfam PF01965 DJ-1/PfpI family 16 179 1.5E-13 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 Gene3D G3DSA:3.40.50.880 13 226 3.5E-42 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 Gene3D G3DSA:1.10.10.60 273 319 6.0E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 273 315 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 SUPERFAMILY SSF46689 272 319 2.33E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 SUPERFAMILY SSF52317 11 201 1.66E-45 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 Pfam PF12833 Helix-turn-helix domain 242 319 7.0E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 265 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 SMART SM00342 236 319 3.8E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 PANTHER PTHR11019:SF90 12 35 4.1E-77 T 13-09-2016 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 PANTHER PTHR11019:SF90 61 327 4.1E-77 T 13-09-2016 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 PANTHER PTHR11019 12 35 4.1E-77 T 13-09-2016 PMA3_RS19275 1429d3c6806fe5d2e6c35a9a8076149f 363 Gene3D G3DSA:1.10.10.60 227 272 1.4E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS28495 b1545c1c37493aa04dfac82f8cf49e53 206 Gene3D G3DSA:3.40.50.150 12 173 5.1E-27 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS28495 b1545c1c37493aa04dfac82f8cf49e53 206 PANTHER PTHR10108:SF831 1 166 3.6E-80 T 13-09-2016 PMA3_RS28495 b1545c1c37493aa04dfac82f8cf49e53 206 SUPERFAMILY SSF53335 3 188 1.07E-31 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS28495 b1545c1c37493aa04dfac82f8cf49e53 206 PANTHER PTHR10108 1 166 3.6E-80 T 13-09-2016 PMA3_RS28495 b1545c1c37493aa04dfac82f8cf49e53 206 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 3.4E-95 T 13-09-2016 IPR010743 Methionine biosynthesis MetW PMA3_RS28495 b1545c1c37493aa04dfac82f8cf49e53 206 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 195 2.1E-90 T 13-09-2016 IPR010743 Methionine biosynthesis MetW PMA3_RS21280 f511ac5e611e69fe54fea3a17b2788b0 124 SUPERFAMILY SSF81343 2 124 5.72E-33 T 13-09-2016 PMA3_RS21280 f511ac5e611e69fe54fea3a17b2788b0 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 118 6.4E-29 T 13-09-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 PMA3_RS21280 f511ac5e611e69fe54fea3a17b2788b0 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 13-09-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 PMA3_RS21280 f511ac5e611e69fe54fea3a17b2788b0 124 PIRSF PIRSF000178 1 124 8.7E-29 T 13-09-2016 PMA3_RS21280 f511ac5e611e69fe54fea3a17b2788b0 124 PANTHER PTHR10978 1 124 1.1E-60 T 13-09-2016 PMA3_RS21280 f511ac5e611e69fe54fea3a17b2788b0 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 13-09-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 PMA3_RS21280 f511ac5e611e69fe54fea3a17b2788b0 124 Gene3D G3DSA:1.20.1300.10 2 124 1.3E-39 T 13-09-2016 PMA3_RS21280 f511ac5e611e69fe54fea3a17b2788b0 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 122 2.8E-39 T 13-09-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 PMA3_RS21280 f511ac5e611e69fe54fea3a17b2788b0 124 PANTHER PTHR10978:SF4 1 124 1.1E-60 T 13-09-2016 PMA3_RS21100 707e8bf986e6d4759a755cb58ef416da 173 PANTHER PTHR34848 1 171 2.3E-72 T 13-09-2016 PMA3_RS21100 707e8bf986e6d4759a755cb58ef416da 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 168 6.0E-60 T 13-09-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 PMA3_RS21100 707e8bf986e6d4759a755cb58ef416da 173 Gene3D G3DSA:3.40.50.300 3 169 9.8E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21100 707e8bf986e6d4759a755cb58ef416da 173 PIRSF PIRSF006135 1 171 8.4E-54 T 13-09-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 PMA3_RS21100 707e8bf986e6d4759a755cb58ef416da 173 SUPERFAMILY SSF52540 3 169 7.53E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02735 692e5910612c27d82bf7ab16c6354955 207 Pfam PF02581 Thiamine monophosphate synthase/TENI 6 184 3.1E-57 T 13-09-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PMA3_RS02735 692e5910612c27d82bf7ab16c6354955 207 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 206 25.416 T 13-09-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PMA3_RS02735 692e5910612c27d82bf7ab16c6354955 207 PANTHER PTHR20857 1 206 2.7E-55 T 13-09-2016 PMA3_RS02735 692e5910612c27d82bf7ab16c6354955 207 SUPERFAMILY SSF51391 3 200 1.83E-61 T 13-09-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PMA3_RS02735 692e5910612c27d82bf7ab16c6354955 207 Gene3D G3DSA:3.20.20.70 4 199 1.3E-63 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS02735 692e5910612c27d82bf7ab16c6354955 207 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 197 2.2E-60 T 13-09-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PMA3_RS26730 98c061f8eba834d0059643783d13470f 175 SUPERFAMILY SSF50324 3 174 5.49E-69 T 13-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PMA3_RS26730 98c061f8eba834d0059643783d13470f 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 13-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PMA3_RS26730 98c061f8eba834d0059643783d13470f 175 Pfam PF00719 Inorganic pyrophosphatase 18 174 7.1E-54 T 13-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PMA3_RS26730 98c061f8eba834d0059643783d13470f 175 Gene3D G3DSA:3.90.80.10 3 174 4.8E-62 T 13-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PMA3_RS26730 98c061f8eba834d0059643783d13470f 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.536 T 13-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PMA3_RS26730 98c061f8eba834d0059643783d13470f 175 PANTHER PTHR10286 6 174 4.8E-72 T 13-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PMA3_RS13145 4377a60ca58afa45e765525ccdfeab9e 180 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 6.3E-26 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS13145 4377a60ca58afa45e765525ccdfeab9e 180 Gene3D G3DSA:3.40.630.30 2 178 6.9E-36 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS13145 4377a60ca58afa45e765525ccdfeab9e 180 SUPERFAMILY SSF55729 2 161 3.73E-32 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS13145 4377a60ca58afa45e765525ccdfeab9e 180 PANTHER PTHR13256 6 180 1.9E-24 T 13-09-2016 PMA3_RS09555 a664ac453723ed96e422bc506b93fe53 275 SUPERFAMILY SSF47413 26 74 1.39E-5 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS09555 a664ac453723ed96e422bc506b93fe53 275 Gene3D G3DSA:1.10.260.40 27 74 3.4E-6 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS14110 ba63346846888e4418997dbd81f6ed44 221 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 141 208 1.2E-11 T 13-09-2016 IPR018660 C-type lysozyme, inhibitor PMA3_RS14110 ba63346846888e4418997dbd81f6ed44 221 PANTHER PTHR37549 9 217 1.0E-15 T 13-09-2016 PMA3_RS14110 ba63346846888e4418997dbd81f6ed44 221 SUPERFAMILY SSF141488 136 213 8.24E-11 T 13-09-2016 IPR018660 C-type lysozyme, inhibitor PMA3_RS14110 ba63346846888e4418997dbd81f6ed44 221 PANTHER PTHR37549:SF1 9 217 1.0E-15 T 13-09-2016 PMA3_RS29965 df7c1f04deae045580ccf65b9d81e0e8 398 Pfam PF11340 Protein of unknown function (DUF3142) 83 304 1.5E-101 T 13-09-2016 IPR021488 Protein of unknown function DUF3142 PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 Gene3D G3DSA:3.30.70.600 3 102 1.0E-43 T 13-09-2016 IPR027486 Ribosomal protein S10 domain PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.3E-46 T 13-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 SUPERFAMILY SSF54999 6 101 1.16E-36 T 13-09-2016 IPR027486 Ribosomal protein S10 domain PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.096 T 13-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 5.7E-18 T 13-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 5.7E-18 T 13-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 5.7E-18 T 13-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 PANTHER PTHR11700 1 102 7.9E-54 T 13-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 SMART SM01403 7 101 1.7E-55 T 13-09-2016 IPR027486 Ribosomal protein S10 domain PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.9E-35 T 13-09-2016 IPR027486 Ribosomal protein S10 domain PMA3_RS27270 6edcb6c8fe0e2b3fab0ef75102b811fc 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 13-09-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 SMART SM00228 109 180 5.0E-18 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 SUPERFAMILY SSF52096 200 377 9.77E-82 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 SUPERFAMILY SSF52096 45 127 9.77E-82 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 Gene3D G3DSA:3.30.750.44 65 114 1.4E-10 T 13-09-2016 PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 SUPERFAMILY SSF50156 101 183 1.32E-19 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 PANTHER PTHR32060 62 395 3.5E-120 T 13-09-2016 PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 Pfam PF03572 Peptidase family S41 207 372 4.8E-57 T 13-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 384 2.3E-106 T 13-09-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 Gene3D G3DSA:3.90.226.10 412 432 7.8E-68 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 Gene3D G3DSA:3.90.226.10 191 375 7.8E-68 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 Pfam PF13180 PDZ domain 109 181 4.6E-11 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 SMART SM00245 181 373 6.4E-71 T 13-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PMA3_RS01120 682363d36b2fd14690fc745f7ad0ff91 439 Gene3D G3DSA:2.30.42.10 115 190 1.9E-27 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 SMART SM00345 14 73 6.7E-19 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 SMART SM00895 97 223 4.7E-19 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 SUPERFAMILY SSF48008 92 228 1.07E-23 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 Pfam PF07729 FCD domain 97 222 7.5E-20 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 SUPERFAMILY SSF46785 1 77 1.07E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 Gene3D G3DSA:1.10.10.10 3 75 4.6E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.5E-20 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 PANTHER PTHR11751 14 113 6.9E-22 T 13-09-2016 PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.6E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.6E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS14380 66eaa7183738a039ac1dc22a6f7815ad 232 Gene3D G3DSA:1.20.120.530 92 230 1.2E-25 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS17380 d06917796ec52bbc191dde6cf87bd029 252 Pfam PF09836 Putative DNA-binding domain 8 94 4.0E-20 T 13-09-2016 IPR018640 Putative DNA-binding domain, bacteria PMA3_RS04550 e19a18c05a98c49f11a91fd34cd412d1 269 Gene3D G3DSA:1.10.3720.10 11 258 2.3E-47 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04550 e19a18c05a98c49f11a91fd34cd412d1 269 SUPERFAMILY SSF161098 10 257 7.46E-49 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04550 e19a18c05a98c49f11a91fd34cd412d1 269 PANTHER PTHR30193 1 268 2.5E-74 T 13-09-2016 PMA3_RS04550 e19a18c05a98c49f11a91fd34cd412d1 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 250 5.9E-13 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04550 e19a18c05a98c49f11a91fd34cd412d1 269 PANTHER PTHR30193:SF20 1 268 2.5E-74 T 13-09-2016 PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 PANTHER PTHR24220:SF572 5 376 4.1E-154 T 13-09-2016 PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 PANTHER PTHR24220 5 376 4.1E-154 T 13-09-2016 PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 Gene3D G3DSA:2.40.50.100 344 358 1.2E-14 T 13-09-2016 PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 Gene3D G3DSA:2.40.50.100 239 284 1.2E-14 T 13-09-2016 PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 SMART SM00382 28 211 4.4E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 SUPERFAMILY SSF52540 4 242 1.73E-85 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 Pfam PF00005 ABC transporter 19 161 3.8E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 SUPERFAMILY SSF50331 236 355 5.59E-27 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 Gene3D G3DSA:2.40.50.140 285 343 2.7E-13 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 Pfam PF08402 TOBE domain 280 350 2.8E-15 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS22735 84d7ad45b34d4e90ffb18254356903af 381 Gene3D G3DSA:3.40.50.300 4 235 3.3E-78 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28550 2de17e1c14326d19541a59299cb78ad9 340 PIRSF PIRSF003097 42 336 1.2E-66 T 13-09-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 PMA3_RS28550 2de17e1c14326d19541a59299cb78ad9 340 Pfam PF02687 FtsX-like permease family 214 332 1.1E-8 T 13-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PMA3_RS13505 51730ef0c378c5f6781d401a39d3422c 446 PIRSF PIRSF006060 1 445 2.3E-55 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS13505 51730ef0c378c5f6781d401a39d3422c 446 PANTHER PTHR11785:SF341 4 431 1.9E-130 T 13-09-2016 PMA3_RS13505 51730ef0c378c5f6781d401a39d3422c 446 Pfam PF13520 Amino acid permease 10 405 5.1E-47 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS13505 51730ef0c378c5f6781d401a39d3422c 446 PANTHER PTHR11785 4 431 1.9E-130 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS02375 1cbca1a7552d9c5bd4a74642bd44afd5 1748 SUPERFAMILY SSF52058 1177 1338 1.53E-23 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS02375 1cbca1a7552d9c5bd4a74642bd44afd5 1748 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 1406 1637 3.1E-41 T 13-09-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- PMA3_RS02375 1cbca1a7552d9c5bd4a74642bd44afd5 1748 PANTHER PTHR23155 1187 1308 4.7E-12 T 13-09-2016 PMA3_RS02375 1cbca1a7552d9c5bd4a74642bd44afd5 1748 Pfam PF13855 Leucine rich repeat 1202 1260 5.3E-7 T 13-09-2016 IPR001611 Leucine-rich repeat GO:0005515 PMA3_RS02375 1cbca1a7552d9c5bd4a74642bd44afd5 1748 Gene3D G3DSA:1.20.1270.130 1413 1475 2.5E-6 T 13-09-2016 PMA3_RS02375 1cbca1a7552d9c5bd4a74642bd44afd5 1748 Gene3D G3DSA:1.20.58.360 1479 1637 3.1E-28 T 13-09-2016 PMA3_RS02375 1cbca1a7552d9c5bd4a74642bd44afd5 1748 SMART SM00369 1224 1247 0.12 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02375 1cbca1a7552d9c5bd4a74642bd44afd5 1748 SMART SM00369 1295 1318 22.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02375 1cbca1a7552d9c5bd4a74642bd44afd5 1748 Gene3D G3DSA:3.80.10.10 1177 1337 9.8E-24 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS01075 1aabc837c472c0a3efd9d724bf84f701 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 34 176 1.9E-62 T 13-09-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PMA3_RS01075 1aabc837c472c0a3efd9d724bf84f701 197 PANTHER PTHR23133 1 197 1.1E-99 T 13-09-2016 PMA3_RS01075 1aabc837c472c0a3efd9d724bf84f701 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 13-09-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PMA3_RS01075 1aabc837c472c0a3efd9d724bf84f701 197 Gene3D G3DSA:3.30.230.40 92 197 1.3E-31 T 13-09-2016 PMA3_RS01075 1aabc837c472c0a3efd9d724bf84f701 197 SUPERFAMILY SSF54211 4 88 5.18E-32 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS01075 1aabc837c472c0a3efd9d724bf84f701 197 Gene3D G3DSA:3.30.230.40 3 91 7.6E-36 T 13-09-2016 PMA3_RS01075 1aabc837c472c0a3efd9d724bf84f701 197 PANTHER PTHR23133:SF2 1 197 1.1E-99 T 13-09-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PMA3_RS01075 1aabc837c472c0a3efd9d724bf84f701 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 13-09-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PMA3_RS01075 1aabc837c472c0a3efd9d724bf84f701 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 42.607 T 13-09-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PMA3_RS01075 1aabc837c472c0a3efd9d724bf84f701 197 SUPERFAMILY SSF54211 89 181 2.66E-35 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS28000 a252a3828ecaa9281d80b63c72f6f991 256 Gene3D G3DSA:3.40.50.620 24 254 1.6E-23 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS28000 a252a3828ecaa9281d80b63c72f6f991 256 SMART SM00893 11 195 9.1E-5 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS28000 a252a3828ecaa9281d80b63c72f6f991 256 Pfam PF01012 Electron transfer flavoprotein domain 26 178 1.0E-15 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS28000 a252a3828ecaa9281d80b63c72f6f991 256 SUPERFAMILY SSF52402 24 213 5.51E-24 T 13-09-2016 PMA3_RS27865 20fac4329c3eeacebc635bc50b5d1c2c 376 PANTHER PTHR34219 1 363 3.9E-74 T 13-09-2016 PMA3_RS27865 20fac4329c3eeacebc635bc50b5d1c2c 376 PANTHER PTHR34219:SF3 1 363 3.9E-74 T 13-09-2016 PMA3_RS27865 20fac4329c3eeacebc635bc50b5d1c2c 376 Pfam PF03929 PepSY-associated TM region 12 361 1.2E-51 T 13-09-2016 IPR005625 PepSY-associated TM protein PMA3_RS23250 d83f9d306bbeca700c7b992439f704d3 231 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 210 2.5E-44 T 13-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PMA3_RS23250 d83f9d306bbeca700c7b992439f704d3 231 TIGRFAM TIGR02796 tolQ: protein TolQ 10 224 3.5E-92 T 13-09-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 PMA3_RS23250 d83f9d306bbeca700c7b992439f704d3 231 PANTHER PTHR30625 10 231 4.3E-76 T 13-09-2016 PMA3_RS23250 d83f9d306bbeca700c7b992439f704d3 231 PANTHER PTHR30625:SF3 10 231 4.3E-76 T 13-09-2016 PMA3_RS09270 de4ad49ccb6cffddae52508d65fd94b2 63 PANTHER PTHR34984:SF1 1 53 1.4E-29 T 13-09-2016 PMA3_RS09270 de4ad49ccb6cffddae52508d65fd94b2 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 53 2.5E-28 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS09270 de4ad49ccb6cffddae52508d65fd94b2 63 PANTHER PTHR34984 1 53 1.4E-29 T 13-09-2016 PMA3_RS09270 de4ad49ccb6cffddae52508d65fd94b2 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS09270 de4ad49ccb6cffddae52508d65fd94b2 63 SUPERFAMILY SSF117130 1 53 1.7E-21 T 13-09-2016 PMA3_RS09270 de4ad49ccb6cffddae52508d65fd94b2 63 Hamap MF_00167 Carbon storage regulator [csrA]. 1 63 20.77 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS09270 de4ad49ccb6cffddae52508d65fd94b2 63 Pfam PF02599 Global regulator protein family 1 52 1.4E-28 T 13-09-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 SUPERFAMILY SSF89360 3 100 1.16E-19 T 13-09-2016 IPR000361 FeS cluster biogenesis PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 SUPERFAMILY SSF117916 98 187 1.92E-24 T 13-09-2016 PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 PANTHER PTHR10072:SF37 1 100 8.1E-76 T 13-09-2016 PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 PANTHER PTHR10072 150 191 8.1E-76 T 13-09-2016 PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 Gene3D G3DSA:2.60.300.12 2 97 3.2E-15 T 13-09-2016 IPR000361 FeS cluster biogenesis PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 3.0E-23 T 13-09-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 Pfam PF01106 NifU-like domain 114 180 1.8E-20 T 13-09-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 100 1.4E-9 T 13-09-2016 IPR000361 FeS cluster biogenesis PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 PANTHER PTHR10072:SF37 150 191 8.1E-76 T 13-09-2016 PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 PANTHER PTHR10072 1 100 8.1E-76 T 13-09-2016 PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 1.4E-91 T 13-09-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 PMA3_RS12245 b690efd0412cc15c0d45412cf2de91bf 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 42.15 T 13-09-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 PMA3_RS24885 aa8f61b54f850601438b209bca904bcf 319 PANTHER PTHR30204:SF19 15 260 1.5E-35 T 13-09-2016 PMA3_RS24885 aa8f61b54f850601438b209bca904bcf 319 PANTHER PTHR30204 15 260 1.5E-35 T 13-09-2016 PMA3_RS24885 aa8f61b54f850601438b209bca904bcf 319 Pfam PF13411 MerR HTH family regulatory protein 24 90 1.2E-16 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS24885 aa8f61b54f850601438b209bca904bcf 319 SUPERFAMILY SSF46955 23 106 3.66E-18 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS24885 aa8f61b54f850601438b209bca904bcf 319 Gene3D G3DSA:1.10.1660.10 24 126 2.3E-19 T 13-09-2016 PMA3_RS24885 aa8f61b54f850601438b209bca904bcf 319 SMART SM00422 23 92 1.3E-20 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS16450 0f3851b5e43b1103bf0f3beadf9e5aa5 402 PANTHER PTHR24023:SF593 23 384 1.2E-42 T 13-09-2016 PMA3_RS16450 0f3851b5e43b1103bf0f3beadf9e5aa5 402 Gene3D G3DSA:3.30.1540.10 222 303 8.6E-29 T 13-09-2016 PMA3_RS16450 0f3851b5e43b1103bf0f3beadf9e5aa5 402 Pfam PF02515 CoA-transferase family III 4 374 3.7E-128 T 13-09-2016 IPR003673 CoA-transferase family III GO:0003824 PMA3_RS16450 0f3851b5e43b1103bf0f3beadf9e5aa5 402 Gene3D G3DSA:3.40.50.10540 2 215 2.7E-112 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS16450 0f3851b5e43b1103bf0f3beadf9e5aa5 402 Gene3D G3DSA:3.40.50.10540 304 397 2.7E-112 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS16450 0f3851b5e43b1103bf0f3beadf9e5aa5 402 SUPERFAMILY SSF89796 1 397 2.35E-136 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS16450 0f3851b5e43b1103bf0f3beadf9e5aa5 402 PANTHER PTHR24023 23 384 1.2E-42 T 13-09-2016 PMA3_RS21005 79e0f415eb7d45944bb2fed459972e60 308 SMART SM00267 136 307 5.1E-55 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS21005 79e0f415eb7d45944bb2fed459972e60 308 SUPERFAMILY SSF55073 152 306 4.79E-47 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS21005 79e0f415eb7d45944bb2fed459972e60 308 PANTHER PTHR10799:SF750 180 306 1.2E-27 T 13-09-2016 PMA3_RS21005 79e0f415eb7d45944bb2fed459972e60 308 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 306 5.8E-48 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS21005 79e0f415eb7d45944bb2fed459972e60 308 PANTHER PTHR10799 180 306 1.2E-27 T 13-09-2016 PMA3_RS21005 79e0f415eb7d45944bb2fed459972e60 308 PANTHER PTHR10799 28 35 1.2E-27 T 13-09-2016 PMA3_RS21005 79e0f415eb7d45944bb2fed459972e60 308 Gene3D G3DSA:3.30.70.270 149 306 1.3E-52 T 13-09-2016 PMA3_RS21005 79e0f415eb7d45944bb2fed459972e60 308 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 303 9.7E-44 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS21005 79e0f415eb7d45944bb2fed459972e60 308 PANTHER PTHR10799:SF750 28 35 1.2E-27 T 13-09-2016 PMA3_RS15350 6d82997d9336b87524c010d674e555ff 186 PANTHER PTHR30543 1 185 3.3E-50 T 13-09-2016 PMA3_RS15350 6d82997d9336b87524c010d674e555ff 186 Gene3D G3DSA:3.40.50.360 3 184 8.0E-49 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS15350 6d82997d9336b87524c010d674e555ff 186 PANTHER PTHR30543:SF6 1 185 3.3E-50 T 13-09-2016 PMA3_RS15350 6d82997d9336b87524c010d674e555ff 186 SUPERFAMILY SSF52218 6 162 5.53E-44 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS15350 6d82997d9336b87524c010d674e555ff 186 Pfam PF03358 NADPH-dependent FMN reductase 7 150 3.7E-35 T 13-09-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 PANTHER PTHR11757 20 684 1.2E-286 T 13-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 535 555 1.5E-53 T 13-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 593 608 1.5E-53 T 13-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 451 469 1.5E-53 T 13-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 611 633 1.5E-53 T 13-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 505 524 1.5E-53 T 13-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 477 501 1.5E-53 T 13-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 PANTHER PTHR11757:SF3 20 684 1.2E-286 T 13-09-2016 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 16 408 8.7E-78 T 13-09-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 Gene3D G3DSA:2.130.10.120 69 412 6.1E-89 T 13-09-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 Pfam PF00326 Prolyl oligopeptidase family 467 682 4.2E-69 T 13-09-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 SUPERFAMILY SSF50993 15 416 7.59E-80 T 13-09-2016 PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 SUPERFAMILY SSF53474 421 660 7.33E-44 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS22315 2060abdb62e5a987cf07686a50473c00 684 Gene3D G3DSA:3.40.50.1820 424 663 1.7E-35 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS27505 e87e903f057adc7a95dc888e5323bcad 415 PANTHER PTHR30193 3 71 3.0E-155 T 13-09-2016 PMA3_RS27505 e87e903f057adc7a95dc888e5323bcad 415 Gene3D G3DSA:1.10.3720.10 33 59 3.8E-48 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS27505 e87e903f057adc7a95dc888e5323bcad 415 Gene3D G3DSA:1.10.3720.10 176 409 3.8E-48 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS27505 e87e903f057adc7a95dc888e5323bcad 415 PANTHER PTHR30193 175 413 3.0E-155 T 13-09-2016 PMA3_RS27505 e87e903f057adc7a95dc888e5323bcad 415 SUPERFAMILY SSF161098 27 53 7.93E-46 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS27505 e87e903f057adc7a95dc888e5323bcad 415 SUPERFAMILY SSF161098 190 406 7.93E-46 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS27505 e87e903f057adc7a95dc888e5323bcad 415 PANTHER PTHR30193:SF8 175 413 3.0E-155 T 13-09-2016 PMA3_RS27505 e87e903f057adc7a95dc888e5323bcad 415 PANTHER PTHR30193:SF8 3 71 3.0E-155 T 13-09-2016 PMA3_RS27505 e87e903f057adc7a95dc888e5323bcad 415 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 216 406 6.3E-9 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28755 ef244dcced5a1b4c5fc6b1cdc7293611 248 PANTHER PTHR17985 2 237 3.8E-74 T 13-09-2016 IPR008551 Transport and Golgi organisation protein 2 PMA3_RS28755 ef244dcced5a1b4c5fc6b1cdc7293611 248 Pfam PF05742 Transport and Golgi organisation 2 1 234 2.6E-59 T 13-09-2016 IPR008551 Transport and Golgi organisation protein 2 PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 SUPERFAMILY SSF46689 213 264 3.79E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 PANTHER PTHR11019 1 321 2.5E-56 T 13-09-2016 PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 Gene3D G3DSA:1.10.10.60 267 318 1.5E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 SUPERFAMILY SSF51182 51 88 4.65E-6 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 SMART SM00342 230 313 5.2E-28 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 PANTHER PTHR11019:SF77 1 321 2.5E-56 T 13-09-2016 PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 Pfam PF12833 Helix-turn-helix domain 236 314 8.8E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 SUPERFAMILY SSF46689 266 316 9.32E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 Gene3D G3DSA:1.10.10.60 211 266 9.1E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 Pfam PF12852 Cupin 2 197 7.4E-43 T 13-09-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 Gene3D G3DSA:2.60.120.10 53 90 2.7E-5 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS17350 41f7e83723a8158a2c2fc743c2cf25fa 330 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 309 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS12285 4f87a9cbe6728af34f864ab90d2483bd 203 PANTHER PTHR35023:SF1 17 203 4.4E-35 T 13-09-2016 PMA3_RS12285 4f87a9cbe6728af34f864ab90d2483bd 203 PANTHER PTHR35023 17 203 4.4E-35 T 13-09-2016 PMA3_RS12285 4f87a9cbe6728af34f864ab90d2483bd 203 SUPERFAMILY SSF53300 49 159 1.8E-11 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS12285 4f87a9cbe6728af34f864ab90d2483bd 203 Pfam PF13519 von Willebrand factor type A domain 48 153 1.5E-8 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15860 5694daf95d82f1c387cc4ecd45816f3b 395 PANTHER PTHR11751 12 386 7.6E-121 T 13-09-2016 PMA3_RS15860 5694daf95d82f1c387cc4ecd45816f3b 395 Gene3D G3DSA:3.40.640.10 47 255 3.8E-68 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS15860 5694daf95d82f1c387cc4ecd45816f3b 395 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 13-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PMA3_RS15860 5694daf95d82f1c387cc4ecd45816f3b 395 PANTHER PTHR11751:SF301 12 386 7.6E-121 T 13-09-2016 PMA3_RS15860 5694daf95d82f1c387cc4ecd45816f3b 395 Gene3D G3DSA:3.90.1150.10 256 386 1.3E-34 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS15860 5694daf95d82f1c387cc4ecd45816f3b 395 SUPERFAMILY SSF53383 16 386 3.85E-107 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS15860 5694daf95d82f1c387cc4ecd45816f3b 395 Pfam PF00155 Aminotransferase class I and II 33 382 4.3E-64 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 Gene3D G3DSA:3.40.50.80 94 202 2.1E-22 T 13-09-2016 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 Gene3D G3DSA:3.10.20.30 203 301 4.2E-23 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 SUPERFAMILY SSF52343 86 209 4.85E-26 T 13-09-2016 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 SUPERFAMILY SSF54292 199 306 1.7E-25 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 Pfam PF00175 Oxidoreductase NAD-binding domain 100 147 4.1E-5 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 227 297 5.8E-11 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 PANTHER PTHR22924 8 262 8.0E-61 T 13-09-2016 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 255 263 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 SUPERFAMILY SSF63380 2 88 6.99E-25 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 PRINTS PR00409 Phthalate dioxygenase reductase family signature 18 28 1.7E-32 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 PRINTS PR00409 Phthalate dioxygenase reductase family signature 28 40 1.7E-32 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 PRINTS PR00409 Phthalate dioxygenase reductase family signature 99 118 1.7E-32 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 PRINTS PR00409 Phthalate dioxygenase reductase family signature 40 54 1.7E-32 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 PRINTS PR00409 Phthalate dioxygenase reductase family signature 64 78 1.7E-32 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 PRINTS PR00409 Phthalate dioxygenase reductase family signature 175 183 1.7E-32 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 PRINTS PR00409 Phthalate dioxygenase reductase family signature 124 133 1.7E-32 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 PANTHER PTHR22924:SF20 8 262 8.0E-61 T 13-09-2016 PMA3_RS26310 b5ec93ce6338bf80fc92cf834267aee7 306 Gene3D G3DSA:2.40.30.10 3 88 3.4E-30 T 13-09-2016 PMA3_RS09825 58b123a8950b9edd19b485d61b01a23f 480 PANTHER PTHR11699 4 475 5.7E-165 T 13-09-2016 PMA3_RS09825 58b123a8950b9edd19b485d61b01a23f 480 Gene3D G3DSA:3.40.309.10 260 437 2.1E-53 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS09825 58b123a8950b9edd19b485d61b01a23f 480 SUPERFAMILY SSF53720 3 476 3.8E-137 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS09825 58b123a8950b9edd19b485d61b01a23f 480 Gene3D G3DSA:3.40.605.10 2 259 5.0E-79 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS09825 58b123a8950b9edd19b485d61b01a23f 480 Pfam PF00171 Aldehyde dehydrogenase family 16 472 4.1E-134 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS29635 9f1f84263d6b806a4ebf2137d6196c29 91 PANTHER PTHR33175 1 90 3.1E-39 T 13-09-2016 PMA3_RS29635 9f1f84263d6b806a4ebf2137d6196c29 91 Gene3D G3DSA:4.10.520.10 1 90 1.6E-34 T 13-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PMA3_RS29635 9f1f84263d6b806a4ebf2137d6196c29 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.0E-33 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS29635 9f1f84263d6b806a4ebf2137d6196c29 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.2E-16 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS29635 9f1f84263d6b806a4ebf2137d6196c29 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.2E-16 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS29635 9f1f84263d6b806a4ebf2137d6196c29 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.2E-16 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS29635 9f1f84263d6b806a4ebf2137d6196c29 91 SMART SM00411 1 90 6.1E-39 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS29635 9f1f84263d6b806a4ebf2137d6196c29 91 SUPERFAMILY SSF47729 1 90 1.47E-31 T 13-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PMA3_RS29635 9f1f84263d6b806a4ebf2137d6196c29 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 13-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 Gene3D G3DSA:3.40.47.10 154 199 2.3E-59 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 Gene3D G3DSA:3.40.47.10 282 399 2.3E-59 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 PANTHER PTHR18919 1 400 2.3E-245 T 13-09-2016 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 13-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 400 2.2E-222 T 13-09-2016 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 SUPERFAMILY SSF53901 278 399 2.47E-43 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 9.7E-134 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 13-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 2.6E-42 T 13-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 Pfam PF00108 Thiolase, N-terminal domain 4 266 1.1E-76 T 13-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 PIRSF PIRSF000429 1 400 1.5E-133 T 13-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 Gene3D G3DSA:3.40.47.10 3 125 4.7E-70 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 Gene3D G3DSA:3.40.47.10 200 281 4.7E-70 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 PANTHER PTHR18919:SF91 1 400 2.3E-245 T 13-09-2016 PMA3_RS05400 43081e95b2231d861c24dba7bf4c073d 400 SUPERFAMILY SSF53901 3 275 1.22E-84 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS16470 5fdab20843f77adffa63e67a02026852 319 PANTHER PTHR21240 20 317 2.4E-63 T 13-09-2016 PMA3_RS16470 5fdab20843f77adffa63e67a02026852 319 SUPERFAMILY SSF51556 20 314 2.25E-49 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS16470 5fdab20843f77adffa63e67a02026852 319 Pfam PF04909 Amidohydrolase 22 314 1.8E-31 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS16470 5fdab20843f77adffa63e67a02026852 319 Gene3D G3DSA:3.20.20.140 19 317 1.1E-59 T 13-09-2016 PMA3_RS16470 5fdab20843f77adffa63e67a02026852 319 PANTHER PTHR21240:SF9 20 317 2.4E-63 T 13-09-2016 PMA3_RS03855 9bfd3ec5f9f6caa539dba0158b618852 157 Gene3D G3DSA:2.60.120.10 35 118 2.9E-5 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS03855 9bfd3ec5f9f6caa539dba0158b618852 157 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 7 138 3.2E-45 T 13-09-2016 IPR027565 Cupin fold metalloprotein, WbuC family PMA3_RS03855 9bfd3ec5f9f6caa539dba0158b618852 157 SUPERFAMILY SSF51182 30 127 2.85E-11 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS29065 3f4d9390aa8df29ac3f415e09ce88964 150 SUPERFAMILY SSF88697 1 148 7.71E-59 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS29065 3f4d9390aa8df29ac3f415e09ce88964 150 Pfam PF01878 EVE domain 2 147 1.8E-53 T 13-09-2016 IPR002740 EVE domain PMA3_RS29065 3f4d9390aa8df29ac3f415e09ce88964 150 Gene3D G3DSA:3.10.590.10 1 147 1.2E-29 T 13-09-2016 IPR002740 EVE domain PMA3_RS29065 3f4d9390aa8df29ac3f415e09ce88964 150 PANTHER PTHR14087 1 148 2.1E-69 T 13-09-2016 PMA3_RS28440 2cd8d053546ff54d9f8df7bd8b9b29b5 145 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 137 4.3E-43 T 13-09-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PMA3_RS28440 2cd8d053546ff54d9f8df7bd8b9b29b5 145 PANTHER PTHR33317 6 144 6.1E-42 T 13-09-2016 PMA3_RS28440 2cd8d053546ff54d9f8df7bd8b9b29b5 145 SUPERFAMILY SSF53098 4 138 1.52E-40 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS28440 2cd8d053546ff54d9f8df7bd8b9b29b5 145 Pfam PF03652 Holliday junction resolvase 6 138 2.3E-41 T 13-09-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PMA3_RS28440 2cd8d053546ff54d9f8df7bd8b9b29b5 145 SMART SM00732 4 104 3.3E-40 T 13-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PMA3_RS28440 2cd8d053546ff54d9f8df7bd8b9b29b5 145 Gene3D G3DSA:3.30.420.140 5 140 2.1E-45 T 13-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PMA3_RS28440 2cd8d053546ff54d9f8df7bd8b9b29b5 145 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 140 24.386 T 13-09-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PMA3_RS08660 ad8e35bf0265e9a142cc5b736ab7f12a 896 SMART SM00490 752 832 1.0E-20 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS08660 ad8e35bf0265e9a142cc5b736ab7f12a 896 SUPERFAMILY SSF52540 637 887 1.35E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08660 ad8e35bf0265e9a142cc5b736ab7f12a 896 Pfam PF00176 SNF2 family N-terminal domain 439 708 1.3E-63 T 13-09-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 PMA3_RS08660 ad8e35bf0265e9a142cc5b736ab7f12a 896 SMART SM00487 421 605 1.2E-30 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS08660 ad8e35bf0265e9a142cc5b736ab7f12a 896 PANTHER PTHR10799 418 874 3.7E-180 T 13-09-2016 PMA3_RS08660 ad8e35bf0265e9a142cc5b736ab7f12a 896 Gene3D G3DSA:3.40.50.300 720 860 1.5E-21 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08660 ad8e35bf0265e9a142cc5b736ab7f12a 896 SUPERFAMILY SSF52540 408 636 3.95E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08660 ad8e35bf0265e9a142cc5b736ab7f12a 896 Gene3D G3DSA:3.40.50.300 418 594 2.0E-29 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08660 ad8e35bf0265e9a142cc5b736ab7f12a 896 Pfam PF00271 Helicase conserved C-terminal domain 723 832 6.4E-17 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS04535 a39c115f05a7464c50e9559e167f5ea9 541 PANTHER PTHR30504:SF3 1 540 4.6E-297 T 13-09-2016 PMA3_RS04535 a39c115f05a7464c50e9559e167f5ea9 541 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 540 58.569 T 13-09-2016 IPR023724 Glucan biosynthesis, MdoD UniPathway: UPA00637 PMA3_RS04535 a39c115f05a7464c50e9559e167f5ea9 541 SUPERFAMILY SSF81296 418 533 3.64E-29 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS04535 a39c115f05a7464c50e9559e167f5ea9 541 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 43 530 1.2E-180 T 13-09-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 PMA3_RS04535 a39c115f05a7464c50e9559e167f5ea9 541 Gene3D G3DSA:2.60.40.10 419 540 2.2E-35 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS04535 a39c115f05a7464c50e9559e167f5ea9 541 SUPERFAMILY SSF74650 43 417 6.91E-147 T 13-09-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PMA3_RS04535 a39c115f05a7464c50e9559e167f5ea9 541 Gene3D G3DSA:2.70.98.10 42 418 1.1E-155 T 13-09-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PMA3_RS04535 a39c115f05a7464c50e9559e167f5ea9 541 PANTHER PTHR30504 1 540 4.6E-297 T 13-09-2016 PMA3_RS04535 a39c115f05a7464c50e9559e167f5ea9 541 PIRSF PIRSF006281 1 534 2.1E-199 T 13-09-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 PMA3_RS14535 3b37033b3f2beb7b12e9edbf7cd2a262 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 339 3.5E-62 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS14535 3b37033b3f2beb7b12e9edbf7cd2a262 363 PANTHER PTHR22893:SF7 1 345 9.2E-130 T 13-09-2016 PMA3_RS14535 3b37033b3f2beb7b12e9edbf7cd2a262 363 Gene3D G3DSA:3.20.20.70 1 345 9.4E-110 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS14535 3b37033b3f2beb7b12e9edbf7cd2a262 363 SUPERFAMILY SSF51395 1 351 5.13E-105 T 13-09-2016 PMA3_RS14535 3b37033b3f2beb7b12e9edbf7cd2a262 363 PANTHER PTHR22893 1 345 9.2E-130 T 13-09-2016 PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 SMART SM00387 332 437 3.5E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 SUPERFAMILY SSF55874 300 436 2.36E-27 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 436 8.8E-14 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 SUPERFAMILY SSF47384 212 282 2.75E-5 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 PANTHER PTHR24423:SF543 30 61 4.6E-70 T 13-09-2016 PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 PANTHER PTHR24423:SF543 171 437 4.6E-70 T 13-09-2016 PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 Gene3D G3DSA:3.30.565.10 312 436 1.7E-25 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 6.0E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 6.0E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 6.0E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 PANTHER PTHR24423 30 61 4.6E-70 T 13-09-2016 PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 PANTHER PTHR24423 171 437 4.6E-70 T 13-09-2016 PMA3_RS19950 59941b9d981389da33bb6c5723af7e6a 437 Pfam PF00672 HAMP domain 158 222 1.6E-6 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS20485 447c4b42e41069c50558d9575768a8dc 400 PANTHER PTHR30349:SF21 1 386 1.7E-132 T 13-09-2016 PMA3_RS20485 447c4b42e41069c50558d9575768a8dc 400 Pfam PF04303 PrpF protein 10 396 2.7E-174 T 13-09-2016 IPR007400 PrpF protein PMA3_RS20485 447c4b42e41069c50558d9575768a8dc 400 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 9 400 6.5E-228 T 13-09-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 PMA3_RS20485 447c4b42e41069c50558d9575768a8dc 400 SUPERFAMILY SSF54506 8 186 2.2E-70 T 13-09-2016 PMA3_RS20485 447c4b42e41069c50558d9575768a8dc 400 PANTHER PTHR30349 1 386 1.7E-132 T 13-09-2016 PMA3_RS20485 447c4b42e41069c50558d9575768a8dc 400 Gene3D G3DSA:3.10.310.10 201 379 9.6E-79 T 13-09-2016 PMA3_RS20485 447c4b42e41069c50558d9575768a8dc 400 SUPERFAMILY SSF54506 194 398 8.63E-76 T 13-09-2016 PMA3_RS20485 447c4b42e41069c50558d9575768a8dc 400 Gene3D G3DSA:3.10.310.10 8 200 3.3E-90 T 13-09-2016 PMA3_RS17655 2500a0e84ae3be77c893851074db4b8d 218 PANTHER PTHR12151 51 157 9.6E-29 T 13-09-2016 IPR003782 Copper chaperone SCO1/SenC PMA3_RS17655 2500a0e84ae3be77c893851074db4b8d 218 Pfam PF02630 SCO1/SenC 50 153 6.2E-16 T 13-09-2016 IPR003782 Copper chaperone SCO1/SenC PMA3_RS17655 2500a0e84ae3be77c893851074db4b8d 218 SUPERFAMILY SSF52833 47 199 4.66E-32 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS17655 2500a0e84ae3be77c893851074db4b8d 218 Gene3D G3DSA:3.40.30.10 10 200 1.3E-31 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS20625 3df7cdf0c256992bbebd308b57b6d26a 184 PANTHER PTHR30349 32 182 6.3E-21 T 13-09-2016 PMA3_RS20625 3df7cdf0c256992bbebd308b57b6d26a 184 Gene3D G3DSA:1.10.443.10 11 176 1.6E-26 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS20625 3df7cdf0c256992bbebd308b57b6d26a 184 PANTHER PTHR30349:SF34 32 182 6.3E-21 T 13-09-2016 PMA3_RS20625 3df7cdf0c256992bbebd308b57b6d26a 184 Pfam PF00589 Phage integrase family 34 168 2.7E-18 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS20625 3df7cdf0c256992bbebd308b57b6d26a 184 SUPERFAMILY SSF56349 9 179 2.3E-27 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS18830 74a04f6d46299971e95adb26e6f45be1 333 SUPERFAMILY SSF53850 43 260 1.15E-31 T 13-09-2016 PMA3_RS18830 74a04f6d46299971e95adb26e6f45be1 333 PANTHER PTHR31528:SF4 1 327 2.6E-117 T 13-09-2016 PMA3_RS18830 74a04f6d46299971e95adb26e6f45be1 333 PANTHER PTHR31528 1 327 2.6E-117 T 13-09-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 PMA3_RS18830 74a04f6d46299971e95adb26e6f45be1 333 Gene3D G3DSA:3.40.190.10 116 239 9.6E-17 T 13-09-2016 PMA3_RS18830 74a04f6d46299971e95adb26e6f45be1 333 Pfam PF09084 NMT1/THI5 like 43 254 5.5E-34 T 13-09-2016 IPR015168 SsuA/THI5-like PMA3_RS16340 754ebe92cbe7ceaa24340df254313a25 171 PANTHER PTHR30154 14 164 5.6E-50 T 13-09-2016 PMA3_RS16340 754ebe92cbe7ceaa24340df254313a25 171 PANTHER PTHR30154:SF27 14 164 5.6E-50 T 13-09-2016 PMA3_RS27000 c7cf93139e3a13bae6f8dd99796b39d3 421 PANTHER PTHR30489:SF2 228 420 6.1E-112 T 13-09-2016 PMA3_RS27000 c7cf93139e3a13bae6f8dd99796b39d3 421 PANTHER PTHR30489:SF2 1 204 6.1E-112 T 13-09-2016 PMA3_RS27000 c7cf93139e3a13bae6f8dd99796b39d3 421 Pfam PF02687 FtsX-like permease family 294 412 2.1E-18 T 13-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PMA3_RS27000 c7cf93139e3a13bae6f8dd99796b39d3 421 Pfam PF12704 MacB-like periplasmic core domain 19 203 1.2E-12 T 13-09-2016 IPR025857 MacB-like periplasmic core domain PMA3_RS27000 c7cf93139e3a13bae6f8dd99796b39d3 421 PANTHER PTHR30489 228 420 6.1E-112 T 13-09-2016 PMA3_RS27000 c7cf93139e3a13bae6f8dd99796b39d3 421 PANTHER PTHR30489 1 204 6.1E-112 T 13-09-2016 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 PANTHER PTHR11458 8 337 5.0E-182 T 13-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.6E-56 T 13-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.6E-56 T 13-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.6E-56 T 13-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.6E-56 T 13-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.6E-56 T 13-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.6E-56 T 13-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 SMART SM01004 10 333 2.3E-235 T 13-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 PIRSF PIRSF001415 3 336 2.8E-146 T 13-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 13-09-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 Gene3D G3DSA:3.20.20.70 8 336 2.0E-148 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 SUPERFAMILY SSF51569 7 335 4.69E-140 T 13-09-2016 PMA3_RS29150 3bebc41c039c0e7b10f5dadf7ff9d099 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 331 3.8E-135 T 13-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS26855 7bb40e15980edff46934145496276ac9 100 PANTHER PTHR35601:SF2 1 95 4.3E-56 T 13-09-2016 PMA3_RS26855 7bb40e15980edff46934145496276ac9 100 SUPERFAMILY SSF143011 1 82 7.59E-22 T 13-09-2016 PMA3_RS26855 7bb40e15980edff46934145496276ac9 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 81 3.4E-10 T 13-09-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PMA3_RS26855 7bb40e15980edff46934145496276ac9 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 82 1.0E-12 T 13-09-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PMA3_RS26855 7bb40e15980edff46934145496276ac9 100 PANTHER PTHR35601 1 95 4.3E-56 T 13-09-2016 PMA3_RS07800 81ea6e43e8ce8037fbd382b8eb19bf60 452 Pfam PF00860 Permease family 22 401 1.1E-101 T 13-09-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS07800 81ea6e43e8ce8037fbd382b8eb19bf60 452 TIGRFAM TIGR03173 pbuX: xanthine permease 26 434 2.2E-157 T 13-09-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 PMA3_RS07800 81ea6e43e8ce8037fbd382b8eb19bf60 452 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 349 369 - T 13-09-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS07800 81ea6e43e8ce8037fbd382b8eb19bf60 452 PANTHER PTHR11119 16 435 9.2E-111 T 13-09-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS07800 81ea6e43e8ce8037fbd382b8eb19bf60 452 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 432 2.8E-112 T 13-09-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 Gene3D G3DSA:3.40.50.10490 102 294 2.4E-75 T 13-09-2016 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 528 40.492 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 501 514 6.4E-52 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 342 363 6.4E-52 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 469 487 6.4E-52 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 153 172 6.4E-52 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 487 501 6.4E-52 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 265 283 6.4E-52 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 Gene3D G3DSA:1.10.1390.10 511 551 8.1E-17 T 13-09-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 Gene3D G3DSA:3.40.50.10490 297 510 2.2E-131 T 13-09-2016 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 Gene3D G3DSA:3.40.50.10490 13 101 2.2E-131 T 13-09-2016 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 SUPERFAMILY SSF53697 9 551 4.62E-208 T 13-09-2016 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 269 282 - T 13-09-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 PANTHER PTHR11469 2 549 6.2E-277 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 501 518 - T 13-09-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS03450 ce5e1b938eba1ab1703153096a0e4688 554 Pfam PF00342 Phosphoglucose isomerase 55 545 5.4E-193 T 13-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS17260 b24fbd10f48b3f52ea519d152340d97d 304 Pfam PF03466 LysR substrate binding domain 93 294 1.6E-24 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS17260 b24fbd10f48b3f52ea519d152340d97d 304 PANTHER PTHR30126:SF16 7 294 2.7E-87 T 13-09-2016 PMA3_RS17260 b24fbd10f48b3f52ea519d152340d97d 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.7E-15 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS17260 b24fbd10f48b3f52ea519d152340d97d 304 Gene3D G3DSA:1.10.10.10 6 85 1.1E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17260 b24fbd10f48b3f52ea519d152340d97d 304 SUPERFAMILY SSF46785 8 86 1.39E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17260 b24fbd10f48b3f52ea519d152340d97d 304 SUPERFAMILY SSF53850 95 299 9.17E-26 T 13-09-2016 PMA3_RS17260 b24fbd10f48b3f52ea519d152340d97d 304 PANTHER PTHR30126 7 294 2.7E-87 T 13-09-2016 PMA3_RS17260 b24fbd10f48b3f52ea519d152340d97d 304 Gene3D G3DSA:3.40.190.10 95 206 2.0E-15 T 13-09-2016 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 SMART SM00448 7 120 6.9E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 SUPERFAMILY SSF46894 137 208 1.22E-20 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 PANTHER PTHR26402 7 208 4.3E-66 T 13-09-2016 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 Pfam PF00072 Response regulator receiver domain 9 121 1.9E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 2.0E-16 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 Gene3D G3DSA:1.10.10.10 151 208 6.9E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 PANTHER PTHR26402:SF151 7 208 4.3E-66 T 13-09-2016 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 Gene3D G3DSA:3.40.50.2300 6 150 4.9E-38 T 13-09-2016 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 SMART SM00421 145 202 4.0E-17 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 SUPERFAMILY SSF52172 6 137 4.7E-33 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.8E-12 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.8E-12 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11430 23a6a058241ea3610e1287ab67c9cc7a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.8E-12 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS28845 84ce3904ac80e04dd0e46b1c1959192f 193 SUPERFAMILY SSF52833 35 188 5.93E-15 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS28845 84ce3904ac80e04dd0e46b1c1959192f 193 Gene3D G3DSA:3.40.30.10 9 102 1.6E-5 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 PANTHER PTHR21266:SF30 1 377 1.0E-148 T 13-09-2016 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 196 382 5.5E-15 T 13-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 SUPERFAMILY SSF55961 164 445 6.2E-68 T 13-09-2016 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 Gene3D G3DSA:3.90.380.10 151 445 2.5E-89 T 13-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 PANTHER PTHR21266 1 377 1.0E-148 T 13-09-2016 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 Pfam PF00355 Rieske [2Fe-2S] domain 45 129 4.3E-21 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 1.9E-45 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 148 174 1.9E-45 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 60 75 1.9E-45 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 1.9E-45 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 30 55 1.9E-45 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 81 101 1.9E-45 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 88 111 - T 13-09-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 TIGRFAM TIGR03229 benzo_1_2_benA: benzoate 1,2-dioxygenase, large subunit 8 439 1.4E-268 T 13-09-2016 IPR017639 Benzoate 1,2-dioxygenase, large subunit PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 SUPERFAMILY SSF50022 8 163 1.57E-44 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10985 c8dfc89f2e039854f3f18c9ff505e8b2 454 Gene3D G3DSA:2.102.10.10 45 150 3.6E-22 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS04955 07311f8aa82cfc9fc1731e9fb71d48f3 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 2.8E-70 T 13-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04955 07311f8aa82cfc9fc1731e9fb71d48f3 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 13-09-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04955 07311f8aa82cfc9fc1731e9fb71d48f3 157 Pfam PF02542 YgbB family 1 154 7.2E-66 T 13-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04955 07311f8aa82cfc9fc1731e9fb71d48f3 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.174 T 13-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04955 07311f8aa82cfc9fc1731e9fb71d48f3 157 Gene3D G3DSA:3.30.1330.50 1 156 1.5E-70 T 13-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS04955 07311f8aa82cfc9fc1731e9fb71d48f3 157 PANTHER PTHR32125 1 157 9.0E-57 T 13-09-2016 PMA3_RS04955 07311f8aa82cfc9fc1731e9fb71d48f3 157 SUPERFAMILY SSF69765 1 156 2.09E-65 T 13-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PMA3_RS27855 aec2a9ed8bea8b43536a2d168be384c7 323 Pfam PF04773 FecR protein 116 205 2.3E-19 T 13-09-2016 IPR006860 FecR protein PMA3_RS27855 aec2a9ed8bea8b43536a2d168be384c7 323 PANTHER PTHR30273 7 320 2.5E-101 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS27855 aec2a9ed8bea8b43536a2d168be384c7 323 Pfam PF16220 Domain of unknown function (DUF4880) 15 52 1.5E-8 T 13-09-2016 IPR032623 FecR, N-terminal PMA3_RS27855 aec2a9ed8bea8b43536a2d168be384c7 323 PANTHER PTHR30273:SF3 7 320 2.5E-101 T 13-09-2016 PMA3_RS27855 aec2a9ed8bea8b43536a2d168be384c7 323 PIRSF PIRSF018266 5 319 1.5E-84 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS12010 7588bd2bc8e5a1c4dafecb8cec390202 295 Pfam PF04261 Dyp-type peroxidase family 43 282 5.8E-38 T 13-09-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- PMA3_RS12010 7588bd2bc8e5a1c4dafecb8cec390202 295 SUPERFAMILY SSF54909 1 283 2.68E-71 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS12010 7588bd2bc8e5a1c4dafecb8cec390202 295 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 283 1.0E-57 T 13-09-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- PMA3_RS12010 7588bd2bc8e5a1c4dafecb8cec390202 295 PANTHER PTHR30521 45 293 1.8E-51 T 13-09-2016 PMA3_RS12010 7588bd2bc8e5a1c4dafecb8cec390202 295 PANTHER PTHR30521:SF0 45 293 1.8E-51 T 13-09-2016 PMA3_RS18785 4ee33a6a78edf4b1282c7bcd9ec2635c 301 SUPERFAMILY SSF161098 96 280 7.09E-32 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS18785 4ee33a6a78edf4b1282c7bcd9ec2635c 301 PANTHER PTHR30151:SF8 55 301 8.7E-75 T 13-09-2016 PMA3_RS18785 4ee33a6a78edf4b1282c7bcd9ec2635c 301 Gene3D G3DSA:1.10.3720.10 95 290 9.2E-22 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS18785 4ee33a6a78edf4b1282c7bcd9ec2635c 301 PANTHER PTHR30151 55 301 8.7E-75 T 13-09-2016 PMA3_RS18785 4ee33a6a78edf4b1282c7bcd9ec2635c 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 290 3.8E-25 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS11250 fcd9552c39abdedd7c3b0fdbcf9823dd 129 PANTHER PTHR33570:SF2 3 128 1.3E-56 T 13-09-2016 PMA3_RS11250 fcd9552c39abdedd7c3b0fdbcf9823dd 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 1.4E-22 T 13-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS11250 fcd9552c39abdedd7c3b0fdbcf9823dd 129 Gene3D G3DSA:1.20.1290.10 3 126 7.8E-34 T 13-09-2016 IPR029032 AhpD-like PMA3_RS11250 fcd9552c39abdedd7c3b0fdbcf9823dd 129 PANTHER PTHR33570 3 128 1.3E-56 T 13-09-2016 PMA3_RS11250 fcd9552c39abdedd7c3b0fdbcf9823dd 129 SUPERFAMILY SSF69118 4 122 1.11E-36 T 13-09-2016 IPR029032 AhpD-like PMA3_RS22705 d9153c40b209b164053be6b46d4b25ea 248 Pfam PF06414 Zeta toxin 29 208 3.6E-41 T 13-09-2016 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 PMA3_RS22705 d9153c40b209b164053be6b46d4b25ea 248 SUPERFAMILY SSF52540 38 203 2.91E-14 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22705 d9153c40b209b164053be6b46d4b25ea 248 Gene3D G3DSA:3.40.50.300 34 188 8.8E-15 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20530 165c7d5ac9d93fee132532696ac89513 205 Gene3D G3DSA:3.40.50.1000 130 175 5.8E-6 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20530 165c7d5ac9d93fee132532696ac89513 205 SUPERFAMILY SSF56784 2 186 7.54E-44 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20530 165c7d5ac9d93fee132532696ac89513 205 Pfam PF12710 haloacid dehalogenase-like hydrolase 67 160 3.1E-9 T 13-09-2016 PMA3_RS20530 165c7d5ac9d93fee132532696ac89513 205 Gene3D G3DSA:3.90.1470.10 13 128 7.4E-46 T 13-09-2016 PMA3_RS20530 165c7d5ac9d93fee132532696ac89513 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 2 203 6.3E-116 T 13-09-2016 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 PMA3_RS07995 adc005250f1bcdf1127abb5018afe561 384 ProSitePatterns PS00336 Beta-lactamase class-C active site. 82 89 - T 13-09-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 PMA3_RS07995 adc005250f1bcdf1127abb5018afe561 384 Pfam PF00144 Beta-lactamase 35 381 3.6E-73 T 13-09-2016 IPR001466 Beta-lactamase-related PMA3_RS07995 adc005250f1bcdf1127abb5018afe561 384 PANTHER PTHR22935 28 384 6.4E-61 T 13-09-2016 PMA3_RS07995 adc005250f1bcdf1127abb5018afe561 384 SUPERFAMILY SSF56601 27 382 1.76E-96 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS07995 adc005250f1bcdf1127abb5018afe561 384 Gene3D G3DSA:3.40.710.10 28 382 1.6E-83 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS07995 adc005250f1bcdf1127abb5018afe561 384 PANTHER PTHR22935:SF64 28 384 6.4E-61 T 13-09-2016 PMA3_RS10550 661cfa4859a5366c66ee328cd9460a66 451 PANTHER PTHR35566:SF3 1 451 3.9E-204 T 13-09-2016 PMA3_RS10550 661cfa4859a5366c66ee328cd9460a66 451 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 448 7.0E-137 T 13-09-2016 IPR010263 Type VI secretion protein, VC_A0114 PMA3_RS10550 661cfa4859a5366c66ee328cd9460a66 451 PANTHER PTHR35566 1 451 3.9E-204 T 13-09-2016 PMA3_RS10550 661cfa4859a5366c66ee328cd9460a66 451 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 449 2.4E-130 T 13-09-2016 IPR010263 Type VI secretion protein, VC_A0114 PMA3_RS24460 ea7b3844b6b5b8fa39845c2be037bc5d 215 SUPERFAMILY SSF52833 12 90 1.12E-15 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS24460 ea7b3844b6b5b8fa39845c2be037bc5d 215 PANTHER PTHR11260:SF322 12 112 1.8E-32 T 13-09-2016 PMA3_RS24460 ea7b3844b6b5b8fa39845c2be037bc5d 215 Gene3D G3DSA:1.20.1050.10 102 208 1.4E-37 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS24460 ea7b3844b6b5b8fa39845c2be037bc5d 215 PANTHER PTHR11260 12 112 1.8E-32 T 13-09-2016 PMA3_RS24460 ea7b3844b6b5b8fa39845c2be037bc5d 215 Gene3D G3DSA:3.40.30.10 2 101 1.5E-21 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS24460 ea7b3844b6b5b8fa39845c2be037bc5d 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 16 82 3.9E-11 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS24460 ea7b3844b6b5b8fa39845c2be037bc5d 215 Pfam PF14834 Glutathione S-transferase, C-terminal domain 93 205 3.0E-39 T 13-09-2016 PMA3_RS24460 ea7b3844b6b5b8fa39845c2be037bc5d 215 SUPERFAMILY SSF47616 87 206 1.42E-11 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS18670 dfbfcd0aa7512b1da9b7fbba846bd4b9 249 PANTHER PTHR21294:SF8 1 249 4.0E-151 T 13-09-2016 PMA3_RS18670 dfbfcd0aa7512b1da9b7fbba846bd4b9 249 Pfam PF01012 Electron transfer flavoprotein domain 29 205 9.3E-46 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS18670 dfbfcd0aa7512b1da9b7fbba846bd4b9 249 PIRSF PIRSF000090 1 249 6.5E-84 T 13-09-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PMA3_RS18670 dfbfcd0aa7512b1da9b7fbba846bd4b9 249 PANTHER PTHR21294 1 249 4.0E-151 T 13-09-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PMA3_RS18670 dfbfcd0aa7512b1da9b7fbba846bd4b9 249 Gene3D G3DSA:3.40.50.620 1 247 4.1E-102 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS18670 dfbfcd0aa7512b1da9b7fbba846bd4b9 249 SMART SM00893 23 211 3.4E-67 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS18670 dfbfcd0aa7512b1da9b7fbba846bd4b9 249 SUPERFAMILY SSF52402 1 242 6.56E-85 T 13-09-2016 PMA3_RS18670 dfbfcd0aa7512b1da9b7fbba846bd4b9 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 13-09-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 PMA3_RS12825 d83bba1e40f0bba79a2e091fe01fa633 161 Gene3D G3DSA:4.10.1020.10 65 132 6.2E-32 T 13-09-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain PMA3_RS12825 d83bba1e40f0bba79a2e091fe01fa633 161 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 40 145 1.4E-44 T 13-09-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PMA3_RS12825 d83bba1e40f0bba79a2e091fe01fa633 161 PANTHER PTHR38604:SF1 1 152 1.4E-63 T 13-09-2016 PMA3_RS12825 d83bba1e40f0bba79a2e091fe01fa633 161 PANTHER PTHR38604 1 152 1.4E-63 T 13-09-2016 PMA3_RS12825 d83bba1e40f0bba79a2e091fe01fa633 161 PIRSF PIRSF006105 3 161 5.4E-53 T 13-09-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PMA3_RS12825 d83bba1e40f0bba79a2e091fe01fa633 161 SUPERFAMILY SSF48695 43 152 3.35E-41 T 13-09-2016 IPR011031 Multihaem cytochrome PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 PIRSF PIRSF038971 3 381 1.4E-152 T 13-09-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 Gene3D G3DSA:3.20.20.140 289 359 1.2E-8 T 13-09-2016 PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 SUPERFAMILY SSF51556 54 348 1.79E-18 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 PANTHER PTHR11271:SF43 6 147 1.8E-147 T 13-09-2016 PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 PANTHER PTHR11271 6 147 1.8E-147 T 13-09-2016 PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 PANTHER PTHR11271 165 381 1.8E-147 T 13-09-2016 PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 Pfam PF07969 Amidohydrolase family 187 359 2.7E-10 T 13-09-2016 IPR013108 Amidohydrolase 3 PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 PANTHER PTHR11271:SF43 165 381 1.8E-147 T 13-09-2016 PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 SUPERFAMILY SSF51338 348 360 1.13E-10 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 SUPERFAMILY SSF51338 2 54 1.13E-10 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 Gene3D G3DSA:2.30.40.10 6 95 1.5E-10 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS21420 22e6bc8b28863f9d9ac0c367fbf17d64 381 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 381 4.2E-154 T 13-09-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 PMA3_RS12590 99e7356e2a472ae6ff895b7c69bfc499 162 Gene3D G3DSA:3.10.20.30 10 83 7.1E-26 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS12590 99e7356e2a472ae6ff895b7c69bfc499 162 Gene3D G3DSA:1.10.150.120 84 160 7.5E-32 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS12590 99e7356e2a472ae6ff895b7c69bfc499 162 SUPERFAMILY SSF54292 5 97 2.1E-23 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS12590 99e7356e2a472ae6ff895b7c69bfc499 162 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 48 56 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS12590 99e7356e2a472ae6ff895b7c69bfc499 162 PANTHER PTHR11908 8 144 3.0E-39 T 13-09-2016 PMA3_RS12590 99e7356e2a472ae6ff895b7c69bfc499 162 SUPERFAMILY SSF47741 93 160 1.83E-29 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS12590 99e7356e2a472ae6ff895b7c69bfc499 162 Pfam PF01799 [2Fe-2S] binding domain 82 154 1.9E-27 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS12590 99e7356e2a472ae6ff895b7c69bfc499 162 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 62 2.2E-6 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS29160 46dc58def53737b5f67821130528707a 411 PANTHER PTHR21624 2 363 7.7E-129 T 13-09-2016 PMA3_RS29160 46dc58def53737b5f67821130528707a 411 Pfam PF04116 Fatty acid hydroxylase superfamily 80 213 7.2E-29 T 13-09-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PMA3_RS13615 6a27511807123d96ca6d91ad2724b597 292 Pfam PF12833 Helix-turn-helix domain 210 285 4.3E-19 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS13615 6a27511807123d96ca6d91ad2724b597 292 PANTHER PTHR11019 25 291 1.9E-66 T 13-09-2016 PMA3_RS13615 6a27511807123d96ca6d91ad2724b597 292 SMART SM00342 204 287 9.5E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS13615 6a27511807123d96ca6d91ad2724b597 292 Gene3D G3DSA:1.10.10.60 185 241 2.2E-18 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13615 6a27511807123d96ca6d91ad2724b597 292 SUPERFAMILY SSF46689 188 238 1.48E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13615 6a27511807123d96ca6d91ad2724b597 292 Gene3D G3DSA:1.10.10.60 242 284 1.7E-5 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13615 6a27511807123d96ca6d91ad2724b597 292 PANTHER PTHR11019:SF81 25 291 1.9E-66 T 13-09-2016 PMA3_RS13615 6a27511807123d96ca6d91ad2724b597 292 Pfam PF06719 AraC-type transcriptional regulator N-terminus 25 175 1.1E-40 T 13-09-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal PMA3_RS13615 6a27511807123d96ca6d91ad2724b597 292 SUPERFAMILY SSF46689 240 289 2.85E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS01180 06ed19e3cf579c4a6dda1961b3ed4f7c 171 Pfam PF13511 Domain of unknown function (DUF4124) 9 59 1.5E-14 T 13-09-2016 IPR025392 Domain of unknown function DUF4124 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 SUPERFAMILY SSF53448 268 543 1.31E-49 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 PANTHER PTHR10587:SF94 172 707 5.8E-109 T 13-09-2016 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 Pfam PF00535 Glycosyl transferase family 2 270 439 5.7E-34 T 13-09-2016 IPR001173 Glycosyltransferase 2-like PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 Gene3D G3DSA:3.90.550.10 266 501 6.0E-22 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 SUPERFAMILY SSF141371 689 772 3.34E-7 T 13-09-2016 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 Pfam PF03552 Cellulose synthase 441 562 3.4E-12 T 13-09-2016 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 Pfam PF07238 PilZ domain 687 783 3.2E-10 T 13-09-2016 IPR009875 PilZ domain GO:0035438 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 PANTHER PTHR10587 172 707 5.8E-109 T 13-09-2016 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 140 822 2.0E-277 T 13-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 PRINTS PR01439 Cellulose synthase subunit A signature 356 380 3.0E-59 T 13-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 PRINTS PR01439 Cellulose synthase subunit A signature 220 245 3.0E-59 T 13-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 PRINTS PR01439 Cellulose synthase subunit A signature 192 212 3.0E-59 T 13-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 PRINTS PR01439 Cellulose synthase subunit A signature 275 294 3.0E-59 T 13-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 PRINTS PR01439 Cellulose synthase subunit A signature 660 681 3.0E-59 T 13-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 PRINTS PR01439 Cellulose synthase subunit A signature 546 565 3.0E-59 T 13-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 PRINTS PR01439 Cellulose synthase subunit A signature 586 605 3.0E-59 T 13-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PMA3_RS00355 d98c7a2e14882d5b4be60d020cbed397 863 PRINTS PR01439 Cellulose synthase subunit A signature 517 543 3.0E-59 T 13-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 PMA3_RS25545 69a828bde63462a575cce69da73969ff 102 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 93 1.0E-37 T 13-09-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PMA3_RS25545 69a828bde63462a575cce69da73969ff 102 Gene3D G3DSA:3.30.110.60 1 94 1.1E-24 T 13-09-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PMA3_RS25545 69a828bde63462a575cce69da73969ff 102 PANTHER PTHR40065 1 102 1.5E-21 T 13-09-2016 PMA3_RS25545 69a828bde63462a575cce69da73969ff 102 SUPERFAMILY SSF75471 1 95 1.57E-25 T 13-09-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PMA3_RS25545 69a828bde63462a575cce69da73969ff 102 PANTHER PTHR40065:SF1 1 102 1.5E-21 T 13-09-2016 PMA3_RS25545 69a828bde63462a575cce69da73969ff 102 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 8.4E-16 T 13-09-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PMA3_RS25545 69a828bde63462a575cce69da73969ff 102 SMART SM01103 3 86 1.8E-34 T 13-09-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Gene3D G3DSA:3.40.50.300 387 408 1.5E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Gene3D G3DSA:3.40.50.300 5 88 1.5E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Gene3D G3DSA:3.40.50.300 277 337 1.5E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Pfam PF12344 Ultra-violet resistance protein B 550 591 2.0E-19 T 13-09-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 SUPERFAMILY SSF52540 36 81 1.39E-35 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 SUPERFAMILY SSF52540 457 582 1.39E-35 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 667 43.389 T 13-09-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 665 0.0 T 13-09-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 SUPERFAMILY SSF46600 624 668 1.44E-10 T 13-09-2016 IPR001943 UVR domain GO:0005515 PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Gene3D G3DSA:3.40.50.300 419 577 8.3E-37 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 SMART SM00487 8 424 8.6E-29 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Gene3D G3DSA:3.30.2060.10 159 232 7.8E-9 T 13-09-2016 PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Pfam PF02151 UvrB/uvrC motif 633 666 6.1E-7 T 13-09-2016 IPR001943 UVR domain GO:0005515 PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Pfam PF00271 Helicase conserved C-terminal domain 432 543 2.7E-18 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 SUPERFAMILY SSF52540 3 413 1.1E-137 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 SMART SM00490 458 544 1.9E-18 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 PANTHER PTHR24029 1 669 0.0 T 13-09-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Pfam PF04851 Type III restriction enzyme, res subunit 11 117 7.7E-9 T 13-09-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PMA3_RS08910 7ea2da01ced5624da0a23f4da7648cf8 671 Gene3D G3DSA:4.10.860.10 627 669 1.4E-16 T 13-09-2016 IPR001943 UVR domain GO:0005515 PMA3_RS00650 e51317527e9792aedbafcded19188c64 209 Pfam PF13649 Methyltransferase domain 54 143 1.3E-17 T 13-09-2016 PMA3_RS00650 e51317527e9792aedbafcded19188c64 209 PANTHER PTHR10108:SF779 18 181 1.2E-21 T 13-09-2016 PMA3_RS00650 e51317527e9792aedbafcded19188c64 209 SUPERFAMILY SSF53335 19 204 1.52E-38 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS00650 e51317527e9792aedbafcded19188c64 209 PANTHER PTHR10108 18 181 1.2E-21 T 13-09-2016 PMA3_RS00650 e51317527e9792aedbafcded19188c64 209 Gene3D G3DSA:3.40.50.150 18 202 4.2E-36 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS16885 29a151113381fc63fbee54a0561108fc 428 Gene3D G3DSA:1.20.1250.20 19 189 3.2E-9 T 13-09-2016 PMA3_RS16885 29a151113381fc63fbee54a0561108fc 428 SUPERFAMILY SSF103473 17 414 2.75E-17 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS16885 29a151113381fc63fbee54a0561108fc 428 PANTHER PTHR31187:SF0 10 419 8.8E-63 T 13-09-2016 PMA3_RS16885 29a151113381fc63fbee54a0561108fc 428 PANTHER PTHR31187 10 419 8.8E-63 T 13-09-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 PMA3_RS12765 71b1f237e89662b8b82744d8c520612e 72 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 57 1.1E-6 T 13-09-2016 IPR027379 Cardiolipin synthase N-terminal PMA3_RS21165 37dfe8bb785196ceaa89c7b8b050d564 352 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 21 248 2.3E-67 T 13-09-2016 IPR018642 Protein of unknown function DUF2066 PMA3_RS21860 f63ae1b8799c3f42556508cc96f3cd19 133 PANTHER PTHR36511:SF3 58 131 6.1E-32 T 13-09-2016 PMA3_RS21860 f63ae1b8799c3f42556508cc96f3cd19 133 PANTHER PTHR36511:SF3 2 30 6.1E-32 T 13-09-2016 PMA3_RS21860 f63ae1b8799c3f42556508cc96f3cd19 133 PANTHER PTHR36511 58 131 6.1E-32 T 13-09-2016 PMA3_RS21860 f63ae1b8799c3f42556508cc96f3cd19 133 PANTHER PTHR36511 2 30 6.1E-32 T 13-09-2016 PMA3_RS21860 f63ae1b8799c3f42556508cc96f3cd19 133 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 47 4.2E-14 T 13-09-2016 IPR022453 Zinc finger, MqsA-type PMA3_RS21860 f63ae1b8799c3f42556508cc96f3cd19 133 SUPERFAMILY SSF47413 73 127 1.15E-8 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS21860 f63ae1b8799c3f42556508cc96f3cd19 133 SMART SM00530 73 127 3.6E-7 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS21860 f63ae1b8799c3f42556508cc96f3cd19 133 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 1 131 3.8E-65 T 13-09-2016 IPR032758 Antitoxin MqsA/igA-2 PMA3_RS21860 f63ae1b8799c3f42556508cc96f3cd19 133 Gene3D G3DSA:1.10.260.40 74 126 1.2E-10 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS21860 f63ae1b8799c3f42556508cc96f3cd19 133 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 3 131 5.7E-44 T 13-09-2016 IPR022452 Antitoxin MqsA PMA3_RS13450 0e41da5d9908779853aec4cfb303e275 351 PANTHER PTHR23083 160 348 1.8E-17 T 13-09-2016 PMA3_RS13450 0e41da5d9908779853aec4cfb303e275 351 SUPERFAMILY SSF48452 142 347 6.24E-22 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS13450 0e41da5d9908779853aec4cfb303e275 351 Gene3D G3DSA:1.25.40.10 157 349 2.3E-28 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS13450 0e41da5d9908779853aec4cfb303e275 351 Gene3D G3DSA:1.25.40.10 40 65 2.3E-28 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS13450 0e41da5d9908779853aec4cfb303e275 351 Gene3D G3DSA:1.25.10.10 95 146 4.3E-5 T 13-09-2016 IPR011989 Armadillo-like helical PMA3_RS13450 0e41da5d9908779853aec4cfb303e275 351 SUPERFAMILY SSF48371 64 146 1.29E-6 T 13-09-2016 IPR016024 Armadillo-type fold GO:0005488 PMA3_RS15150 6bb175759ab0c67d5406a7dbdacd9388 139 Gene3D G3DSA:2.60.120.10 40 126 9.1E-20 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS15150 6bb175759ab0c67d5406a7dbdacd9388 139 Pfam PF07883 Cupin domain 55 124 7.4E-14 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS15150 6bb175759ab0c67d5406a7dbdacd9388 139 SUPERFAMILY SSF51182 15 125 2.51E-17 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS15150 6bb175759ab0c67d5406a7dbdacd9388 139 PANTHER PTHR38599 1 138 2.9E-29 T 13-09-2016 PMA3_RS15150 6bb175759ab0c67d5406a7dbdacd9388 139 PANTHER PTHR38599:SF1 1 138 2.9E-29 T 13-09-2016 PMA3_RS12870 5afe23aca752d20f9e9b38731a2a4a63 66 Pfam PF04328 Protein of unknown function (DUF466) 4 66 4.0E-25 T 13-09-2016 IPR007423 Protein of unknown function DUF466 PMA3_RS12870 5afe23aca752d20f9e9b38731a2a4a63 66 PANTHER PTHR38453 1 66 4.1E-27 T 13-09-2016 PMA3_RS12870 5afe23aca752d20f9e9b38731a2a4a63 66 PANTHER PTHR38453:SF2 1 66 4.1E-27 T 13-09-2016 PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 PANTHER PTHR11918 1 442 1.3E-194 T 13-09-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 Pfam PF01938 TRAM domain 378 440 8.2E-18 T 13-09-2016 IPR002792 TRAM domain PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 SUPERFAMILY SSF102114 124 375 3.4E-61 T 13-09-2016 PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 442 72.021 T 13-09-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 PANTHER PTHR11918:SF43 1 442 1.3E-194 T 13-09-2016 PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 438 5.2E-146 T 13-09-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 13-09-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 Gene3D G3DSA:3.80.30.20 146 380 2.8E-77 T 13-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 SMART SM00729 147 367 1.1E-55 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.2E-27 T 13-09-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 Pfam PF04055 Radical SAM superfamily 151 325 6.9E-28 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS02715 46a6bd37131aa7a3e21e9193e564ac0a 442 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 441 1.8E-179 T 13-09-2016 PMA3_RS25090 b0ff298dc61d37de152e7fc9bc28af8a 190 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 11 187 4.7E-49 T 13-09-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PMA3_RS25090 b0ff298dc61d37de152e7fc9bc28af8a 190 PANTHER PTHR37481:SF1 3 190 2.2E-48 T 13-09-2016 PMA3_RS25090 b0ff298dc61d37de152e7fc9bc28af8a 190 PANTHER PTHR37481 3 190 2.2E-48 T 13-09-2016 PMA3_RS25090 b0ff298dc61d37de152e7fc9bc28af8a 190 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 6 190 25.074 T 13-09-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PMA3_RS25090 b0ff298dc61d37de152e7fc9bc28af8a 190 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 188 2.9E-54 T 13-09-2016 IPR010664 Lipopolysaccharide assembly, LptC-related PMA3_RS09025 1ac753e3ac1dc15aa10199bd47ca54d6 255 PANTHER PTHR10108 11 250 4.9E-93 T 13-09-2016 PMA3_RS09025 1ac753e3ac1dc15aa10199bd47ca54d6 255 PANTHER PTHR10108:SF835 11 250 4.9E-93 T 13-09-2016 PMA3_RS09025 1ac753e3ac1dc15aa10199bd47ca54d6 255 Pfam PF08241 Methyltransferase domain 50 146 1.2E-25 T 13-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PMA3_RS09025 1ac753e3ac1dc15aa10199bd47ca54d6 255 SUPERFAMILY SSF53335 12 244 1.66E-46 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS09025 1ac753e3ac1dc15aa10199bd47ca54d6 255 Gene3D G3DSA:3.40.50.150 40 255 1.1E-48 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS18810 d02f2b478f03e6bad9319db5c4e424b0 184 SUPERFAMILY SSF141694 9 94 1.8E-20 T 13-09-2016 PMA3_RS18810 d02f2b478f03e6bad9319db5c4e424b0 184 Pfam PF08922 Domain of unknown function (DUF1905) 10 92 3.0E-20 T 13-09-2016 IPR015018 Protein of unknown function DUF1905 PMA3_RS18810 d02f2b478f03e6bad9319db5c4e424b0 184 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 101 159 1.1E-20 T 13-09-2016 PMA3_RS18810 d02f2b478f03e6bad9319db5c4e424b0 184 Gene3D G3DSA:2.40.30.100 9 93 3.1E-17 T 13-09-2016 PMA3_RS27210 55ba396a80b3f57841ae400a219a1d2a 104 PANTHER PTHR12903 3 98 5.2E-43 T 13-09-2016 PMA3_RS27210 55ba396a80b3f57841ae400a219a1d2a 104 Pfam PF00467 KOW motif 7 31 1.6E-5 T 13-09-2016 IPR005824 KOW PMA3_RS27210 55ba396a80b3f57841ae400a219a1d2a 104 SUPERFAMILY SSF50104 3 99 3.7E-32 T 13-09-2016 IPR008991 Translation protein SH3-like domain PMA3_RS27210 55ba396a80b3f57841ae400a219a1d2a 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 3.2E-24 T 13-09-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27210 55ba396a80b3f57841ae400a219a1d2a 104 SMART SM00739 3 30 8.1E-4 T 13-09-2016 IPR005824 KOW PMA3_RS27210 55ba396a80b3f57841ae400a219a1d2a 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 19.936 T 13-09-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27210 55ba396a80b3f57841ae400a219a1d2a 104 Gene3D G3DSA:2.30.30.30 3 91 2.5E-20 T 13-09-2016 IPR014722 Ribosomal protein L2 domain 2 PMA3_RS27210 55ba396a80b3f57841ae400a219a1d2a 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 13-09-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27210 55ba396a80b3f57841ae400a219a1d2a 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 2.1E-36 T 13-09-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 SUPERFAMILY SSF48179 204 299 1.81E-27 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 419 7.8E-15 T 13-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 419 1.5E-137 T 13-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 PIRSF PIRSF000124 1 438 2.8E-134 T 13-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 PIRSF PIRSF500135 1 438 9.1E-241 T 13-09-2016 IPR028358 GDP-mannose 6-dehydrogenase GO:0042121|GO:0047919 KEGG: 00040+1.1.1.13|KEGG: 00051+1.1.1.132|KEGG: 00520+1.1.1.132|MetaCyc: PWY-6073|MetaCyc: PWY-6082|UniPathway: UPA00286 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 Gene3D G3DSA:3.40.50.720 235 426 1.5E-41 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 Gene3D G3DSA:3.40.50.720 1 194 9.4E-68 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 297 2.2E-29 T 13-09-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 Gene3D G3DSA:1.20.5.100 204 234 1.9E-13 T 13-09-2016 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 PANTHER PTHR11374 1 406 6.5E-234 T 13-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 SUPERFAMILY SSF51735 1 195 2.37E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 PANTHER PTHR11374:SF22 1 406 6.5E-234 T 13-09-2016 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 SMART SM00984 317 425 6.7E-20 T 13-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 SUPERFAMILY SSF52413 308 425 1.11E-24 T 13-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PMA3_RS24605 7cc1d0a02f4d28239991c52bd7338ca6 438 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 189 3.1E-63 T 13-09-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 PMA3_RS03995 46ee6e5546699bdf5f3ba0c34425caa5 364 Gene3D G3DSA:3.40.50.300 5 169 1.7E-24 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03995 46ee6e5546699bdf5f3ba0c34425caa5 364 Pfam PF03969 AFG1-like ATPase 1 360 7.6E-161 T 13-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 PMA3_RS03995 46ee6e5546699bdf5f3ba0c34425caa5 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 364 54.085 T 13-09-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 PMA3_RS03995 46ee6e5546699bdf5f3ba0c34425caa5 364 PANTHER PTHR12169 1 364 4.2E-192 T 13-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 PMA3_RS03995 46ee6e5546699bdf5f3ba0c34425caa5 364 PANTHER PTHR12169:SF11 1 364 4.2E-192 T 13-09-2016 PMA3_RS03995 46ee6e5546699bdf5f3ba0c34425caa5 364 SUPERFAMILY SSF52540 56 185 7.11E-14 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15585 47766db85aff935a0860b887f9c73bed 206 SUPERFAMILY SSF48498 81 204 1.33E-36 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS15585 47766db85aff935a0860b887f9c73bed 206 SUPERFAMILY SSF46689 8 73 4.67E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15585 47766db85aff935a0860b887f9c73bed 206 PANTHER PTHR30055 1 205 9.7E-99 T 13-09-2016 PMA3_RS15585 47766db85aff935a0860b887f9c73bed 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.1E-6 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS15585 47766db85aff935a0860b887f9c73bed 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.1E-6 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS15585 47766db85aff935a0860b887f9c73bed 206 Gene3D G3DSA:1.10.357.10 65 204 2.3E-51 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS15585 47766db85aff935a0860b887f9c73bed 206 PANTHER PTHR30055:SF42 1 205 9.7E-99 T 13-09-2016 PMA3_RS15585 47766db85aff935a0860b887f9c73bed 206 Gene3D G3DSA:1.10.10.60 10 62 1.2E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15585 47766db85aff935a0860b887f9c73bed 206 Pfam PF08362 YcdC-like protein, C-terminal region 65 204 3.7E-52 T 13-09-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PMA3_RS15585 47766db85aff935a0860b887f9c73bed 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.6E-12 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS24930 d553cdb138654f313357d1c84a16eeff 427 SUPERFAMILY SSF51905 25 277 1.04E-36 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS24930 d553cdb138654f313357d1c84a16eeff 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 361 377 1.6E-5 T 13-09-2016 PMA3_RS24930 d553cdb138654f313357d1c84a16eeff 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 28 50 1.6E-5 T 13-09-2016 PMA3_RS24930 d553cdb138654f313357d1c84a16eeff 427 Pfam PF01266 FAD dependent oxidoreductase 28 379 1.2E-47 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS24930 d553cdb138654f313357d1c84a16eeff 427 PANTHER PTHR13847:SF196 6 411 2.1E-82 T 13-09-2016 PMA3_RS24930 d553cdb138654f313357d1c84a16eeff 427 Gene3D G3DSA:3.50.50.60 343 392 2.0E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS24930 d553cdb138654f313357d1c84a16eeff 427 Gene3D G3DSA:3.50.50.60 170 250 2.0E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS24930 d553cdb138654f313357d1c84a16eeff 427 Gene3D G3DSA:3.50.50.60 16 117 2.0E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS24930 d553cdb138654f313357d1c84a16eeff 427 PANTHER PTHR13847 6 411 2.1E-82 T 13-09-2016 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 400 3.2E-17 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PANTHER PTHR30386 155 444 1.1E-124 T 13-09-2016 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PANTHER PTHR30386 19 119 1.1E-124 T 13-09-2016 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 Gene3D G3DSA:2.40.50.100 67 98 4.1E-16 T 13-09-2016 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 Gene3D G3DSA:2.40.50.100 293 328 4.1E-16 T 13-09-2016 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PANTHER PTHR30386:SF3 155 444 1.1E-124 T 13-09-2016 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PANTHER PTHR30386:SF3 19 119 1.1E-124 T 13-09-2016 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 SUPERFAMILY SSF111369 67 124 2.35E-9 T 13-09-2016 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 329 3.7E-67 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 341 365 3.7E-67 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 423 443 3.7E-67 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 365 388 3.7E-67 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 408 423 3.7E-67 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 3.7E-67 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 3.7E-67 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS13760 7c9d5a3c6d8ba5a0eca92478f7c21e9f 444 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 25 444 4.9E-108 T 13-09-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PMA3_RS15710 87f3bbad2730b9550f0ca9cf76faaec2 394 Gene3D G3DSA:3.40.50.2300 61 216 6.8E-7 T 13-09-2016 PMA3_RS15710 87f3bbad2730b9550f0ca9cf76faaec2 394 TIGRFAM TIGR03863 PQQ_ABC_bind: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system 49 392 5.3E-150 T 13-09-2016 IPR022478 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system PMA3_RS15710 87f3bbad2730b9550f0ca9cf76faaec2 394 SUPERFAMILY SSF53822 59 359 7.4E-23 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS15710 87f3bbad2730b9550f0ca9cf76faaec2 394 Pfam PF13458 Periplasmic binding protein 62 359 4.6E-10 T 13-09-2016 IPR028081 Leucine-binding protein domain PMA3_RS07065 c9d0399eba289b82eea31d6b56ce7c1a 218 PANTHER PTHR10259:SF16 1 218 2.3E-101 T 13-09-2016 PMA3_RS07065 c9d0399eba289b82eea31d6b56ce7c1a 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 41.85 T 13-09-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 PMA3_RS07065 c9d0399eba289b82eea31d6b56ce7c1a 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 215 1.6E-90 T 13-09-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 PMA3_RS07065 c9d0399eba289b82eea31d6b56ce7c1a 218 Gene3D G3DSA:3.40.50.150 16 216 1.4E-67 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS07065 c9d0399eba289b82eea31d6b56ce7c1a 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 216 1.8E-82 T 13-09-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 PMA3_RS07065 c9d0399eba289b82eea31d6b56ce7c1a 218 SUPERFAMILY SSF53335 1 215 1.98E-61 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS07065 c9d0399eba289b82eea31d6b56ce7c1a 218 PIRSF PIRSF023956 1 218 5.3E-85 T 13-09-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 PMA3_RS07065 c9d0399eba289b82eea31d6b56ce7c1a 218 PANTHER PTHR10259 1 218 2.3E-101 T 13-09-2016 PMA3_RS18300 8ec12a6a1e7a4d357d41b41395541112 300 Gene3D G3DSA:3.40.190.10 177 265 1.2E-20 T 13-09-2016 PMA3_RS18300 8ec12a6a1e7a4d357d41b41395541112 300 SUPERFAMILY SSF53850 91 292 8.69E-43 T 13-09-2016 PMA3_RS18300 8ec12a6a1e7a4d357d41b41395541112 300 PANTHER PTHR30419:SF2 1 291 4.5E-154 T 13-09-2016 PMA3_RS18300 8ec12a6a1e7a4d357d41b41395541112 300 SUPERFAMILY SSF46785 1 113 9.6E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18300 8ec12a6a1e7a4d357d41b41395541112 300 PANTHER PTHR30419 1 291 4.5E-154 T 13-09-2016 PMA3_RS18300 8ec12a6a1e7a4d357d41b41395541112 300 Pfam PF03466 LysR substrate binding domain 91 291 6.8E-43 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS18300 8ec12a6a1e7a4d357d41b41395541112 300 Gene3D G3DSA:3.40.190.10 92 176 1.3E-23 T 13-09-2016 PMA3_RS18300 8ec12a6a1e7a4d357d41b41395541112 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.4E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18300 8ec12a6a1e7a4d357d41b41395541112 300 Gene3D G3DSA:1.10.10.10 3 87 8.9E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23075 d440e8f31ddc146ce7d32ead18408e6a 448 PANTHER PTHR37944 6 448 2.9E-151 T 13-09-2016 PMA3_RS23075 d440e8f31ddc146ce7d32ead18408e6a 448 Pfam PF04966 Carbohydrate-selective porin, OprB family 76 448 5.3E-107 T 13-09-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PMA3_RS23075 d440e8f31ddc146ce7d32ead18408e6a 448 PANTHER PTHR37944:SF1 6 448 2.9E-151 T 13-09-2016 PMA3_RS16170 e945fcb4c1c2587fac78c8c3e5937909 319 Pfam PF00639 PPIC-type PPIASE domain 169 262 3.6E-21 T 13-09-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PMA3_RS16170 e945fcb4c1c2587fac78c8c3e5937909 319 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 203 223 - T 13-09-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PMA3_RS16170 e945fcb4c1c2587fac78c8c3e5937909 319 PANTHER PTHR10657 137 305 2.1E-23 T 13-09-2016 PMA3_RS16170 e945fcb4c1c2587fac78c8c3e5937909 319 Gene3D G3DSA:3.10.50.40 157 285 4.2E-30 T 13-09-2016 PMA3_RS16170 e945fcb4c1c2587fac78c8c3e5937909 319 PANTHER PTHR10657:SF11 32 43 2.1E-23 T 13-09-2016 PMA3_RS16170 e945fcb4c1c2587fac78c8c3e5937909 319 PANTHER PTHR10657:SF11 137 305 2.1E-23 T 13-09-2016 PMA3_RS16170 e945fcb4c1c2587fac78c8c3e5937909 319 PANTHER PTHR10657 32 43 2.1E-23 T 13-09-2016 PMA3_RS16170 e945fcb4c1c2587fac78c8c3e5937909 319 SUPERFAMILY SSF54534 156 261 1.7E-23 T 13-09-2016 PMA3_RS05245 2cc862b39bc119eb193d4cc3b456546b 824 Gene3D G3DSA:3.20.20.80 445 774 1.9E-25 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS05245 2cc862b39bc119eb193d4cc3b456546b 824 SUPERFAMILY SSF51445 448 777 1.36E-33 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS05245 2cc862b39bc119eb193d4cc3b456546b 824 Pfam PF02449 Beta-galactosidase 566 680 1.0E-4 T 13-09-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PMA3_RS25480 e48d07044de3495d9870103a79e0184b 305 SUPERFAMILY SSF88697 245 303 7.21E-14 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS25480 e48d07044de3495d9870103a79e0184b 305 Gene3D G3DSA:2.30.130.10 244 303 4.2E-25 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS25480 e48d07044de3495d9870103a79e0184b 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 246 302 7.6E-18 T 13-09-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS25480 e48d07044de3495d9870103a79e0184b 305 PANTHER PTHR13767:SF2 2 302 3.4E-130 T 13-09-2016 PMA3_RS25480 e48d07044de3495d9870103a79e0184b 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 2.7E-56 T 13-09-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 PMA3_RS25480 e48d07044de3495d9870103a79e0184b 305 PANTHER PTHR13767 2 302 3.4E-130 T 13-09-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS25480 e48d07044de3495d9870103a79e0184b 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 302 19.196 T 13-09-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS25480 e48d07044de3495d9870103a79e0184b 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 242 1.3E-21 T 13-09-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal PMA3_RS25480 e48d07044de3495d9870103a79e0184b 305 SUPERFAMILY SSF55120 11 222 1.73E-82 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS25480 e48d07044de3495d9870103a79e0184b 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 3.1E-80 T 13-09-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS05990 498695668787322d1cf73a056c17bb0b 307 PANTHER PTHR35271 79 303 9.5E-30 T 13-09-2016 PMA3_RS05990 498695668787322d1cf73a056c17bb0b 307 Gene3D G3DSA:3.40.50.2300 131 249 1.7E-10 T 13-09-2016 PMA3_RS24545 80bcbe1a0ab86ef39629bfcce7bdf2c8 111 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 14 109 5.3E-35 T 13-09-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 PMA3_RS24545 80bcbe1a0ab86ef39629bfcce7bdf2c8 111 PANTHER PTHR36835 2 111 4.4E-37 T 13-09-2016 PMA3_RS24545 80bcbe1a0ab86ef39629bfcce7bdf2c8 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 22 94 4.0E-17 T 13-09-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 PMA3_RS02665 04f00ce5558c5e61bef3f7434773513f 263 SUPERFAMILY SSF51182 18 188 1.6E-18 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS02665 04f00ce5558c5e61bef3f7434773513f 263 PANTHER PTHR11019:SF98 7 259 6.3E-94 T 13-09-2016 PMA3_RS02665 04f00ce5558c5e61bef3f7434773513f 263 Gene3D G3DSA:1.10.10.60 158 216 3.4E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02665 04f00ce5558c5e61bef3f7434773513f 263 SMART SM00342 179 261 2.2E-25 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS02665 04f00ce5558c5e61bef3f7434773513f 263 PANTHER PTHR11019 7 259 6.3E-94 T 13-09-2016 PMA3_RS02665 04f00ce5558c5e61bef3f7434773513f 263 Gene3D G3DSA:2.60.120.10 18 94 1.1E-8 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS02665 04f00ce5558c5e61bef3f7434773513f 263 SUPERFAMILY SSF46689 216 262 1.75E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02665 04f00ce5558c5e61bef3f7434773513f 263 Pfam PF12833 Helix-turn-helix domain 185 262 5.6E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS02665 04f00ce5558c5e61bef3f7434773513f 263 Gene3D G3DSA:1.10.10.60 217 260 3.0E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26085 d77a37c080c915cf70a4839258750dd1 397 PANTHER PTHR22935 29 388 7.5E-63 T 13-09-2016 PMA3_RS26085 d77a37c080c915cf70a4839258750dd1 397 ProSitePatterns PS00336 Beta-lactamase class-C active site. 87 94 - T 13-09-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 PMA3_RS26085 d77a37c080c915cf70a4839258750dd1 397 SUPERFAMILY SSF56601 32 387 2.65E-91 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS26085 d77a37c080c915cf70a4839258750dd1 397 PANTHER PTHR22935:SF64 29 388 7.5E-63 T 13-09-2016 PMA3_RS26085 d77a37c080c915cf70a4839258750dd1 397 Pfam PF00144 Beta-lactamase 38 384 6.0E-68 T 13-09-2016 IPR001466 Beta-lactamase-related PMA3_RS26085 d77a37c080c915cf70a4839258750dd1 397 Gene3D G3DSA:3.40.710.10 35 387 3.4E-74 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS05980 4d949c44d4394deffc8fa00b06b162b2 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 7.5E-94 T 13-09-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PMA3_RS05980 4d949c44d4394deffc8fa00b06b162b2 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 50.913 T 13-09-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PMA3_RS05980 4d949c44d4394deffc8fa00b06b162b2 171 Pfam PF07977 FabA-like domain 28 158 1.5E-52 T 13-09-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PMA3_RS05980 4d949c44d4394deffc8fa00b06b162b2 171 SUPERFAMILY SSF54637 2 168 3.65E-57 T 13-09-2016 IPR029069 HotDog domain PMA3_RS05980 4d949c44d4394deffc8fa00b06b162b2 171 Gene3D G3DSA:3.10.129.10 2 166 1.9E-61 T 13-09-2016 IPR029069 HotDog domain PMA3_RS01070 9ada0f18aba6712b684c5ee25a7946b6 738 PANTHER PTHR30441:SF4 1 738 5.9E-193 T 13-09-2016 PMA3_RS01070 9ada0f18aba6712b684c5ee25a7946b6 738 PANTHER PTHR30441 1 738 5.9E-193 T 13-09-2016 PMA3_RS01070 9ada0f18aba6712b684c5ee25a7946b6 738 Pfam PF05170 AsmA family 1 624 7.1E-116 T 13-09-2016 IPR007844 AsmA PMA3_RS08235 0b70227c629a21976b9ce812870f4cfb 315 PANTHER PTHR33055:SF3 8 312 2.8E-35 T 13-09-2016 PMA3_RS08235 0b70227c629a21976b9ce812870f4cfb 315 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 271 2.7E-19 T 13-09-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PMA3_RS08235 0b70227c629a21976b9ce812870f4cfb 315 Pfam PF01548 Transposase 12 150 4.8E-20 T 13-09-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PMA3_RS08235 0b70227c629a21976b9ce812870f4cfb 315 PANTHER PTHR33055 8 312 2.8E-35 T 13-09-2016 PMA3_RS13330 0b70227c629a21976b9ce812870f4cfb 315 PANTHER PTHR33055:SF3 8 312 2.8E-35 T 13-09-2016 PMA3_RS13330 0b70227c629a21976b9ce812870f4cfb 315 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 271 2.7E-19 T 13-09-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PMA3_RS13330 0b70227c629a21976b9ce812870f4cfb 315 Pfam PF01548 Transposase 12 150 4.8E-20 T 13-09-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PMA3_RS13330 0b70227c629a21976b9ce812870f4cfb 315 PANTHER PTHR33055 8 312 2.8E-35 T 13-09-2016 PMA3_RS22215 0b70227c629a21976b9ce812870f4cfb 315 PANTHER PTHR33055:SF3 8 312 2.8E-35 T 13-09-2016 PMA3_RS22215 0b70227c629a21976b9ce812870f4cfb 315 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 271 2.7E-19 T 13-09-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PMA3_RS22215 0b70227c629a21976b9ce812870f4cfb 315 Pfam PF01548 Transposase 12 150 4.8E-20 T 13-09-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PMA3_RS22215 0b70227c629a21976b9ce812870f4cfb 315 PANTHER PTHR33055 8 312 2.8E-35 T 13-09-2016 PMA3_RS05350 0b70227c629a21976b9ce812870f4cfb 315 PANTHER PTHR33055:SF3 8 312 2.8E-35 T 13-09-2016 PMA3_RS05350 0b70227c629a21976b9ce812870f4cfb 315 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 271 2.7E-19 T 13-09-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PMA3_RS05350 0b70227c629a21976b9ce812870f4cfb 315 Pfam PF01548 Transposase 12 150 4.8E-20 T 13-09-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PMA3_RS05350 0b70227c629a21976b9ce812870f4cfb 315 PANTHER PTHR33055 8 312 2.8E-35 T 13-09-2016 PMA3_RS01475 0b70227c629a21976b9ce812870f4cfb 315 PANTHER PTHR33055:SF3 8 312 2.8E-35 T 13-09-2016 PMA3_RS01475 0b70227c629a21976b9ce812870f4cfb 315 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 271 2.7E-19 T 13-09-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PMA3_RS01475 0b70227c629a21976b9ce812870f4cfb 315 Pfam PF01548 Transposase 12 150 4.8E-20 T 13-09-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PMA3_RS01475 0b70227c629a21976b9ce812870f4cfb 315 PANTHER PTHR33055 8 312 2.8E-35 T 13-09-2016 PMA3_RS20720 d6ffef1112aa3d33c962e71a1a03515d 269 SMART SM00460 153 215 2.3E-16 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS20720 d6ffef1112aa3d33c962e71a1a03515d 269 Gene3D G3DSA:3.90.260.10 138 247 7.4E-11 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS20720 d6ffef1112aa3d33c962e71a1a03515d 269 PANTHER PTHR33490:SF5 1 256 1.5E-116 T 13-09-2016 PMA3_RS20720 d6ffef1112aa3d33c962e71a1a03515d 269 PANTHER PTHR33490 1 256 1.5E-116 T 13-09-2016 PMA3_RS20720 d6ffef1112aa3d33c962e71a1a03515d 269 SUPERFAMILY SSF54001 51 257 7.56E-47 T 13-09-2016 PMA3_RS20720 d6ffef1112aa3d33c962e71a1a03515d 269 Pfam PF01841 Transglutaminase-like superfamily 117 212 2.7E-21 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS20720 d6ffef1112aa3d33c962e71a1a03515d 269 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 5.6E-22 T 13-09-2016 IPR013589 Bacterial transglutaminase-like, N-terminal PMA3_RS26870 544e23bb948cd2eb016b6695a7c6e32a 1516 Pfam PF01835 MG2 domain 326 422 3.7E-16 T 13-09-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 PMA3_RS26870 544e23bb948cd2eb016b6695a7c6e32a 1516 Pfam PF00207 Alpha-2-macroglobulin family 857 944 6.2E-21 T 13-09-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 PMA3_RS26870 544e23bb948cd2eb016b6695a7c6e32a 1516 SMART SM01360 857 947 1.8E-22 T 13-09-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 PMA3_RS26870 544e23bb948cd2eb016b6695a7c6e32a 1516 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 646 792 1.9E-10 T 13-09-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 PMA3_RS26870 544e23bb948cd2eb016b6695a7c6e32a 1516 PANTHER PTHR11412 321 623 2.5E-33 T 13-09-2016 PMA3_RS26870 544e23bb948cd2eb016b6695a7c6e32a 1516 PANTHER PTHR11412 859 957 2.5E-33 T 13-09-2016 PMA3_RS26870 544e23bb948cd2eb016b6695a7c6e32a 1516 PANTHER PTHR11412 1301 1314 2.5E-33 T 13-09-2016 PMA3_RS26870 544e23bb948cd2eb016b6695a7c6e32a 1516 SMART SM01359 646 792 2.1E-26 T 13-09-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 PMA3_RS26870 544e23bb948cd2eb016b6695a7c6e32a 1516 SUPERFAMILY SSF48239 1044 1147 3.57E-13 T 13-09-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PMA3_RS26870 544e23bb948cd2eb016b6695a7c6e32a 1516 Gene3D G3DSA:1.50.10.20 1045 1155 2.5E-8 T 13-09-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PMA3_RS14430 8598e47abb18692170497740a279e3e4 315 Gene3D G3DSA:3.50.14.10 30 188 1.1E-6 T 13-09-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 PMA3_RS05615 7e070eb3cf552376ae9d5af9123548bf 254 PANTHER PTHR24220 5 254 2.5E-174 T 13-09-2016 PMA3_RS05615 7e070eb3cf552376ae9d5af9123548bf 254 PIRSF PIRSF039085 1 254 4.8E-117 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS05615 7e070eb3cf552376ae9d5af9123548bf 254 SUPERFAMILY SSF52540 4 248 6.39E-73 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS05615 7e070eb3cf552376ae9d5af9123548bf 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS05615 7e070eb3cf552376ae9d5af9123548bf 254 Pfam PF00005 ABC transporter 19 178 2.2E-33 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS05615 7e070eb3cf552376ae9d5af9123548bf 254 PANTHER PTHR24220:SF347 5 254 2.5E-174 T 13-09-2016 PMA3_RS05615 7e070eb3cf552376ae9d5af9123548bf 254 SMART SM00382 28 225 1.5E-13 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS05615 7e070eb3cf552376ae9d5af9123548bf 254 Gene3D G3DSA:3.40.50.300 4 249 1.4E-78 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22190 30aa83e288c4530320ca42354b5e7e88 573 PANTHER PTHR39559 1 568 2.5E-246 T 13-09-2016 PMA3_RS22190 30aa83e288c4530320ca42354b5e7e88 573 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 10 565 0.0 T 13-09-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PMA3_RS22190 30aa83e288c4530320ca42354b5e7e88 573 PIRSF PIRSF000719 1 572 2.0E-279 T 13-09-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PMA3_RS22190 30aa83e288c4530320ca42354b5e7e88 573 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 2 572 42.693 T 13-09-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PMA3_RS22190 30aa83e288c4530320ca42354b5e7e88 573 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 10 568 9.9E-234 T 13-09-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PMA3_RS27570 6b45c0a06489a9216c4b8de8c12a5b60 126 Gene3D G3DSA:2.60.40.1470 7 125 6.9E-45 T 13-09-2016 IPR007474 ApaG domain PMA3_RS27570 6b45c0a06489a9216c4b8de8c12a5b60 126 SUPERFAMILY SSF110069 7 126 2.22E-46 T 13-09-2016 IPR007474 ApaG domain PMA3_RS27570 6b45c0a06489a9216c4b8de8c12a5b60 126 PANTHER PTHR14289 10 123 7.0E-52 T 13-09-2016 PMA3_RS27570 6b45c0a06489a9216c4b8de8c12a5b60 126 Pfam PF04379 Protein of unknown function (DUF525) 19 103 2.7E-33 T 13-09-2016 IPR007474 ApaG domain PMA3_RS27570 6b45c0a06489a9216c4b8de8c12a5b60 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 32.628 T 13-09-2016 IPR023065 Uncharacterised protein family ApaG PMA3_RS13410 b3e66e3bbf09f31c9e9e6eedbcf2d208 121 Pfam PF00072 Response regulator receiver domain 8 114 2.0E-17 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13410 b3e66e3bbf09f31c9e9e6eedbcf2d208 121 SUPERFAMILY SSF52172 8 119 1.71E-26 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS13410 b3e66e3bbf09f31c9e9e6eedbcf2d208 121 PANTHER PTHR24423:SF438 4 121 7.7E-25 T 13-09-2016 PMA3_RS13410 b3e66e3bbf09f31c9e9e6eedbcf2d208 121 SMART SM00448 6 114 2.2E-17 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13410 b3e66e3bbf09f31c9e9e6eedbcf2d208 121 Gene3D G3DSA:3.40.50.2300 7 119 1.7E-28 T 13-09-2016 PMA3_RS13410 b3e66e3bbf09f31c9e9e6eedbcf2d208 121 PANTHER PTHR24423 4 121 7.7E-25 T 13-09-2016 PMA3_RS27195 109be7cd965daccd7e69e6873b825aec 130 PANTHER PTHR11758 1 130 2.6E-59 T 13-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27195 109be7cd965daccd7e69e6873b825aec 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.598 T 13-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27195 109be7cd965daccd7e69e6873b825aec 130 Gene3D G3DSA:3.30.1490.10 74 130 6.1E-27 T 13-09-2016 PMA3_RS27195 109be7cd965daccd7e69e6873b825aec 130 SUPERFAMILY SSF56047 2 130 9.16E-46 T 13-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27195 109be7cd965daccd7e69e6873b825aec 130 Pfam PF00410 Ribosomal protein S8 5 130 4.1E-48 T 13-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27195 109be7cd965daccd7e69e6873b825aec 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 13-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27195 109be7cd965daccd7e69e6873b825aec 130 Gene3D G3DSA:3.30.1370.30 2 71 4.8E-27 T 13-09-2016 PMA3_RS05270 3bf30a7002590203534dd46b92bebd10 154 Pfam PF05433 Glycine zipper 2TM domain 61 100 1.0E-6 T 13-09-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 PMA3_RS05270 3bf30a7002590203534dd46b92bebd10 154 PANTHER PTHR35603:SF1 2 153 5.3E-45 T 13-09-2016 PMA3_RS05270 3bf30a7002590203534dd46b92bebd10 154 PANTHER PTHR35603 2 153 5.3E-45 T 13-09-2016 PMA3_RS22490 d8a83d0aa2232609b592efa3b3b08dbc 252 Gene3D G3DSA:3.60.15.10 9 226 8.7E-33 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS22490 d8a83d0aa2232609b592efa3b3b08dbc 252 PANTHER PTHR13754:SF15 1 252 7.7E-74 T 13-09-2016 PMA3_RS22490 d8a83d0aa2232609b592efa3b3b08dbc 252 Pfam PF12706 Beta-lactamase superfamily domain 23 211 4.0E-19 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS22490 d8a83d0aa2232609b592efa3b3b08dbc 252 SUPERFAMILY SSF56281 1 220 2.23E-41 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS22490 d8a83d0aa2232609b592efa3b3b08dbc 252 SMART SM00849 11 171 3.2E-14 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS22490 d8a83d0aa2232609b592efa3b3b08dbc 252 PANTHER PTHR13754 1 252 7.7E-74 T 13-09-2016 PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 SMART SM00382 41 224 2.2E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 Pfam PF00005 ABC transporter 33 174 2.8E-35 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 Pfam PF08402 TOBE domain 286 367 1.4E-8 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 PANTHER PTHR24220 314 325 1.9E-136 T 13-09-2016 PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 PANTHER PTHR24220 18 295 1.9E-136 T 13-09-2016 PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 Gene3D G3DSA:3.40.50.300 7 248 8.1E-83 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 SUPERFAMILY SSF52540 16 255 8.46E-87 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 PANTHER PTHR24220:SF402 18 295 1.9E-136 T 13-09-2016 PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 PANTHER PTHR24220:SF402 314 325 1.9E-136 T 13-09-2016 PMA3_RS11210 0be18e4f86280ec234bbfc33a41f294b 384 SUPERFAMILY SSF50331 250 368 7.37E-9 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 Gene3D G3DSA:3.40.50.1220 206 278 1.6E-40 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 Gene3D G3DSA:3.40.50.1220 16 37 1.6E-40 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 Gene3D G3DSA:3.40.50.1220 87 124 1.6E-40 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 PANTHER PTHR11085:SF6 8 148 3.9E-102 T 13-09-2016 PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 Gene3D G3DSA:3.30.1600.10 125 200 1.9E-20 T 13-09-2016 IPR026591 Sirtuin family, catalytic core small domain PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 Gene3D G3DSA:3.30.1600.10 38 73 1.9E-20 T 13-09-2016 IPR026591 Sirtuin family, catalytic core small domain PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 SUPERFAMILY SSF52467 9 275 5.14E-72 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 PANTHER PTHR11085 8 148 3.9E-102 T 13-09-2016 IPR003000 Sirtuin family GO:0070403 PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 PANTHER PTHR11085 166 279 3.9E-102 T 13-09-2016 IPR003000 Sirtuin family GO:0070403 PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 Pfam PF02146 Sir2 family 27 227 4.2E-44 T 13-09-2016 IPR003000 Sirtuin family GO:0070403 PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 4 274 58.348 T 13-09-2016 IPR026587 Sirtuin, class II PMA3_RS17400 ddc3b99e4506eb861c8e1f5f3548c1b6 280 PANTHER PTHR11085:SF6 166 279 3.9E-102 T 13-09-2016 PMA3_RS21770 351f545a425fb4a7a962a2dd46fe7ed3 115 PANTHER PTHR37166:SF1 45 115 1.8E-21 T 13-09-2016 PMA3_RS21770 351f545a425fb4a7a962a2dd46fe7ed3 115 Gene3D G3DSA:3.30.160.170 32 110 7.4E-24 T 13-09-2016 IPR005186 FlaG protein PMA3_RS21770 351f545a425fb4a7a962a2dd46fe7ed3 115 Pfam PF03646 FlaG protein 34 112 4.0E-23 T 13-09-2016 IPR005186 FlaG protein PMA3_RS21770 351f545a425fb4a7a962a2dd46fe7ed3 115 SUPERFAMILY SSF160214 35 115 2.88E-24 T 13-09-2016 IPR005186 FlaG protein PMA3_RS21770 351f545a425fb4a7a962a2dd46fe7ed3 115 PANTHER PTHR37166 45 115 1.8E-21 T 13-09-2016 PMA3_RS23365 90cdc8c2e218e09fc831ad64228d2695 495 Pfam PF05872 Bacterial protein of unknown function (DUF853) 9 494 1.5E-208 T 13-09-2016 IPR033186 Helicase HerA-like C-terminal PMA3_RS23365 90cdc8c2e218e09fc831ad64228d2695 495 Gene3D G3DSA:3.40.50.300 207 385 8.4E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23365 90cdc8c2e218e09fc831ad64228d2695 495 Gene3D G3DSA:3.40.50.300 6 111 8.4E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23365 90cdc8c2e218e09fc831ad64228d2695 495 SUPERFAMILY SSF52540 4 387 3.12E-46 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23365 90cdc8c2e218e09fc831ad64228d2695 495 PANTHER PTHR30121 2 445 2.4E-151 T 13-09-2016 PMA3_RS23365 90cdc8c2e218e09fc831ad64228d2695 495 PANTHER PTHR30121:SF3 2 445 2.4E-151 T 13-09-2016 PMA3_RS14175 3909f30d9fd9c56192b61416c90acca9 451 Gene3D G3DSA:2.50.20.10 339 445 8.3E-35 T 13-09-2016 PMA3_RS14175 3909f30d9fd9c56192b61416c90acca9 451 Gene3D G3DSA:2.50.20.10 158 307 8.3E-35 T 13-09-2016 PMA3_RS14175 3909f30d9fd9c56192b61416c90acca9 451 Pfam PF07044 Protein of unknown function (DUF1329) 83 445 1.7E-130 T 13-09-2016 IPR010752 Protein of unknown function DUF1329 PMA3_RS28570 c19fe76f849b767ddaa289d838d60bff 496 SUPERFAMILY SSF63411 64 269 1.52E-40 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS28570 c19fe76f849b767ddaa289d838d60bff 496 PANTHER PTHR11851 72 468 8.3E-63 T 13-09-2016 PMA3_RS28570 c19fe76f849b767ddaa289d838d60bff 496 Pfam PF05193 Peptidase M16 inactive domain 231 406 5.7E-30 T 13-09-2016 IPR007863 Peptidase M16, C-terminal PMA3_RS28570 c19fe76f849b767ddaa289d838d60bff 496 PANTHER PTHR11851:SF140 72 468 8.3E-63 T 13-09-2016 PMA3_RS28570 c19fe76f849b767ddaa289d838d60bff 496 SUPERFAMILY SSF63411 294 477 3.83E-44 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS28570 c19fe76f849b767ddaa289d838d60bff 496 Gene3D G3DSA:3.30.830.10 298 472 3.3E-29 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28570 c19fe76f849b767ddaa289d838d60bff 496 Gene3D G3DSA:3.30.830.10 66 279 9.2E-40 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 84 99 - T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 PANTHER PTHR30330:SF1 1 466 6.1E-243 T 13-09-2016 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 PRINTS PR00175 Sodium/alanine symporter signature 401 421 3.3E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 PRINTS PR00175 Sodium/alanine symporter signature 340 362 3.3E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 PRINTS PR00175 Sodium/alanine symporter signature 203 222 3.3E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 PRINTS PR00175 Sodium/alanine symporter signature 175 193 3.3E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 PRINTS PR00175 Sodium/alanine symporter signature 294 312 3.3E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 PRINTS PR00175 Sodium/alanine symporter signature 84 106 3.3E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 Pfam PF01235 Sodium:alanine symporter family 49 445 1.0E-150 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 PANTHER PTHR30330 1 466 6.1E-243 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS29765 94a3c63d50d2e5ad796ca8c9f2dba563 483 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 432 1.8E-142 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS23980 f8d7cd5dc31a5899d41fad7d2a7bfeff 1711 Gene3D G3DSA:1.20.1270.130 1396 1459 4.9E-7 T 13-09-2016 PMA3_RS23980 f8d7cd5dc31a5899d41fad7d2a7bfeff 1711 Gene3D G3DSA:3.80.10.10 1175 1319 1.6E-17 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS23980 f8d7cd5dc31a5899d41fad7d2a7bfeff 1711 Gene3D G3DSA:1.20.58.360 1462 1612 8.8E-31 T 13-09-2016 PMA3_RS23980 f8d7cd5dc31a5899d41fad7d2a7bfeff 1711 SUPERFAMILY SSF52058 1170 1321 1.39E-16 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS23980 f8d7cd5dc31a5899d41fad7d2a7bfeff 1711 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 1395 1616 3.3E-45 T 13-09-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 Gene3D G3DSA:1.25.40.10 616 740 7.5E-10 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 Pfam PF13432 Tetratricopeptide repeat 295 340 2.0E-4 T 13-09-2016 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 Pfam PF13432 Tetratricopeptide repeat 619 671 0.0022 T 13-09-2016 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 Gene3D G3DSA:1.25.40.10 126 220 6.0E-8 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 Gene3D G3DSA:1.25.40.10 276 344 6.0E-8 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 809 1152 3.1E-110 T 13-09-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 UniPathway: UPA00694 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 PANTHER PTHR23083 284 435 6.2E-18 T 13-09-2016 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 PANTHER PTHR23083 478 548 6.2E-18 T 13-09-2016 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 PANTHER PTHR23083 10 17 6.2E-18 T 13-09-2016 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 PANTHER PTHR23083 593 742 6.2E-18 T 13-09-2016 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 PANTHER PTHR23083 117 194 6.2E-18 T 13-09-2016 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 PANTHER PTHR23083 767 795 6.2E-18 T 13-09-2016 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 SUPERFAMILY SSF48452 299 443 6.2E-15 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 Gene3D G3DSA:1.25.40.10 362 561 3.5E-16 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 Pfam PF14559 Tetratricopeptide repeat 371 435 7.2E-6 T 13-09-2016 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 SUPERFAMILY SSF48452 126 214 8.79E-8 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 SUPERFAMILY SSF48452 295 345 8.79E-8 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 SMART SM00028 361 394 17.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 SMART SM00028 612 645 27.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 SMART SM00028 313 346 25.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 SMART SM00028 505 538 53.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 SUPERFAMILY SSF48452 478 555 5.07E-14 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 SUPERFAMILY SSF48452 618 669 5.07E-14 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 PRINTS PR01441 Cellulose synthase subunit C signature 110 122 2.0E-5 T 13-09-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS00340 2ed014acd9eafedb7409df4b4c009b9b 1172 PRINTS PR01441 Cellulose synthase subunit C signature 1013 1037 2.0E-5 T 13-09-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 Gene3D G3DSA:1.10.10.60 201 248 2.0E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 SUPERFAMILY SSF46689 199 248 5.38E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 Gene3D G3DSA:2.60.120.10 16 72 1.1E-7 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 Pfam PF12833 Helix-turn-helix domain 169 247 4.7E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 Gene3D G3DSA:1.10.10.60 154 200 4.6E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 SUPERFAMILY SSF51182 16 122 3.86E-9 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 SMART SM00342 163 246 3.7E-27 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 PANTHER PTHR11019:SF85 8 254 4.8E-69 T 13-09-2016 PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 PANTHER PTHR11019 8 254 4.8E-69 T 13-09-2016 PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 SUPERFAMILY SSF46689 154 197 2.6E-5 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21960 47eda70a837d422a9d4ac7f553cb4c22 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 200 242 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS29505 8006941607e4ddf572979db82dbddeb7 402 Gene3D G3DSA:3.40.50.1950 2 186 6.2E-65 T 13-09-2016 IPR003382 Flavoprotein GO:0003824 PMA3_RS29505 8006941607e4ddf572979db82dbddeb7 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 369 6.9E-70 T 13-09-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PMA3_RS29505 8006941607e4ddf572979db82dbddeb7 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 395 2.8E-141 T 13-09-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 PMA3_RS29505 8006941607e4ddf572979db82dbddeb7 402 PANTHER PTHR14359 2 402 4.8E-187 T 13-09-2016 PMA3_RS29505 8006941607e4ddf572979db82dbddeb7 402 Pfam PF02441 Flavoprotein 7 135 8.6E-33 T 13-09-2016 IPR003382 Flavoprotein GO:0003824 PMA3_RS29505 8006941607e4ddf572979db82dbddeb7 402 PANTHER PTHR14359:SF20 2 402 4.8E-187 T 13-09-2016 PMA3_RS29505 8006941607e4ddf572979db82dbddeb7 402 SUPERFAMILY SSF102645 184 401 5.75E-75 T 13-09-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PMA3_RS29505 8006941607e4ddf572979db82dbddeb7 402 SUPERFAMILY SSF52507 1 178 9.03E-60 T 13-09-2016 IPR003382 Flavoprotein GO:0003824 PMA3_RS29505 8006941607e4ddf572979db82dbddeb7 402 Gene3D G3DSA:3.40.50.10300 187 401 7.5E-87 T 13-09-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PMA3_RS26315 60af8f125df5dbad67e2ff6971c2ac5d 343 PANTHER PTHR21266 8 324 7.4E-37 T 13-09-2016 PMA3_RS26315 60af8f125df5dbad67e2ff6971c2ac5d 343 Pfam PF00355 Rieske [2Fe-2S] domain 18 99 8.3E-19 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS26315 60af8f125df5dbad67e2ff6971c2ac5d 343 Gene3D G3DSA:2.102.10.10 17 128 5.5E-31 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS26315 60af8f125df5dbad67e2ff6971c2ac5d 343 SUPERFAMILY SSF50022 10 134 8.12E-33 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS26315 60af8f125df5dbad67e2ff6971c2ac5d 343 SUPERFAMILY SSF55961 127 328 2.61E-15 T 13-09-2016 PMA3_RS11720 54d1b8a29d0e6080c9644118839c3427 411 SUPERFAMILY SSF46894 311 377 5.44E-13 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS11720 54d1b8a29d0e6080c9644118839c3427 411 Gene3D G3DSA:3.30.450.20 191 268 8.2E-5 T 13-09-2016 PMA3_RS11720 54d1b8a29d0e6080c9644118839c3427 411 SMART SM00421 319 376 7.4E-8 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11720 54d1b8a29d0e6080c9644118839c3427 411 Pfam PF00196 Bacterial regulatory proteins, luxR family 322 375 1.3E-6 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS11720 54d1b8a29d0e6080c9644118839c3427 411 Gene3D G3DSA:1.10.10.10 317 378 3.6E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 SUPERFAMILY SSF48452 592 751 7.83E-22 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 PANTHER PTHR23083 567 773 1.3E-17 T 13-09-2016 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 PANTHER PTHR23083 476 504 1.3E-17 T 13-09-2016 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 Pfam PF13435 Cytochrome c554 and c-prime 211 251 6.4E-5 T 13-09-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 Pfam PF13435 Cytochrome c554 and c-prime 83 110 0.0059 T 13-09-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 SUPERFAMILY SSF48371 481 580 4.95E-7 T 13-09-2016 IPR016024 Armadillo-type fold GO:0005488 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 346 375 5.6E-6 T 13-09-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 SMART SM00028 715 748 250.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 SMART SM00028 613 646 9.9 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 SMART SM00028 681 714 4.4 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 SUPERFAMILY SSF48695 78 107 2.42E-59 T 13-09-2016 IPR011031 Multihaem cytochrome PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 SUPERFAMILY SSF48695 157 293 2.42E-59 T 13-09-2016 IPR011031 Multihaem cytochrome PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 SUPERFAMILY SSF48695 330 478 2.42E-59 T 13-09-2016 IPR011031 Multihaem cytochrome PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 Gene3D G3DSA:1.10.710.10 204 295 4.6E-39 T 13-09-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 Gene3D G3DSA:1.10.710.10 404 454 4.6E-39 T 13-09-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 Gene3D G3DSA:1.10.710.10 76 120 4.6E-39 T 13-09-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 Gene3D G3DSA:1.10.710.10 334 372 4.6E-39 T 13-09-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 Pfam PF14559 Tetratricopeptide repeat 726 779 7.6E-6 T 13-09-2016 PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 Gene3D G3DSA:1.25.10.10 522 585 3.6E-5 T 13-09-2016 IPR011989 Armadillo-like helical PMA3_RS15120 dac1dd0961626fae2338093c22bda592 786 Gene3D G3DSA:1.25.40.10 591 777 4.4E-28 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS22960 e100809b3318d19466e48f854a5e353d 209 Pfam PF03995 Peptidase inhibitor family I36 85 138 3.7E-6 T 13-09-2016 PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 PANTHER PTHR18866 1 601 4.0E-247 T 13-09-2016 PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 597 2.2E-254 T 13-09-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 Pfam PF00682 HMGL-like 5 267 3.0E-51 T 13-09-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 Pfam PF00364 Biotin-requiring enzyme 535 600 1.3E-16 T 13-09-2016 IPR000089 Biotin/lipoyl attachment PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 SUPERFAMILY SSF89000 297 447 5.89E-51 T 13-09-2016 PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 Gene3D G3DSA:3.20.20.70 1 283 1.9E-118 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 Gene3D G3DSA:2.40.50.100 529 601 5.9E-24 T 13-09-2016 PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 SUPERFAMILY SSF51230 528 601 4.45E-21 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 PANTHER PTHR18866:SF109 1 601 4.0E-247 T 13-09-2016 PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 SUPERFAMILY SSF51569 1 301 3.48E-91 T 13-09-2016 PMA3_RS29825 31f0f3ae7a1a75148059341dff238bb9 602 Pfam PF02436 Conserved carboxylase domain 292 482 2.2E-56 T 13-09-2016 IPR003379 Carboxylase, conserved domain PMA3_RS24255 7b81bc35553e30668d3d2d1758f6e537 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 16 171 1.3E-32 T 13-09-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 PMA3_RS24255 7b81bc35553e30668d3d2d1758f6e537 173 SMART SM00271 4 69 1.1E-11 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS24255 7b81bc35553e30668d3d2d1758f6e537 173 Gene3D G3DSA:1.10.287.110 6 76 1.0E-25 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS24255 7b81bc35553e30668d3d2d1758f6e537 173 Pfam PF00226 DnaJ domain 6 73 1.5E-8 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS24255 7b81bc35553e30668d3d2d1758f6e537 173 SUPERFAMILY SSF47144 84 173 6.93E-23 T 13-09-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 PMA3_RS24255 7b81bc35553e30668d3d2d1758f6e537 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 4 172 21.969 T 13-09-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 PMA3_RS24255 7b81bc35553e30668d3d2d1758f6e537 173 PANTHER PTHR14021 6 173 8.1E-49 T 13-09-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 PMA3_RS24255 7b81bc35553e30668d3d2d1758f6e537 173 Gene3D G3DSA:1.20.1280.20 86 173 2.5E-25 T 13-09-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 PMA3_RS24255 7b81bc35553e30668d3d2d1758f6e537 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 90 164 2.2E-15 T 13-09-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 PMA3_RS24255 7b81bc35553e30668d3d2d1758f6e537 173 SUPERFAMILY SSF46565 6 77 6.67E-19 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS28270 a6a338e5fe7e244ad443d3083740644f 134 PANTHER PTHR11049 1 114 6.5E-62 T 13-09-2016 PMA3_RS28270 a6a338e5fe7e244ad443d3083740644f 134 SUPERFAMILY SSF54637 4 122 3.91E-25 T 13-09-2016 IPR029069 HotDog domain PMA3_RS28270 a6a338e5fe7e244ad443d3083740644f 134 Pfam PF03061 Thioesterase superfamily 17 92 5.2E-13 T 13-09-2016 IPR006683 Thioesterase domain PMA3_RS28270 a6a338e5fe7e244ad443d3083740644f 134 PANTHER PTHR11049:SF13 1 114 6.5E-62 T 13-09-2016 PMA3_RS28270 a6a338e5fe7e244ad443d3083740644f 134 Gene3D G3DSA:3.10.129.10 3 120 2.2E-23 T 13-09-2016 IPR029069 HotDog domain PMA3_RS01295 f284b361c01bc17312216c49f3975139 510 Gene3D G3DSA:1.20.200.10 198 503 1.0E-127 T 13-09-2016 PMA3_RS01295 f284b361c01bc17312216c49f3975139 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 7 507 7.6E-220 T 13-09-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS01295 f284b361c01bc17312216c49f3975139 510 Pfam PF00221 Aromatic amino acid lyase 11 470 2.2E-184 T 13-09-2016 IPR001106 Aromatic amino acid lyase PMA3_RS01295 f284b361c01bc17312216c49f3975139 510 PANTHER PTHR10362 8 494 6.2E-249 T 13-09-2016 PMA3_RS01295 f284b361c01bc17312216c49f3975139 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 13-09-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 PMA3_RS01295 f284b361c01bc17312216c49f3975139 510 Gene3D G3DSA:1.10.275.10 6 197 8.8E-73 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS01295 f284b361c01bc17312216c49f3975139 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.278 T 13-09-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS01295 f284b361c01bc17312216c49f3975139 510 SUPERFAMILY SSF48557 8 505 4.87E-190 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS04835 c4d62b8e91f2320e9f14b2d06ddcc376 247 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 12 243 1.2E-99 T 13-09-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PMA3_RS04835 c4d62b8e91f2320e9f14b2d06ddcc376 247 Gene3D G3DSA:3.40.1160.10 8 243 3.5E-86 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS04835 c4d62b8e91f2320e9f14b2d06ddcc376 247 PIRSF PIRSF005650 8 247 2.7E-90 T 13-09-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PMA3_RS04835 c4d62b8e91f2320e9f14b2d06ddcc376 247 SUPERFAMILY SSF53633 10 242 2.23E-73 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS04835 c4d62b8e91f2320e9f14b2d06ddcc376 247 PANTHER PTHR21499:SF23 1 244 3.1E-113 T 13-09-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PMA3_RS04835 c4d62b8e91f2320e9f14b2d06ddcc376 247 Hamap MF_01220_B Uridylate kinase [pyrH]. 10 243 43.739 T 13-09-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PMA3_RS04835 c4d62b8e91f2320e9f14b2d06ddcc376 247 PANTHER PTHR21499 1 244 3.1E-113 T 13-09-2016 PMA3_RS04835 c4d62b8e91f2320e9f14b2d06ddcc376 247 Pfam PF00696 Amino acid kinase family 13 222 4.5E-27 T 13-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PMA3_RS09835 552f116572f6142258bc6138b243c109 207 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 10 193 37.221 T 13-09-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 PMA3_RS09835 552f116572f6142258bc6138b243c109 207 PANTHER PTHR30108 8 206 3.6E-98 T 13-09-2016 PMA3_RS09835 552f116572f6142258bc6138b243c109 207 Pfam PF02441 Flavoprotein 11 137 2.2E-25 T 13-09-2016 IPR003382 Flavoprotein GO:0003824 PMA3_RS09835 552f116572f6142258bc6138b243c109 207 Gene3D G3DSA:3.40.50.1950 11 194 1.1E-78 T 13-09-2016 IPR003382 Flavoprotein GO:0003824 PMA3_RS09835 552f116572f6142258bc6138b243c109 207 SUPERFAMILY SSF52507 11 193 1.23E-60 T 13-09-2016 IPR003382 Flavoprotein GO:0003824 PMA3_RS09835 552f116572f6142258bc6138b243c109 207 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 11 191 2.0E-73 T 13-09-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 PMA3_RS09835 552f116572f6142258bc6138b243c109 207 PANTHER PTHR30108:SF10 8 206 3.6E-98 T 13-09-2016 PMA3_RS20825 64835aa161173f52fdfc3633224336ec 283 Pfam PF09347 Domain of unknown function (DUF1989) 41 215 1.7E-66 T 13-09-2016 IPR018959 Domain of unknown function DUF1989 PMA3_RS20825 64835aa161173f52fdfc3633224336ec 283 PANTHER PTHR31527 1 283 3.0E-93 T 13-09-2016 PMA3_RS20825 64835aa161173f52fdfc3633224336ec 283 PANTHER PTHR31527:SF0 1 283 3.0E-93 T 13-09-2016 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 Gene3D G3DSA:1.10.287.130 211 275 3.7E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 SUPERFAMILY SSF47384 205 277 5.49E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 SMART SM00304 168 220 5.8E-4 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 Pfam PF00672 HAMP domain 149 216 6.2E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 SMART SM00387 318 430 3.5E-28 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 Gene3D G3DSA:3.30.565.10 283 430 4.7E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 8.0E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 8.0E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 8.0E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 8.0E-15 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 SMART SM00388 221 280 2.4E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 428 6.7E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 PANTHER PTHR24423 140 146 3.5E-61 T 13-09-2016 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 PANTHER PTHR24423 162 428 3.5E-61 T 13-09-2016 PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 SUPERFAMILY SSF55874 280 429 2.36E-33 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS00800 95e914de93ba442ef6728a36d95e20b9 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 276 1.1E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS22605 6ab5152217f52af0c879ce2bb04f1c3d 230 Pfam PF03167 Uracil DNA glycosylase superfamily 60 214 6.8E-25 T 13-09-2016 IPR005122 Uracil-DNA glycosylase-like PMA3_RS22605 6ab5152217f52af0c879ce2bb04f1c3d 230 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 11 219 5.4E-86 T 13-09-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PMA3_RS22605 6ab5152217f52af0c879ce2bb04f1c3d 230 Gene3D G3DSA:3.40.470.10 6 227 2.3E-103 T 13-09-2016 IPR005122 Uracil-DNA glycosylase-like PMA3_RS22605 6ab5152217f52af0c879ce2bb04f1c3d 230 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 10 226 40.169 T 13-09-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PMA3_RS22605 6ab5152217f52af0c879ce2bb04f1c3d 230 PANTHER PTHR11264 9 230 6.1E-138 T 13-09-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PMA3_RS22605 6ab5152217f52af0c879ce2bb04f1c3d 230 SMART SM00986 55 215 7.6E-35 T 13-09-2016 IPR005122 Uracil-DNA glycosylase-like PMA3_RS22605 6ab5152217f52af0c879ce2bb04f1c3d 230 SMART SM00987 55 215 7.6E-35 T 13-09-2016 PMA3_RS22605 6ab5152217f52af0c879ce2bb04f1c3d 230 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 63 72 - T 13-09-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 PMA3_RS22605 6ab5152217f52af0c879ce2bb04f1c3d 230 SUPERFAMILY SSF52141 8 227 2.4E-94 T 13-09-2016 IPR005122 Uracil-DNA glycosylase-like PMA3_RS02005 d105c7f2c7c09627f7c747442a8541b1 283 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 7.4E-110 T 13-09-2016 IPR022522 Flagellar motor stator, MotA PMA3_RS02005 d105c7f2c7c09627f7c747442a8541b1 283 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 239 5.8E-9 T 13-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PMA3_RS02005 d105c7f2c7c09627f7c747442a8541b1 283 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 13-09-2016 IPR000540 Flagellar motor protein MotA, conserved site PMA3_RS02005 d105c7f2c7c09627f7c747442a8541b1 283 PANTHER PTHR30433 1 283 1.3E-143 T 13-09-2016 PMA3_RS02005 d105c7f2c7c09627f7c747442a8541b1 283 PANTHER PTHR30433:SF4 1 283 1.3E-143 T 13-09-2016 IPR022522 Flagellar motor stator, MotA PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Gene3D G3DSA:3.40.50.1460 356 474 8.5E-7 T 13-09-2016 IPR029030 Caspase-like domain PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF02493 MORN repeat 103 118 0.2 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF02493 MORN repeat 58 79 6.3 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF02493 MORN repeat 263 285 0.24 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF02493 MORN repeat 219 238 2.7 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF02493 MORN repeat 194 216 5.6E-5 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF02493 MORN repeat 81 97 0.51 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF02493 MORN repeat 125 146 0.058 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF02493 MORN repeat 148 169 0.039 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF02493 MORN repeat 35 56 0.037 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF02493 MORN repeat 171 192 0.0058 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 PANTHER PTHR23084:SF131 34 295 3.3E-57 T 13-09-2016 PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SUPERFAMILY SSF82185 30 116 3.92E-17 T 13-09-2016 PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SUPERFAMILY SSF82185 120 237 1.44E-26 T 13-09-2016 PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Gene3D G3DSA:2.20.110.10 225 295 1.8E-14 T 13-09-2016 PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Gene3D G3DSA:2.20.110.10 127 224 2.2E-23 T 13-09-2016 PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Gene3D G3DSA:2.20.110.10 29 126 2.2E-18 T 13-09-2016 PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SUPERFAMILY SSF82185 213 300 1.44E-14 T 13-09-2016 PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SUPERFAMILY SSF52129 386 524 3.56E-6 T 13-09-2016 IPR029030 Caspase-like domain PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 Pfam PF01650 Peptidase C13 family 336 541 2.5E-42 T 13-09-2016 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SMART SM00698 238 259 5.4 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SMART SM00698 261 282 12.0 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SMART SM00698 169 190 14.0 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SMART SM00698 101 122 3.4 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SMART SM00698 146 167 3.8 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SMART SM00698 123 144 2.3 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SMART SM00698 33 54 3.4 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SMART SM00698 79 100 0.62 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 SMART SM00698 192 213 0.052 T 13-09-2016 IPR003409 MORN motif PMA3_RS26665 276eca5a9638bbfb1de85b1faba23105 572 PANTHER PTHR23084 34 295 3.3E-57 T 13-09-2016 PMA3_RS22290 63cf9abb0e2dc175f6310b64256d4e94 234 PANTHER PTHR34698:SF2 1 234 3.5E-85 T 13-09-2016 PMA3_RS22290 63cf9abb0e2dc175f6310b64256d4e94 234 SUPERFAMILY SSF160467 4 95 1.96E-15 T 13-09-2016 PMA3_RS22290 63cf9abb0e2dc175f6310b64256d4e94 234 Pfam PF02682 Allophanate hydrolase subunit 1 4 203 7.7E-62 T 13-09-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PMA3_RS22290 63cf9abb0e2dc175f6310b64256d4e94 234 SUPERFAMILY SSF50891 91 220 1.44E-39 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS22290 63cf9abb0e2dc175f6310b64256d4e94 234 PANTHER PTHR34698 1 234 3.5E-85 T 13-09-2016 PMA3_RS22290 63cf9abb0e2dc175f6310b64256d4e94 234 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 12 212 1.6E-43 T 13-09-2016 IPR010016 KipI family PMA3_RS22290 63cf9abb0e2dc175f6310b64256d4e94 234 SMART SM00796 3 204 3.0E-86 T 13-09-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PMA3_RS22290 63cf9abb0e2dc175f6310b64256d4e94 234 Gene3D G3DSA:2.40.100.10 91 224 5.2E-45 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS22290 63cf9abb0e2dc175f6310b64256d4e94 234 Gene3D G3DSA:3.30.1360.40 11 80 1.4E-12 T 13-09-2016 IPR024946 Arginine repressor C-terminal-like domain PMA3_RS07905 1b94829ea278f6e1fe40d7fdb04e6bdf 92 Pfam PF12021 Protein of unknown function (DUF3509) 4 85 6.2E-32 T 13-09-2016 IPR021898 Protein of unknown function DUF3509 PMA3_RS21660 326f8803998b7c0d8517cd5cd1319bed 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.3E-16 T 13-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PMA3_RS21660 326f8803998b7c0d8517cd5cd1319bed 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.3E-16 T 13-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PMA3_RS21660 326f8803998b7c0d8517cd5cd1319bed 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.3E-16 T 13-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PMA3_RS21660 326f8803998b7c0d8517cd5cd1319bed 89 PANTHER PTHR34040:SF2 1 89 5.0E-36 T 13-09-2016 PMA3_RS21660 326f8803998b7c0d8517cd5cd1319bed 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 5.0E-27 T 13-09-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 PMA3_RS21660 326f8803998b7c0d8517cd5cd1319bed 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.7E-27 T 13-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PMA3_RS21660 326f8803998b7c0d8517cd5cd1319bed 89 PANTHER PTHR34040 1 89 5.0E-36 T 13-09-2016 PMA3_RS21660 326f8803998b7c0d8517cd5cd1319bed 89 PIRSF PIRSF004669 1 89 2.9E-28 T 13-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PANTHER PTHR24322 155 186 7.4E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PANTHER PTHR24322 10 137 7.4E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 8.2E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.2E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 8.2E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.2E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.2E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.2E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 4.9E-72 T 13-09-2016 PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 Gene3D G3DSA:3.40.50.720 3 248 4.8E-87 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 SUPERFAMILY SSF51735 4 248 2.2E-85 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.2E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS08805 f4dd4cf4979272658f35e620fc58152c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS04810 6f3c971439b305e462ec794ceb07dbd4 399 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 395 1.3E-206 T 13-09-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 PMA3_RS04810 6f3c971439b305e462ec794ceb07dbd4 399 SUPERFAMILY SSF53383 2 395 3.09E-91 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS04810 6f3c971439b305e462ec794ceb07dbd4 399 PANTHER PTHR11751 12 394 4.8E-142 T 13-09-2016 PMA3_RS04810 6f3c971439b305e462ec794ceb07dbd4 399 Gene3D G3DSA:3.40.640.10 44 265 1.5E-62 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS04810 6f3c971439b305e462ec794ceb07dbd4 399 Pfam PF00155 Aminotransferase class I and II 32 391 1.1E-49 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS04810 6f3c971439b305e462ec794ceb07dbd4 399 Gene3D G3DSA:3.90.1150.10 266 395 1.7E-25 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS04810 6f3c971439b305e462ec794ceb07dbd4 399 PANTHER PTHR11751:SF354 12 394 4.8E-142 T 13-09-2016 PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 PANTHER PTHR41706 1 310 6.8E-138 T 13-09-2016 PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 4 310 4.3E-141 T 13-09-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 Gene3D G3DSA:3.30.360.10 145 285 3.3E-74 T 13-09-2016 PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 SUPERFAMILY SSF55347 132 285 6.08E-66 T 13-09-2016 PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 PIRSF PIRSF015689 1 312 6.9E-132 T 13-09-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 SMART SM00859 6 124 6.0E-13 T 13-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 312 145.98 T 13-09-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 132 285 2.9E-63 T 13-09-2016 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 9.8E-12 T 13-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 SUPERFAMILY SSF51735 1 156 4.06E-29 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18075 596ab4d6c2ce92cad41ef518fb0f88ef 312 Gene3D G3DSA:3.40.50.720 1 144 1.9E-75 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS00595 5bf81ce39bbd5daade06769635195fef 228 Pfam PF13545 Crp-like helix-turn-helix domain 153 225 2.2E-16 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS00595 5bf81ce39bbd5daade06769635195fef 228 SUPERFAMILY SSF51206 12 145 6.81E-30 T 13-09-2016 IPR018490 Cyclic nucleotide-binding-like PMA3_RS00595 5bf81ce39bbd5daade06769635195fef 228 PANTHER PTHR24567:SF30 1 226 6.5E-44 T 13-09-2016 PMA3_RS00595 5bf81ce39bbd5daade06769635195fef 228 Gene3D G3DSA:2.60.120.10 14 148 3.6E-29 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS00595 5bf81ce39bbd5daade06769635195fef 228 SMART SM00100 15 133 4.4E-9 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS00595 5bf81ce39bbd5daade06769635195fef 228 SMART SM00419 170 218 2.4E-9 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS00595 5bf81ce39bbd5daade06769635195fef 228 Pfam PF00027 Cyclic nucleotide-binding domain 34 120 1.1E-18 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS00595 5bf81ce39bbd5daade06769635195fef 228 PANTHER PTHR24567 1 226 6.5E-44 T 13-09-2016 PMA3_RS00595 5bf81ce39bbd5daade06769635195fef 228 Gene3D G3DSA:1.10.10.10 151 226 4.0E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00595 5bf81ce39bbd5daade06769635195fef 228 SUPERFAMILY SSF46785 151 226 2.3E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 SUPERFAMILY SSF51206 21 158 4.71E-28 T 13-09-2016 IPR018490 Cyclic nucleotide-binding-like PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 SMART SM00419 183 231 1.6E-7 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 189 205 8.0E-7 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 205 220 8.0E-7 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 PANTHER PTHR24567 16 238 4.2E-66 T 13-09-2016 PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 SMART SM00100 26 147 1.4E-11 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 Gene3D G3DSA:1.10.10.10 167 239 2.5E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 SUPERFAMILY SSF46785 162 243 1.18E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 Pfam PF00027 Cyclic nucleotide-binding domain 47 128 2.9E-14 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 Pfam PF13545 Crp-like helix-turn-helix domain 164 238 7.8E-15 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 PANTHER PTHR24567:SF28 16 238 4.2E-66 T 13-09-2016 PMA3_RS12530 b7d9abc3a00ce787461375e6a5d241db 248 Gene3D G3DSA:2.60.120.10 16 166 2.5E-24 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 SUPERFAMILY SSF102114 25 333 1.31E-76 T 13-09-2016 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 PANTHER PTHR11228:SF32 25 361 2.7E-115 T 13-09-2016 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 391 193.792 T 13-09-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 21 381 3.7E-186 T 13-09-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 PANTHER PTHR11228 25 361 2.7E-115 T 13-09-2016 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 PIRSF PIRSF037420 11 374 6.1E-135 T 13-09-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 Pfam PF13186 Iron-sulfur cluster-binding domain 259 324 1.6E-8 T 13-09-2016 IPR023885 4Fe4S-binding SPASM domain PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 SMART SM00729 26 229 3.4E-4 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 Pfam PF13353 4Fe-4S single cluster domain 33 116 1.4E-7 T 13-09-2016 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 32 43 - T 13-09-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 Pfam PF04055 Radical SAM superfamily 32 187 3.3E-24 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 Gene3D G3DSA:3.20.20.70 25 342 4.2E-69 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS27730 5de45ba4fe0effd2e0ce7bdbfc068064 391 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 266 351 2.1E-7 T 13-09-2016 IPR023885 4Fe4S-binding SPASM domain PMA3_RS24205 b72e2283cbdd9046056fe553d05feb52 213 Gene3D G3DSA:1.25.40.10 43 192 2.8E-4 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24205 b72e2283cbdd9046056fe553d05feb52 213 Pfam PF09976 Tetratricopeptide repeat-like domain 13 210 4.6E-61 T 13-09-2016 IPR018704 Tetratricopeptide repeat-like domain PMA3_RS24205 b72e2283cbdd9046056fe553d05feb52 213 SUPERFAMILY SSF48452 98 195 5.06E-7 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24205 b72e2283cbdd9046056fe553d05feb52 213 PIRSF PIRSF006170 1 213 1.6E-64 T 13-09-2016 IPR026039 Uncharacterised protein family UPF0070 PMA3_RS24205 b72e2283cbdd9046056fe553d05feb52 213 PANTHER PTHR38035 1 210 3.1E-70 T 13-09-2016 PMA3_RS18790 64e9ddcb9fa5f55fe914b077baa7eaf6 369 Gene3D G3DSA:3.40.190.10 126 247 1.5E-18 T 13-09-2016 PMA3_RS18790 64e9ddcb9fa5f55fe914b077baa7eaf6 369 Pfam PF09084 NMT1/THI5 like 83 257 6.7E-18 T 13-09-2016 IPR015168 SsuA/THI5-like PMA3_RS18790 64e9ddcb9fa5f55fe914b077baa7eaf6 369 PANTHER PTHR30024:SF1 14 295 1.7E-27 T 13-09-2016 PMA3_RS18790 64e9ddcb9fa5f55fe914b077baa7eaf6 369 PANTHER PTHR30024 14 295 1.7E-27 T 13-09-2016 PMA3_RS18790 64e9ddcb9fa5f55fe914b077baa7eaf6 369 SUPERFAMILY SSF53850 31 261 8.41E-39 T 13-09-2016 PMA3_RS20080 84ba8b04ac61d8066c8e49e5825112df 288 PANTHER PTHR13903:SF12 1 286 1.7E-162 T 13-09-2016 PMA3_RS20080 84ba8b04ac61d8066c8e49e5825112df 288 SUPERFAMILY SSF51182 2 286 2.52E-87 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS20080 84ba8b04ac61d8066c8e49e5825112df 288 Pfam PF02678 Pirin 22 127 2.1E-33 T 13-09-2016 IPR003829 Pirin, N-terminal domain PMA3_RS20080 84ba8b04ac61d8066c8e49e5825112df 288 Gene3D G3DSA:2.60.120.10 11 257 6.2E-79 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS20080 84ba8b04ac61d8066c8e49e5825112df 288 PANTHER PTHR13903 1 286 1.7E-162 T 13-09-2016 IPR012093 Pirin PMA3_RS20080 84ba8b04ac61d8066c8e49e5825112df 288 PIRSF PIRSF006232 2 288 4.0E-90 T 13-09-2016 IPR012093 Pirin PMA3_RS20080 84ba8b04ac61d8066c8e49e5825112df 288 Pfam PF05726 Pirin C-terminal cupin domain 182 284 1.3E-30 T 13-09-2016 IPR008778 Pirin, C-terminal domain PMA3_RS06345 07b45cdc0382dee065f506fdaca5ada1 165 Gene3D G3DSA:1.10.10.10 5 146 2.2E-31 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06345 07b45cdc0382dee065f506fdaca5ada1 165 SUPERFAMILY SSF46785 9 146 1.87E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06345 07b45cdc0382dee065f506fdaca5ada1 165 SMART SM00347 33 133 7.7E-22 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS06345 07b45cdc0382dee065f506fdaca5ada1 165 Pfam PF01047 MarR family 41 98 5.1E-14 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS06345 07b45cdc0382dee065f506fdaca5ada1 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 5.2E-10 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS06345 07b45cdc0382dee065f506fdaca5ada1 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 5.2E-10 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS06345 07b45cdc0382dee065f506fdaca5ada1 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 5.2E-10 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS06345 07b45cdc0382dee065f506fdaca5ada1 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 106 - T 13-09-2016 IPR023187 Transcriptional regulator MarR-type, conserved site PMA3_RS06345 07b45cdc0382dee065f506fdaca5ada1 165 PANTHER PTHR33164 38 156 2.9E-23 T 13-09-2016 PMA3_RS20030 eb92a0e7d5bc21cd5a8783cf3bfa4ef8 378 SUPERFAMILY SSF103473 5 369 4.32E-45 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS20030 eb92a0e7d5bc21cd5a8783cf3bfa4ef8 378 Gene3D G3DSA:1.20.1250.20 6 185 3.9E-23 T 13-09-2016 PMA3_RS20030 eb92a0e7d5bc21cd5a8783cf3bfa4ef8 378 PANTHER PTHR23502:SF19 4 340 1.3E-47 T 13-09-2016 PMA3_RS20030 eb92a0e7d5bc21cd5a8783cf3bfa4ef8 378 Pfam PF07690 Major Facilitator Superfamily 19 340 1.8E-27 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS20030 eb92a0e7d5bc21cd5a8783cf3bfa4ef8 378 Gene3D G3DSA:1.20.1250.20 206 370 7.3E-4 T 13-09-2016 PMA3_RS20030 eb92a0e7d5bc21cd5a8783cf3bfa4ef8 378 PANTHER PTHR23502 4 340 1.3E-47 T 13-09-2016 PMA3_RS17165 b3ef0e512cbc50fb524cc5626ad2b050 502 PANTHER PTHR35342 2 488 5.6E-274 T 13-09-2016 PMA3_RS17165 b3ef0e512cbc50fb524cc5626ad2b050 502 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 441 2.3E-144 T 13-09-2016 IPR002823 Protein of unknown function DUF112, transmembrane PMA3_RS17165 b3ef0e512cbc50fb524cc5626ad2b050 502 PANTHER PTHR35342:SF3 2 488 5.6E-274 T 13-09-2016 PMA3_RS21930 dd39a64833154966fcc63ba36725271c 188 PANTHER PTHR23026:SF107 1 170 3.8E-66 T 13-09-2016 PMA3_RS21930 dd39a64833154966fcc63ba36725271c 188 PANTHER PTHR23026 1 170 3.8E-66 T 13-09-2016 PMA3_RS21930 dd39a64833154966fcc63ba36725271c 188 PIRSF PIRSF000232 1 187 9.8E-66 T 13-09-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- PMA3_RS21930 dd39a64833154966fcc63ba36725271c 188 SUPERFAMILY SSF55469 1 182 3.01E-43 T 13-09-2016 IPR000415 Nitroreductase-like GO:0016491 PMA3_RS21930 dd39a64833154966fcc63ba36725271c 188 Gene3D G3DSA:3.40.109.10 1 183 2.2E-42 T 13-09-2016 IPR000415 Nitroreductase-like GO:0016491 PMA3_RS21930 dd39a64833154966fcc63ba36725271c 188 Pfam PF00881 Nitroreductase family 9 163 1.2E-23 T 13-09-2016 IPR029479 Nitroreductase PMA3_RS17830 ae5cc183e1aad03566711043968b0d88 281 Gene3D G3DSA:1.10.10.60 167 224 3.8E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17830 ae5cc183e1aad03566711043968b0d88 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 172 216 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS17830 ae5cc183e1aad03566711043968b0d88 281 PANTHER PTHR11019 38 277 2.2E-38 T 13-09-2016 PMA3_RS17830 ae5cc183e1aad03566711043968b0d88 281 Pfam PF12833 Helix-turn-helix domain 193 270 3.6E-18 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17830 ae5cc183e1aad03566711043968b0d88 281 SUPERFAMILY SSF46689 223 271 2.82E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17830 ae5cc183e1aad03566711043968b0d88 281 Pfam PF12852 Cupin 2 155 6.3E-26 T 13-09-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain PMA3_RS17830 ae5cc183e1aad03566711043968b0d88 281 PANTHER PTHR11019:SF77 38 277 2.2E-38 T 13-09-2016 PMA3_RS17830 ae5cc183e1aad03566711043968b0d88 281 Gene3D G3DSA:1.10.10.60 225 271 8.9E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17830 ae5cc183e1aad03566711043968b0d88 281 SUPERFAMILY SSF46689 170 220 4.35E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17830 ae5cc183e1aad03566711043968b0d88 281 SMART SM00342 187 269 1.8E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 SUPERFAMILY SSF51735 2 200 4.77E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 7.9E-29 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 7.9E-29 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 7.9E-29 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.9E-29 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 7.9E-29 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PANTHER PTHR24322:SF320 143 174 2.5E-44 T 13-09-2016 PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PANTHER PTHR24322:SF320 6 127 2.5E-44 T 13-09-2016 PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 Pfam PF00106 short chain dehydrogenase 3 185 1.4E-45 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 4.5E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 4.5E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 4.5E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 Gene3D G3DSA:3.40.50.720 3 235 6.1E-60 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PANTHER PTHR24322 143 174 2.5E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24690 f5a9ffd0db36979825c949529b500f0e 274 PANTHER PTHR24322 6 127 2.5E-44 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS03375 092c1bb08977ee6417ac77df3f7ef8e2 310 Gene3D G3DSA:1.10.10.10 4 82 2.7E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03375 092c1bb08977ee6417ac77df3f7ef8e2 310 PANTHER PTHR30126:SF26 1 306 5.1E-125 T 13-09-2016 PMA3_RS03375 092c1bb08977ee6417ac77df3f7ef8e2 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.3E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS03375 092c1bb08977ee6417ac77df3f7ef8e2 310 Gene3D G3DSA:3.40.190.10 178 260 3.8E-18 T 13-09-2016 PMA3_RS03375 092c1bb08977ee6417ac77df3f7ef8e2 310 Gene3D G3DSA:3.40.190.10 92 177 2.7E-14 T 13-09-2016 PMA3_RS03375 092c1bb08977ee6417ac77df3f7ef8e2 310 SUPERFAMILY SSF53850 90 297 1.99E-36 T 13-09-2016 PMA3_RS03375 092c1bb08977ee6417ac77df3f7ef8e2 310 SUPERFAMILY SSF46785 4 85 2.27E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03375 092c1bb08977ee6417ac77df3f7ef8e2 310 Pfam PF03466 LysR substrate binding domain 90 292 7.3E-37 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS03375 092c1bb08977ee6417ac77df3f7ef8e2 310 PANTHER PTHR30126 1 306 5.1E-125 T 13-09-2016 PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 Pfam PF08521 Two-component sensor kinase N-terminal 20 149 3.9E-8 T 13-09-2016 IPR013727 Two-component sensor kinase, N-terminal PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 442 8.2E-11 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 SMART SM00304 174 226 0.0084 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 Gene3D G3DSA:1.20.5.1040 6 57 1.6E-8 T 13-09-2016 PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 SUPERFAMILY SSF55874 294 441 4.71E-22 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 SUPERFAMILY SSF47384 210 293 3.73E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 Pfam PF00672 HAMP domain 156 222 3.9E-7 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 Gene3D G3DSA:3.30.565.10 307 444 1.1E-20 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 SMART SM00388 227 292 5.2E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 292 2.0E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 SMART SM00387 335 443 4.9E-21 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 Gene3D G3DSA:1.10.287.130 218 288 2.9E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 PANTHER PTHR24423 168 444 3.0E-38 T 13-09-2016 PMA3_RS13580 6a33ff040008d0a9a78292d1e2685a0a 447 PANTHER PTHR24423:SF474 168 444 3.0E-38 T 13-09-2016 PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 SUPERFAMILY SSF51735 1 247 2.97E-82 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 186 9.4E-4 T 13-09-2016 PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PANTHER PTHR24322 11 139 3.4E-61 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PANTHER PTHR24322 155 187 3.4E-61 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 3.6E-64 T 13-09-2016 PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.2E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-15 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 Gene3D G3DSA:3.40.50.720 1 244 4.9E-87 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.4E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.4E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.4E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14655 18801d5d76532efc551e03d8fcd77b6e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.4E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS25095 ba86fb047ad7158a886b3a649521fd0a 182 Pfam PF03968 OstA-like protein 35 147 6.3E-22 T 13-09-2016 IPR005653 Organic solvent tolerance-like, N-terminal PMA3_RS25095 ba86fb047ad7158a886b3a649521fd0a 182 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 4 173 23.877 T 13-09-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 PMA3_RS25095 ba86fb047ad7158a886b3a649521fd0a 182 PANTHER PTHR36504 1 180 1.1E-34 T 13-09-2016 PMA3_RS25095 ba86fb047ad7158a886b3a649521fd0a 182 Gene3D G3DSA:2.60.450.10 25 159 3.7E-29 T 13-09-2016 PMA3_RS25095 ba86fb047ad7158a886b3a649521fd0a 182 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 24 173 2.1E-41 T 13-09-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 PMA3_RS08240 1c7cb1e3538318fc63cd327a24bae322 374 Gene3D G3DSA:3.40.50.300 75 191 4.0E-15 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08240 1c7cb1e3538318fc63cd327a24bae322 374 PANTHER PTHR12169 80 371 5.7E-106 T 13-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 PMA3_RS08240 1c7cb1e3538318fc63cd327a24bae322 374 SUPERFAMILY SSF52540 75 192 2.83E-10 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08240 1c7cb1e3538318fc63cd327a24bae322 374 Pfam PF03969 AFG1-like ATPase 75 367 1.4E-94 T 13-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 PMA3_RS08240 1c7cb1e3538318fc63cd327a24bae322 374 PANTHER PTHR12169:SF11 80 371 5.7E-106 T 13-09-2016 PMA3_RS20990 0eb5931b447381f4371fd84b1d2ac13a 232 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 6 231 38.462 T 13-09-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 PMA3_RS20990 0eb5931b447381f4371fd84b1d2ac13a 232 PANTHER PTHR10108:SF910 2 228 8.8E-143 T 13-09-2016 PMA3_RS20990 0eb5931b447381f4371fd84b1d2ac13a 232 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 225 2.2E-88 T 13-09-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 PMA3_RS20990 0eb5931b447381f4371fd84b1d2ac13a 232 PANTHER PTHR10108 2 228 8.8E-143 T 13-09-2016 PMA3_RS20990 0eb5931b447381f4371fd84b1d2ac13a 232 Gene3D G3DSA:3.40.50.150 19 216 6.7E-47 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS20990 0eb5931b447381f4371fd84b1d2ac13a 232 Pfam PF13489 Methyltransferase domain 47 199 2.1E-23 T 13-09-2016 PMA3_RS20990 0eb5931b447381f4371fd84b1d2ac13a 232 SUPERFAMILY SSF53335 12 225 4.8E-49 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS16485 b1db1164a99f81a4b1aca83813bca846 190 Gene3D G3DSA:3.30.1330.80 55 189 1.7E-21 T 13-09-2016 PMA3_RS16485 b1db1164a99f81a4b1aca83813bca846 190 Pfam PF03479 Domain of unknown function (DUF296) 63 169 1.3E-8 T 13-09-2016 IPR005175 PPC domain PMA3_RS16485 b1db1164a99f81a4b1aca83813bca846 190 PANTHER PTHR34988 33 190 1.3E-13 T 13-09-2016 PMA3_RS16485 b1db1164a99f81a4b1aca83813bca846 190 SUPERFAMILY SSF117856 55 187 1.01E-19 T 13-09-2016 PMA3_RS07775 bd10ea84bded139b96f1ca1858ad0afb 245 PANTHER PTHR34108 4 245 5.7E-67 T 13-09-2016 PMA3_RS07775 bd10ea84bded139b96f1ca1858ad0afb 245 Gene3D G3DSA:2.160.20.70 123 243 8.3E-38 T 13-09-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 PMA3_RS07775 bd10ea84bded139b96f1ca1858ad0afb 245 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 141 241 1.3E-29 T 13-09-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 PMA3_RS07775 bd10ea84bded139b96f1ca1858ad0afb 245 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 12 244 26.423 T 13-09-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 PMA3_RS07775 bd10ea84bded139b96f1ca1858ad0afb 245 SUPERFAMILY SSF63848 139 242 8.37E-30 T 13-09-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 PMA3_RS07775 bd10ea84bded139b96f1ca1858ad0afb 245 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 7 112 9.9E-25 T 13-09-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 PMA3_RS07775 bd10ea84bded139b96f1ca1858ad0afb 245 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 245 3.3E-82 T 13-09-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 PMA3_RS07775 bd10ea84bded139b96f1ca1858ad0afb 245 PANTHER PTHR34108:SF1 4 245 5.7E-67 T 13-09-2016 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 Pfam PF01025 GrpE 14 174 2.3E-51 T 13-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 ProSitePatterns PS01071 grpE protein signature. 129 172 - T 13-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 PRINTS PR00773 GrpE protein signature 153 172 1.2E-25 T 13-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 PRINTS PR00773 GrpE protein signature 126 141 1.2E-25 T 13-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 PRINTS PR00773 GrpE protein signature 43 59 1.2E-25 T 13-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 PRINTS PR00773 GrpE protein signature 71 86 1.2E-25 T 13-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 Gene3D G3DSA:3.90.20.20 18 116 1.6E-30 T 13-09-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 Hamap MF_01151 Protein GrpE [grpE]. 2 174 20.658 T 13-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 Gene3D G3DSA:2.30.22.10 119 175 9.1E-27 T 13-09-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 SUPERFAMILY SSF58014 22 116 5.36E-27 T 13-09-2016 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 PANTHER PTHR21237 1 177 3.5E-61 T 13-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PMA3_RS25585 19087c2ff3f652fd5717695a55012c0e 187 SUPERFAMILY SSF51064 119 175 1.44E-18 T 13-09-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 PMA3_RS24785 0ee069908ac03e403d085ff9cc11710a 458 Pfam PF03315 Serine dehydratase beta chain 4 154 5.7E-58 T 13-09-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PMA3_RS24785 0ee069908ac03e403d085ff9cc11710a 458 PANTHER PTHR30182:SF1 1 456 7.7E-234 T 13-09-2016 PMA3_RS24785 0ee069908ac03e403d085ff9cc11710a 458 SUPERFAMILY SSF143548 17 155 4.18E-46 T 13-09-2016 IPR029009 Allosteric substrate binding domain PMA3_RS24785 0ee069908ac03e403d085ff9cc11710a 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 453 1.2E-210 T 13-09-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PMA3_RS24785 0ee069908ac03e403d085ff9cc11710a 458 PANTHER PTHR30182 1 456 7.7E-234 T 13-09-2016 PMA3_RS24785 0ee069908ac03e403d085ff9cc11710a 458 Gene3D G3DSA:3.30.1330.90 11 156 3.6E-54 T 13-09-2016 IPR029009 Allosteric substrate binding domain PMA3_RS24785 0ee069908ac03e403d085ff9cc11710a 458 Pfam PF03313 Serine dehydratase alpha chain 186 452 1.3E-102 T 13-09-2016 IPR005130 Serine dehydratase-like, alpha subunit PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 SUPERFAMILY SSF46785 17 100 1.41E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 Gene3D G3DSA:3.40.190.10 107 205 9.3E-24 T 13-09-2016 PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 4.6E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 4.6E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 4.6E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 SUPERFAMILY SSF53850 106 308 3.26E-35 T 13-09-2016 PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 79 1.2E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 Gene3D G3DSA:1.10.10.10 21 102 8.7E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 PANTHER PTHR30537 12 308 2.9E-73 T 13-09-2016 PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 Pfam PF03466 LysR substrate binding domain 103 308 2.0E-30 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS10050 13015d7340b7026a77d43e8efc50c644 321 PANTHER PTHR30537:SF26 12 308 2.9E-73 T 13-09-2016 PMA3_RS21025 0bd500206b001a6edbe42d1075eb16d7 179 Gene3D G3DSA:1.10.10.60 10 58 1.2E-19 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21025 0bd500206b001a6edbe42d1075eb16d7 179 SUPERFAMILY SSF48498 81 177 5.56E-6 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS21025 0bd500206b001a6edbe42d1075eb16d7 179 PANTHER PTHR30055 3 177 2.1E-31 T 13-09-2016 PMA3_RS21025 0bd500206b001a6edbe42d1075eb16d7 179 PANTHER PTHR30055:SF67 3 177 2.1E-31 T 13-09-2016 PMA3_RS21025 0bd500206b001a6edbe42d1075eb16d7 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 64 4.7E-7 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS21025 0bd500206b001a6edbe42d1075eb16d7 179 SUPERFAMILY SSF46689 11 71 4.64E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21025 0bd500206b001a6edbe42d1075eb16d7 179 Gene3D G3DSA:1.10.357.10 61 177 1.0E-10 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 Pfam PF02954 Bacterial regulatory protein, Fis family 398 438 4.4E-10 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 Gene3D G3DSA:3.40.50.300 145 318 1.0E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 SUPERFAMILY SSF52172 3 191 7.54E-43 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 Gene3D G3DSA:1.10.10.60 385 440 1.8E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 SUPERFAMILY SSF52540 146 375 1.84E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 SMART SM00382 166 313 3.0E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 Pfam PF00072 Response regulator receiver domain 7 115 4.3E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 SUPERFAMILY SSF46689 357 440 4.48E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 PANTHER PTHR32071 4 440 2.0E-249 T 13-09-2016 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 404 421 6.9E-10 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 421 441 6.9E-10 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 SMART SM00448 5 116 2.0E-30 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 Gene3D G3DSA:1.10.8.60 319 375 1.8E-20 T 13-09-2016 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 Pfam PF00158 Sigma-54 interaction domain 146 312 5.4E-68 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 Gene3D G3DSA:3.40.50.2300 3 128 1.2E-34 T 13-09-2016 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 PANTHER PTHR32071:SF11 4 440 2.0E-249 T 13-09-2016 PMA3_RS23865 9930da1f63245961e1e1aedc340a4233 442 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 Pfam PF05048 Periplasmic copper-binding protein (NosD) 141 381 1.5E-65 T 13-09-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 159 199 1.3E-8 T 13-09-2016 IPR022441 Parallel beta-helix repeat-2 PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00722 191 365 4.1E-28 T 13-09-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00722 49 185 9.9E-22 T 13-09-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 38 418 4.2E-136 T 13-09-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 Gene3D G3DSA:2.160.20.10 77 371 8.8E-11 T 13-09-2016 IPR012334 Pectin lyase fold PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SUPERFAMILY SSF51126 37 406 1.01E-53 T 13-09-2016 IPR011050 Pectin lyase fold/virulence factor PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00710 231 253 1200.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00710 209 230 2600.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00710 83 111 5900.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00710 113 134 53.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00710 290 311 100.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00710 254 289 8200.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00710 187 208 750.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00710 135 164 1600.0 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS16390 f61c2023f9723bdef765bb639e0f7764 430 SMART SM00710 165 186 3.8 T 13-09-2016 IPR006626 Parallel beta-helix repeat PMA3_RS15345 1428a4b613193a0002a23e3bebbbc012 115 PANTHER PTHR33154:SF4 9 100 2.0E-25 T 13-09-2016 PMA3_RS15345 1428a4b613193a0002a23e3bebbbc012 115 PANTHER PTHR33154 9 100 2.0E-25 T 13-09-2016 PMA3_RS15345 1428a4b613193a0002a23e3bebbbc012 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.2E-22 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS15345 1428a4b613193a0002a23e3bebbbc012 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 42 1.2E-22 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS15345 1428a4b613193a0002a23e3bebbbc012 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 1.2E-22 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS15345 1428a4b613193a0002a23e3bebbbc012 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.2E-22 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS15345 1428a4b613193a0002a23e3bebbbc012 115 Gene3D G3DSA:1.10.10.10 7 91 4.8E-31 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15345 1428a4b613193a0002a23e3bebbbc012 115 Pfam PF01022 Bacterial regulatory protein, arsR family 16 62 2.7E-14 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS15345 1428a4b613193a0002a23e3bebbbc012 115 SMART SM00418 9 91 1.1E-29 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS15345 1428a4b613193a0002a23e3bebbbc012 115 SUPERFAMILY SSF46785 6 103 1.53E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07740 83befd3390d5e18512432b369626a364 445 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 46 427 7.8E-97 T 13-09-2016 IPR017439 Amidohydrolase GO:0016787 PMA3_RS07740 83befd3390d5e18512432b369626a364 445 PANTHER PTHR11014:SF63 36 443 3.4E-138 T 13-09-2016 PMA3_RS07740 83befd3390d5e18512432b369626a364 445 PANTHER PTHR11014 36 443 3.4E-138 T 13-09-2016 PMA3_RS07740 83befd3390d5e18512432b369626a364 445 PIRSF PIRSF005962 30 442 2.4E-114 T 13-09-2016 IPR017439 Amidohydrolase GO:0016787 PMA3_RS07740 83befd3390d5e18512432b369626a364 445 SUPERFAMILY SSF53187 33 247 7.71E-82 T 13-09-2016 PMA3_RS07740 83befd3390d5e18512432b369626a364 445 SUPERFAMILY SSF53187 349 441 7.71E-82 T 13-09-2016 PMA3_RS07740 83befd3390d5e18512432b369626a364 445 Pfam PF01546 Peptidase family M20/M25/M40 103 435 1.6E-30 T 13-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PMA3_RS07740 83befd3390d5e18512432b369626a364 445 Gene3D G3DSA:3.30.70.360 231 348 5.7E-34 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS07740 83befd3390d5e18512432b369626a364 445 Gene3D G3DSA:3.40.630.10 349 440 1.4E-99 T 13-09-2016 PMA3_RS07740 83befd3390d5e18512432b369626a364 445 Gene3D G3DSA:3.40.630.10 30 228 1.4E-99 T 13-09-2016 PMA3_RS07740 83befd3390d5e18512432b369626a364 445 Pfam PF07687 Peptidase dimerisation domain 236 333 6.3E-10 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS07740 83befd3390d5e18512432b369626a364 445 SUPERFAMILY SSF55031 234 341 2.36E-26 T 13-09-2016 IPR011650 Peptidase M20, dimerisation domain PMA3_RS26615 d40308900c49fb565cee6eb20760c9c8 231 PANTHER PTHR10429 12 229 5.3E-47 T 13-09-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 PMA3_RS26615 d40308900c49fb565cee6eb20760c9c8 231 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 19 213 23.201 T 13-09-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 PMA3_RS26615 d40308900c49fb565cee6eb20760c9c8 231 Gene3D G3DSA:3.10.300.10 16 219 1.4E-41 T 13-09-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 PMA3_RS26615 d40308900c49fb565cee6eb20760c9c8 231 PANTHER PTHR10429:SF0 12 229 5.3E-47 T 13-09-2016 PMA3_RS26615 d40308900c49fb565cee6eb20760c9c8 231 SUPERFAMILY SSF50486 16 220 9.42E-52 T 13-09-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 PMA3_RS26615 d40308900c49fb565cee6eb20760c9c8 231 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 21 205 6.2E-34 T 13-09-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 PMA3_RS25160 baccb4e7864c6fcbe0ae1d94869469ae 174 PANTHER PTHR38101 5 174 1.1E-67 T 13-09-2016 PMA3_RS25160 baccb4e7864c6fcbe0ae1d94869469ae 174 Pfam PF04751 Protein of unknown function (DUF615) 13 164 3.7E-52 T 13-09-2016 IPR006839 Ribosome-associated, YjgA PMA3_RS25160 baccb4e7864c6fcbe0ae1d94869469ae 174 Gene3D G3DSA:1.10.60.30 100 170 1.2E-29 T 13-09-2016 IPR023153 PSPTO4464-like domain PMA3_RS25160 baccb4e7864c6fcbe0ae1d94869469ae 174 PANTHER PTHR38101:SF1 5 174 1.1E-67 T 13-09-2016 PMA3_RS25160 baccb4e7864c6fcbe0ae1d94869469ae 174 Gene3D G3DSA:1.10.60.30 24 98 5.5E-25 T 13-09-2016 IPR023153 PSPTO4464-like domain PMA3_RS25160 baccb4e7864c6fcbe0ae1d94869469ae 174 PIRSF PIRSF016183 2 172 4.0E-64 T 13-09-2016 IPR006839 Ribosome-associated, YjgA PMA3_RS25160 baccb4e7864c6fcbe0ae1d94869469ae 174 SUPERFAMILY SSF158710 24 166 2.75E-48 T 13-09-2016 PMA3_RS25160 baccb4e7864c6fcbe0ae1d94869469ae 174 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 168 21.139 T 13-09-2016 IPR006839 Ribosome-associated, YjgA PMA3_RS21825 22bac58ca2aba7212782ffb782cde7ff 261 Gene3D G3DSA:1.10.800.10 3 245 3.7E-95 T 13-09-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 PMA3_RS21825 22bac58ca2aba7212782ffb782cde7ff 261 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 74 96 1.1E-9 T 13-09-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PMA3_RS21825 22bac58ca2aba7212782ffb782cde7ff 261 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 209 228 1.1E-9 T 13-09-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PMA3_RS21825 22bac58ca2aba7212782ffb782cde7ff 261 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 178 196 1.1E-9 T 13-09-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PMA3_RS21825 22bac58ca2aba7212782ffb782cde7ff 261 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 138 157 1.1E-9 T 13-09-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PMA3_RS21825 22bac58ca2aba7212782ffb782cde7ff 261 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 117 128 - T 13-09-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 PMA3_RS21825 22bac58ca2aba7212782ffb782cde7ff 261 PANTHER PTHR11473 9 228 2.6E-92 T 13-09-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 PMA3_RS21825 22bac58ca2aba7212782ffb782cde7ff 261 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 11 254 1.0E-126 T 13-09-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 PMA3_RS21825 22bac58ca2aba7212782ffb782cde7ff 261 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 15 230 1.4E-47 T 13-09-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PMA3_RS21825 22bac58ca2aba7212782ffb782cde7ff 261 SUPERFAMILY SSF56534 3 247 6.8E-103 T 13-09-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PMA3_RS19820 b0b9d046c9cf4e5be6f01d5d563d00b5 167 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 164 1.3E-44 T 13-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PMA3_RS19820 b0b9d046c9cf4e5be6f01d5d563d00b5 167 PIRSF PIRSF001467 1 167 4.3E-24 T 13-09-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PMA3_RS19820 b0b9d046c9cf4e5be6f01d5d563d00b5 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 1.2E-9 T 13-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PMA3_RS19820 b0b9d046c9cf4e5be6f01d5d563d00b5 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 1.2E-9 T 13-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PMA3_RS19820 b0b9d046c9cf4e5be6f01d5d563d00b5 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 1.2E-9 T 13-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PMA3_RS19820 b0b9d046c9cf4e5be6f01d5d563d00b5 167 PANTHER PTHR11071 5 167 2.1E-70 T 13-09-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PMA3_RS19820 b0b9d046c9cf4e5be6f01d5d563d00b5 167 PANTHER PTHR11071:SF192 5 167 2.1E-70 T 13-09-2016 PMA3_RS19820 b0b9d046c9cf4e5be6f01d5d563d00b5 167 Gene3D G3DSA:2.40.100.10 3 166 1.5E-49 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS19820 b0b9d046c9cf4e5be6f01d5d563d00b5 167 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 13-09-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PMA3_RS19820 b0b9d046c9cf4e5be6f01d5d563d00b5 167 SUPERFAMILY SSF50891 4 166 1.01E-52 T 13-09-2016 IPR029000 Cyclophilin-like domain PMA3_RS09020 eb42251b095df35f601ee155db6ed5aa 214 Gene3D G3DSA:3.20.19.10 1 203 4.2E-51 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS09020 eb42251b095df35f601ee155db6ed5aa 214 PANTHER PTHR11670:SF27 1 208 1.5E-110 T 13-09-2016 PMA3_RS09020 eb42251b095df35f601ee155db6ed5aa 214 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.984 T 13-09-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09020 eb42251b095df35f601ee155db6ed5aa 214 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 2.1E-90 T 13-09-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09020 eb42251b095df35f601ee155db6ed5aa 214 PANTHER PTHR11670 1 208 1.5E-110 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09020 eb42251b095df35f601ee155db6ed5aa 214 SUPERFAMILY SSF52016 1 203 8.44E-61 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS09020 eb42251b095df35f601ee155db6ed5aa 214 Pfam PF00694 Aconitase C-terminal domain 1 131 1.3E-38 T 13-09-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS30325 d809d3928b119075b3cfef10a3253ce4 537 SUPERFAMILY SSF141868 280 524 1.57E-71 T 13-09-2016 IPR001633 EAL domain PMA3_RS30325 d809d3928b119075b3cfef10a3253ce4 537 Gene3D G3DSA:3.20.20.450 277 524 2.5E-76 T 13-09-2016 IPR001633 EAL domain PMA3_RS30325 d809d3928b119075b3cfef10a3253ce4 537 PANTHER PTHR33121 247 524 6.3E-93 T 13-09-2016 PMA3_RS30325 d809d3928b119075b3cfef10a3253ce4 537 Pfam PF00563 EAL domain 280 511 1.2E-60 T 13-09-2016 IPR001633 EAL domain PMA3_RS30325 d809d3928b119075b3cfef10a3253ce4 537 PANTHER PTHR33121:SF16 247 524 6.3E-93 T 13-09-2016 PMA3_RS30325 d809d3928b119075b3cfef10a3253ce4 537 SMART SM00052 273 517 1.1E-82 T 13-09-2016 IPR001633 EAL domain PMA3_RS30325 d809d3928b119075b3cfef10a3253ce4 537 Pfam PF12792 CSS motif domain associated with EAL 47 242 2.3E-27 T 13-09-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PMA3_RS15130 74a3651a31db24f6f725cf7237d43f9a 326 SUPERFAMILY SSF53850 114 320 1.12E-15 T 13-09-2016 PMA3_RS15130 74a3651a31db24f6f725cf7237d43f9a 326 SUPERFAMILY SSF46785 34 103 3.74E-9 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15130 74a3651a31db24f6f725cf7237d43f9a 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 37 92 1.9E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS15130 74a3651a31db24f6f725cf7237d43f9a 326 Pfam PF03466 LysR substrate binding domain 115 317 4.2E-11 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS15130 74a3651a31db24f6f725cf7237d43f9a 326 PANTHER PTHR30346 40 324 2.3E-21 T 13-09-2016 PMA3_RS15130 74a3651a31db24f6f725cf7237d43f9a 326 Gene3D G3DSA:1.10.10.10 33 99 4.0E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15130 74a3651a31db24f6f725cf7237d43f9a 326 PANTHER PTHR30346:SF15 40 324 2.3E-21 T 13-09-2016 PMA3_RS16425 d66dff0ef28aeb1926e46815458ad9c9 125 SUPERFAMILY SSF50022 17 124 9.0E-33 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS16425 d66dff0ef28aeb1926e46815458ad9c9 125 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 18 123 1.1E-30 T 13-09-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PMA3_RS16425 d66dff0ef28aeb1926e46815458ad9c9 125 PANTHER PTHR40562 10 125 2.9E-27 T 13-09-2016 PMA3_RS16425 d66dff0ef28aeb1926e46815458ad9c9 125 Gene3D G3DSA:2.102.10.10 17 124 3.2E-38 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS16425 d66dff0ef28aeb1926e46815458ad9c9 125 Pfam PF13806 Rieske-like [2Fe-2S] domain 18 122 6.3E-37 T 13-09-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PMA3_RS13470 5c1d85ade46cf4fff7732b248f3f8f58 473 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 464 1.5E-105 T 13-09-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PMA3_RS13470 5c1d85ade46cf4fff7732b248f3f8f58 473 Gene3D G3DSA:1.20.1600.10 56 469 2.1E-104 T 13-09-2016 PMA3_RS13470 5c1d85ade46cf4fff7732b248f3f8f58 473 Pfam PF02321 Outer membrane efflux protein 283 462 3.2E-19 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS13470 5c1d85ade46cf4fff7732b248f3f8f58 473 Pfam PF02321 Outer membrane efflux protein 65 253 4.3E-23 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS13470 5c1d85ade46cf4fff7732b248f3f8f58 473 PANTHER PTHR30203:SF13 10 467 2.2E-180 T 13-09-2016 PMA3_RS13470 5c1d85ade46cf4fff7732b248f3f8f58 473 SUPERFAMILY SSF56954 3 31 6.28E-102 T 13-09-2016 PMA3_RS13470 5c1d85ade46cf4fff7732b248f3f8f58 473 SUPERFAMILY SSF56954 56 467 6.28E-102 T 13-09-2016 PMA3_RS13470 5c1d85ade46cf4fff7732b248f3f8f58 473 PANTHER PTHR30203 10 467 2.2E-180 T 13-09-2016 PMA3_RS11665 6ef78661493badeb0232fbd9fa024c1f 460 Gene3D G3DSA:2.50.20.10 166 314 1.3E-35 T 13-09-2016 PMA3_RS11665 6ef78661493badeb0232fbd9fa024c1f 460 Gene3D G3DSA:2.50.20.10 347 448 1.3E-35 T 13-09-2016 PMA3_RS11665 6ef78661493badeb0232fbd9fa024c1f 460 Pfam PF07044 Protein of unknown function (DUF1329) 91 454 6.5E-117 T 13-09-2016 IPR010752 Protein of unknown function DUF1329 PMA3_RS28190 0e72766a70ff6af4fe48f39612201414 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 6.7E-210 T 13-09-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 PMA3_RS28190 0e72766a70ff6af4fe48f39612201414 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 13-09-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PMA3_RS28190 0e72766a70ff6af4fe48f39612201414 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 1.8E-91 T 13-09-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PMA3_RS28190 0e72766a70ff6af4fe48f39612201414 354 PANTHER PTHR30304 1 349 7.3E-122 T 13-09-2016 PMA3_RS28190 0e72766a70ff6af4fe48f39612201414 354 SUPERFAMILY SSF51569 3 328 4.54E-106 T 13-09-2016 PMA3_RS28190 0e72766a70ff6af4fe48f39612201414 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 13-09-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PMA3_RS28190 0e72766a70ff6af4fe48f39612201414 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 9.4E-96 T 13-09-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PMA3_RS28190 0e72766a70ff6af4fe48f39612201414 354 Gene3D G3DSA:3.20.20.70 1 335 1.6E-108 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS28190 0e72766a70ff6af4fe48f39612201414 354 PIRSF PIRSF001359 1 329 3.9E-82 T 13-09-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PMA3_RS04460 7c9a57e6feac47dd0211f3c12b2fa2a5 83 Gene3D G3DSA:3.30.1320.10 1 78 3.3E-30 T 13-09-2016 IPR023803 Ribosomal protein S16 domain PMA3_RS04460 7c9a57e6feac47dd0211f3c12b2fa2a5 83 SUPERFAMILY SSF54565 1 77 3.66E-27 T 13-09-2016 IPR023803 Ribosomal protein S16 domain PMA3_RS04460 7c9a57e6feac47dd0211f3c12b2fa2a5 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 9.9E-26 T 13-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04460 7c9a57e6feac47dd0211f3c12b2fa2a5 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 21.813 T 13-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04460 7c9a57e6feac47dd0211f3c12b2fa2a5 83 Pfam PF00886 Ribosomal protein S16 10 68 2.4E-23 T 13-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS04460 7c9a57e6feac47dd0211f3c12b2fa2a5 83 PANTHER PTHR12919 1 78 1.4E-35 T 13-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27255 4d5db01f8d04b48d1a46274d65e0e7f9 99 SUPERFAMILY SSF54189 1 91 3.6E-29 T 13-09-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27255 4d5db01f8d04b48d1a46274d65e0e7f9 99 Pfam PF00276 Ribosomal protein L23 8 94 7.1E-30 T 13-09-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27255 4d5db01f8d04b48d1a46274d65e0e7f9 99 Gene3D G3DSA:3.30.70.330 5 96 8.0E-32 T 13-09-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PMA3_RS27255 4d5db01f8d04b48d1a46274d65e0e7f9 99 PANTHER PTHR11620 7 94 6.6E-28 T 13-09-2016 PMA3_RS27255 4d5db01f8d04b48d1a46274d65e0e7f9 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 21.851 T 13-09-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PMA3_RS17950 d76296029bb825cfeb8413d4185c0465 229 PANTHER PTHR33204 1 159 2.7E-33 T 13-09-2016 PMA3_RS17950 d76296029bb825cfeb8413d4185c0465 229 SUPERFAMILY SSF55718 131 215 4.32E-10 T 13-09-2016 IPR003033 SCP2 sterol-binding domain PMA3_RS17950 d76296029bb825cfeb8413d4185c0465 229 SUPERFAMILY SSF46785 5 107 3.42E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17950 d76296029bb825cfeb8413d4185c0465 229 PANTHER PTHR33204:SF9 1 159 2.7E-33 T 13-09-2016 PMA3_RS17950 d76296029bb825cfeb8413d4185c0465 229 Pfam PF01638 HxlR-like helix-turn-helix 18 101 1.4E-23 T 13-09-2016 IPR002577 Helix-turn-helix, HxlR type PMA3_RS17950 d76296029bb825cfeb8413d4185c0465 229 Gene3D G3DSA:1.10.10.10 3 100 5.0E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26140 ee62b4c869e132301e811213a5daa16c 212 SUPERFAMILY SSF89562 18 173 5.1E-36 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS26140 ee62b4c869e132301e811213a5daa16c 212 Pfam PF03737 Demethylmenaquinone methyltransferase 34 166 4.4E-32 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS26140 ee62b4c869e132301e811213a5daa16c 212 PANTHER PTHR33254 32 212 1.1E-37 T 13-09-2016 PMA3_RS26140 ee62b4c869e132301e811213a5daa16c 212 PANTHER PTHR33254:SF5 32 212 1.1E-37 T 13-09-2016 PMA3_RS26140 ee62b4c869e132301e811213a5daa16c 212 Gene3D G3DSA:3.50.30.40 31 172 1.4E-36 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS11240 d3ef1744c1847e7ca8bbb3013e3c56ab 187 Pfam PF00293 NUDIX domain 45 154 1.3E-17 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS11240 d3ef1744c1847e7ca8bbb3013e3c56ab 187 Pfam PF14803 Nudix N-terminal 6 38 3.0E-13 T 13-09-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- PMA3_RS11240 d3ef1744c1847e7ca8bbb3013e3c56ab 187 ProSitePatterns PS00893 Nudix box signature. 74 95 - T 13-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PMA3_RS11240 d3ef1744c1847e7ca8bbb3013e3c56ab 187 PANTHER PTHR22769 6 169 5.1E-48 T 13-09-2016 PMA3_RS11240 d3ef1744c1847e7ca8bbb3013e3c56ab 187 Gene3D G3DSA:3.90.79.10 40 167 4.4E-35 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS11240 d3ef1744c1847e7ca8bbb3013e3c56ab 187 Gene3D G3DSA:2.20.70.10 5 38 2.8E-13 T 13-09-2016 PMA3_RS11240 d3ef1744c1847e7ca8bbb3013e3c56ab 187 SUPERFAMILY SSF55811 6 166 2.71E-41 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS11240 d3ef1744c1847e7ca8bbb3013e3c56ab 187 PANTHER PTHR22769:SF17 6 169 5.1E-48 T 13-09-2016 PMA3_RS11240 d3ef1744c1847e7ca8bbb3013e3c56ab 187 PRINTS PR00502 NUDIX hydrolase family signature 83 98 9.9E-8 T 13-09-2016 IPR020476 NUDIX hydrolase PMA3_RS11240 d3ef1744c1847e7ca8bbb3013e3c56ab 187 PRINTS PR00502 NUDIX hydrolase family signature 69 83 9.9E-8 T 13-09-2016 IPR020476 NUDIX hydrolase PMA3_RS11370 aab36549c0d9ced635036785f228bbc9 371 SUPERFAMILY SSF101478 65 355 2.35E-73 T 13-09-2016 IPR005502 ADP-ribosylation/Crystallin J1 PMA3_RS11370 aab36549c0d9ced635036785f228bbc9 371 Pfam PF03747 ADP-ribosylglycohydrolase 70 335 7.9E-61 T 13-09-2016 IPR005502 ADP-ribosylation/Crystallin J1 PMA3_RS11370 aab36549c0d9ced635036785f228bbc9 371 PANTHER PTHR16222:SF12 38 357 1.7E-56 T 13-09-2016 PMA3_RS11370 aab36549c0d9ced635036785f228bbc9 371 PANTHER PTHR16222 38 357 1.7E-56 T 13-09-2016 PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 9.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 9.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 9.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 9.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 9.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 252 2.4E-60 T 13-09-2016 PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 Gene3D G3DSA:3.40.50.720 6 252 5.2E-78 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 7.8E-14 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 7.8E-14 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 7.8E-14 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PANTHER PTHR24322 10 134 7.4E-51 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 PANTHER PTHR24322 150 181 7.4E-51 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18750 7bf9d9025eed8adfcf42830c70af7a67 252 SUPERFAMILY SSF51735 6 252 6.54E-76 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08965 01d57ecb45facc125c6078bf6a6e4e42 310 Pfam PF01148 Cytidylyltransferase family 43 306 1.4E-68 T 13-09-2016 PMA3_RS08965 01d57ecb45facc125c6078bf6a6e4e42 310 PANTHER PTHR13773 1 307 4.2E-130 T 13-09-2016 PMA3_RS08965 01d57ecb45facc125c6078bf6a6e4e42 310 PANTHER PTHR13773:SF11 1 307 4.2E-130 T 13-09-2016 PMA3_RS08430 0ce5096a1e4e31e0f45f0582f7d7a486 279 SUPERFAMILY SSF53448 2 270 6.98E-65 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS08430 0ce5096a1e4e31e0f45f0582f7d7a486 279 Gene3D G3DSA:3.90.550.10 2 267 1.9E-65 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS08430 0ce5096a1e4e31e0f45f0582f7d7a486 279 Pfam PF00483 Nucleotidyl transferase 9 267 1.4E-30 T 13-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PMA3_RS08430 0ce5096a1e4e31e0f45f0582f7d7a486 279 PANTHER PTHR22572:SF14 4 277 9.7E-101 T 13-09-2016 PMA3_RS08430 0ce5096a1e4e31e0f45f0582f7d7a486 279 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 264 4.2E-121 T 13-09-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 PMA3_RS08430 0ce5096a1e4e31e0f45f0582f7d7a486 279 PANTHER PTHR22572 4 277 9.7E-101 T 13-09-2016 PMA3_RS13285 8a8b6343e71c6f9db59858e4c5d76233 119 SUPERFAMILY SSF142906 6 118 9.42E-28 T 13-09-2016 PMA3_RS13285 8a8b6343e71c6f9db59858e4c5d76233 119 PANTHER PTHR35145 6 119 7.3E-26 T 13-09-2016 PMA3_RS13285 8a8b6343e71c6f9db59858e4c5d76233 119 Pfam PF04237 YjbR 16 104 6.7E-14 T 13-09-2016 IPR007351 Uncharacterised protein YjbR PMA3_RS21430 eaf963095ad8f152dcf4638bb2e8fa4b 269 SUPERFAMILY SSF52540 9 265 1.47E-58 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21430 eaf963095ad8f152dcf4638bb2e8fa4b 269 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS21430 eaf963095ad8f152dcf4638bb2e8fa4b 269 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 15 267 7.4E-115 T 13-09-2016 IPR012700 Phosphonate C-P lyase system, PhnK PMA3_RS21430 eaf963095ad8f152dcf4638bb2e8fa4b 269 SMART SM00382 42 240 4.0E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS21430 eaf963095ad8f152dcf4638bb2e8fa4b 269 Gene3D G3DSA:3.40.50.300 15 266 1.7E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21430 eaf963095ad8f152dcf4638bb2e8fa4b 269 PIRSF PIRSF037116 5 269 1.3E-141 T 13-09-2016 IPR012700 Phosphonate C-P lyase system, PhnK PMA3_RS21430 eaf963095ad8f152dcf4638bb2e8fa4b 269 PANTHER PTHR24220:SF554 19 269 1.4E-133 T 13-09-2016 PMA3_RS21430 eaf963095ad8f152dcf4638bb2e8fa4b 269 PANTHER PTHR24220 19 269 1.4E-133 T 13-09-2016 PMA3_RS21430 eaf963095ad8f152dcf4638bb2e8fa4b 269 Pfam PF00005 ABC transporter 34 190 6.8E-28 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 SUPERFAMILY SSF53155 189 273 1.41E-13 T 13-09-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 Gene3D G3DSA:3.30.160.70 189 266 1.9E-5 T 13-09-2016 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 PANTHER PTHR10815 158 353 5.0E-60 T 13-09-2016 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 Pfam PF02805 Metal binding domain of Ada 14 76 4.0E-28 T 13-09-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 PIRSF PIRSF000409 1 357 1.7E-140 T 13-09-2016 IPR016221 Bifunctional regulatory protein Ada PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 13-09-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 Gene3D G3DSA:1.10.10.60 138 181 8.0E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 192 265 2.7E-5 T 13-09-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 Gene3D G3DSA:1.10.10.60 113 137 1.5E-5 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 Pfam PF12833 Helix-turn-helix domain 111 180 4.7E-17 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 SUPERFAMILY SSF57884 9 90 4.97E-31 T 13-09-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 SUPERFAMILY SSF46767 268 350 2.75E-29 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 SUPERFAMILY SSF46689 137 182 1.12E-5 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 SMART SM00342 101 182 4.9E-13 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 349 3.9E-30 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 PANTHER PTHR10815:SF5 158 353 5.0E-60 T 13-09-2016 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 187 351 34.955 T 13-09-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 Gene3D G3DSA:1.10.10.10 268 353 4.4E-31 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 Gene3D G3DSA:3.40.10.10 11 89 2.7E-31 T 13-09-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PMA3_RS15475 1ad9f63c81b640abee7565aca8a0ba1e 360 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 270 348 2.3E-31 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS11220 de2eca2bf2b8e36610545d597054e296 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 303 1.5E-9 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS11220 de2eca2bf2b8e36610545d597054e296 314 SUPERFAMILY SSF161098 40 302 1.83E-53 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS11220 de2eca2bf2b8e36610545d597054e296 314 Gene3D G3DSA:1.10.3720.10 39 299 4.3E-50 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS11220 de2eca2bf2b8e36610545d597054e296 314 PANTHER PTHR30193 48 314 1.3E-83 T 13-09-2016 PMA3_RS11220 de2eca2bf2b8e36610545d597054e296 314 PANTHER PTHR30193:SF8 48 314 1.3E-83 T 13-09-2016 PMA3_RS20245 5afbe4d129ff4ed90abe57c776cce3e2 372 TIGRFAM TIGR03907 QH_beta: quinohemoprotein amine dehydrogenase, beta subunit 34 372 3.1E-162 T 13-09-2016 IPR023879 Quinohemoprotein amine dehydrogenase, beta subunit PMA3_RS20245 5afbe4d129ff4ed90abe57c776cce3e2 372 Gene3D G3DSA:2.130.10.10 30 366 3.2E-50 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS20245 5afbe4d129ff4ed90abe57c776cce3e2 372 SUPERFAMILY SSF50969 32 366 9.42E-48 T 13-09-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PMA3_RS06845 a8d92ae6886c4a2cd9e570624a194125 110 SUPERFAMILY SSF103481 6 106 2.62E-7 T 13-09-2016 PMA3_RS06845 a8d92ae6886c4a2cd9e570624a194125 110 PANTHER PTHR36116:SF1 1 106 1.9E-44 T 13-09-2016 PMA3_RS06845 a8d92ae6886c4a2cd9e570624a194125 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 106 9.9E-29 T 13-09-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 PMA3_RS06845 a8d92ae6886c4a2cd9e570624a194125 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 106 22.946 T 13-09-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 PMA3_RS06845 a8d92ae6886c4a2cd9e570624a194125 110 PANTHER PTHR36116 1 106 1.9E-44 T 13-09-2016 PMA3_RS23025 35121a96fa2a9811e587ac02511fe26b 662 PANTHER PTHR30509:SF1 298 634 4.1E-136 T 13-09-2016 PMA3_RS23025 35121a96fa2a9811e587ac02511fe26b 662 PANTHER PTHR30509:SF1 8 249 4.1E-136 T 13-09-2016 PMA3_RS23025 35121a96fa2a9811e587ac02511fe26b 662 PANTHER PTHR30509 298 634 4.1E-136 T 13-09-2016 PMA3_RS23025 35121a96fa2a9811e587ac02511fe26b 662 Pfam PF04632 Fusaric acid resistance protein family 16 654 1.9E-194 T 13-09-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PMA3_RS23025 35121a96fa2a9811e587ac02511fe26b 662 PANTHER PTHR30509 8 249 4.1E-136 T 13-09-2016 PMA3_RS00435 737fcd8bbe66ae807672c83a6196d9f5 690 Pfam PF04632 Fusaric acid resistance protein family 13 668 4.3E-188 T 13-09-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PMA3_RS00435 737fcd8bbe66ae807672c83a6196d9f5 690 PANTHER PTHR30509 315 648 4.1E-81 T 13-09-2016 PMA3_RS00435 737fcd8bbe66ae807672c83a6196d9f5 690 PANTHER PTHR30509:SF1 315 648 4.1E-81 T 13-09-2016 PMA3_RS00435 737fcd8bbe66ae807672c83a6196d9f5 690 PANTHER PTHR30509:SF1 8 253 4.1E-81 T 13-09-2016 PMA3_RS00435 737fcd8bbe66ae807672c83a6196d9f5 690 PANTHER PTHR30509 8 253 4.1E-81 T 13-09-2016 PMA3_RS18880 a7c99c6e45e97a39fddb2eee8440ef14 321 Gene3D G3DSA:3.10.180.10 5 118 8.3E-8 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS18880 a7c99c6e45e97a39fddb2eee8440ef14 321 Gene3D G3DSA:3.10.180.10 152 285 3.2E-35 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS18880 a7c99c6e45e97a39fddb2eee8440ef14 321 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 265 1.6E-14 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS18880 a7c99c6e45e97a39fddb2eee8440ef14 321 SUPERFAMILY SSF54593 1 278 3.51E-31 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 3.0E-61 T 13-09-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 PANTHER PTHR11374 1 444 3.4E-243 T 13-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 8.1E-36 T 13-09-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 SUPERFAMILY SSF51735 1 195 3.72E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 PIRSF PIRSF000124 1 439 9.3E-140 T 13-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 Gene3D G3DSA:3.40.50.720 1 206 2.4E-73 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 PANTHER PTHR11374:SF18 1 444 3.4E-243 T 13-09-2016 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 SUPERFAMILY SSF48179 204 301 4.19E-32 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 SUPERFAMILY SSF52413 311 435 4.45E-38 T 13-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 1.7E-131 T 13-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 Gene3D G3DSA:1.20.5.100 207 233 7.2E-18 T 13-09-2016 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 SMART SM00984 320 424 1.1E-45 T 13-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 Gene3D G3DSA:3.40.50.720 235 443 3.5E-72 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 PIRSF PIRSF500134 1 442 3.1E-179 T 13-09-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 PMA3_RS14770 c54240f91100cbc20597d051caec2e8d 459 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 423 9.9E-29 T 13-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PMA3_RS20920 cc97042f5a4774a48e423c29995e8c41 372 Gene3D G3DSA:3.90.25.10 207 364 8.4E-58 T 13-09-2016 PMA3_RS20920 cc97042f5a4774a48e423c29995e8c41 372 Pfam PF16363 GDP-mannose 4,6 dehydratase 20 340 9.2E-100 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20920 cc97042f5a4774a48e423c29995e8c41 372 PANTHER PTHR10366 18 367 9.2E-186 T 13-09-2016 PMA3_RS20920 cc97042f5a4774a48e423c29995e8c41 372 PANTHER PTHR10366:SF41 18 367 9.2E-186 T 13-09-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PMA3_RS20920 cc97042f5a4774a48e423c29995e8c41 372 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 18 353 4.4E-155 T 13-09-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PMA3_RS20920 cc97042f5a4774a48e423c29995e8c41 372 Gene3D G3DSA:3.40.50.720 18 206 7.3E-66 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20920 cc97042f5a4774a48e423c29995e8c41 372 SUPERFAMILY SSF51735 17 366 4.15E-93 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 Pfam PF01494 FAD binding domain 10 172 8.0E-6 T 13-09-2016 IPR002938 FAD-binding domain GO:0071949 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 Pfam PF01494 FAD binding domain 304 371 6.5E-10 T 13-09-2016 IPR002938 FAD-binding domain GO:0071949 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 Gene3D G3DSA:3.50.50.60 293 380 8.0E-33 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 Gene3D G3DSA:3.50.50.60 10 184 8.0E-33 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 PANTHER PTHR13789:SF215 4 419 7.4E-112 T 13-09-2016 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 SUPERFAMILY SSF54373 184 297 1.26E-13 T 13-09-2016 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 SUPERFAMILY SSF51905 9 175 1.3E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 SUPERFAMILY SSF51905 293 388 1.3E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 TIGRFAM TIGR03219 salicylate_mono: salicylate 1-monooxygenase 8 420 8.2E-227 T 13-09-2016 IPR017631 Salicylate 1-monooxygenase KEGG: 00621+1.14.13.1|KEGG: 00624+1.14.13.1|KEGG: 00626+1.14.13.1|MetaCyc: PWY-6107|MetaCyc: PWY-6183|MetaCyc: PWY-6184|UniPathway: UPA00082 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 PANTHER PTHR13789 4 419 7.4E-112 T 13-09-2016 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 6.1E-21 T 13-09-2016 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 321 6.1E-21 T 13-09-2016 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 6.1E-21 T 13-09-2016 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 358 374 6.1E-21 T 13-09-2016 PMA3_RS14245 cbd513e0e274060224b482bc7c9e8def 427 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 321 337 6.1E-21 T 13-09-2016 PMA3_RS16455 0d18fbcd771bccd8260b94615a7f574a 347 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 319 8.1E-71 T 13-09-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PMA3_RS16455 0d18fbcd771bccd8260b94615a7f574a 347 PANTHER PTHR33376 8 347 2.4E-112 T 13-09-2016 PMA3_RS16455 0d18fbcd771bccd8260b94615a7f574a 347 PIRSF PIRSF006470 13 344 3.0E-68 T 13-09-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PMA3_RS16455 0d18fbcd771bccd8260b94615a7f574a 347 PANTHER PTHR33376:SF4 8 347 2.4E-112 T 13-09-2016 PMA3_RS16455 0d18fbcd771bccd8260b94615a7f574a 347 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 50 295 1.8E-66 T 13-09-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PMA3_RS02395 7328b7ba068e4bdbc1816b01a469923c 177 SUPERFAMILY SSF55729 5 173 2.06E-27 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS02395 7328b7ba068e4bdbc1816b01a469923c 177 Pfam PF13673 Acetyltransferase (GNAT) domain 51 151 2.8E-11 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS02395 7328b7ba068e4bdbc1816b01a469923c 177 Gene3D G3DSA:3.40.630.30 4 174 1.0E-35 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS02395 7328b7ba068e4bdbc1816b01a469923c 177 PANTHER PTHR23091:SF243 1 158 2.6E-17 T 13-09-2016 PMA3_RS02395 7328b7ba068e4bdbc1816b01a469923c 177 PANTHER PTHR23091 1 158 2.6E-17 T 13-09-2016 PMA3_RS06855 6cfcc23dcb6066dee30ba1e5c570673a 75 PIRSF PIRSF006169 1 75 1.4E-30 T 13-09-2016 IPR010648 Uncharacterised protein family UPF0270 PMA3_RS06855 6cfcc23dcb6066dee30ba1e5c570673a 75 SUPERFAMILY SSF118001 1 72 2.09E-26 T 13-09-2016 IPR010648 Uncharacterised protein family UPF0270 PMA3_RS06855 6cfcc23dcb6066dee30ba1e5c570673a 75 Gene3D G3DSA:1.10.10.610 1 72 3.5E-29 T 13-09-2016 IPR010648 Uncharacterised protein family UPF0270 PMA3_RS06855 6cfcc23dcb6066dee30ba1e5c570673a 75 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 9.6E-26 T 13-09-2016 IPR010648 Uncharacterised protein family UPF0270 PMA3_RS06855 6cfcc23dcb6066dee30ba1e5c570673a 75 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 66 2.0E-30 T 13-09-2016 IPR010648 Uncharacterised protein family UPF0270 PMA3_RS06855 6cfcc23dcb6066dee30ba1e5c570673a 75 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 69 22.992 T 13-09-2016 IPR010648 Uncharacterised protein family UPF0270 PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.7E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 Gene3D G3DSA:1.10.10.10 1 87 9.2E-30 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 SUPERFAMILY SSF46785 5 89 9.52E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.4E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.4E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.4E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 Gene3D G3DSA:3.40.190.10 177 272 6.6E-23 T 13-09-2016 PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 PANTHER PTHR30118 1 305 4.4E-62 T 13-09-2016 PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 Pfam PF03466 LysR substrate binding domain 100 301 5.2E-18 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 Gene3D G3DSA:3.40.190.10 100 176 3.9E-9 T 13-09-2016 PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 Gene3D G3DSA:3.40.190.10 276 302 3.9E-9 T 13-09-2016 PMA3_RS13135 0be0bf77dbdc092c84dc37ae952dd01d 305 SUPERFAMILY SSF53850 100 298 1.14E-29 T 13-09-2016 PMA3_RS18775 9fd35608ff6b60fce98a51a4eb665b53 254 SMART SM00382 37 230 4.9E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS18775 9fd35608ff6b60fce98a51a4eb665b53 254 SUPERFAMILY SSF52540 6 241 1.02E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18775 9fd35608ff6b60fce98a51a4eb665b53 254 Gene3D G3DSA:3.40.50.300 4 220 6.4E-65 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18775 9fd35608ff6b60fce98a51a4eb665b53 254 PANTHER PTHR24220:SF589 7 246 2.1E-89 T 13-09-2016 PMA3_RS18775 9fd35608ff6b60fce98a51a4eb665b53 254 PANTHER PTHR24220 7 246 2.1E-89 T 13-09-2016 PMA3_RS18775 9fd35608ff6b60fce98a51a4eb665b53 254 Pfam PF00005 ABC transporter 28 167 4.6E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS18775 9fd35608ff6b60fce98a51a4eb665b53 254 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS23220 7534e4be376d0d0835a2bb331cb630d8 215 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 212 35.149 T 13-09-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 PMA3_RS23220 7534e4be376d0d0835a2bb331cb630d8 215 Pfam PF13394 4Fe-4S single cluster domain 26 108 3.5E-10 T 13-09-2016 PMA3_RS23220 7534e4be376d0d0835a2bb331cb630d8 215 Pfam PF04055 Radical SAM superfamily 28 115 2.3E-15 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS23220 7534e4be376d0d0835a2bb331cb630d8 215 SUPERFAMILY SSF102114 27 109 1.57E-14 T 13-09-2016 PMA3_RS23220 7534e4be376d0d0835a2bb331cb630d8 215 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 5 215 2.1E-109 T 13-09-2016 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE PMA3_RS23220 7534e4be376d0d0835a2bb331cb630d8 215 PANTHER PTHR11228:SF6 1 209 8.9E-67 T 13-09-2016 PMA3_RS23220 7534e4be376d0d0835a2bb331cb630d8 215 PANTHER PTHR11228 1 209 8.9E-67 T 13-09-2016 PMA3_RS23220 7534e4be376d0d0835a2bb331cb630d8 215 PIRSF PIRSF000370 3 215 2.5E-67 T 13-09-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 PMA3_RS23220 7534e4be376d0d0835a2bb331cb630d8 215 Gene3D G3DSA:3.20.20.70 31 105 1.3E-13 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS21190 e8567298c00a73c953e3c90aad8cdc16 138 PANTHER PTHR39624:SF2 1 133 5.9E-28 T 13-09-2016 PMA3_RS21190 e8567298c00a73c953e3c90aad8cdc16 138 Gene3D G3DSA:3.30.300.20 2 131 3.3E-39 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS21190 e8567298c00a73c953e3c90aad8cdc16 138 Pfam PF02566 OsmC-like protein 34 129 1.8E-19 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS21190 e8567298c00a73c953e3c90aad8cdc16 138 PANTHER PTHR39624 1 133 5.9E-28 T 13-09-2016 PMA3_RS21190 e8567298c00a73c953e3c90aad8cdc16 138 SUPERFAMILY SSF82784 1 130 1.3E-31 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 Pfam PF00072 Response regulator receiver domain 4 109 9.2E-22 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 Gene3D G3DSA:3.40.50.2300 1 121 4.7E-31 T 13-09-2016 PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 Gene3D G3DSA:1.10.8.60 321 390 3.7E-22 T 13-09-2016 PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 SMART SM00448 2 109 5.8E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 PANTHER PTHR32071:SF18 1 478 2.4E-220 T 13-09-2016 PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 Gene3D G3DSA:3.40.50.300 147 320 1.4E-60 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 Pfam PF00158 Sigma-54 interaction domain 148 314 1.0E-72 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 SUPERFAMILY SSF52540 147 389 8.37E-73 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 SUPERFAMILY SSF52172 1 193 1.71E-38 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 PANTHER PTHR32071 1 478 2.4E-220 T 13-09-2016 PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 SMART SM00382 168 318 8.9E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS03475 aab9aca844b799d6250acf88ed277b1a 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS23710 ec45ac0b17f185baf8fedd71ade589f7 336 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 81 92 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS23710 ec45ac0b17f185baf8fedd71ade589f7 336 Pfam PF04060 Putative Fe-S cluster 11 42 1.9E-12 T 13-09-2016 IPR007202 4Fe-4S domain GO:0051536 PMA3_RS23710 ec45ac0b17f185baf8fedd71ade589f7 336 PANTHER PTHR11938:SF64 3 130 2.6E-59 T 13-09-2016 PMA3_RS23710 ec45ac0b17f185baf8fedd71ade589f7 336 PANTHER PTHR11938 3 130 2.6E-59 T 13-09-2016 PMA3_RS23710 ec45ac0b17f185baf8fedd71ade589f7 336 Gene3D G3DSA:3.30.70.20 70 129 4.5E-14 T 13-09-2016 PMA3_RS23710 ec45ac0b17f185baf8fedd71ade589f7 336 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 132 3.5E-64 T 13-09-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 PMA3_RS23710 ec45ac0b17f185baf8fedd71ade589f7 336 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 111 122 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS23710 ec45ac0b17f185baf8fedd71ade589f7 336 Pfam PF14697 4Fe-4S dicluster domain 74 128 6.9E-17 T 13-09-2016 PMA3_RS23710 ec45ac0b17f185baf8fedd71ade589f7 336 SUPERFAMILY SSF54862 5 132 3.54E-26 T 13-09-2016 PMA3_RS29885 cee4022ab2dcda5a74b9b12b1d0eb957 322 SUPERFAMILY SSF52540 4 174 2.02E-22 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29885 cee4022ab2dcda5a74b9b12b1d0eb957 322 Gene3D G3DSA:3.40.50.300 4 195 1.1E-37 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29885 cee4022ab2dcda5a74b9b12b1d0eb957 322 PANTHER PTHR13748 1 320 2.4E-41 T 13-09-2016 PMA3_RS29885 cee4022ab2dcda5a74b9b12b1d0eb957 322 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 169 9.0E-36 T 13-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS23905 3c2e594d9ae5eaf07c37fd93670f6f17 459 Gene3D G3DSA:3.40.50.2300 13 140 8.2E-36 T 13-09-2016 PMA3_RS23905 3c2e594d9ae5eaf07c37fd93670f6f17 459 SMART SM00448 13 125 9.5E-28 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23905 3c2e594d9ae5eaf07c37fd93670f6f17 459 PANTHER PTHR26402 13 367 9.3E-56 T 13-09-2016 PMA3_RS23905 3c2e594d9ae5eaf07c37fd93670f6f17 459 SUPERFAMILY SSF109604 215 375 8.79E-11 T 13-09-2016 PMA3_RS23905 3c2e594d9ae5eaf07c37fd93670f6f17 459 SUPERFAMILY SSF52172 11 177 5.98E-38 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS23905 3c2e594d9ae5eaf07c37fd93670f6f17 459 Pfam PF13487 HD domain 260 320 3.1E-18 T 13-09-2016 PMA3_RS23905 3c2e594d9ae5eaf07c37fd93670f6f17 459 Pfam PF00072 Response regulator receiver domain 15 123 1.0E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23905 3c2e594d9ae5eaf07c37fd93670f6f17 459 PANTHER PTHR26402:SF515 13 367 9.3E-56 T 13-09-2016 PMA3_RS03495 edb3d1f3a75bca2554baa689819c6524 390 Gene3D G3DSA:3.40.640.10 47 269 1.1E-59 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS03495 edb3d1f3a75bca2554baa689819c6524 390 Pfam PF00155 Aminotransferase class I and II 33 381 3.4E-51 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS03495 edb3d1f3a75bca2554baa689819c6524 390 Gene3D G3DSA:3.90.1150.10 270 387 2.6E-27 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS03495 edb3d1f3a75bca2554baa689819c6524 390 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 13-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PMA3_RS03495 edb3d1f3a75bca2554baa689819c6524 390 PANTHER PTHR11751:SF401 14 386 5.8E-199 T 13-09-2016 PMA3_RS03495 edb3d1f3a75bca2554baa689819c6524 390 SUPERFAMILY SSF53383 6 387 7.84E-95 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS03495 edb3d1f3a75bca2554baa689819c6524 390 PANTHER PTHR11751 14 386 5.8E-199 T 13-09-2016 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 PANTHER PTHR11669 1 370 4.9E-182 T 13-09-2016 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 573 691 1.9E-15 T 13-09-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 PANTHER PTHR11669 407 450 4.9E-182 T 13-09-2016 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 SMART SM00382 37 179 1.3E-7 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 PANTHER PTHR11669:SF0 407 450 4.9E-182 T 13-09-2016 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 SUPERFAMILY SSF48019 243 364 1.62E-33 T 13-09-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 PANTHER PTHR11669:SF0 1 370 4.9E-182 T 13-09-2016 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 2.5E-131 T 13-09-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 Gene3D G3DSA:3.40.50.300 16 166 2.6E-67 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 SUPERFAMILY SSF52540 30 221 5.26E-58 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 1.1E-32 T 13-09-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 3.9E-5 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 3.9E-5 T 13-09-2016 IPR001270 ClpA/B family GO:0005524 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 Gene3D G3DSA:1.20.272.10 243 360 4.9E-46 T 13-09-2016 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 Gene3D G3DSA:1.10.8.60 167 242 1.6E-31 T 13-09-2016 PMA3_RS20290 816ee06f6493ae31db76c2e8712eef90 701 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.9E-44 T 13-09-2016 PMA3_RS12605 f6d00a040b5474c167ef7b14d2b020f8 477 Gene3D G3DSA:1.10.760.10 301 477 8.7E-15 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12605 f6d00a040b5474c167ef7b14d2b020f8 477 SUPERFAMILY SSF46626 458 477 5.9E-20 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12605 f6d00a040b5474c167ef7b14d2b020f8 477 SUPERFAMILY SSF46626 301 413 5.9E-20 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS21460 c64f66b0ec6bc726df2f81549190b388 260 SUPERFAMILY SSF161098 64 254 5.76E-35 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS21460 c64f66b0ec6bc726df2f81549190b388 260 PANTHER PTHR30043:SF1 11 260 5.3E-117 T 13-09-2016 PMA3_RS21460 c64f66b0ec6bc726df2f81549190b388 260 Gene3D G3DSA:1.10.3720.10 63 259 6.8E-31 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS21460 c64f66b0ec6bc726df2f81549190b388 260 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 21 259 2.2E-93 T 13-09-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 PMA3_RS21460 c64f66b0ec6bc726df2f81549190b388 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 258 2.7E-18 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS21460 c64f66b0ec6bc726df2f81549190b388 260 PANTHER PTHR30043 11 260 5.3E-117 T 13-09-2016 PMA3_RS04425 6c28cb697573c0c37dff99bc5e78f336 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 3.5E-10 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS04425 6c28cb697573c0c37dff99bc5e78f336 174 Gene3D G3DSA:2.160.10.10 3 167 3.4E-50 T 13-09-2016 PMA3_RS04425 6c28cb697573c0c37dff99bc5e78f336 174 PANTHER PTHR13061 13 171 8.7E-73 T 13-09-2016 PMA3_RS04425 6c28cb697573c0c37dff99bc5e78f336 174 SUPERFAMILY SSF51161 4 169 2.22E-49 T 13-09-2016 IPR011004 Trimeric LpxA-like PMA3_RS25020 7d0908aeb0058d9a8e47a1ee8508acd8 252 Gene3D G3DSA:3.40.1390.30 110 219 2.2E-29 T 13-09-2016 PMA3_RS25020 7d0908aeb0058d9a8e47a1ee8508acd8 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 251 1.5E-63 T 13-09-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PMA3_RS25020 7d0908aeb0058d9a8e47a1ee8508acd8 252 Gene3D G3DSA:3.40.1390.30 5 109 1.1E-35 T 13-09-2016 PMA3_RS25020 7d0908aeb0058d9a8e47a1ee8508acd8 252 PANTHER PTHR13799 4 247 5.2E-76 T 13-09-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PMA3_RS25020 7d0908aeb0058d9a8e47a1ee8508acd8 252 SUPERFAMILY SSF102705 5 251 2.09E-78 T 13-09-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PMA3_RS25020 7d0908aeb0058d9a8e47a1ee8508acd8 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 11 240 2.0E-56 T 13-09-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PMA3_RS28025 2c0f2d6cf118dadf47e5a14e64f4ee02 325 PANTHER PTHR10443:SF24 276 323 1.7E-179 T 13-09-2016 PMA3_RS28025 2c0f2d6cf118dadf47e5a14e64f4ee02 325 PANTHER PTHR10443 9 251 1.7E-179 T 13-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PMA3_RS28025 2c0f2d6cf118dadf47e5a14e64f4ee02 325 PANTHER PTHR10443:SF24 9 251 1.7E-179 T 13-09-2016 PMA3_RS28025 2c0f2d6cf118dadf47e5a14e64f4ee02 325 SUPERFAMILY SSF51556 9 324 3.88E-82 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS28025 2c0f2d6cf118dadf47e5a14e64f4ee02 325 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 6 320 4.6E-94 T 13-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PMA3_RS28025 2c0f2d6cf118dadf47e5a14e64f4ee02 325 Gene3D G3DSA:3.20.20.140 5 324 1.4E-95 T 13-09-2016 PMA3_RS28025 2c0f2d6cf118dadf47e5a14e64f4ee02 325 PANTHER PTHR10443 276 323 1.7E-179 T 13-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 PANTHER PTHR22893:SF25 1 428 3.9E-101 T 13-09-2016 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 Gene3D G3DSA:3.50.50.60 480 616 2.5E-18 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 SUPERFAMILY SSF51905 363 675 1.23E-31 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 SUPERFAMILY SSF51395 1 371 6.02E-90 T 13-09-2016 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 PANTHER PTHR22893 1 428 3.9E-101 T 13-09-2016 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 387 479 9.7E-7 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 340 1.3E-47 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 Gene3D G3DSA:3.50.50.60 617 677 4.1E-22 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 Gene3D G3DSA:3.50.50.60 386 479 4.1E-22 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 412 7.1E-7 T 13-09-2016 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 471 485 7.1E-7 T 13-09-2016 PMA3_RS12695 85bb57cdc356820206ad39791c7a5095 678 Gene3D G3DSA:3.20.20.70 2 378 5.7E-96 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS09700 81d95747d1dffeea5bafb59cb6bde3bd 297 PANTHER PTHR30537:SF3 1 292 2.5E-55 T 13-09-2016 PMA3_RS09700 81d95747d1dffeea5bafb59cb6bde3bd 297 SUPERFAMILY SSF46785 4 114 2.14E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09700 81d95747d1dffeea5bafb59cb6bde3bd 297 Gene3D G3DSA:3.40.190.10 96 185 3.9E-15 T 13-09-2016 PMA3_RS09700 81d95747d1dffeea5bafb59cb6bde3bd 297 Gene3D G3DSA:1.10.10.10 3 83 2.6E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09700 81d95747d1dffeea5bafb59cb6bde3bd 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.5E-13 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09700 81d95747d1dffeea5bafb59cb6bde3bd 297 Pfam PF03466 LysR substrate binding domain 92 287 9.3E-31 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS09700 81d95747d1dffeea5bafb59cb6bde3bd 297 PANTHER PTHR30537 1 292 2.5E-55 T 13-09-2016 PMA3_RS09700 81d95747d1dffeea5bafb59cb6bde3bd 297 SUPERFAMILY SSF53850 92 290 8.14E-32 T 13-09-2016 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 PANTHER PTHR24423 1 21 2.3E-154 T 13-09-2016 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 SUPERFAMILY SSF52172 24 167 1.26E-6 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 SUPERFAMILY SSF55874 244 416 3.41E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 Gene3D G3DSA:3.30.565.10 253 414 4.8E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 Gene3D G3DSA:1.10.287.130 178 249 4.8E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 PANTHER PTHR24423 169 555 2.3E-154 T 13-09-2016 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 PANTHER PTHR24423:SF438 169 555 2.3E-154 T 13-09-2016 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 Pfam PF00512 His Kinase A (phospho-acceptor) domain 186 252 5.6E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 SUPERFAMILY SSF52172 437 555 1.99E-27 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 PANTHER PTHR24423:SF438 1 21 2.3E-154 T 13-09-2016 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 374 2.4E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 414 2.4E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 395 2.4E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 2.4E-14 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 SMART SM00388 185 253 2.0E-7 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 Pfam PF00072 Response regulator receiver domain 440 550 7.3E-18 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 SMART SM00387 294 417 8.8E-25 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 Gene3D G3DSA:3.40.50.2300 436 555 1.8E-30 T 13-09-2016 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 Gene3D G3DSA:3.40.50.2300 80 137 9.3E-6 T 13-09-2016 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 SUPERFAMILY SSF47384 173 251 1.0E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 SMART SM00448 438 550 7.7E-20 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13440 0804b84f1deee268354e06c44c066472 556 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 414 3.5E-17 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12715 b79d9aedbc2472142a88acb6be8a6e22 412 PANTHER PTHR12286 1 410 6.3E-100 T 13-09-2016 PMA3_RS12715 b79d9aedbc2472142a88acb6be8a6e22 412 PANTHER PTHR12286:SF6 1 410 6.3E-100 T 13-09-2016 PMA3_RS12715 b79d9aedbc2472142a88acb6be8a6e22 412 Gene3D G3DSA:3.40.50.720 3 199 1.9E-35 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS12715 b79d9aedbc2472142a88acb6be8a6e22 412 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 146 1.1E-31 T 13-09-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 PMA3_RS12715 b79d9aedbc2472142a88acb6be8a6e22 412 SUPERFAMILY SSF51735 2 160 7.87E-22 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS12715 b79d9aedbc2472142a88acb6be8a6e22 412 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 150 396 4.4E-21 T 13-09-2016 IPR032095 Saccharopine dehydrogenase, C-terminal PMA3_RS18515 c87619beaff37f05e477b4149043bcd5 290 Gene3D G3DSA:2.60.120.10 40 103 7.7E-6 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS18515 c87619beaff37f05e477b4149043bcd5 290 SUPERFAMILY SSF46689 241 286 4.48E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18515 c87619beaff37f05e477b4149043bcd5 290 PANTHER PTHR11019 9 285 1.7E-63 T 13-09-2016 PMA3_RS18515 c87619beaff37f05e477b4149043bcd5 290 SMART SM00342 202 285 3.1E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18515 c87619beaff37f05e477b4149043bcd5 290 PANTHER PTHR11019:SF45 9 285 1.7E-63 T 13-09-2016 PMA3_RS18515 c87619beaff37f05e477b4149043bcd5 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 4.9E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS18515 c87619beaff37f05e477b4149043bcd5 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 4.9E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS18515 c87619beaff37f05e477b4149043bcd5 290 Gene3D G3DSA:1.10.10.60 242 287 9.1E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18515 c87619beaff37f05e477b4149043bcd5 290 Pfam PF12833 Helix-turn-helix domain 208 285 4.0E-19 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18515 c87619beaff37f05e477b4149043bcd5 290 SUPERFAMILY SSF51182 40 130 7.56E-10 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 Gene3D G3DSA:2.60.40.1180 639 742 3.7E-38 T 13-09-2016 IPR013780 Glycosyl hydrolase, all-beta PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 SUPERFAMILY SSF81296 148 202 2.73E-11 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 135 217 1.6E-22 T 13-09-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 PIRSF PIRSF000463 18 743 1.6E-286 T 13-09-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 PANTHER PTHR10357:SF160 62 741 0.0 T 13-09-2016 PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 Gene3D G3DSA:3.20.20.80 255 628 1.2E-88 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 SUPERFAMILY SSF51445 190 632 2.69E-114 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 SUPERFAMILY SSF81296 27 124 1.12E-14 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 SMART SM00642 261 612 2.9E-6 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 SUPERFAMILY SSF51011 639 742 6.06E-35 T 13-09-2016 PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 Pfam PF00128 Alpha amylase, catalytic domain 291 362 3.5E-8 T 13-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 119 740 9.3E-277 T 13-09-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 Gene3D G3DSA:2.60.40.10 26 116 8.4E-11 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 Gene3D G3DSA:2.60.40.10 123 230 1.1E-37 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 PANTHER PTHR10357 62 741 0.0 T 13-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 111 742 44.658 T 13-09-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 PMA3_RS14965 0e2f435b39cfdfa5db9b9039d0261fbb 743 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 644 741 2.8E-23 T 13-09-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 PMA3_RS18490 9a04eafc03e7219c3e5abdad45a7da20 344 SMART SM00342 247 329 5.6E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18490 9a04eafc03e7219c3e5abdad45a7da20 344 Gene3D G3DSA:1.10.10.60 282 333 1.0E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18490 9a04eafc03e7219c3e5abdad45a7da20 344 Pfam PF12833 Helix-turn-helix domain 253 329 1.4E-18 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18490 9a04eafc03e7219c3e5abdad45a7da20 344 PANTHER PTHR11019 185 337 1.3E-21 T 13-09-2016 PMA3_RS18490 9a04eafc03e7219c3e5abdad45a7da20 344 PANTHER PTHR11019:SF52 185 337 1.3E-21 T 13-09-2016 PMA3_RS18490 9a04eafc03e7219c3e5abdad45a7da20 344 SUPERFAMILY SSF46689 282 333 2.54E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18490 9a04eafc03e7219c3e5abdad45a7da20 344 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 283 325 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS18490 9a04eafc03e7219c3e5abdad45a7da20 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 204 5.0E-39 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS14035 cd0f715d5b26982df112cb77af7c27d3 158 Pfam PF09722 Protein of unknown function (DUF2384) 106 155 2.6E-17 T 13-09-2016 IPR024467 Domain of unknown function DUF2384 PMA3_RS14035 cd0f715d5b26982df112cb77af7c27d3 158 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 41 158 3.9E-22 T 13-09-2016 IPR011979 Conserved hypothetical protein CHP02293 PMA3_RS11090 bb4e66037b58cdb66bdcec7fa45cbb8f 201 Pfam PF01381 Helix-turn-helix 21 75 3.8E-12 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS11090 bb4e66037b58cdb66bdcec7fa45cbb8f 201 Gene3D G3DSA:2.60.120.10 105 198 3.2E-23 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS11090 bb4e66037b58cdb66bdcec7fa45cbb8f 201 Pfam PF07883 Cupin domain 132 193 1.1E-10 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS11090 bb4e66037b58cdb66bdcec7fa45cbb8f 201 SUPERFAMILY SSF51182 60 197 1.02E-22 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS11090 bb4e66037b58cdb66bdcec7fa45cbb8f 201 SUPERFAMILY SSF47413 15 81 5.36E-15 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS11090 bb4e66037b58cdb66bdcec7fa45cbb8f 201 Gene3D G3DSA:1.10.260.40 13 82 1.6E-17 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS11090 bb4e66037b58cdb66bdcec7fa45cbb8f 201 PANTHER PTHR10245 1 196 7.2E-27 T 13-09-2016 PMA3_RS11090 bb4e66037b58cdb66bdcec7fa45cbb8f 201 SMART SM00530 20 75 5.2E-13 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS11090 bb4e66037b58cdb66bdcec7fa45cbb8f 201 PANTHER PTHR10245:SF9 1 196 7.2E-27 T 13-09-2016 PMA3_RS03145 711e6a19b1883e3c29369163f8258d88 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 90.93 T 13-09-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 PMA3_RS03145 711e6a19b1883e3c29369163f8258d88 162 PANTHER PTHR38596 1 162 4.8E-92 T 13-09-2016 PMA3_RS03145 711e6a19b1883e3c29369163f8258d88 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 4.0E-71 T 13-09-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria PMA3_RS03145 711e6a19b1883e3c29369163f8258d88 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 124 5.1E-35 T 13-09-2016 IPR005134 Uncharacterised protein family UPF0114 PMA3_RS03145 711e6a19b1883e3c29369163f8258d88 162 PANTHER PTHR38596:SF1 1 162 4.8E-92 T 13-09-2016 PMA3_RS04790 eca33f7b912dcdf2c3651e82ea665bd3 401 SUPERFAMILY SSF53383 7 398 1.21E-113 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS04790 eca33f7b912dcdf2c3651e82ea665bd3 401 Gene3D G3DSA:3.40.640.10 34 275 3.4E-78 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS04790 eca33f7b912dcdf2c3651e82ea665bd3 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 233 - T 13-09-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PMA3_RS04790 eca33f7b912dcdf2c3651e82ea665bd3 401 Gene3D G3DSA:3.90.1150.10 276 400 4.5E-43 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS04790 eca33f7b912dcdf2c3651e82ea665bd3 401 PANTHER PTHR11601:SF17 1 401 1.2E-151 T 13-09-2016 PMA3_RS04790 eca33f7b912dcdf2c3651e82ea665bd3 401 PANTHER PTHR11601 1 401 1.2E-151 T 13-09-2016 PMA3_RS04790 eca33f7b912dcdf2c3651e82ea665bd3 401 Pfam PF00266 Aminotransferase class-V 24 389 6.7E-137 T 13-09-2016 IPR000192 Aminotransferase class V domain PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 PANTHER PTHR11019 24 295 1.0E-62 T 13-09-2016 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 SMART SM00342 204 287 2.0E-22 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 Gene3D G3DSA:1.10.10.60 182 232 6.7E-5 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 SUPERFAMILY SSF46689 242 290 6.27E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 PANTHER PTHR11019:SF45 24 295 1.0E-62 T 13-09-2016 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 241 283 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 Gene3D G3DSA:1.10.10.60 240 289 1.4E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 Pfam PF02311 AraC-like ligand binding domain 37 116 1.3E-6 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 SUPERFAMILY SSF51215 36 171 9.55E-12 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 Pfam PF12833 Helix-turn-helix domain 210 289 3.7E-17 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 Gene3D G3DSA:2.60.120.280 32 172 9.6E-11 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 8.1E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS23560 6e0ef2741d55d031abe040bd3bc06b43 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 8.1E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS27090 4144f71d71894ef3bcfb6ee9db5f3fd0 224 Pfam PF10679 Protein of unknown function (DUF2491) 3 221 3.2E-55 T 13-09-2016 IPR019621 Protein of unknown function DUF2491 PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 Gene3D G3DSA:3.40.190.10 169 264 2.5E-30 T 13-09-2016 PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 Gene3D G3DSA:1.10.10.10 1 80 6.2E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 PANTHER PTHR30118:SF8 1 285 5.9E-97 T 13-09-2016 PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 Gene3D G3DSA:3.40.190.10 86 168 1.2E-22 T 13-09-2016 PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 Gene3D G3DSA:3.40.190.10 268 293 1.2E-22 T 13-09-2016 PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.6E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.6E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.6E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 SUPERFAMILY SSF53850 86 291 1.0E-41 T 13-09-2016 PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 59 2.6E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 SUPERFAMILY SSF46785 1 82 4.44E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 Pfam PF03466 LysR substrate binding domain 92 292 3.2E-24 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS26250 2979cd77102f1abc846a0126296141d9 296 PANTHER PTHR30118 1 285 5.9E-97 T 13-09-2016 PMA3_RS04070 fee818f9faadaf8472db3f44071b6af2 192 PANTHER PTHR34606 17 192 6.6E-70 T 13-09-2016 PMA3_RS04070 fee818f9faadaf8472db3f44071b6af2 192 PANTHER PTHR34606:SF4 17 192 6.6E-70 T 13-09-2016 PMA3_RS04070 fee818f9faadaf8472db3f44071b6af2 192 Pfam PF04972 BON domain 46 115 2.1E-11 T 13-09-2016 IPR007055 BON domain PMA3_RS04070 fee818f9faadaf8472db3f44071b6af2 192 Pfam PF04972 BON domain 125 190 6.4E-14 T 13-09-2016 IPR007055 BON domain PMA3_RS04070 fee818f9faadaf8472db3f44071b6af2 192 SMART SM00749 130 192 0.43 T 13-09-2016 IPR014004 Transport-associated and nodulation domain, bacteria PMA3_RS04070 fee818f9faadaf8472db3f44071b6af2 192 SMART SM00749 51 116 27.0 T 13-09-2016 IPR014004 Transport-associated and nodulation domain, bacteria PMA3_RS24400 9c6d8df5d1ad0b7dcecf3c0c7f26ad3c 235 PANTHER PTHR10173:SF29 30 210 2.0E-86 T 13-09-2016 PMA3_RS24400 9c6d8df5d1ad0b7dcecf3c0c7f26ad3c 235 SUPERFAMILY SSF55068 44 215 1.83E-65 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS24400 9c6d8df5d1ad0b7dcecf3c0c7f26ad3c 235 Gene3D G3DSA:3.30.1060.10 34 203 1.6E-65 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS24400 9c6d8df5d1ad0b7dcecf3c0c7f26ad3c 235 Pfam PF01625 Peptide methionine sulfoxide reductase 52 202 6.2E-56 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS24400 9c6d8df5d1ad0b7dcecf3c0c7f26ad3c 235 PANTHER PTHR10173 30 210 2.0E-86 T 13-09-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PMA3_RS24400 9c6d8df5d1ad0b7dcecf3c0c7f26ad3c 235 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 51 201 6.2E-51 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS24400 9c6d8df5d1ad0b7dcecf3c0c7f26ad3c 235 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 50 210 34.655 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 PIRSF PIRSF000106 43 418 2.2E-71 T 13-09-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 Gene3D G3DSA:3.40.50.720 160 417 1.2E-84 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 SMART SM00919 162 398 5.0E-137 T 13-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 Pfam PF03949 Malic enzyme, NAD binding domain 164 353 4.0E-26 T 13-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 SUPERFAMILY SSF51735 162 412 6.73E-82 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 Gene3D G3DSA:3.40.50.10380 7 159 9.8E-49 T 13-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 PANTHER PTHR23406 32 411 4.1E-170 T 13-09-2016 PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 SMART SM01274 17 150 4.5E-77 T 13-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 Pfam PF00390 Malic enzyme, N-terminal domain 22 148 1.9E-25 T 13-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 13-09-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PMA3_RS01470 f1d8d968d6b4a5a42e4af258d7770702 422 SUPERFAMILY SSF53223 9 160 4.1E-51 T 13-09-2016 PMA3_RS13425 6a7942cf07529d878c945854ab3eaad6 197 Gene3D G3DSA:3.40.50.180 11 192 4.8E-61 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS13425 6a7942cf07529d878c945854ab3eaad6 197 PANTHER PTHR24421 11 195 2.2E-42 T 13-09-2016 PMA3_RS13425 6a7942cf07529d878c945854ab3eaad6 197 SUPERFAMILY SSF52738 10 192 4.97E-54 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS13425 6a7942cf07529d878c945854ab3eaad6 197 PANTHER PTHR24421:SF16 11 195 2.2E-42 T 13-09-2016 PMA3_RS13425 6a7942cf07529d878c945854ab3eaad6 197 Pfam PF01339 CheB methylesterase 13 188 9.8E-54 T 13-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PMA3_RS15260 e61ca2402edea630d841d39305d85c22 578 SUPERFAMILY SSF52016 380 565 3.84E-54 T 13-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PMA3_RS15260 e61ca2402edea630d841d39305d85c22 578 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 13-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS15260 e61ca2402edea630d841d39305d85c22 578 PANTHER PTHR21000 8 578 4.7E-269 T 13-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS15260 e61ca2402edea630d841d39305d85c22 578 PANTHER PTHR21000:SF14 8 578 4.7E-269 T 13-09-2016 PMA3_RS15260 e61ca2402edea630d841d39305d85c22 578 Pfam PF00920 Dehydratase family 41 560 4.0E-172 T 13-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PMA3_RS15260 e61ca2402edea630d841d39305d85c22 578 SUPERFAMILY SSF143975 4 379 3.14E-123 T 13-09-2016 PMA3_RS12895 e71ce8d6876b0b66f663c25ffb87ff12 171 Pfam PF07681 DoxX 25 110 2.3E-19 T 13-09-2016 IPR032808 DoxX family PMA3_RS12895 e71ce8d6876b0b66f663c25ffb87ff12 171 PANTHER PTHR33452 2 163 8.6E-69 T 13-09-2016 PMA3_RS12895 e71ce8d6876b0b66f663c25ffb87ff12 171 PANTHER PTHR33452:SF7 2 163 8.6E-69 T 13-09-2016 PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 PANTHER PTHR32552:SF37 1 64 1.8E-203 T 13-09-2016 PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 734 751 - T 13-09-2016 IPR010917 TonB-dependent receptor, conserved site PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 Gene3D G3DSA:2.40.170.20 214 751 6.7E-127 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 SUPERFAMILY SSF56935 89 751 2.18E-119 T 13-09-2016 PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 Pfam PF07715 TonB-dependent Receptor Plug Domain 97 196 2.5E-15 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 Pfam PF00593 TonB dependent receptor 509 750 3.7E-27 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 99 751 3.8E-100 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 PANTHER PTHR32552:SF37 89 751 1.8E-203 T 13-09-2016 PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 Gene3D G3DSA:2.170.130.10 75 206 3.6E-33 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 PANTHER PTHR32552 1 64 1.8E-203 T 13-09-2016 PMA3_RS18345 cf6ed049dc5319558629829e274dfa9f 751 PANTHER PTHR32552 89 751 1.8E-203 T 13-09-2016 PMA3_RS26920 0f4f0bf9bc63d36b9f3ba26cecf9a970 205 Pfam PF00925 GTP cyclohydrolase II 6 170 5.7E-66 T 13-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PMA3_RS26920 0f4f0bf9bc63d36b9f3ba26cecf9a970 205 PANTHER PTHR21327:SF14 3 204 6.4E-120 T 13-09-2016 PMA3_RS26920 0f4f0bf9bc63d36b9f3ba26cecf9a970 205 SUPERFAMILY SSF142695 3 172 2.62E-63 T 13-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PMA3_RS26920 0f4f0bf9bc63d36b9f3ba26cecf9a970 205 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 44.631 T 13-09-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PMA3_RS26920 0f4f0bf9bc63d36b9f3ba26cecf9a970 205 PANTHER PTHR21327 3 204 6.4E-120 T 13-09-2016 PMA3_RS26920 0f4f0bf9bc63d36b9f3ba26cecf9a970 205 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 194 7.5E-77 T 13-09-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 SUPERFAMILY SSF47203 289 462 5.8E-48 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 SUPERFAMILY SSF56645 39 281 4.19E-51 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 584 2.4E-32 T 13-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 Gene3D G3DSA:1.20.140.10 269 461 3.6E-52 T 13-09-2016 PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 5 33 6.1E-11 T 13-09-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.3E-14 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 Gene3D G3DSA:1.10.540.10 39 160 2.5E-11 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 PANTHER PTHR10909 1 477 3.6E-258 T 13-09-2016 PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 2.2E-8 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 4.6E-22 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 PANTHER PTHR10909:SF296 1 477 3.6E-258 T 13-09-2016 PMA3_RS13950 2e32805990a071ccf97f6b588ef20edf 590 Gene3D G3DSA:2.40.110.10 162 268 3.9E-25 T 13-09-2016 PMA3_RS18850 5b289fe2ad4497d30988b241e5e82cdd 294 PANTHER PTHR10992:SF878 24 287 1.7E-48 T 13-09-2016 PMA3_RS18850 5b289fe2ad4497d30988b241e5e82cdd 294 PANTHER PTHR10992 24 287 1.7E-48 T 13-09-2016 PMA3_RS18850 5b289fe2ad4497d30988b241e5e82cdd 294 Gene3D G3DSA:3.40.50.1820 23 281 2.7E-48 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18850 5b289fe2ad4497d30988b241e5e82cdd 294 Pfam PF12697 Alpha/beta hydrolase family 47 278 1.2E-18 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18850 5b289fe2ad4497d30988b241e5e82cdd 294 SUPERFAMILY SSF53474 23 281 4.32E-48 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS28020 5092812e06f38893d0cd9ba51b05b3f6 176 Gene3D G3DSA:3.30.1380.20 6 145 1.7E-21 T 13-09-2016 PMA3_RS28020 5092812e06f38893d0cd9ba51b05b3f6 176 SUPERFAMILY SSF111126 6 145 5.75E-17 T 13-09-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain PMA3_RS28020 5092812e06f38893d0cd9ba51b05b3f6 176 SMART SM00989 107 175 4.4E-5 T 13-09-2016 IPR004096 4-vinyl reductase, 4VR PMA3_RS12215 a5acf3ee628dcb0c2432a2d762a9e498 1292 SUPERFAMILY SSF52058 972 1145 5.27E-21 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS12215 a5acf3ee628dcb0c2432a2d762a9e498 1292 Gene3D G3DSA:3.80.10.10 994 1147 1.5E-20 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS12215 a5acf3ee628dcb0c2432a2d762a9e498 1292 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 1183 1270 2.0E-6 T 13-09-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 Gene3D G3DSA:3.40.190.10 104 190 2.6E-17 T 13-09-2016 PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 Gene3D G3DSA:3.40.190.10 191 277 3.3E-15 T 13-09-2016 PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 SUPERFAMILY SSF46785 13 123 2.52E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 Gene3D G3DSA:1.10.10.10 15 96 9.8E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 PANTHER PTHR30126:SF3 13 308 2.6E-67 T 13-09-2016 PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 Pfam PF03466 LysR substrate binding domain 101 309 2.2E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 74 8.9E-14 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 4.6E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 4.6E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 4.6E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 SUPERFAMILY SSF53850 104 309 7.67E-38 T 13-09-2016 PMA3_RS10175 2532f7d43236efcde2bfeaaf7db543ba 310 PANTHER PTHR30126 13 308 2.6E-67 T 13-09-2016 PMA3_RS07280 1c08172866c048bbae55d2e92d0b0318 288 SUPERFAMILY SSF52833 109 264 7.05E-33 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07280 1c08172866c048bbae55d2e92d0b0318 288 ProSitePatterns PS00194 Thioredoxin family active site. 160 178 - T 13-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PMA3_RS07280 1c08172866c048bbae55d2e92d0b0318 288 PANTHER PTHR10438:SF244 219 265 3.2E-26 T 13-09-2016 PMA3_RS07280 1c08172866c048bbae55d2e92d0b0318 288 PANTHER PTHR10438:SF244 130 195 3.2E-26 T 13-09-2016 PMA3_RS07280 1c08172866c048bbae55d2e92d0b0318 288 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 99 5.9E-9 T 13-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PMA3_RS07280 1c08172866c048bbae55d2e92d0b0318 288 PANTHER PTHR10438 219 265 3.2E-26 T 13-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PMA3_RS07280 1c08172866c048bbae55d2e92d0b0318 288 PANTHER PTHR10438 130 195 3.2E-26 T 13-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PMA3_RS07280 1c08172866c048bbae55d2e92d0b0318 288 Pfam PF00578 AhpC/TSA family 133 244 4.1E-15 T 13-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS07280 1c08172866c048bbae55d2e92d0b0318 288 Gene3D G3DSA:3.40.30.10 118 264 8.6E-37 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS27610 3d8056e075e4c07286ea1a094c7e495f 118 TIGRFAM TIGR00526 folB_dom: FolB domain 2 116 3.4E-30 T 13-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS27610 3d8056e075e4c07286ea1a094c7e495f 118 Pfam PF02152 Dihydroneopterin aldolase 4 114 1.4E-29 T 13-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS27610 3d8056e075e4c07286ea1a094c7e495f 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 115 6.5E-25 T 13-09-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS27610 3d8056e075e4c07286ea1a094c7e495f 118 Gene3D G3DSA:3.30.1130.10 2 116 1.5E-35 T 13-09-2016 PMA3_RS27610 3d8056e075e4c07286ea1a094c7e495f 118 PANTHER PTHR20941 2 118 1.4E-24 T 13-09-2016 PMA3_RS27610 3d8056e075e4c07286ea1a094c7e495f 118 SMART SM00905 4 115 3.2E-46 T 13-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PMA3_RS27610 3d8056e075e4c07286ea1a094c7e495f 118 SUPERFAMILY SSF55620 2 116 6.67E-32 T 13-09-2016 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 PANTHER PTHR30212:SF3 2 291 2.0E-67 T 13-09-2016 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 Pfam PF00175 Oxidoreductase NAD-binding domain 431 546 1.0E-7 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 PRINTS PR00409 Phthalate dioxygenase reductase family signature 348 358 2.6E-7 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 PRINTS PR00409 Phthalate dioxygenase reductase family signature 393 407 2.6E-7 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 PRINTS PR00409 Phthalate dioxygenase reductase family signature 430 449 2.6E-7 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 SUPERFAMILY SSF50475 156 295 3.67E-8 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 124 1.4E-6 T 13-09-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 166 261 1.9E-13 T 13-09-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 Gene3D G3DSA:3.40.50.80 424 564 1.2E-26 T 13-09-2016 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 PANTHER PTHR30212 2 291 2.0E-67 T 13-09-2016 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 628 636 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 Gene3D G3DSA:3.10.20.30 565 669 1.5E-23 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 SUPERFAMILY SSF52343 423 570 3.54E-27 T 13-09-2016 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 Gene3D G3DSA:2.30.110.10 31 125 2.8E-4 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 Gene3D G3DSA:2.30.110.10 163 280 9.2E-10 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 Pfam PF00970 Oxidoreductase FAD-binding domain 326 419 3.6E-12 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 Gene3D G3DSA:2.40.30.10 322 420 3.3E-29 T 13-09-2016 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 SUPERFAMILY SSF63380 321 419 2.89E-28 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 SUPERFAMILY SSF54292 559 670 1.31E-20 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS29970 e02aa83c380ab826e8ce725a232b79f0 678 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 608 667 1.2E-9 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS12255 ea2ce2dd3cf8816ead26f40f598595b1 137 PANTHER PTHR37477 10 134 3.4E-21 T 13-09-2016 PMA3_RS12255 ea2ce2dd3cf8816ead26f40f598595b1 137 Pfam PF01890 Cobalamin synthesis G C-terminus 10 134 8.4E-33 T 13-09-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PMA3_RS12255 ea2ce2dd3cf8816ead26f40f598595b1 137 Gene3D G3DSA:3.30.420.180 7 134 1.6E-37 T 13-09-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PMA3_RS12255 ea2ce2dd3cf8816ead26f40f598595b1 137 SUPERFAMILY SSF159664 8 134 1.96E-38 T 13-09-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PMA3_RS12255 ea2ce2dd3cf8816ead26f40f598595b1 137 PANTHER PTHR37477:SF1 10 134 3.4E-21 T 13-09-2016 PMA3_RS27285 6c7198a5031c2557a5643f50e7941458 156 Gene3D G3DSA:1.10.455.10 8 156 1.5E-66 T 13-09-2016 IPR023798 Ribosomal protein S7 domain PMA3_RS27285 6c7198a5031c2557a5643f50e7941458 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.6 T 13-09-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PMA3_RS27285 6c7198a5031c2557a5643f50e7941458 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 2.4E-68 T 13-09-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PMA3_RS27285 6c7198a5031c2557a5643f50e7941458 156 SUPERFAMILY SSF47973 6 149 1.12E-60 T 13-09-2016 IPR023798 Ribosomal protein S7 domain PMA3_RS27285 6c7198a5031c2557a5643f50e7941458 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.6E-67 T 13-09-2016 IPR023798 Ribosomal protein S7 domain PMA3_RS27285 6c7198a5031c2557a5643f50e7941458 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-09-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 PMA3_RS27285 6c7198a5031c2557a5643f50e7941458 156 PIRSF PIRSF002122 2 156 1.8E-60 T 13-09-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 PMA3_RS27285 6c7198a5031c2557a5643f50e7941458 156 PANTHER PTHR11205 1 156 5.8E-90 T 13-09-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 PMA3_RS23005 25377535e2ed62ea9b26a1c9aba62df9 314 PANTHER PTHR11614 4 303 8.3E-53 T 13-09-2016 PMA3_RS23005 25377535e2ed62ea9b26a1c9aba62df9 314 PIRSF PIRSF037442 1 296 5.4E-40 T 13-09-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 PMA3_RS23005 25377535e2ed62ea9b26a1c9aba62df9 314 SUPERFAMILY SSF53474 4 306 9.7E-44 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS23005 25377535e2ed62ea9b26a1c9aba62df9 314 PANTHER PTHR11614:SF87 4 303 8.3E-53 T 13-09-2016 PMA3_RS23005 25377535e2ed62ea9b26a1c9aba62df9 314 Gene3D G3DSA:3.40.50.1820 4 147 4.5E-52 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS23005 25377535e2ed62ea9b26a1c9aba62df9 314 Gene3D G3DSA:3.40.50.1820 184 304 4.5E-52 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS23005 25377535e2ed62ea9b26a1c9aba62df9 314 Pfam PF12146 Serine aminopeptidase, S33 26 289 2.4E-64 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS29710 da9ff2baf93b6a806342ecb5d8a02941 332 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 3 309 7.4E-100 T 13-09-2016 IPR011862 Phosphate binding protein GO:0006810 PMA3_RS29710 da9ff2baf93b6a806342ecb5d8a02941 332 SUPERFAMILY SSF53850 36 321 9.57E-72 T 13-09-2016 PMA3_RS29710 da9ff2baf93b6a806342ecb5d8a02941 332 Pfam PF12849 PBP superfamily domain 36 295 3.3E-34 T 13-09-2016 IPR024370 PBP domain PMA3_RS29710 da9ff2baf93b6a806342ecb5d8a02941 332 Gene3D G3DSA:3.40.190.10 43 120 1.5E-10 T 13-09-2016 PMA3_RS29710 da9ff2baf93b6a806342ecb5d8a02941 332 Gene3D G3DSA:3.40.190.10 267 318 1.5E-10 T 13-09-2016 PMA3_RS29710 da9ff2baf93b6a806342ecb5d8a02941 332 PANTHER PTHR30570:SF5 17 321 5.3E-159 T 13-09-2016 PMA3_RS29710 da9ff2baf93b6a806342ecb5d8a02941 332 Gene3D G3DSA:3.40.190.10 123 266 3.8E-36 T 13-09-2016 PMA3_RS29710 da9ff2baf93b6a806342ecb5d8a02941 332 PANTHER PTHR30570 17 321 5.3E-159 T 13-09-2016 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 SUPERFAMILY SSF50692 656 773 3.48E-13 T 13-09-2016 IPR009010 Aspartate decarboxylase-like domain PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 Pfam PF01568 Molydopterin dinucleotide binding domain 657 763 1.1E-5 T 13-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 Pfam PF00384 Molybdopterin oxidoreductase 118 500 9.6E-28 T 13-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 SUPERFAMILY SSF53706 56 636 2.22E-145 T 13-09-2016 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 PANTHER PTHR11615 280 779 6.2E-300 T 13-09-2016 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 22 770 3.9E-289 T 13-09-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 Gene3D G3DSA:3.40.228.10 192 403 1.6E-55 T 13-09-2016 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 PANTHER PTHR11615:SF114 1 261 6.2E-300 T 13-09-2016 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 PANTHER PTHR11615:SF114 280 779 6.2E-300 T 13-09-2016 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 Gene3D G3DSA:2.40.40.20 656 748 9.0E-4 T 13-09-2016 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 PIRSF PIRSF000144 2 775 0.0 T 13-09-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 PANTHER PTHR11615 1 261 6.2E-300 T 13-09-2016 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 Gene3D G3DSA:3.40.50.740 404 634 2.4E-55 T 13-09-2016 PMA3_RS00870 1b15d650c6571605315fa6030ef3ddec 782 Gene3D G3DSA:3.40.50.740 118 191 2.4E-55 T 13-09-2016 PMA3_RS29530 726c70337b90a857b6483f2bf28dbb38 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 6.1E-59 T 13-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PMA3_RS29530 726c70337b90a857b6483f2bf28dbb38 259 Gene3D G3DSA:3.60.10.10 1 254 1.5E-65 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS29530 726c70337b90a857b6483f2bf28dbb38 259 PANTHER PTHR22748 1 257 1.9E-65 T 13-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PMA3_RS29530 726c70337b90a857b6483f2bf28dbb38 259 SUPERFAMILY SSF56219 1 254 6.54E-54 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS29530 726c70337b90a857b6483f2bf28dbb38 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 239 2.1E-10 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS29360 86ae18cd00bc85d66192ad1dea3f0bf1 287 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 192 282 1.5E-26 T 13-09-2016 IPR025158 Mg chelatase-related protein, C-terminal domain PMA3_RS29360 86ae18cd00bc85d66192ad1dea3f0bf1 287 PANTHER PTHR32039:SF7 1 282 3.5E-139 T 13-09-2016 IPR004482 Mg chelatase-related protein PMA3_RS29360 86ae18cd00bc85d66192ad1dea3f0bf1 287 SUPERFAMILY SSF52540 1 283 9.24E-40 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29360 86ae18cd00bc85d66192ad1dea3f0bf1 287 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 1 282 4.5E-114 T 13-09-2016 IPR004482 Mg chelatase-related protein PMA3_RS29360 86ae18cd00bc85d66192ad1dea3f0bf1 287 Gene3D G3DSA:3.40.50.300 1 176 2.0E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29360 86ae18cd00bc85d66192ad1dea3f0bf1 287 Pfam PF01078 Magnesium chelatase, subunit ChlI 1 179 2.2E-84 T 13-09-2016 IPR000523 Magnesium chelatase ChlI domain PMA3_RS29360 86ae18cd00bc85d66192ad1dea3f0bf1 287 PANTHER PTHR32039 1 282 3.5E-139 T 13-09-2016 PMA3_RS29360 86ae18cd00bc85d66192ad1dea3f0bf1 287 SMART SM00382 1 180 0.0077 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS01050 f41f6d9d478e2b86de39dca167b76bc2 359 Gene3D G3DSA:3.60.130.10 167 345 1.3E-11 T 13-09-2016 PMA3_RS01050 f41f6d9d478e2b86de39dca167b76bc2 359 SUPERFAMILY SSF51197 144 339 4.12E-7 T 13-09-2016 PMA3_RS24000 7ea74608425a771ed4fd9e6f986d35cb 466 Pfam PF15976 CS1-pili formation C-terminal 356 451 1.6E-25 T 13-09-2016 IPR031917 Pilus assembly protein, C-terminal domain PMA3_RS03800 daec0aa2f9e0ee58bf6c82f99156a8eb 415 Pfam PF01593 Flavin containing amine oxidoreductase 10 303 2.3E-22 T 13-09-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PMA3_RS03800 daec0aa2f9e0ee58bf6c82f99156a8eb 415 Gene3D G3DSA:3.50.50.60 2 104 1.4E-33 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03800 daec0aa2f9e0ee58bf6c82f99156a8eb 415 Gene3D G3DSA:3.50.50.60 201 300 1.4E-33 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03800 daec0aa2f9e0ee58bf6c82f99156a8eb 415 PANTHER PTHR10742:SF275 2 411 8.3E-169 T 13-09-2016 PMA3_RS03800 daec0aa2f9e0ee58bf6c82f99156a8eb 415 PANTHER PTHR10742 2 411 8.3E-169 T 13-09-2016 PMA3_RS03800 daec0aa2f9e0ee58bf6c82f99156a8eb 415 SUPERFAMILY SSF51905 380 411 2.33E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03800 daec0aa2f9e0ee58bf6c82f99156a8eb 415 SUPERFAMILY SSF51905 2 300 2.33E-52 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS26565 88cc95ff4fce1da5dc00704a08bad037 91 Gene3D G3DSA:3.30.70.1460 6 91 2.2E-24 T 13-09-2016 IPR027471 YbeD-like domain PMA3_RS26565 88cc95ff4fce1da5dc00704a08bad037 91 PANTHER PTHR38036 1 91 1.6E-21 T 13-09-2016 PMA3_RS26565 88cc95ff4fce1da5dc00704a08bad037 91 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 3 91 20.97 T 13-09-2016 IPR007454 Uncharacterised protein family UPF0250 PMA3_RS26565 88cc95ff4fce1da5dc00704a08bad037 91 PANTHER PTHR38036:SF1 1 91 1.6E-21 T 13-09-2016 PMA3_RS26565 88cc95ff4fce1da5dc00704a08bad037 91 SUPERFAMILY SSF117991 6 91 9.16E-21 T 13-09-2016 IPR027471 YbeD-like domain PMA3_RS26565 88cc95ff4fce1da5dc00704a08bad037 91 Pfam PF04359 Protein of unknown function (DUF493) 9 91 1.8E-22 T 13-09-2016 IPR007454 Uncharacterised protein family UPF0250 PMA3_RS25645 132cc0cf646efa917a19b3dd399d6db8 223 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 44 220 3.8E-28 T 13-09-2016 IPR003741 LUD domain PMA3_RS25645 132cc0cf646efa917a19b3dd399d6db8 223 PANTHER PTHR32479:SF11 133 222 7.7E-15 T 13-09-2016 PMA3_RS25645 132cc0cf646efa917a19b3dd399d6db8 223 SUPERFAMILY SSF100950 37 221 2.26E-41 T 13-09-2016 PMA3_RS25645 132cc0cf646efa917a19b3dd399d6db8 223 Gene3D G3DSA:3.40.50.10420 37 221 9.4E-41 T 13-09-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PMA3_RS25645 132cc0cf646efa917a19b3dd399d6db8 223 PANTHER PTHR32479 133 222 7.7E-15 T 13-09-2016 PMA3_RS10710 762178c75017c0cf4f73373a1e388fbc 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 108 198 6.3E-17 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS10710 762178c75017c0cf4f73373a1e388fbc 235 PANTHER PTHR18901 24 210 4.3E-37 T 13-09-2016 PMA3_RS10710 762178c75017c0cf4f73373a1e388fbc 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 29 195 1.6E-16 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS10710 762178c75017c0cf4f73373a1e388fbc 235 SUPERFAMILY SSF56784 24 209 2.76E-34 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS10710 762178c75017c0cf4f73373a1e388fbc 235 Gene3D G3DSA:3.40.50.1000 85 226 2.1E-38 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS10710 762178c75017c0cf4f73373a1e388fbc 235 ProSitePatterns PS01228 Hypothetical cof family signature 1. 27 38 - T 13-09-2016 IPR000150 Cof protein GO:0016787 PMA3_RS10710 762178c75017c0cf4f73373a1e388fbc 235 Gene3D G3DSA:1.10.150.240 41 84 2.7E-6 T 13-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 SMART SM00382 166 310 1.0E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 13-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 PANTHER PTHR32071:SF36 1 491 1.3E-263 T 13-09-2016 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 Gene3D G3DSA:3.40.50.300 143 318 1.2E-63 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 SUPERFAMILY SSF52172 3 188 3.4E-11 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 Gene3D G3DSA:1.10.8.60 319 391 5.6E-21 T 13-09-2016 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 SUPERFAMILY SSF46689 428 480 6.72E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 SUPERFAMILY SSF46689 358 398 6.72E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 Pfam PF00158 Sigma-54 interaction domain 146 313 4.1E-75 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 Pfam PF02954 Bacterial regulatory protein, Fis family 441 478 9.5E-11 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 Pfam PF06490 Flagellar regulatory protein FleQ 6 123 1.1E-27 T 13-09-2016 IPR010518 Flagellar regulatory FleQ PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 PANTHER PTHR32071 1 491 1.3E-263 T 13-09-2016 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 SUPERFAMILY SSF52540 146 386 8.58E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 Gene3D G3DSA:1.10.10.60 421 480 4.8E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 461 481 3.2E-8 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS21750 35d306a5c04695e90bbecec45a8139af 491 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 461 3.2E-8 T 13-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PMA3_RS16275 06663fd809848bfba86af8eaf6686fcd 227 PANTHER PTHR24567:SF30 9 225 1.4E-45 T 13-09-2016 PMA3_RS16275 06663fd809848bfba86af8eaf6686fcd 227 Gene3D G3DSA:1.10.10.10 153 226 6.0E-13 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16275 06663fd809848bfba86af8eaf6686fcd 227 Pfam PF00027 Cyclic nucleotide-binding domain 36 123 6.0E-20 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS16275 06663fd809848bfba86af8eaf6686fcd 227 PANTHER PTHR24567 9 225 1.4E-45 T 13-09-2016 PMA3_RS16275 06663fd809848bfba86af8eaf6686fcd 227 Pfam PF13545 Crp-like helix-turn-helix domain 156 225 4.8E-14 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS16275 06663fd809848bfba86af8eaf6686fcd 227 SUPERFAMILY SSF46785 150 223 3.86E-12 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16275 06663fd809848bfba86af8eaf6686fcd 227 Gene3D G3DSA:2.60.120.10 11 150 1.6E-33 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS16275 06663fd809848bfba86af8eaf6686fcd 227 SUPERFAMILY SSF51206 9 150 5.89E-34 T 13-09-2016 IPR018490 Cyclic nucleotide-binding-like PMA3_RS16275 06663fd809848bfba86af8eaf6686fcd 227 SMART SM00419 171 219 2.0E-13 T 13-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PMA3_RS16275 06663fd809848bfba86af8eaf6686fcd 227 SMART SM00100 16 135 7.2E-22 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS05515 8c34c59ff5b30b7c80326ab2adb4ebd7 176 PANTHER PTHR41386 36 166 7.0E-23 T 13-09-2016 PMA3_RS05515 8c34c59ff5b30b7c80326ab2adb4ebd7 176 PANTHER PTHR41386:SF1 36 166 7.0E-23 T 13-09-2016 PMA3_RS05515 8c34c59ff5b30b7c80326ab2adb4ebd7 176 Pfam PF06210 Protein of unknown function (DUF1003) 43 116 5.3E-27 T 13-09-2016 IPR010406 Protein of unknown function DUF1003 PMA3_RS29865 59359768e2f15bd17c34bfaec222bf54 587 PANTHER PTHR16254 557 575 8.3E-109 T 13-09-2016 PMA3_RS29865 59359768e2f15bd17c34bfaec222bf54 587 PANTHER PTHR16254 6 389 8.3E-109 T 13-09-2016 PMA3_RS29865 59359768e2f15bd17c34bfaec222bf54 587 Pfam PF00999 Sodium/hydrogen exchanger family 12 376 9.5E-65 T 13-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PMA3_RS14670 6ffe9d24a3ef35ddba75715df1f98624 363 SUPERFAMILY SSF90002 255 349 2.48E-19 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS14670 6ffe9d24a3ef35ddba75715df1f98624 363 Gene3D G3DSA:3.30.1220.10 236 350 3.9E-28 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS14670 6ffe9d24a3ef35ddba75715df1f98624 363 Gene3D G3DSA:3.40.50.300 9 212 2.1E-67 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14670 6ffe9d24a3ef35ddba75715df1f98624 363 SUPERFAMILY SSF52540 9 196 4.69E-37 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14670 6ffe9d24a3ef35ddba75715df1f98624 363 SMART SM00833 255 349 5.6E-19 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS14670 6ffe9d24a3ef35ddba75715df1f98624 363 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 349 3.6E-18 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS14670 6ffe9d24a3ef35ddba75715df1f98624 363 PANTHER PTHR13748 1 363 3.3E-104 T 13-09-2016 PMA3_RS14670 6ffe9d24a3ef35ddba75715df1f98624 363 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 190 5.8E-51 T 13-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 Pfam PF01842 ACT domain 815 864 9.0E-7 T 13-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 Pfam PF08335 GlnD PII-uridylyltransferase 185 322 3.9E-36 T 13-09-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 Gene3D G3DSA:3.30.70.260 815 868 6.5E-9 T 13-09-2016 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 SUPERFAMILY SSF109604 426 617 1.41E-13 T 13-09-2016 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 SUPERFAMILY SSF55021 814 869 1.22E-9 T 13-09-2016 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 Gene3D G3DSA:3.30.460.10 62 173 1.6E-13 T 13-09-2016 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 36 885 0.0 T 13-09-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 SUPERFAMILY SSF81301 8 181 2.58E-24 T 13-09-2016 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 PANTHER PTHR13734 104 698 1.2E-126 T 13-09-2016 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 897 340.426 T 13-09-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 Pfam PF01966 HD domain 484 568 8.3E-11 T 13-09-2016 IPR006674 HD domain PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 Pfam PF01909 Nucleotidyltransferase domain 66 110 3.7E-7 T 13-09-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 SMART SM00471 457 604 3.5E-10 T 13-09-2016 IPR003607 HD/PDEase domain PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 PANTHER PTHR13734:SF45 104 698 1.2E-126 T 13-09-2016 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 SUPERFAMILY SSF81593 194 316 1.88E-10 T 13-09-2016 PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 Gene3D G3DSA:1.10.3210.10 431 620 9.5E-23 T 13-09-2016 IPR006674 HD domain PMA3_RS04815 e186cc79c22b896717c2416ab37177c8 900 PIRSF PIRSF006288 12 893 0.0 T 13-09-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PMA3_RS26575 7147c7330518b469c477e498e23b256c 338 SUPERFAMILY SSF50685 100 191 2.72E-10 T 13-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PMA3_RS26575 7147c7330518b469c477e498e23b256c 338 SUPERFAMILY SSF110997 262 332 4.32E-11 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS26575 7147c7330518b469c477e498e23b256c 338 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 104 195 1.2E-42 T 13-09-2016 IPR012997 Rare lipoprotein A PMA3_RS26575 7147c7330518b469c477e498e23b256c 338 Pfam PF05036 Sporulation related domain 264 333 3.4E-11 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS26575 7147c7330518b469c477e498e23b256c 338 PANTHER PTHR34183:SF1 6 338 4.5E-118 T 13-09-2016 PMA3_RS26575 7147c7330518b469c477e498e23b256c 338 Gene3D G3DSA:2.40.40.10 140 192 3.9E-4 T 13-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PMA3_RS26575 7147c7330518b469c477e498e23b256c 338 Gene3D G3DSA:3.30.70.1070 258 328 2.1E-9 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS26575 7147c7330518b469c477e498e23b256c 338 PANTHER PTHR34183 6 338 4.5E-118 T 13-09-2016 PMA3_RS26575 7147c7330518b469c477e498e23b256c 338 Pfam PF03330 Lytic transglycolase 102 191 3.5E-25 T 13-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PMA3_RS05525 3fa9000ea7eca819658f39155f89bb1e 350 Gene3D G3DSA:3.60.15.10 36 337 2.2E-95 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS05525 3fa9000ea7eca819658f39155f89bb1e 350 PIRSF PIRSF038896 3 339 3.8E-90 T 13-09-2016 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 PMA3_RS05525 3fa9000ea7eca819658f39155f89bb1e 350 PANTHER PTHR15032:SF4 31 347 2.1E-112 T 13-09-2016 PMA3_RS05525 3fa9000ea7eca819658f39155f89bb1e 350 SUPERFAMILY SSF56281 179 327 2.49E-36 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS05525 3fa9000ea7eca819658f39155f89bb1e 350 SUPERFAMILY SSF56281 77 152 2.49E-36 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS05525 3fa9000ea7eca819658f39155f89bb1e 350 Pfam PF12706 Beta-lactamase superfamily domain 96 287 8.7E-43 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS05525 3fa9000ea7eca819658f39155f89bb1e 350 PANTHER PTHR15032 31 347 2.1E-112 T 13-09-2016 PMA3_RS26475 1300e87055f3152f763781069b82bf5b 154 Gene3D G3DSA:1.10.260.40 2 65 5.8E-12 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS26475 1300e87055f3152f763781069b82bf5b 154 SUPERFAMILY SSF46894 106 151 4.25E-6 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS26475 1300e87055f3152f763781069b82bf5b 154 Gene3D G3DSA:1.10.10.10 120 150 7.3E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26475 1300e87055f3152f763781069b82bf5b 154 Pfam PF13560 Helix-turn-helix domain 6 60 1.4E-9 T 13-09-2016 PMA3_RS26475 1300e87055f3152f763781069b82bf5b 154 SMART SM00530 10 63 3.5E-7 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS26475 1300e87055f3152f763781069b82bf5b 154 SUPERFAMILY SSF47413 4 65 1.44E-10 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS26475 1300e87055f3152f763781069b82bf5b 154 Pfam PF13384 Homeodomain-like domain 124 152 3.3E-6 T 13-09-2016 PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 275 364 4.1E-24 T 13-09-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 PANTHER PTHR21581:SF3 26 385 2.4E-126 T 13-09-2016 PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 Gene3D G3DSA:2.60.410.10 275 365 8.5E-29 T 13-09-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.3E-16 T 13-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 1.3E-16 T 13-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 1.3E-16 T 13-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 SUPERFAMILY SSF56601 9 275 3.76E-89 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 SMART SM00936 275 365 8.3E-33 T 13-09-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 254 4.3E-87 T 13-09-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 Gene3D G3DSA:3.40.710.10 26 274 2.2E-103 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 PANTHER PTHR21581 26 385 2.4E-126 T 13-09-2016 PMA3_RS26570 0c1c96cb1f2a20436a04fd470229fa9a 385 SUPERFAMILY SSF69189 275 367 3.73E-25 T 13-09-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS29840 6120432932f7cc29d60e415cd0243c13 288 Gene3D G3DSA:3.40.50.10490 97 262 3.5E-31 T 13-09-2016 PMA3_RS29840 6120432932f7cc29d60e415cd0243c13 288 SUPERFAMILY SSF46689 2 76 8.06E-18 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS29840 6120432932f7cc29d60e415cd0243c13 288 PANTHER PTHR30514:SF1 2 278 8.0E-92 T 13-09-2016 PMA3_RS29840 6120432932f7cc29d60e415cd0243c13 288 PANTHER PTHR30514 2 278 8.0E-92 T 13-09-2016 PMA3_RS29840 6120432932f7cc29d60e415cd0243c13 288 Pfam PF01380 SIS domain 125 252 1.9E-16 T 13-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PMA3_RS29840 6120432932f7cc29d60e415cd0243c13 288 SUPERFAMILY SSF53697 85 278 9.51E-35 T 13-09-2016 PMA3_RS29840 6120432932f7cc29d60e415cd0243c13 288 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 76 8.5E-22 T 13-09-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PMA3_RS29840 6120432932f7cc29d60e415cd0243c13 288 Gene3D G3DSA:1.10.10.10 2 77 6.6E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00415 b1efa0e364340e006edece9b378a40d3 153 Pfam PF04073 Aminoacyl-tRNA editing domain 23 141 1.4E-18 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS00415 b1efa0e364340e006edece9b378a40d3 153 SUPERFAMILY SSF55826 7 144 4.19E-26 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS00415 b1efa0e364340e006edece9b378a40d3 153 Gene3D G3DSA:3.90.960.10 6 143 9.6E-19 T 13-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PMA3_RS11690 0e47b1967eb9521f73ddc6954ad936c1 361 PANTHER PTHR11935 162 360 4.6E-45 T 13-09-2016 PMA3_RS11690 0e47b1967eb9521f73ddc6954ad936c1 361 SMART SM00849 48 262 5.8E-26 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS11690 0e47b1967eb9521f73ddc6954ad936c1 361 PANTHER PTHR11935:SF109 162 360 4.6E-45 T 13-09-2016 PMA3_RS11690 0e47b1967eb9521f73ddc6954ad936c1 361 Gene3D G3DSA:3.60.15.10 17 129 3.6E-54 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS11690 0e47b1967eb9521f73ddc6954ad936c1 361 Gene3D G3DSA:3.60.15.10 167 291 3.6E-54 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS11690 0e47b1967eb9521f73ddc6954ad936c1 361 PANTHER PTHR11935:SF109 14 146 4.6E-45 T 13-09-2016 PMA3_RS11690 0e47b1967eb9521f73ddc6954ad936c1 361 SUPERFAMILY SSF56281 15 345 2.88E-69 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS11690 0e47b1967eb9521f73ddc6954ad936c1 361 Pfam PF00753 Metallo-beta-lactamase superfamily 47 262 4.9E-29 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS11690 0e47b1967eb9521f73ddc6954ad936c1 361 PANTHER PTHR11935 14 146 4.6E-45 T 13-09-2016 PMA3_RS19690 840ee2db22d3e88f92c4930f538855c0 451 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 234 1.8E-51 T 13-09-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain PMA3_RS19690 840ee2db22d3e88f92c4930f538855c0 451 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 349 431 3.5E-22 T 13-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PMA3_RS19690 840ee2db22d3e88f92c4930f538855c0 451 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 359 370 - T 13-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 PMA3_RS19690 840ee2db22d3e88f92c4930f538855c0 451 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 182 197 - T 13-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 PMA3_RS19690 840ee2db22d3e88f92c4930f538855c0 451 PANTHER PTHR11780 20 434 6.2E-204 T 13-09-2016 PMA3_RS19690 840ee2db22d3e88f92c4930f538855c0 451 SUPERFAMILY SSF142019 30 253 1.14E-85 T 13-09-2016 PMA3_RS19690 840ee2db22d3e88f92c4930f538855c0 451 SMART SM00928 346 391 4.2E-20 T 13-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PMA3_RS19690 840ee2db22d3e88f92c4930f538855c0 451 SUPERFAMILY SSF142984 258 341 1.44E-18 T 13-09-2016 PMA3_RS19690 840ee2db22d3e88f92c4930f538855c0 451 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 433 3.2E-194 T 13-09-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 PMA3_RS19690 840ee2db22d3e88f92c4930f538855c0 451 SUPERFAMILY SSF140490 342 435 6.02E-29 T 13-09-2016 PMA3_RS27780 0d3bd4aa0046e892daf998a9c8bad845 243 SUPERFAMILY SSF53474 4 238 5.36E-28 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS27780 0d3bd4aa0046e892daf998a9c8bad845 243 PANTHER PTHR10992:SF812 4 239 5.9E-21 T 13-09-2016 PMA3_RS27780 0d3bd4aa0046e892daf998a9c8bad845 243 PANTHER PTHR10992 4 239 5.9E-21 T 13-09-2016 PMA3_RS27780 0d3bd4aa0046e892daf998a9c8bad845 243 Pfam PF12697 Alpha/beta hydrolase family 8 230 2.5E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS27780 0d3bd4aa0046e892daf998a9c8bad845 243 Gene3D G3DSA:3.40.50.1820 45 239 1.4E-28 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 PANTHER PTHR24422 12 276 4.6E-102 T 13-09-2016 PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 Pfam PF01739 CheR methyltransferase, SAM binding domain 80 254 8.1E-37 T 13-09-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 SMART SM00138 12 275 7.1E-32 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 2.4E-22 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 PRINTS PR00996 Glutamate methyltransferase family signature 139 155 2.4E-22 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 PRINTS PR00996 Glutamate methyltransferase family signature 107 127 2.4E-22 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 PRINTS PR00996 Glutamate methyltransferase family signature 71 83 2.4E-22 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 2.4E-22 T 13-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 SUPERFAMILY SSF53335 79 259 5.38E-40 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 Pfam PF03705 CheR methyltransferase, all-alpha domain 14 65 1.4E-9 T 13-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 Gene3D G3DSA:3.40.50.150 78 274 3.6E-56 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS13420 346de7902d5f71e6eeb40d8b964c88c8 277 PANTHER PTHR24422:SF8 12 276 4.6E-102 T 13-09-2016 PMA3_RS07260 0b93c7b1505a95c6923e2079900fc711 182 Gene3D G3DSA:1.10.10.10 116 170 3.2E-8 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07260 0b93c7b1505a95c6923e2079900fc711 182 Pfam PF04542 Sigma-70 region 2 24 83 3.4E-13 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS07260 0b93c7b1505a95c6923e2079900fc711 182 SUPERFAMILY SSF88946 20 97 1.69E-13 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS07260 0b93c7b1505a95c6923e2079900fc711 182 PANTHER PTHR30173 16 171 1.9E-40 T 13-09-2016 PMA3_RS07260 0b93c7b1505a95c6923e2079900fc711 182 Gene3D G3DSA:1.10.1740.10 25 83 3.8E-11 T 13-09-2016 PMA3_RS07260 0b93c7b1505a95c6923e2079900fc711 182 SUPERFAMILY SSF88659 103 173 1.18E-12 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS07260 0b93c7b1505a95c6923e2079900fc711 182 PANTHER PTHR30173:SF9 16 171 1.9E-40 T 13-09-2016 PMA3_RS07260 0b93c7b1505a95c6923e2079900fc711 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 168 2.9E-22 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS07260 0b93c7b1505a95c6923e2079900fc711 182 Pfam PF08281 Sigma-70, region 4 116 168 1.0E-12 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS17230 63494faa440ac7989e384631eaa9c405 217 PIRSF PIRSF000239 1 215 2.0E-78 T 13-09-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PMA3_RS17230 63494faa440ac7989e384631eaa9c405 217 SUPERFAMILY SSF52833 3 215 2.35E-71 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS17230 63494faa440ac7989e384631eaa9c405 217 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 163 202 1.5E-15 T 13-09-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS17230 63494faa440ac7989e384631eaa9c405 217 PANTHER PTHR10681 3 206 3.0E-88 T 13-09-2016 PMA3_RS17230 63494faa440ac7989e384631eaa9c405 217 Gene3D G3DSA:3.30.1020.10 165 217 4.2E-28 T 13-09-2016 PMA3_RS17230 63494faa440ac7989e384631eaa9c405 217 Pfam PF00578 AhpC/TSA family 5 142 7.3E-31 T 13-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS17230 63494faa440ac7989e384631eaa9c405 217 PANTHER PTHR10681:SF99 3 206 3.0E-88 T 13-09-2016 PMA3_RS17230 63494faa440ac7989e384631eaa9c405 217 Gene3D G3DSA:3.40.30.10 4 164 1.0E-60 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07640 3dbf480e46386a5d2c602ce5b21d25c7 95 PANTHER PTHR31435:SF3 2 95 9.1E-41 T 13-09-2016 PMA3_RS07640 3dbf480e46386a5d2c602ce5b21d25c7 95 Pfam PF14542 GCN5-related N-acetyl-transferase 15 88 9.1E-25 T 13-09-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase PMA3_RS07640 3dbf480e46386a5d2c602ce5b21d25c7 95 Gene3D G3DSA:3.40.630.30 2 90 8.6E-34 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS07640 3dbf480e46386a5d2c602ce5b21d25c7 95 SUPERFAMILY SSF55729 6 91 1.58E-25 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS07640 3dbf480e46386a5d2c602ce5b21d25c7 95 PANTHER PTHR31435 2 95 9.1E-41 T 13-09-2016 PMA3_RS28255 7baeac0e9fbcceb5426160841ef48ed4 277 PANTHER PTHR22911:SF61 5 275 1.3E-95 T 13-09-2016 PMA3_RS28255 7baeac0e9fbcceb5426160841ef48ed4 277 PANTHER PTHR22911 5 275 1.3E-95 T 13-09-2016 PMA3_RS28255 7baeac0e9fbcceb5426160841ef48ed4 277 Pfam PF00892 EamA-like transporter family 146 275 5.4E-11 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS28255 7baeac0e9fbcceb5426160841ef48ed4 277 SUPERFAMILY SSF103481 38 133 2.48E-13 T 13-09-2016 PMA3_RS28255 7baeac0e9fbcceb5426160841ef48ed4 277 SUPERFAMILY SSF103481 178 276 3.92E-12 T 13-09-2016 PMA3_RS20950 15b9c8e812d6f4a1cb9d8d0f05a273b6 229 Hamap MF_00238 Cytidylate kinase [cmk]. 6 226 34.214 T 13-09-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PMA3_RS20950 15b9c8e812d6f4a1cb9d8d0f05a273b6 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 221 1.7E-81 T 13-09-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PMA3_RS20950 15b9c8e812d6f4a1cb9d8d0f05a273b6 229 Pfam PF02224 Cytidylate kinase 8 222 2.6E-76 T 13-09-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PMA3_RS20950 15b9c8e812d6f4a1cb9d8d0f05a273b6 229 SUPERFAMILY SSF52540 6 222 1.44E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20950 15b9c8e812d6f4a1cb9d8d0f05a273b6 229 PANTHER PTHR21299 6 228 7.2E-75 T 13-09-2016 PMA3_RS20950 15b9c8e812d6f4a1cb9d8d0f05a273b6 229 Gene3D G3DSA:3.40.50.300 6 222 6.8E-76 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 SUPERFAMILY SSF52467 187 308 1.06E-48 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 PIRSF PIRSF000089 1 309 3.8E-105 T 13-09-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 Gene3D G3DSA:3.40.50.620 1 182 1.6E-64 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 PANTHER PTHR10909:SF294 104 305 1.8E-128 T 13-09-2016 PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 SMART SM00893 3 182 4.1E-56 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 Pfam PF01012 Electron transfer flavoprotein domain 4 170 1.4E-39 T 13-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 1.0E-36 T 13-09-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 SUPERFAMILY SSF52402 3 186 1.34E-57 T 13-09-2016 PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 PANTHER PTHR10909 104 305 1.8E-128 T 13-09-2016 PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 Gene3D G3DSA:3.40.50.1220 184 307 1.2E-61 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS06790 05e4aecd72928293d657f912cbdd97d4 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 13-09-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site PMA3_RS24525 af56ec00dd0ac46608be5c3836afe720 422 Pfam PF07690 Major Facilitator Superfamily 26 377 1.5E-20 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS24525 af56ec00dd0ac46608be5c3836afe720 422 Gene3D G3DSA:1.20.1250.20 238 415 3.6E-12 T 13-09-2016 PMA3_RS24525 af56ec00dd0ac46608be5c3836afe720 422 Gene3D G3DSA:1.20.1250.20 20 194 2.5E-15 T 13-09-2016 PMA3_RS24525 af56ec00dd0ac46608be5c3836afe720 422 PANTHER PTHR23513 3 409 3.2E-41 T 13-09-2016 PMA3_RS24525 af56ec00dd0ac46608be5c3836afe720 422 SUPERFAMILY SSF103473 21 413 7.19E-34 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS02505 392c9294c93d41c9f0b284b27032c746 243 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 5 237 6.4E-68 T 13-09-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 PMA3_RS02505 392c9294c93d41c9f0b284b27032c746 243 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 103 135 - T 13-09-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS02505 392c9294c93d41c9f0b284b27032c746 243 PANTHER PTHR21091:SF127 5 218 4.2E-72 T 13-09-2016 PMA3_RS02505 392c9294c93d41c9f0b284b27032c746 243 PIRSF PIRSF036427 3 243 9.4E-72 T 13-09-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 PMA3_RS02505 392c9294c93d41c9f0b284b27032c746 243 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 218 5.8E-47 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS02505 392c9294c93d41c9f0b284b27032c746 243 PANTHER PTHR21091 5 218 4.2E-72 T 13-09-2016 PMA3_RS02505 392c9294c93d41c9f0b284b27032c746 243 SUPERFAMILY SSF53790 3 238 3.93E-49 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS02505 392c9294c93d41c9f0b284b27032c746 243 Gene3D G3DSA:3.40.1010.10 4 136 1.5E-33 T 13-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 PRINTS PR00050 Cold shock protein signature 7 22 1.4E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 PRINTS PR00050 Cold shock protein signature 27 36 1.4E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 PRINTS PR00050 Cold shock protein signature 42 60 1.4E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 PIRSF PIRSF002599 1 70 1.7E-22 T 13-09-2016 IPR012156 Cold shock, CspA GO:0003676 PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 PANTHER PTHR11544 1 67 2.0E-39 T 13-09-2016 PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 13-09-2016 IPR019844 Cold-shock conserved site PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 Gene3D G3DSA:2.40.50.140 5 67 3.1E-30 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 SMART SM00357 6 69 2.0E-27 T 13-09-2016 IPR011129 Cold shock protein GO:0003676 PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 PANTHER PTHR11544:SF63 1 67 2.0E-39 T 13-09-2016 PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 SUPERFAMILY SSF50249 2 67 4.9E-24 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS23195 87d49449b4ef8f092f4b9ab93c7c439d 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 3.0E-28 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS04985 7ed6cfa3b2fa84cfcc4985483f724316 107 SUPERFAMILY SSF54862 1 103 2.96E-23 T 13-09-2016 PMA3_RS04985 7ed6cfa3b2fa84cfcc4985483f724316 107 PANTHER PTHR11938 1 84 1.2E-52 T 13-09-2016 PMA3_RS04985 7ed6cfa3b2fa84cfcc4985483f724316 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 9.3E-22 T 13-09-2016 IPR022569 Ferredoxin, C-terminal PMA3_RS04985 7ed6cfa3b2fa84cfcc4985483f724316 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.4E-18 T 13-09-2016 IPR000813 7Fe ferredoxin GO:0009055 PMA3_RS04985 7ed6cfa3b2fa84cfcc4985483f724316 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.4E-18 T 13-09-2016 IPR000813 7Fe ferredoxin GO:0009055 PMA3_RS04985 7ed6cfa3b2fa84cfcc4985483f724316 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.4E-18 T 13-09-2016 IPR000813 7Fe ferredoxin GO:0009055 PMA3_RS04985 7ed6cfa3b2fa84cfcc4985483f724316 107 Gene3D G3DSA:3.30.70.20 4 99 8.5E-21 T 13-09-2016 PMA3_RS04985 7ed6cfa3b2fa84cfcc4985483f724316 107 PANTHER PTHR11938:SF101 1 84 1.2E-52 T 13-09-2016 PMA3_RS04985 7ed6cfa3b2fa84cfcc4985483f724316 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS04985 7ed6cfa3b2fa84cfcc4985483f724316 107 Pfam PF00037 4Fe-4S binding domain 34 55 2.2E-5 T 13-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PMA3_RS18875 3a48d2cf77a070649cd126594972336f 498 Pfam PF00171 Aldehyde dehydrogenase family 15 477 1.5E-169 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS18875 3a48d2cf77a070649cd126594972336f 498 Gene3D G3DSA:3.40.309.10 265 443 3.1E-67 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS18875 3a48d2cf77a070649cd126594972336f 498 Gene3D G3DSA:3.40.605.10 6 264 4.5E-88 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS18875 3a48d2cf77a070649cd126594972336f 498 SUPERFAMILY SSF53720 4 483 1.07E-160 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS18875 3a48d2cf77a070649cd126594972336f 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS18875 3a48d2cf77a070649cd126594972336f 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS18875 3a48d2cf77a070649cd126594972336f 498 PANTHER PTHR11699:SF198 5 490 1.6E-228 T 13-09-2016 PMA3_RS18875 3a48d2cf77a070649cd126594972336f 498 PANTHER PTHR11699 5 490 1.6E-228 T 13-09-2016 PMA3_RS18780 3e2f4b9051fb41dcc26c97d32146f655 261 Gene3D G3DSA:1.10.3720.10 57 254 2.8E-29 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS18780 3e2f4b9051fb41dcc26c97d32146f655 261 PANTHER PTHR30151 1 254 9.6E-71 T 13-09-2016 PMA3_RS18780 3e2f4b9051fb41dcc26c97d32146f655 261 PANTHER PTHR30151:SF8 1 254 9.6E-71 T 13-09-2016 PMA3_RS18780 3e2f4b9051fb41dcc26c97d32146f655 261 SUPERFAMILY SSF161098 58 253 6.02E-34 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS18780 3e2f4b9051fb41dcc26c97d32146f655 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 252 2.4E-25 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS22900 f8e1d1a327b75c3e0fcd5bad68c75610 198 Pfam PF04336 Protein of unknown function, DUF479 81 183 3.9E-33 T 13-09-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 PMA3_RS22900 f8e1d1a327b75c3e0fcd5bad68c75610 198 PANTHER PTHR38764 2 194 1.4E-65 T 13-09-2016 PMA3_RS22900 f8e1d1a327b75c3e0fcd5bad68c75610 198 PANTHER PTHR38764:SF1 2 194 1.4E-65 T 13-09-2016 PMA3_RS22900 f8e1d1a327b75c3e0fcd5bad68c75610 198 PIRSF PIRSF011489 1 193 3.2E-74 T 13-09-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 PMA3_RS06640 158a757f939c643d201ec327239e638e 112 Pfam PF02223 Thymidylate kinase 1 96 8.4E-17 T 13-09-2016 PMA3_RS06640 158a757f939c643d201ec327239e638e 112 SUPERFAMILY SSF52540 1 99 8.88E-18 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06640 158a757f939c643d201ec327239e638e 112 Gene3D G3DSA:3.40.50.300 1 107 2.8E-28 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06640 158a757f939c643d201ec327239e638e 112 PANTHER PTHR10344 1 108 1.2E-23 T 13-09-2016 PMA3_RS29855 767c1b3bd66b013994987feeec26b77d 290 SUPERFAMILY SSF54427 147 288 3.9E-9 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS29855 767c1b3bd66b013994987feeec26b77d 290 PANTHER PTHR41542:SF1 1 289 3.8E-74 T 13-09-2016 PMA3_RS29855 767c1b3bd66b013994987feeec26b77d 290 Pfam PF04280 Tim44-like domain 166 287 7.5E-9 T 13-09-2016 IPR007379 Tim44-like domain PMA3_RS29855 767c1b3bd66b013994987feeec26b77d 290 SMART SM00978 157 288 9.1E-26 T 13-09-2016 IPR007379 Tim44-like domain PMA3_RS29855 767c1b3bd66b013994987feeec26b77d 290 PANTHER PTHR41542 1 289 3.8E-74 T 13-09-2016 PMA3_RS12660 efc4e27b0f1bbe87683a12cd7151f5c9 400 Gene3D G3DSA:3.40.50.2300 307 359 1.3E-26 T 13-09-2016 PMA3_RS12660 efc4e27b0f1bbe87683a12cd7151f5c9 400 Gene3D G3DSA:3.40.50.2300 37 152 1.3E-26 T 13-09-2016 PMA3_RS12660 efc4e27b0f1bbe87683a12cd7151f5c9 400 Pfam PF13458 Periplasmic binding protein 37 365 1.3E-59 T 13-09-2016 IPR028081 Leucine-binding protein domain PMA3_RS12660 efc4e27b0f1bbe87683a12cd7151f5c9 400 Gene3D G3DSA:3.40.50.2300 156 306 2.7E-20 T 13-09-2016 PMA3_RS12660 efc4e27b0f1bbe87683a12cd7151f5c9 400 SUPERFAMILY SSF53822 38 395 1.81E-69 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS12660 efc4e27b0f1bbe87683a12cd7151f5c9 400 PANTHER PTHR30483 1 366 3.9E-47 T 13-09-2016 PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 SMART SM00895 81 204 1.1E-11 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 SUPERFAMILY SSF46785 9 75 2.86E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 2.3E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 Pfam PF07729 FCD domain 82 203 1.0E-14 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 PANTHER PTHR11751 11 98 7.8E-24 T 13-09-2016 PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.4E-6 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.4E-6 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 Gene3D G3DSA:1.10.10.10 6 72 1.7E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 SUPERFAMILY SSF48008 77 211 4.71E-21 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 SMART SM00345 13 71 5.0E-15 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS12110 52338a8e249db2b866702a76be1a8816 230 Gene3D G3DSA:1.20.120.530 74 212 1.3E-23 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS16620 c6cab94508c43fb440c0456ea46e76a2 457 SUPERFAMILY SSF55931 118 455 6.57E-108 T 13-09-2016 PMA3_RS16620 c6cab94508c43fb440c0456ea46e76a2 457 PANTHER PTHR20852:SF35 10 457 1.7E-166 T 13-09-2016 PMA3_RS16620 c6cab94508c43fb440c0456ea46e76a2 457 Gene3D G3DSA:3.10.20.70 10 119 2.2E-7 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS16620 c6cab94508c43fb440c0456ea46e76a2 457 PANTHER PTHR20852 10 457 1.7E-166 T 13-09-2016 PMA3_RS16620 c6cab94508c43fb440c0456ea46e76a2 457 SUPERFAMILY SSF54368 8 113 2.35E-16 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS16620 c6cab94508c43fb440c0456ea46e76a2 457 SMART SM01230 118 374 1.6E-103 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS16620 c6cab94508c43fb440c0456ea46e76a2 457 Pfam PF00120 Glutamine synthetase, catalytic domain 119 452 6.4E-109 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS16620 c6cab94508c43fb440c0456ea46e76a2 457 Gene3D G3DSA:3.30.590.10 121 443 4.0E-100 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS05760 589d6ddc7c6cd29bed42ce2c0ff012aa 447 SUPERFAMILY SSF55931 110 442 1.28E-101 T 13-09-2016 PMA3_RS05760 589d6ddc7c6cd29bed42ce2c0ff012aa 447 PANTHER PTHR20852:SF63 16 447 1.9E-210 T 13-09-2016 PMA3_RS05760 589d6ddc7c6cd29bed42ce2c0ff012aa 447 SMART SM01230 109 365 7.0E-102 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS05760 589d6ddc7c6cd29bed42ce2c0ff012aa 447 Gene3D G3DSA:3.30.590.10 112 431 8.3E-90 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS05760 589d6ddc7c6cd29bed42ce2c0ff012aa 447 PANTHER PTHR20852 16 447 1.9E-210 T 13-09-2016 PMA3_RS05760 589d6ddc7c6cd29bed42ce2c0ff012aa 447 Pfam PF00120 Glutamine synthetase, catalytic domain 111 441 6.9E-103 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS05760 589d6ddc7c6cd29bed42ce2c0ff012aa 447 Gene3D G3DSA:3.10.20.70 15 108 7.9E-7 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS05760 589d6ddc7c6cd29bed42ce2c0ff012aa 447 SUPERFAMILY SSF54368 15 106 1.83E-11 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS29300 046de314f228a85024cd05c0a88548c2 299 Pfam PF00589 Phage integrase family 111 277 2.9E-42 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS29300 046de314f228a85024cd05c0a88548c2 299 PANTHER PTHR30349 1 299 3.7E-136 T 13-09-2016 PMA3_RS29300 046de314f228a85024cd05c0a88548c2 299 Gene3D G3DSA:1.10.443.10 111 284 3.7E-50 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS29300 046de314f228a85024cd05c0a88548c2 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 291 35.973 T 13-09-2016 IPR023009 Tyrosine recombinase XerC/XerD PMA3_RS29300 046de314f228a85024cd05c0a88548c2 299 SUPERFAMILY SSF47823 4 96 4.71E-20 T 13-09-2016 IPR010998 Integrase, Lambda-type, N-terminal PMA3_RS29300 046de314f228a85024cd05c0a88548c2 299 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 293 2.9E-106 T 13-09-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 PMA3_RS29300 046de314f228a85024cd05c0a88548c2 299 PANTHER PTHR30349:SF17 1 299 3.7E-136 T 13-09-2016 PMA3_RS29300 046de314f228a85024cd05c0a88548c2 299 SUPERFAMILY SSF56349 104 289 2.18E-51 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS29300 046de314f228a85024cd05c0a88548c2 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 3.9E-25 T 13-09-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PMA3_RS29300 046de314f228a85024cd05c0a88548c2 299 Gene3D G3DSA:1.10.150.130 2 97 1.3E-28 T 13-09-2016 IPR023109 Integrase/recombinase, N-terminal PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PANTHER PTHR11670 332 471 6.1E-282 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 SUPERFAMILY SSF53732 2 471 2.22E-161 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 472 61.153 T 13-09-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 ProSitePatterns PS00450 Aconitase family signature 1. 344 360 - T 13-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 Gene3D G3DSA:3.30.499.10 340 471 2.0E-59 T 13-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PANTHER PTHR11670 1 312 6.1E-282 T 13-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PANTHER PTHR11670:SF38 332 471 6.1E-282 T 13-09-2016 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PANTHER PTHR11670:SF38 1 312 6.1E-282 T 13-09-2016 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 Pfam PF00330 Aconitase family (aconitate hydratase) 8 463 1.8E-152 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PRINTS PR00415 Aconitase family signature 405 418 1.4E-47 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PRINTS PR00415 Aconitase family signature 113 121 1.4E-47 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PRINTS PR00415 Aconitase family signature 214 227 1.4E-47 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PRINTS PR00415 Aconitase family signature 124 137 1.4E-47 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PRINTS PR00415 Aconitase family signature 138 153 1.4E-47 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PRINTS PR00415 Aconitase family signature 200 213 1.4E-47 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PRINTS PR00415 Aconitase family signature 87 100 1.4E-47 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PRINTS PR00415 Aconitase family signature 291 305 1.4E-47 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 PRINTS PR00415 Aconitase family signature 348 359 1.4E-47 T 13-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 ProSitePatterns PS01244 Aconitase family signature 2. 405 418 - T 13-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 Gene3D G3DSA:3.40.1060.10 172 286 1.2E-39 T 13-09-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 Gene3D G3DSA:3.30.499.10 4 162 3.4E-20 T 13-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS09015 2693b364fa8ddd3215d63fa3fc2c4cc4 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 471 1.0E-234 T 13-09-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 PANTHER PTHR30537:SF5 1 298 2.3E-102 T 13-09-2016 PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 SUPERFAMILY SSF53850 90 299 3.26E-41 T 13-09-2016 PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 Gene3D G3DSA:3.40.190.10 92 175 1.9E-17 T 13-09-2016 PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 Gene3D G3DSA:1.10.10.10 4 85 7.4E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 PANTHER PTHR30537 1 298 2.3E-102 T 13-09-2016 PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.4E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.4E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.4E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 Pfam PF03466 LysR substrate binding domain 88 295 2.2E-41 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 Gene3D G3DSA:3.40.190.10 176 263 1.1E-14 T 13-09-2016 PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 SUPERFAMILY SSF46785 4 86 8.06E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20550 42edc9d2d6010fc62edefd42c236926d 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 6.6E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07195 454642133917aa6efaf17744ef62fcc5 304 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 6 295 1.9E-133 T 13-09-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 PMA3_RS07195 454642133917aa6efaf17744ef62fcc5 304 SUPERFAMILY SSF111331 4 292 1.9E-59 T 13-09-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain PMA3_RS07195 454642133917aa6efaf17744ef62fcc5 304 Pfam PF00781 Diacylglycerol kinase catalytic domain 11 125 2.9E-21 T 13-09-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PMA3_RS07195 454642133917aa6efaf17744ef62fcc5 304 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 7 289 3.2E-55 T 13-09-2016 IPR005218 Diacylglycerol/lipid kinase PMA3_RS07195 454642133917aa6efaf17744ef62fcc5 304 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 296 45.188 T 13-09-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 PMA3_RS07195 454642133917aa6efaf17744ef62fcc5 304 SMART SM00046 5 125 2.0E-4 T 13-09-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PMA3_RS07195 454642133917aa6efaf17744ef62fcc5 304 PANTHER PTHR12358 31 300 2.7E-40 T 13-09-2016 PMA3_RS03290 974ab6a269e1063d3bb4a5a5e769edce 340 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 244 4.6E-83 T 13-09-2016 IPR017689 Outer membrane protein assembly factor BamD PMA3_RS03290 974ab6a269e1063d3bb4a5a5e769edce 340 Pfam PF13525 Outer membrane lipoprotein 29 232 1.9E-73 T 13-09-2016 PMA3_RS03290 974ab6a269e1063d3bb4a5a5e769edce 340 PANTHER PTHR37423 1 289 1.9E-107 T 13-09-2016 PMA3_RS03290 974ab6a269e1063d3bb4a5a5e769edce 340 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 241 46.491 T 13-09-2016 IPR017689 Outer membrane protein assembly factor BamD PMA3_RS23150 417fb166e7a3c245358479320fbad474 200 SUPERFAMILY SSF48613 13 195 4.77E-52 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS23150 417fb166e7a3c245358479320fbad474 200 Gene3D G3DSA:1.20.910.10 2 194 7.1E-71 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS23150 417fb166e7a3c245358479320fbad474 200 Pfam PF01126 Heme oxygenase 14 192 1.3E-17 T 13-09-2016 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: REACT_9431 PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 SUPERFAMILY SSF54909 62 136 1.74E-14 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 3.6E-16 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 Pfam PF01037 Lrp/AsnC ligand binding domain 68 133 1.5E-11 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 Gene3D G3DSA:1.10.10.10 2 52 3.6E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 PANTHER PTHR30154:SF2 1 141 9.3E-44 T 13-09-2016 PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 SUPERFAMILY SSF46785 1 60 1.33E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 Gene3D G3DSA:3.30.70.920 54 123 2.3E-14 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 SMART SM00344 1 107 2.5E-29 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 9.0E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 9.0E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 9.0E-12 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 13-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PMA3_RS02880 95ac0c7d6e8896104a831605efff5385 151 PANTHER PTHR30154 1 141 9.3E-44 T 13-09-2016 PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 Pfam PF01965 DJ-1/PfpI family 63 198 1.6E-13 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 Gene3D G3DSA:1.10.10.60 244 291 1.4E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 PANTHER PTHR11019:SF68 111 342 1.8E-43 T 13-09-2016 PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 SUPERFAMILY SSF52317 25 216 3.85E-40 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 SMART SM00342 254 337 6.5E-25 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 PANTHER PTHR11019 111 342 1.8E-43 T 13-09-2016 PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 Gene3D G3DSA:3.40.50.880 26 243 1.1E-41 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 SUPERFAMILY SSF46689 237 288 4.03E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 SUPERFAMILY SSF46689 290 339 4.26E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 Gene3D G3DSA:1.10.10.60 292 340 8.3E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 1.4E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 1.4E-6 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS17855 dc6405d222ad817c289dd7ea8b6185f7 343 Pfam PF12833 Helix-turn-helix domain 260 339 1.2E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS05555 60e5091214f078219f78ef19cbe03844 437 Pfam PF13657 HipA N-terminal domain 6 118 1.6E-18 T 13-09-2016 IPR017508 HipA, N-terminal subdomain 1 PMA3_RS05555 60e5091214f078219f78ef19cbe03844 437 Pfam PF07805 HipA-like N-terminal domain 175 265 9.5E-16 T 13-09-2016 IPR012894 HipA, N-terminal subdomain 2 PMA3_RS05555 60e5091214f078219f78ef19cbe03844 437 Pfam PF07804 HipA-like C-terminal domain 271 411 1.1E-27 T 13-09-2016 IPR012893 HipA-like, C-terminal PMA3_RS27970 9a5e38a7be1190b42c10c3bba227841b 238 Pfam PF05857 TraX protein 10 234 1.9E-49 T 13-09-2016 IPR008875 TraX PMA3_RS12315 e6ed0461297bbf4636a600db33a76f87 220 PANTHER PTHR30614 1 220 4.2E-74 T 13-09-2016 PMA3_RS12315 e6ed0461297bbf4636a600db33a76f87 220 SUPERFAMILY SSF161098 16 202 8.37E-40 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12315 e6ed0461297bbf4636a600db33a76f87 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 111 6.5E-28 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS12315 e6ed0461297bbf4636a600db33a76f87 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 9.6E-21 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12315 e6ed0461297bbf4636a600db33a76f87 220 Gene3D G3DSA:1.10.3720.10 15 216 3.6E-42 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS02890 87e7d7e7c5a7b8268539c1cbd4477ed3 444 Gene3D G3DSA:3.40.50.300 212 367 1.8E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02890 87e7d7e7c5a7b8268539c1cbd4477ed3 444 SUPERFAMILY SSF52540 74 359 1.93E-72 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02890 87e7d7e7c5a7b8268539c1cbd4477ed3 444 SMART SM00490 258 339 1.5E-31 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS02890 87e7d7e7c5a7b8268539c1cbd4477ed3 444 SMART SM00487 20 222 1.3E-61 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS02890 87e7d7e7c5a7b8268539c1cbd4477ed3 444 Pfam PF00270 DEAD/DEAH box helicase 25 192 5.8E-49 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS02890 87e7d7e7c5a7b8268539c1cbd4477ed3 444 Gene3D G3DSA:3.40.50.300 1 211 1.0E-78 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02890 87e7d7e7c5a7b8268539c1cbd4477ed3 444 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 13-09-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PMA3_RS02890 87e7d7e7c5a7b8268539c1cbd4477ed3 444 PANTHER PTHR24031 1 369 1.4E-171 T 13-09-2016 PMA3_RS02890 87e7d7e7c5a7b8268539c1cbd4477ed3 444 Pfam PF00271 Helicase conserved C-terminal domain 231 339 8.0E-26 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS02890 87e7d7e7c5a7b8268539c1cbd4477ed3 444 PANTHER PTHR24031:SF261 1 369 1.4E-171 T 13-09-2016 PMA3_RS09735 5b738b09d452a8ea47b94c4d2819944e 316 SUPERFAMILY SSF144083 242 304 3.79E-9 T 13-09-2016 PMA3_RS09735 5b738b09d452a8ea47b94c4d2819944e 316 Gene3D G3DSA:1.20.58.340 230 304 1.8E-15 T 13-09-2016 PMA3_RS09735 5b738b09d452a8ea47b94c4d2819944e 316 Pfam PF01544 CorA-like Mg2+ transporter protein 25 304 2.1E-35 T 13-09-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PMA3_RS09735 5b738b09d452a8ea47b94c4d2819944e 316 PANTHER PTHR21535 24 268 1.3E-21 T 13-09-2016 PMA3_RS09735 5b738b09d452a8ea47b94c4d2819944e 316 SUPERFAMILY SSF143865 17 240 7.72E-22 T 13-09-2016 PMA3_RS09735 5b738b09d452a8ea47b94c4d2819944e 316 PANTHER PTHR21535:SF40 24 268 1.3E-21 T 13-09-2016 PMA3_RS11205 fa397a9bd0cf31f56aac70af0ea11c0d 382 SMART SM00896 269 369 0.0028 T 13-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PMA3_RS11205 fa397a9bd0cf31f56aac70af0ea11c0d 382 SUPERFAMILY SSF54991 266 368 2.88E-6 T 13-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PMA3_RS11205 fa397a9bd0cf31f56aac70af0ea11c0d 382 Pfam PF03147 Ferredoxin-fold anticodon binding domain 269 368 1.5E-5 T 13-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PMA3_RS11205 fa397a9bd0cf31f56aac70af0ea11c0d 382 SUPERFAMILY SSF55681 55 258 5.45E-24 T 13-09-2016 PMA3_RS11205 fa397a9bd0cf31f56aac70af0ea11c0d 382 PANTHER PTHR11538 189 279 1.7E-13 T 13-09-2016 PMA3_RS11205 fa397a9bd0cf31f56aac70af0ea11c0d 382 Pfam PF01409 tRNA synthetases class II core domain (F) 56 258 1.6E-23 T 13-09-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 PMA3_RS11205 fa397a9bd0cf31f56aac70af0ea11c0d 382 Gene3D G3DSA:3.30.70.380 272 368 1.9E-4 T 13-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PMA3_RS11205 fa397a9bd0cf31f56aac70af0ea11c0d 382 Gene3D G3DSA:3.30.930.10 17 260 3.6E-36 T 13-09-2016 PMA3_RS28525 ad0da3811ff2f730dda5a2d68c068948 264 PANTHER PTHR34266 4 263 1.7E-149 T 13-09-2016 PMA3_RS28525 ad0da3811ff2f730dda5a2d68c068948 264 SUPERFAMILY SSF110399 9 250 2.09E-87 T 13-09-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 PMA3_RS28525 ad0da3811ff2f730dda5a2d68c068948 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 258 2.5E-108 T 13-09-2016 PMA3_RS28525 ad0da3811ff2f730dda5a2d68c068948 264 Gene3D G3DSA:3.20.20.70 18 239 2.1E-50 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS28525 ad0da3811ff2f730dda5a2d68c068948 264 PANTHER PTHR34266:SF2 4 263 1.7E-149 T 13-09-2016 PMA3_RS28525 ad0da3811ff2f730dda5a2d68c068948 264 Hamap MF_00443 Thiazole synthase [thiG]. 9 264 41.871 T 13-09-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 PMA3_RS26795 ca4f2358a6164eaeb240a5694d20170e 432 SMART SM00382 22 348 5.9E-5 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS26795 ca4f2358a6164eaeb240a5694d20170e 432 PANTHER PTHR32182:SF13 248 336 9.1E-12 T 13-09-2016 PMA3_RS26795 ca4f2358a6164eaeb240a5694d20170e 432 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 26 323 6.7E-24 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS26795 ca4f2358a6164eaeb240a5694d20170e 432 Gene3D G3DSA:3.40.1140.10 248 343 5.1E-34 T 13-09-2016 PMA3_RS26795 ca4f2358a6164eaeb240a5694d20170e 432 Gene3D G3DSA:3.40.1140.10 1 85 5.1E-34 T 13-09-2016 PMA3_RS26795 ca4f2358a6164eaeb240a5694d20170e 432 PANTHER PTHR32182 248 336 9.1E-12 T 13-09-2016 PMA3_RS26795 ca4f2358a6164eaeb240a5694d20170e 432 SUPERFAMILY SSF52540 234 339 2.46E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26795 ca4f2358a6164eaeb240a5694d20170e 432 SUPERFAMILY SSF52540 1 195 2.46E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07885 672ecaaf0297b6b817d32631ed374d48 317 SUPERFAMILY SSF53474 231 294 2.82E-32 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS07885 672ecaaf0297b6b817d32631ed374d48 317 SUPERFAMILY SSF53474 23 170 2.82E-32 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS07885 672ecaaf0297b6b817d32631ed374d48 317 Pfam PF12146 Serine aminopeptidase, S33 76 277 9.4E-12 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS07885 672ecaaf0297b6b817d32631ed374d48 317 Gene3D G3DSA:3.40.50.1820 31 296 2.8E-37 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS02435 e5c56ec8fbde402d9e6ddd82002be814 421 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 4.9E-180 T 13-09-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA PMA3_RS02435 e5c56ec8fbde402d9e6ddd82002be814 421 SUPERFAMILY SSF53822 30 408 2.56E-91 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS02435 e5c56ec8fbde402d9e6ddd82002be814 421 PANTHER PTHR30483 1 420 7.4E-229 T 13-09-2016 PMA3_RS02435 e5c56ec8fbde402d9e6ddd82002be814 421 Pfam PF13433 Periplasmic binding protein domain 31 407 1.7E-173 T 13-09-2016 PMA3_RS02435 e5c56ec8fbde402d9e6ddd82002be814 421 Gene3D G3DSA:3.40.50.2300 146 345 8.0E-74 T 13-09-2016 PMA3_RS02435 e5c56ec8fbde402d9e6ddd82002be814 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 5.3E-6 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS02435 e5c56ec8fbde402d9e6ddd82002be814 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 5.3E-6 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS02435 e5c56ec8fbde402d9e6ddd82002be814 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 5.3E-6 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS02435 e5c56ec8fbde402d9e6ddd82002be814 421 PANTHER PTHR30483:SF8 1 420 7.4E-229 T 13-09-2016 PMA3_RS17720 2f96cdf275e7c498bba418e88d307d49 137 PANTHER PTHR11019:SF105 21 133 2.5E-33 T 13-09-2016 PMA3_RS17720 2f96cdf275e7c498bba418e88d307d49 137 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 79 121 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS17720 2f96cdf275e7c498bba418e88d307d49 137 SMART SM00342 42 125 5.5E-27 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17720 2f96cdf275e7c498bba418e88d307d49 137 Gene3D G3DSA:1.10.10.60 80 127 9.8E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17720 2f96cdf275e7c498bba418e88d307d49 137 Pfam PF12833 Helix-turn-helix domain 48 125 1.3E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17720 2f96cdf275e7c498bba418e88d307d49 137 Gene3D G3DSA:1.10.10.60 29 79 9.6E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17720 2f96cdf275e7c498bba418e88d307d49 137 SUPERFAMILY SSF46689 27 76 1.21E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17720 2f96cdf275e7c498bba418e88d307d49 137 PANTHER PTHR11019 21 133 2.5E-33 T 13-09-2016 PMA3_RS17720 2f96cdf275e7c498bba418e88d307d49 137 SUPERFAMILY SSF46689 79 127 3.18E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS20350 0ca50d9cfb6d3b1f05f6bdfda9558800 286 SUPERFAMILY SSF51735 102 189 4.1E-8 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20350 0ca50d9cfb6d3b1f05f6bdfda9558800 286 Pfam PF02625 XdhC and CoxI family 13 72 1.7E-16 T 13-09-2016 IPR003777 XdhC- CoxI PMA3_RS20350 0ca50d9cfb6d3b1f05f6bdfda9558800 286 Pfam PF13478 XdhC Rossmann domain 107 248 3.1E-37 T 13-09-2016 IPR027051 XdhC Rossmann domain PMA3_RS20350 0ca50d9cfb6d3b1f05f6bdfda9558800 286 Gene3D G3DSA:3.40.50.720 106 188 1.7E-4 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20350 0ca50d9cfb6d3b1f05f6bdfda9558800 286 PANTHER PTHR30388:SF5 1 277 2.9E-126 T 13-09-2016 PMA3_RS20350 0ca50d9cfb6d3b1f05f6bdfda9558800 286 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 19 249 2.7E-98 T 13-09-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC PMA3_RS20350 0ca50d9cfb6d3b1f05f6bdfda9558800 286 PANTHER PTHR30388 1 277 2.9E-126 T 13-09-2016 PMA3_RS10650 17d40e471b4c260116a62c13db0ab85a 100 SUPERFAMILY SSF53850 11 98 1.3E-12 T 13-09-2016 PMA3_RS10650 17d40e471b4c260116a62c13db0ab85a 100 PANTHER PTHR30537:SF18 10 97 2.4E-39 T 13-09-2016 PMA3_RS10650 17d40e471b4c260116a62c13db0ab85a 100 Gene3D G3DSA:3.40.190.10 11 62 4.6E-9 T 13-09-2016 PMA3_RS10650 17d40e471b4c260116a62c13db0ab85a 100 PANTHER PTHR30537 10 97 2.4E-39 T 13-09-2016 PMA3_RS10650 17d40e471b4c260116a62c13db0ab85a 100 Pfam PF03466 LysR substrate binding domain 11 94 4.4E-12 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 Hamap MF_00641 Malate synthase G [glcB]. 1 725 421.325 T 13-09-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 Pfam PF01274 Malate synthase 18 697 1.1E-202 T 13-09-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 Gene3D G3DSA:3.20.20.360 266 296 3.5E-150 T 13-09-2016 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 Gene3D G3DSA:3.20.20.360 89 135 3.5E-150 T 13-09-2016 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 Gene3D G3DSA:3.20.20.360 336 587 3.5E-150 T 13-09-2016 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 Gene3D G3DSA:1.10.1860.10 1 87 1.1E-35 T 13-09-2016 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 Gene3D G3DSA:2.170.170.11 136 264 2.4E-68 T 13-09-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 Gene3D G3DSA:2.170.170.11 298 335 2.4E-68 T 13-09-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 PANTHER PTHR21631 501 724 1.5E-151 T 13-09-2016 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 PANTHER PTHR21631 35 41 1.5E-151 T 13-09-2016 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 Gene3D G3DSA:1.20.1220.12 590 723 2.4E-75 T 13-09-2016 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 PANTHER PTHR21631:SF7 501 724 1.5E-151 T 13-09-2016 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 PANTHER PTHR21631:SF7 35 41 1.5E-151 T 13-09-2016 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 SUPERFAMILY SSF51645 2 722 0.0 T 13-09-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS27830 f46b8be44c8ba08ff1fe01c6a6c5a33f 725 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 722 0.0 T 13-09-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PMA3_RS08010 db029cf7d9bde84095b5610fb7d80e1d 677 SUPERFAMILY SSF53474 212 279 9.25E-9 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS08010 db029cf7d9bde84095b5610fb7d80e1d 677 Pfam PF11678 Protein of unknown function (DUF3274) 378 655 9.5E-88 T 13-09-2016 IPR021692 Protein of unknown function DUF3274 PMA3_RS08010 db029cf7d9bde84095b5610fb7d80e1d 677 Gene3D G3DSA:3.40.50.1820 337 367 5.6E-7 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS08010 db029cf7d9bde84095b5610fb7d80e1d 677 Gene3D G3DSA:3.40.50.1820 178 277 5.6E-7 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS08010 db029cf7d9bde84095b5610fb7d80e1d 677 Gene3D G3DSA:3.40.50.1820 35 45 5.6E-7 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS08010 db029cf7d9bde84095b5610fb7d80e1d 677 Pfam PF06259 Alpha/beta hydrolase 211 267 1.8E-4 T 13-09-2016 IPR010427 Protein of unknown function DUF1023 PMA3_RS28690 7540b5ee0aceb3ff973ac420132c6515 456 Pfam PF11067 Protein of unknown function (DUF2868) 143 439 1.3E-88 T 13-09-2016 IPR021296 Protein of unknown function DUF2868 PMA3_RS08080 f7410b5f98572cc79c580c7d5d819479 384 Pfam PF07690 Major Facilitator Superfamily 10 326 5.9E-34 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS08080 f7410b5f98572cc79c580c7d5d819479 384 PANTHER PTHR23501:SF4 1 382 2.2E-107 T 13-09-2016 PMA3_RS08080 f7410b5f98572cc79c580c7d5d819479 384 SUPERFAMILY SSF103473 4 375 2.62E-55 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS08080 f7410b5f98572cc79c580c7d5d819479 384 Gene3D G3DSA:1.20.1250.20 5 182 1.5E-25 T 13-09-2016 PMA3_RS08080 f7410b5f98572cc79c580c7d5d819479 384 Gene3D G3DSA:1.20.1250.20 203 376 3.5E-13 T 13-09-2016 PMA3_RS08080 f7410b5f98572cc79c580c7d5d819479 384 PANTHER PTHR23501 1 382 2.2E-107 T 13-09-2016 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 PANTHER PTHR11739:SF12 11 375 8.6E-173 T 13-09-2016 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 PRINTS PR00143 Citrate synthase signature 308 324 1.6E-40 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 PRINTS PR00143 Citrate synthase signature 126 139 1.6E-40 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 PRINTS PR00143 Citrate synthase signature 176 191 1.6E-40 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 PRINTS PR00143 Citrate synthase signature 251 271 1.6E-40 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 PRINTS PR00143 Citrate synthase signature 328 342 1.6E-40 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 PRINTS PR00143 Citrate synthase signature 198 226 1.6E-40 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 SUPERFAMILY SSF48256 10 375 1.57E-127 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 Gene3D G3DSA:1.10.230.10 234 322 2.1E-29 T 13-09-2016 IPR016143 Citrate synthase-like, small alpha subdomain PMA3_RS20495 495a5f340abb647a49244b859940699e 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 5.1E-154 T 13-09-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 PANTHER PTHR11739 11 375 8.6E-173 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 5.9E-118 T 13-09-2016 IPR002020 Citrate synthase GO:0046912 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 13-09-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 Gene3D G3DSA:1.10.580.10 17 233 1.6E-78 T 13-09-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 PMA3_RS20495 495a5f340abb647a49244b859940699e 375 PIRSF PIRSF001369 3 375 3.9E-118 T 13-09-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 263 284 - T 13-09-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 SUPERFAMILY SSF50998 38 579 1.28E-159 T 13-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 PANTHER PTHR32303 243 364 3.7E-110 T 13-09-2016 PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 PANTHER PTHR32303 401 569 3.7E-110 T 13-09-2016 PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 PANTHER PTHR32303 1 223 3.7E-110 T 13-09-2016 PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 SMART SM00564 496 528 6.3E-4 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 SMART SM00564 288 315 110.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 SMART SM00564 445 487 5.9 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 SMART SM00564 139 170 6.7E-5 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 SMART SM00564 90 121 5.1E-4 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 SMART SM00564 183 221 5.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 PANTHER PTHR32303:SF2 1 223 3.7E-110 T 13-09-2016 PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 Pfam PF13360 PQQ-like domain 470 538 2.2E-9 T 13-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 Pfam PF13360 PQQ-like domain 73 236 3.2E-16 T 13-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 PANTHER PTHR32303:SF2 243 364 3.7E-110 T 13-09-2016 PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 PANTHER PTHR32303:SF2 401 569 3.7E-110 T 13-09-2016 PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 Gene3D G3DSA:2.140.10.10 46 588 5.3E-152 T 13-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PMA3_RS15665 5271f3a6cece9bba0eef5ff05edd5b46 592 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 26 556 4.3E-241 T 13-09-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 PMA3_RS14440 61f4409aefc63865e1e7f2e156d4d918 217 SUPERFAMILY SSF52540 1 206 6.08E-19 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14440 61f4409aefc63865e1e7f2e156d4d918 217 Pfam PF02223 Thymidylate kinase 9 188 2.2E-8 T 13-09-2016 PMA3_RS14440 61f4409aefc63865e1e7f2e156d4d918 217 Gene3D G3DSA:3.40.50.300 5 198 2.1E-20 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10440 3c4e808fbb4343d5b3c2918e75725174 547 PANTHER PTHR24096 13 543 1.1E-266 T 13-09-2016 PMA3_RS10440 3c4e808fbb4343d5b3c2918e75725174 547 Gene3D G3DSA:3.40.50.980 30 189 2.4E-29 T 13-09-2016 PMA3_RS10440 3c4e808fbb4343d5b3c2918e75725174 547 Gene3D G3DSA:2.30.38.10 364 440 7.1E-19 T 13-09-2016 PMA3_RS10440 3c4e808fbb4343d5b3c2918e75725174 547 SUPERFAMILY SSF56801 18 544 3.27E-126 T 13-09-2016 PMA3_RS10440 3c4e808fbb4343d5b3c2918e75725174 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS10440 3c4e808fbb4343d5b3c2918e75725174 547 Pfam PF00501 AMP-binding enzyme 31 446 6.4E-88 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS10440 3c4e808fbb4343d5b3c2918e75725174 547 Gene3D G3DSA:3.40.50.980 190 345 1.4E-32 T 13-09-2016 PMA3_RS10440 3c4e808fbb4343d5b3c2918e75725174 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 535 3.2E-16 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS10440 3c4e808fbb4343d5b3c2918e75725174 547 Gene3D G3DSA:3.30.300.30 441 544 2.6E-24 T 13-09-2016 PMA3_RS10440 3c4e808fbb4343d5b3c2918e75725174 547 PANTHER PTHR24096:SF136 13 543 1.1E-266 T 13-09-2016 PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 1.8E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 1.8E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.8E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 Gene3D G3DSA:3.40.50.720 3 240 1.1E-67 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 238 1.5E-45 T 13-09-2016 PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 SUPERFAMILY SSF51735 2 241 8.63E-64 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PANTHER PTHR24322 6 125 5.6E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PANTHER PTHR24322 154 186 5.6E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 5.6E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 5.6E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 5.6E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.6E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.6E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS18135 3a90a9468123c11afa9b0ba6405f09ed 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.6E-40 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS16845 e91bcd01aec90f5984389374700747aa 171 Pfam PF01638 HxlR-like helix-turn-helix 20 107 4.6E-25 T 13-09-2016 IPR002577 Helix-turn-helix, HxlR type PMA3_RS16845 e91bcd01aec90f5984389374700747aa 171 SUPERFAMILY SSF46785 8 142 2.44E-37 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16845 e91bcd01aec90f5984389374700747aa 171 Gene3D G3DSA:1.10.10.10 7 109 8.6E-33 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16845 e91bcd01aec90f5984389374700747aa 171 PANTHER PTHR33204:SF10 1 163 9.4E-36 T 13-09-2016 PMA3_RS16845 e91bcd01aec90f5984389374700747aa 171 PANTHER PTHR33204 1 163 9.4E-36 T 13-09-2016 PMA3_RS28840 b6e51243f50d6195e83dcbdfad959a2a 315 PANTHER PTHR11614 37 294 3.3E-34 T 13-09-2016 PMA3_RS28840 b6e51243f50d6195e83dcbdfad959a2a 315 Gene3D G3DSA:3.40.50.1820 53 310 4.8E-34 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS28840 b6e51243f50d6195e83dcbdfad959a2a 315 Pfam PF12146 Serine aminopeptidase, S33 66 295 4.6E-32 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS28840 b6e51243f50d6195e83dcbdfad959a2a 315 SUPERFAMILY SSF53474 52 294 1.77E-31 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS28840 b6e51243f50d6195e83dcbdfad959a2a 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 144 157 7.5E-6 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS28840 b6e51243f50d6195e83dcbdfad959a2a 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 252 266 7.5E-6 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS28840 b6e51243f50d6195e83dcbdfad959a2a 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 110 7.5E-6 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS01100 21abc2b45b5731689f84784e05dd9473 251 Gene3D G3DSA:3.40.190.10 125 222 3.8E-4 T 13-09-2016 PMA3_RS01100 21abc2b45b5731689f84784e05dd9473 251 Gene3D G3DSA:3.40.190.10 32 120 7.4E-10 T 13-09-2016 PMA3_RS01100 21abc2b45b5731689f84784e05dd9473 251 Gene3D G3DSA:3.40.190.10 223 251 7.4E-10 T 13-09-2016 PMA3_RS01100 21abc2b45b5731689f84784e05dd9473 251 SUPERFAMILY SSF53850 30 251 1.9E-36 T 13-09-2016 PMA3_RS01100 21abc2b45b5731689f84784e05dd9473 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 251 1.0E-21 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS01100 21abc2b45b5731689f84784e05dd9473 251 PANTHER PTHR38834:SF1 1 250 9.2E-112 T 13-09-2016 PMA3_RS01100 21abc2b45b5731689f84784e05dd9473 251 PANTHER PTHR38834 1 250 9.2E-112 T 13-09-2016 PMA3_RS22385 2a8a9d2bc96a5c11250db4c08bf9cf8d 308 SUPERFAMILY SSF53850 94 303 2.53E-28 T 13-09-2016 PMA3_RS22385 2a8a9d2bc96a5c11250db4c08bf9cf8d 308 Gene3D G3DSA:3.40.190.10 180 273 3.4E-20 T 13-09-2016 PMA3_RS22385 2a8a9d2bc96a5c11250db4c08bf9cf8d 308 Gene3D G3DSA:3.40.190.10 280 307 3.9E-20 T 13-09-2016 PMA3_RS22385 2a8a9d2bc96a5c11250db4c08bf9cf8d 308 Gene3D G3DSA:3.40.190.10 94 179 3.9E-20 T 13-09-2016 PMA3_RS22385 2a8a9d2bc96a5c11250db4c08bf9cf8d 308 Gene3D G3DSA:1.10.10.10 5 86 3.3E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22385 2a8a9d2bc96a5c11250db4c08bf9cf8d 308 Pfam PF03466 LysR substrate binding domain 102 305 1.4E-21 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS22385 2a8a9d2bc96a5c11250db4c08bf9cf8d 308 SUPERFAMILY SSF46785 8 85 5.28E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22385 2a8a9d2bc96a5c11250db4c08bf9cf8d 308 PANTHER PTHR30118:SF4 1 307 4.7E-84 T 13-09-2016 PMA3_RS22385 2a8a9d2bc96a5c11250db4c08bf9cf8d 308 PANTHER PTHR30118 1 307 4.7E-84 T 13-09-2016 PMA3_RS22385 2a8a9d2bc96a5c11250db4c08bf9cf8d 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 67 2.0E-12 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09930 9ea3c21e68aebdebf3bb79ced4b8fe02 412 PANTHER PTHR39084 11 412 7.8E-34 T 13-09-2016 PMA3_RS09930 9ea3c21e68aebdebf3bb79ced4b8fe02 412 Pfam PF02308 MgtC family 12 128 2.2E-13 T 13-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PMA3_RS09930 9ea3c21e68aebdebf3bb79ced4b8fe02 412 Pfam PF13194 Domain of unknown function (DUF4010) 177 386 1.7E-45 T 13-09-2016 IPR025105 Domain of unknown function DUF4010 PMA3_RS21055 2b447d6a633db6cf03112e230a279ea8 422 PANTHER PTHR35093 1 422 1.6E-134 T 13-09-2016 PMA3_RS21055 2b447d6a633db6cf03112e230a279ea8 422 SUPERFAMILY SSF56935 24 422 1.59E-100 T 13-09-2016 PMA3_RS21055 2b447d6a633db6cf03112e230a279ea8 422 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 422 7.0E-121 T 13-09-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PMA3_RS21055 2b447d6a633db6cf03112e230a279ea8 422 PANTHER PTHR35093:SF2 1 422 1.6E-134 T 13-09-2016 PMA3_RS21055 2b447d6a633db6cf03112e230a279ea8 422 Gene3D G3DSA:2.40.160.60 24 422 7.2E-128 T 13-09-2016 PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 SUPERFAMILY SSF52440 4 116 1.22E-46 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 1.5E-44 T 13-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 Gene3D G3DSA:3.30.470.20 207 447 2.7E-94 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 SMART SM00878 339 444 2.8E-66 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 5 447 2.0E-223 T 13-09-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 SUPERFAMILY SSF56059 86 350 6.19E-65 T 13-09-2016 PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 Gene3D G3DSA:3.40.50.20 5 132 7.2E-51 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 Pfam PF02785 Biotin carboxylase C-terminal domain 339 444 3.6E-39 T 13-09-2016 IPR005482 Biotin carboxylase, C-terminal PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 SUPERFAMILY SSF51246 334 446 1.78E-43 T 13-09-2016 IPR011054 Rudiment single hybrid motif PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 Gene3D G3DSA:3.30.1490.20 133 206 9.9E-28 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 325 1.6E-80 T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 PANTHER PTHR18866 4 444 8.0E-288 T 13-09-2016 PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS02560 deb63865aaf5e4ab6fd0678d7ad25c2a 452 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 13-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PMA3_RS27825 ec8eaabc7eca4ee50366d846875e7601 172 PANTHER PTHR34875:SF1 1 169 6.2E-92 T 13-09-2016 PMA3_RS27825 ec8eaabc7eca4ee50366d846875e7601 172 SUPERFAMILY SSF55021 87 168 5.09E-15 T 13-09-2016 PMA3_RS27825 ec8eaabc7eca4ee50366d846875e7601 172 Pfam PF13740 ACT domain 3 67 4.0E-15 T 13-09-2016 PMA3_RS27825 ec8eaabc7eca4ee50366d846875e7601 172 PIRSF PIRSF028103 1 171 4.4E-57 T 13-09-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 PMA3_RS27825 ec8eaabc7eca4ee50366d846875e7601 172 Gene3D G3DSA:3.30.70.260 85 169 9.0E-22 T 13-09-2016 PMA3_RS27825 ec8eaabc7eca4ee50366d846875e7601 172 PANTHER PTHR34875 1 169 6.2E-92 T 13-09-2016 PMA3_RS27825 ec8eaabc7eca4ee50366d846875e7601 172 SUPERFAMILY SSF55021 1 68 3.28E-15 T 13-09-2016 PMA3_RS27825 ec8eaabc7eca4ee50366d846875e7601 172 Gene3D G3DSA:3.30.70.260 1 70 2.9E-20 T 13-09-2016 PMA3_RS26490 719d576b114bfec899589563a633e194 317 SUPERFAMILY SSF51556 3 312 6.81E-84 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS26490 719d576b114bfec899589563a633e194 317 Pfam PF00962 Adenosine/AMP deaminase 8 311 3.1E-69 T 13-09-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 PMA3_RS26490 719d576b114bfec899589563a633e194 317 PANTHER PTHR11409 1 312 7.2E-172 T 13-09-2016 PMA3_RS26490 719d576b114bfec899589563a633e194 317 Hamap MF_01962 Adenine deaminase. 4 316 85.063 T 13-09-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 PMA3_RS26490 719d576b114bfec899589563a633e194 317 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 313 2.0E-109 T 13-09-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 PMA3_RS26490 719d576b114bfec899589563a633e194 317 Gene3D G3DSA:3.20.20.140 4 313 2.6E-100 T 13-09-2016 PMA3_RS26490 719d576b114bfec899589563a633e194 317 PANTHER PTHR11409:SF41 1 312 7.2E-172 T 13-09-2016 PMA3_RS10580 45e1eebe557b3d0ea6f63c8447ba8d4b 893 Gene3D G3DSA:1.10.530.40 695 730 2.1E-5 T 13-09-2016 IPR023347 Lysozyme domain GO:0003796 PMA3_RS10580 45e1eebe557b3d0ea6f63c8447ba8d4b 893 Gene3D G3DSA:1.10.530.40 770 887 2.1E-5 T 13-09-2016 IPR023347 Lysozyme domain GO:0003796 PMA3_RS10580 45e1eebe557b3d0ea6f63c8447ba8d4b 893 ProSitePatterns PS00018 EF-hand calcium-binding domain. 570 582 - T 13-09-2016 IPR018247 EF-Hand 1, calcium-binding site PMA3_RS10580 45e1eebe557b3d0ea6f63c8447ba8d4b 893 Pfam PF16754 Bacterial toxin homologue of phage lysozyme, C-term 700 802 8.4E-8 T 13-09-2016 IPR031922 Bacterial toxin homologue of phage lysozyme, C-terminal PMA3_RS10580 45e1eebe557b3d0ea6f63c8447ba8d4b 893 SUPERFAMILY SSF53955 688 734 7.03E-7 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS10580 45e1eebe557b3d0ea6f63c8447ba8d4b 893 SUPERFAMILY SSF53955 774 887 7.03E-7 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS00370 83fb9dd566dedba717ad91ef6e5d4c57 543 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 22 538 1.3E-205 T 13-09-2016 IPR017744 Cellulose biosynthesis protein BcsG PMA3_RS00370 83fb9dd566dedba717ad91ef6e5d4c57 543 Pfam PF11658 Cellulose biosynthesis protein BcsG 24 532 1.2E-206 T 13-09-2016 IPR017744 Cellulose biosynthesis protein BcsG PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 PANTHER PTHR22835 1 447 1.4E-50 T 13-09-2016 PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 34 314 1.2E-9 T 13-09-2016 IPR001087 GDSL lipase/esterase GO:0016788 PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 334 635 9.6E-12 T 13-09-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 SUPERFAMILY SSF52266 292 320 7.16E-12 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 SUPERFAMILY SSF52266 111 255 7.16E-12 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 SUPERFAMILY SSF52266 31 66 7.16E-12 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 32 43 - T 13-09-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 PANTHER PTHR22835:SF222 1 447 1.4E-50 T 13-09-2016 PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 SUPERFAMILY SSF103515 339 631 1.44E-42 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 Pfam PF03797 Autotransporter beta-domain 359 620 9.3E-49 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 SMART SM00869 360 625 4.9E-39 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 Gene3D G3DSA:3.40.50.1110 17 326 2.0E-55 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 PIRSF PIRSF037375 2 635 4.4E-210 T 13-09-2016 IPR017186 Lipase, autotransporter EstA PMA3_RS27480 ef21052215b12eb6f3d3f24ecf535d44 635 Gene3D G3DSA:2.40.128.130 332 635 3.4E-66 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS01140 e87c797aa2998a061d0e58dd45fe34c1 84 PANTHER PTHR10168 4 84 3.3E-27 T 13-09-2016 PMA3_RS01140 e87c797aa2998a061d0e58dd45fe34c1 84 SUPERFAMILY SSF52833 1 83 6.58E-29 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS01140 e87c797aa2998a061d0e58dd45fe34c1 84 Gene3D G3DSA:3.40.30.10 2 83 6.2E-30 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS01140 e87c797aa2998a061d0e58dd45fe34c1 84 PRINTS PR00160 Glutaredoxin signature 46 59 2.0E-14 T 13-09-2016 IPR014025 Glutaredoxin subgroup PMA3_RS01140 e87c797aa2998a061d0e58dd45fe34c1 84 PRINTS PR00160 Glutaredoxin signature 4 22 2.0E-14 T 13-09-2016 IPR014025 Glutaredoxin subgroup PMA3_RS01140 e87c797aa2998a061d0e58dd45fe34c1 84 PRINTS PR00160 Glutaredoxin signature 60 73 2.0E-14 T 13-09-2016 IPR014025 Glutaredoxin subgroup PMA3_RS01140 e87c797aa2998a061d0e58dd45fe34c1 84 Pfam PF00462 Glutaredoxin 4 63 1.9E-21 T 13-09-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PMA3_RS01140 e87c797aa2998a061d0e58dd45fe34c1 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 1.0E-35 T 13-09-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 PMA3_RS06165 4c5e8a06465fca0526c5729ca5de7ef9 336 SUPERFAMILY SSF52540 52 192 1.54E-12 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06165 4c5e8a06465fca0526c5729ca5de7ef9 336 PANTHER PTHR30160 1 315 1.1E-88 T 13-09-2016 PMA3_RS06165 4c5e8a06465fca0526c5729ca5de7ef9 336 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 331 37.5 T 13-09-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PMA3_RS06165 4c5e8a06465fca0526c5729ca5de7ef9 336 PANTHER PTHR30160:SF13 1 315 1.1E-88 T 13-09-2016 PMA3_RS06165 4c5e8a06465fca0526c5729ca5de7ef9 336 Gene3D G3DSA:3.40.50.300 50 128 3.5E-5 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06165 4c5e8a06465fca0526c5729ca5de7ef9 336 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 25 313 1.3E-77 T 13-09-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PMA3_RS06165 4c5e8a06465fca0526c5729ca5de7ef9 336 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 326 1.2E-106 T 13-09-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.9E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.9E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.9E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 Gene3D G3DSA:3.40.190.10 81 194 3.9E-21 T 13-09-2016 PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 Gene3D G3DSA:1.10.10.10 1 80 1.1E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 PANTHER PTHR30293:SF1 1 296 4.0E-74 T 13-09-2016 PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 PANTHER PTHR30293 1 296 4.0E-74 T 13-09-2016 PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 SUPERFAMILY SSF53850 88 294 1.22E-35 T 13-09-2016 PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 SUPERFAMILY SSF46785 1 86 3.27E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 Pfam PF03466 LysR substrate binding domain 87 291 4.4E-37 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.9E-24 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09830 41d9211066a420795b63422fbb133dd9 317 Gene3D G3DSA:3.40.190.10 195 259 8.1E-7 T 13-09-2016 PMA3_RS20130 23fd84f4fc5fc54589709ea5cb7bcde4 464 SUPERFAMILY SSF56954 3 462 5.23E-97 T 13-09-2016 PMA3_RS20130 23fd84f4fc5fc54589709ea5cb7bcde4 464 Pfam PF02321 Outer membrane efflux protein 280 458 5.3E-21 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS20130 23fd84f4fc5fc54589709ea5cb7bcde4 464 Pfam PF02321 Outer membrane efflux protein 58 252 6.2E-22 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS20130 23fd84f4fc5fc54589709ea5cb7bcde4 464 Gene3D G3DSA:1.20.1600.10 47 463 2.7E-97 T 13-09-2016 PMA3_RS20130 23fd84f4fc5fc54589709ea5cb7bcde4 464 PANTHER PTHR30203:SF10 11 462 2.3E-192 T 13-09-2016 PMA3_RS20130 23fd84f4fc5fc54589709ea5cb7bcde4 464 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 460 4.0E-99 T 13-09-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PMA3_RS20130 23fd84f4fc5fc54589709ea5cb7bcde4 464 PANTHER PTHR30203 11 462 2.3E-192 T 13-09-2016 PMA3_RS25140 45895d554fc47d6a2430e6955276384c 142 Gene3D G3DSA:1.25.40.10 6 75 3.4E-6 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS25140 45895d554fc47d6a2430e6955276384c 142 SUPERFAMILY SSF48452 8 78 1.42E-6 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS30285 5e1f9130292d01c96f35c4cc63fb0f05 208 PANTHER PTHR36698 1 200 1.5E-40 T 13-09-2016 PMA3_RS30285 5e1f9130292d01c96f35c4cc63fb0f05 208 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 30 192 4.3E-22 T 13-09-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PMA3_RS30285 5e1f9130292d01c96f35c4cc63fb0f05 208 Gene3D G3DSA:3.40.50.10610 18 200 8.4E-56 T 13-09-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PMA3_RS30285 5e1f9130292d01c96f35c4cc63fb0f05 208 PANTHER PTHR36698:SF1 1 200 1.5E-40 T 13-09-2016 PMA3_RS30285 5e1f9130292d01c96f35c4cc63fb0f05 208 SUPERFAMILY SSF159594 28 199 2.88E-40 T 13-09-2016 PMA3_RS22650 68b15dfc6411b255a1826e6cf0f266a6 495 Gene3D G3DSA:3.30.450.20 165 293 4.3E-7 T 13-09-2016 PMA3_RS22650 68b15dfc6411b255a1826e6cf0f266a6 495 SUPERFAMILY SSF55073 333 487 6.04E-50 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS22650 68b15dfc6411b255a1826e6cf0f266a6 495 Gene3D G3DSA:3.30.70.270 330 487 2.8E-56 T 13-09-2016 PMA3_RS22650 68b15dfc6411b255a1826e6cf0f266a6 495 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 484 5.9E-50 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS22650 68b15dfc6411b255a1826e6cf0f266a6 495 Pfam PF02743 Cache domain 74 280 4.4E-17 T 13-09-2016 IPR033479 Double Cache domain 1 PMA3_RS22650 68b15dfc6411b255a1826e6cf0f266a6 495 PANTHER PTHR10799:SF750 266 484 2.4E-30 T 13-09-2016 PMA3_RS22650 68b15dfc6411b255a1826e6cf0f266a6 495 PANTHER PTHR10799 266 484 2.4E-30 T 13-09-2016 PMA3_RS22650 68b15dfc6411b255a1826e6cf0f266a6 495 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 487 4.2E-49 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS22650 68b15dfc6411b255a1826e6cf0f266a6 495 SMART SM00267 317 488 1.0E-63 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS21915 56ed6a4a7f036f56b3e7bad3c8f8fd28 225 SUPERFAMILY SSF46894 126 223 2.83E-20 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS21915 56ed6a4a7f036f56b3e7bad3c8f8fd28 225 Gene3D G3DSA:1.10.10.10 126 222 2.4E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21915 56ed6a4a7f036f56b3e7bad3c8f8fd28 225 Gene3D G3DSA:3.40.50.2300 3 122 2.6E-40 T 13-09-2016 PMA3_RS21915 56ed6a4a7f036f56b3e7bad3c8f8fd28 225 Pfam PF00072 Response regulator receiver domain 5 113 9.4E-27 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21915 56ed6a4a7f036f56b3e7bad3c8f8fd28 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 9.9E-15 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS21915 56ed6a4a7f036f56b3e7bad3c8f8fd28 225 SMART SM00862 147 223 2.8E-14 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS21915 56ed6a4a7f036f56b3e7bad3c8f8fd28 225 PANTHER PTHR26402 2 223 4.0E-94 T 13-09-2016 PMA3_RS21915 56ed6a4a7f036f56b3e7bad3c8f8fd28 225 SMART SM00448 2 113 6.6E-39 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS21915 56ed6a4a7f036f56b3e7bad3c8f8fd28 225 SUPERFAMILY SSF52172 4 123 1.85E-39 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS21915 56ed6a4a7f036f56b3e7bad3c8f8fd28 225 PANTHER PTHR26402:SF476 2 223 4.0E-94 T 13-09-2016 PMA3_RS28575 a577ea19b34db3b9c84a7094bc8f649a 201 PIRSF PIRSF004553 18 199 5.8E-47 T 13-09-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS28575 a577ea19b34db3b9c84a7094bc8f649a 201 SUPERFAMILY SSF53335 19 196 2.94E-45 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS28575 a577ea19b34db3b9c84a7094bc8f649a 201 PANTHER PTHR18895:SF60 18 199 7.9E-38 T 13-09-2016 PMA3_RS28575 a577ea19b34db3b9c84a7094bc8f649a 201 Gene3D G3DSA:3.40.50.150 13 198 2.7E-54 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS28575 a577ea19b34db3b9c84a7094bc8f649a 201 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 38 54 9.3E-6 T 13-09-2016 PMA3_RS28575 a577ea19b34db3b9c84a7094bc8f649a 201 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 63 77 9.3E-6 T 13-09-2016 PMA3_RS28575 a577ea19b34db3b9c84a7094bc8f649a 201 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 129 141 9.3E-6 T 13-09-2016 PMA3_RS28575 a577ea19b34db3b9c84a7094bc8f649a 201 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 12 197 4.3E-50 T 13-09-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PMA3_RS28575 a577ea19b34db3b9c84a7094bc8f649a 201 PANTHER PTHR18895 18 199 7.9E-38 T 13-09-2016 PMA3_RS28575 a577ea19b34db3b9c84a7094bc8f649a 201 Pfam PF03602 Conserved hypothetical protein 95 19 195 1.2E-54 T 13-09-2016 PMA3_RS10415 44bbe6770c2b6e770c16cca9bcd4ac21 670 Pfam PF06980 Protein of unknown function (DUF1302) 33 670 2.1E-131 T 13-09-2016 IPR010727 Protein of unknown function DUF1302 PMA3_RS10790 640577010465304db6d671ff868468c6 338 SUPERFAMILY SSF51430 10 324 3.4E-61 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS10790 640577010465304db6d671ff868468c6 338 PANTHER PTHR11732:SF241 110 335 5.7E-120 T 13-09-2016 PMA3_RS10790 640577010465304db6d671ff868468c6 338 PANTHER PTHR11732:SF241 11 87 5.7E-120 T 13-09-2016 PMA3_RS10790 640577010465304db6d671ff868468c6 338 Pfam PF00248 Aldo/keto reductase family 11 324 4.7E-50 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS10790 640577010465304db6d671ff868468c6 338 PANTHER PTHR11732 110 335 5.7E-120 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS10790 640577010465304db6d671ff868468c6 338 PANTHER PTHR11732 11 87 5.7E-120 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS10790 640577010465304db6d671ff868468c6 338 Gene3D G3DSA:3.20.20.100 10 324 4.9E-55 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS24280 38570cd6f8464f3238fce0c4a5e2cb30 258 PANTHER PTHR23416 1 216 1.8E-103 T 13-09-2016 PMA3_RS24280 38570cd6f8464f3238fce0c4a5e2cb30 258 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 1.8E-77 T 13-09-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 PMA3_RS24280 38570cd6f8464f3238fce0c4a5e2cb30 258 PANTHER PTHR23416:SF55 1 216 1.8E-103 T 13-09-2016 PMA3_RS24280 38570cd6f8464f3238fce0c4a5e2cb30 258 Gene3D G3DSA:2.160.10.10 59 216 3.5E-37 T 13-09-2016 PMA3_RS24280 38570cd6f8464f3238fce0c4a5e2cb30 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 3.0E-6 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS24280 38570cd6f8464f3238fce0c4a5e2cb30 258 SUPERFAMILY SSF51161 2 173 2.77E-54 T 13-09-2016 IPR011004 Trimeric LpxA-like PMA3_RS24280 38570cd6f8464f3238fce0c4a5e2cb30 258 Gene3D G3DSA:1.10.3130.10 1 58 5.3E-26 T 13-09-2016 PMA3_RS22265 4bd8403ff103565d6d5a78727e70f02a 166 Gene3D G3DSA:1.10.260.40 90 154 6.8E-26 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS22265 4bd8403ff103565d6d5a78727e70f02a 166 Pfam PF10387 Protein of unknown function (DUF2442) 12 80 2.1E-9 T 13-09-2016 IPR018841 Protein of unknown function DUF2442 PMA3_RS22265 4bd8403ff103565d6d5a78727e70f02a 166 Gene3D G3DSA:3.30.2020.10 3 86 3.5E-26 T 13-09-2016 IPR018841 Protein of unknown function DUF2442 PMA3_RS22265 4bd8403ff103565d6d5a78727e70f02a 166 SUPERFAMILY SSF143880 4 87 6.15E-17 T 13-09-2016 IPR018841 Protein of unknown function DUF2442 PMA3_RS22265 4bd8403ff103565d6d5a78727e70f02a 166 SUPERFAMILY SSF47413 93 151 2.28E-18 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS10875 249ca0e721163635281b137d81aaca1b 162 PANTHER PTHR34584:SF1 3 162 3.0E-22 T 13-09-2016 PMA3_RS10875 249ca0e721163635281b137d81aaca1b 162 PANTHER PTHR34584 3 162 3.0E-22 T 13-09-2016 PMA3_RS10875 249ca0e721163635281b137d81aaca1b 162 PIRSF PIRSF019239 1 162 1.3E-30 T 13-09-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PMA3_RS10875 249ca0e721163635281b137d81aaca1b 162 Pfam PF01899 Na+/H+ ion antiporter subunit 12 160 1.2E-34 T 13-09-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PMA3_RS14895 8de2c22c6406187e2f56e0d71a62c67d 528 PANTHER PTHR12526 51 518 5.3E-186 T 13-09-2016 PMA3_RS14895 8de2c22c6406187e2f56e0d71a62c67d 528 Pfam PF08323 Starch synthase catalytic domain 51 285 5.4E-71 T 13-09-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 PMA3_RS14895 8de2c22c6406187e2f56e0d71a62c67d 528 Hamap MF_00484 Glycogen synthase [glgA]. 50 517 40.123 T 13-09-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 PMA3_RS14895 8de2c22c6406187e2f56e0d71a62c67d 528 PANTHER PTHR12526:SF295 51 518 5.3E-186 T 13-09-2016 PMA3_RS14895 8de2c22c6406187e2f56e0d71a62c67d 528 Gene3D G3DSA:3.40.50.2000 302 498 8.9E-65 T 13-09-2016 PMA3_RS14895 8de2c22c6406187e2f56e0d71a62c67d 528 SUPERFAMILY SSF53756 47 519 2.48E-104 T 13-09-2016 PMA3_RS14895 8de2c22c6406187e2f56e0d71a62c67d 528 Pfam PF00534 Glycosyl transferases group 1 340 479 3.8E-14 T 13-09-2016 IPR001296 Glycosyl transferase, family 1 PMA3_RS14895 8de2c22c6406187e2f56e0d71a62c67d 528 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 51 517 3.4E-145 T 13-09-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 PMA3_RS28600 7e55877aacb762410c88153c1f3eb065 284 Pfam PF00581 Rhodanese-like domain 160 274 1.6E-10 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS28600 7e55877aacb762410c88153c1f3eb065 284 Pfam PF00581 Rhodanese-like domain 12 131 7.0E-14 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS28600 7e55877aacb762410c88153c1f3eb065 284 SUPERFAMILY SSF52821 161 283 7.46E-31 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS28600 7e55877aacb762410c88153c1f3eb065 284 Gene3D G3DSA:3.40.250.10 160 284 3.3E-34 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS28600 7e55877aacb762410c88153c1f3eb065 284 PANTHER PTHR11364 1 283 4.0E-86 T 13-09-2016 PMA3_RS28600 7e55877aacb762410c88153c1f3eb065 284 PANTHER PTHR11364:SF0 1 283 4.0E-86 T 13-09-2016 PMA3_RS28600 7e55877aacb762410c88153c1f3eb065 284 SMART SM00450 7 135 2.4E-17 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS28600 7e55877aacb762410c88153c1f3eb065 284 SMART SM00450 158 278 5.8E-7 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS28600 7e55877aacb762410c88153c1f3eb065 284 SUPERFAMILY SSF52821 4 154 8.25E-36 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS28600 7e55877aacb762410c88153c1f3eb065 284 Gene3D G3DSA:3.40.250.10 4 153 4.0E-41 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS21135 5c49a01cf463df21079a2b9b3d14b40c 437 Pfam PF07995 Glucose / Sorbosone dehydrogenase 170 362 2.5E-15 T 13-09-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 PMA3_RS21135 5c49a01cf463df21079a2b9b3d14b40c 437 SUPERFAMILY SSF50952 62 95 9.81E-35 T 13-09-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 PMA3_RS21135 5c49a01cf463df21079a2b9b3d14b40c 437 SUPERFAMILY SSF50952 126 435 9.81E-35 T 13-09-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 PMA3_RS21135 5c49a01cf463df21079a2b9b3d14b40c 437 PANTHER PTHR19328 44 98 5.9E-164 T 13-09-2016 PMA3_RS21135 5c49a01cf463df21079a2b9b3d14b40c 437 PANTHER PTHR19328 129 436 5.9E-164 T 13-09-2016 PMA3_RS21135 5c49a01cf463df21079a2b9b3d14b40c 437 PANTHER PTHR19328:SF26 44 98 5.9E-164 T 13-09-2016 PMA3_RS21135 5c49a01cf463df21079a2b9b3d14b40c 437 Gene3D G3DSA:2.120.10.30 17 20 1.7E-58 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS21135 5c49a01cf463df21079a2b9b3d14b40c 437 Gene3D G3DSA:2.120.10.30 62 434 1.7E-58 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS21135 5c49a01cf463df21079a2b9b3d14b40c 437 PANTHER PTHR19328:SF26 129 436 5.9E-164 T 13-09-2016 PMA3_RS15285 7b97ed4e195fbad8400a6fb2545d403f 357 SUPERFAMILY SSF50939 61 337 8.04E-50 T 13-09-2016 IPR011040 Sialidases PMA3_RS15285 7b97ed4e195fbad8400a6fb2545d403f 357 Pfam PF02012 BNR/Asp-box repeat 83 92 0.092 T 13-09-2016 IPR002860 BNR repeat PMA3_RS15285 7b97ed4e195fbad8400a6fb2545d403f 357 PANTHER PTHR32010 60 314 3.9E-36 T 13-09-2016 PMA3_RS15285 7b97ed4e195fbad8400a6fb2545d403f 357 Gene3D G3DSA:2.130.10.10 62 314 3.1E-40 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS15285 7b97ed4e195fbad8400a6fb2545d403f 357 Pfam PF14870 Photosynthesis system II assembly factor YCF48 138 264 6.4E-18 T 13-09-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain PMA3_RS18320 9974c23932cef5f4845ad50e5419dbd3 399 Gene3D G3DSA:3.40.50.10540 6 220 6.6E-97 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS18320 9974c23932cef5f4845ad50e5419dbd3 399 Gene3D G3DSA:3.40.50.10540 311 399 6.6E-97 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS18320 9974c23932cef5f4845ad50e5419dbd3 399 Pfam PF02515 CoA-transferase family III 9 376 4.6E-105 T 13-09-2016 IPR003673 CoA-transferase family III GO:0003824 PMA3_RS18320 9974c23932cef5f4845ad50e5419dbd3 399 Gene3D G3DSA:3.30.1540.10 226 310 2.3E-20 T 13-09-2016 PMA3_RS18320 9974c23932cef5f4845ad50e5419dbd3 399 SUPERFAMILY SSF89796 7 399 1.83E-118 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS18320 9974c23932cef5f4845ad50e5419dbd3 399 PANTHER PTHR24023 249 386 3.4E-21 T 13-09-2016 PMA3_RS18320 9974c23932cef5f4845ad50e5419dbd3 399 PANTHER PTHR24023 85 223 3.4E-21 T 13-09-2016 PMA3_RS18320 9974c23932cef5f4845ad50e5419dbd3 399 PANTHER PTHR24023:SF593 249 386 3.4E-21 T 13-09-2016 PMA3_RS18320 9974c23932cef5f4845ad50e5419dbd3 399 PANTHER PTHR24023:SF593 85 223 3.4E-21 T 13-09-2016 PMA3_RS10150 b3239af4562a4d4ba7688f13c871a7f2 324 Hamap MF_01818 Ribonuclease BN [rbn]. 1 309 33.529 T 13-09-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 PMA3_RS10150 b3239af4562a4d4ba7688f13c871a7f2 324 SUPERFAMILY SSF56281 1 310 1.44E-61 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS10150 b3239af4562a4d4ba7688f13c871a7f2 324 Gene3D G3DSA:3.60.15.10 1 155 6.1E-66 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS10150 b3239af4562a4d4ba7688f13c871a7f2 324 Gene3D G3DSA:3.60.15.10 193 322 6.1E-66 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS10150 b3239af4562a4d4ba7688f13c871a7f2 324 Pfam PF00753 Metallo-beta-lactamase superfamily 24 145 1.3E-10 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS10150 b3239af4562a4d4ba7688f13c871a7f2 324 PANTHER PTHR12553 1 150 1.5E-59 T 13-09-2016 PMA3_RS10150 b3239af4562a4d4ba7688f13c871a7f2 324 PANTHER PTHR12553 180 324 1.5E-59 T 13-09-2016 PMA3_RS22540 95e994cc14081093ad500d9c0d642106 195 PANTHER PTHR38104 1 195 4.8E-40 T 13-09-2016 PMA3_RS22540 95e994cc14081093ad500d9c0d642106 195 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 7 74 8.2E-13 T 13-09-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 PMA3_RS22540 95e994cc14081093ad500d9c0d642106 195 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 125 177 2.7E-12 T 13-09-2016 IPR005573 Anti sigma-E protein RseA, C-terminal PMA3_RS22540 95e994cc14081093ad500d9c0d642106 195 SUPERFAMILY SSF89069 6 71 1.15E-12 T 13-09-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 PMA3_RS10545 c1662cabc66074bd08b89d21331ee4ae 512 PANTHER PTHR35565 1 42 0.0 T 13-09-2016 PMA3_RS10545 c1662cabc66074bd08b89d21331ee4ae 512 PANTHER PTHR35565 60 512 0.0 T 13-09-2016 PMA3_RS10545 c1662cabc66074bd08b89d21331ee4ae 512 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 87 508 2.9E-170 T 13-09-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PMA3_RS10545 c1662cabc66074bd08b89d21331ee4ae 512 PANTHER PTHR35565:SF1 1 42 0.0 T 13-09-2016 PMA3_RS10545 c1662cabc66074bd08b89d21331ee4ae 512 PANTHER PTHR35565:SF1 60 512 0.0 T 13-09-2016 PMA3_RS10545 c1662cabc66074bd08b89d21331ee4ae 512 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 44 508 1.4E-203 T 13-09-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PMA3_RS06205 d6cf97e564e4e42848d7665ce9e0c7f1 196 PANTHER PTHR19136 1 194 4.6E-19 T 13-09-2016 PMA3_RS06205 d6cf97e564e4e42848d7665ce9e0c7f1 196 PANTHER PTHR19136:SF78 1 194 4.6E-19 T 13-09-2016 PMA3_RS06205 d6cf97e564e4e42848d7665ce9e0c7f1 196 Gene3D G3DSA:3.90.550.10 4 193 1.2E-23 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS06205 d6cf97e564e4e42848d7665ce9e0c7f1 196 Pfam PF12804 MobA-like NTP transferase domain 7 171 6.3E-28 T 13-09-2016 IPR025877 MobA-like NTP transferase PMA3_RS06205 d6cf97e564e4e42848d7665ce9e0c7f1 196 SUPERFAMILY SSF53448 5 193 5.16E-22 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS05825 557254b3dd3ac6dd353c8358dbfd0290 237 Gene3D G3DSA:1.10.10.10 134 233 2.8E-30 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05825 557254b3dd3ac6dd353c8358dbfd0290 237 SMART SM00862 154 230 1.0E-24 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS05825 557254b3dd3ac6dd353c8358dbfd0290 237 SUPERFAMILY SSF46894 135 232 2.83E-27 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS05825 557254b3dd3ac6dd353c8358dbfd0290 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 1.5E-23 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS05825 557254b3dd3ac6dd353c8358dbfd0290 237 PANTHER PTHR26402:SF514 6 233 9.2E-123 T 13-09-2016 PMA3_RS05825 557254b3dd3ac6dd353c8358dbfd0290 237 Pfam PF00072 Response regulator receiver domain 8 117 3.9E-24 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS05825 557254b3dd3ac6dd353c8358dbfd0290 237 PANTHER PTHR26402 6 233 9.2E-123 T 13-09-2016 PMA3_RS05825 557254b3dd3ac6dd353c8358dbfd0290 237 SUPERFAMILY SSF52172 6 134 3.13E-38 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS05825 557254b3dd3ac6dd353c8358dbfd0290 237 Gene3D G3DSA:3.40.50.2300 3 124 3.0E-36 T 13-09-2016 PMA3_RS05825 557254b3dd3ac6dd353c8358dbfd0290 237 SMART SM00448 6 116 1.8E-36 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS19905 6dc7b148976c6195a4da70f0edd50f93 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 343 5.0E-28 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS19905 6dc7b148976c6195a4da70f0edd50f93 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 156 6.6E-20 T 13-09-2016 IPR016188 PurM-like, N-terminal domain PMA3_RS19905 6dc7b148976c6195a4da70f0edd50f93 344 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 311 1.2E-133 T 13-09-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PMA3_RS19905 6dc7b148976c6195a4da70f0edd50f93 344 SUPERFAMILY SSF55326 6 159 9.72E-39 T 13-09-2016 PMA3_RS19905 6dc7b148976c6195a4da70f0edd50f93 344 SUPERFAMILY SSF56042 163 337 4.49E-50 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS19905 6dc7b148976c6195a4da70f0edd50f93 344 PANTHER PTHR10256 1 340 2.4E-146 T 13-09-2016 PMA3_RS19905 6dc7b148976c6195a4da70f0edd50f93 344 Gene3D G3DSA:3.30.1330.10 38 161 1.3E-30 T 13-09-2016 IPR016188 PurM-like, N-terminal domain PMA3_RS19905 6dc7b148976c6195a4da70f0edd50f93 344 Hamap MF_00625 Selenide, water dikinase [selD]. 4 344 44.574 T 13-09-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PMA3_RS19905 6dc7b148976c6195a4da70f0edd50f93 344 Gene3D G3DSA:3.90.650.10 175 342 6.3E-16 T 13-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain PMA3_RS19905 6dc7b148976c6195a4da70f0edd50f93 344 PIRSF PIRSF036407 1 344 9.0E-114 T 13-09-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PMA3_RS13465 38adb8c7297f38bdb3f153e35c01f1da 324 SUPERFAMILY SSF111369 42 233 1.57E-16 T 13-09-2016 PMA3_RS13465 38adb8c7297f38bdb3f153e35c01f1da 324 PANTHER PTHR30367:SF5 8 313 2.6E-131 T 13-09-2016 PMA3_RS13465 38adb8c7297f38bdb3f153e35c01f1da 324 Gene3D G3DSA:2.40.50.100 179 212 1.4E-17 T 13-09-2016 PMA3_RS13465 38adb8c7297f38bdb3f153e35c01f1da 324 Gene3D G3DSA:2.40.50.100 43 76 1.4E-17 T 13-09-2016 PMA3_RS13465 38adb8c7297f38bdb3f153e35c01f1da 324 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 254 8.2E-15 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS13465 38adb8c7297f38bdb3f153e35c01f1da 324 PANTHER PTHR30367 8 313 2.6E-131 T 13-09-2016 PMA3_RS29230 1a4d36450bad2809ae23b036b85a1c22 255 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 243 2.0E-36 T 13-09-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS29230 1a4d36450bad2809ae23b036b85a1c22 255 Gene3D G3DSA:3.40.50.10090 131 250 6.7E-12 T 13-09-2016 PMA3_RS29230 1a4d36450bad2809ae23b036b85a1c22 255 PANTHER PTHR38042 1 254 8.5E-64 T 13-09-2016 PMA3_RS29230 1a4d36450bad2809ae23b036b85a1c22 255 Gene3D G3DSA:3.40.50.10090 8 118 1.2E-12 T 13-09-2016 PMA3_RS29230 1a4d36450bad2809ae23b036b85a1c22 255 PANTHER PTHR38042:SF1 1 254 8.5E-64 T 13-09-2016 PMA3_RS29230 1a4d36450bad2809ae23b036b85a1c22 255 SUPERFAMILY SSF69618 3 249 9.94E-54 T 13-09-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PMA3_RS05340 e309ba93e8c12668c7050f6cf8d4d7f3 298 PIRSF PIRSF000103 4 298 7.6E-70 T 13-09-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PMA3_RS05340 e309ba93e8c12668c7050f6cf8d4d7f3 298 PANTHER PTHR22981:SF48 1 293 1.2E-148 T 13-09-2016 PMA3_RS05340 e309ba93e8c12668c7050f6cf8d4d7f3 298 SUPERFAMILY SSF51735 8 167 5.21E-43 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS05340 e309ba93e8c12668c7050f6cf8d4d7f3 298 Gene3D G3DSA:3.40.50.720 8 171 7.1E-57 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS05340 e309ba93e8c12668c7050f6cf8d4d7f3 298 Gene3D G3DSA:1.10.1040.10 172 293 9.3E-29 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS05340 e309ba93e8c12668c7050f6cf8d4d7f3 298 SUPERFAMILY SSF48179 169 293 4.08E-27 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS05340 e309ba93e8c12668c7050f6cf8d4d7f3 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 167 2.0E-47 T 13-09-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PMA3_RS05340 e309ba93e8c12668c7050f6cf8d4d7f3 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 291 1.6E-24 T 13-09-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PMA3_RS05340 e309ba93e8c12668c7050f6cf8d4d7f3 298 PANTHER PTHR22981 1 293 1.2E-148 T 13-09-2016 PMA3_RS03055 46f8524acc15ed06e3205be33bdea852 121 Gene3D G3DSA:2.40.10.220 2 120 3.0E-43 T 13-09-2016 PMA3_RS03055 46f8524acc15ed06e3205be33bdea852 121 Pfam PF07238 PilZ domain 6 102 1.6E-11 T 13-09-2016 IPR009875 PilZ domain GO:0035438 PMA3_RS03055 46f8524acc15ed06e3205be33bdea852 121 PIRSF PIRSF028141 3 121 3.9E-39 T 13-09-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type PMA3_RS03055 46f8524acc15ed06e3205be33bdea852 121 SUPERFAMILY SSF141371 2 120 3.06E-32 T 13-09-2016 PMA3_RS26775 2b8dc5430d9592ed0483e01402f20845 165 PANTHER PTHR30471 26 165 1.1E-45 T 13-09-2016 PMA3_RS26775 2b8dc5430d9592ed0483e01402f20845 165 Pfam PF04002 RadC-like JAB domain 45 163 6.4E-31 T 13-09-2016 IPR025657 RadC-like JAB domain PMA3_RS26775 2b8dc5430d9592ed0483e01402f20845 165 Gene3D G3DSA:3.40.140.10 42 165 3.3E-33 T 13-09-2016 PMA3_RS26775 2b8dc5430d9592ed0483e01402f20845 165 PANTHER PTHR30471:SF5 26 165 1.1E-45 T 13-09-2016 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 SUPERFAMILY SSF50104 121 177 3.76E-19 T 13-09-2016 IPR008991 Translation protein SH3-like domain PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 1.6E-68 T 13-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 SMART SM00739 123 150 2.2E-6 T 13-09-2016 IPR005824 KOW PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 PANTHER PTHR30265 1 177 1.4E-83 T 13-09-2016 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 Gene3D G3DSA:2.30.30.30 116 177 5.7E-31 T 13-09-2016 IPR014722 Ribosomal protein L2 domain 2 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 SUPERFAMILY SSF82679 3 114 1.57E-39 T 13-09-2016 IPR006645 NusG, N-terminal GO:0006355 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 2.0E-20 T 13-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 2.0E-20 T 13-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 2.0E-20 T 13-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 Pfam PF00467 KOW motif 126 156 2.4E-8 T 13-09-2016 IPR005824 KOW PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 25.124 T 13-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 SMART SM00738 2 111 1.1E-48 T 13-09-2016 IPR006645 NusG, N-terminal GO:0006355 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 Gene3D G3DSA:3.30.70.940 3 113 3.3E-44 T 13-09-2016 IPR006645 NusG, N-terminal GO:0006355 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 Pfam PF02357 Transcription termination factor nusG 3 108 1.8E-28 T 13-09-2016 IPR006645 NusG, N-terminal GO:0006355 PMA3_RS27325 f2d63afe64785f464bbeb597d76da17b 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 13-09-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site PMA3_RS18250 50dbb013cbc280f8ab0cd0c82b1eccbb 200 Pfam PF13699 Domain of unknown function (DUF4157) 81 161 2.0E-12 T 13-09-2016 IPR025295 Domain of unknown function DUF4157 PMA3_RS22880 05649c845d283735aa2fe90dd16f53ef 364 PANTHER PTHR22935 49 362 1.1E-57 T 13-09-2016 PMA3_RS22880 05649c845d283735aa2fe90dd16f53ef 364 PANTHER PTHR22935:SF10 49 362 1.1E-57 T 13-09-2016 PMA3_RS22880 05649c845d283735aa2fe90dd16f53ef 364 SUPERFAMILY SSF56601 7 355 9.15E-69 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS22880 05649c845d283735aa2fe90dd16f53ef 364 Pfam PF00144 Beta-lactamase 53 336 5.1E-29 T 13-09-2016 IPR001466 Beta-lactamase-related PMA3_RS22880 05649c845d283735aa2fe90dd16f53ef 364 Gene3D G3DSA:3.40.710.10 55 339 6.9E-36 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS30000 17bbb9d12dbb5c16aa0a99931fb304e2 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 2.1E-42 T 13-09-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30000 17bbb9d12dbb5c16aa0a99931fb304e2 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 5.0E-37 T 13-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30000 17bbb9d12dbb5c16aa0a99931fb304e2 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 132 2.0E-6 T 13-09-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain PMA3_RS30000 17bbb9d12dbb5c16aa0a99931fb304e2 141 Gene3D G3DSA:1.20.5.440 92 134 8.0E-15 T 13-09-2016 PMA3_RS30000 17bbb9d12dbb5c16aa0a99931fb304e2 141 SUPERFAMILY SSF46604 89 137 1.94E-10 T 13-09-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain PMA3_RS30000 17bbb9d12dbb5c16aa0a99931fb304e2 141 PANTHER PTHR13822 1 140 3.6E-37 T 13-09-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30000 17bbb9d12dbb5c16aa0a99931fb304e2 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.3E-29 T 13-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30000 17bbb9d12dbb5c16aa0a99931fb304e2 141 SUPERFAMILY SSF51344 3 86 7.85E-24 T 13-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30000 17bbb9d12dbb5c16aa0a99931fb304e2 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 19.368 T 13-09-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS30000 17bbb9d12dbb5c16aa0a99931fb304e2 141 Gene3D G3DSA:2.60.15.10 3 91 1.0E-27 T 13-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PMA3_RS16000 64c986934cd181e9d42cff20dccfc49a 255 Gene3D G3DSA:3.40.190.10 118 214 5.0E-38 T 13-09-2016 PMA3_RS16000 64c986934cd181e9d42cff20dccfc49a 255 PANTHER PTHR30632:SF0 9 254 3.9E-46 T 13-09-2016 PMA3_RS16000 64c986934cd181e9d42cff20dccfc49a 255 PANTHER PTHR30632 9 254 3.9E-46 T 13-09-2016 PMA3_RS16000 64c986934cd181e9d42cff20dccfc49a 255 SUPERFAMILY SSF53850 29 253 6.21E-63 T 13-09-2016 PMA3_RS16000 64c986934cd181e9d42cff20dccfc49a 255 PIRSF PIRSF004846 1 255 3.4E-57 T 13-09-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 PMA3_RS16000 64c986934cd181e9d42cff20dccfc49a 255 Gene3D G3DSA:3.40.190.10 215 254 4.8E-13 T 13-09-2016 PMA3_RS16000 64c986934cd181e9d42cff20dccfc49a 255 Gene3D G3DSA:3.40.190.10 28 117 4.8E-13 T 13-09-2016 PMA3_RS16000 64c986934cd181e9d42cff20dccfc49a 255 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 35 252 2.5E-80 T 13-09-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 PMA3_RS16000 64c986934cd181e9d42cff20dccfc49a 255 Pfam PF13531 Bacterial extracellular solute-binding protein 31 254 2.4E-46 T 13-09-2016 PMA3_RS22865 1509573d86f9eabfe9cffb7833d80c4b 385 SUPERFAMILY SSF56024 6 173 1.79E-39 T 13-09-2016 PMA3_RS22865 1509573d86f9eabfe9cffb7833d80c4b 385 PANTHER PTHR21248:SF5 1 384 8.2E-95 T 13-09-2016 PMA3_RS22865 1509573d86f9eabfe9cffb7833d80c4b 385 PANTHER PTHR21248 1 384 8.2E-95 T 13-09-2016 PMA3_RS22865 1509573d86f9eabfe9cffb7833d80c4b 385 Gene3D G3DSA:3.30.870.10 6 191 6.5E-37 T 13-09-2016 PMA3_RS22865 1509573d86f9eabfe9cffb7833d80c4b 385 Pfam PF13091 PLD-like domain 217 344 2.4E-25 T 13-09-2016 IPR025202 Phospholipase D-like domain PMA3_RS22865 1509573d86f9eabfe9cffb7833d80c4b 385 Pfam PF13091 PLD-like domain 30 169 1.2E-12 T 13-09-2016 IPR025202 Phospholipase D-like domain PMA3_RS22865 1509573d86f9eabfe9cffb7833d80c4b 385 Gene3D G3DSA:3.30.870.10 210 354 2.1E-31 T 13-09-2016 PMA3_RS22865 1509573d86f9eabfe9cffb7833d80c4b 385 SUPERFAMILY SSF56024 190 364 5.61E-37 T 13-09-2016 PMA3_RS17320 8963235635f5756d29d62dfab4cfc859 240 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 81 2.1E-6 T 13-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PMA3_RS17320 8963235635f5756d29d62dfab4cfc859 240 PIRSF PIRSF000851 3 238 1.6E-87 T 13-09-2016 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 PMA3_RS23380 9c4cf373861c3099a7842253f961db57 373 Gene3D G3DSA:3.40.50.2000 168 328 3.0E-23 T 13-09-2016 PMA3_RS23380 9c4cf373861c3099a7842253f961db57 373 SUPERFAMILY SSF53756 7 365 5.07E-68 T 13-09-2016 PMA3_RS23380 9c4cf373861c3099a7842253f961db57 373 PANTHER PTHR12526 70 367 1.6E-51 T 13-09-2016 PMA3_RS23380 9c4cf373861c3099a7842253f961db57 373 Pfam PF13439 Glycosyltransferase Family 4 18 179 1.2E-19 T 13-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PMA3_RS23380 9c4cf373861c3099a7842253f961db57 373 Pfam PF00534 Glycosyl transferases group 1 191 339 8.5E-22 T 13-09-2016 IPR001296 Glycosyl transferase, family 1 PMA3_RS03490 cce704b0a3512c92edc32899bea5b432 146 PRINTS PR00618 DksA/TraR zinc finger signature 109 120 6.1E-5 T 13-09-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PMA3_RS03490 cce704b0a3512c92edc32899bea5b432 146 PRINTS PR00618 DksA/TraR zinc finger signature 121 133 6.1E-5 T 13-09-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PMA3_RS03490 cce704b0a3512c92edc32899bea5b432 146 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 109 133 - T 13-09-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PMA3_RS03490 cce704b0a3512c92edc32899bea5b432 146 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 27 135 7.8E-51 T 13-09-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PMA3_RS03490 cce704b0a3512c92edc32899bea5b432 146 PANTHER PTHR33823 3 146 2.8E-63 T 13-09-2016 PMA3_RS03490 cce704b0a3512c92edc32899bea5b432 146 SUPERFAMILY SSF109635 11 104 4.71E-33 T 13-09-2016 PMA3_RS03490 cce704b0a3512c92edc32899bea5b432 146 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 23 145 29.904 T 13-09-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PMA3_RS03490 cce704b0a3512c92edc32899bea5b432 146 SUPERFAMILY SSF57716 106 144 2.0E-10 T 13-09-2016 PMA3_RS03490 cce704b0a3512c92edc32899bea5b432 146 PANTHER PTHR33823:SF2 3 146 2.8E-63 T 13-09-2016 PMA3_RS03490 cce704b0a3512c92edc32899bea5b432 146 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 106 138 2.9E-10 T 13-09-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 Gene3D G3DSA:3.40.190.10 84 185 2.7E-13 T 13-09-2016 PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 PANTHER PTHR30126:SF29 1 284 7.8E-94 T 13-09-2016 PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.2E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.2E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.2E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 SUPERFAMILY SSF46785 5 88 1.26E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 Gene3D G3DSA:1.10.10.10 7 83 5.5E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 PANTHER PTHR30126 1 284 7.8E-94 T 13-09-2016 PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 SUPERFAMILY SSF53850 88 283 5.32E-26 T 13-09-2016 PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.3E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 Gene3D G3DSA:3.40.190.10 186 250 1.0E-4 T 13-09-2016 PMA3_RS05485 847fb4b0d0c340201e45b43f4b1db53e 284 Pfam PF03466 LysR substrate binding domain 88 279 2.5E-22 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS18275 a7dfe9384853a5675fffb96453d1d127 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.1E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18275 a7dfe9384853a5675fffb96453d1d127 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.1E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18275 a7dfe9384853a5675fffb96453d1d127 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 1.1E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18275 a7dfe9384853a5675fffb96453d1d127 276 PANTHER PTHR10992:SF859 1 276 1.2E-127 T 13-09-2016 PMA3_RS18275 a7dfe9384853a5675fffb96453d1d127 276 Pfam PF00561 alpha/beta hydrolase fold 24 256 1.5E-23 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18275 a7dfe9384853a5675fffb96453d1d127 276 Gene3D G3DSA:3.40.50.1820 3 275 1.3E-74 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18275 a7dfe9384853a5675fffb96453d1d127 276 PANTHER PTHR10992 1 276 1.2E-127 T 13-09-2016 PMA3_RS18275 a7dfe9384853a5675fffb96453d1d127 276 SUPERFAMILY SSF53474 1 275 7.9E-65 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS25400 3551c119323a5c1813c02644c201793b 771 PANTHER PTHR32552:SF8 14 55 1.9E-236 T 13-09-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 PMA3_RS25400 3551c119323a5c1813c02644c201793b 771 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 177 1.8E-19 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS25400 3551c119323a5c1813c02644c201793b 771 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 81 771 6.4E-88 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS25400 3551c119323a5c1813c02644c201793b 771 SUPERFAMILY SSF56935 59 771 9.16E-131 T 13-09-2016 PMA3_RS25400 3551c119323a5c1813c02644c201793b 771 Gene3D G3DSA:2.170.130.10 59 185 8.8E-32 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS25400 3551c119323a5c1813c02644c201793b 771 PANTHER PTHR32552 71 771 1.9E-236 T 13-09-2016 PMA3_RS25400 3551c119323a5c1813c02644c201793b 771 Gene3D G3DSA:2.40.170.20 195 771 5.2E-158 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS25400 3551c119323a5c1813c02644c201793b 771 Pfam PF00593 TonB dependent receptor 523 768 3.4E-38 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS25400 3551c119323a5c1813c02644c201793b 771 PANTHER PTHR32552:SF8 71 771 1.9E-236 T 13-09-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 PMA3_RS25400 3551c119323a5c1813c02644c201793b 771 PANTHER PTHR32552 14 55 1.9E-236 T 13-09-2016 PMA3_RS04745 a90f9c0d2f2521bf5669d6a00fe2c244 115 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 6 96 6.2E-22 T 13-09-2016 PMA3_RS04745 a90f9c0d2f2521bf5669d6a00fe2c244 115 PANTHER PTHR38013 3 99 3.7E-19 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 337 1.2E-60 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 4.3E-14 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 4.3E-14 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 4.3E-14 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.3E-14 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 Gene3D G3DSA:3.50.50.60 118 344 7.5E-34 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.7E-8 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.7E-8 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 1.7E-8 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 Gene3D G3DSA:3.50.50.60 2 117 1.8E-17 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 PANTHER PTHR22912 168 190 1.6E-22 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 PANTHER PTHR22912 1 147 1.6E-22 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 PANTHER PTHR22912 206 344 1.6E-22 T 13-09-2016 PMA3_RS03335 21ff7a9fa56a96a7092b0263889dec85 432 SUPERFAMILY SSF51905 2 341 2.2E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS29110 373f912b8678329c234151cdff898a2c 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 108 3.2E-37 T 13-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PMA3_RS29110 373f912b8678329c234151cdff898a2c 109 SUPERFAMILY SSF52833 6 107 6.71E-38 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS29110 373f912b8678329c234151cdff898a2c 109 PIRSF PIRSF000077 3 109 4.0E-44 T 13-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PMA3_RS29110 373f912b8678329c234151cdff898a2c 109 ProSitePatterns PS00194 Thioredoxin family active site. 26 44 - T 13-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PMA3_RS29110 373f912b8678329c234151cdff898a2c 109 Gene3D G3DSA:3.40.30.10 3 108 7.2E-38 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS29110 373f912b8678329c234151cdff898a2c 109 Pfam PF00085 Thioredoxin 6 107 1.7E-34 T 13-09-2016 IPR013766 Thioredoxin domain GO:0045454 PMA3_RS29110 373f912b8678329c234151cdff898a2c 109 PANTHER PTHR10438 1 109 1.6E-38 T 13-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PMA3_RS29110 373f912b8678329c234151cdff898a2c 109 PRINTS PR00421 Thioredoxin family signature 25 33 6.3E-10 T 13-09-2016 PMA3_RS29110 373f912b8678329c234151cdff898a2c 109 PRINTS PR00421 Thioredoxin family signature 33 42 6.3E-10 T 13-09-2016 PMA3_RS29110 373f912b8678329c234151cdff898a2c 109 PRINTS PR00421 Thioredoxin family signature 73 84 6.3E-10 T 13-09-2016 PMA3_RS27535 f3f5f68405a8c72a3b4528d95e82a790 255 SUPERFAMILY SSF46565 152 249 3.4E-16 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS27535 f3f5f68405a8c72a3b4528d95e82a790 255 Gene3D G3DSA:1.10.3680.10 21 174 7.6E-13 T 13-09-2016 IPR029024 TerB-like PMA3_RS27535 f3f5f68405a8c72a3b4528d95e82a790 255 Pfam PF05099 Tellurite resistance protein TerB 60 167 2.8E-11 T 13-09-2016 IPR007791 Co-chaperone DjlA, N-terminal PMA3_RS27535 f3f5f68405a8c72a3b4528d95e82a790 255 PRINTS PR00625 DnaJ domain signature 209 224 4.3E-8 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS27535 f3f5f68405a8c72a3b4528d95e82a790 255 PRINTS PR00625 DnaJ domain signature 191 209 4.3E-8 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS27535 f3f5f68405a8c72a3b4528d95e82a790 255 PRINTS PR00625 DnaJ domain signature 233 253 4.3E-8 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS27535 f3f5f68405a8c72a3b4528d95e82a790 255 Gene3D G3DSA:1.10.287.110 186 248 8.4E-12 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS27535 f3f5f68405a8c72a3b4528d95e82a790 255 Pfam PF00226 DnaJ domain 193 248 1.7E-8 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS27535 f3f5f68405a8c72a3b4528d95e82a790 255 SMART SM00271 188 253 5.3E-9 T 13-09-2016 IPR001623 DnaJ domain PMA3_RS27535 f3f5f68405a8c72a3b4528d95e82a790 255 SUPERFAMILY SSF158682 21 175 7.85E-15 T 13-09-2016 IPR029024 TerB-like PMA3_RS25235 7f93d2f5417b2565a0377aaf92150787 126 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 117 5.7E-27 T 13-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS25235 7f93d2f5417b2565a0377aaf92150787 126 Gene3D G3DSA:1.20.1290.10 5 123 3.2E-38 T 13-09-2016 IPR029032 AhpD-like PMA3_RS25235 7f93d2f5417b2565a0377aaf92150787 126 PANTHER PTHR33570:SF2 8 126 3.5E-55 T 13-09-2016 PMA3_RS25235 7f93d2f5417b2565a0377aaf92150787 126 PANTHER PTHR33570 8 126 3.5E-55 T 13-09-2016 PMA3_RS25235 7f93d2f5417b2565a0377aaf92150787 126 SUPERFAMILY SSF69118 5 120 8.77E-40 T 13-09-2016 IPR029032 AhpD-like PMA3_RS13575 77ead5a55195c8c5befb2241ec827130 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.7E-20 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS13575 77ead5a55195c8c5befb2241ec827130 219 PANTHER PTHR26402 1 217 2.2E-79 T 13-09-2016 PMA3_RS13575 77ead5a55195c8c5befb2241ec827130 219 Gene3D G3DSA:3.40.50.2300 1 123 1.5E-34 T 13-09-2016 PMA3_RS13575 77ead5a55195c8c5befb2241ec827130 219 PANTHER PTHR26402:SF518 1 217 2.2E-79 T 13-09-2016 PMA3_RS13575 77ead5a55195c8c5befb2241ec827130 219 Gene3D G3DSA:1.10.10.10 124 217 7.1E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13575 77ead5a55195c8c5befb2241ec827130 219 SUPERFAMILY SSF52172 1 179 3.17E-35 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS13575 77ead5a55195c8c5befb2241ec827130 219 SMART SM00862 145 216 6.6E-25 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS13575 77ead5a55195c8c5befb2241ec827130 219 SMART SM00448 1 112 3.8E-31 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS13575 77ead5a55195c8c5befb2241ec827130 219 Pfam PF00072 Response regulator receiver domain 3 112 4.8E-23 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS26890 c8011f5ad2bcd69812ce4ce1be4772b8 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 49 2.0E-20 T 13-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PMA3_RS26890 c8011f5ad2bcd69812ce4ce1be4772b8 80 Pfam PF02609 Exonuclease VII small subunit 10 60 2.4E-20 T 13-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PMA3_RS26890 c8011f5ad2bcd69812ce4ce1be4772b8 80 SUPERFAMILY SSF116842 3 69 1.29E-20 T 13-09-2016 PMA3_RS26890 c8011f5ad2bcd69812ce4ce1be4772b8 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 64 3.1E-22 T 13-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PMA3_RS26890 c8011f5ad2bcd69812ce4ce1be4772b8 80 Gene3D G3DSA:1.10.287.1040 4 76 8.1E-28 T 13-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PMA3_RS26890 c8011f5ad2bcd69812ce4ce1be4772b8 80 PIRSF PIRSF006488 1 80 2.5E-22 T 13-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PMA3_RS26890 c8011f5ad2bcd69812ce4ce1be4772b8 80 PANTHER PTHR34137 1 77 1.2E-25 T 13-09-2016 PMA3_RS26890 c8011f5ad2bcd69812ce4ce1be4772b8 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 15.728 T 13-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 Gene3D G3DSA:3.40.50.1820 2 267 4.7E-53 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 PANTHER PTHR10992 1 268 3.6E-81 T 13-09-2016 PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 Pfam PF12697 Alpha/beta hydrolase family 22 258 7.8E-18 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 SUPERFAMILY SSF53474 1 267 7.08E-57 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 PRINTS PR00412 Epoxide hydrolase signature 243 265 2.6E-6 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 PRINTS PR00412 Epoxide hydrolase signature 45 60 2.6E-6 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 PRINTS PR00412 Epoxide hydrolase signature 94 107 2.6E-6 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 2.4E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 2.4E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 2.4E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.4E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS07270 fff7ebaffbb5dc6e26c783788af1ff1a 270 PANTHER PTHR10992:SF885 1 268 3.6E-81 T 13-09-2016 PMA3_RS15990 ed48c1d5fae9a6e1f2e4a7e9096155a9 354 PANTHER PTHR32332:SF12 4 84 8.5E-126 T 13-09-2016 PMA3_RS15990 ed48c1d5fae9a6e1f2e4a7e9096155a9 354 PANTHER PTHR32332:SF12 113 346 8.5E-126 T 13-09-2016 PMA3_RS15990 ed48c1d5fae9a6e1f2e4a7e9096155a9 354 SUPERFAMILY SSF51412 7 314 1.05E-69 T 13-09-2016 PMA3_RS15990 ed48c1d5fae9a6e1f2e4a7e9096155a9 354 Pfam PF03060 Nitronate monooxygenase 8 344 5.3E-75 T 13-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PMA3_RS15990 ed48c1d5fae9a6e1f2e4a7e9096155a9 354 Gene3D G3DSA:3.20.20.70 7 296 1.7E-68 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS15990 ed48c1d5fae9a6e1f2e4a7e9096155a9 354 PANTHER PTHR32332 4 84 8.5E-126 T 13-09-2016 PMA3_RS15990 ed48c1d5fae9a6e1f2e4a7e9096155a9 354 PANTHER PTHR32332 113 346 8.5E-126 T 13-09-2016 PMA3_RS05205 4d5761734780ad9bb803c818f2a10f52 164 Pfam PF03168 Late embryogenesis abundant protein 56 150 1.6E-14 T 13-09-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 PMA3_RS05205 4d5761734780ad9bb803c818f2a10f52 164 SMART SM00769 35 154 5.8E-12 T 13-09-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 PMA3_RS05205 4d5761734780ad9bb803c818f2a10f52 164 SUPERFAMILY SSF117070 12 152 1.7E-23 T 13-09-2016 PMA3_RS05205 4d5761734780ad9bb803c818f2a10f52 164 Gene3D G3DSA:2.60.40.10 33 139 1.0E-8 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS20230 f6692736c0f70560c08116ee5f3d67f8 231 PANTHER PTHR11019 4 159 2.3E-38 T 13-09-2016 PMA3_RS20230 f6692736c0f70560c08116ee5f3d67f8 231 PANTHER PTHR11019:SF25 4 159 2.3E-38 T 13-09-2016 PMA3_RS20230 f6692736c0f70560c08116ee5f3d67f8 231 Gene3D G3DSA:3.40.50.880 4 207 6.0E-69 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS20230 f6692736c0f70560c08116ee5f3d67f8 231 SUPERFAMILY SSF52317 4 183 2.95E-52 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS20230 f6692736c0f70560c08116ee5f3d67f8 231 Pfam PF01965 DJ-1/PfpI family 5 164 5.6E-31 T 13-09-2016 IPR002818 DJ-1/PfpI PMA3_RS15320 37b695a121150363a4f480cb70ca4413 289 Pfam PF01694 Rhomboid family 137 279 2.3E-27 T 13-09-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PMA3_RS15320 37b695a121150363a4f480cb70ca4413 289 PANTHER PTHR22936 126 287 1.6E-44 T 13-09-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 PMA3_RS15320 37b695a121150363a4f480cb70ca4413 289 PANTHER PTHR22936 79 103 1.6E-44 T 13-09-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 PMA3_RS15320 37b695a121150363a4f480cb70ca4413 289 Gene3D G3DSA:1.20.1540.10 90 277 2.2E-28 T 13-09-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PMA3_RS15320 37b695a121150363a4f480cb70ca4413 289 PANTHER PTHR22936:SF30 126 287 1.6E-44 T 13-09-2016 PMA3_RS15320 37b695a121150363a4f480cb70ca4413 289 PANTHER PTHR22936:SF30 79 103 1.6E-44 T 13-09-2016 PMA3_RS15320 37b695a121150363a4f480cb70ca4413 289 Pfam PF16733 Rhomboid N-terminal domain 1 66 2.9E-30 T 13-09-2016 IPR031976 Rhomboid protease, N-terminal PMA3_RS15320 37b695a121150363a4f480cb70ca4413 289 SUPERFAMILY SSF144091 84 285 6.28E-33 T 13-09-2016 PMA3_RS07035 5ea045b7194ef6bf6daf10cbaaf4ad43 266 PANTHER PTHR30193:SF20 1 266 2.3E-58 T 13-09-2016 PMA3_RS07035 5ea045b7194ef6bf6daf10cbaaf4ad43 266 PANTHER PTHR30193 1 266 2.3E-58 T 13-09-2016 PMA3_RS07035 5ea045b7194ef6bf6daf10cbaaf4ad43 266 SUPERFAMILY SSF161098 12 261 4.19E-42 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS07035 5ea045b7194ef6bf6daf10cbaaf4ad43 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 263 1.2E-14 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS07035 5ea045b7194ef6bf6daf10cbaaf4ad43 266 Gene3D G3DSA:1.10.3720.10 15 264 5.5E-41 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS21210 0453b6fe89d84520ea06d19e8d94c89a 150 Pfam PF03061 Thioesterase superfamily 61 133 1.7E-9 T 13-09-2016 IPR006683 Thioesterase domain PMA3_RS21210 0453b6fe89d84520ea06d19e8d94c89a 150 Gene3D G3DSA:3.10.129.10 21 144 1.1E-17 T 13-09-2016 IPR029069 HotDog domain PMA3_RS21210 0453b6fe89d84520ea06d19e8d94c89a 150 PANTHER PTHR12418 9 146 6.8E-49 T 13-09-2016 PMA3_RS21210 0453b6fe89d84520ea06d19e8d94c89a 150 SUPERFAMILY SSF54637 18 144 7.47E-21 T 13-09-2016 IPR029069 HotDog domain PMA3_RS21210 0453b6fe89d84520ea06d19e8d94c89a 150 PANTHER PTHR12418:SF18 9 146 6.8E-49 T 13-09-2016 PMA3_RS16480 d138f9704b430674962dcbbef1c326e5 525 Pfam PF00171 Aldehyde dehydrogenase family 18 457 9.1E-47 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16480 d138f9704b430674962dcbbef1c326e5 525 Gene3D G3DSA:3.40.309.10 266 453 2.7E-53 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS16480 d138f9704b430674962dcbbef1c326e5 525 SUPERFAMILY SSF53720 19 516 5.5E-99 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS16480 d138f9704b430674962dcbbef1c326e5 525 Gene3D G3DSA:3.40.605.10 7 264 4.2E-47 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16480 d138f9704b430674962dcbbef1c326e5 525 PANTHER PTHR11699:SF10 1 518 1.4E-163 T 13-09-2016 PMA3_RS16480 d138f9704b430674962dcbbef1c326e5 525 PANTHER PTHR11699 1 518 1.4E-163 T 13-09-2016 PMA3_RS12340 8f2fd518c9bf1a74acd04a6a6260cd40 405 SUPERFAMILY SSF51419 33 269 4.58E-29 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS12340 8f2fd518c9bf1a74acd04a6a6260cd40 405 Pfam PF14031 Putative serine dehydratase domain 292 386 8.5E-14 T 13-09-2016 IPR026956 D-serine dehydratase-like domain PMA3_RS12340 8f2fd518c9bf1a74acd04a6a6260cd40 405 Pfam PF01168 Alanine racemase, N-terminal domain 33 241 4.6E-12 T 13-09-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PMA3_RS12340 8f2fd518c9bf1a74acd04a6a6260cd40 405 PANTHER PTHR28004 22 401 1.6E-71 T 13-09-2016 PMA3_RS12340 8f2fd518c9bf1a74acd04a6a6260cd40 405 PANTHER PTHR28004:SF1 22 401 1.6E-71 T 13-09-2016 PMA3_RS12340 8f2fd518c9bf1a74acd04a6a6260cd40 405 SMART SM01119 292 392 7.5E-36 T 13-09-2016 IPR026956 D-serine dehydratase-like domain PMA3_RS12340 8f2fd518c9bf1a74acd04a6a6260cd40 405 Gene3D G3DSA:3.20.20.10 74 222 2.4E-9 T 13-09-2016 IPR029066 PLP-binding barrel PMA3_RS02920 e5105ed2c4464518197260c88772931e 319 SUPERFAMILY SSF53474 43 193 4.89E-12 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS02920 e5105ed2c4464518197260c88772931e 319 SUPERFAMILY SSF53474 230 304 4.89E-12 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS02920 e5105ed2c4464518197260c88772931e 319 Pfam PF12697 Alpha/beta hydrolase family 118 307 3.8E-6 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS02920 e5105ed2c4464518197260c88772931e 319 Gene3D G3DSA:3.40.50.1820 4 308 1.7E-51 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS02920 e5105ed2c4464518197260c88772931e 319 PANTHER PTHR35560 46 319 6.2E-72 T 13-09-2016 PMA3_RS02920 e5105ed2c4464518197260c88772931e 319 PANTHER PTHR35560:SF1 46 319 6.2E-72 T 13-09-2016 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 Gene3D G3DSA:3.30.70.260 352 422 7.1E-15 T 13-09-2016 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 13-09-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 Pfam PF00742 Homoserine dehydrogenase 135 313 9.6E-66 T 13-09-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 SUPERFAMILY SSF55021 351 422 1.37E-14 T 13-09-2016 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 PANTHER PTHR21499 4 367 6.2E-135 T 13-09-2016 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 PANTHER PTHR21499:SF2 4 367 6.2E-135 T 13-09-2016 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 PIRSF PIRSF000098 1 433 6.1E-166 T 13-09-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 Pfam PF01842 ACT domain 352 419 3.3E-14 T 13-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 SUPERFAMILY SSF51735 2 156 5.11E-36 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 3.7E-21 T 13-09-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 Gene3D G3DSA:3.30.360.10 147 296 6.4E-58 T 13-09-2016 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 SUPERFAMILY SSF55347 135 300 7.19E-54 T 13-09-2016 PMA3_RS04490 d310e16c0ad0c891f4d45ab89154634c 434 Gene3D G3DSA:3.40.50.720 2 146 2.8E-48 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 PANTHER PTHR10882:SF1 3 33 5.1E-30 T 13-09-2016 PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 PANTHER PTHR10882 3 33 5.1E-30 T 13-09-2016 PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 225 9.4E-30 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 TIGRFAM TIGR02434 CobF: precorrin-6A synthase (deacetylating) 2 250 1.6E-104 T 13-09-2016 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376|UniPathway: UPA00148 PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 Gene3D G3DSA:3.40.1010.10 1 143 1.6E-34 T 13-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 Gene3D G3DSA:3.30.950.10 144 250 2.4E-46 T 13-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 PANTHER PTHR10882:SF1 57 172 5.1E-30 T 13-09-2016 PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 PANTHER PTHR10882 57 172 5.1E-30 T 13-09-2016 PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 PIRSF PIRSF036525 1 251 4.9E-109 T 13-09-2016 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376|UniPathway: UPA00148 PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 SUPERFAMILY SSF53790 76 249 6.02E-36 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS17445 17a4594ee06dbe29c5b5c9aeb61fa22f 251 SUPERFAMILY SSF53790 1 35 6.02E-36 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 Pfam PF04715 Anthranilate synthase component I, N terminal region 28 167 1.6E-34 T 13-09-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 Gene3D G3DSA:3.60.120.10 13 489 2.6E-174 T 13-09-2016 IPR005801 ADC synthase GO:0009058 PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 PANTHER PTHR11236 1 489 1.3E-236 T 13-09-2016 PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 PRINTS PR00095 Anthranilate synthase component I signature 324 337 4.8E-25 T 13-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 PRINTS PR00095 Anthranilate synthase component I signature 338 351 4.8E-25 T 13-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 PRINTS PR00095 Anthranilate synthase component I signature 433 447 4.8E-25 T 13-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 PRINTS PR00095 Anthranilate synthase component I signature 418 432 4.8E-25 T 13-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 PANTHER PTHR11236:SF9 1 489 1.3E-236 T 13-09-2016 PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 Pfam PF00425 chorismate binding enzyme 223 476 2.8E-96 T 13-09-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 SUPERFAMILY SSF56322 14 485 6.93E-157 T 13-09-2016 IPR005801 ADC synthase GO:0009058 PMA3_RS27485 222b29e8b1d6e288f40941c294d52c84 493 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 484 1.5E-171 T 13-09-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 SUPERFAMILY SSF51735 5 253 7.41E-63 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 184 2.0E-6 T 13-09-2016 PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 Gene3D G3DSA:3.40.50.720 3 255 1.3E-63 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PANTHER PTHR24322:SF482 14 148 7.7E-68 T 13-09-2016 PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PANTHER PTHR24322:SF482 164 196 7.7E-68 T 13-09-2016 PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 5.5E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 5.5E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 5.5E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.3E-24 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.3E-24 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.3E-24 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.3E-24 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.3E-24 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.3E-24 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 Pfam PF00106 short chain dehydrogenase 10 196 2.1E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PANTHER PTHR24322 14 148 7.7E-68 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24860 71329cd9865305650c6f363341b1b27b 303 PANTHER PTHR24322 164 196 7.7E-68 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS29570 3f4c91e570e8d01290b1ff0677ddc661 126 Gene3D G3DSA:3.30.1330.40 2 122 3.6E-50 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS29570 3f4c91e570e8d01290b1ff0677ddc661 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 4.4E-54 T 13-09-2016 IPR006056 RidA family PMA3_RS29570 3f4c91e570e8d01290b1ff0677ddc661 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 13-09-2016 IPR019897 RidA, conserved site PMA3_RS29570 3f4c91e570e8d01290b1ff0677ddc661 126 Pfam PF01042 Endoribonuclease L-PSP 10 124 2.4E-43 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS29570 3f4c91e570e8d01290b1ff0677ddc661 126 SUPERFAMILY SSF55298 1 125 1.35E-46 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS29570 3f4c91e570e8d01290b1ff0677ddc661 126 PANTHER PTHR11803 1 122 3.0E-53 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS17340 fd2c6cea271ddcd36b5736ddb3032bfd 270 Gene3D G3DSA:3.40.50.150 32 189 6.2E-38 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS17340 fd2c6cea271ddcd36b5736ddb3032bfd 270 PANTHER PTHR10108:SF889 13 153 9.9E-41 T 13-09-2016 PMA3_RS17340 fd2c6cea271ddcd36b5736ddb3032bfd 270 Pfam PF08241 Methyltransferase domain 50 143 4.6E-22 T 13-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PMA3_RS17340 fd2c6cea271ddcd36b5736ddb3032bfd 270 PANTHER PTHR10108 13 153 9.9E-41 T 13-09-2016 PMA3_RS17340 fd2c6cea271ddcd36b5736ddb3032bfd 270 SUPERFAMILY SSF53335 22 243 3.41E-40 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS17765 355f0f48eafa7837cbb0b47ad0d147a5 283 PIRSF PIRSF000105 1 283 5.6E-86 T 13-09-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 PMA3_RS17765 355f0f48eafa7837cbb0b47ad0d147a5 283 SUPERFAMILY SSF51735 2 184 4.19E-57 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS17765 355f0f48eafa7837cbb0b47ad0d147a5 283 PANTHER PTHR23309 6 283 4.9E-132 T 13-09-2016 PMA3_RS17765 355f0f48eafa7837cbb0b47ad0d147a5 283 Gene3D G3DSA:1.10.1040.10 188 282 2.2E-34 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS17765 355f0f48eafa7837cbb0b47ad0d147a5 283 Gene3D G3DSA:3.40.50.720 4 187 3.7E-61 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS17765 355f0f48eafa7837cbb0b47ad0d147a5 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 3.6E-33 T 13-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS17765 355f0f48eafa7837cbb0b47ad0d147a5 283 SUPERFAMILY SSF48179 185 282 2.98E-33 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS17765 355f0f48eafa7837cbb0b47ad0d147a5 283 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 207 - T 13-09-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS17765 355f0f48eafa7837cbb0b47ad0d147a5 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 181 6.6E-63 T 13-09-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 SUPERFAMILY SSF53686 1 461 2.88E-166 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 13-09-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 PANTHER PTHR10314:SF1 53 329 8.6E-168 T 13-09-2016 PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 Gene3D G3DSA:3.40.50.1100 130 201 4.5E-7 T 13-09-2016 PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 Gene3D G3DSA:3.40.50.1100 202 436 3.1E-97 T 13-09-2016 PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 Pfam PF14821 Threonine synthase N terminus 2 80 8.4E-30 T 13-09-2016 IPR029144 Threonine synthase, N-terminal PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 PANTHER PTHR10314:SF1 361 468 8.6E-168 T 13-09-2016 PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 PANTHER PTHR10314:SF1 25 36 8.6E-168 T 13-09-2016 PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 TIGRFAM TIGR00260 thrC: threonine synthase 67 429 7.6E-82 T 13-09-2016 IPR004450 Threonine synthase-like PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 399 6.2E-25 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 Gene3D G3DSA:3.90.1380.10 1 85 9.1E-31 T 13-09-2016 IPR029144 Threonine synthase, N-terminal PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 PANTHER PTHR10314 361 468 8.6E-168 T 13-09-2016 PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 PANTHER PTHR10314 25 36 8.6E-168 T 13-09-2016 PMA3_RS04495 ddc6249c861e01723e9bbee40a4d7ddb 469 PANTHER PTHR10314 53 329 8.6E-168 T 13-09-2016 PMA3_RS09365 875bfe2480a7a9735a2e02a0b746eec0 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 1.5E-19 T 13-09-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PMA3_RS09365 875bfe2480a7a9735a2e02a0b746eec0 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 1.5E-19 T 13-09-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PMA3_RS09365 875bfe2480a7a9735a2e02a0b746eec0 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.5E-19 T 13-09-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PMA3_RS09365 875bfe2480a7a9735a2e02a0b746eec0 64 PANTHER PTHR33343 1 61 9.3E-23 T 13-09-2016 PMA3_RS09365 875bfe2480a7a9735a2e02a0b746eec0 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 5.6E-26 T 13-09-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PMA3_RS09365 875bfe2480a7a9735a2e02a0b746eec0 64 Pfam PF01632 Ribosomal protein L35 2 61 8.4E-25 T 13-09-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS09365 875bfe2480a7a9735a2e02a0b746eec0 64 SUPERFAMILY SSF143034 2 61 2.09E-20 T 13-09-2016 PMA3_RS09365 875bfe2480a7a9735a2e02a0b746eec0 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 13-09-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS09365 875bfe2480a7a9735a2e02a0b746eec0 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.843 T 13-09-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PMA3_RS06930 5f0fdc713c892a78790fe65e6531d62d 605 PANTHER PTHR24221:SF233 13 605 0.0 T 13-09-2016 PMA3_RS06930 5f0fdc713c892a78790fe65e6531d62d 605 Pfam PF00664 ABC transporter transmembrane region 70 322 2.6E-28 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS06930 5f0fdc713c892a78790fe65e6531d62d 605 SUPERFAMILY SSF90123 22 355 4.97E-57 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS06930 5f0fdc713c892a78790fe65e6531d62d 605 PANTHER PTHR24221 13 605 0.0 T 13-09-2016 PMA3_RS06930 5f0fdc713c892a78790fe65e6531d62d 605 Gene3D G3DSA:3.40.50.300 369 601 3.8E-76 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06930 5f0fdc713c892a78790fe65e6531d62d 605 Gene3D G3DSA:1.20.1560.10 22 353 1.2E-53 T 13-09-2016 PMA3_RS06930 5f0fdc713c892a78790fe65e6531d62d 605 SMART SM00382 393 584 1.1E-14 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS06930 5f0fdc713c892a78790fe65e6531d62d 605 SUPERFAMILY SSF52540 367 600 8.84E-80 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06930 5f0fdc713c892a78790fe65e6531d62d 605 Pfam PF00005 ABC transporter 384 532 1.8E-32 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS06930 5f0fdc713c892a78790fe65e6531d62d 605 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS08775 9444eac341ed916dec363bda07d48262 157 SMART SM00530 99 152 0.0028 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS08775 9444eac341ed916dec363bda07d48262 157 SUPERFAMILY SSF47413 98 155 8.76E-7 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS08775 9444eac341ed916dec363bda07d48262 157 Gene3D G3DSA:1.10.260.40 91 153 3.9E-8 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS28920 e550b66a64a5839f7f1180d18bf0d977 268 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS28920 e550b66a64a5839f7f1180d18bf0d977 268 SMART SM00382 39 213 8.2E-18 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS28920 e550b66a64a5839f7f1180d18bf0d977 268 PANTHER PTHR24220:SF365 16 261 3.7E-156 T 13-09-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 PMA3_RS28920 e550b66a64a5839f7f1180d18bf0d977 268 SUPERFAMILY SSF52540 15 215 1.22E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28920 e550b66a64a5839f7f1180d18bf0d977 268 PANTHER PTHR24220 16 261 3.7E-156 T 13-09-2016 PMA3_RS28920 e550b66a64a5839f7f1180d18bf0d977 268 Pfam PF00005 ABC transporter 30 163 4.2E-30 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS28920 e550b66a64a5839f7f1180d18bf0d977 268 Gene3D G3DSA:3.40.50.300 13 214 1.3E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS22170 3c48172e60b5258e9b8c704cdb8f9616 374 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 373 1.3E-149 T 13-09-2016 IPR007434 Peptidogalycan biosysnthesis/recognition PMA3_RS22170 3c48172e60b5258e9b8c704cdb8f9616 374 Gene3D G3DSA:3.40.630.30 174 322 2.2E-20 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22170 3c48172e60b5258e9b8c704cdb8f9616 374 SUPERFAMILY SSF55729 174 349 1.63E-39 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22170 3c48172e60b5258e9b8c704cdb8f9616 374 PANTHER PTHR31384:SF26 9 309 3.9E-58 T 13-09-2016 PMA3_RS22170 3c48172e60b5258e9b8c704cdb8f9616 374 PANTHER PTHR31384 9 309 3.9E-58 T 13-09-2016 PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 190 325 1.9E-20 T 13-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 SUPERFAMILY SSF52467 184 338 5.14E-60 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 Gene3D G3DSA:3.40.50.1220 183 336 3.7E-48 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 169 1.2E-44 T 13-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 521 1.3E-32 T 13-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 PANTHER PTHR18968 4 523 2.4E-231 T 13-09-2016 PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 SUPERFAMILY SSF52518 5 173 3.09E-41 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 Gene3D G3DSA:3.40.50.970 6 172 4.3E-47 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 13-09-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 Gene3D G3DSA:3.40.50.970 347 523 1.4E-52 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 PANTHER PTHR18968:SF133 4 523 2.4E-231 T 13-09-2016 PMA3_RS26280 a27b20ce601984c55189ef6b5a17d349 528 SUPERFAMILY SSF52518 353 523 5.36E-50 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS04250 214fc430720b9f3e0cc9b0a029d85130 375 Gene3D G3DSA:3.50.50.60 310 364 1.5E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04250 214fc430720b9f3e0cc9b0a029d85130 375 Gene3D G3DSA:3.50.50.60 3 79 1.5E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04250 214fc430720b9f3e0cc9b0a029d85130 375 Gene3D G3DSA:3.50.50.60 141 216 1.5E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04250 214fc430720b9f3e0cc9b0a029d85130 375 PANTHER PTHR13847 3 361 5.6E-48 T 13-09-2016 PMA3_RS04250 214fc430720b9f3e0cc9b0a029d85130 375 SUPERFAMILY SSF51905 4 217 6.47E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04250 214fc430720b9f3e0cc9b0a029d85130 375 SUPERFAMILY SSF51905 310 364 6.47E-40 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS04250 214fc430720b9f3e0cc9b0a029d85130 375 Pfam PF01266 FAD dependent oxidoreductase 5 345 5.7E-44 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS04250 214fc430720b9f3e0cc9b0a029d85130 375 PANTHER PTHR13847:SF206 3 361 5.6E-48 T 13-09-2016 PMA3_RS04250 214fc430720b9f3e0cc9b0a029d85130 375 Gene3D G3DSA:3.30.9.10 217 305 4.6E-8 T 13-09-2016 PMA3_RS04250 214fc430720b9f3e0cc9b0a029d85130 375 Gene3D G3DSA:3.30.9.10 80 140 4.6E-8 T 13-09-2016 PMA3_RS12410 e01b3cf917bddff3c7f734675cf724e3 293 SUPERFAMILY SSF53474 8 262 2.19E-42 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS12410 e01b3cf917bddff3c7f734675cf724e3 293 PANTHER PTHR11440 7 119 3.2E-13 T 13-09-2016 PMA3_RS12410 e01b3cf917bddff3c7f734675cf724e3 293 Gene3D G3DSA:3.40.50.1820 4 292 2.8E-52 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS12410 e01b3cf917bddff3c7f734675cf724e3 293 Pfam PF00561 alpha/beta hydrolase fold 10 190 7.2E-14 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS06895 4bd9be35f74088235438e548a9329db7 320 PANTHER PTHR22911:SF55 11 318 3.4E-90 T 13-09-2016 PMA3_RS06895 4bd9be35f74088235438e548a9329db7 320 SUPERFAMILY SSF103481 44 144 1.57E-12 T 13-09-2016 PMA3_RS06895 4bd9be35f74088235438e548a9329db7 320 Pfam PF00892 EamA-like transporter family 10 143 6.7E-19 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS06895 4bd9be35f74088235438e548a9329db7 320 Pfam PF00892 EamA-like transporter family 161 300 1.4E-11 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS06895 4bd9be35f74088235438e548a9329db7 320 PANTHER PTHR22911 11 318 3.4E-90 T 13-09-2016 PMA3_RS14930 803835910a00b42968e01079636e6b45 252 PANTHER PTHR12993 36 244 5.5E-22 T 13-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PMA3_RS14930 803835910a00b42968e01079636e6b45 252 Pfam PF02585 GlcNAc-PI de-N-acetylase 42 168 2.5E-24 T 13-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PMA3_RS14930 803835910a00b42968e01079636e6b45 252 SUPERFAMILY SSF102588 37 251 5.49E-46 T 13-09-2016 IPR024078 Putative deacetylase LmbE-like domain PMA3_RS14930 803835910a00b42968e01079636e6b45 252 Gene3D G3DSA:3.40.50.10320 37 227 8.4E-41 T 13-09-2016 IPR024078 Putative deacetylase LmbE-like domain PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 PANTHER PTHR11958 23 452 9.8E-242 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 5.7E-25 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 5.7E-25 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 5.7E-25 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 5.7E-25 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 5.7E-25 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 5.7E-25 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 PANTHER PTHR11958:SF5 23 452 9.8E-242 T 13-09-2016 PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 3.1E-102 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 SUPERFAMILY SSF118215 29 441 5.75E-97 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS28680 2459acdfaa2a807335639af12d30bed5 463 Gene3D G3DSA:1.10.3860.10 25 449 1.2E-99 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS02885 493d9892fb8cfc3cd15b6ef4a1073b70 308 Pfam PF00892 EamA-like transporter family 14 142 1.4E-16 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS02885 493d9892fb8cfc3cd15b6ef4a1073b70 308 Pfam PF00892 EamA-like transporter family 152 285 2.9E-18 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS02885 493d9892fb8cfc3cd15b6ef4a1073b70 308 PANTHER PTHR32322:SF8 1 308 1.9E-125 T 13-09-2016 PMA3_RS02885 493d9892fb8cfc3cd15b6ef4a1073b70 308 PANTHER PTHR32322 1 308 1.9E-125 T 13-09-2016 PMA3_RS02885 493d9892fb8cfc3cd15b6ef4a1073b70 308 SUPERFAMILY SSF103481 187 292 3.79E-12 T 13-09-2016 PMA3_RS02885 493d9892fb8cfc3cd15b6ef4a1073b70 308 SUPERFAMILY SSF103481 44 146 5.75E-11 T 13-09-2016 PMA3_RS21520 0526581caca35271f6e5311b00377496 211 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 6 204 1.6E-79 T 13-09-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 PMA3_RS21520 0526581caca35271f6e5311b00377496 211 PANTHER PTHR24220 7 192 4.1E-92 T 13-09-2016 PMA3_RS21520 0526581caca35271f6e5311b00377496 211 Pfam PF00005 ABC transporter 22 161 1.1E-30 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS21520 0526581caca35271f6e5311b00377496 211 SUPERFAMILY SSF52540 7 192 1.51E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21520 0526581caca35271f6e5311b00377496 211 Gene3D G3DSA:3.40.50.300 18 195 8.9E-43 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21520 0526581caca35271f6e5311b00377496 211 SMART SM00382 30 210 1.0E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS21520 0526581caca35271f6e5311b00377496 211 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS21520 0526581caca35271f6e5311b00377496 211 PANTHER PTHR24220:SF508 7 192 4.1E-92 T 13-09-2016 PMA3_RS11495 1be6539bfa1101020209b83b7375910d 637 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 427 551 1.2E-24 T 13-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PMA3_RS11495 1be6539bfa1101020209b83b7375910d 637 SMART SM00382 422 554 3.8E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS11495 1be6539bfa1101020209b83b7375910d 637 PANTHER PTHR23073:SF24 427 618 5.6E-38 T 13-09-2016 PMA3_RS11495 1be6539bfa1101020209b83b7375910d 637 Gene3D G3DSA:3.40.50.300 381 565 2.0E-36 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11495 1be6539bfa1101020209b83b7375910d 637 PANTHER PTHR23073 427 618 5.6E-38 T 13-09-2016 PMA3_RS11495 1be6539bfa1101020209b83b7375910d 637 SUPERFAMILY SSF52540 382 604 4.37E-39 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11455 bbf5f2015607d053f7ab513625a1dce5 246 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 76 81 - T 13-09-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 PMA3_RS11455 bbf5f2015607d053f7ab513625a1dce5 246 PANTHER PTHR24032 2 239 1.8E-23 T 13-09-2016 PMA3_RS11455 bbf5f2015607d053f7ab513625a1dce5 246 Pfam PF00149 Calcineurin-like phosphoesterase 19 201 4.3E-11 T 13-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PMA3_RS11455 bbf5f2015607d053f7ab513625a1dce5 246 SUPERFAMILY SSF56300 16 229 7.74E-39 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS11455 bbf5f2015607d053f7ab513625a1dce5 246 Gene3D G3DSA:3.60.21.10 9 234 1.6E-37 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 Gene3D G3DSA:3.40.50.980 22 131 3.1E-36 T 13-09-2016 PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 Gene3D G3DSA:3.40.50.980 171 195 3.1E-36 T 13-09-2016 PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 SUPERFAMILY SSF56801 16 538 2.88E-141 T 13-09-2016 PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 Gene3D G3DSA:2.30.38.10 369 436 2.8E-21 T 13-09-2016 PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 527 5.0E-20 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 Gene3D G3DSA:3.40.50.980 196 343 3.5E-32 T 13-09-2016 PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 PANTHER PTHR24095 19 540 1.8E-270 T 13-09-2016 PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 Gene3D G3DSA:3.30.300.30 440 538 6.9E-30 T 13-09-2016 PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 Pfam PF00501 AMP-binding enzyme 25 443 3.7E-95 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS13965 7a8bbe8aeafdaae29e80ba594e979b21 540 PANTHER PTHR24095:SF169 19 540 1.8E-270 T 13-09-2016 PMA3_RS15905 8c235756886a241df926145a5a99b7e0 511 SMART SM00052 257 503 3.9E-99 T 13-09-2016 IPR001633 EAL domain PMA3_RS15905 8c235756886a241df926145a5a99b7e0 511 SUPERFAMILY SSF141868 263 509 3.01E-75 T 13-09-2016 IPR001633 EAL domain PMA3_RS15905 8c235756886a241df926145a5a99b7e0 511 Pfam PF00563 EAL domain 264 498 3.5E-60 T 13-09-2016 IPR001633 EAL domain PMA3_RS15905 8c235756886a241df926145a5a99b7e0 511 Pfam PF12792 CSS motif domain associated with EAL 42 231 4.0E-39 T 13-09-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PMA3_RS15905 8c235756886a241df926145a5a99b7e0 511 PANTHER PTHR33121:SF1 205 506 2.1E-106 T 13-09-2016 PMA3_RS15905 8c235756886a241df926145a5a99b7e0 511 PANTHER PTHR33121 205 506 2.1E-106 T 13-09-2016 PMA3_RS15905 8c235756886a241df926145a5a99b7e0 511 Gene3D G3DSA:3.20.20.450 263 509 9.9E-78 T 13-09-2016 IPR001633 EAL domain PMA3_RS19160 e040a4f9675abe0dc062db9e8ac1965c 417 Pfam PF03573 outer membrane porin, OprD family 26 415 4.6E-138 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS19160 e040a4f9675abe0dc062db9e8ac1965c 417 Gene3D G3DSA:2.40.160.10 30 417 1.9E-138 T 13-09-2016 IPR023614 Porin domain PMA3_RS19160 e040a4f9675abe0dc062db9e8ac1965c 417 PANTHER PTHR34596 1 417 3.3E-136 T 13-09-2016 PMA3_RS27565 0b03ce6a014b163bcabd71eb01ae485f 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 262 57.428 T 13-09-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PMA3_RS27565 0b03ce6a014b163bcabd71eb01ae485f 272 Gene3D G3DSA:3.40.50.150 3 194 1.1E-69 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS27565 0b03ce6a014b163bcabd71eb01ae485f 272 Gene3D G3DSA:1.10.8.100 198 263 4.2E-25 T 13-09-2016 IPR023165 rRNA adenine dimethylase-like PMA3_RS27565 0b03ce6a014b163bcabd71eb01ae485f 272 PANTHER PTHR11727 5 264 8.0E-100 T 13-09-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PMA3_RS27565 0b03ce6a014b163bcabd71eb01ae485f 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 7 258 3.5E-64 T 13-09-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PMA3_RS27565 0b03ce6a014b163bcabd71eb01ae485f 272 SUPERFAMILY SSF53335 6 263 5.08E-80 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS27565 0b03ce6a014b163bcabd71eb01ae485f 272 SMART SM00650 23 195 1.2E-88 T 13-09-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PMA3_RS27565 0b03ce6a014b163bcabd71eb01ae485f 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 66 - T 13-09-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 PMA3_RS27565 0b03ce6a014b163bcabd71eb01ae485f 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 7 260 2.9E-84 T 13-09-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PMA3_RS17050 7a11cb38afe103488961c9505a5f124b 739 SUPERFAMILY SSF53955 544 697 5.06E-20 T 13-09-2016 IPR023346 Lysozyme-like domain PMA3_RS17050 7a11cb38afe103488961c9505a5f124b 739 Gene3D G3DSA:3.30.20.10 595 617 9.3E-5 T 13-09-2016 PMA3_RS17050 7a11cb38afe103488961c9505a5f124b 739 ProSitePatterns PS00018 EF-hand calcium-binding domain. 394 406 - T 13-09-2016 IPR018247 EF-Hand 1, calcium-binding site PMA3_RS23085 f45365ca869223b61b0cad92f97d4f16 281 PANTHER PTHR32243 4 281 7.1E-142 T 13-09-2016 PMA3_RS23085 f45365ca869223b61b0cad92f97d4f16 281 Gene3D G3DSA:1.10.3720.10 12 266 2.7E-54 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23085 f45365ca869223b61b0cad92f97d4f16 281 SUPERFAMILY SSF161098 14 281 3.46E-61 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23085 f45365ca869223b61b0cad92f97d4f16 281 PANTHER PTHR32243:SF23 4 281 7.1E-142 T 13-09-2016 PMA3_RS23085 f45365ca869223b61b0cad92f97d4f16 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 273 1.5E-15 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23545 f951f910069cf92e9e53a81d844b5a99 295 Pfam PF00753 Metallo-beta-lactamase superfamily 42 228 2.7E-14 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS23545 f951f910069cf92e9e53a81d844b5a99 295 SMART SM00849 43 228 1.7E-23 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS23545 f951f910069cf92e9e53a81d844b5a99 295 PANTHER PTHR11935:SF5 1 295 1.1E-89 T 13-09-2016 PMA3_RS23545 f951f910069cf92e9e53a81d844b5a99 295 PANTHER PTHR11935 1 295 1.1E-89 T 13-09-2016 PMA3_RS23545 f951f910069cf92e9e53a81d844b5a99 295 SUPERFAMILY SSF56281 28 252 1.03E-44 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS23545 f951f910069cf92e9e53a81d844b5a99 295 Gene3D G3DSA:3.60.15.10 32 256 1.0E-40 T 13-09-2016 IPR001279 Metallo-beta-lactamase PMA3_RS19700 2b2b26108d6c0a1a0482efa63693c30e 335 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 328 24.067 T 13-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PMA3_RS19700 2b2b26108d6c0a1a0482efa63693c30e 335 PANTHER PTHR11432 1 333 1.0E-229 T 13-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PMA3_RS19700 2b2b26108d6c0a1a0482efa63693c30e 335 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 212 225 - T 13-09-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 PMA3_RS19700 2b2b26108d6c0a1a0482efa63693c30e 335 PANTHER PTHR11432:SF8 1 333 1.0E-229 T 13-09-2016 PMA3_RS19700 2b2b26108d6c0a1a0482efa63693c30e 335 Pfam PF00146 NADH dehydrogenase 17 322 6.0E-119 T 13-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PMA3_RS19700 2b2b26108d6c0a1a0482efa63693c30e 335 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 13-09-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 PMA3_RS03775 0dcfed904b7008d2a2edd34c9e875224 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 274 44.305 T 13-09-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PMA3_RS03775 0dcfed904b7008d2a2edd34c9e875224 276 Gene3D G3DSA:3.40.50.150 85 272 1.6E-68 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS03775 0dcfed904b7008d2a2edd34c9e875224 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 22 270 8.7E-89 T 13-09-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PMA3_RS03775 0dcfed904b7008d2a2edd34c9e875224 276 Pfam PF05175 Methyltransferase small domain 102 190 1.1E-15 T 13-09-2016 IPR007848 Methyltransferase small domain GO:0008168 PMA3_RS03775 0dcfed904b7008d2a2edd34c9e875224 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 18 273 3.8E-76 T 13-09-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PMA3_RS03775 0dcfed904b7008d2a2edd34c9e875224 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 13-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PMA3_RS03775 0dcfed904b7008d2a2edd34c9e875224 276 SUPERFAMILY SSF53335 12 270 1.3E-55 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS03775 0dcfed904b7008d2a2edd34c9e875224 276 PANTHER PTHR18895:SF64 1 272 1.5E-103 T 13-09-2016 PMA3_RS03775 0dcfed904b7008d2a2edd34c9e875224 276 PANTHER PTHR18895 1 272 1.5E-103 T 13-09-2016 PMA3_RS03775 0dcfed904b7008d2a2edd34c9e875224 276 Gene3D G3DSA:1.10.8.10 11 83 1.5E-23 T 13-09-2016 PMA3_RS24665 7334e66abaf920ee3b28b2daeb91cc88 891 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 537 617 7.2E-25 T 13-09-2016 IPR022385 Rhs repeat-associated core GO:0097264 PMA3_RS24665 7334e66abaf920ee3b28b2daeb91cc88 891 SUPERFAMILY SSF101447 666 707 6.02E-5 T 13-09-2016 PMA3_RS24665 7334e66abaf920ee3b28b2daeb91cc88 891 SUPERFAMILY SSF101447 628 638 6.02E-5 T 13-09-2016 PMA3_RS24665 7334e66abaf920ee3b28b2daeb91cc88 891 PANTHER PTHR11219 1 617 1.2E-117 T 13-09-2016 PMA3_RS24665 7334e66abaf920ee3b28b2daeb91cc88 891 PANTHER PTHR11219:SF45 1 617 1.2E-117 T 13-09-2016 PMA3_RS24920 3d082e744c6eeb95ee902d5529022bec 263 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS24920 3d082e744c6eeb95ee902d5529022bec 263 PIRSF PIRSF039085 19 262 1.2E-107 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS24920 3d082e744c6eeb95ee902d5529022bec 263 SMART SM00382 47 234 2.3E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS24920 3d082e744c6eeb95ee902d5529022bec 263 PANTHER PTHR24220:SF474 24 263 4.5E-156 T 13-09-2016 PMA3_RS24920 3d082e744c6eeb95ee902d5529022bec 263 Gene3D G3DSA:3.40.50.300 22 258 6.1E-85 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24920 3d082e744c6eeb95ee902d5529022bec 263 SUPERFAMILY SSF52540 22 256 1.1E-80 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24920 3d082e744c6eeb95ee902d5529022bec 263 Pfam PF00005 ABC transporter 38 186 3.2E-36 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS24920 3d082e744c6eeb95ee902d5529022bec 263 PANTHER PTHR24220 24 263 4.5E-156 T 13-09-2016 PMA3_RS24585 12a0563b587271101b172a3940c8ab46 157 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 155 35.394 T 13-09-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 PMA3_RS24585 12a0563b587271101b172a3940c8ab46 157 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 2 149 2.6E-68 T 13-09-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 PMA3_RS24585 12a0563b587271101b172a3940c8ab46 157 Pfam PF01967 MoaC family 13 147 2.3E-54 T 13-09-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 PMA3_RS24585 12a0563b587271101b172a3940c8ab46 157 SUPERFAMILY SSF55040 9 152 1.83E-60 T 13-09-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 PMA3_RS24585 12a0563b587271101b172a3940c8ab46 157 PANTHER PTHR22960 2 155 6.1E-99 T 13-09-2016 PMA3_RS24585 12a0563b587271101b172a3940c8ab46 157 Gene3D G3DSA:3.30.70.640 2 155 3.7E-67 T 13-09-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 PMA3_RS18730 4c8be65705b585dc8091093141ef4722 411 Pfam PF13458 Periplasmic binding protein 37 374 1.4E-82 T 13-09-2016 IPR028081 Leucine-binding protein domain PMA3_RS18730 4c8be65705b585dc8091093141ef4722 411 Gene3D G3DSA:3.40.50.2300 164 310 7.3E-16 T 13-09-2016 PMA3_RS18730 4c8be65705b585dc8091093141ef4722 411 PANTHER PTHR30483 24 411 3.6E-174 T 13-09-2016 PMA3_RS18730 4c8be65705b585dc8091093141ef4722 411 Gene3D G3DSA:3.40.50.2300 34 157 2.7E-24 T 13-09-2016 PMA3_RS18730 4c8be65705b585dc8091093141ef4722 411 Gene3D G3DSA:3.40.50.2300 311 361 2.7E-24 T 13-09-2016 PMA3_RS18730 4c8be65705b585dc8091093141ef4722 411 SUPERFAMILY SSF53822 38 409 1.24E-82 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS18730 4c8be65705b585dc8091093141ef4722 411 PANTHER PTHR30483:SF17 24 411 3.6E-174 T 13-09-2016 PMA3_RS05610 1d2d9a56d192b99b8866d869aedbe540 370 Gene3D G3DSA:3.40.630.10 15 264 2.3E-15 T 13-09-2016 PMA3_RS05610 1d2d9a56d192b99b8866d869aedbe540 370 SUPERFAMILY SSF53187 143 362 5.29E-43 T 13-09-2016 PMA3_RS05610 1d2d9a56d192b99b8866d869aedbe540 370 SUPERFAMILY SSF53187 18 109 5.29E-43 T 13-09-2016 PMA3_RS05610 1d2d9a56d192b99b8866d869aedbe540 370 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 29 357 8.8E-26 T 13-09-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 PMA3_RS06985 8286508f6bc2a79dbf3539aec83555d1 238 Gene3D G3DSA:3.10.50.40 114 228 2.8E-44 T 13-09-2016 PMA3_RS06985 8286508f6bc2a79dbf3539aec83555d1 238 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 130 5.9E-31 T 13-09-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PMA3_RS06985 8286508f6bc2a79dbf3539aec83555d1 238 Gene3D G3DSA:1.10.287.460 24 113 3.1E-27 T 13-09-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PMA3_RS06985 8286508f6bc2a79dbf3539aec83555d1 238 PANTHER PTHR10516 108 230 8.0E-56 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS06985 8286508f6bc2a79dbf3539aec83555d1 238 PANTHER PTHR10516 41 66 8.0E-56 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS06985 8286508f6bc2a79dbf3539aec83555d1 238 SUPERFAMILY SSF54534 30 228 2.55E-56 T 13-09-2016 PMA3_RS06985 8286508f6bc2a79dbf3539aec83555d1 238 PANTHER PTHR10516:SF320 108 230 8.0E-56 T 13-09-2016 PMA3_RS06985 8286508f6bc2a79dbf3539aec83555d1 238 PANTHER PTHR10516:SF320 41 66 8.0E-56 T 13-09-2016 PMA3_RS06985 8286508f6bc2a79dbf3539aec83555d1 238 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 138 224 1.6E-25 T 13-09-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PMA3_RS21850 ecab1265c57efcf4010873122a46df4a 137 PANTHER PTHR11075 7 137 2.3E-42 T 13-09-2016 PMA3_RS21850 ecab1265c57efcf4010873122a46df4a 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 13-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PMA3_RS21850 ecab1265c57efcf4010873122a46df4a 137 SUPERFAMILY SSF75620 7 106 1.06E-11 T 13-09-2016 PMA3_RS21850 ecab1265c57efcf4010873122a46df4a 137 Pfam PF00472 RF-1 domain 5 132 8.7E-27 T 13-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PMA3_RS21850 ecab1265c57efcf4010873122a46df4a 137 Gene3D G3DSA:3.30.160.200 2 107 1.9E-34 T 13-09-2016 PMA3_RS02900 d52d1b205b60e3b84e4f0a3c60c09d56 306 Gene3D G3DSA:3.40.800.20 3 281 2.7E-63 T 13-09-2016 IPR023801 Histone deacetylase domain PMA3_RS02900 d52d1b205b60e3b84e4f0a3c60c09d56 306 Pfam PF00850 Histone deacetylase domain 27 282 4.1E-46 T 13-09-2016 IPR023801 Histone deacetylase domain PMA3_RS02900 d52d1b205b60e3b84e4f0a3c60c09d56 306 PANTHER PTHR10625:SF131 1 286 1.4E-121 T 13-09-2016 PMA3_RS02900 d52d1b205b60e3b84e4f0a3c60c09d56 306 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 1.1E-13 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS02900 d52d1b205b60e3b84e4f0a3c60c09d56 306 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 1.1E-13 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS02900 d52d1b205b60e3b84e4f0a3c60c09d56 306 PRINTS PR01270 Histone deacetylase superfamily signature 225 235 1.1E-13 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS02900 d52d1b205b60e3b84e4f0a3c60c09d56 306 SUPERFAMILY SSF52768 2 285 4.22E-79 T 13-09-2016 PMA3_RS02900 d52d1b205b60e3b84e4f0a3c60c09d56 306 PANTHER PTHR10625 1 286 1.4E-121 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 PANTHER PTHR12128 1 292 4.3E-146 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 SMART SM01130 1 289 8.0E-147 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 13-09-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 13-09-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 286 4.6E-115 T 13-09-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 68.87 T 13-09-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 PIRSF PIRSF001365 1 291 2.0E-97 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 4.1E-34 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 4.1E-34 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 4.1E-34 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 4.1E-34 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 SUPERFAMILY SSF51569 2 288 2.09E-104 T 13-09-2016 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 PANTHER PTHR12128:SF34 1 292 4.3E-146 T 13-09-2016 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 Gene3D G3DSA:3.20.20.70 1 291 5.0E-122 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS22500 a7f4cdd42113a7f92a0dbff5f6aa34f0 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 6.4E-107 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS16515 7afd686c1a106811e23f9505b5fe24fb 458 Gene3D G3DSA:3.10.20.70 12 123 3.3E-18 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS16515 7afd686c1a106811e23f9505b5fe24fb 458 SUPERFAMILY SSF55931 122 456 8.5E-101 T 13-09-2016 PMA3_RS16515 7afd686c1a106811e23f9505b5fe24fb 458 PANTHER PTHR20852:SF7 12 458 1.5E-144 T 13-09-2016 PMA3_RS16515 7afd686c1a106811e23f9505b5fe24fb 458 Pfam PF00120 Glutamine synthetase, catalytic domain 121 454 5.4E-107 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS16515 7afd686c1a106811e23f9505b5fe24fb 458 SUPERFAMILY SSF54368 15 119 3.92E-16 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS16515 7afd686c1a106811e23f9505b5fe24fb 458 PANTHER PTHR20852 12 458 1.5E-144 T 13-09-2016 PMA3_RS16515 7afd686c1a106811e23f9505b5fe24fb 458 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 13-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS16515 7afd686c1a106811e23f9505b5fe24fb 458 Gene3D G3DSA:3.30.590.10 124 444 1.3E-92 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS16515 7afd686c1a106811e23f9505b5fe24fb 458 SMART SM01230 120 376 9.1E-92 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 Pfam PF03466 LysR substrate binding domain 101 288 1.3E-37 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 Gene3D G3DSA:1.10.10.10 6 87 4.8E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 PANTHER PTHR30126 2 285 1.1E-167 T 13-09-2016 PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 PANTHER PTHR30126:SF17 2 285 1.1E-167 T 13-09-2016 PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 SUPERFAMILY SSF46785 3 84 1.77E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 SUPERFAMILY SSF53850 98 288 3.51E-36 T 13-09-2016 PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 Gene3D G3DSA:3.40.190.10 104 174 1.2E-13 T 13-09-2016 PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.6E-23 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.4E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.4E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.4E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 7 285 1.6E-125 T 13-09-2016 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type PMA3_RS08210 b635c4bfbcbe1315be7ff9e655740822 290 Gene3D G3DSA:3.40.190.10 175 257 9.4E-23 T 13-09-2016 PMA3_RS26185 95b646dc83ba76d424cb12a60fd66b2d 86 Pfam PF07865 Protein of unknown function (DUF1652) 5 70 9.4E-20 T 13-09-2016 IPR012448 Protein of unknown function DUF1652 PMA3_RS27890 c8e2c1503cabf6e357509e9678d2a61b 168 Gene3D G3DSA:2.40.70.10 20 156 7.1E-44 T 13-09-2016 IPR021109 Aspartic peptidase domain PMA3_RS27890 c8e2c1503cabf6e357509e9678d2a61b 168 Pfam PF05618 Putative ATP-dependant zinc protease 23 166 1.2E-44 T 13-09-2016 PMA3_RS27890 c8e2c1503cabf6e357509e9678d2a61b 168 SUPERFAMILY SSF50630 22 163 5.63E-40 T 13-09-2016 IPR021109 Aspartic peptidase domain PMA3_RS27890 c8e2c1503cabf6e357509e9678d2a61b 168 PANTHER PTHR38037 1 168 8.5E-48 T 13-09-2016 PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 24 252 1.3E-107 T 13-09-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 88 1.7E-19 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 SUPERFAMILY SSF64288 114 251 7.69E-43 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 Gene3D G3DSA:3.40.1410.10 106 242 1.5E-52 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 PANTHER PTHR11751 21 112 7.2E-49 T 13-09-2016 PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 Gene3D G3DSA:1.10.10.10 20 96 8.8E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 SUPERFAMILY SSF46785 21 92 5.4E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 3.4E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 3.4E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 Pfam PF07702 UTRA domain 110 246 7.0E-35 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 SMART SM00866 109 246 4.4E-36 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 PANTHER PTHR11751:SF364 21 112 7.2E-49 T 13-09-2016 PMA3_RS01255 779f698b084899fbc60f9d1caeb4420e 253 SMART SM00345 29 88 6.9E-21 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS22685 c84c06c9ca07d6a1e5eac69b68acba98 409 Pfam PF14067 LssY C-terminus 257 367 9.7E-9 T 13-09-2016 IPR025902 LssY-like C-terminal domain PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 PANTHER PTHR23083 10 67 2.9E-17 T 13-09-2016 PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 PANTHER PTHR23083 370 527 2.9E-17 T 13-09-2016 PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 PANTHER PTHR23083 252 320 2.9E-17 T 13-09-2016 PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 Gene3D G3DSA:1.25.40.10 424 528 7.2E-10 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 SMART SM00028 420 453 8.9 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 SMART SM00028 21 54 0.0014 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 SMART SM00028 463 496 88.0 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 Gene3D G3DSA:1.25.40.10 21 61 8.2E-7 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 SUPERFAMILY SSF48452 369 525 2.1E-13 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 SUPERFAMILY SSF48452 219 310 1.35E-7 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS17845 25b429c56dd1ba57c9a9a36463c200d1 557 SUPERFAMILY SSF48452 25 76 1.35E-7 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS09815 c5a51e8f26504d28f4a3ec16b15ed1db 424 Pfam PF07690 Major Facilitator Superfamily 3 378 4.7E-27 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS09815 c5a51e8f26504d28f4a3ec16b15ed1db 424 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS09815 c5a51e8f26504d28f4a3ec16b15ed1db 424 PANTHER PTHR23508 2 421 3.3E-92 T 13-09-2016 PMA3_RS09815 c5a51e8f26504d28f4a3ec16b15ed1db 424 SUPERFAMILY SSF103473 4 421 9.16E-51 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS09815 c5a51e8f26504d28f4a3ec16b15ed1db 424 Gene3D G3DSA:1.20.1250.20 6 212 9.7E-23 T 13-09-2016 PMA3_RS09815 c5a51e8f26504d28f4a3ec16b15ed1db 424 Gene3D G3DSA:1.20.1250.20 238 419 5.9E-14 T 13-09-2016 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 8.3E-39 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 376 9.5E-53 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 Gene3D G3DSA:1.20.140.10 222 376 1.4E-70 T 13-09-2016 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 Gene3D G3DSA:1.10.540.10 2 119 3.4E-42 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 PANTHER PTHR10909:SF10 3 376 2.7E-168 T 13-09-2016 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 PANTHER PTHR10909 3 376 2.7E-168 T 13-09-2016 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 3.1E-27 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 SUPERFAMILY SSF56645 2 243 7.72E-84 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 SUPERFAMILY SSF47203 228 376 3.06E-59 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS14835 46339c44b69094f3261e7b09d384224f 376 Gene3D G3DSA:2.40.110.10 122 221 9.5E-39 T 13-09-2016 PMA3_RS02210 b948761c9941449f6bbc1936cee6f487 411 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 398 1.0E-81 T 13-09-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PMA3_RS02210 b948761c9941449f6bbc1936cee6f487 411 SUPERFAMILY SSF54675 4 139 4.51E-42 T 13-09-2016 PMA3_RS02210 b948761c9941449f6bbc1936cee6f487 411 PIRSF PIRSF000484 1 391 4.1E-62 T 13-09-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PMA3_RS02210 b948761c9941449f6bbc1936cee6f487 411 PANTHER PTHR11098 1 398 2.4E-204 T 13-09-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PMA3_RS02210 b948761c9941449f6bbc1936cee6f487 411 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 399 49.629 T 13-09-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PMA3_RS02210 b948761c9941449f6bbc1936cee6f487 411 SUPERFAMILY SSF51690 122 397 3.53E-88 T 13-09-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PMA3_RS02210 b948761c9941449f6bbc1936cee6f487 411 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 398 7.7E-150 T 13-09-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PMA3_RS02210 b948761c9941449f6bbc1936cee6f487 411 PANTHER PTHR11098:SF16 1 398 2.4E-204 T 13-09-2016 PMA3_RS02210 b948761c9941449f6bbc1936cee6f487 411 Gene3D G3DSA:3.20.140.10 7 399 2.2E-141 T 13-09-2016 PMA3_RS25260 d4037810af605d23b9b99f6cff454e01 303 PIRSF PIRSF001365 6 303 5.9E-56 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS25260 d4037810af605d23b9b99f6cff454e01 303 Pfam PF00701 Dihydrodipicolinate synthetase family 12 299 4.0E-52 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS25260 d4037810af605d23b9b99f6cff454e01 303 SUPERFAMILY SSF51569 12 300 4.4E-65 T 13-09-2016 PMA3_RS25260 d4037810af605d23b9b99f6cff454e01 303 PANTHER PTHR12128:SF19 1 299 1.3E-120 T 13-09-2016 PMA3_RS25260 d4037810af605d23b9b99f6cff454e01 303 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 4 302 51.11 T 13-09-2016 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501|UniPathway: UPA00564 PMA3_RS25260 d4037810af605d23b9b99f6cff454e01 303 PANTHER PTHR12128 1 299 1.3E-120 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS25260 d4037810af605d23b9b99f6cff454e01 303 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 3 300 2.3E-132 T 13-09-2016 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501|UniPathway: UPA00564 PMA3_RS25260 d4037810af605d23b9b99f6cff454e01 303 Gene3D G3DSA:3.20.20.70 12 300 3.0E-73 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS25260 d4037810af605d23b9b99f6cff454e01 303 SMART SM01130 10 301 1.0E-74 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS08955 d6ef61d3f59d7f42a587cc518d758ab0 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 13-09-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS08955 d6ef61d3f59d7f42a587cc518d758ab0 319 PANTHER PTHR11082 1 311 2.2E-147 T 13-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS08955 d6ef61d3f59d7f42a587cc518d758ab0 319 SUPERFAMILY SSF51395 2 309 8.06E-72 T 13-09-2016 PMA3_RS08955 d6ef61d3f59d7f42a587cc518d758ab0 319 Pfam PF01207 Dihydrouridine synthase (Dus) 5 255 8.4E-65 T 13-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS08955 d6ef61d3f59d7f42a587cc518d758ab0 319 Gene3D G3DSA:3.20.20.70 2 243 2.4E-65 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS08955 d6ef61d3f59d7f42a587cc518d758ab0 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 314 51.16 T 13-09-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 PMA3_RS08955 d6ef61d3f59d7f42a587cc518d758ab0 319 PIRSF PIRSF006621 1 318 1.7E-78 T 13-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PMA3_RS08955 d6ef61d3f59d7f42a587cc518d758ab0 319 PANTHER PTHR11082:SF26 1 311 2.2E-147 T 13-09-2016 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 Gene3D G3DSA:2.102.10.10 43 148 8.3E-34 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 PANTHER PTHR21266:SF2 27 409 1.1E-55 T 13-09-2016 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 PANTHER PTHR21266 27 409 1.1E-55 T 13-09-2016 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 178 200 2.9E-16 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 101 121 2.9E-16 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 29 54 2.9E-16 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 59 74 2.9E-16 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 80 100 2.9E-16 T 13-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 182 414 1.6E-35 T 13-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 Pfam PF00355 Rieske [2Fe-2S] domain 44 123 5.7E-19 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 SUPERFAMILY SSF55961 170 417 8.63E-37 T 13-09-2016 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 Gene3D G3DSA:3.90.380.10 149 353 1.0E-8 T 13-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PMA3_RS10045 c1d17fb86538350fe74fd5170998d7c7 418 SUPERFAMILY SSF50022 21 155 9.69E-42 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS29020 f42e3f530516afed570b3e2024a950d3 334 PANTHER PTHR30006:SF4 5 329 7.9E-147 T 13-09-2016 PMA3_RS29020 f42e3f530516afed570b3e2024a950d3 334 PANTHER PTHR30006 5 329 7.9E-147 T 13-09-2016 PMA3_RS29020 f42e3f530516afed570b3e2024a950d3 334 Gene3D G3DSA:3.40.190.10 7 122 1.8E-31 T 13-09-2016 PMA3_RS29020 f42e3f530516afed570b3e2024a950d3 334 Gene3D G3DSA:3.40.190.10 266 301 1.8E-31 T 13-09-2016 PMA3_RS29020 f42e3f530516afed570b3e2024a950d3 334 PIRSF PIRSF002825 7 334 9.8E-102 T 13-09-2016 IPR026045 Ferric binding protein PMA3_RS29020 f42e3f530516afed570b3e2024a950d3 334 Gene3D G3DSA:3.40.190.10 126 265 9.2E-53 T 13-09-2016 PMA3_RS29020 f42e3f530516afed570b3e2024a950d3 334 SUPERFAMILY SSF53850 26 330 3.54E-79 T 13-09-2016 PMA3_RS29020 f42e3f530516afed570b3e2024a950d3 334 Pfam PF13343 Bacterial extracellular solute-binding protein 73 299 1.2E-21 T 13-09-2016 PMA3_RS24770 c3affe2a2389125ea4981c5e4cc28fae 98 Pfam PF12365 Protein of unknown function (DUF3649) 66 90 2.0E-10 T 13-09-2016 IPR022109 Protein of unknown function DUF3649 PMA3_RS26605 ff386559d1c27ac78ded72ef874d290f 240 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 31 92 3.7E-8 T 13-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PMA3_RS26605 ff386559d1c27ac78ded72ef874d290f 240 Pfam PF01467 Cytidylyltransferase-like 34 210 2.2E-23 T 13-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PMA3_RS26605 ff386559d1c27ac78ded72ef874d290f 240 SUPERFAMILY SSF52374 29 237 2.91E-50 T 13-09-2016 PMA3_RS26605 ff386559d1c27ac78ded72ef874d290f 240 Gene3D G3DSA:3.40.50.620 29 238 4.9E-63 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS26605 ff386559d1c27ac78ded72ef874d290f 240 PANTHER PTHR12039 29 240 1.1E-48 T 13-09-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 PMA3_RS26605 ff386559d1c27ac78ded72ef874d290f 240 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 34 236 1.6E-45 T 13-09-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 PMA3_RS26605 ff386559d1c27ac78ded72ef874d290f 240 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 29 237 30.028 T 13-09-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 PMA3_RS13825 337dfa11751882edfa1420f49a490af6 173 SUPERFAMILY SSF142433 2 157 1.18E-42 T 13-09-2016 IPR008136 CinA, C-terminal PMA3_RS13825 337dfa11751882edfa1420f49a490af6 173 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 8 153 1.9E-29 T 13-09-2016 IPR008136 CinA, C-terminal PMA3_RS13825 337dfa11751882edfa1420f49a490af6 173 PANTHER PTHR13939 1 165 1.7E-50 T 13-09-2016 PMA3_RS13825 337dfa11751882edfa1420f49a490af6 173 Pfam PF02464 Competence-damaged protein 3 153 1.8E-40 T 13-09-2016 IPR008136 CinA, C-terminal PMA3_RS13825 337dfa11751882edfa1420f49a490af6 173 Gene3D G3DSA:3.90.950.20 3 157 2.5E-42 T 13-09-2016 IPR008136 CinA, C-terminal PMA3_RS29270 422bfa7b9e1065db218ee2bad8efd231 136 PANTHER PTHR30437:SF5 5 134 4.1E-53 T 13-09-2016 PMA3_RS29270 422bfa7b9e1065db218ee2bad8efd231 136 Pfam PF14760 Rnk N-terminus 4 41 3.1E-10 T 13-09-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain PMA3_RS29270 422bfa7b9e1065db218ee2bad8efd231 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 125 2.2E-22 T 13-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PMA3_RS29270 422bfa7b9e1065db218ee2bad8efd231 136 Gene3D G3DSA:3.10.50.30 47 133 1.6E-29 T 13-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PMA3_RS29270 422bfa7b9e1065db218ee2bad8efd231 136 SUPERFAMILY SSF54534 49 125 9.94E-19 T 13-09-2016 PMA3_RS29270 422bfa7b9e1065db218ee2bad8efd231 136 PANTHER PTHR30437 5 134 4.1E-53 T 13-09-2016 PMA3_RS29270 422bfa7b9e1065db218ee2bad8efd231 136 Gene3D G3DSA:1.10.286.20 1 41 1.2E-15 T 13-09-2016 PMA3_RS08310 7220ce757bba579de48805273e80c4dc 113 Pfam PF11275 Protein of unknown function (DUF3077) 46 105 6.9E-7 T 13-09-2016 IPR021427 Protein of unknown function DUF3077 PMA3_RS09065 8d69b50bad4924081578ff54c4cc2c28 435 Gene3D G3DSA:3.40.1190.10 5 283 7.9E-88 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS09065 8d69b50bad4924081578ff54c4cc2c28 435 Gene3D G3DSA:3.90.190.20 287 423 4.5E-34 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS09065 8d69b50bad4924081578ff54c4cc2c28 435 PIRSF PIRSF001563 1 427 1.2E-102 T 13-09-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PMA3_RS09065 8d69b50bad4924081578ff54c4cc2c28 435 SUPERFAMILY SSF53244 286 423 7.69E-28 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS09065 8d69b50bad4924081578ff54c4cc2c28 435 SUPERFAMILY SSF53623 3 283 7.02E-87 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS09065 8d69b50bad4924081578ff54c4cc2c28 435 PANTHER PTHR11136:SF0 8 431 5.5E-117 T 13-09-2016 PMA3_RS09065 8d69b50bad4924081578ff54c4cc2c28 435 PANTHER PTHR11136 8 431 5.5E-117 T 13-09-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PMA3_RS09065 8d69b50bad4924081578ff54c4cc2c28 435 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 421 4.0E-96 T 13-09-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PMA3_RS09065 8d69b50bad4924081578ff54c4cc2c28 435 Pfam PF08245 Mur ligase middle domain 47 187 7.8E-13 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS09065 8d69b50bad4924081578ff54c4cc2c28 435 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 45 68 - T 13-09-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 PMA3_RS03265 3a187d2255f7d2548ca92729351ccea4 133 PANTHER PTHR30093:SF4 1 68 6.9E-17 T 13-09-2016 PMA3_RS03265 3a187d2255f7d2548ca92729351ccea4 133 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS03265 3a187d2255f7d2548ca92729351ccea4 133 SUPERFAMILY SSF54523 8 117 8.63E-19 T 13-09-2016 PMA3_RS03265 3a187d2255f7d2548ca92729351ccea4 133 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.4E-9 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS03265 3a187d2255f7d2548ca92729351ccea4 133 Gene3D G3DSA:3.30.700.10 8 73 1.9E-13 T 13-09-2016 PMA3_RS03265 3a187d2255f7d2548ca92729351ccea4 133 PANTHER PTHR30093 1 68 6.9E-17 T 13-09-2016 PMA3_RS03265 3a187d2255f7d2548ca92729351ccea4 133 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 29 109 2.7E-16 T 13-09-2016 IPR031982 Type IV minor pilin ComP PMA3_RS03265 3a187d2255f7d2548ca92729351ccea4 133 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 26 3.4E-8 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS29390 90a48f2041cd77004401f535dde49b8d 190 PANTHER PTHR11776:SF1 2 188 4.2E-83 T 13-09-2016 PMA3_RS29390 90a48f2041cd77004401f535dde49b8d 190 Pfam PF00156 Phosphoribosyl transferase domain 32 157 5.7E-7 T 13-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PMA3_RS29390 90a48f2041cd77004401f535dde49b8d 190 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 189 1.3E-88 T 13-09-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 PMA3_RS29390 90a48f2041cd77004401f535dde49b8d 190 Gene3D G3DSA:3.40.50.2020 2 188 8.7E-66 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS29390 90a48f2041cd77004401f535dde49b8d 190 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 40.944 T 13-09-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 PMA3_RS29390 90a48f2041cd77004401f535dde49b8d 190 PANTHER PTHR11776 2 188 4.2E-83 T 13-09-2016 PMA3_RS29390 90a48f2041cd77004401f535dde49b8d 190 SUPERFAMILY SSF53271 2 188 1.42E-46 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 PANTHER PTHR24423:SF483 194 522 1.8E-130 T 13-09-2016 PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 SUPERFAMILY SSF55874 365 522 2.75E-28 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 SUPERFAMILY SSF47384 297 373 2.35E-15 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 PANTHER PTHR24423 194 522 1.8E-130 T 13-09-2016 PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 SMART SM00388 309 375 1.6E-18 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 Gene3D G3DSA:1.10.287.130 303 360 4.6E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 522 5.1E-14 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 Gene3D G3DSA:3.30.450.20 196 233 1.0E-4 T 13-09-2016 PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 3.1E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 3.1E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 3.1E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 Pfam PF00512 His Kinase A (phospho-acceptor) domain 309 374 6.4E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 SMART SM00387 416 526 2.2E-25 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS03280 0abf16b81fb71d9ac7cd01eb8da76d31 529 Gene3D G3DSA:3.30.565.10 361 522 5.5E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11910 ab66feae43dd2393aa39e85e7bf4710e 395 PANTHER PTHR36451 52 389 5.1E-35 T 13-09-2016 PMA3_RS11910 ab66feae43dd2393aa39e85e7bf4710e 395 Gene3D G3DSA:3.40.50.300 89 109 1.8E-13 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11910 ab66feae43dd2393aa39e85e7bf4710e 395 Gene3D G3DSA:3.40.50.300 153 346 1.8E-13 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11910 ab66feae43dd2393aa39e85e7bf4710e 395 SUPERFAMILY SSF52540 88 132 1.19E-33 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11910 ab66feae43dd2393aa39e85e7bf4710e 395 SUPERFAMILY SSF52540 182 375 1.19E-33 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11910 ab66feae43dd2393aa39e85e7bf4710e 395 Pfam PF13469 Sulfotransferase family 91 344 3.7E-41 T 13-09-2016 PMA3_RS11910 ab66feae43dd2393aa39e85e7bf4710e 395 PANTHER PTHR36451:SF1 52 389 5.1E-35 T 13-09-2016 PMA3_RS12550 90be6d12bd2d4c8377256355ddfd7cc8 430 Pfam PF03573 outer membrane porin, OprD family 33 428 2.3E-145 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS12550 90be6d12bd2d4c8377256355ddfd7cc8 430 Gene3D G3DSA:2.40.160.10 39 430 4.3E-141 T 13-09-2016 IPR023614 Porin domain PMA3_RS12550 90be6d12bd2d4c8377256355ddfd7cc8 430 PANTHER PTHR34596 4 430 9.8E-149 T 13-09-2016 PMA3_RS28830 15f3cdfeacd16873a3282c715503a999 210 PANTHER PTHR12907:SF14 13 205 1.2E-63 T 13-09-2016 PMA3_RS28830 15f3cdfeacd16873a3282c715503a999 210 SMART SM00702 23 203 9.6E-25 T 13-09-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 PMA3_RS28830 15f3cdfeacd16873a3282c715503a999 210 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 114 203 6.3E-19 T 13-09-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PMA3_RS28830 15f3cdfeacd16873a3282c715503a999 210 PANTHER PTHR12907 13 205 1.2E-63 T 13-09-2016 PMA3_RS03535 f32b8ec1a9e21da7b09d84316b9626ec 872 ProSitePatterns PS00018 EF-hand calcium-binding domain. 564 576 - T 13-09-2016 IPR018247 EF-Hand 1, calcium-binding site PMA3_RS03535 f32b8ec1a9e21da7b09d84316b9626ec 872 Gene3D G3DSA:1.10.238.10 558 586 6.1E-4 T 13-09-2016 IPR011992 EF-hand domain pair PMA3_RS22375 1deeb24be15a0a5abc99c48105352d04 460 PANTHER PTHR20852 7 459 4.1E-132 T 13-09-2016 PMA3_RS22375 1deeb24be15a0a5abc99c48105352d04 460 Pfam PF00120 Glutamine synthetase, catalytic domain 123 456 3.2E-103 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS22375 1deeb24be15a0a5abc99c48105352d04 460 SMART SM01230 122 378 1.4E-97 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS22375 1deeb24be15a0a5abc99c48105352d04 460 PANTHER PTHR20852:SF7 7 459 4.1E-132 T 13-09-2016 PMA3_RS22375 1deeb24be15a0a5abc99c48105352d04 460 Gene3D G3DSA:3.30.590.10 125 445 2.2E-90 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS22375 1deeb24be15a0a5abc99c48105352d04 460 SUPERFAMILY SSF54368 11 119 1.14E-7 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS22375 1deeb24be15a0a5abc99c48105352d04 460 SUPERFAMILY SSF55931 124 458 4.12E-102 T 13-09-2016 PMA3_RS22375 1deeb24be15a0a5abc99c48105352d04 460 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 13-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS22255 5ab3aafa067c8c6981e0b0e567eb7ea5 324 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 13-09-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PMA3_RS22255 5ab3aafa067c8c6981e0b0e567eb7ea5 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 302 2.1E-67 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS22255 5ab3aafa067c8c6981e0b0e567eb7ea5 324 PANTHER PTHR10314 3 324 6.0E-151 T 13-09-2016 PMA3_RS22255 5ab3aafa067c8c6981e0b0e567eb7ea5 324 PANTHER PTHR10314:SF110 3 324 6.0E-151 T 13-09-2016 PMA3_RS22255 5ab3aafa067c8c6981e0b0e567eb7ea5 324 Gene3D G3DSA:3.40.50.1100 135 315 3.2E-72 T 13-09-2016 PMA3_RS22255 5ab3aafa067c8c6981e0b0e567eb7ea5 324 SUPERFAMILY SSF53686 7 312 2.1E-99 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS22255 5ab3aafa067c8c6981e0b0e567eb7ea5 324 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 313 1.6E-129 T 13-09-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PMA3_RS22255 5ab3aafa067c8c6981e0b0e567eb7ea5 324 Gene3D G3DSA:3.40.50.1100 38 134 1.4E-39 T 13-09-2016 PMA3_RS22255 5ab3aafa067c8c6981e0b0e567eb7ea5 324 TIGRFAM TIGR01139 cysK: cysteine synthase A 10 313 1.5E-135 T 13-09-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PMA3_RS24450 bf92e827c862d6a8056904801ce87316 290 PANTHER PTHR11825 4 272 1.7E-75 T 13-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS24450 bf92e827c862d6a8056904801ce87316 290 SUPERFAMILY SSF56752 6 286 3.53E-86 T 13-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS24450 bf92e827c862d6a8056904801ce87316 290 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 14 275 1.7E-77 T 13-09-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 PMA3_RS24450 bf92e827c862d6a8056904801ce87316 290 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 221 - T 13-09-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS24450 bf92e827c862d6a8056904801ce87316 290 Gene3D G3DSA:3.30.470.10 4 111 1.2E-36 T 13-09-2016 PMA3_RS24450 bf92e827c862d6a8056904801ce87316 290 Pfam PF01063 Amino-transferase class IV 40 266 3.5E-48 T 13-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PMA3_RS24450 bf92e827c862d6a8056904801ce87316 290 PANTHER PTHR11825:SF7 4 272 1.7E-75 T 13-09-2016 PMA3_RS24450 bf92e827c862d6a8056904801ce87316 290 Gene3D G3DSA:3.20.10.10 135 286 2.2E-46 T 13-09-2016 PMA3_RS21040 9f7e985f3e808373bb263316b2a4dbd5 83 Gene3D G3DSA:1.25.40.10 25 80 1.1E-4 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS05405 7a04f68fe05f5e1ae41dde281db18206 234 Pfam PF00775 Dioxygenase 45 226 6.0E-56 T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS05405 7a04f68fe05f5e1ae41dde281db18206 234 PANTHER PTHR33711 16 233 1.8E-96 T 13-09-2016 PMA3_RS05405 7a04f68fe05f5e1ae41dde281db18206 234 PANTHER PTHR33711:SF1 16 233 1.8E-96 T 13-09-2016 PMA3_RS05405 7a04f68fe05f5e1ae41dde281db18206 234 Gene3D G3DSA:2.60.130.10 17 233 1.1E-76 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS05405 7a04f68fe05f5e1ae41dde281db18206 234 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 16 234 2.5E-108 T 13-09-2016 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 PMA3_RS05405 7a04f68fe05f5e1ae41dde281db18206 234 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 7 41 1.3E-7 T 13-09-2016 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 PMA3_RS05405 7a04f68fe05f5e1ae41dde281db18206 234 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 77 105 - T 13-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PMA3_RS05405 7a04f68fe05f5e1ae41dde281db18206 234 SUPERFAMILY SSF49482 13 233 4.71E-73 T 13-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PMA3_RS01675 87b90f75ff9fb4c0e8eda7a55c2e3872 269 PANTHER PTHR10434 65 190 4.8E-19 T 13-09-2016 PMA3_RS01675 87b90f75ff9fb4c0e8eda7a55c2e3872 269 Pfam PF01553 Acyltransferase 85 200 5.0E-14 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS01675 87b90f75ff9fb4c0e8eda7a55c2e3872 269 SUPERFAMILY SSF69593 51 262 1.44E-28 T 13-09-2016 PMA3_RS01675 87b90f75ff9fb4c0e8eda7a55c2e3872 269 Gene3D G3DSA:3.40.1130.10 96 255 4.0E-9 T 13-09-2016 PMA3_RS01675 87b90f75ff9fb4c0e8eda7a55c2e3872 269 SMART SM00563 95 203 7.9E-18 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS18405 f0c2d65b679f552d0c61fcdd84a76cb7 306 SUPERFAMILY SSF51735 1 179 4.85E-11 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18405 f0c2d65b679f552d0c61fcdd84a76cb7 306 SUPERFAMILY SSF48179 178 301 8.16E-25 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS18405 f0c2d65b679f552d0c61fcdd84a76cb7 306 PANTHER PTHR21708 1 303 1.5E-101 T 13-09-2016 PMA3_RS18405 f0c2d65b679f552d0c61fcdd84a76cb7 306 PANTHER PTHR21708:SF26 1 303 1.5E-101 T 13-09-2016 PMA3_RS18405 f0c2d65b679f552d0c61fcdd84a76cb7 306 Gene3D G3DSA:3.40.50.720 1 175 1.3E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18405 f0c2d65b679f552d0c61fcdd84a76cb7 306 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 301 1.2E-62 T 13-09-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS18405 f0c2d65b679f552d0c61fcdd84a76cb7 306 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 5.1E-35 T 13-09-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS18405 f0c2d65b679f552d0c61fcdd84a76cb7 306 Gene3D G3DSA:1.10.1040.10 178 301 6.7E-25 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS18405 f0c2d65b679f552d0c61fcdd84a76cb7 306 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 178 297 3.2E-23 T 13-09-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 PANTHER PTHR10210 2 313 4.2E-182 T 13-09-2016 PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 13-09-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 313 48.194 T 13-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 PANTHER PTHR10210:SF41 2 313 4.2E-182 T 13-09-2016 PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 Gene3D G3DSA:3.40.50.2020 2 159 1.8E-73 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 SMART SM01400 4 121 2.7E-75 T 13-09-2016 PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 Gene3D G3DSA:3.40.50.2020 160 286 6.7E-56 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 313 4.8E-123 T 13-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 SUPERFAMILY SSF53271 69 305 1.43E-65 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 202 313 2.7E-34 T 13-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PMA3_RS03740 a097bfba2f23ea9759ab8e8a3587d98c 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 5.1E-48 T 13-09-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 Pfam PF01565 FAD binding domain 24 156 6.2E-28 T 13-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 216 337 9.4E-31 T 13-09-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 SUPERFAMILY SSF56194 212 338 4.71E-44 T 13-09-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 PANTHER PTHR21071:SF6 1 337 4.2E-149 T 13-09-2016 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 Gene3D G3DSA:3.90.78.10 240 337 3.1E-37 T 13-09-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 Gene3D G3DSA:3.30.43.10 9 73 7.0E-24 T 13-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 SUPERFAMILY SSF56176 10 197 8.88E-45 T 13-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 Gene3D G3DSA:3.30.465.10 81 239 3.6E-51 T 13-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 339 86.068 T 13-09-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 PANTHER PTHR21071 1 337 4.2E-149 T 13-09-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS06185 025c4ef96c2d753834ce6877ea4c204c 339 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 11 335 1.6E-67 T 13-09-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PMA3_RS08275 482ef3102b36795cd75b5663e1528cf7 341 SUPERFAMILY SSF52540 4 241 3.3E-86 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08275 482ef3102b36795cd75b5663e1528cf7 341 Gene3D G3DSA:3.40.50.300 4 232 2.1E-79 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08275 482ef3102b36795cd75b5663e1528cf7 341 Pfam PF08402 TOBE domain 262 334 2.8E-13 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS08275 482ef3102b36795cd75b5663e1528cf7 341 SUPERFAMILY SSF50331 238 333 3.57E-10 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS08275 482ef3102b36795cd75b5663e1528cf7 341 PANTHER PTHR24220:SF150 5 245 6.2E-122 T 13-09-2016 PMA3_RS08275 482ef3102b36795cd75b5663e1528cf7 341 PANTHER PTHR24220 5 245 6.2E-122 T 13-09-2016 PMA3_RS08275 482ef3102b36795cd75b5663e1528cf7 341 SMART SM00382 28 211 3.6E-19 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS08275 482ef3102b36795cd75b5663e1528cf7 341 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS08275 482ef3102b36795cd75b5663e1528cf7 341 Pfam PF00005 ABC transporter 23 161 1.4E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS28485 7b117c7785754f1c7bcdd95f17a63228 196 PANTHER PTHR33219 12 196 2.4E-64 T 13-09-2016 PMA3_RS28485 7b117c7785754f1c7bcdd95f17a63228 196 Pfam PF02325 YGGT family 14 81 1.9E-18 T 13-09-2016 IPR003425 CCB3/YggT GO:0016020 PMA3_RS28485 7b117c7785754f1c7bcdd95f17a63228 196 Pfam PF02325 YGGT family 109 178 1.1E-20 T 13-09-2016 IPR003425 CCB3/YggT GO:0016020 PMA3_RS28485 7b117c7785754f1c7bcdd95f17a63228 196 PANTHER PTHR33219:SF5 12 196 2.4E-64 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 Gene3D G3DSA:2.70.150.10 67 213 9.3E-19 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 540 8.2E-22 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 163 177 8.2E-22 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 452 462 8.2E-22 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 429 440 8.2E-22 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 504 523 8.2E-22 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 8.2E-22 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 Gene3D G3DSA:3.40.1110.10 329 431 5.0E-8 T 13-09-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 Pfam PF00122 E1-E2 ATPase 84 296 2.8E-52 T 13-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 SUPERFAMILY SSF56784 304 323 2.22E-42 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 SUPERFAMILY SSF56784 362 605 2.22E-42 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 PANTHER PTHR24093 38 609 1.1E-109 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 63 606 1.1E-155 T 13-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 Gene3D G3DSA:1.20.120.520 618 755 1.7E-12 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 Gene3D G3DSA:3.40.50.1000 432 567 6.3E-37 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 Gene3D G3DSA:3.40.50.1000 277 321 6.3E-37 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 Pfam PF00702 haloacid dehalogenase-like hydrolase 302 518 1.7E-33 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 SUPERFAMILY SSF81665 214 299 1.15E-11 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 SUPERFAMILY SSF81665 74 117 1.15E-11 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 Pfam PF01814 Hemerythrin HHE cation binding domain 624 753 8.6E-11 T 13-09-2016 IPR012312 Haemerythrin-like PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 PANTHER PTHR24093:SF126 38 609 1.1E-109 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 SUPERFAMILY SSF81653 116 212 1.44E-18 T 13-09-2016 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 85 326 1.6E-30 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 423 583 6.5E-29 T 13-09-2016 IPR001757 P-type ATPase GO:0016021 PMA3_RS12540 5e3a5334bfe61a2b30d97714c2659231 760 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 13-09-2016 IPR018303 P-type ATPase, phosphorylation site PMA3_RS02330 ea183a9f87e677d3ba1cdbaddc6bf472 296 SUPERFAMILY SSF53474 4 268 1.22E-45 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS02330 ea183a9f87e677d3ba1cdbaddc6bf472 296 Pfam PF00561 alpha/beta hydrolase fold 10 116 4.8E-14 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS02330 ea183a9f87e677d3ba1cdbaddc6bf472 296 Gene3D G3DSA:3.40.50.1820 5 295 6.5E-51 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS02330 ea183a9f87e677d3ba1cdbaddc6bf472 296 PANTHER PTHR11440 7 119 2.8E-16 T 13-09-2016 PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 Pfam PF00698 Acyl transferase domain 7 281 2.3E-40 T 13-09-2016 IPR014043 Acyl transferase PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 SUPERFAMILY SSF52151 191 310 1.39E-78 T 13-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 SUPERFAMILY SSF52151 5 123 1.39E-78 T 13-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 PANTHER PTHR10982 4 301 1.1E-144 T 13-09-2016 PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 Gene3D G3DSA:3.40.366.10 198 301 2.6E-71 T 13-09-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 Gene3D G3DSA:3.40.366.10 4 123 2.6E-71 T 13-09-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 PIRSF PIRSF000446 2 312 1.5E-117 T 13-09-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 311 8.0E-41 T 13-09-2016 IPR020801 Polyketide synthase, acyl transferase domain PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 290 5.5E-114 T 13-09-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 Gene3D G3DSA:3.30.70.250 126 197 7.6E-31 T 13-09-2016 PMA3_RS06250 915b4f65fd6294b77c8b87e1051a3f13 312 SUPERFAMILY SSF55048 129 198 5.89E-18 T 13-09-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 PMA3_RS19520 1d90a204215e1a0b23cd55fef572ca2d 130 Pfam PF02635 DsrE/DsrF-like family 1 127 9.5E-21 T 13-09-2016 IPR003787 Sulphur relay, DsrE/F-like protein PMA3_RS19520 1d90a204215e1a0b23cd55fef572ca2d 130 PANTHER PTHR34874:SF1 1 129 5.4E-47 T 13-09-2016 PMA3_RS19520 1d90a204215e1a0b23cd55fef572ca2d 130 Gene3D G3DSA:3.40.1260.10 1 127 2.9E-18 T 13-09-2016 IPR027396 DsrEFH-like PMA3_RS19520 1d90a204215e1a0b23cd55fef572ca2d 130 PANTHER PTHR34874 1 129 5.4E-47 T 13-09-2016 PMA3_RS19520 1d90a204215e1a0b23cd55fef572ca2d 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 127 1.9E-44 T 13-09-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 PMA3_RS19520 1d90a204215e1a0b23cd55fef572ca2d 130 SUPERFAMILY SSF75169 1 127 3.92E-33 T 13-09-2016 IPR027396 DsrEFH-like PMA3_RS23225 d2ed14e583aa1012da94dd34468972a2 278 PANTHER PTHR26312 46 57 1.8E-51 T 13-09-2016 PMA3_RS23225 d2ed14e583aa1012da94dd34468972a2 278 PANTHER PTHR26312 169 278 1.8E-51 T 13-09-2016 PMA3_RS23225 d2ed14e583aa1012da94dd34468972a2 278 Gene3D G3DSA:1.25.40.10 160 269 3.3E-13 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS23225 d2ed14e583aa1012da94dd34468972a2 278 SUPERFAMILY SSF48452 154 271 7.19E-13 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS23225 d2ed14e583aa1012da94dd34468972a2 278 PANTHER PTHR26312:SF74 169 278 1.8E-51 T 13-09-2016 PMA3_RS23225 d2ed14e583aa1012da94dd34468972a2 278 Pfam PF13525 Outer membrane lipoprotein 158 240 5.5E-9 T 13-09-2016 PMA3_RS23225 d2ed14e583aa1012da94dd34468972a2 278 PANTHER PTHR26312:SF74 46 57 1.8E-51 T 13-09-2016 PMA3_RS23225 d2ed14e583aa1012da94dd34468972a2 278 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 158 275 9.5E-40 T 13-09-2016 IPR014162 Tol-Pal system, YbgF PMA3_RS23225 d2ed14e583aa1012da94dd34468972a2 278 Pfam PF16331 TolA binding protein trimerisation 61 117 2.6E-8 T 13-09-2016 IPR032519 YbgF, trimerisation domain GO:0070206 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 12 402 2.5E-85 T 13-09-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 PANTHER PTHR10617:SF103 12 310 1.3E-50 T 13-09-2016 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 PANTHER PTHR10617:SF103 342 411 1.3E-50 T 13-09-2016 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 Gene3D G3DSA:3.50.50.60 351 404 2.8E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 Gene3D G3DSA:3.50.50.60 10 196 2.8E-35 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 PRINTS PR00419 Adrenodoxin reductase family signature 11 33 1.1E-6 T 13-09-2016 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 PRINTS PR00419 Adrenodoxin reductase family signature 34 47 1.1E-6 T 13-09-2016 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 PANTHER PTHR10617 12 310 1.3E-50 T 13-09-2016 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 PANTHER PTHR10617 342 411 1.3E-50 T 13-09-2016 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 32 410 7.2E-163 T 13-09-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 Pfam PF03486 HI0933-like protein 11 403 5.2E-112 T 13-09-2016 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 SUPERFAMILY SSF51905 12 200 2.68E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 SUPERFAMILY SSF51905 349 409 2.68E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS02895 ae21742b7bce21ee0ecca8433db889b2 413 SUPERFAMILY SSF160996 209 350 2.62E-10 T 13-09-2016 PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 SMART SM00357 9 73 1.2E-25 T 13-09-2016 IPR011129 Cold shock protein GO:0003676 PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 SUPERFAMILY SSF50249 6 72 7.59E-23 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 Gene3D G3DSA:2.40.50.140 8 71 1.6E-28 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 PANTHER PTHR11544 9 70 1.5E-34 T 13-09-2016 PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 Pfam PF00313 'Cold-shock' DNA-binding domain 9 72 6.0E-28 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 PANTHER PTHR11544:SF52 9 70 1.5E-34 T 13-09-2016 PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 9 71 1.2E-37 T 13-09-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 ProSitePatterns PS00352 'Cold-shock' domain signature. 21 40 - T 13-09-2016 IPR019844 Cold-shock conserved site PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 PRINTS PR00050 Cold shock protein signature 10 25 7.5E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 PRINTS PR00050 Cold shock protein signature 46 64 7.5E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS19610 4603ca373b58a87789e7b53ffeebc1ed 90 PRINTS PR00050 Cold shock protein signature 31 40 7.5E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS22135 1e247364328db270b6472e7119ac1513 199 Pfam PF02525 Flavodoxin-like fold 3 197 5.5E-52 T 13-09-2016 IPR003680 Flavodoxin-like fold PMA3_RS22135 1e247364328db270b6472e7119ac1513 199 SUPERFAMILY SSF52218 1 198 1.03E-59 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS22135 1e247364328db270b6472e7119ac1513 199 PANTHER PTHR10204 1 199 2.2E-93 T 13-09-2016 PMA3_RS22135 1e247364328db270b6472e7119ac1513 199 Gene3D G3DSA:3.40.50.360 1 199 6.9E-74 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS22135 1e247364328db270b6472e7119ac1513 199 PANTHER PTHR10204:SF16 1 199 2.2E-93 T 13-09-2016 PMA3_RS22135 1e247364328db270b6472e7119ac1513 199 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 33.913 T 13-09-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 PMA3_RS22045 d3fc9390fe048599a2fe1171acad2f61 500 PANTHER PTHR31806:SF2 1 487 3.2E-218 T 13-09-2016 PMA3_RS22045 d3fc9390fe048599a2fe1171acad2f61 500 PIRSF PIRSF002744 1 485 2.9E-99 T 13-09-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PMA3_RS22045 d3fc9390fe048599a2fe1171acad2f61 500 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 20 454 3.0E-50 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS22045 d3fc9390fe048599a2fe1171acad2f61 500 PANTHER PTHR31806 1 487 3.2E-218 T 13-09-2016 PMA3_RS22230 14cc664ac3077e5951606ac40dcaff8f 337 PIRSF PIRSF017082 1 337 2.0E-77 T 13-09-2016 IPR005064 Bordetella uptake gene GO:0030288 PMA3_RS22230 14cc664ac3077e5951606ac40dcaff8f 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 69 332 4.5E-14 T 13-09-2016 IPR005064 Bordetella uptake gene GO:0030288 PMA3_RS22230 14cc664ac3077e5951606ac40dcaff8f 337 PANTHER PTHR30349:SF7 1 296 1.2E-157 T 13-09-2016 PMA3_RS22230 14cc664ac3077e5951606ac40dcaff8f 337 PANTHER PTHR30349 1 296 1.2E-157 T 13-09-2016 PMA3_RS27595 e3114eab604585b4e016990c6b44e7d0 520 PANTHER PTHR30029:SF2 6 510 7.5E-227 T 13-09-2016 PMA3_RS27595 e3114eab604585b4e016990c6b44e7d0 520 Pfam PF04293 SpoVR like protein 16 447 2.1E-175 T 13-09-2016 IPR007390 Sporulation stage V, protein R PMA3_RS27595 e3114eab604585b4e016990c6b44e7d0 520 PANTHER PTHR30029 6 510 7.5E-227 T 13-09-2016 PMA3_RS21705 67807f55bf833fe4cb59ccf2136cf30a 101 Pfam PF13466 STAS domain 16 94 4.3E-12 T 13-09-2016 IPR002645 STAS domain PMA3_RS21705 67807f55bf833fe4cb59ccf2136cf30a 101 SUPERFAMILY SSF52091 7 100 1.45E-20 T 13-09-2016 IPR002645 STAS domain PMA3_RS21705 67807f55bf833fe4cb59ccf2136cf30a 101 Gene3D G3DSA:3.30.750.24 7 100 2.6E-18 T 13-09-2016 IPR002645 STAS domain PMA3_RS02850 038a4e6a6b7c7e7c81c2bcca553a9cfd 358 PANTHER PTHR14859 158 356 3.6E-16 T 13-09-2016 IPR027317 PGAP2-interacting protein PMA3_RS02850 038a4e6a6b7c7e7c81c2bcca553a9cfd 358 Gene3D G3DSA:3.60.10.10 52 352 1.3E-13 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS02850 038a4e6a6b7c7e7c81c2bcca553a9cfd 358 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 55 345 1.2E-15 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS02850 038a4e6a6b7c7e7c81c2bcca553a9cfd 358 PANTHER PTHR14859:SF0 84 138 3.6E-16 T 13-09-2016 PMA3_RS02850 038a4e6a6b7c7e7c81c2bcca553a9cfd 358 PANTHER PTHR14859:SF0 158 356 3.6E-16 T 13-09-2016 PMA3_RS02850 038a4e6a6b7c7e7c81c2bcca553a9cfd 358 PANTHER PTHR14859 84 138 3.6E-16 T 13-09-2016 IPR027317 PGAP2-interacting protein PMA3_RS02850 038a4e6a6b7c7e7c81c2bcca553a9cfd 358 SUPERFAMILY SSF56219 40 356 1.28E-31 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS23010 7cebba77147eb72072f4e651e3db45ea 156 PRINTS PR01483 Fatty acid synthase signature 26 48 3.4E-5 T 13-09-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PMA3_RS23010 7cebba77147eb72072f4e651e3db45ea 156 PRINTS PR01483 Fatty acid synthase signature 48 69 3.4E-5 T 13-09-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PMA3_RS23010 7cebba77147eb72072f4e651e3db45ea 156 SUPERFAMILY SSF54637 5 142 1.76E-42 T 13-09-2016 IPR029069 HotDog domain PMA3_RS23010 7cebba77147eb72072f4e651e3db45ea 156 Pfam PF01575 MaoC like domain 18 115 2.8E-25 T 13-09-2016 IPR002539 MaoC-like domain PMA3_RS23010 7cebba77147eb72072f4e651e3db45ea 156 PANTHER PTHR13078 9 134 2.3E-40 T 13-09-2016 PMA3_RS23010 7cebba77147eb72072f4e651e3db45ea 156 Gene3D G3DSA:3.10.129.10 9 138 7.8E-46 T 13-09-2016 IPR029069 HotDog domain PMA3_RS13210 a35d0752fa596b34374c1f4833a1d387 500 PANTHER PTHR10283:SF93 198 500 1.9E-242 T 13-09-2016 PMA3_RS13210 a35d0752fa596b34374c1f4833a1d387 500 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 500 325.27 T 13-09-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 PMA3_RS13210 a35d0752fa596b34374c1f4833a1d387 500 PANTHER PTHR10283 12 168 1.9E-242 T 13-09-2016 PMA3_RS13210 a35d0752fa596b34374c1f4833a1d387 500 PANTHER PTHR10283:SF93 12 168 1.9E-242 T 13-09-2016 PMA3_RS13210 a35d0752fa596b34374c1f4833a1d387 500 PANTHER PTHR10283 198 500 1.9E-242 T 13-09-2016 PMA3_RS13210 a35d0752fa596b34374c1f4833a1d387 500 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 2 499 4.4E-230 T 13-09-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PANTHER PTHR24322 10 97 8.1E-50 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PANTHER PTHR24322 122 162 8.1E-50 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PANTHER PTHR24322 179 215 8.1E-50 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 198 2.8E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 257 2.8E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.8E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 168 2.8E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.8E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 217 2.8E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 166 194 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PANTHER PTHR24322:SF330 10 97 8.1E-50 T 13-09-2016 PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PANTHER PTHR24322:SF330 122 162 8.1E-50 T 13-09-2016 PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PANTHER PTHR24322:SF330 179 215 8.1E-50 T 13-09-2016 PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 SUPERFAMILY SSF51735 1 273 1.28E-70 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 Pfam PF00106 short chain dehydrogenase 7 223 3.3E-52 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 1.3E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.3E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 198 1.3E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14165 2407978b37bdf195ca90edec35a798ac 274 Gene3D G3DSA:3.40.50.720 2 272 3.3E-78 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS00130 c722df5dd8f6adccf667e07afdb3a5a7 352 SMART SM00729 63 288 8.7E-4 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS00130 c722df5dd8f6adccf667e07afdb3a5a7 352 PANTHER PTHR11228:SF26 11 312 1.7E-98 T 13-09-2016 PMA3_RS00130 c722df5dd8f6adccf667e07afdb3a5a7 352 SUPERFAMILY SSF102114 47 256 4.71E-12 T 13-09-2016 PMA3_RS00130 c722df5dd8f6adccf667e07afdb3a5a7 352 PANTHER PTHR11228 11 312 1.7E-98 T 13-09-2016 PMA3_RS00130 c722df5dd8f6adccf667e07afdb3a5a7 352 Gene3D G3DSA:3.20.20.70 156 257 9.0E-8 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS00130 c722df5dd8f6adccf667e07afdb3a5a7 352 Pfam PF04055 Radical SAM superfamily 67 245 4.6E-15 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS18330 8ebd4952289d9b15de4084b14e0fef3f 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 314 2.6E-101 T 13-09-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PMA3_RS18330 8ebd4952289d9b15de4084b14e0fef3f 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 272 1.4E-73 T 13-09-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PMA3_RS18330 8ebd4952289d9b15de4084b14e0fef3f 332 PANTHER PTHR33376 1 332 5.1E-162 T 13-09-2016 PMA3_RS18330 8ebd4952289d9b15de4084b14e0fef3f 332 PANTHER PTHR33376:SF7 1 332 5.1E-162 T 13-09-2016 PMA3_RS18330 8ebd4952289d9b15de4084b14e0fef3f 332 PIRSF PIRSF006470 1 331 1.1E-121 T 13-09-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PMA3_RS22885 e4f80169f3772082e0c574b69f4acb5e 295 SUPERFAMILY SSF56645 59 164 1.23E-12 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS22885 e4f80169f3772082e0c574b69f4acb5e 295 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 75 162 2.9E-8 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS22885 e4f80169f3772082e0c574b69f4acb5e 295 Gene3D G3DSA:2.40.110.10 85 164 2.9E-8 T 13-09-2016 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 PANTHER PTHR11552 1 555 1.8E-254 T 13-09-2016 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 13-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 PIRSF PIRSF000137 1 539 7.2E-138 T 13-09-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 556 62.758 T 13-09-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 Pfam PF05199 GMC oxidoreductase 395 529 1.2E-39 T 13-09-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 SUPERFAMILY SSF51905 1 295 1.94E-87 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 SUPERFAMILY SSF51905 478 537 1.94E-87 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 Gene3D G3DSA:3.50.50.60 192 320 1.3E-119 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 Gene3D G3DSA:3.50.50.60 2 129 1.3E-119 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 Gene3D G3DSA:3.50.50.60 472 536 1.3E-119 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 PANTHER PTHR11552:SF135 1 555 1.8E-254 T 13-09-2016 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 Pfam PF00732 GMC oxidoreductase 5 302 9.2E-95 T 13-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 13-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 SUPERFAMILY SSF54373 297 479 9.81E-62 T 13-09-2016 PMA3_RS28130 d32bedc2f2e941d36037ca64d678e6df 567 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 539 1.6E-282 T 13-09-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PMA3_RS24865 5eac827d817743d0abca8cee9a23a5ce 300 Gene3D G3DSA:3.40.50.1820 16 290 5.5E-60 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS24865 5eac827d817743d0abca8cee9a23a5ce 300 SUPERFAMILY SSF53474 14 286 1.86E-57 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS24865 5eac827d817743d0abca8cee9a23a5ce 300 PRINTS PR00412 Epoxide hydrolase signature 105 118 1.6E-7 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS24865 5eac827d817743d0abca8cee9a23a5ce 300 PRINTS PR00412 Epoxide hydrolase signature 40 58 1.6E-7 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS24865 5eac827d817743d0abca8cee9a23a5ce 300 PRINTS PR00412 Epoxide hydrolase signature 231 247 1.6E-7 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS24865 5eac827d817743d0abca8cee9a23a5ce 300 PRINTS PR00412 Epoxide hydrolase signature 264 286 1.6E-7 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS24865 5eac827d817743d0abca8cee9a23a5ce 300 PANTHER PTHR10992 3 289 1.1E-89 T 13-09-2016 PMA3_RS24865 5eac827d817743d0abca8cee9a23a5ce 300 Pfam PF00561 alpha/beta hydrolase fold 35 274 1.6E-18 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS24865 5eac827d817743d0abca8cee9a23a5ce 300 PANTHER PTHR10992:SF800 3 289 1.1E-89 T 13-09-2016 PMA3_RS28140 9f5724d0bc457aa7ba8ea71f0ee832b0 445 PANTHER PTHR30624 1 444 8.8E-92 T 13-09-2016 PMA3_RS28140 9f5724d0bc457aa7ba8ea71f0ee832b0 445 Pfam PF01523 Putative modulator of DNA gyrase 31 302 1.5E-20 T 13-09-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS28140 9f5724d0bc457aa7ba8ea71f0ee832b0 445 PANTHER PTHR30624:SF8 1 444 8.8E-92 T 13-09-2016 PMA3_RS28140 9f5724d0bc457aa7ba8ea71f0ee832b0 445 SUPERFAMILY SSF111283 14 444 1.16E-72 T 13-09-2016 PMA3_RS22415 63693de95ab9be1d6817ccd659c62e06 305 PANTHER PTHR30204:SF19 6 141 4.7E-31 T 13-09-2016 PMA3_RS22415 63693de95ab9be1d6817ccd659c62e06 305 Gene3D G3DSA:1.10.1660.10 16 108 3.7E-18 T 13-09-2016 PMA3_RS22415 63693de95ab9be1d6817ccd659c62e06 305 SMART SM00422 14 83 4.4E-18 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS22415 63693de95ab9be1d6817ccd659c62e06 305 SUPERFAMILY SSF46955 16 90 1.74E-16 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS22415 63693de95ab9be1d6817ccd659c62e06 305 PANTHER PTHR30204 6 141 4.7E-31 T 13-09-2016 PMA3_RS22415 63693de95ab9be1d6817ccd659c62e06 305 Pfam PF13411 MerR HTH family regulatory protein 16 80 9.7E-16 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS14385 721acd09e7ffd82adfbe0b8cc5ff80b5 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 5.4E-26 T 13-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PMA3_RS14385 721acd09e7ffd82adfbe0b8cc5ff80b5 324 SUPERFAMILY SSF52283 1 133 5.67E-28 T 13-09-2016 PMA3_RS14385 721acd09e7ffd82adfbe0b8cc5ff80b5 324 Gene3D G3DSA:3.40.50.720 115 289 5.4E-63 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14385 721acd09e7ffd82adfbe0b8cc5ff80b5 324 PANTHER PTHR10996:SF169 2 324 4.5E-127 T 13-09-2016 PMA3_RS14385 721acd09e7ffd82adfbe0b8cc5ff80b5 324 PANTHER PTHR10996 2 324 4.5E-127 T 13-09-2016 PMA3_RS14385 721acd09e7ffd82adfbe0b8cc5ff80b5 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 13-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PMA3_RS14385 721acd09e7ffd82adfbe0b8cc5ff80b5 324 SUPERFAMILY SSF51735 100 287 4.71E-54 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14385 721acd09e7ffd82adfbe0b8cc5ff80b5 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 286 1.6E-57 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS14385 721acd09e7ffd82adfbe0b8cc5ff80b5 324 Gene3D G3DSA:3.40.50.720 3 114 2.9E-28 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10005 d2203267b13239ba058c524720a879d7 463 PANTHER PTHR13847 16 437 1.3E-128 T 13-09-2016 PMA3_RS10005 d2203267b13239ba058c524720a879d7 463 Pfam PF01266 FAD dependent oxidoreductase 28 387 1.7E-49 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS10005 d2203267b13239ba058c524720a879d7 463 Gene3D G3DSA:3.50.50.60 19 118 2.6E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10005 d2203267b13239ba058c524720a879d7 463 Gene3D G3DSA:3.50.50.60 172 250 2.6E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10005 d2203267b13239ba058c524720a879d7 463 Gene3D G3DSA:3.50.50.60 352 399 2.6E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10005 d2203267b13239ba058c524720a879d7 463 SUPERFAMILY SSF51905 17 121 5.55E-39 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10005 d2203267b13239ba058c524720a879d7 463 SUPERFAMILY SSF51905 176 299 5.55E-39 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10005 d2203267b13239ba058c524720a879d7 463 PANTHER PTHR13847:SF208 16 437 1.3E-128 T 13-09-2016 PMA3_RS13570 ccaee1ec5e3628e4d86ddbd873030787 107 Pfam PF13670 Peptidase propeptide and YPEB domain 7 83 3.3E-23 T 13-09-2016 IPR025711 PepSY domain PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 SUPERFAMILY SSF52540 290 521 6.52E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 Gene3D G3DSA:3.40.50.300 290 519 2.2E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 Gene3D G3DSA:3.40.50.300 6 264 1.3E-61 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 PANTHER PTHR24220 292 522 1.4E-125 T 13-09-2016 PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 Pfam PF00005 ABC transporter 306 450 1.9E-27 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 Pfam PF00005 ABC transporter 26 193 9.5E-28 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 SUPERFAMILY SSF52540 9 265 1.91E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 SMART SM00382 315 500 1.5E-4 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 SMART SM00382 34 243 3.4E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 PANTHER PTHR24220:SF568 292 522 1.4E-125 T 13-09-2016 PMA3_RS14465 717ba574e157472c94ac5248f738464d 527 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 243 265 9.0E-6 T 13-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PMA3_RS29780 d4131088aef0119d8b29bc2572832b4a 343 PANTHER PTHR10625:SF121 99 336 2.6E-96 T 13-09-2016 PMA3_RS29780 d4131088aef0119d8b29bc2572832b4a 343 Gene3D G3DSA:3.40.800.20 5 338 5.6E-75 T 13-09-2016 IPR023801 Histone deacetylase domain PMA3_RS29780 d4131088aef0119d8b29bc2572832b4a 343 PANTHER PTHR10625 23 75 2.6E-96 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS29780 d4131088aef0119d8b29bc2572832b4a 343 PANTHER PTHR10625:SF121 23 75 2.6E-96 T 13-09-2016 PMA3_RS29780 d4131088aef0119d8b29bc2572832b4a 343 SUPERFAMILY SSF52768 2 339 2.83E-87 T 13-09-2016 PMA3_RS29780 d4131088aef0119d8b29bc2572832b4a 343 PANTHER PTHR10625 99 336 2.6E-96 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS29780 d4131088aef0119d8b29bc2572832b4a 343 Pfam PF00850 Histone deacetylase domain 28 336 7.4E-66 T 13-09-2016 IPR023801 Histone deacetylase domain PMA3_RS29780 d4131088aef0119d8b29bc2572832b4a 343 PRINTS PR01270 Histone deacetylase superfamily signature 155 178 5.3E-13 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS29780 d4131088aef0119d8b29bc2572832b4a 343 PRINTS PR01270 Histone deacetylase superfamily signature 188 203 5.3E-13 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS29780 d4131088aef0119d8b29bc2572832b4a 343 PRINTS PR01270 Histone deacetylase superfamily signature 274 284 5.3E-13 T 13-09-2016 IPR000286 Histone deacetylase superfamily PMA3_RS07850 8231845bf15ed907c8ac5bf660873016 123 SUPERFAMILY SSF52833 43 121 1.75E-20 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07850 8231845bf15ed907c8ac5bf660873016 123 Gene3D G3DSA:3.40.30.10 50 121 4.2E-23 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07850 8231845bf15ed907c8ac5bf660873016 123 ProSitePatterns PS00195 Glutaredoxin active site. 45 61 - T 13-09-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 PMA3_RS07850 8231845bf15ed907c8ac5bf660873016 123 Pfam PF13417 Glutathione S-transferase, N-terminal domain 45 121 2.0E-13 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS23165 54d4e2a4d227de053752adfc852a6755 449 SUPERFAMILY SSF89796 8 177 1.28E-26 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS23165 54d4e2a4d227de053752adfc852a6755 449 SUPERFAMILY SSF89796 194 399 3.92E-49 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS23165 54d4e2a4d227de053752adfc852a6755 449 Gene3D G3DSA:3.40.50.10540 194 395 8.2E-56 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS23165 54d4e2a4d227de053752adfc852a6755 449 Pfam PF02515 CoA-transferase family III 196 390 2.6E-41 T 13-09-2016 IPR003673 CoA-transferase family III GO:0003824 PMA3_RS23165 54d4e2a4d227de053752adfc852a6755 449 Gene3D G3DSA:3.40.50.10540 8 146 3.2E-7 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS20605 600ed3b700b775ae5b690ad7c9cd00ef 503 PANTHER PTHR30349:SF20 255 484 9.3E-15 T 13-09-2016 PMA3_RS20605 600ed3b700b775ae5b690ad7c9cd00ef 503 Pfam PF00589 Phage integrase family 329 484 1.2E-13 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS20605 600ed3b700b775ae5b690ad7c9cd00ef 503 Gene3D G3DSA:1.10.443.10 319 490 7.9E-26 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS20605 600ed3b700b775ae5b690ad7c9cd00ef 503 PANTHER PTHR30349 255 484 9.3E-15 T 13-09-2016 PMA3_RS20605 600ed3b700b775ae5b690ad7c9cd00ef 503 SUPERFAMILY SSF56349 211 487 4.0E-33 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 Gene3D G3DSA:1.10.10.60 264 312 5.3E-4 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 Pfam PF14525 AraC-binding-like domain 27 189 7.2E-21 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 SUPERFAMILY SSF51215 72 165 8.11E-5 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 SMART SM00342 227 313 1.4E-15 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 PANTHER PTHR11019 65 318 4.6E-33 T 13-09-2016 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 Gene3D G3DSA:2.60.120.280 72 174 3.2E-4 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 Gene3D G3DSA:1.10.10.60 208 263 1.1E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 PANTHER PTHR11019:SF54 65 318 4.6E-33 T 13-09-2016 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 Pfam PF12833 Helix-turn-helix domain 233 315 6.5E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 SUPERFAMILY SSF46689 211 261 2.69E-6 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26265 00d998013172e6f2a27fce9ca2849be7 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 309 - T 13-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 53 67 2.1E-45 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 138 147 2.1E-45 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 2.1E-45 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 91 105 2.1E-45 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 2.1E-45 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 113 132 2.1E-45 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 41 53 2.1E-45 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 77 91 2.1E-45 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 SUPERFAMILY SSF52343 99 223 7.86E-29 T 13-09-2016 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 Gene3D G3DSA:2.40.30.10 7 102 4.2E-28 T 13-09-2016 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 268 276 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 SUPERFAMILY SSF54292 213 319 8.78E-29 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 SUPERFAMILY SSF63380 7 101 6.24E-25 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 Pfam PF00175 Oxidoreductase NAD-binding domain 114 202 3.3E-7 T 13-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 PANTHER PTHR19370:SF113 35 239 9.1E-63 T 13-09-2016 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 Gene3D G3DSA:3.10.20.30 217 317 4.4E-28 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 240 308 1.7E-12 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 Gene3D G3DSA:3.40.50.80 106 216 8.2E-26 T 13-09-2016 PMA3_RS18895 0200efef1c8222ea9c8aed8e0781b00e 319 PANTHER PTHR19370 35 239 9.1E-63 T 13-09-2016 PMA3_RS10270 2f101a9f356f5e9c8151c328caea99f6 283 Gene3D G3DSA:3.40.190.100 110 222 6.9E-37 T 13-09-2016 PMA3_RS10270 2f101a9f356f5e9c8151c328caea99f6 283 PANTHER PTHR30177:SF0 7 273 4.4E-50 T 13-09-2016 PMA3_RS10270 2f101a9f356f5e9c8151c328caea99f6 283 PANTHER PTHR30177 7 273 4.4E-50 T 13-09-2016 PMA3_RS10270 2f101a9f356f5e9c8151c328caea99f6 283 SUPERFAMILY SSF53850 23 279 2.82E-70 T 13-09-2016 PMA3_RS10270 2f101a9f356f5e9c8151c328caea99f6 283 Gene3D G3DSA:3.40.190.10 223 280 2.1E-31 T 13-09-2016 PMA3_RS10270 2f101a9f356f5e9c8151c328caea99f6 283 Gene3D G3DSA:3.40.190.10 23 107 2.1E-31 T 13-09-2016 PMA3_RS10270 2f101a9f356f5e9c8151c328caea99f6 283 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 269 1.0E-59 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS05415 104eca4745e728b1858114e84500cbf5 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS05415 104eca4745e728b1858114e84500cbf5 434 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 29 418 1.4E-141 T 13-09-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 PMA3_RS05415 104eca4745e728b1858114e84500cbf5 434 PANTHER PTHR23508 8 424 6.1E-275 T 13-09-2016 PMA3_RS05415 104eca4745e728b1858114e84500cbf5 434 PANTHER PTHR23508:SF12 8 424 6.1E-275 T 13-09-2016 PMA3_RS05415 104eca4745e728b1858114e84500cbf5 434 SUPERFAMILY SSF103473 18 428 2.88E-67 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS05415 104eca4745e728b1858114e84500cbf5 434 Pfam PF00083 Sugar (and other) transporter 24 220 1.1E-24 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS05415 104eca4745e728b1858114e84500cbf5 434 Pfam PF07690 Major Facilitator Superfamily 270 426 2.4E-12 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS05415 104eca4745e728b1858114e84500cbf5 434 Gene3D G3DSA:1.20.1250.20 244 428 9.6E-22 T 13-09-2016 PMA3_RS05415 104eca4745e728b1858114e84500cbf5 434 Gene3D G3DSA:1.20.1250.20 26 228 4.5E-26 T 13-09-2016 PMA3_RS30170 33cc0f0eede2e04729fc65efa0a2c869 319 PANTHER PTHR11138 4 305 1.4E-118 T 13-09-2016 PMA3_RS30170 33cc0f0eede2e04729fc65efa0a2c869 319 Pfam PF02911 Formyl transferase, C-terminal domain 207 302 5.7E-27 T 13-09-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS30170 33cc0f0eede2e04729fc65efa0a2c869 319 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 306 2.0E-95 T 13-09-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS30170 33cc0f0eede2e04729fc65efa0a2c869 319 Gene3D G3DSA:3.10.25.10 210 310 1.4E-31 T 13-09-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS30170 33cc0f0eede2e04729fc65efa0a2c869 319 Gene3D G3DSA:3.40.50.170 4 208 3.6E-76 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS30170 33cc0f0eede2e04729fc65efa0a2c869 319 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 13-09-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS30170 33cc0f0eede2e04729fc65efa0a2c869 319 SUPERFAMILY SSF53328 5 210 2.75E-68 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS30170 33cc0f0eede2e04729fc65efa0a2c869 319 SUPERFAMILY SSF50486 208 308 6.47E-32 T 13-09-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 PMA3_RS30170 33cc0f0eede2e04729fc65efa0a2c869 319 Pfam PF00551 Formyl transferase 6 184 1.8E-45 T 13-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS30170 33cc0f0eede2e04729fc65efa0a2c869 319 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 305 37.368 T 13-09-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PMA3_RS19400 86a4e520465f1f48f27d94000f2c5d7f 151 SUPERFAMILY SSF55729 1 146 8.06E-26 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19400 86a4e520465f1f48f27d94000f2c5d7f 151 Gene3D G3DSA:3.40.630.30 1 149 1.6E-30 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19400 86a4e520465f1f48f27d94000f2c5d7f 151 Pfam PF13673 Acetyltransferase (GNAT) domain 29 138 7.1E-17 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS19400 86a4e520465f1f48f27d94000f2c5d7f 151 PANTHER PTHR23091 1 151 6.7E-15 T 13-09-2016 PMA3_RS14860 eed794de777f321b85d71687431cc197 336 PANTHER PTHR11019 160 335 5.1E-27 T 13-09-2016 PMA3_RS14860 eed794de777f321b85d71687431cc197 336 SMART SM00342 247 330 5.1E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS14860 eed794de777f321b85d71687431cc197 336 SUPERFAMILY SSF46689 283 331 6.27E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14860 eed794de777f321b85d71687431cc197 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 204 1.3E-41 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS14860 eed794de777f321b85d71687431cc197 336 Gene3D G3DSA:1.10.10.60 283 331 7.8E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14860 eed794de777f321b85d71687431cc197 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 5.5E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS14860 eed794de777f321b85d71687431cc197 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 5.5E-5 T 13-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PMA3_RS14860 eed794de777f321b85d71687431cc197 336 PANTHER PTHR11019:SF52 160 335 5.1E-27 T 13-09-2016 PMA3_RS14860 eed794de777f321b85d71687431cc197 336 Pfam PF12833 Helix-turn-helix domain 254 330 4.1E-16 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS00100 2ac96970062f9e6109bbbfc374fd73f5 183 SUPERFAMILY SSF110111 52 172 7.98E-47 T 13-09-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain PMA3_RS00100 2ac96970062f9e6109bbbfc374fd73f5 183 PANTHER PTHR21320 8 170 5.3E-39 T 13-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PMA3_RS00100 2ac96970062f9e6109bbbfc374fd73f5 183 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 169 2.0E-49 T 13-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PMA3_RS00100 2ac96970062f9e6109bbbfc374fd73f5 183 PIRSF PIRSF005413 1 182 7.2E-65 T 13-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PMA3_RS00100 2ac96970062f9e6109bbbfc374fd73f5 183 Gene3D G3DSA:2.60.370.10 53 177 3.6E-48 T 13-09-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain PMA3_RS00100 2ac96970062f9e6109bbbfc374fd73f5 183 PANTHER PTHR21320:SF3 8 170 5.3E-39 T 13-09-2016 PMA3_RS21080 2357380814a1ad2081c2b1a72f2d259d 134 Gene3D G3DSA:1.10.10.10 3 133 1.0E-31 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21080 2357380814a1ad2081c2b1a72f2d259d 134 PANTHER PTHR33164 3 134 3.1E-27 T 13-09-2016 PMA3_RS21080 2357380814a1ad2081c2b1a72f2d259d 134 Pfam PF01047 MarR family 31 77 1.4E-8 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS21080 2357380814a1ad2081c2b1a72f2d259d 134 SUPERFAMILY SSF46785 3 133 1.85E-30 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21080 2357380814a1ad2081c2b1a72f2d259d 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.8E-6 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS21080 2357380814a1ad2081c2b1a72f2d259d 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.8E-6 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS21080 2357380814a1ad2081c2b1a72f2d259d 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.8E-6 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS21080 2357380814a1ad2081c2b1a72f2d259d 134 SMART SM00347 24 123 5.9E-15 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS21080 2357380814a1ad2081c2b1a72f2d259d 134 PANTHER PTHR33164:SF1 3 134 3.1E-27 T 13-09-2016 PMA3_RS07070 fbd1881c86d478258b1eb939561a9343 295 PANTHER PTHR10120 1 293 6.0E-91 T 13-09-2016 PMA3_RS07070 fbd1881c86d478258b1eb939561a9343 295 PANTHER PTHR10120:SF19 1 293 6.0E-91 T 13-09-2016 PMA3_RS07070 fbd1881c86d478258b1eb939561a9343 295 Hamap MF_00188 Protease HtpX [htpX]. 1 294 24.805 T 13-09-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 PMA3_RS07070 fbd1881c86d478258b1eb939561a9343 295 Gene3D G3DSA:3.30.2010.10 77 164 2.2E-30 T 13-09-2016 PMA3_RS07070 fbd1881c86d478258b1eb939561a9343 295 Pfam PF01435 Peptidase family M48 82 294 1.1E-38 T 13-09-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PMA3_RS12945 37d1203a9fe967ed5a2ef6668092e6dd 122 PANTHER PTHR34310 6 113 1.2E-33 T 13-09-2016 PMA3_RS12945 37d1203a9fe967ed5a2ef6668092e6dd 122 Pfam PF04248 Domain of unknown function (DUF427) 21 111 4.0E-32 T 13-09-2016 IPR007361 Domain of unknown function DUF427 PMA3_RS07570 8dd7db5028ca52b0d310c71fc75c04a4 228 PANTHER PTHR13136 42 227 2.7E-62 T 13-09-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein PMA3_RS07570 8dd7db5028ca52b0d310c71fc75c04a4 228 SUPERFAMILY SSF53474 27 175 6.87E-25 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS07570 8dd7db5028ca52b0d310c71fc75c04a4 228 Gene3D G3DSA:3.40.50.1820 36 225 4.0E-29 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS07570 8dd7db5028ca52b0d310c71fc75c04a4 228 PANTHER PTHR13136:SF4 42 227 2.7E-62 T 13-09-2016 PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 3.7E-37 T 13-09-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 SMART SM00825 Beta-ketoacyl synthase 6 414 4.9E-15 T 13-09-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.2E-58 T 13-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 PIRSF PIRSF000447 1 414 7.5E-188 T 13-09-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 13-09-2016 IPR018201 Beta-ketoacyl synthase, active site PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 Gene3D G3DSA:3.40.47.10 264 412 2.4E-63 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 PANTHER PTHR11712 3 412 7.0E-208 T 13-09-2016 PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 SUPERFAMILY SSF53901 4 252 4.21E-77 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 SUPERFAMILY SSF53901 215 412 1.68E-72 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 5.1E-194 T 13-09-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PMA3_RS06265 b92f07726d51a28bfc3f5b3369800cc7 414 Gene3D G3DSA:3.40.47.10 3 260 3.5E-75 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS01315 7ab352d7faaab8ae840bdfe69ceb729c 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 8.5E-53 T 13-09-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PMA3_RS01315 7ab352d7faaab8ae840bdfe69ceb729c 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.618 T 13-09-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PMA3_RS01315 7ab352d7faaab8ae840bdfe69ceb729c 145 PANTHER PTHR10472 2 145 2.3E-62 T 13-09-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PMA3_RS01315 7ab352d7faaab8ae840bdfe69ceb729c 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 143 3.6E-49 T 13-09-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PMA3_RS01315 7ab352d7faaab8ae840bdfe69ceb729c 145 SUPERFAMILY SSF69500 1 144 3.4E-53 T 13-09-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain PMA3_RS01315 7ab352d7faaab8ae840bdfe69ceb729c 145 Gene3D G3DSA:3.50.80.10 1 144 9.1E-53 T 13-09-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 Gene3D G3DSA:1.10.260.40 1 50 1.4E-21 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 SUPERFAMILY SSF53822 62 329 3.81E-44 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 Gene3D G3DSA:3.40.50.2300 174 312 9.6E-34 T 13-09-2016 PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.0E-5 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.0E-5 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 5.5E-17 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 SMART SM00354 1 73 2.4E-23 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 SUPERFAMILY SSF47413 2 57 4.33E-16 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 69 312 2.4E-38 T 13-09-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 Gene3D G3DSA:3.40.50.2300 51 173 3.1E-20 T 13-09-2016 PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 PANTHER PTHR30146 1 309 5.1E-115 T 13-09-2016 PMA3_RS22745 1fc96625ca0c456979cf8828e2ecb7cb 330 PANTHER PTHR30146:SF36 1 309 5.1E-115 T 13-09-2016 PMA3_RS28125 ddb717d8528d65f9949d84252cb6252f 490 Gene3D G3DSA:3.40.605.10 8 265 3.4E-104 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS28125 ddb717d8528d65f9949d84252cb6252f 490 PANTHER PTHR11699:SF115 1 490 0.0 T 13-09-2016 PMA3_RS28125 ddb717d8528d65f9949d84252cb6252f 490 PANTHER PTHR11699 1 490 0.0 T 13-09-2016 PMA3_RS28125 ddb717d8528d65f9949d84252cb6252f 490 Gene3D G3DSA:3.40.309.10 266 443 3.7E-71 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS28125 ddb717d8528d65f9949d84252cb6252f 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS28125 ddb717d8528d65f9949d84252cb6252f 490 Pfam PF00171 Aldehyde dehydrogenase family 18 479 5.1E-181 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS28125 ddb717d8528d65f9949d84252cb6252f 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS28125 ddb717d8528d65f9949d84252cb6252f 490 SUPERFAMILY SSF53720 6 483 1.23E-172 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS28125 ddb717d8528d65f9949d84252cb6252f 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 5.4E-230 T 13-09-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PMA3_RS28125 ddb717d8528d65f9949d84252cb6252f 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 58.964 T 13-09-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PMA3_RS30195 a6d0458fcc81a126643136ed04691958 325 SMART SM00829 11 323 3.8E-34 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS30195 a6d0458fcc81a126643136ed04691958 325 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 13-09-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PMA3_RS30195 a6d0458fcc81a126643136ed04691958 325 SUPERFAMILY SSF50129 8 142 1.67E-37 T 13-09-2016 IPR011032 GroES-like PMA3_RS30195 a6d0458fcc81a126643136ed04691958 325 Gene3D G3DSA:3.90.180.10 3 146 4.3E-47 T 13-09-2016 IPR011032 GroES-like PMA3_RS30195 a6d0458fcc81a126643136ed04691958 325 Pfam PF00107 Zinc-binding dehydrogenase 152 258 5.0E-26 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS30195 a6d0458fcc81a126643136ed04691958 325 PANTHER PTHR11695 16 325 1.6E-131 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS30195 a6d0458fcc81a126643136ed04691958 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 8.6E-9 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS30195 a6d0458fcc81a126643136ed04691958 325 Gene3D G3DSA:3.40.50.720 147 256 7.0E-27 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30195 a6d0458fcc81a126643136ed04691958 325 SUPERFAMILY SSF51735 113 266 2.49E-44 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS30195 a6d0458fcc81a126643136ed04691958 325 PANTHER PTHR11695:SF605 16 325 1.6E-131 T 13-09-2016 PMA3_RS07140 4c341a73a78348d6fca11c626bcf6d61 104 PANTHER PTHR35893 1 104 6.0E-34 T 13-09-2016 PMA3_RS07140 4c341a73a78348d6fca11c626bcf6d61 104 Pfam PF05957 Bacterial protein of unknown function (DUF883) 13 104 1.1E-32 T 13-09-2016 IPR010279 Protein of unknown function DUF883, ElaB PMA3_RS07140 4c341a73a78348d6fca11c626bcf6d61 104 PANTHER PTHR35893:SF3 1 104 6.0E-34 T 13-09-2016 PMA3_RS25450 0924a4cb8640b73ca41182cffd78b53c 186 Gene3D G3DSA:3.40.80.10 7 182 7.4E-67 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS25450 0924a4cb8640b73ca41182cffd78b53c 186 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 169 6.0E-20 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS25450 0924a4cb8640b73ca41182cffd78b53c 186 PANTHER PTHR30417 8 186 1.1E-76 T 13-09-2016 PMA3_RS25450 0924a4cb8640b73ca41182cffd78b53c 186 SMART SM00644 18 168 1.6E-51 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS25450 0924a4cb8640b73ca41182cffd78b53c 186 SUPERFAMILY SSF55846 6 181 4.19E-64 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS25450 0924a4cb8640b73ca41182cffd78b53c 186 PANTHER PTHR30417:SF4 8 186 1.1E-76 T 13-09-2016 PMA3_RS15865 c81c4ad7bf0214f931cd19db0aba3e16 94 Pfam PF00196 Bacterial regulatory proteins, luxR family 31 85 7.9E-17 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15865 c81c4ad7bf0214f931cd19db0aba3e16 94 SUPERFAMILY SSF46894 19 92 1.53E-16 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS15865 c81c4ad7bf0214f931cd19db0aba3e16 94 PANTHER PTHR26402 31 91 3.7E-20 T 13-09-2016 PMA3_RS15865 c81c4ad7bf0214f931cd19db0aba3e16 94 Gene3D G3DSA:1.10.10.10 30 91 8.1E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15865 c81c4ad7bf0214f931cd19db0aba3e16 94 SMART SM00421 28 85 4.7E-10 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15865 c81c4ad7bf0214f931cd19db0aba3e16 94 PANTHER PTHR26402:SF102 31 91 3.7E-20 T 13-09-2016 PMA3_RS15865 c81c4ad7bf0214f931cd19db0aba3e16 94 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 31 45 7.2E-5 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15865 c81c4ad7bf0214f931cd19db0aba3e16 94 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 61 73 7.2E-5 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15865 c81c4ad7bf0214f931cd19db0aba3e16 94 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 45 61 7.2E-5 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS20400 65092457cae60d1493d224f391d504bc 191 PIRSF PIRSF036382 1 191 5.5E-66 T 13-09-2016 IPR008327 Signal transduction response regulator, antiterminator PMA3_RS20400 65092457cae60d1493d224f391d504bc 191 SMART SM00448 2 113 6.0E-7 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS20400 65092457cae60d1493d224f391d504bc 191 Gene3D G3DSA:1.10.10.10 135 190 3.0E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20400 65092457cae60d1493d224f391d504bc 191 Pfam PF00072 Response regulator receiver domain 4 110 1.0E-7 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS20400 65092457cae60d1493d224f391d504bc 191 SMART SM01012 129 184 1.4E-17 T 13-09-2016 IPR005561 ANTAR domain GO:0003723 PMA3_RS20400 65092457cae60d1493d224f391d504bc 191 SUPERFAMILY SSF52172 1 184 3.56E-44 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS20400 65092457cae60d1493d224f391d504bc 191 PANTHER PTHR26402:SF567 2 183 3.2E-76 T 13-09-2016 PMA3_RS20400 65092457cae60d1493d224f391d504bc 191 PANTHER PTHR26402 2 183 3.2E-76 T 13-09-2016 PMA3_RS20400 65092457cae60d1493d224f391d504bc 191 Gene3D G3DSA:3.40.50.2300 1 123 1.8E-14 T 13-09-2016 PMA3_RS20400 65092457cae60d1493d224f391d504bc 191 Pfam PF03861 ANTAR domain 134 184 3.2E-16 T 13-09-2016 IPR005561 ANTAR domain GO:0003723 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 PANTHER PTHR11811:SF28 1 322 4.6E-153 T 13-09-2016 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 153 3.4E-40 T 13-09-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 SMART SM01350 185 323 1.0E-5 T 13-09-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 258 285 1.1E-18 T 13-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 1.1E-18 T 13-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 174 202 1.1E-18 T 13-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 325 1.2E-118 T 13-09-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 SUPERFAMILY SSF51735 1 160 1.86E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 PANTHER PTHR11811 1 322 4.6E-153 T 13-09-2016 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 185 300 2.9E-21 T 13-09-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 Gene3D G3DSA:1.10.1040.10 187 302 1.5E-34 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 SUPERFAMILY SSF48179 183 306 8.16E-39 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS13195 aacbf4157e44c7049ffcb68c0e56a8c8 326 Gene3D G3DSA:3.40.50.720 1 186 2.3E-50 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS24765 a88ba32521fd1db8077394e35446a8af 527 Pfam PF03929 PepSY-associated TM region 10 366 2.1E-61 T 13-09-2016 IPR005625 PepSY-associated TM protein PMA3_RS24765 a88ba32521fd1db8077394e35446a8af 527 PANTHER PTHR34219:SF4 1 509 1.2E-193 T 13-09-2016 PMA3_RS24765 a88ba32521fd1db8077394e35446a8af 527 PANTHER PTHR34219 1 509 1.2E-193 T 13-09-2016 PMA3_RS03555 53c5684b4ee41577bb19814649e97d85 518 Gene3D G3DSA:3.90.1200.10 125 294 1.5E-8 T 13-09-2016 PMA3_RS03555 53c5684b4ee41577bb19814649e97d85 518 SUPERFAMILY SSF56112 12 294 3.06E-21 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS03555 53c5684b4ee41577bb19814649e97d85 518 PANTHER PTHR12083:SF8 397 511 1.3E-167 T 13-09-2016 PMA3_RS03555 53c5684b4ee41577bb19814649e97d85 518 PANTHER PTHR12083:SF8 8 371 1.3E-167 T 13-09-2016 PMA3_RS03555 53c5684b4ee41577bb19814649e97d85 518 Pfam PF13671 AAA domain 339 485 6.3E-33 T 13-09-2016 PMA3_RS03555 53c5684b4ee41577bb19814649e97d85 518 SUPERFAMILY SSF52540 341 515 2.72E-15 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03555 53c5684b4ee41577bb19814649e97d85 518 Gene3D G3DSA:3.40.50.300 338 470 2.6E-13 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03555 53c5684b4ee41577bb19814649e97d85 518 Pfam PF01636 Phosphotransferase enzyme family 122 280 3.0E-5 T 13-09-2016 IPR002575 Aminoglycoside phosphotransferase PMA3_RS03555 53c5684b4ee41577bb19814649e97d85 518 PANTHER PTHR12083 8 371 1.3E-167 T 13-09-2016 PMA3_RS03555 53c5684b4ee41577bb19814649e97d85 518 PANTHER PTHR12083 397 511 1.3E-167 T 13-09-2016 PMA3_RS28065 0a66430050e6dabe8461fc110c8e3eab 321 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 256 6.5E-15 T 13-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS28065 0a66430050e6dabe8461fc110c8e3eab 321 Gene3D G3DSA:3.40.50.720 6 189 4.9E-42 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28065 0a66430050e6dabe8461fc110c8e3eab 321 SUPERFAMILY SSF48179 188 277 2.21E-15 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS28065 0a66430050e6dabe8461fc110c8e3eab 321 SUPERFAMILY SSF51735 6 185 6.95E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28065 0a66430050e6dabe8461fc110c8e3eab 321 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 11 184 1.5E-40 T 13-09-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS28065 0a66430050e6dabe8461fc110c8e3eab 321 PANTHER PTHR23309 5 315 1.7E-99 T 13-09-2016 PMA3_RS28065 0a66430050e6dabe8461fc110c8e3eab 321 Gene3D G3DSA:1.10.1040.10 190 256 1.8E-9 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS28065 0a66430050e6dabe8461fc110c8e3eab 321 PANTHER PTHR23309:SF17 5 315 1.7E-99 T 13-09-2016 PMA3_RS28065 0a66430050e6dabe8461fc110c8e3eab 321 Hamap MF_02129 L-carnitine dehydrogenase [lcdH]. 8 318 54.594 T 13-09-2016 IPR026578 L-carnitine dehydrogenase KEGG: 00040+1.1.1.10|MetaCyc: PWY-3602|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7472|UniPathway: UPA00117 PMA3_RS29250 de0f26ab2f5bad5b8301e9d49e22290e 219 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 1.9E-17 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS29250 de0f26ab2f5bad5b8301e9d49e22290e 219 Gene3D G3DSA:3.40.30.10 1 79 2.9E-22 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS29250 de0f26ab2f5bad5b8301e9d49e22290e 219 Pfam PF14497 Glutathione S-transferase, C-terminal domain 141 199 1.0E-4 T 13-09-2016 IPR004046 Glutathione S-transferase, C-terminal PMA3_RS29250 de0f26ab2f5bad5b8301e9d49e22290e 219 PANTHER PTHR11260 2 209 1.1E-24 T 13-09-2016 PMA3_RS29250 de0f26ab2f5bad5b8301e9d49e22290e 219 SUPERFAMILY SSF47616 75 205 9.1E-22 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS29250 de0f26ab2f5bad5b8301e9d49e22290e 219 SUPERFAMILY SSF52833 1 95 3.5E-21 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS29250 de0f26ab2f5bad5b8301e9d49e22290e 219 Gene3D G3DSA:1.20.1050.10 80 213 5.8E-31 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS05770 53496ccc01fd4d719d5809233637d4bf 248 Pfam PF07317 Flagellar regulator YcgR 17 121 1.5E-21 T 13-09-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal PMA3_RS05770 53496ccc01fd4d719d5809233637d4bf 248 Gene3D G3DSA:2.30.110.10 14 124 2.2E-48 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS05770 53496ccc01fd4d719d5809233637d4bf 248 Gene3D G3DSA:2.40.10.220 125 247 2.4E-45 T 13-09-2016 PMA3_RS05770 53496ccc01fd4d719d5809233637d4bf 248 Pfam PF07238 PilZ domain 124 235 1.2E-8 T 13-09-2016 IPR009875 PilZ domain GO:0035438 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 68 88 9.1E-67 T 13-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 49 68 9.1E-67 T 13-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 176 196 9.1E-67 T 13-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 197 218 9.1E-67 T 13-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 88 107 9.1E-67 T 13-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 221 246 9.1E-67 T 13-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PANTHER PTHR30587 10 249 6.8E-124 T 13-09-2016 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 169 181 1.8E-23 T 13-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 47 56 1.8E-23 T 13-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 237 247 1.8E-23 T 13-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 147 159 1.8E-23 T 13-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 107 119 1.8E-23 T 13-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 119 133 1.8E-23 T 13-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 51 247 1.2E-86 T 13-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 176 191 - T 13-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 Pfam PF00813 FliP family 51 243 6.4E-79 T 13-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 224 236 - T 13-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PMA3_RS21665 7976bc7ddf3d5cca2c03cee2f6802ab1 252 PANTHER PTHR30587:SF0 10 249 6.8E-124 T 13-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PMA3_RS19445 800baa844d18299c722bb2960564b90c 467 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 22 443 3.9E-51 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS19445 800baa844d18299c722bb2960564b90c 467 PANTHER PTHR31806:SF1 14 467 4.3E-124 T 13-09-2016 PMA3_RS19445 800baa844d18299c722bb2960564b90c 467 PANTHER PTHR31806 14 467 4.3E-124 T 13-09-2016 PMA3_RS19445 800baa844d18299c722bb2960564b90c 467 PIRSF PIRSF002744 1 464 1.7E-100 T 13-09-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PMA3_RS03070 b749e7b380e48484bac88ab33f602c4b 323 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 227 319 1.7E-19 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS03070 b749e7b380e48484bac88ab33f602c4b 323 PANTHER PTHR13748 4 320 1.7E-126 T 13-09-2016 PMA3_RS03070 b749e7b380e48484bac88ab33f602c4b 323 SUPERFAMILY SSF90002 227 319 2.75E-24 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS03070 b749e7b380e48484bac88ab33f602c4b 323 PANTHER PTHR13748:SF43 4 320 1.7E-126 T 13-09-2016 PMA3_RS03070 b749e7b380e48484bac88ab33f602c4b 323 SUPERFAMILY SSF52540 4 194 1.05E-37 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03070 b749e7b380e48484bac88ab33f602c4b 323 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 184 3.5E-52 T 13-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS03070 b749e7b380e48484bac88ab33f602c4b 323 SMART SM00833 227 321 1.6E-13 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS03070 b749e7b380e48484bac88ab33f602c4b 323 Gene3D G3DSA:3.30.1220.10 225 320 7.6E-32 T 13-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PMA3_RS03070 b749e7b380e48484bac88ab33f602c4b 323 Gene3D G3DSA:3.40.50.300 4 204 2.0E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03570 e1d001714e0a646d97f07d0a50efa9d5 111 PIRSF PIRSF006257 2 111 8.1E-35 T 13-09-2016 IPR007384 Protein of unknown function UCP006257 PMA3_RS03570 e1d001714e0a646d97f07d0a50efa9d5 111 PANTHER PTHR39586 3 111 4.8E-29 T 13-09-2016 PMA3_RS03570 e1d001714e0a646d97f07d0a50efa9d5 111 SUPERFAMILY SSF158452 7 108 2.22E-33 T 13-09-2016 IPR023376 YqcC-like domain PMA3_RS03570 e1d001714e0a646d97f07d0a50efa9d5 111 Gene3D G3DSA:1.20.1440.40 7 107 6.9E-32 T 13-09-2016 IPR023376 YqcC-like domain PMA3_RS03570 e1d001714e0a646d97f07d0a50efa9d5 111 Pfam PF04287 tRNA pseudouridine synthase C 8 105 1.1E-30 T 13-09-2016 IPR023376 YqcC-like domain PMA3_RS06720 de498326bd1cb0e341653454dc746946 488 PANTHER PTHR31806 11 485 9.7E-69 T 13-09-2016 PMA3_RS06720 de498326bd1cb0e341653454dc746946 488 PANTHER PTHR31806:SF2 11 485 9.7E-69 T 13-09-2016 PMA3_RS06720 de498326bd1cb0e341653454dc746946 488 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 20 435 5.4E-54 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS06720 de498326bd1cb0e341653454dc746946 488 PIRSF PIRSF002744 1 488 1.4E-90 T 13-09-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PMA3_RS15255 92e12f065567782f25fd81e790228f50 440 SUPERFAMILY SSF103473 5 422 2.35E-83 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS15255 92e12f065567782f25fd81e790228f50 440 PANTHER PTHR11662 3 423 5.5E-138 T 13-09-2016 PMA3_RS15255 92e12f065567782f25fd81e790228f50 440 Pfam PF07690 Major Facilitator Superfamily 19 381 2.8E-45 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS15255 92e12f065567782f25fd81e790228f50 440 Gene3D G3DSA:1.20.1250.20 235 422 1.5E-22 T 13-09-2016 PMA3_RS15255 92e12f065567782f25fd81e790228f50 440 Gene3D G3DSA:1.20.1250.20 10 210 4.7E-40 T 13-09-2016 PMA3_RS15255 92e12f065567782f25fd81e790228f50 440 PANTHER PTHR11662:SF3 3 423 5.5E-138 T 13-09-2016 PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 PANTHER PTHR24220 11 384 2.3E-154 T 13-09-2016 PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 SUPERFAMILY SSF52540 262 487 4.91E-40 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 SMART SM00382 33 222 9.3E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 SMART SM00382 282 477 0.0019 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 Pfam PF00005 ABC transporter 24 174 9.0E-28 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 Pfam PF00005 ABC transporter 274 429 4.3E-16 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 SUPERFAMILY SSF52540 9 232 4.98E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 Gene3D G3DSA:3.40.50.300 273 494 9.1E-43 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 Gene3D G3DSA:3.40.50.300 8 236 5.6E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS09300 7366a0b7cdfc84cdf411daac1b380992 517 PANTHER PTHR24220:SF308 11 384 2.3E-154 T 13-09-2016 PMA3_RS02520 a9c4e42b9457f3293efe1fd574fcfbdc 198 PANTHER PTHR33508 1 194 1.1E-63 T 13-09-2016 PMA3_RS02520 a9c4e42b9457f3293efe1fd574fcfbdc 198 Pfam PF01914 MarC family integral membrane protein 3 195 1.2E-39 T 13-09-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PMA3_RS02520 a9c4e42b9457f3293efe1fd574fcfbdc 198 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 192 3.6E-35 T 13-09-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PMA3_RS02520 a9c4e42b9457f3293efe1fd574fcfbdc 198 PANTHER PTHR33508:SF1 1 194 1.1E-63 T 13-09-2016 PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 PANTHER PTHR11751 19 120 6.0E-24 T 13-09-2016 PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 SUPERFAMILY SSF48008 100 240 1.15E-27 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 SUPERFAMILY SSF46785 13 84 6.23E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 SMART SM00895 104 232 1.9E-24 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 Gene3D G3DSA:1.10.10.10 12 84 1.3E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 Gene3D G3DSA:1.20.120.530 98 243 2.0E-34 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 1.3E-19 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 SMART SM00345 21 80 3.2E-20 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 2.0E-6 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 2.0E-6 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS25270 c30c84de536c61ae382d5856ccea23e3 249 Pfam PF07729 FCD domain 105 231 5.0E-24 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 SUPERFAMILY SSF54826 45 154 8.55E-28 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 SUPERFAMILY SSF51604 137 390 6.29E-60 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 Gene3D G3DSA:3.30.390.10 3 154 3.8E-45 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 Gene3D G3DSA:3.20.20.120 155 379 2.1E-60 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 124 149 - T 13-09-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 Pfam PF13378 Enolase C-terminal domain-like 176 385 1.1E-43 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 SMART SM00922 155 261 7.7E-9 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 PANTHER PTHR13794:SF59 18 392 8.4E-168 T 13-09-2016 PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 59 149 9.6E-13 T 13-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 Hamap MF_01288 L-rhamnonate dehydratase [rhmD]. 1 394 78.323 T 13-09-2016 IPR023444 L-rhamnonate dehydratase GO:0050032 KEGG: 00051+4.2.1.90|MetaCyc: PWY-6713|MetaCyc: PWY-6714 PMA3_RS10165 80eb2a1673bed6ba2ed747ae5a00cc1a 394 PANTHER PTHR13794 18 392 8.4E-168 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS22760 ac64b491d2279d7da1e50ab9fe8a4797 136 Pfam PF04120 Low affinity iron permease 3 116 7.4E-46 T 13-09-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 PMA3_RS25305 87923bc6b3f50b1515e0d902e31bb59e 477 Gene3D G3DSA:2.40.160.10 51 477 1.5E-121 T 13-09-2016 IPR023614 Porin domain PMA3_RS25305 87923bc6b3f50b1515e0d902e31bb59e 477 Pfam PF03573 outer membrane porin, OprD family 45 476 3.4E-122 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS25305 87923bc6b3f50b1515e0d902e31bb59e 477 PANTHER PTHR34596 15 477 4.5E-107 T 13-09-2016 PMA3_RS26065 83977ae02ba4748dc1306d789c163c0b 136 SUPERFAMILY SSF52172 15 130 3.98E-17 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS26065 83977ae02ba4748dc1306d789c163c0b 136 Gene3D G3DSA:3.40.50.2300 14 130 2.1E-16 T 13-09-2016 PMA3_RS26065 83977ae02ba4748dc1306d789c163c0b 136 Pfam PF00072 Response regulator receiver domain 15 97 1.3E-8 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS26065 83977ae02ba4748dc1306d789c163c0b 136 SMART SM00448 13 123 4.3E-4 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS19270 ca0c4da2b56ad757161e3f1592d8ed71 54 Pfam PF11661 Protein of unknown function (DUF2986) 1 42 9.4E-19 T 13-09-2016 IPR021677 Protein of unknown function DUF2986 PMA3_RS19605 02235b29b1fe02ee41c1ef386088a044 127 SUPERFAMILY SSF54736 42 125 5.75E-32 T 13-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PMA3_RS19605 02235b29b1fe02ee41c1ef386088a044 127 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 44 122 2.1E-34 T 13-09-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 PMA3_RS19605 02235b29b1fe02ee41c1ef386088a044 127 Gene3D G3DSA:3.30.1390.10 28 126 4.1E-43 T 13-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PMA3_RS19605 02235b29b1fe02ee41c1ef386088a044 127 PANTHER PTHR33473 14 127 5.5E-39 T 13-09-2016 PMA3_RS19605 02235b29b1fe02ee41c1ef386088a044 127 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 19 121 28.994 T 13-09-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PMA3_RS10565 2400bbb0877aef3156742c98495141db 160 PANTHER PTHR34319 1 160 1.3E-113 T 13-09-2016 PMA3_RS10565 2400bbb0877aef3156742c98495141db 160 Gene3D G3DSA:2.30.110.20 1 157 2.5E-33 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS10565 2400bbb0877aef3156742c98495141db 160 SUPERFAMILY SSF141452 2 158 2.75E-41 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS10565 2400bbb0877aef3156742c98495141db 160 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 159 2.8E-49 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS10565 2400bbb0877aef3156742c98495141db 160 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.6E-35 T 13-09-2016 IPR008514 Type VI secretion system effector, Hcp PMA3_RS10565 2400bbb0877aef3156742c98495141db 160 PANTHER PTHR34319:SF2 1 160 1.3E-113 T 13-09-2016 PMA3_RS27240 d9dac43286d48fa21d0b5cdb26095755 110 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 1.0E-33 T 13-09-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27240 d9dac43286d48fa21d0b5cdb26095755 110 PANTHER PTHR13501 1 109 6.7E-50 T 13-09-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PMA3_RS27240 d9dac43286d48fa21d0b5cdb26095755 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.804 T 13-09-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PMA3_RS27240 d9dac43286d48fa21d0b5cdb26095755 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 8.9E-45 T 13-09-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PMA3_RS27240 d9dac43286d48fa21d0b5cdb26095755 110 SUPERFAMILY SSF54843 1 109 6.8E-42 T 13-09-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27240 d9dac43286d48fa21d0b5cdb26095755 110 Gene3D G3DSA:3.90.470.10 1 109 3.1E-42 T 13-09-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27240 d9dac43286d48fa21d0b5cdb26095755 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 13-09-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS05535 7e198414611c72575fb459195e439add 105 SUPERFAMILY SSF47413 24 64 3.87E-6 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS05535 7e198414611c72575fb459195e439add 105 Gene3D G3DSA:1.10.260.40 25 56 8.2E-6 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS05535 7e198414611c72575fb459195e439add 105 Pfam PF01381 Helix-turn-helix 25 63 3.4E-5 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS00365 b6d6d53440132d1fb61b11bbd9906d75 87 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 22 61 6.0E-5 T 13-09-2016 IPR024487 Cellulose biosynthesis protein BcsR PMA3_RS00365 b6d6d53440132d1fb61b11bbd9906d75 87 Pfam PF10945 Cellulose biosynthesis protein BcsR 21 60 1.9E-13 T 13-09-2016 IPR024487 Cellulose biosynthesis protein BcsR PMA3_RS28445 a5b8750f97b7414a3fb2523f831ab98d 167 Gene3D G3DSA:3.40.50.2020 8 156 4.9E-34 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS28445 a5b8750f97b7414a3fb2523f831ab98d 167 PANTHER PTHR11608 1 158 1.8E-61 T 13-09-2016 PMA3_RS28445 a5b8750f97b7414a3fb2523f831ab98d 167 SUPERFAMILY SSF53271 8 157 2.88E-31 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS28445 a5b8750f97b7414a3fb2523f831ab98d 167 Pfam PF00156 Phosphoribosyl transferase domain 32 135 1.7E-14 T 13-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PMA3_RS17895 b146df54e01ddabdfd0e747fbf99c4ca 117 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 93 111 - T 13-09-2016 IPR019897 RidA, conserved site PMA3_RS17895 b146df54e01ddabdfd0e747fbf99c4ca 117 Pfam PF01042 Endoribonuclease L-PSP 5 116 2.9E-23 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS17895 b146df54e01ddabdfd0e747fbf99c4ca 117 SUPERFAMILY SSF55298 4 116 1.54E-29 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS17895 b146df54e01ddabdfd0e747fbf99c4ca 117 Gene3D G3DSA:3.30.1330.40 6 116 1.1E-25 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS17895 b146df54e01ddabdfd0e747fbf99c4ca 117 PANTHER PTHR11803 12 116 1.8E-31 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS16905 03dd328b31522b5147f0bb1055fafe38 704 SUPERFAMILY SSF160246 490 625 1.8E-19 T 13-09-2016 PMA3_RS16905 03dd328b31522b5147f0bb1055fafe38 704 SUPERFAMILY SSF53448 73 368 1.05E-10 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS16905 03dd328b31522b5147f0bb1055fafe38 704 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 526 630 1.7E-9 T 13-09-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 PMA3_RS16905 03dd328b31522b5147f0bb1055fafe38 704 Pfam PF13632 Glycosyl transferase family group 2 167 383 1.3E-46 T 13-09-2016 IPR001173 Glycosyltransferase 2-like PMA3_RS00860 5178f118fee01bbb83690977cccc7b4b 143 SUPERFAMILY SSF54637 6 141 1.37E-38 T 13-09-2016 IPR029069 HotDog domain PMA3_RS00860 5178f118fee01bbb83690977cccc7b4b 143 PANTHER PTHR31793 6 143 7.5E-67 T 13-09-2016 PMA3_RS00860 5178f118fee01bbb83690977cccc7b4b 143 Gene3D G3DSA:3.10.129.10 5 142 1.7E-50 T 13-09-2016 IPR029069 HotDog domain PMA3_RS00860 5178f118fee01bbb83690977cccc7b4b 143 Pfam PF13279 Thioesterase-like superfamily 20 134 5.3E-14 T 13-09-2016 PMA3_RS00860 5178f118fee01bbb83690977cccc7b4b 143 PANTHER PTHR31793:SF7 6 143 7.5E-67 T 13-09-2016 PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 221 1.6E-5 T 13-09-2016 PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 242 262 1.6E-5 T 13-09-2016 PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 222 241 1.6E-5 T 13-09-2016 PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 Pfam PF00691 OmpA family 158 253 3.8E-24 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 SUPERFAMILY SSF103088 140 258 3.27E-34 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 PANTHER PTHR30128 145 269 1.2E-36 T 13-09-2016 PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 PRINTS PR01021 OMPA domain signature 189 204 5.0E-9 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 PRINTS PR01021 OMPA domain signature 204 220 5.0E-9 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 PRINTS PR01021 OMPA domain signature 159 181 5.0E-9 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 Pfam PF14346 Domain of unknown function (DUF4398) 17 116 2.5E-18 T 13-09-2016 IPR025511 Domain of unknown function DUF4398 PMA3_RS06805 977d3964ac849ad31b83090eb618d290 270 Gene3D G3DSA:3.30.1330.60 148 259 2.1E-36 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS20910 d6282f5172d3a25f2e12a6deab756352 297 Pfam PF00483 Nucleotidyl transferase 7 243 8.8E-70 T 13-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PMA3_RS20910 d6282f5172d3a25f2e12a6deab756352 297 SUPERFAMILY SSF53448 6 291 3.83E-91 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS20910 d6282f5172d3a25f2e12a6deab756352 297 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 7 291 9.2E-156 T 13-09-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PMA3_RS20910 d6282f5172d3a25f2e12a6deab756352 297 PANTHER PTHR22572 7 271 1.3E-176 T 13-09-2016 PMA3_RS20910 d6282f5172d3a25f2e12a6deab756352 297 Gene3D G3DSA:3.90.550.10 6 269 1.7E-67 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS20910 d6282f5172d3a25f2e12a6deab756352 297 PANTHER PTHR22572:SF105 7 271 1.3E-176 T 13-09-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PMA3_RS09640 db2990f0adda8cc553785ccf8b913863 349 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 205 227 - T 13-09-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS09640 db2990f0adda8cc553785ccf8b913863 349 PIRSF PIRSF036497 1 346 3.7E-102 T 13-09-2016 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS09640 db2990f0adda8cc553785ccf8b913863 349 Pfam PF00742 Homoserine dehydrogenase 160 338 4.6E-58 T 13-09-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PMA3_RS09640 db2990f0adda8cc553785ccf8b913863 349 PANTHER PTHR21499:SF2 6 344 4.3E-96 T 13-09-2016 PMA3_RS09640 db2990f0adda8cc553785ccf8b913863 349 SUPERFAMILY SSF55347 160 325 3.4E-49 T 13-09-2016 PMA3_RS09640 db2990f0adda8cc553785ccf8b913863 349 Gene3D G3DSA:3.40.50.720 3 171 5.4E-38 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09640 db2990f0adda8cc553785ccf8b913863 349 PANTHER PTHR21499 6 344 4.3E-96 T 13-09-2016 PMA3_RS09640 db2990f0adda8cc553785ccf8b913863 349 SUPERFAMILY SSF51735 4 181 3.64E-17 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS09640 db2990f0adda8cc553785ccf8b913863 349 Gene3D G3DSA:3.30.360.10 172 321 2.2E-50 T 13-09-2016 PMA3_RS07320 7aca74f125a2f84458388f373d3bb028 300 SUPERFAMILY SSF53807 77 297 7.36E-34 T 13-09-2016 PMA3_RS07320 7aca74f125a2f84458388f373d3bb028 300 Pfam PF01297 Zinc-uptake complex component A periplasmic 125 281 2.2E-16 T 13-09-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PMA3_RS07320 7aca74f125a2f84458388f373d3bb028 300 Gene3D G3DSA:3.40.50.1980 133 194 1.3E-5 T 13-09-2016 PMA3_RS07320 7aca74f125a2f84458388f373d3bb028 300 PANTHER PTHR30477:SF15 62 276 2.1E-40 T 13-09-2016 PMA3_RS07320 7aca74f125a2f84458388f373d3bb028 300 PANTHER PTHR30477 62 276 2.1E-40 T 13-09-2016 PMA3_RS07320 7aca74f125a2f84458388f373d3bb028 300 Gene3D G3DSA:3.40.50.1980 201 298 3.6E-7 T 13-09-2016 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 SUPERFAMILY SSF52343 101 224 7.46E-23 T 13-09-2016 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 SUPERFAMILY SSF63380 4 101 5.61E-21 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 Gene3D G3DSA:2.40.30.10 3 101 1.1E-26 T 13-09-2016 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 PANTHER PTHR22924:SF20 1 267 6.6E-57 T 13-09-2016 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 Gene3D G3DSA:3.10.20.30 213 306 7.6E-22 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 Gene3D G3DSA:3.40.50.80 109 212 8.6E-21 T 13-09-2016 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 233 297 2.6E-9 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 91 105 9.9E-29 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 113 132 9.9E-29 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 185 193 9.9E-29 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 28 38 9.9E-29 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 77 91 9.9E-29 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 PRINTS PR00409 Phthalate dioxygenase reductase family signature 138 147 9.9E-29 T 13-09-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 SUPERFAMILY SSF54292 207 305 7.87E-22 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 260 268 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 Pfam PF00970 Oxidoreductase FAD-binding domain 8 100 1.5E-5 T 13-09-2016 IPR008333 Oxidoreductase, FAD-binding domain PMA3_RS11155 66f402b583abe312a478b5e8770d8980 309 PANTHER PTHR22924 1 267 6.6E-57 T 13-09-2016 PMA3_RS09455 0e8b4ecaf85613e7b52da462f32c0169 170 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 112 122 - T 13-09-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 PMA3_RS09455 0e8b4ecaf85613e7b52da462f32c0169 170 Pfam PF00782 Dual specificity phosphatase, catalytic domain 68 163 3.1E-7 T 13-09-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 PMA3_RS09455 0e8b4ecaf85613e7b52da462f32c0169 170 PANTHER PTHR23339 24 170 1.7E-23 T 13-09-2016 PMA3_RS09455 0e8b4ecaf85613e7b52da462f32c0169 170 Gene3D G3DSA:3.90.190.10 12 167 9.0E-35 T 13-09-2016 IPR029021 Protein-tyrosine phosphatase-like PMA3_RS09455 0e8b4ecaf85613e7b52da462f32c0169 170 SUPERFAMILY SSF52799 4 164 2.58E-31 T 13-09-2016 IPR029021 Protein-tyrosine phosphatase-like PMA3_RS09455 0e8b4ecaf85613e7b52da462f32c0169 170 PANTHER PTHR23339:SF64 24 170 1.7E-23 T 13-09-2016 PMA3_RS14375 ae8d74c81e7f1198b025809e6a744909 436 PANTHER PTHR11662:SF3 1 427 2.5E-149 T 13-09-2016 PMA3_RS14375 ae8d74c81e7f1198b025809e6a744909 436 SUPERFAMILY SSF103473 14 430 9.68E-84 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS14375 ae8d74c81e7f1198b025809e6a744909 436 Gene3D G3DSA:1.20.1250.20 251 429 1.5E-19 T 13-09-2016 PMA3_RS14375 ae8d74c81e7f1198b025809e6a744909 436 Gene3D G3DSA:1.20.1250.20 26 224 1.5E-46 T 13-09-2016 PMA3_RS14375 ae8d74c81e7f1198b025809e6a744909 436 Pfam PF07690 Major Facilitator Superfamily 32 393 4.1E-46 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS14375 ae8d74c81e7f1198b025809e6a744909 436 PANTHER PTHR11662 1 427 2.5E-149 T 13-09-2016 PMA3_RS25030 78d78f6bc37eecc504251fa71740c509 350 PANTHER PTHR11751 3 350 6.4E-117 T 13-09-2016 PMA3_RS25030 78d78f6bc37eecc504251fa71740c509 350 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 13-09-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PMA3_RS25030 78d78f6bc37eecc504251fa71740c509 350 Gene3D G3DSA:3.40.640.10 38 252 7.2E-63 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS25030 78d78f6bc37eecc504251fa71740c509 350 Gene3D G3DSA:3.90.1150.10 253 349 2.0E-25 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS25030 78d78f6bc37eecc504251fa71740c509 350 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 348 1.5E-91 T 13-09-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PMA3_RS25030 78d78f6bc37eecc504251fa71740c509 350 SUPERFAMILY SSF53383 5 349 4.87E-78 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS25030 78d78f6bc37eecc504251fa71740c509 350 PANTHER PTHR11751:SF398 3 350 6.4E-117 T 13-09-2016 PMA3_RS25030 78d78f6bc37eecc504251fa71740c509 350 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 350 56.285 T 13-09-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PMA3_RS25030 78d78f6bc37eecc504251fa71740c509 350 Pfam PF00155 Aminotransferase class I and II 25 345 7.4E-55 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 Pfam PF00682 HMGL-like 9 267 8.3E-77 T 13-09-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 Gene3D G3DSA:1.10.8.60 278 340 4.7E-33 T 13-09-2016 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 275 339 1.0E-27 T 13-09-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 Pfam PF07836 DmpG-like communication domain 277 337 3.5E-30 T 13-09-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 PANTHER PTHR10277 6 336 6.0E-124 T 13-09-2016 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 SUPERFAMILY SSF89000 291 339 1.18E-18 T 13-09-2016 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 340 220.502 T 13-09-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 7 340 1.1E-180 T 13-09-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 SUPERFAMILY SSF51569 5 279 7.69E-68 T 13-09-2016 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 PANTHER PTHR10277:SF3 6 336 6.0E-124 T 13-09-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PMA3_RS18070 daaa0c3840f6c8ff7be6729c0a3f93e9 340 Gene3D G3DSA:3.20.20.70 4 267 6.5E-57 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS11310 5483480371852b1c0b65445c1c4d7aff 229 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 4 155 4.3E-33 T 13-09-2016 IPR017734 Type VI secretion system, lipoprotein SciN PMA3_RS11310 5483480371852b1c0b65445c1c4d7aff 229 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 2 158 5.8E-36 T 13-09-2016 IPR017734 Type VI secretion system, lipoprotein SciN PMA3_RS11310 5483480371852b1c0b65445c1c4d7aff 229 PANTHER PTHR37625 1 166 6.0E-20 T 13-09-2016 PMA3_RS25335 e7907be0615064696b72f1c5a0528f84 393 PANTHER PTHR23517 1 393 2.1E-42 T 13-09-2016 PMA3_RS25335 e7907be0615064696b72f1c5a0528f84 393 Gene3D G3DSA:1.20.1250.20 20 188 5.9E-18 T 13-09-2016 PMA3_RS25335 e7907be0615064696b72f1c5a0528f84 393 Gene3D G3DSA:1.20.1250.20 214 389 1.5E-23 T 13-09-2016 PMA3_RS25335 e7907be0615064696b72f1c5a0528f84 393 SUPERFAMILY SSF103473 19 389 2.09E-46 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS25335 e7907be0615064696b72f1c5a0528f84 393 Pfam PF07690 Major Facilitator Superfamily 26 246 2.7E-23 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS03700 6fadd1d1ca8dae63be231bb8d93e569b 437 PANTHER PTHR23508 3 396 6.9E-161 T 13-09-2016 PMA3_RS03700 6fadd1d1ca8dae63be231bb8d93e569b 437 Gene3D G3DSA:1.20.1250.20 34 219 6.9E-22 T 13-09-2016 PMA3_RS03700 6fadd1d1ca8dae63be231bb8d93e569b 437 Gene3D G3DSA:1.20.1250.20 248 420 1.3E-7 T 13-09-2016 PMA3_RS03700 6fadd1d1ca8dae63be231bb8d93e569b 437 Pfam PF07690 Major Facilitator Superfamily 63 387 9.5E-30 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS03700 6fadd1d1ca8dae63be231bb8d93e569b 437 PANTHER PTHR23508:SF5 3 396 6.9E-161 T 13-09-2016 PMA3_RS03700 6fadd1d1ca8dae63be231bb8d93e569b 437 SUPERFAMILY SSF103473 8 423 2.09E-55 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS03700 6fadd1d1ca8dae63be231bb8d93e569b 437 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS10750 f30459c328efbe2738c572e8dfa442af 104 SUPERFAMILY SSF54909 1 104 1.07E-33 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS10750 f30459c328efbe2738c572e8dfa442af 104 Gene3D G3DSA:3.30.70.900 1 104 1.9E-33 T 13-09-2016 PMA3_RS10750 f30459c328efbe2738c572e8dfa442af 104 Pfam PF07978 NIPSNAP 3 102 2.9E-29 T 13-09-2016 IPR012577 NIPSNAP PMA3_RS10750 f30459c328efbe2738c572e8dfa442af 104 PANTHER PTHR21017 3 104 1.6E-28 T 13-09-2016 PMA3_RS00730 9eccb197b36805b7626d69c5d9335c33 308 Gene3D G3DSA:2.160.10.10 191 298 6.7E-27 T 13-09-2016 PMA3_RS00730 9eccb197b36805b7626d69c5d9335c33 308 PANTHER PTHR23416 55 299 7.6E-88 T 13-09-2016 PMA3_RS00730 9eccb197b36805b7626d69c5d9335c33 308 SUPERFAMILY SSF51161 114 293 6.93E-44 T 13-09-2016 IPR011004 Trimeric LpxA-like PMA3_RS00730 9eccb197b36805b7626d69c5d9335c33 308 PANTHER PTHR23416:SF65 55 299 7.6E-88 T 13-09-2016 PMA3_RS00730 9eccb197b36805b7626d69c5d9335c33 308 Gene3D G3DSA:1.10.3130.10 39 190 3.3E-41 T 13-09-2016 PMA3_RS00730 9eccb197b36805b7626d69c5d9335c33 308 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 252 286 4.5E-6 T 13-09-2016 IPR001451 Hexapeptide repeat PMA3_RS19065 67ea63aaa603ed11450eb36736e943cb 271 Gene3D G3DSA:3.60.110.10 1 256 1.3E-69 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS19065 67ea63aaa603ed11450eb36736e943cb 271 SUPERFAMILY SSF56317 1 251 8.89E-70 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS19065 67ea63aaa603ed11450eb36736e943cb 271 Pfam PF00795 Carbon-nitrogen hydrolase 5 241 3.3E-47 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS19065 67ea63aaa603ed11450eb36736e943cb 271 PANTHER PTHR23088 1 261 1.5E-72 T 13-09-2016 PMA3_RS12630 62f8761e91bac1b46472d16f8240dce4 470 Pfam PF01425 Amidase 28 448 1.9E-96 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS12630 62f8761e91bac1b46472d16f8240dce4 470 PANTHER PTHR11895 6 465 2.5E-119 T 13-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS12630 62f8761e91bac1b46472d16f8240dce4 470 Gene3D G3DSA:3.90.1300.10 3 462 1.5E-127 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS12630 62f8761e91bac1b46472d16f8240dce4 470 SUPERFAMILY SSF75304 4 458 7.46E-132 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS07060 60496718a5a100cf25a676910dceedf1 255 Gene3D G3DSA:3.40.830.10 2 255 1.2E-94 T 13-09-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PMA3_RS07060 60496718a5a100cf25a676910dceedf1 255 PANTHER PTHR30096 1 255 3.0E-97 T 13-09-2016 PMA3_RS07060 60496718a5a100cf25a676910dceedf1 255 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 255 1.6E-48 T 13-09-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PMA3_RS07060 60496718a5a100cf25a676910dceedf1 255 SUPERFAMILY SSF53213 1 255 4.71E-90 T 13-09-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PMA3_RS07060 60496718a5a100cf25a676910dceedf1 255 PIRSF PIRSF006157 1 255 1.2E-90 T 13-09-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 PMA3_RS25130 5492ee0f92d17f8550638aa8f0df70e3 297 PANTHER PTHR11040 12 19 2.2E-66 T 13-09-2016 PMA3_RS25130 5492ee0f92d17f8550638aa8f0df70e3 297 PANTHER PTHR11040 37 296 2.2E-66 T 13-09-2016 PMA3_RS25130 5492ee0f92d17f8550638aa8f0df70e3 297 Pfam PF02535 ZIP Zinc transporter 154 292 1.6E-17 T 13-09-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PMA3_RS25130 5492ee0f92d17f8550638aa8f0df70e3 297 PANTHER PTHR11040:SF33 12 19 2.2E-66 T 13-09-2016 PMA3_RS25130 5492ee0f92d17f8550638aa8f0df70e3 297 PANTHER PTHR11040:SF33 37 296 2.2E-66 T 13-09-2016 PMA3_RS18180 251785078cf9f0978f4adb7b35490c78 408 SUPERFAMILY SSF56935 27 407 1.83E-114 T 13-09-2016 PMA3_RS18180 251785078cf9f0978f4adb7b35490c78 408 Gene3D G3DSA:2.40.170.10 27 407 5.4E-113 T 13-09-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PMA3_RS18180 251785078cf9f0978f4adb7b35490c78 408 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 33 402 7.0E-145 T 13-09-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PMA3_RS18180 251785078cf9f0978f4adb7b35490c78 408 Pfam PF02264 LamB porin 28 407 2.9E-118 T 13-09-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PMA3_RS18180 251785078cf9f0978f4adb7b35490c78 408 PANTHER PTHR38762 2 407 1.0E-45 T 13-09-2016 PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 PANTHER PTHR10909 1 477 3.0E-259 T 13-09-2016 PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 454 7.2E-22 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 588 2.7E-33 T 13-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 4.6E-16 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 SUPERFAMILY SSF56645 38 277 2.49E-55 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 2.7E-12 T 13-09-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 PANTHER PTHR10909:SF296 1 477 3.0E-259 T 13-09-2016 PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 Gene3D G3DSA:1.20.140.10 269 460 1.8E-50 T 13-09-2016 PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 Gene3D G3DSA:2.40.110.10 162 268 5.3E-26 T 13-09-2016 PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 3.5E-10 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 Gene3D G3DSA:1.10.540.10 38 160 3.0E-14 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS10435 a78e84dcceaedcc7e4224f2f383dd423 592 SUPERFAMILY SSF47203 289 466 5.48E-47 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS07535 e607ce35bacc64aaf2e7658a97b612a5 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 4 45 2.4E-9 T 13-09-2016 IPR008621 Cbb3-type cytochrome oxidase component PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 PANTHER PTHR11986 537 968 1.1E-149 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 Gene3D G3DSA:3.90.1150.10 851 968 1.9E-31 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 779 817 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 PANTHER PTHR11986:SF23 537 968 1.1E-149 T 13-09-2016 PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 Gene3D G3DSA:3.30.200.20 41 103 1.3E-4 T 13-09-2016 PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 Gene3D G3DSA:3.40.640.10 599 850 1.1E-67 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 SUPERFAMILY SSF56112 15 329 5.61E-54 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 Gene3D G3DSA:3.90.1200.10 127 318 1.6E-25 T 13-09-2016 PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 Pfam PF00202 Aminotransferase class-III 569 966 3.6E-73 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 SUPERFAMILY SSF53383 554 967 4.96E-104 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS00920 f6e293b3d25597651199dfbbd09b65f4 970 Pfam PF01636 Phosphotransferase enzyme family 38 275 1.9E-25 T 13-09-2016 IPR002575 Aminoglycoside phosphotransferase PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 PRINTS PR00412 Epoxide hydrolase signature 108 123 4.8E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 PRINTS PR00412 Epoxide hydrolase signature 170 183 4.8E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 PRINTS PR00412 Epoxide hydrolase signature 329 351 4.8E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 PRINTS PR00412 Epoxide hydrolase signature 156 169 4.8E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 PRINTS PR00412 Epoxide hydrolase signature 88 106 4.8E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 Pfam PF00561 alpha/beta hydrolase fold 82 216 3.9E-16 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 Gene3D G3DSA:3.40.50.1820 62 350 4.2E-50 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 PANTHER PTHR10992:SF764 69 193 1.4E-61 T 13-09-2016 PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 PANTHER PTHR10992:SF764 213 354 1.4E-61 T 13-09-2016 PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 PANTHER PTHR10992 69 193 1.4E-61 T 13-09-2016 PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 PANTHER PTHR10992 213 354 1.4E-61 T 13-09-2016 PMA3_RS18235 8a7831b26a18dc419c147dc7db6c5b06 354 SUPERFAMILY SSF53474 62 350 4.55E-51 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS06020 0decb4cac1b66982af295412567180c2 268 PANTHER PTHR10992 47 258 5.1E-14 T 13-09-2016 PMA3_RS06020 0decb4cac1b66982af295412567180c2 268 Pfam PF12697 Alpha/beta hydrolase family 5 249 1.7E-11 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS06020 0decb4cac1b66982af295412567180c2 268 Gene3D G3DSA:3.40.50.1820 5 256 1.6E-26 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS06020 0decb4cac1b66982af295412567180c2 268 SUPERFAMILY SSF53474 5 254 1.16E-26 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS09600 54e568a82e93f422fed2b8f3989e1fd0 211 Pfam PF01810 LysE type translocator 17 208 1.2E-29 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS09600 54e568a82e93f422fed2b8f3989e1fd0 211 PANTHER PTHR30086 3 209 3.1E-29 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS19725 f79e1decac65cb18df2b5666bcaea149 510 Pfam PF00361 Proton-conducting membrane transporter 134 433 2.1E-69 T 13-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PMA3_RS19725 f79e1decac65cb18df2b5666bcaea149 510 PANTHER PTHR22773:SF40 1 492 2.2E-182 T 13-09-2016 PMA3_RS19725 f79e1decac65cb18df2b5666bcaea149 510 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 497 4.1E-172 T 13-09-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 PMA3_RS19725 f79e1decac65cb18df2b5666bcaea149 510 PANTHER PTHR22773 1 492 2.2E-182 T 13-09-2016 PMA3_RS19725 f79e1decac65cb18df2b5666bcaea149 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 339 358 6.5E-37 T 13-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PMA3_RS19725 f79e1decac65cb18df2b5666bcaea149 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 6.5E-37 T 13-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PMA3_RS19725 f79e1decac65cb18df2b5666bcaea149 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 176 200 6.5E-37 T 13-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PMA3_RS19725 f79e1decac65cb18df2b5666bcaea149 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 391 417 6.5E-37 T 13-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PMA3_RS19725 f79e1decac65cb18df2b5666bcaea149 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 6.5E-37 T 13-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 Gene3D G3DSA:4.10.640.10 8 74 8.6E-31 T 13-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 Pfam PF01084 Ribosomal protein S18 19 68 5.8E-25 T 13-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 13-09-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 19.875 T 13-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 2.0E-22 T 13-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 PANTHER PTHR13479 2 76 2.2E-28 T 13-09-2016 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 1.7E-34 T 13-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 SUPERFAMILY SSF46911 3 74 5.75E-27 T 13-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 5.7E-16 T 13-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 5.7E-16 T 13-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 5.7E-16 T 13-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS02130 43c9362340d30656f1174f09dc0d509d 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 5.7E-16 T 13-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS20590 f5ed80cd3808e2c3f0ae3238ea5d5fbd 106 PANTHER PTHR34068 1 103 3.3E-30 T 13-09-2016 PMA3_RS20590 f5ed80cd3808e2c3f0ae3238ea5d5fbd 106 SUPERFAMILY SSF117782 1 105 3.14E-33 T 13-09-2016 IPR002765 Uncharacterised protein family UPF0145 PMA3_RS20590 f5ed80cd3808e2c3f0ae3238ea5d5fbd 106 Gene3D G3DSA:3.30.110.70 1 105 1.1E-31 T 13-09-2016 IPR002765 Uncharacterised protein family UPF0145 PMA3_RS20590 f5ed80cd3808e2c3f0ae3238ea5d5fbd 106 Pfam PF01906 Putative heavy-metal-binding 1 105 1.5E-33 T 13-09-2016 IPR002765 Uncharacterised protein family UPF0145 PMA3_RS20590 f5ed80cd3808e2c3f0ae3238ea5d5fbd 106 PANTHER PTHR34068:SF1 1 103 3.3E-30 T 13-09-2016 PMA3_RS20590 f5ed80cd3808e2c3f0ae3238ea5d5fbd 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 21.922 T 13-09-2016 IPR002765 Uncharacterised protein family UPF0145 PMA3_RS17615 545e6e997643b4808ff8dff3857a238d 182 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 94 180 5.3E-5 T 13-09-2016 IPR007690 Type II secretion system, protein M GO:0006858 PMA3_RS17615 545e6e997643b4808ff8dff3857a238d 182 Gene3D G3DSA:3.30.70.60 83 178 2.3E-4 T 13-09-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PMA3_RS26825 909db5b534ec367e3ef441b4f958c310 292 PANTHER PTHR35149 1 292 5.4E-62 T 13-09-2016 PMA3_RS26825 909db5b534ec367e3ef441b4f958c310 292 PANTHER PTHR35149:SF2 1 292 5.4E-62 T 13-09-2016 PMA3_RS26825 909db5b534ec367e3ef441b4f958c310 292 Pfam PF03235 Protein of unknown function DUF262 11 231 2.6E-35 T 13-09-2016 IPR004919 Domain of unknown function DUF262 PMA3_RS04705 7772e3b8a5b9f4155f7dca98766c63b5 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 3.3E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS04705 7772e3b8a5b9f4155f7dca98766c63b5 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 3.3E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS04705 7772e3b8a5b9f4155f7dca98766c63b5 214 PANTHER PTHR30055:SF76 6 210 1.6E-39 T 13-09-2016 PMA3_RS04705 7772e3b8a5b9f4155f7dca98766c63b5 214 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 155 209 3.1E-11 T 13-09-2016 PMA3_RS04705 7772e3b8a5b9f4155f7dca98766c63b5 214 Gene3D G3DSA:1.10.10.60 13 63 3.6E-21 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS04705 7772e3b8a5b9f4155f7dca98766c63b5 214 PANTHER PTHR30055 6 210 1.6E-39 T 13-09-2016 PMA3_RS04705 7772e3b8a5b9f4155f7dca98766c63b5 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.1E-15 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS04705 7772e3b8a5b9f4155f7dca98766c63b5 214 Gene3D G3DSA:1.10.357.10 64 212 1.2E-37 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS04705 7772e3b8a5b9f4155f7dca98766c63b5 214 SUPERFAMILY SSF46689 13 85 4.49E-18 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS11340 ebd042412c7004251f5b0b4627c9ab28 177 PANTHER PTHR35850 2 177 1.2E-75 T 13-09-2016 PMA3_RS11340 ebd042412c7004251f5b0b4627c9ab28 177 PANTHER PTHR35850:SF1 2 177 1.2E-75 T 13-09-2016 PMA3_RS11340 ebd042412c7004251f5b0b4627c9ab28 177 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 164 3.6E-61 T 13-09-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PMA3_RS11340 ebd042412c7004251f5b0b4627c9ab28 177 PIRSF PIRSF028301 2 176 5.5E-70 T 13-09-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PMA3_RS11340 ebd042412c7004251f5b0b4627c9ab28 177 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 164 2.0E-61 T 13-09-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PMA3_RS18115 cf90c4facd80a35daee25cc3f191b57e 178 PANTHER PTHR30466 18 177 2.6E-51 T 13-09-2016 PMA3_RS18115 cf90c4facd80a35daee25cc3f191b57e 178 PANTHER PTHR30466:SF7 18 177 2.6E-51 T 13-09-2016 PMA3_RS18115 cf90c4facd80a35daee25cc3f191b57e 178 SMART SM00903 27 176 1.6E-51 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS18115 cf90c4facd80a35daee25cc3f191b57e 178 Gene3D G3DSA:2.30.110.10 23 177 1.9E-47 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS18115 cf90c4facd80a35daee25cc3f191b57e 178 Pfam PF01613 Flavin reductase like domain 27 178 3.6E-37 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS18115 cf90c4facd80a35daee25cc3f191b57e 178 SUPERFAMILY SSF50475 25 177 3.68E-42 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS11995 83b306cb4fbf7d9208b6271afc4773ee 297 SUPERFAMILY SSF103481 191 286 2.09E-13 T 13-09-2016 PMA3_RS11995 83b306cb4fbf7d9208b6271afc4773ee 297 Pfam PF00892 EamA-like transporter family 14 139 4.8E-10 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS11995 83b306cb4fbf7d9208b6271afc4773ee 297 Pfam PF00892 EamA-like transporter family 154 282 6.7E-16 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS11995 83b306cb4fbf7d9208b6271afc4773ee 297 PANTHER PTHR22911 1 294 7.7E-74 T 13-09-2016 PMA3_RS11995 83b306cb4fbf7d9208b6271afc4773ee 297 PANTHER PTHR22911:SF44 1 294 7.7E-74 T 13-09-2016 PMA3_RS11995 83b306cb4fbf7d9208b6271afc4773ee 297 SUPERFAMILY SSF103481 39 141 1.57E-11 T 13-09-2016 PMA3_RS01900 c80a4d2625e874ebb167817f63a1d8b2 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 5.8E-67 T 13-09-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 PMA3_RS01900 c80a4d2625e874ebb167817f63a1d8b2 425 SUPERFAMILY SSF53756 54 417 1.37E-15 T 13-09-2016 PMA3_RS01900 c80a4d2625e874ebb167817f63a1d8b2 425 PANTHER PTHR23417:SF2 192 423 1.5E-129 T 13-09-2016 PMA3_RS01900 c80a4d2625e874ebb167817f63a1d8b2 425 PANTHER PTHR23417:SF2 1 113 1.5E-129 T 13-09-2016 PMA3_RS01900 c80a4d2625e874ebb167817f63a1d8b2 425 PANTHER PTHR23417 132 142 1.5E-129 T 13-09-2016 PMA3_RS01900 c80a4d2625e874ebb167817f63a1d8b2 425 Pfam PF00534 Glycosyl transferases group 1 236 401 1.1E-6 T 13-09-2016 IPR001296 Glycosyl transferase, family 1 PMA3_RS01900 c80a4d2625e874ebb167817f63a1d8b2 425 PANTHER PTHR23417 192 423 1.5E-129 T 13-09-2016 PMA3_RS01900 c80a4d2625e874ebb167817f63a1d8b2 425 PANTHER PTHR23417 1 113 1.5E-129 T 13-09-2016 PMA3_RS01900 c80a4d2625e874ebb167817f63a1d8b2 425 PANTHER PTHR23417:SF2 132 142 1.5E-129 T 13-09-2016 PMA3_RS24190 f102b5510d2324fc7c981045ef4814f1 382 SUPERFAMILY SSF53383 4 379 1.02E-102 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS24190 f102b5510d2324fc7c981045ef4814f1 382 PANTHER PTHR11751:SF301 5 379 2.6E-141 T 13-09-2016 PMA3_RS24190 f102b5510d2324fc7c981045ef4814f1 382 Gene3D G3DSA:3.40.640.10 39 266 3.4E-79 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS24190 f102b5510d2324fc7c981045ef4814f1 382 PANTHER PTHR11751 5 379 2.6E-141 T 13-09-2016 PMA3_RS24190 f102b5510d2324fc7c981045ef4814f1 382 Gene3D G3DSA:3.90.1150.10 267 379 2.8E-17 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS24190 f102b5510d2324fc7c981045ef4814f1 382 Pfam PF00155 Aminotransferase class I and II 27 379 1.3E-60 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS07240 0f95f4495891383f03397cfb08fa1436 600 PANTHER PTHR13943:SF48 45 118 7.2E-203 T 13-09-2016 PMA3_RS07240 0f95f4495891383f03397cfb08fa1436 600 PANTHER PTHR13943:SF48 141 584 7.2E-203 T 13-09-2016 PMA3_RS07240 0f95f4495891383f03397cfb08fa1436 600 Pfam PF07287 Protein of unknown function (DUF1446) 11 353 3.2E-126 T 13-09-2016 IPR010839 Protein of unknown function DUF1446 PMA3_RS07240 0f95f4495891383f03397cfb08fa1436 600 PANTHER PTHR13943 45 118 7.2E-203 T 13-09-2016 PMA3_RS07240 0f95f4495891383f03397cfb08fa1436 600 PANTHER PTHR13943 141 584 7.2E-203 T 13-09-2016 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 Gene3D G3DSA:3.40.1500.10 3 301 1.1E-135 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 276 55.458 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 PANTHER PTHR10755 6 302 4.2E-188 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 SUPERFAMILY SSF102886 4 301 7.85E-137 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 PRINTS PR00073 Coprogen oxidase signature 161 190 4.4E-86 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 PRINTS PR00073 Coprogen oxidase signature 233 260 4.4E-86 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 PRINTS PR00073 Coprogen oxidase signature 30 46 4.4E-86 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 PRINTS PR00073 Coprogen oxidase signature 47 68 4.4E-86 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 PRINTS PR00073 Coprogen oxidase signature 124 146 4.4E-86 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 PRINTS PR00073 Coprogen oxidase signature 261 287 4.4E-86 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 PRINTS PR00073 Coprogen oxidase signature 89 113 4.4E-86 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 PIRSF PIRSF000166 1 302 5.8E-127 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 Pfam PF01218 Coproporphyrinogen III oxidase 8 301 7.4E-131 T 13-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS30200 1c81094b6ca452d08ad74c582d4dcad6 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 165 189 - T 13-09-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS08705 f4458771f6d5ccaada8c74c0a7f9cdf0 232 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS08705 f4458771f6d5ccaada8c74c0a7f9cdf0 232 SUPERFAMILY SSF52540 11 230 3.34E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08705 f4458771f6d5ccaada8c74c0a7f9cdf0 232 SMART SM00382 40 228 5.8E-15 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS08705 f4458771f6d5ccaada8c74c0a7f9cdf0 232 Gene3D G3DSA:3.40.50.300 10 228 2.1E-67 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08705 f4458771f6d5ccaada8c74c0a7f9cdf0 232 PANTHER PTHR24220 13 230 3.3E-116 T 13-09-2016 PMA3_RS08705 f4458771f6d5ccaada8c74c0a7f9cdf0 232 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 11 230 5.2E-99 T 13-09-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 PMA3_RS08705 f4458771f6d5ccaada8c74c0a7f9cdf0 232 PANTHER PTHR24220:SF111 13 230 3.3E-116 T 13-09-2016 PMA3_RS08705 f4458771f6d5ccaada8c74c0a7f9cdf0 232 Pfam PF00005 ABC transporter 32 179 2.3E-34 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS17410 35ae7c893f30b52b5b9f9bac021c08d0 232 SMART SM00882 8 219 3.3E-88 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS17410 35ae7c893f30b52b5b9f9bac021c08d0 232 Gene3D G3DSA:3.40.1080.10 6 217 1.0E-98 T 13-09-2016 PMA3_RS17410 35ae7c893f30b52b5b9f9bac021c08d0 232 SUPERFAMILY SSF100950 5 227 5.98E-88 T 13-09-2016 PMA3_RS17410 35ae7c893f30b52b5b9f9bac021c08d0 232 Pfam PF01144 Coenzyme A transferase 9 217 3.3E-75 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS17410 35ae7c893f30b52b5b9f9bac021c08d0 232 PANTHER PTHR13707 1 232 8.8E-136 T 13-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PMA3_RS17410 35ae7c893f30b52b5b9f9bac021c08d0 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 13-09-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 PMA3_RS17410 35ae7c893f30b52b5b9f9bac021c08d0 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 217 1.1E-74 T 13-09-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.9E-23 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.9E-23 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.9E-23 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.9E-23 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.9E-23 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 PANTHER PTHR11404:SF8 1 192 1.6E-112 T 13-09-2016 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 PANTHER PTHR11404 1 192 1.6E-112 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 SUPERFAMILY SSF54719 82 192 6.15E-45 T 13-09-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 7.0E-40 T 13-09-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 13-09-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 Gene3D G3DSA:1.10.287.990 20 82 4.4E-25 T 13-09-2016 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 PIRSF PIRSF000349 1 198 1.8E-86 T 13-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 SUPERFAMILY SSF46609 1 84 1.7E-35 T 13-09-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS23595 7d08fc7105fa3961ee72b6988a80f25d 198 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 3.1E-35 T 13-09-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PMA3_RS19465 4591ad74d7fa06eec37a7b28f6b0165e 340 Pfam PF00196 Bacterial regulatory proteins, luxR family 272 323 4.9E-13 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19465 4591ad74d7fa06eec37a7b28f6b0165e 340 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 273 287 1.7E-6 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19465 4591ad74d7fa06eec37a7b28f6b0165e 340 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 287 303 1.7E-6 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19465 4591ad74d7fa06eec37a7b28f6b0165e 340 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 303 315 1.7E-6 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19465 4591ad74d7fa06eec37a7b28f6b0165e 340 Gene3D G3DSA:1.10.10.10 273 324 2.8E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19465 4591ad74d7fa06eec37a7b28f6b0165e 340 SMART SM00421 270 327 3.4E-9 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS19465 4591ad74d7fa06eec37a7b28f6b0165e 340 SUPERFAMILY SSF46894 262 324 4.76E-14 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS27975 2b1954bab64bc0bc16012a54fc917498 346 PANTHER PTHR10289:SF8 1 346 7.6E-167 T 13-09-2016 PMA3_RS27975 2b1954bab64bc0bc16012a54fc917498 346 SUPERFAMILY SSF53383 7 344 1.39E-101 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS27975 2b1954bab64bc0bc16012a54fc917498 346 Gene3D G3DSA:3.40.640.10 7 252 4.6E-65 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS27975 2b1954bab64bc0bc16012a54fc917498 346 PIRSF PIRSF038940 5 346 4.6E-141 T 13-09-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 PMA3_RS27975 2b1954bab64bc0bc16012a54fc917498 346 PANTHER PTHR10289 1 346 7.6E-167 T 13-09-2016 PMA3_RS27975 2b1954bab64bc0bc16012a54fc917498 346 Pfam PF01212 Beta-eliminating lyase 7 296 4.1E-77 T 13-09-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 PMA3_RS27975 2b1954bab64bc0bc16012a54fc917498 346 Gene3D G3DSA:3.90.1150.10 257 343 3.2E-17 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS05255 e20660183d598b4556f2e4daebd99455 363 PANTHER PTHR30128:SF11 126 275 8.0E-29 T 13-09-2016 PMA3_RS05255 e20660183d598b4556f2e4daebd99455 363 Gene3D G3DSA:3.30.1330.60 145 268 3.1E-23 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS05255 e20660183d598b4556f2e4daebd99455 363 PANTHER PTHR30128 126 275 8.0E-29 T 13-09-2016 PMA3_RS05255 e20660183d598b4556f2e4daebd99455 363 SUPERFAMILY SSF103088 158 270 6.54E-24 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS05255 e20660183d598b4556f2e4daebd99455 363 Pfam PF00691 OmpA family 185 262 1.7E-13 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS21440 9081e466f1a25d31d794bab32178cce2 358 PIRSF PIRSF007313 1 357 2.4E-158 T 13-09-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 PMA3_RS21440 9081e466f1a25d31d794bab32178cce2 358 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 2.3E-162 T 13-09-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 PMA3_RS22725 8306eb0b3bbb54dcf7626924f78000fb 320 SUPERFAMILY SSF161098 83 306 4.58E-61 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS22725 8306eb0b3bbb54dcf7626924f78000fb 320 PANTHER PTHR30406:SF2 1 320 2.5E-94 T 13-09-2016 PMA3_RS22725 8306eb0b3bbb54dcf7626924f78000fb 320 Gene3D G3DSA:1.10.3720.10 87 314 1.3E-62 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS22725 8306eb0b3bbb54dcf7626924f78000fb 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 310 9.9E-22 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS22725 8306eb0b3bbb54dcf7626924f78000fb 320 PANTHER PTHR30406 1 320 2.5E-94 T 13-09-2016 PMA3_RS22110 f84c3bd7769c84f1edbc92483dd5a1b5 432 Pfam PF00924 Mechanosensitive ion channel 150 400 1.6E-43 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS22110 f84c3bd7769c84f1edbc92483dd5a1b5 432 PANTHER PTHR30414:SF0 1 419 1.1E-191 T 13-09-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 PMA3_RS22110 f84c3bd7769c84f1edbc92483dd5a1b5 432 PANTHER PTHR30414 1 419 1.1E-191 T 13-09-2016 PMA3_RS22110 f84c3bd7769c84f1edbc92483dd5a1b5 432 SUPERFAMILY SSF50182 188 255 1.34E-11 T 13-09-2016 IPR010920 LSM domain PMA3_RS22110 f84c3bd7769c84f1edbc92483dd5a1b5 432 Gene3D G3DSA:2.30.30.60 205 255 4.9E-9 T 13-09-2016 PMA3_RS16680 2aadf99325e9803812d7d0ee04f4862d 511 Pfam PF07690 Major Facilitator Superfamily 29 413 1.0E-41 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS16680 2aadf99325e9803812d7d0ee04f4862d 511 SUPERFAMILY SSF103473 475 502 4.05E-57 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS16680 2aadf99325e9803812d7d0ee04f4862d 511 SUPERFAMILY SSF103473 10 207 4.05E-57 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS16680 2aadf99325e9803812d7d0ee04f4862d 511 SUPERFAMILY SSF103473 254 423 4.05E-57 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS16680 2aadf99325e9803812d7d0ee04f4862d 511 Gene3D G3DSA:1.20.1250.20 271 424 1.1E-12 T 13-09-2016 PMA3_RS16680 2aadf99325e9803812d7d0ee04f4862d 511 Gene3D G3DSA:1.20.1250.20 476 500 1.1E-12 T 13-09-2016 PMA3_RS16680 2aadf99325e9803812d7d0ee04f4862d 511 PANTHER PTHR23501:SF65 10 505 1.7E-143 T 13-09-2016 PMA3_RS16680 2aadf99325e9803812d7d0ee04f4862d 511 Gene3D G3DSA:1.20.1250.20 17 201 7.0E-29 T 13-09-2016 PMA3_RS16680 2aadf99325e9803812d7d0ee04f4862d 511 PANTHER PTHR23501 10 505 1.7E-143 T 13-09-2016 PMA3_RS06190 b0c13b96e924b6b866ecb5dec3a7c752 156 Pfam PF01799 [2Fe-2S] binding domain 81 144 3.1E-24 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS06190 b0c13b96e924b6b866ecb5dec3a7c752 156 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 77 2.6E-6 T 13-09-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PMA3_RS06190 b0c13b96e924b6b866ecb5dec3a7c752 156 Gene3D G3DSA:3.10.20.30 2 73 1.5E-25 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS06190 b0c13b96e924b6b866ecb5dec3a7c752 156 PANTHER PTHR11908 1 134 1.2E-26 T 13-09-2016 PMA3_RS06190 b0c13b96e924b6b866ecb5dec3a7c752 156 SUPERFAMILY SSF54292 2 76 3.28E-24 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS06190 b0c13b96e924b6b866ecb5dec3a7c752 156 SUPERFAMILY SSF47741 83 152 2.22E-28 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS06190 b0c13b96e924b6b866ecb5dec3a7c752 156 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 13-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PMA3_RS06190 b0c13b96e924b6b866ecb5dec3a7c752 156 Gene3D G3DSA:1.10.150.120 74 153 3.6E-28 T 13-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PMA3_RS06190 b0c13b96e924b6b866ecb5dec3a7c752 156 PANTHER PTHR11908:SF66 1 134 1.2E-26 T 13-09-2016 PMA3_RS08635 83dc5061d29fb4389674b3ea803327fe 157 Pfam PF03846 Cell division inhibitor SulA 40 129 1.5E-8 T 13-09-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 PMA3_RS08635 83dc5061d29fb4389674b3ea803327fe 157 Gene3D G3DSA:3.40.50.300 41 155 1.5E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08635 83dc5061d29fb4389674b3ea803327fe 157 SUPERFAMILY SSF52540 41 155 4.62E-28 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS08635 83dc5061d29fb4389674b3ea803327fe 157 PANTHER PTHR35369 30 155 8.4E-17 T 13-09-2016 PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 PANTHER PTHR30023 18 480 1.4E-81 T 13-09-2016 PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 64 456 8.9E-67 T 13-09-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 SUPERFAMILY SSF56601 29 478 2.31E-89 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 356 370 2.2E-21 T 13-09-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 433 446 2.2E-21 T 13-09-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 70 89 2.2E-21 T 13-09-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 296 318 2.2E-21 T 13-09-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 371 385 2.2E-21 T 13-09-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 PANTHER PTHR30023:SF0 18 480 1.4E-81 T 13-09-2016 PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 33 457 1.8E-85 T 13-09-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PMA3_RS20375 20d5c47435b7b2c865077ff418978ada 486 Gene3D G3DSA:3.40.710.10 238 476 4.5E-63 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS16820 819e7bc21e8725583b58c033acf54fc0 184 Pfam PF01292 Prokaryotic cytochrome b561 9 179 1.8E-12 T 13-09-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PMA3_RS16820 819e7bc21e8725583b58c033acf54fc0 184 PANTHER PTHR30529 2 183 3.8E-16 T 13-09-2016 PMA3_RS16820 819e7bc21e8725583b58c033acf54fc0 184 SUPERFAMILY SSF81342 8 179 5.26E-12 T 13-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PMA3_RS19920 6caacc9f3aff427593c0c4e2f7e4f8d1 55 Pfam PF02069 Prokaryotic metallothionein 8 51 1.9E-10 T 13-09-2016 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 PMA3_RS19920 6caacc9f3aff427593c0c4e2f7e4f8d1 55 SUPERFAMILY SSF57868 7 52 3.77E-7 T 13-09-2016 IPR017854 Metallothionein domain GO:0046872 PMA3_RS19920 6caacc9f3aff427593c0c4e2f7e4f8d1 55 Gene3D G3DSA:2.30.170.10 7 52 3.0E-13 T 13-09-2016 PMA3_RS19920 6caacc9f3aff427593c0c4e2f7e4f8d1 55 ProDom PD019076 METALLOTHIONEIN METALLOTHIONEIN ZINC METAL-BINDING CADMIUM CLUSTER MT METAL-THIOLATE COPPER SMTA 8 51 1.0E-8 T 13-09-2016 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 PMA3_RS07855 3971d26bde2f588006f6c8a2731ee0c5 181 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 37.209 T 13-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS07855 3971d26bde2f588006f6c8a2731ee0c5 181 PANTHER PTHR11109 2 181 4.8E-114 T 13-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS07855 3971d26bde2f588006f6c8a2731ee0c5 181 Pfam PF01227 GTP cyclohydrolase I 4 180 5.5E-76 T 13-09-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS07855 3971d26bde2f588006f6c8a2731ee0c5 181 Gene3D G3DSA:1.10.286.10 3 50 3.6E-20 T 13-09-2016 PMA3_RS07855 3971d26bde2f588006f6c8a2731ee0c5 181 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 4 181 3.1E-76 T 13-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS07855 3971d26bde2f588006f6c8a2731ee0c5 181 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 108 118 - T 13-09-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS07855 3971d26bde2f588006f6c8a2731ee0c5 181 Gene3D G3DSA:3.30.1130.10 53 181 1.3E-62 T 13-09-2016 PMA3_RS07855 3971d26bde2f588006f6c8a2731ee0c5 181 SUPERFAMILY SSF55620 3 181 5.56E-78 T 13-09-2016 PMA3_RS07855 3971d26bde2f588006f6c8a2731ee0c5 181 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 13-09-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 SUPERFAMILY SSF50156 386 473 9.33E-15 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 PANTHER PTHR22939:SF98 21 53 2.4E-143 T 13-09-2016 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 PANTHER PTHR22939:SF98 80 387 2.4E-143 T 13-09-2016 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 31 471 1.9E-160 T 13-09-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 Gene3D G3DSA:2.30.42.10 386 475 2.2E-19 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 Gene3D G3DSA:2.30.42.10 273 369 5.6E-29 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 SMART SM00228 385 464 9.1E-11 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 SMART SM00228 271 353 1.6E-15 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 SUPERFAMILY SSF50156 229 354 2.5E-25 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 Gene3D G3DSA:2.40.10.10 163 272 2.1E-45 T 13-09-2016 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 Pfam PF13365 Trypsin-like peptidase domain 99 232 8.4E-37 T 13-09-2016 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 PANTHER PTHR22939 21 53 2.4E-143 T 13-09-2016 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 PANTHER PTHR22939 80 387 2.4E-143 T 13-09-2016 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 PRINTS PR00834 HtrA/DegQ protease family signature 169 193 1.6E-51 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 PRINTS PR00834 HtrA/DegQ protease family signature 129 149 1.6E-51 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 PRINTS PR00834 HtrA/DegQ protease family signature 311 323 1.6E-51 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 PRINTS PR00834 HtrA/DegQ protease family signature 203 220 1.6E-51 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 PRINTS PR00834 HtrA/DegQ protease family signature 108 120 1.6E-51 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 PRINTS PR00834 HtrA/DegQ protease family signature 225 242 1.6E-51 T 13-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 Gene3D G3DSA:2.40.10.10 24 51 1.3E-38 T 13-09-2016 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 Gene3D G3DSA:2.40.10.10 86 162 1.3E-38 T 13-09-2016 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 Pfam PF13180 PDZ domain 272 362 5.9E-15 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 Pfam PF13180 PDZ domain 386 467 1.9E-9 T 13-09-2016 IPR001478 PDZ domain GO:0005515 PMA3_RS22530 ae417c7acdf23364b2333105e1a2e522 475 SUPERFAMILY SSF50494 30 262 7.74E-70 T 13-09-2016 IPR009003 Peptidase S1, PA clan PMA3_RS14540 9d500c3ef2a6b5724c932aea49274136 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.4E-9 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS14540 9d500c3ef2a6b5724c932aea49274136 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.4E-9 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS14540 9d500c3ef2a6b5724c932aea49274136 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.4E-9 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS14540 9d500c3ef2a6b5724c932aea49274136 100 PANTHER PTHR33154:SF2 1 97 3.5E-30 T 13-09-2016 PMA3_RS14540 9d500c3ef2a6b5724c932aea49274136 100 Pfam PF12840 Helix-turn-helix domain 16 72 7.8E-14 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14540 9d500c3ef2a6b5724c932aea49274136 100 SMART SM00418 16 93 2.5E-16 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS14540 9d500c3ef2a6b5724c932aea49274136 100 Gene3D G3DSA:1.10.10.10 14 95 8.1E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14540 9d500c3ef2a6b5724c932aea49274136 100 PANTHER PTHR33154 1 97 3.5E-30 T 13-09-2016 PMA3_RS14540 9d500c3ef2a6b5724c932aea49274136 100 SUPERFAMILY SSF46785 13 93 4.01E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16125 b9207e8da6ea147b9eb9efe649b9f21e 440 Pfam PF00589 Phage integrase family 220 391 1.7E-14 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS16125 b9207e8da6ea147b9eb9efe649b9f21e 440 Pfam PF13356 Domain of unknown function (DUF4102) 8 93 8.0E-18 T 13-09-2016 IPR025166 Domain of unknown function DUF4102 PMA3_RS16125 b9207e8da6ea147b9eb9efe649b9f21e 440 PANTHER PTHR30629:SF4 2 418 2.7E-121 T 13-09-2016 PMA3_RS16125 b9207e8da6ea147b9eb9efe649b9f21e 440 Gene3D G3DSA:1.10.443.10 219 391 2.4E-17 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS16125 b9207e8da6ea147b9eb9efe649b9f21e 440 PANTHER PTHR30629 2 418 2.7E-121 T 13-09-2016 PMA3_RS16125 b9207e8da6ea147b9eb9efe649b9f21e 440 SUPERFAMILY SSF56349 104 393 2.24E-46 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS16125 b9207e8da6ea147b9eb9efe649b9f21e 440 Gene3D G3DSA:1.10.150.130 104 201 1.3E-12 T 13-09-2016 IPR023109 Integrase/recombinase, N-terminal PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 597 5.4E-33 T 13-09-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 SUPERFAMILY SSF69279 199 375 2.21E-33 T 13-09-2016 PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 Gene3D G3DSA:2.40.50.230 381 461 8.1E-31 T 13-09-2016 IPR006531 Gp5 N-terminal PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 PANTHER PTHR32305:SF7 12 723 9.5E-112 T 13-09-2016 PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 18 508 2.7E-154 T 13-09-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 PANTHER PTHR32305 12 723 9.5E-112 T 13-09-2016 PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 Gene3D G3DSA:3.55.50.10 106 198 4.2E-31 T 13-09-2016 PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 SUPERFAMILY SSF69279 18 194 5.53E-57 T 13-09-2016 PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 SUPERFAMILY SSF69255 375 462 7.59E-27 T 13-09-2016 PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 Pfam PF05954 Phage late control gene D protein (GPD) 37 345 3.1E-100 T 13-09-2016 PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 31 516 2.5E-117 T 13-09-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 SUPERFAMILY SSF69349 452 510 4.16E-7 T 13-09-2016 PMA3_RS08015 e30888251d85322201e04979bd31e1e8 853 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 627 769 1.2E-42 T 13-09-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PMA3_RS00095 99c6a4260f177dd391422d643cf820d6 295 Gene3D G3DSA:1.10.287.70 2 75 2.7E-19 T 13-09-2016 PMA3_RS00095 99c6a4260f177dd391422d643cf820d6 295 Gene3D G3DSA:1.20.120.80 79 294 6.3E-69 T 13-09-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 PMA3_RS00095 99c6a4260f177dd391422d643cf820d6 295 Pfam PF00510 Cytochrome c oxidase subunit III 7 120 2.2E-11 T 13-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PMA3_RS00095 99c6a4260f177dd391422d643cf820d6 295 Pfam PF00510 Cytochrome c oxidase subunit III 154 294 4.3E-43 T 13-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PMA3_RS00095 99c6a4260f177dd391422d643cf820d6 295 SUPERFAMILY SSF81452 3 295 1.96E-84 T 13-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PMA3_RS00095 99c6a4260f177dd391422d643cf820d6 295 PANTHER PTHR11403 1 120 1.1E-117 T 13-09-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 PMA3_RS00095 99c6a4260f177dd391422d643cf820d6 295 PANTHER PTHR11403 150 295 1.1E-117 T 13-09-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 PMA3_RS00095 99c6a4260f177dd391422d643cf820d6 295 PANTHER PTHR11403:SF0 1 120 1.1E-117 T 13-09-2016 PMA3_RS00095 99c6a4260f177dd391422d643cf820d6 295 PANTHER PTHR11403:SF0 150 295 1.1E-117 T 13-09-2016 PMA3_RS14665 df9e7b4a4bb5c80815e895bc8d3c35a6 233 Pfam PF04199 Putative cyclase 6 173 3.1E-31 T 13-09-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 PMA3_RS14665 df9e7b4a4bb5c80815e895bc8d3c35a6 233 PANTHER PTHR31118 4 232 5.6E-30 T 13-09-2016 PMA3_RS14665 df9e7b4a4bb5c80815e895bc8d3c35a6 233 Gene3D G3DSA:3.50.30.50 3 232 9.6E-57 T 13-09-2016 PMA3_RS14665 df9e7b4a4bb5c80815e895bc8d3c35a6 233 SUPERFAMILY SSF102198 2 231 2.35E-55 T 13-09-2016 PMA3_RS09795 28a13cb3a4242820502d7ad8eb263f5d 512 Gene3D G3DSA:2.30.38.10 324 403 7.1E-16 T 13-09-2016 PMA3_RS09795 28a13cb3a4242820502d7ad8eb263f5d 512 SUPERFAMILY SSF56801 7 506 5.36E-124 T 13-09-2016 PMA3_RS09795 28a13cb3a4242820502d7ad8eb263f5d 512 Gene3D G3DSA:3.40.50.980 166 319 5.9E-35 T 13-09-2016 PMA3_RS09795 28a13cb3a4242820502d7ad8eb263f5d 512 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS09795 28a13cb3a4242820502d7ad8eb263f5d 512 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 493 1.4E-17 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS09795 28a13cb3a4242820502d7ad8eb263f5d 512 Pfam PF00501 AMP-binding enzyme 10 410 4.8E-79 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS09795 28a13cb3a4242820502d7ad8eb263f5d 512 PANTHER PTHR24096 3 502 1.6E-125 T 13-09-2016 PMA3_RS09795 28a13cb3a4242820502d7ad8eb263f5d 512 Gene3D G3DSA:3.30.300.30 405 502 1.5E-29 T 13-09-2016 PMA3_RS09795 28a13cb3a4242820502d7ad8eb263f5d 512 Gene3D G3DSA:3.40.50.980 7 165 3.7E-29 T 13-09-2016 PMA3_RS23405 a05b9f9b5dc9c53519aae511e8ee2ef1 476 SUPERFAMILY SSF53098 4 469 7.59E-128 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS23405 a05b9f9b5dc9c53519aae511e8ee2ef1 476 Gene3D G3DSA:3.30.420.10 3 194 7.1E-76 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS23405 a05b9f9b5dc9c53519aae511e8ee2ef1 476 PANTHER PTHR11046:SF2 3 449 2.7E-233 T 13-09-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 PMA3_RS23405 a05b9f9b5dc9c53519aae511e8ee2ef1 476 PIRSF PIRSF000977 1 475 5.0E-205 T 13-09-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 PMA3_RS23405 a05b9f9b5dc9c53519aae511e8ee2ef1 476 Pfam PF08411 Exonuclease C-terminal 205 468 8.7E-99 T 13-09-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 PMA3_RS23405 a05b9f9b5dc9c53519aae511e8ee2ef1 476 PANTHER PTHR11046 3 449 2.7E-233 T 13-09-2016 PMA3_RS23405 a05b9f9b5dc9c53519aae511e8ee2ef1 476 Pfam PF00929 Exonuclease 6 186 3.3E-23 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS23405 a05b9f9b5dc9c53519aae511e8ee2ef1 476 SMART SM00479 3 196 0.0037 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS24405 de32c613130e04b079e04216024813fe 172 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 2.9E-4 T 13-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PMA3_RS24405 de32c613130e04b079e04216024813fe 172 Pfam PF01641 SelR domain 51 169 1.4E-49 T 13-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PMA3_RS24405 de32c613130e04b079e04216024813fe 172 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 25 4.4E-6 T 13-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PMA3_RS24405 de32c613130e04b079e04216024813fe 172 PANTHER PTHR10173 44 170 1.3E-51 T 13-09-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PMA3_RS24405 de32c613130e04b079e04216024813fe 172 PANTHER PTHR10173:SF18 44 170 1.3E-51 T 13-09-2016 PMA3_RS24405 de32c613130e04b079e04216024813fe 172 SUPERFAMILY SSF51316 46 169 9.94E-56 T 13-09-2016 IPR011057 Mss4-like PMA3_RS24405 de32c613130e04b079e04216024813fe 172 Gene3D G3DSA:2.170.150.20 44 170 4.2E-56 T 13-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PMA3_RS24405 de32c613130e04b079e04216024813fe 172 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 47 170 2.2E-50 T 13-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PMA3_RS14560 675fe49e66daeb1c1b59555cec9aad9e 366 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 12 344 2.8E-68 T 13-09-2016 IPR010640 Low temperature requirement A PMA3_RS14560 675fe49e66daeb1c1b59555cec9aad9e 366 PANTHER PTHR36840 11 341 4.0E-53 T 13-09-2016 PMA3_RS14560 675fe49e66daeb1c1b59555cec9aad9e 366 PANTHER PTHR36840:SF1 11 341 4.0E-53 T 13-09-2016 PMA3_RS05150 ba2afaea65d3e93219b9d4663ce8ed70 217 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 8 215 3.5E-69 T 13-09-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated PMA3_RS05150 ba2afaea65d3e93219b9d4663ce8ed70 217 PANTHER PTHR39323:SF1 6 215 4.5E-36 T 13-09-2016 PMA3_RS05150 ba2afaea65d3e93219b9d4663ce8ed70 217 PIRSF PIRSF000887 7 213 3.8E-48 T 13-09-2016 IPR024173 Phosphoesterase, MJ0037 PMA3_RS05150 ba2afaea65d3e93219b9d4663ce8ed70 217 SUPERFAMILY SSF56300 30 166 1.49E-13 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS05150 ba2afaea65d3e93219b9d4663ce8ed70 217 Pfam PF00149 Calcineurin-like phosphoesterase 30 119 2.4E-5 T 13-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PMA3_RS05150 ba2afaea65d3e93219b9d4663ce8ed70 217 Gene3D G3DSA:3.60.21.10 30 164 3.1E-8 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS05150 ba2afaea65d3e93219b9d4663ce8ed70 217 Gene3D G3DSA:3.60.21.10 197 210 3.1E-8 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS05150 ba2afaea65d3e93219b9d4663ce8ed70 217 PANTHER PTHR39323 6 215 4.5E-36 T 13-09-2016 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 SUPERFAMILY SSF51905 270 347 4.33E-33 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 SUPERFAMILY SSF51905 492 554 4.33E-33 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 SUPERFAMILY SSF51905 14 229 4.33E-33 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 PANTHER PTHR11632:SF59 27 234 2.7E-43 T 13-09-2016 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 Gene3D G3DSA:3.50.50.60 18 224 2.7E-59 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 Gene3D G3DSA:3.50.50.60 489 552 2.7E-59 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 Gene3D G3DSA:3.50.50.60 266 330 2.7E-59 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 Gene3D G3DSA:3.90.700.10 343 476 3.5E-21 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 PANTHER PTHR11632:SF59 271 517 2.7E-43 T 13-09-2016 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 PANTHER PTHR11632 271 517 2.7E-43 T 13-09-2016 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 SUPERFAMILY SSF56425 343 477 3.84E-20 T 13-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 PANTHER PTHR11632 27 234 2.7E-43 T 13-09-2016 PMA3_RS11585 a3eb1a5334cfca02acafd83992c8a652 565 Pfam PF00890 FAD binding domain 31 522 6.6E-38 T 13-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PMA3_RS03565 55c850534f59e349d286ec6797fc936c 244 SUPERFAMILY SSF48452 143 240 1.14E-8 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS03565 55c850534f59e349d286ec6797fc936c 244 Gene3D G3DSA:1.25.40.10 144 234 1.3E-9 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS16585 d272f5e3aae01e6df5225c5796b6c6a9 442 Pfam PF13641 Glycosyltransferase like family 2 66 298 3.5E-20 T 13-09-2016 PMA3_RS16585 d272f5e3aae01e6df5225c5796b6c6a9 442 Gene3D G3DSA:3.90.550.10 66 315 9.0E-28 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS16585 d272f5e3aae01e6df5225c5796b6c6a9 442 PANTHER PTHR10859 50 423 3.7E-63 T 13-09-2016 PMA3_RS16585 d272f5e3aae01e6df5225c5796b6c6a9 442 SUPERFAMILY SSF53448 54 345 1.77E-38 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS16585 d272f5e3aae01e6df5225c5796b6c6a9 442 PANTHER PTHR10859:SF92 50 423 3.7E-63 T 13-09-2016 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 PANTHER PTHR10836:SF35 125 485 1.1E-236 T 13-09-2016 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 303 460 3.6E-48 T 13-09-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 138 298 3.3E-36 T 13-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 SUPERFAMILY SSF51735 138 314 4.61E-44 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 PANTHER PTHR10836 125 485 1.1E-236 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 296 303 - T 13-09-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 SMART SM00846 137 298 1.4E-51 T 13-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 319 335 1.5E-18 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 375 392 1.5E-18 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 417 432 1.5E-18 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 292 310 1.5E-18 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 256 269 1.5E-18 T 13-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 Gene3D G3DSA:3.40.50.720 138 306 2.5E-49 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 SUPERFAMILY SSF55347 298 461 5.95E-56 T 13-09-2016 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 Gene3D G3DSA:3.30.360.10 307 462 1.1E-58 T 13-09-2016 PMA3_RS08675 0371c8e577a7e6577d0648cfdb6e87bc 487 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 139 472 4.1E-111 T 13-09-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 PMA3_RS18220 72b52e31f5d0d075bfb0251a851f2e74 242 Gene3D G3DSA:3.40.50.150 10 166 9.0E-9 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS18220 72b52e31f5d0d075bfb0251a851f2e74 242 PIRSF PIRSF018637 15 242 1.5E-62 T 13-09-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 PMA3_RS18220 72b52e31f5d0d075bfb0251a851f2e74 242 SUPERFAMILY SSF53335 14 164 2.78E-11 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS18220 72b52e31f5d0d075bfb0251a851f2e74 242 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 34 234 4.3E-59 T 13-09-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 PMA3_RS18220 72b52e31f5d0d075bfb0251a851f2e74 242 PANTHER PTHR38451 13 242 2.1E-65 T 13-09-2016 PMA3_RS14160 bc7ea256e972b42e08ad049de09c1fa7 350 Gene3D G3DSA:1.10.10.60 281 332 4.6E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14160 bc7ea256e972b42e08ad049de09c1fa7 350 SUPERFAMILY SSF46689 281 331 2.37E-8 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14160 bc7ea256e972b42e08ad049de09c1fa7 350 PANTHER PTHR11019 257 336 2.6E-15 T 13-09-2016 PMA3_RS14160 bc7ea256e972b42e08ad049de09c1fa7 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 203 1.0E-43 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS14160 bc7ea256e972b42e08ad049de09c1fa7 350 SMART SM00342 246 328 2.5E-13 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS14160 bc7ea256e972b42e08ad049de09c1fa7 350 Pfam PF12833 Helix-turn-helix domain 255 330 3.5E-14 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17435 79fda8b7a9499929b33ff95425b62135 238 SUPERFAMILY SSF53474 35 235 8.11E-46 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS17435 79fda8b7a9499929b33ff95425b62135 238 Pfam PF02230 Phospholipase/Carboxylesterase 36 235 3.5E-32 T 13-09-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 PMA3_RS17435 79fda8b7a9499929b33ff95425b62135 238 PANTHER PTHR10655 36 235 9.1E-40 T 13-09-2016 PMA3_RS17435 79fda8b7a9499929b33ff95425b62135 238 Gene3D G3DSA:3.40.50.1820 18 236 3.0E-59 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS11820 512379b19003421e8adc4d30bcf62a44 265 Gene3D G3DSA:3.40.810.20 6 252 3.1E-61 T 13-09-2016 PMA3_RS11820 512379b19003421e8adc4d30bcf62a44 265 SUPERFAMILY SSF100950 5 251 1.17E-51 T 13-09-2016 PMA3_RS03520 11f7afdefacf9587c36692d61ac7d785 255 Gene3D G3DSA:3.40.50.300 3 238 1.5E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03520 11f7afdefacf9587c36692d61ac7d785 255 SMART SM00382 26 214 5.6E-13 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS03520 11f7afdefacf9587c36692d61ac7d785 255 PANTHER PTHR24220:SF558 3 253 2.6E-90 T 13-09-2016 PMA3_RS03520 11f7afdefacf9587c36692d61ac7d785 255 Pfam PF00005 ABC transporter 17 167 2.9E-26 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS03520 11f7afdefacf9587c36692d61ac7d785 255 SUPERFAMILY SSF52540 2 227 1.41E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03520 11f7afdefacf9587c36692d61ac7d785 255 PANTHER PTHR24220 3 253 2.6E-90 T 13-09-2016 PMA3_RS09415 1f56b3fdd5059a0d3af651107a8ddcbc 165 SUPERFAMILY SSF46785 7 146 1.66E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09415 1f56b3fdd5059a0d3af651107a8ddcbc 165 Pfam PF01047 MarR family 41 98 9.2E-14 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS09415 1f56b3fdd5059a0d3af651107a8ddcbc 165 PANTHER PTHR33164 38 156 2.2E-20 T 13-09-2016 PMA3_RS09415 1f56b3fdd5059a0d3af651107a8ddcbc 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 1.7E-10 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS09415 1f56b3fdd5059a0d3af651107a8ddcbc 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 1.7E-10 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS09415 1f56b3fdd5059a0d3af651107a8ddcbc 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 1.7E-10 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS09415 1f56b3fdd5059a0d3af651107a8ddcbc 165 Gene3D G3DSA:1.10.10.10 4 146 9.3E-31 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09415 1f56b3fdd5059a0d3af651107a8ddcbc 165 SMART SM00347 33 133 1.1E-22 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS09415 1f56b3fdd5059a0d3af651107a8ddcbc 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 106 - T 13-09-2016 IPR023187 Transcriptional regulator MarR-type, conserved site PMA3_RS10190 b1673c0d4b18edf69ce943e36603ccc2 405 Pfam PF11902 Protein of unknown function (DUF3422) 2 401 1.9E-121 T 13-09-2016 IPR021830 Protein of unknown function DUF3422 PMA3_RS19185 8e197bdc4e630d5138fc5a14c01038a1 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 374 1.4E-126 T 13-09-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PMA3_RS19185 8e197bdc4e630d5138fc5a14c01038a1 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 13-09-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PMA3_RS19185 8e197bdc4e630d5138fc5a14c01038a1 382 PANTHER PTHR11496 3 382 5.6E-213 T 13-09-2016 PMA3_RS19185 8e197bdc4e630d5138fc5a14c01038a1 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 13-09-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PMA3_RS19185 8e197bdc4e630d5138fc5a14c01038a1 382 SUPERFAMILY SSF56796 4 380 3.66E-133 T 13-09-2016 PMA3_RS19185 8e197bdc4e630d5138fc5a14c01038a1 382 Gene3D G3DSA:1.20.1090.10 184 382 8.4E-79 T 13-09-2016 PMA3_RS19185 8e197bdc4e630d5138fc5a14c01038a1 382 Gene3D G3DSA:3.40.50.1970 2 183 7.5E-59 T 13-09-2016 PMA3_RS19185 8e197bdc4e630d5138fc5a14c01038a1 382 PANTHER PTHR11496:SF78 3 382 5.6E-213 T 13-09-2016 PMA3_RS28365 6df4eed926260d03508a186f610de5cf 291 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 18 278 1.2E-72 T 13-09-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PMA3_RS28365 6df4eed926260d03508a186f610de5cf 291 PANTHER PTHR30201 11 288 1.5E-77 T 13-09-2016 PMA3_RS28365 6df4eed926260d03508a186f610de5cf 291 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 14 281 7.4E-100 T 13-09-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PMA3_RS28365 6df4eed926260d03508a186f610de5cf 291 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 291 149.567 T 13-09-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PMA3_RS08115 7cce4de6fee29015d50444c29a6d6b98 312 SUPERFAMILY SSF56601 6 279 7.79E-58 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS08115 7cce4de6fee29015d50444c29a6d6b98 312 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 118 135 5.9E-13 T 13-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PMA3_RS08115 7cce4de6fee29015d50444c29a6d6b98 312 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 68 79 5.9E-13 T 13-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PMA3_RS08115 7cce4de6fee29015d50444c29a6d6b98 312 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 145 158 5.9E-13 T 13-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PMA3_RS08115 7cce4de6fee29015d50444c29a6d6b98 312 Gene3D G3DSA:3.40.710.10 37 279 8.4E-64 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS08115 7cce4de6fee29015d50444c29a6d6b98 312 PANTHER PTHR21581:SF8 22 299 4.7E-140 T 13-09-2016 PMA3_RS08115 7cce4de6fee29015d50444c29a6d6b98 312 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 262 7.8E-71 T 13-09-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PMA3_RS08115 7cce4de6fee29015d50444c29a6d6b98 312 PANTHER PTHR21581 22 299 4.7E-140 T 13-09-2016 PMA3_RS16975 ffd8b8d69564aa5ed7ce3e3831b63007 464 PANTHER PTHR11662:SF3 15 435 2.7E-122 T 13-09-2016 PMA3_RS16975 ffd8b8d69564aa5ed7ce3e3831b63007 464 Gene3D G3DSA:1.20.1250.20 20 219 4.4E-45 T 13-09-2016 PMA3_RS16975 ffd8b8d69564aa5ed7ce3e3831b63007 464 Pfam PF07690 Major Facilitator Superfamily 30 391 3.5E-44 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS16975 ffd8b8d69564aa5ed7ce3e3831b63007 464 SUPERFAMILY SSF103473 7 431 1.44E-77 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS16975 ffd8b8d69564aa5ed7ce3e3831b63007 464 Gene3D G3DSA:1.20.1250.20 242 437 1.1E-18 T 13-09-2016 PMA3_RS16975 ffd8b8d69564aa5ed7ce3e3831b63007 464 PANTHER PTHR11662 15 435 2.7E-122 T 13-09-2016 PMA3_RS17390 0a3fde821d9571ec4b96ec72a4bf191f 444 SUPERFAMILY SSF141130 20 113 1.7E-51 T 13-09-2016 PMA3_RS17390 0a3fde821d9571ec4b96ec72a4bf191f 444 SUPERFAMILY SSF141130 152 168 1.7E-51 T 13-09-2016 PMA3_RS17390 0a3fde821d9571ec4b96ec72a4bf191f 444 SUPERFAMILY SSF141130 205 330 1.7E-51 T 13-09-2016 PMA3_RS17390 0a3fde821d9571ec4b96ec72a4bf191f 444 SUPERFAMILY SSF141130 365 428 1.7E-51 T 13-09-2016 PMA3_RS17390 0a3fde821d9571ec4b96ec72a4bf191f 444 Pfam PF03069 Acetamidase/Formamidase family 56 429 5.0E-52 T 13-09-2016 IPR004304 Acetamidase/Formamidase GO:0016811 PMA3_RS17390 0a3fde821d9571ec4b96ec72a4bf191f 444 Gene3D G3DSA:2.60.120.580 211 319 5.3E-45 T 13-09-2016 PMA3_RS17390 0a3fde821d9571ec4b96ec72a4bf191f 444 Gene3D G3DSA:2.60.120.580 20 89 5.3E-45 T 13-09-2016 PMA3_RS17390 0a3fde821d9571ec4b96ec72a4bf191f 444 PANTHER PTHR31891:SF6 261 343 4.9E-12 T 13-09-2016 PMA3_RS17390 0a3fde821d9571ec4b96ec72a4bf191f 444 PANTHER PTHR31891 261 343 4.9E-12 T 13-09-2016 PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 Gene3D G3DSA:3.30.70.920 64 160 7.3E-32 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 PANTHER PTHR30154:SF0 3 160 1.2E-92 T 13-09-2016 PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 Pfam PF13404 AsnC-type helix-turn-helix domain 11 52 4.5E-20 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 SMART SM00344 11 120 2.4E-48 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 Gene3D G3DSA:1.10.10.10 12 63 2.2E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 1.4E-21 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 SUPERFAMILY SSF46785 10 69 1.09E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 SUPERFAMILY SSF54909 73 160 5.23E-21 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 13-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 PANTHER PTHR30154 3 160 1.2E-92 T 13-09-2016 PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 1.1E-20 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 1.1E-20 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS29425 8af71da2236ecf159bef8dd9b4f271d7 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 1.1E-20 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS07585 0cf6e5505a8cac334cc32c4e1cc94161 268 PIRSF PIRSF005902 1 267 2.6E-65 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS07585 0cf6e5505a8cac334cc32c4e1cc94161 268 PANTHER PTHR10060:SF13 1 266 5.6E-143 T 13-09-2016 PMA3_RS07585 0cf6e5505a8cac334cc32c4e1cc94161 268 SUPERFAMILY SSF51556 3 264 3.81E-77 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS07585 0cf6e5505a8cac334cc32c4e1cc94161 268 PANTHER PTHR10060 1 266 5.6E-143 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS07585 0cf6e5505a8cac334cc32c4e1cc94161 268 Pfam PF01026 TatD related DNase 4 262 7.2E-61 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS07585 0cf6e5505a8cac334cc32c4e1cc94161 268 Gene3D G3DSA:3.20.20.140 1 264 2.7E-82 T 13-09-2016 PMA3_RS02125 a9e3de8654b6b1b85b15ce4d2e5d4240 140 PANTHER PTHR21011 1 134 2.1E-36 T 13-09-2016 PMA3_RS02125 a9e3de8654b6b1b85b15ce4d2e5d4240 140 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 5.8E-33 T 13-09-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS02125 a9e3de8654b6b1b85b15ce4d2e5d4240 140 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-25 T 13-09-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS02125 a9e3de8654b6b1b85b15ce4d2e5d4240 140 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 13-09-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS02125 a9e3de8654b6b1b85b15ce4d2e5d4240 140 Gene3D G3DSA:3.30.70.60 1 103 1.8E-39 T 13-09-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PMA3_RS02125 a9e3de8654b6b1b85b15ce4d2e5d4240 140 SUPERFAMILY SSF54995 1 102 1.01E-35 T 13-09-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS02125 a9e3de8654b6b1b85b15ce4d2e5d4240 140 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.826 T 13-09-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 PMA3_RS02125 a9e3de8654b6b1b85b15ce4d2e5d4240 140 PANTHER PTHR21011:SF1 1 134 2.1E-36 T 13-09-2016 PMA3_RS08750 1ffc1b2b8ace14fe9e456fbb5a516d69 393 Gene3D G3DSA:3.40.50.2300 6 147 1.7E-38 T 13-09-2016 PMA3_RS08750 1ffc1b2b8ace14fe9e456fbb5a516d69 393 SMART SM00448 6 118 6.9E-35 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS08750 1ffc1b2b8ace14fe9e456fbb5a516d69 393 SUPERFAMILY SSF52172 5 147 2.42E-40 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS08750 1ffc1b2b8ace14fe9e456fbb5a516d69 393 Pfam PF00072 Response regulator receiver domain 9 110 1.1E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS08750 1ffc1b2b8ace14fe9e456fbb5a516d69 393 PANTHER PTHR26402 194 203 4.4E-38 T 13-09-2016 PMA3_RS08750 1ffc1b2b8ace14fe9e456fbb5a516d69 393 PANTHER PTHR26402 6 136 4.4E-38 T 13-09-2016 PMA3_RS08750 1ffc1b2b8ace14fe9e456fbb5a516d69 393 SMART SM00331 174 391 3.4E-10 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS08750 1ffc1b2b8ace14fe9e456fbb5a516d69 393 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 201 391 2.5E-31 T 13-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PMA3_RS12035 9cd6302068d1114b8e89899b4cd4bfaf 260 PANTHER PTHR30151 7 255 2.4E-114 T 13-09-2016 PMA3_RS12035 9cd6302068d1114b8e89899b4cd4bfaf 260 SUPERFAMILY SSF161098 57 238 1.96E-30 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12035 9cd6302068d1114b8e89899b4cd4bfaf 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 252 1.7E-21 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12035 9cd6302068d1114b8e89899b4cd4bfaf 260 Gene3D G3DSA:1.10.3720.10 57 247 1.6E-24 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12035 9cd6302068d1114b8e89899b4cd4bfaf 260 PANTHER PTHR30151:SF12 7 255 2.4E-114 T 13-09-2016 PMA3_RS11915 0f81bfa0a6efcbdab75243b9945ae085 370 Pfam PF06742 Protein of unknown function (DUF1214) 271 351 7.2E-4 T 13-09-2016 IPR010621 Domain of unknown function DUF1214 PMA3_RS11915 0f81bfa0a6efcbdab75243b9945ae085 370 Pfam PF06742 Protein of unknown function (DUF1214) 94 173 0.0011 T 13-09-2016 IPR010621 Domain of unknown function DUF1214 PMA3_RS16230 5a64ff445f204d9c6153768c9461a3b9 296 PANTHER PTHR30217 1 287 3.5E-97 T 13-09-2016 PMA3_RS16230 5a64ff445f204d9c6153768c9461a3b9 296 Pfam PF01136 Peptidase family U32 85 264 8.7E-12 T 13-09-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS16230 5a64ff445f204d9c6153768c9461a3b9 296 PANTHER PTHR30217:SF8 1 287 3.5E-97 T 13-09-2016 PMA3_RS06695 7430f1132821754600ba105c1aa4131f 334 SUPERFAMILY SSF53822 31 333 2.83E-61 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS06695 7430f1132821754600ba105c1aa4131f 334 PANTHER PTHR30036:SF1 13 332 6.1E-65 T 13-09-2016 PMA3_RS06695 7430f1132821754600ba105c1aa4131f 334 PANTHER PTHR30036 13 332 6.1E-65 T 13-09-2016 PMA3_RS06695 7430f1132821754600ba105c1aa4131f 334 PIRSF PIRSF002816 1 332 6.9E-150 T 13-09-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 PMA3_RS06695 7430f1132821754600ba105c1aa4131f 334 Gene3D G3DSA:3.40.50.2300 154 303 1.1E-39 T 13-09-2016 PMA3_RS06695 7430f1132821754600ba105c1aa4131f 334 Gene3D G3DSA:3.40.50.2300 31 153 3.2E-39 T 13-09-2016 PMA3_RS06695 7430f1132821754600ba105c1aa4131f 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 33 325 3.0E-52 T 13-09-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain PMA3_RS00425 0d5a886d06a2232fddbf90c0bb387b6f 81 PANTHER PTHR33713:SF5 1 71 2.2E-23 T 13-09-2016 PMA3_RS00425 0d5a886d06a2232fddbf90c0bb387b6f 81 PANTHER PTHR33713 1 71 2.2E-23 T 13-09-2016 PMA3_RS00425 0d5a886d06a2232fddbf90c0bb387b6f 81 SUPERFAMILY SSF143120 10 65 1.15E-7 T 13-09-2016 PMA3_RS00425 0d5a886d06a2232fddbf90c0bb387b6f 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 71 4.5E-9 T 13-09-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PMA3_RS11465 738ffd4acf4dac941d86be4f471dd426 443 Pfam PF07690 Major Facilitator Superfamily 21 371 1.3E-27 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS11465 738ffd4acf4dac941d86be4f471dd426 443 PANTHER PTHR23508 7 428 4.5E-140 T 13-09-2016 PMA3_RS11465 738ffd4acf4dac941d86be4f471dd426 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 295 311 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS11465 738ffd4acf4dac941d86be4f471dd426 443 PANTHER PTHR23508:SF17 7 428 4.5E-140 T 13-09-2016 PMA3_RS11465 738ffd4acf4dac941d86be4f471dd426 443 Gene3D G3DSA:1.20.1250.20 14 218 4.2E-23 T 13-09-2016 PMA3_RS11465 738ffd4acf4dac941d86be4f471dd426 443 Gene3D G3DSA:1.20.1250.20 244 423 5.4E-20 T 13-09-2016 PMA3_RS11465 738ffd4acf4dac941d86be4f471dd426 443 SUPERFAMILY SSF103473 13 420 9.16E-69 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 Gene3D G3DSA:1.10.1060.10 5 143 5.0E-33 T 13-09-2016 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 SUPERFAMILY SSF51971 327 448 2.71E-9 T 13-09-2016 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 141 437 5.9E-32 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 372 388 4.8E-20 T 13-09-2016 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 401 423 4.8E-20 T 13-09-2016 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 162 4.8E-20 T 13-09-2016 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 294 4.8E-20 T 13-09-2016 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 SUPERFAMILY SSF51971 139 381 4.65E-49 T 13-09-2016 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 21 126 2.8E-33 T 13-09-2016 IPR028261 Dihydroprymidine dehydrogenase domain II PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 SUPERFAMILY SSF46548 6 151 3.82E-28 T 13-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 PANTHER PTHR11938:SF108 15 413 5.6E-160 T 13-09-2016 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 Gene3D G3DSA:3.40.50.720 382 450 6.3E-26 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 Gene3D G3DSA:3.40.50.720 144 230 6.3E-26 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 Gene3D G3DSA:3.50.50.60 231 381 5.2E-31 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 PANTHER PTHR11938 15 413 5.6E-160 T 13-09-2016 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 374 395 1.5E-11 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 296 1.5E-11 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 411 429 1.5E-11 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS15575 b8353f55c897f98f6a07cc06a7161da2 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 164 1.5E-11 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 SMART SM00382 213 358 5.2E-8 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 Gene3D G3DSA:3.40.50.300 190 366 8.1E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 PANTHER PTHR32071:SF3 1 501 3.0E-190 T 13-09-2016 PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 452 499 4.2E-25 T 13-09-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 13-09-2016 IPR025944 Sigma-54 interaction domain, conserved site PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 SUPERFAMILY SSF55785 79 164 1.75E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 Gene3D G3DSA:1.10.10.60 444 498 4.3E-22 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 Pfam PF00158 Sigma-54 interaction domain 193 360 4.1E-65 T 13-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 SUPERFAMILY SSF46689 447 498 1.67E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 SUPERFAMILY SSF52540 194 435 2.66E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 PANTHER PTHR32071 1 501 3.0E-190 T 13-09-2016 PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 SMART SM00091 79 143 0.0025 T 13-09-2016 IPR000014 PAS domain PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 217 230 - T 13-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 Gene3D G3DSA:1.10.8.60 367 438 2.8E-21 T 13-09-2016 PMA3_RS23170 3257ed6987bb832642513dfb575e54b8 502 Gene3D G3DSA:3.30.450.20 77 164 9.9E-8 T 13-09-2016 PMA3_RS15080 04d57ccc00846c90efde21e485e75e5b 193 Pfam PF14316 Domain of unknown function (DUF4381) 9 93 1.7E-21 T 13-09-2016 IPR025489 Protein of unknown function (DUF4381 PMA3_RS15080 04d57ccc00846c90efde21e485e75e5b 193 Pfam PF14316 Domain of unknown function (DUF4381) 133 188 1.3E-7 T 13-09-2016 IPR025489 Protein of unknown function (DUF4381 PMA3_RS26790 18e493b2d23157d6513c5bc50fe282e4 218 Pfam PF11726 Protein of unknown function (DUF3296) 38 216 2.8E-46 T 13-09-2016 IPR021723 Inovirus Gp2 PMA3_RS10410 2f9195aa39786cd5332b5f210a969210 188 Pfam PF06821 Serine hydrolase 10 182 4.5E-42 T 13-09-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- PMA3_RS10410 2f9195aa39786cd5332b5f210a969210 188 SUPERFAMILY SSF53474 9 184 9.42E-26 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS10410 2f9195aa39786cd5332b5f210a969210 188 Gene3D G3DSA:3.40.50.1820 8 186 1.3E-34 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 PANTHER PTHR23309 1 305 9.5E-175 T 13-09-2016 PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 PANTHER PTHR23309 390 499 9.5E-175 T 13-09-2016 PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 181 4.6E-58 T 13-09-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 SUPERFAMILY SSF51735 1 186 1.77E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 SUPERFAMILY SSF48179 186 290 3.06E-31 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 413 496 1.1E-15 T 13-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 284 1.6E-28 T 13-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 SUPERFAMILY SSF48179 412 496 7.74E-14 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 Gene3D G3DSA:3.40.50.720 2 188 6.5E-54 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 PANTHER PTHR23309:SF12 1 305 9.5E-175 T 13-09-2016 PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 PANTHER PTHR23309:SF12 390 499 9.5E-175 T 13-09-2016 PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 Gene3D G3DSA:1.10.1040.10 189 285 9.6E-29 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS18660 f8b720e6dfbf98b301ef87b57a63a38b 506 Gene3D G3DSA:1.10.1040.10 413 491 5.6E-15 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS20205 b3fc1816510a9d456eb67c8a5741160b 390 PANTHER PTHR23542:SF1 2 390 3.9E-113 T 13-09-2016 PMA3_RS20205 b3fc1816510a9d456eb67c8a5741160b 390 PANTHER PTHR23542 2 390 3.9E-113 T 13-09-2016 PMA3_RS20205 b3fc1816510a9d456eb67c8a5741160b 390 SUPERFAMILY SSF103473 16 384 8.89E-37 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS20205 b3fc1816510a9d456eb67c8a5741160b 390 Pfam PF07690 Major Facilitator Superfamily 18 228 1.8E-15 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS20205 b3fc1816510a9d456eb67c8a5741160b 390 Gene3D G3DSA:1.20.1250.20 210 380 2.0E-19 T 13-09-2016 PMA3_RS20205 b3fc1816510a9d456eb67c8a5741160b 390 Gene3D G3DSA:1.20.1250.20 17 196 1.1E-10 T 13-09-2016 PMA3_RS27015 fc8d5ed975578381cf9d78ea4a4bf547 313 Gene3D G3DSA:3.40.50.720 4 177 8.9E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27015 fc8d5ed975578381cf9d78ea4a4bf547 313 SUPERFAMILY SSF51735 6 308 3.28E-93 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27015 fc8d5ed975578381cf9d78ea4a4bf547 313 PANTHER PTHR10366 5 307 1.9E-98 T 13-09-2016 PMA3_RS27015 fc8d5ed975578381cf9d78ea4a4bf547 313 Gene3D G3DSA:3.90.25.10 178 299 9.3E-33 T 13-09-2016 PMA3_RS27015 fc8d5ed975578381cf9d78ea4a4bf547 313 PANTHER PTHR10366:SF466 5 307 1.9E-98 T 13-09-2016 PMA3_RS27015 fc8d5ed975578381cf9d78ea4a4bf547 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 243 2.0E-64 T 13-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PMA3_RS01590 d41697f3f3e474a27fb3796d95614cd6 408 Gene3D G3DSA:3.40.47.10 1 259 2.0E-59 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS01590 d41697f3f3e474a27fb3796d95614cd6 408 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 363 3.8E-28 T 13-09-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PMA3_RS01590 d41697f3f3e474a27fb3796d95614cd6 408 SUPERFAMILY SSF53901 1 251 4.75E-61 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS01590 d41697f3f3e474a27fb3796d95614cd6 408 Gene3D G3DSA:3.40.47.10 263 407 3.2E-48 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS01590 d41697f3f3e474a27fb3796d95614cd6 408 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 13-09-2016 IPR018201 Beta-ketoacyl synthase, active site PMA3_RS01590 d41697f3f3e474a27fb3796d95614cd6 408 SMART SM00825 Beta-ketoacyl synthase 4 349 6.6E-10 T 13-09-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PMA3_RS01590 d41697f3f3e474a27fb3796d95614cd6 408 PANTHER PTHR11712 1 407 1.0E-112 T 13-09-2016 PMA3_RS01590 d41697f3f3e474a27fb3796d95614cd6 408 SUPERFAMILY SSF53901 214 407 1.21E-59 T 13-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PMA3_RS01590 d41697f3f3e474a27fb3796d95614cd6 408 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 3.2E-46 T 13-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PMA3_RS24105 1bf8200821bb36291188e6fd9bcc0b5e 96 Gene3D G3DSA:3.30.1360.60 31 95 1.6E-13 T 13-09-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PMA3_RS24105 1bf8200821bb36291188e6fd9bcc0b5e 96 SUPERFAMILY SSF55604 32 95 1.01E-10 T 13-09-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PMA3_RS24105 1bf8200821bb36291188e6fd9bcc0b5e 96 Pfam PF00367 phosphotransferase system, EIIB 35 68 1.8E-7 T 13-09-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PMA3_RS29215 e82954b617501b2c553ca7665bd57b9c 183 PANTHER PTHR36570 10 174 5.2E-25 T 13-09-2016 PMA3_RS29215 e82954b617501b2c553ca7665bd57b9c 183 Gene3D G3DSA:1.20.1550.10 3 161 4.9E-31 T 13-09-2016 IPR023380 Disulphide bond formation protein DsbB-like domain PMA3_RS29215 e82954b617501b2c553ca7665bd57b9c 183 SUPERFAMILY SSF158442 10 157 9.29E-30 T 13-09-2016 PMA3_RS29215 e82954b617501b2c553ca7665bd57b9c 183 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 2 165 19.087 T 13-09-2016 IPR022920 Disulphide bond formation protein DsbB PMA3_RS29215 e82954b617501b2c553ca7665bd57b9c 183 Pfam PF02600 Disulfide bond formation protein DsbB 7 156 8.2E-29 T 13-09-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PMA3_RS05570 34aeaf25d60ad64d5b4cde8f299c186d 429 Pfam PF10117 McrBC 5-methylcytosine restriction system component 59 380 2.5E-105 T 13-09-2016 IPR019292 5-methylcytosine restriction system component PMA3_RS05570 34aeaf25d60ad64d5b4cde8f299c186d 429 PANTHER PTHR38733 1 401 1.7E-78 T 13-09-2016 PMA3_RS05570 34aeaf25d60ad64d5b4cde8f299c186d 429 PANTHER PTHR38733:SF1 1 401 1.7E-78 T 13-09-2016 PMA3_RS11715 9b1993feb662575171e0abbb366a7aae 807 PANTHER PTHR33406 129 807 5.4E-79 T 13-09-2016 PMA3_RS11715 9b1993feb662575171e0abbb366a7aae 807 PANTHER PTHR33406 1 105 5.4E-79 T 13-09-2016 PMA3_RS11715 9b1993feb662575171e0abbb366a7aae 807 Gene3D G3DSA:1.20.1640.10 195 387 1.1E-28 T 13-09-2016 PMA3_RS11715 9b1993feb662575171e0abbb366a7aae 807 Gene3D G3DSA:1.20.1640.10 576 780 1.3E-31 T 13-09-2016 PMA3_RS11715 9b1993feb662575171e0abbb366a7aae 807 SUPERFAMILY SSF82866 564 777 2.35E-33 T 13-09-2016 PMA3_RS11715 9b1993feb662575171e0abbb366a7aae 807 SUPERFAMILY SSF82866 170 386 9.94E-28 T 13-09-2016 PMA3_RS11715 9b1993feb662575171e0abbb366a7aae 807 PANTHER PTHR33406:SF2 129 807 5.4E-79 T 13-09-2016 PMA3_RS11715 9b1993feb662575171e0abbb366a7aae 807 PANTHER PTHR33406:SF2 1 105 5.4E-79 T 13-09-2016 PMA3_RS11715 9b1993feb662575171e0abbb366a7aae 807 Pfam PF03176 MMPL family 167 418 1.7E-8 T 13-09-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PMA3_RS11715 9b1993feb662575171e0abbb366a7aae 807 Pfam PF03176 MMPL family 566 785 4.5E-18 T 13-09-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PMA3_RS06040 812e55258846d2c5ad576e86810e659c 351 PANTHER PTHR21716 1 351 2.1E-119 T 13-09-2016 IPR002549 Transmembrane protein TqsA-like PMA3_RS06040 812e55258846d2c5ad576e86810e659c 351 PANTHER PTHR21716:SF20 1 351 2.1E-119 T 13-09-2016 PMA3_RS06040 812e55258846d2c5ad576e86810e659c 351 Pfam PF01594 Domain of unknown function DUF20 9 339 5.7E-44 T 13-09-2016 IPR002549 Transmembrane protein TqsA-like PMA3_RS10000 e0257f936c9f8f6a89e308e355942bfc 322 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 13-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PMA3_RS10000 e0257f936c9f8f6a89e308e355942bfc 322 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 13-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PMA3_RS10000 e0257f936c9f8f6a89e308e355942bfc 322 SUPERFAMILY SSF52283 5 127 9.64E-23 T 13-09-2016 PMA3_RS10000 e0257f936c9f8f6a89e308e355942bfc 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 288 3.2E-47 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS10000 e0257f936c9f8f6a89e308e355942bfc 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 36 313 5.7E-22 T 13-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PMA3_RS10000 e0257f936c9f8f6a89e308e355942bfc 322 Gene3D G3DSA:3.40.50.720 22 113 1.4E-24 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10000 e0257f936c9f8f6a89e308e355942bfc 322 SUPERFAMILY SSF51735 102 289 6.9E-48 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10000 e0257f936c9f8f6a89e308e355942bfc 322 Gene3D G3DSA:3.40.50.720 114 290 3.1E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10000 e0257f936c9f8f6a89e308e355942bfc 322 PANTHER PTHR10996 29 311 3.0E-79 T 13-09-2016 PMA3_RS12165 5a9407421cd8653900646af3d68743fc 80 Pfam PF04325 Protein of unknown function (DUF465) 29 73 6.6E-5 T 13-09-2016 IPR007420 Protein of unknown function DUF465 PMA3_RS04485 b4227e75681e3de6f1d73eb5768203e3 243 ProSitePatterns PS00194 Thioredoxin family active site. 123 141 - T 13-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PMA3_RS04485 b4227e75681e3de6f1d73eb5768203e3 243 Gene3D G3DSA:3.10.450.70 26 88 1.7E-22 T 13-09-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal PMA3_RS04485 b4227e75681e3de6f1d73eb5768203e3 243 SUPERFAMILY SSF52833 108 237 3.1E-33 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS04485 b4227e75681e3de6f1d73eb5768203e3 243 PANTHER PTHR35272:SF3 1 238 7.4E-87 T 13-09-2016 PMA3_RS04485 b4227e75681e3de6f1d73eb5768203e3 243 Gene3D G3DSA:3.40.30.10 117 237 1.4E-42 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS04485 b4227e75681e3de6f1d73eb5768203e3 243 Pfam PF10411 Disulfide bond isomerase protein N-terminus 30 83 1.1E-17 T 13-09-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PMA3_RS04485 b4227e75681e3de6f1d73eb5768203e3 243 SUPERFAMILY SSF54423 26 87 5.36E-13 T 13-09-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PMA3_RS04485 b4227e75681e3de6f1d73eb5768203e3 243 Pfam PF13098 Thioredoxin-like domain 116 238 3.0E-26 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS04485 b4227e75681e3de6f1d73eb5768203e3 243 PANTHER PTHR35272 1 238 7.4E-87 T 13-09-2016 PMA3_RS18570 0579d0cd0ea9c278de0d041546bd62bb 108 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 35 98 1.8E-14 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS18570 0579d0cd0ea9c278de0d041546bd62bb 108 Gene3D G3DSA:1.10.760.10 34 105 1.2E-16 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS18570 0579d0cd0ea9c278de0d041546bd62bb 108 SUPERFAMILY SSF46626 12 105 1.68E-13 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS29125 256d0837b0ab3145df1269017292f48c 226 Gene3D G3DSA:1.10.3720.10 13 216 3.6E-41 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29125 256d0837b0ab3145df1269017292f48c 226 SUPERFAMILY SSF161098 15 214 4.14E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29125 256d0837b0ab3145df1269017292f48c 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 2.3E-15 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS29125 256d0837b0ab3145df1269017292f48c 226 PANTHER PTHR30614 1 223 3.0E-82 T 13-09-2016 PMA3_RS29125 256d0837b0ab3145df1269017292f48c 226 PANTHER PTHR30614:SF18 1 223 3.0E-82 T 13-09-2016 PMA3_RS29125 256d0837b0ab3145df1269017292f48c 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 111 7.4E-30 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 1.0E-4 T 13-09-2016 PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 SUPERFAMILY SSF51735 4 248 3.36E-60 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PANTHER PTHR24322 159 190 1.3E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PANTHER PTHR24322 10 143 1.3E-49 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 Gene3D G3DSA:3.40.50.720 2 250 7.5E-68 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PANTHER PTHR24322:SF356 159 190 1.3E-49 T 13-09-2016 PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PANTHER PTHR24322:SF356 10 143 1.3E-49 T 13-09-2016 PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 8.5E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 8.5E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 8.5E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.9E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.9E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.9E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 4.9E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.9E-28 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14850 3c3363144e6c2acb672b2d0ccfc7be82 253 Pfam PF00106 short chain dehydrogenase 6 200 1.2E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 SMART SM00387 486 598 9.5E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 PANTHER PTHR24423 317 361 2.0E-27 T 13-09-2016 PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 597 2.9E-14 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 2.1E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 595 2.1E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 2.1E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 2.1E-8 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 PANTHER PTHR24423:SF562 317 361 2.0E-27 T 13-09-2016 PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 PANTHER PTHR24423:SF562 411 596 2.0E-27 T 13-09-2016 PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 SUPERFAMILY SSF55874 446 598 4.45E-28 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 PANTHER PTHR24423 411 596 2.0E-27 T 13-09-2016 PMA3_RS23925 1b17e408e49146354ed24e0674d946f3 603 Gene3D G3DSA:3.30.565.10 447 597 2.2E-27 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 35 408 1.8E-110 T 13-09-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 SUPERFAMILY SSF56542 11 127 1.7E-72 T 13-09-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 SUPERFAMILY SSF56542 242 398 1.7E-72 T 13-09-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 Gene3D G3DSA:3.90.770.10 244 408 5.5E-67 T 13-09-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 Gene3D G3DSA:3.90.770.10 74 126 5.5E-67 T 13-09-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 SUPERFAMILY SSF55035 130 244 2.35E-33 T 13-09-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 340 347 - T 13-09-2016 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 ProSitePatterns PS00066 Hydroxymethylglutaryl-coenzyme A reductases signature 1. 187 201 - T 13-09-2016 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 PANTHER PTHR10572 12 408 7.5E-134 T 13-09-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 185 203 6.2E-43 T 13-09-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 328 349 6.2E-43 T 13-09-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 276 302 6.2E-43 T 13-09-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 63 84 6.2E-43 T 13-09-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 225 250 6.2E-43 T 13-09-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS24045 19ccd7c8a189def17b0e5fc41b17ec81 408 Gene3D G3DSA:3.30.70.420 130 243 6.2E-35 T 13-09-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 PMA3_RS07945 49d9dcd2445a80c7b62e6d3fc0022a90 261 Pfam PF01925 Sulfite exporter TauE/SafE 9 259 2.9E-49 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS07945 49d9dcd2445a80c7b62e6d3fc0022a90 261 PANTHER PTHR30269:SF2 1 261 6.3E-59 T 13-09-2016 PMA3_RS07945 49d9dcd2445a80c7b62e6d3fc0022a90 261 PANTHER PTHR30269 1 261 6.3E-59 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS21385 85c37a597eda4c8153727dd723d45d58 332 PANTHER PTHR30368 7 332 8.1E-167 T 13-09-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 PMA3_RS21385 85c37a597eda4c8153727dd723d45d58 332 SUPERFAMILY SSF53850 22 329 3.31E-82 T 13-09-2016 PMA3_RS21385 85c37a597eda4c8153727dd723d45d58 332 Pfam PF13531 Bacterial extracellular solute-binding protein 32 281 3.4E-39 T 13-09-2016 PMA3_RS21385 85c37a597eda4c8153727dd723d45d58 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 17 328 3.4E-132 T 13-09-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 PMA3_RS21385 85c37a597eda4c8153727dd723d45d58 332 Gene3D G3DSA:3.40.190.10 25 169 1.4E-46 T 13-09-2016 PMA3_RS21385 85c37a597eda4c8153727dd723d45d58 332 Gene3D G3DSA:3.40.190.10 192 297 1.1E-24 T 13-09-2016 PMA3_RS21385 85c37a597eda4c8153727dd723d45d58 332 PANTHER PTHR30368:SF2 7 332 8.1E-167 T 13-09-2016 PMA3_RS00255 87c5ee7014ec64e11c99036ebd360f5a 478 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 475 2.9E-185 T 13-09-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PMA3_RS00255 87c5ee7014ec64e11c99036ebd360f5a 478 PIRSF PIRSF000204 1 478 1.9E-213 T 13-09-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PMA3_RS00255 87c5ee7014ec64e11c99036ebd360f5a 478 PANTHER PTHR10160 3 477 7.7E-223 T 13-09-2016 PMA3_RS00255 87c5ee7014ec64e11c99036ebd360f5a 478 PANTHER PTHR10160:SF24 3 477 7.7E-223 T 13-09-2016 PMA3_RS00255 87c5ee7014ec64e11c99036ebd360f5a 478 SUPERFAMILY SSF52467 306 478 4.91E-74 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS00255 87c5ee7014ec64e11c99036ebd360f5a 478 Gene3D G3DSA:3.40.50.1220 304 478 1.1E-85 T 13-09-2016 IPR029035 DHS-like NAD/FAD-binding domain PMA3_RS21950 9d367df0c9d3af4e96b8b5f933dc9bd5 196 SUPERFAMILY SSF109604 6 151 2.27E-29 T 13-09-2016 PMA3_RS21950 9d367df0c9d3af4e96b8b5f933dc9bd5 196 PANTHER PTHR40202 17 191 5.8E-28 T 13-09-2016 PMA3_RS21950 9d367df0c9d3af4e96b8b5f933dc9bd5 196 PANTHER PTHR40202:SF1 17 191 5.8E-28 T 13-09-2016 PMA3_RS22590 925af30eabe1d99e10d70ecbbbc81a26 152 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 10 143 3.9E-19 T 13-09-2016 IPR009936 Protein of unknown function DUF1468 PMA3_RS22920 1b860a3f46d219ee60a802ddd856d17c 162 SUPERFAMILY SSF55729 1 159 9.64E-27 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22920 1b860a3f46d219ee60a802ddd856d17c 162 PANTHER PTHR10908 2 162 1.1E-35 T 13-09-2016 PMA3_RS22920 1b860a3f46d219ee60a802ddd856d17c 162 Pfam PF00583 Acetyltransferase (GNAT) family 50 140 2.2E-11 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS22920 1b860a3f46d219ee60a802ddd856d17c 162 Gene3D G3DSA:3.40.630.30 1 161 5.0E-41 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS09935 ac6243a47257d85122f9d3d1e16a4db9 307 PANTHER PTHR31964:SF26 138 301 1.4E-13 T 13-09-2016 PMA3_RS09935 ac6243a47257d85122f9d3d1e16a4db9 307 Pfam PF00582 Universal stress protein family 177 300 1.7E-18 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS09935 ac6243a47257d85122f9d3d1e16a4db9 307 Pfam PF00582 Universal stress protein family 18 145 3.4E-8 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS09935 ac6243a47257d85122f9d3d1e16a4db9 307 Gene3D G3DSA:3.40.50.620 18 141 1.6E-12 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS09935 ac6243a47257d85122f9d3d1e16a4db9 307 PANTHER PTHR31964 138 301 1.4E-13 T 13-09-2016 PMA3_RS09935 ac6243a47257d85122f9d3d1e16a4db9 307 SUPERFAMILY SSF52402 173 301 2.09E-23 T 13-09-2016 PMA3_RS09935 ac6243a47257d85122f9d3d1e16a4db9 307 Gene3D G3DSA:3.40.50.620 142 301 1.5E-25 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS09935 ac6243a47257d85122f9d3d1e16a4db9 307 PRINTS PR01438 Universal stress protein signature 261 273 1.7E-5 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS09935 ac6243a47257d85122f9d3d1e16a4db9 307 PRINTS PR01438 Universal stress protein signature 278 300 1.7E-5 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS09935 ac6243a47257d85122f9d3d1e16a4db9 307 SUPERFAMILY SSF52402 18 145 1.67E-16 T 13-09-2016 PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 SUPERFAMILY SSF53092 178 290 8.63E-5 T 13-09-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 PANTHER PTHR10804 290 600 7.0E-155 T 13-09-2016 PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 PANTHER PTHR10804 13 188 7.0E-155 T 13-09-2016 PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 SUPERFAMILY SSF55920 317 568 8.9E-55 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 Pfam PF00557 Metallopeptidase family M24 317 531 9.6E-45 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 PANTHER PTHR10804:SF87 290 600 7.0E-155 T 13-09-2016 PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 PANTHER PTHR10804:SF87 13 188 7.0E-155 T 13-09-2016 PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 Pfam PF16189 Creatinase/Prolidase N-terminal domain 156 311 5.9E-38 T 13-09-2016 PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 SUPERFAMILY SSF53092 13 135 8.02E-9 T 13-09-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 Gene3D G3DSA:3.40.350.10 13 137 3.7E-16 T 13-09-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 Gene3D G3DSA:3.40.350.10 179 293 2.2E-10 T 13-09-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 Gene3D G3DSA:3.90.230.10 310 569 2.7E-60 T 13-09-2016 IPR000994 Peptidase M24, structural domain PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 Pfam PF16188 C-terminal region of peptidase_M24 542 602 3.8E-25 T 13-09-2016 IPR032416 Peptidase M24, C-terminal domain PMA3_RS07385 757940e9c4407d5cc6518053059618b0 602 Pfam PF01321 Creatinase/Prolidase N-terminal domain 14 137 7.3E-13 T 13-09-2016 IPR000587 Creatinase, N-terminal GO:0016787 PMA3_RS09740 412dd3fc87e8395c9fb3ae2aa992d7a5 528 Gene3D G3DSA:3.30.1490.20 321 396 1.2E-8 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS09740 412dd3fc87e8395c9fb3ae2aa992d7a5 528 Pfam PF08443 RimK-like ATP-grasp domain 318 495 9.6E-9 T 13-09-2016 IPR013651 ATP-grasp fold, RimK-type PMA3_RS09740 412dd3fc87e8395c9fb3ae2aa992d7a5 528 Gene3D G3DSA:3.30.470.20 128 138 5.0E-5 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS09740 412dd3fc87e8395c9fb3ae2aa992d7a5 528 Gene3D G3DSA:3.30.470.20 397 495 5.0E-5 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS09740 412dd3fc87e8395c9fb3ae2aa992d7a5 528 PANTHER PTHR11609 195 528 2.8E-154 T 13-09-2016 PMA3_RS09740 412dd3fc87e8395c9fb3ae2aa992d7a5 528 PANTHER PTHR11609:SF4 195 528 2.8E-154 T 13-09-2016 PMA3_RS09740 412dd3fc87e8395c9fb3ae2aa992d7a5 528 SUPERFAMILY SSF56059 309 516 8.44E-38 T 13-09-2016 PMA3_RS09740 412dd3fc87e8395c9fb3ae2aa992d7a5 528 Gene3D G3DSA:3.40.50.20 272 320 1.1E-5 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS09740 412dd3fc87e8395c9fb3ae2aa992d7a5 528 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 59 208 4.8E-49 T 13-09-2016 IPR025839 RimK-like ATPgrasp N-terminal domain PMA3_RS25825 c93b54dab0dacb8143d3c01fafcbe018 481 Pfam PF00916 Sulfate permease family 6 353 1.8E-48 T 13-09-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PMA3_RS25825 c93b54dab0dacb8143d3c01fafcbe018 481 PANTHER PTHR11814:SF76 6 477 1.1E-151 T 13-09-2016 PMA3_RS25825 c93b54dab0dacb8143d3c01fafcbe018 481 PANTHER PTHR11814 6 477 1.1E-151 T 13-09-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PMA3_RS25825 c93b54dab0dacb8143d3c01fafcbe018 481 Pfam PF13466 STAS domain 402 477 4.0E-9 T 13-09-2016 IPR002645 STAS domain PMA3_RS25825 c93b54dab0dacb8143d3c01fafcbe018 481 Gene3D G3DSA:3.30.750.24 394 477 9.3E-13 T 13-09-2016 IPR002645 STAS domain PMA3_RS25825 c93b54dab0dacb8143d3c01fafcbe018 481 SUPERFAMILY SSF52091 395 477 3.34E-14 T 13-09-2016 IPR002645 STAS domain PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 PANTHER PTHR24220 8 410 7.1E-191 T 13-09-2016 PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 Pfam PF00005 ABC transporter 27 185 5.5E-28 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 Pfam PF00005 ABC transporter 303 453 2.2E-29 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 SMART SM00382 311 501 3.4E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 SMART SM00382 35 235 6.1E-16 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 PANTHER PTHR24220:SF574 8 410 7.1E-191 T 13-09-2016 PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 504 528 3.0E-5 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 266 4.0E-5 T 13-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 SUPERFAMILY SSF52540 275 524 2.37E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 SUPERFAMILY SSF52540 6 257 2.66E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 Gene3D G3DSA:3.40.50.300 5 259 5.7E-72 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15420 9b1aee50fda79c4326b87f684bef00fe 536 Gene3D G3DSA:3.40.50.300 274 527 9.7E-76 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20155 8f70b3e3e64e773a304147cef3d2cdfb 549 SMART SM00382 365 541 9.8E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS20155 8f70b3e3e64e773a304147cef3d2cdfb 549 PANTHER PTHR24220 337 546 5.7E-104 T 13-09-2016 PMA3_RS20155 8f70b3e3e64e773a304147cef3d2cdfb 549 SUPERFAMILY SSF52540 335 548 3.04E-42 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20155 8f70b3e3e64e773a304147cef3d2cdfb 549 Gene3D G3DSA:3.40.50.300 336 548 5.8E-39 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20155 8f70b3e3e64e773a304147cef3d2cdfb 549 Gene3D G3DSA:1.20.1560.10 12 312 1.9E-27 T 13-09-2016 PMA3_RS20155 8f70b3e3e64e773a304147cef3d2cdfb 549 Pfam PF00005 ABC transporter 358 492 2.2E-27 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS20155 8f70b3e3e64e773a304147cef3d2cdfb 549 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 6 547 1.3E-244 T 13-09-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 PMA3_RS20155 8f70b3e3e64e773a304147cef3d2cdfb 549 SUPERFAMILY SSF90123 12 313 1.44E-33 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS20155 8f70b3e3e64e773a304147cef3d2cdfb 549 PANTHER PTHR24220:SF425 337 546 5.7E-104 T 13-09-2016 PMA3_RS20155 8f70b3e3e64e773a304147cef3d2cdfb 549 Pfam PF00664 ABC transporter transmembrane region 28 209 1.8E-11 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS13080 32325380c802536804fcec2bd0266390 341 Pfam PF00561 alpha/beta hydrolase fold 71 322 3.3E-22 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS13080 32325380c802536804fcec2bd0266390 341 PRINTS PR00412 Epoxide hydrolase signature 311 333 1.9E-8 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS13080 32325380c802536804fcec2bd0266390 341 PRINTS PR00412 Epoxide hydrolase signature 141 154 1.9E-8 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS13080 32325380c802536804fcec2bd0266390 341 PRINTS PR00412 Epoxide hydrolase signature 96 111 1.9E-8 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS13080 32325380c802536804fcec2bd0266390 341 PRINTS PR00412 Epoxide hydrolase signature 155 168 1.9E-8 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS13080 32325380c802536804fcec2bd0266390 341 Gene3D G3DSA:3.40.50.1820 33 335 8.7E-80 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13080 32325380c802536804fcec2bd0266390 341 PANTHER PTHR10992 1 336 2.4E-82 T 13-09-2016 PMA3_RS13080 32325380c802536804fcec2bd0266390 341 SUPERFAMILY SSF53474 52 336 3.3E-61 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13080 32325380c802536804fcec2bd0266390 341 PANTHER PTHR10992:SF771 1 336 2.4E-82 T 13-09-2016 PMA3_RS13080 32325380c802536804fcec2bd0266390 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 155 168 2.1E-10 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS13080 32325380c802536804fcec2bd0266390 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 111 2.1E-10 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS13080 32325380c802536804fcec2bd0266390 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 141 154 2.1E-10 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS16800 1b8ff082b37d4c65e5c8b362ae156c00 200 Pfam PF07081 Protein of unknown function (DUF1349) 11 190 9.6E-57 T 13-09-2016 IPR009784 Protein of unknown function DUF1349 PMA3_RS16800 1b8ff082b37d4c65e5c8b362ae156c00 200 SUPERFAMILY SSF49899 4 190 5.14E-33 T 13-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PMA3_RS16800 1b8ff082b37d4c65e5c8b362ae156c00 200 PANTHER PTHR35332 5 198 1.4E-49 T 13-09-2016 PMA3_RS16800 1b8ff082b37d4c65e5c8b362ae156c00 200 Gene3D G3DSA:2.60.120.200 4 190 1.8E-31 T 13-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PMA3_RS16800 1b8ff082b37d4c65e5c8b362ae156c00 200 PANTHER PTHR35332:SF2 5 198 1.4E-49 T 13-09-2016 PMA3_RS16800 1b8ff082b37d4c65e5c8b362ae156c00 200 PIRSF PIRSF022704 1 199 1.7E-72 T 13-09-2016 IPR015987 Uncharacterised conserved protein UCP022704 PMA3_RS25295 964a84715aa9ba77a969514d80583063 541 PIRSF PIRSF002741 12 540 1.3E-110 T 13-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PMA3_RS25295 964a84715aa9ba77a969514d80583063 541 PANTHER PTHR30290:SF14 22 541 3.7E-199 T 13-09-2016 PMA3_RS25295 964a84715aa9ba77a969514d80583063 541 Gene3D G3DSA:3.10.105.10 292 510 3.0E-64 T 13-09-2016 PMA3_RS25295 964a84715aa9ba77a969514d80583063 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 457 3.2E-93 T 13-09-2016 IPR000914 Solute-binding protein family 5 domain PMA3_RS25295 964a84715aa9ba77a969514d80583063 541 PANTHER PTHR30290 22 541 3.7E-199 T 13-09-2016 PMA3_RS25295 964a84715aa9ba77a969514d80583063 541 Gene3D G3DSA:3.90.76.10 36 216 4.1E-46 T 13-09-2016 PMA3_RS25295 964a84715aa9ba77a969514d80583063 541 SUPERFAMILY SSF53850 28 538 6.63E-141 T 13-09-2016 PMA3_RS25295 964a84715aa9ba77a969514d80583063 541 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 13-09-2016 IPR023765 Solute-binding protein family 5, conserved site PMA3_RS09190 18c5847a33cb2692d9f801e53054f96d 427 PANTHER PTHR13847 1 425 3.7E-246 T 13-09-2016 PMA3_RS09190 18c5847a33cb2692d9f801e53054f96d 427 PANTHER PTHR13847:SF210 1 425 3.7E-246 T 13-09-2016 PMA3_RS09190 18c5847a33cb2692d9f801e53054f96d 427 SUPERFAMILY SSF51905 345 413 1.55E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09190 18c5847a33cb2692d9f801e53054f96d 427 SUPERFAMILY SSF51905 30 253 1.55E-42 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09190 18c5847a33cb2692d9f801e53054f96d 427 Pfam PF01266 FAD dependent oxidoreductase 31 381 1.4E-51 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS09190 18c5847a33cb2692d9f801e53054f96d 427 Gene3D G3DSA:3.50.50.60 173 252 8.9E-48 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09190 18c5847a33cb2692d9f801e53054f96d 427 Gene3D G3DSA:3.50.50.60 345 399 8.9E-48 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09190 18c5847a33cb2692d9f801e53054f96d 427 Gene3D G3DSA:3.50.50.60 18 120 8.9E-48 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS03330 21745ee2a5d7f5c944710e847ba88580 133 Pfam PF13202 EF hand 69 84 0.13 T 13-09-2016 IPR002048 EF-hand domain GO:0005509 PMA3_RS03330 21745ee2a5d7f5c944710e847ba88580 133 Pfam PF13202 EF hand 89 105 1.7E-4 T 13-09-2016 IPR002048 EF-hand domain GO:0005509 PMA3_RS03330 21745ee2a5d7f5c944710e847ba88580 133 SUPERFAMILY SSF47473 63 125 7.23E-8 T 13-09-2016 IPR011992 EF-hand domain pair PMA3_RS03330 21745ee2a5d7f5c944710e847ba88580 133 Gene3D G3DSA:1.10.238.10 65 129 5.6E-8 T 13-09-2016 IPR011992 EF-hand domain pair PMA3_RS03330 21745ee2a5d7f5c944710e847ba88580 133 ProSitePatterns PS00018 EF-hand calcium-binding domain. 69 81 - T 13-09-2016 IPR018247 EF-Hand 1, calcium-binding site PMA3_RS19890 d704a61132acdde1c6302fc3902d6190 236 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 222 7.2E-11 T 13-09-2016 IPR004046 Glutathione S-transferase, C-terminal PMA3_RS19890 d704a61132acdde1c6302fc3902d6190 236 SUPERFAMILY SSF47616 102 233 5.43E-31 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS19890 d704a61132acdde1c6302fc3902d6190 236 SUPERFAMILY SSF52833 13 102 7.63E-22 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS19890 d704a61132acdde1c6302fc3902d6190 236 PANTHER PTHR11260 21 236 4.9E-70 T 13-09-2016 PMA3_RS19890 d704a61132acdde1c6302fc3902d6190 236 PANTHER PTHR11260:SF178 21 236 4.9E-70 T 13-09-2016 PMA3_RS19890 d704a61132acdde1c6302fc3902d6190 236 Gene3D G3DSA:1.20.1050.10 102 225 4.9E-38 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS19890 d704a61132acdde1c6302fc3902d6190 236 Gene3D G3DSA:3.40.30.10 12 101 3.2E-26 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS19890 d704a61132acdde1c6302fc3902d6190 236 Pfam PF02798 Glutathione S-transferase, N-terminal domain 22 98 7.5E-12 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS21855 36f28c733fbde356d3da0e4773061ab3 98 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 97 2.6E-32 T 13-09-2016 IPR031451 mRNA interferase MqsR GO:0009372|GO:0017148|GO:0042710 PMA3_RS12900 236219e59efbeec40ba2b9c34715bef4 500 PANTHER PTHR11063 63 354 6.8E-24 T 13-09-2016 PMA3_RS12900 236219e59efbeec40ba2b9c34715bef4 500 PANTHER PTHR11063 376 453 6.8E-24 T 13-09-2016 PMA3_RS12900 236219e59efbeec40ba2b9c34715bef4 500 PANTHER PTHR11063:SF8 63 354 6.8E-24 T 13-09-2016 PMA3_RS12900 236219e59efbeec40ba2b9c34715bef4 500 PANTHER PTHR11063:SF8 376 453 6.8E-24 T 13-09-2016 PMA3_RS12900 236219e59efbeec40ba2b9c34715bef4 500 Gene3D G3DSA:3.40.605.10 54 289 3.2E-42 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS12900 236219e59efbeec40ba2b9c34715bef4 500 Gene3D G3DSA:3.40.309.10 290 334 4.0E-8 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS12900 236219e59efbeec40ba2b9c34715bef4 500 Gene3D G3DSA:3.40.309.10 368 444 4.0E-8 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS12900 236219e59efbeec40ba2b9c34715bef4 500 Pfam PF00171 Aldehyde dehydrogenase family 50 333 7.3E-12 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS12900 236219e59efbeec40ba2b9c34715bef4 500 SUPERFAMILY SSF53720 56 447 4.71E-43 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS17175 48952fe667f189212531c09ba5bca032 323 PIRSF PIRSF017082 2 323 4.0E-90 T 13-09-2016 IPR005064 Bordetella uptake gene GO:0030288 PMA3_RS17175 48952fe667f189212531c09ba5bca032 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 319 1.7E-26 T 13-09-2016 IPR005064 Bordetella uptake gene GO:0030288 PMA3_RS17175 48952fe667f189212531c09ba5bca032 323 PANTHER PTHR30349:SF25 22 318 2.6E-78 T 13-09-2016 PMA3_RS17175 48952fe667f189212531c09ba5bca032 323 Gene3D G3DSA:3.40.190.10 123 259 1.6E-5 T 13-09-2016 PMA3_RS17175 48952fe667f189212531c09ba5bca032 323 SUPERFAMILY SSF53850 29 275 8.42E-12 T 13-09-2016 PMA3_RS17175 48952fe667f189212531c09ba5bca032 323 PANTHER PTHR30349 22 318 2.6E-78 T 13-09-2016 PMA3_RS27220 ced520385e2629fb2571ce1ea1b6eee8 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 84 26.173 T 13-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27220 ced520385e2629fb2571ce1ea1b6eee8 88 PANTHER PTHR10744 9 87 6.0E-42 T 13-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27220 ced520385e2629fb2571ce1ea1b6eee8 88 Gene3D G3DSA:2.40.50.140 9 85 1.5E-35 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS27220 ced520385e2629fb2571ce1ea1b6eee8 88 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 1.9E-13 T 13-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27220 ced520385e2629fb2571ce1ea1b6eee8 88 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 1.9E-13 T 13-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27220 ced520385e2629fb2571ce1ea1b6eee8 88 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 1.9E-13 T 13-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27220 ced520385e2629fb2571ce1ea1b6eee8 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 2.0E-35 T 13-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27220 ced520385e2629fb2571ce1ea1b6eee8 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 2.9E-37 T 13-09-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27220 ced520385e2629fb2571ce1ea1b6eee8 88 SUPERFAMILY SSF50249 9 85 2.06E-32 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS27220 ced520385e2629fb2571ce1ea1b6eee8 88 Pfam PF00366 Ribosomal protein S17 13 79 2.4E-33 T 13-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS24260 0f5e4deee8695d3d8816b22de4a963c6 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 9.3E-35 T 13-09-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 PMA3_RS24260 0f5e4deee8695d3d8816b22de4a963c6 107 PANTHER PTHR10072 1 107 4.1E-49 T 13-09-2016 PMA3_RS24260 0f5e4deee8695d3d8816b22de4a963c6 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.8E-23 T 13-09-2016 IPR000361 FeS cluster biogenesis PMA3_RS24260 0f5e4deee8695d3d8816b22de4a963c6 107 SUPERFAMILY SSF89360 1 96 9.55E-31 T 13-09-2016 IPR000361 FeS cluster biogenesis PMA3_RS24260 0f5e4deee8695d3d8816b22de4a963c6 107 Gene3D G3DSA:2.60.300.12 2 96 5.2E-33 T 13-09-2016 IPR000361 FeS cluster biogenesis PMA3_RS24260 0f5e4deee8695d3d8816b22de4a963c6 107 PANTHER PTHR10072:SF48 1 107 4.1E-49 T 13-09-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 PMA3_RS24260 0f5e4deee8695d3d8816b22de4a963c6 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.0E-52 T 13-09-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 PMA3_RS24260 0f5e4deee8695d3d8816b22de4a963c6 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 13-09-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site PMA3_RS29875 c7e91be37dbea6b187c873998c08f90b 290 SUPERFAMILY SSF53613 4 282 4.68E-67 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS29875 c7e91be37dbea6b187c873998c08f90b 290 PANTHER PTHR10534 1 288 1.3E-119 T 13-09-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS29875 c7e91be37dbea6b187c873998c08f90b 290 PANTHER PTHR10534:SF0 1 288 1.3E-119 T 13-09-2016 PMA3_RS29875 c7e91be37dbea6b187c873998c08f90b 290 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 4 288 53.474 T 13-09-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS29875 c7e91be37dbea6b187c873998c08f90b 290 Pfam PF08543 Phosphomethylpyrimidine kinase 70 257 1.4E-11 T 13-09-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 PMA3_RS29875 c7e91be37dbea6b187c873998c08f90b 290 Gene3D G3DSA:3.40.1190.20 3 285 2.9E-84 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS29875 c7e91be37dbea6b187c873998c08f90b 290 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 6 286 2.0E-110 T 13-09-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS20680 133d975f750f111acc629fd20a5facce 229 PANTHER PTHR11941:SF50 1 228 8.1E-129 T 13-09-2016 PMA3_RS20680 133d975f750f111acc629fd20a5facce 229 Gene3D G3DSA:3.90.226.10 2 221 5.9E-35 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS20680 133d975f750f111acc629fd20a5facce 229 PANTHER PTHR11941 1 228 8.1E-129 T 13-09-2016 PMA3_RS20680 133d975f750f111acc629fd20a5facce 229 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 226 3.8E-30 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS20680 133d975f750f111acc629fd20a5facce 229 SUPERFAMILY SSF52096 3 226 6.32E-45 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07170 3a7c4db4d5c0e3d46b61591f8190404a 73 Gene3D G3DSA:2.30.30.100 21 73 3.9E-22 T 13-09-2016 PMA3_RS07170 3a7c4db4d5c0e3d46b61591f8190404a 73 PANTHER PTHR37011 2 73 8.1E-31 T 13-09-2016 PMA3_RS07170 3a7c4db4d5c0e3d46b61591f8190404a 73 PANTHER PTHR37011:SF1 2 73 8.1E-31 T 13-09-2016 PMA3_RS07170 3a7c4db4d5c0e3d46b61591f8190404a 73 SUPERFAMILY SSF50182 22 72 5.45E-16 T 13-09-2016 IPR010920 LSM domain PMA3_RS07170 3a7c4db4d5c0e3d46b61591f8190404a 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 1.2E-21 T 13-09-2016 IPR010305 Protein of unknown function DUF903 PMA3_RS00385 53c0efb77c6137e0a1fad7e9e17bb3a4 298 Gene3D G3DSA:3.60.130.10 16 298 3.9E-90 T 13-09-2016 PMA3_RS00385 53c0efb77c6137e0a1fad7e9e17bb3a4 298 PANTHER PTHR30468 18 298 1.7E-162 T 13-09-2016 PMA3_RS00385 53c0efb77c6137e0a1fad7e9e17bb3a4 298 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 19 291 7.3E-66 T 13-09-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PMA3_RS00385 53c0efb77c6137e0a1fad7e9e17bb3a4 298 PANTHER PTHR30468:SF18 18 298 1.7E-162 T 13-09-2016 PMA3_RS00385 53c0efb77c6137e0a1fad7e9e17bb3a4 298 SUPERFAMILY SSF51197 18 298 6.87E-88 T 13-09-2016 PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 Gene3D G3DSA:1.10.10.10 1 86 2.2E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 Pfam PF03466 LysR substrate binding domain 87 290 3.0E-34 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 Gene3D G3DSA:3.40.190.10 191 260 1.0E-11 T 13-09-2016 PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 PANTHER PTHR30293 1 291 2.1E-61 T 13-09-2016 PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 Gene3D G3DSA:3.40.190.10 88 190 2.9E-23 T 13-09-2016 PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.2E-20 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 PANTHER PTHR30293:SF0 1 291 2.1E-61 T 13-09-2016 PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 SUPERFAMILY SSF53850 89 292 1.19E-31 T 13-09-2016 PMA3_RS19005 a7fe648f8bfc497730a58c7943a2fd8c 294 SUPERFAMILY SSF46785 1 87 5.21E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08195 62af5f6e8f7f63966165b74682bd4a18 275 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 8 260 3.2E-114 T 13-09-2016 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 PMA3_RS08195 62af5f6e8f7f63966165b74682bd4a18 275 PANTHER PTHR18901 1 273 1.4E-116 T 13-09-2016 PMA3_RS08195 62af5f6e8f7f63966165b74682bd4a18 275 Pfam PF13419 Haloacid dehalogenase-like hydrolase 29 206 2.2E-8 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS08195 62af5f6e8f7f63966165b74682bd4a18 275 Gene3D G3DSA:1.10.150.240 28 104 8.9E-36 T 13-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PMA3_RS08195 62af5f6e8f7f63966165b74682bd4a18 275 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 275 139.687 T 13-09-2016 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 PMA3_RS08195 62af5f6e8f7f63966165b74682bd4a18 275 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 77 206 3.7E-13 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS08195 62af5f6e8f7f63966165b74682bd4a18 275 SUPERFAMILY SSF56784 9 262 1.12E-54 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS08195 62af5f6e8f7f63966165b74682bd4a18 275 Gene3D G3DSA:3.40.50.1000 8 27 9.2E-32 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS08195 62af5f6e8f7f63966165b74682bd4a18 275 Gene3D G3DSA:3.40.50.1000 107 260 9.2E-32 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS08195 62af5f6e8f7f63966165b74682bd4a18 275 PANTHER PTHR18901:SF45 1 273 1.4E-116 T 13-09-2016 PMA3_RS25950 aa7f378b35caa87a61624828ed053344 193 PANTHER PTHR16301 3 192 3.2E-56 T 13-09-2016 IPR023582 Impact family PMA3_RS25950 aa7f378b35caa87a61624828ed053344 193 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 1.3E-27 T 13-09-2016 IPR001498 Impact, N-terminal PMA3_RS25950 aa7f378b35caa87a61624828ed053344 193 Gene3D G3DSA:3.30.70.240 127 192 2.5E-17 T 13-09-2016 IPR000640 Translation elongation factor EFG, V domain PMA3_RS25950 aa7f378b35caa87a61624828ed053344 193 SUPERFAMILY SSF54211 5 122 8.34E-38 T 13-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PMA3_RS25950 aa7f378b35caa87a61624828ed053344 193 Pfam PF09186 Domain of unknown function (DUF1949) 132 188 1.1E-12 T 13-09-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal PMA3_RS25950 aa7f378b35caa87a61624828ed053344 193 Gene3D G3DSA:3.30.230.30 4 123 2.2E-43 T 13-09-2016 IPR001498 Impact, N-terminal PMA3_RS25950 aa7f378b35caa87a61624828ed053344 193 SUPERFAMILY SSF54980 128 192 1.22E-11 T 13-09-2016 IPR009022 Elongation factor G, III-V domain PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 SUPERFAMILY SSF46785 7 85 1.84E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 Gene3D G3DSA:1.10.10.10 6 86 3.2E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 SUPERFAMILY SSF53850 96 295 7.45E-36 T 13-09-2016 PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 2.9E-20 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 Gene3D G3DSA:3.40.190.10 97 182 4.9E-24 T 13-09-2016 PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 Pfam PF03466 LysR substrate binding domain 95 293 3.9E-34 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 PANTHER PTHR30537 2 294 6.4E-83 T 13-09-2016 PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 Gene3D G3DSA:3.40.190.10 183 264 4.3E-26 T 13-09-2016 PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 PANTHER PTHR30537:SF26 2 294 6.4E-83 T 13-09-2016 PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.9E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.9E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14120 0c86aea8922ded573374dcca6e2f6ed6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.9E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09340 36f257c26a7b22e7fbe4dd9b55746656 106 PANTHER PTHR39600 32 106 8.7E-12 T 13-09-2016 PMA3_RS09340 36f257c26a7b22e7fbe4dd9b55746656 106 Pfam PF11720 Peptidase inhibitor I78 family 42 106 1.6E-10 T 13-09-2016 IPR021719 Proteinase inhibitor I78 PMA3_RS29260 8012573343593eb343ec3c63342caa45 81 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 9.0E-40 T 13-09-2016 IPR013468 Conserved hypothetical protein CHP02647 PMA3_RS29260 8012573343593eb343ec3c63342caa45 81 Pfam PF06146 Phosphate-starvation-inducible E 7 67 1.5E-12 T 13-09-2016 IPR020948 Phosphate-starvation-induced PsiE-like PMA3_RS17775 e868a34001b443929dcdf067b2348a81 137 Gene3D G3DSA:3.10.180.10 7 135 1.8E-45 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS17775 e868a34001b443929dcdf067b2348a81 137 PANTHER PTHR33990 1 135 3.6E-48 T 13-09-2016 PMA3_RS17775 e868a34001b443929dcdf067b2348a81 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 131 2.4E-12 T 13-09-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase PMA3_RS17775 e868a34001b443929dcdf067b2348a81 137 PANTHER PTHR33990:SF1 1 135 3.6E-48 T 13-09-2016 PMA3_RS17775 e868a34001b443929dcdf067b2348a81 137 SUPERFAMILY SSF54593 1 134 2.22E-39 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS23680 e6cbfca826681a052f491a83a8fb7ea4 158 PANTHER PTHR35335:SF1 1 157 4.7E-34 T 13-09-2016 PMA3_RS23680 e6cbfca826681a052f491a83a8fb7ea4 158 Pfam PF04186 FxsA cytoplasmic membrane protein 6 113 1.0E-31 T 13-09-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 PMA3_RS23680 e6cbfca826681a052f491a83a8fb7ea4 158 PANTHER PTHR35335 1 157 4.7E-34 T 13-09-2016 PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 29 331 1.6E-149 T 13-09-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 Gene3D G3DSA:1.10.8.60 188 260 4.6E-33 T 13-09-2016 PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.5E-33 T 13-09-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 SMART SM00382 56 183 1.8E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 SUPERFAMILY SSF46785 262 335 3.22E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 Gene3D G3DSA:3.40.50.300 25 180 6.1E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 PANTHER PTHR13779:SF25 15 338 3.3E-187 T 13-09-2016 PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 SUPERFAMILY SSF52540 25 256 3.15E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 338 6.0E-40 T 13-09-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 Gene3D G3DSA:1.10.10.10 262 333 7.0E-35 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 7.6E-116 T 13-09-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 PANTHER PTHR13779 15 338 3.3E-187 T 13-09-2016 PMA3_RS23260 2b840148b66926a195e7506075d1296e 353 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 353 182.162 T 13-09-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PMA3_RS16815 a29b5ddc0e50cc1089cabb0b88cbe21f 334 PANTHER PTHR32332 8 277 1.2E-73 T 13-09-2016 PMA3_RS16815 a29b5ddc0e50cc1089cabb0b88cbe21f 334 SUPERFAMILY SSF51412 13 306 4.12E-52 T 13-09-2016 PMA3_RS16815 a29b5ddc0e50cc1089cabb0b88cbe21f 334 Gene3D G3DSA:3.20.20.70 13 302 8.8E-58 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS16815 a29b5ddc0e50cc1089cabb0b88cbe21f 334 Pfam PF03060 Nitronate monooxygenase 13 79 9.0E-14 T 13-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PMA3_RS16815 a29b5ddc0e50cc1089cabb0b88cbe21f 334 Pfam PF03060 Nitronate monooxygenase 88 255 4.7E-37 T 13-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PMA3_RS27155 478cbc71a9c308e30b739d8344fa480d 129 PIRSF PIRSF002131 1 129 1.1E-53 T 13-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27155 478cbc71a9c308e30b739d8344fa480d 129 Gene3D G3DSA:3.30.420.80 9 129 8.2E-54 T 13-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27155 478cbc71a9c308e30b739d8344fa480d 129 SUPERFAMILY SSF53137 15 129 2.42E-47 T 13-09-2016 PMA3_RS27155 478cbc71a9c308e30b739d8344fa480d 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.1E-55 T 13-09-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27155 478cbc71a9c308e30b739d8344fa480d 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 13-09-2016 IPR018102 Ribosomal S11, conserved site PMA3_RS27155 478cbc71a9c308e30b739d8344fa480d 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.632 T 13-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27155 478cbc71a9c308e30b739d8344fa480d 129 PANTHER PTHR11759 11 129 1.1E-71 T 13-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27155 478cbc71a9c308e30b739d8344fa480d 129 Pfam PF00411 Ribosomal protein S11 19 128 6.9E-51 T 13-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PMA3_RS28325 24ce6d8e1cf6551b39106345cf2ca8ed 304 SUPERFAMILY SSF46785 7 82 1.9E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28325 24ce6d8e1cf6551b39106345cf2ca8ed 304 SUPERFAMILY SSF53850 97 295 2.44E-29 T 13-09-2016 PMA3_RS28325 24ce6d8e1cf6551b39106345cf2ca8ed 304 Gene3D G3DSA:3.40.190.10 183 267 2.2E-25 T 13-09-2016 PMA3_RS28325 24ce6d8e1cf6551b39106345cf2ca8ed 304 Gene3D G3DSA:1.10.10.10 7 81 4.9E-15 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28325 24ce6d8e1cf6551b39106345cf2ca8ed 304 Gene3D G3DSA:3.40.190.10 98 182 7.0E-10 T 13-09-2016 PMA3_RS28325 24ce6d8e1cf6551b39106345cf2ca8ed 304 PANTHER PTHR30346 5 297 8.6E-81 T 13-09-2016 PMA3_RS28325 24ce6d8e1cf6551b39106345cf2ca8ed 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 4.2E-12 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS28325 24ce6d8e1cf6551b39106345cf2ca8ed 304 PANTHER PTHR30346:SF0 5 297 8.6E-81 T 13-09-2016 PMA3_RS28325 24ce6d8e1cf6551b39106345cf2ca8ed 304 Pfam PF03466 LysR substrate binding domain 96 297 1.6E-34 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 SUPERFAMILY SSF51735 5 159 2.94E-39 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 SUPERFAMILY SSF48179 161 269 1.65E-33 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 Gene3D G3DSA:1.10.3730.10 161 266 8.0E-36 T 13-09-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 PANTHER PTHR11645:SF0 1 272 3.1E-113 T 13-09-2016 PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 7.4E-35 T 13-09-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 4.2E-23 T 13-09-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 13-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 PIRSF PIRSF000193 3 269 2.6E-81 T 13-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 Gene3D G3DSA:3.40.50.720 2 158 2.9E-49 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 266 4.1E-78 T 13-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 PANTHER PTHR11645 1 272 3.1E-113 T 13-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PMA3_RS28480 66402e16464a7377ac9aea7d9fef6275 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 266 27.304 T 13-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PMA3_RS14755 5860fd5a6e836eee4b8f1b89f4986029 532 PANTHER PTHR30193:SF3 16 274 3.9E-78 T 13-09-2016 PMA3_RS14755 5860fd5a6e836eee4b8f1b89f4986029 532 SUPERFAMILY SSF161098 31 258 2.49E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14755 5860fd5a6e836eee4b8f1b89f4986029 532 Gene3D G3DSA:1.10.3720.10 32 259 2.9E-37 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14755 5860fd5a6e836eee4b8f1b89f4986029 532 Gene3D G3DSA:1.10.3720.10 320 529 1.7E-28 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14755 5860fd5a6e836eee4b8f1b89f4986029 532 PANTHER PTHR30193 16 274 3.9E-78 T 13-09-2016 PMA3_RS14755 5860fd5a6e836eee4b8f1b89f4986029 532 SUPERFAMILY SSF161098 292 524 1.83E-34 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14755 5860fd5a6e836eee4b8f1b89f4986029 532 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 351 529 2.4E-19 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS14755 5860fd5a6e836eee4b8f1b89f4986029 532 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 255 1.7E-8 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS11565 68f108b27dbf1e8f2121350eea7ff5f3 327 PANTHER PTHR30466:SF2 9 158 1.3E-36 T 13-09-2016 PMA3_RS11565 68f108b27dbf1e8f2121350eea7ff5f3 327 Gene3D G3DSA:1.10.10.10 177 313 3.0E-7 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11565 68f108b27dbf1e8f2121350eea7ff5f3 327 SUPERFAMILY SSF50475 8 158 1.08E-45 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS11565 68f108b27dbf1e8f2121350eea7ff5f3 327 Gene3D G3DSA:2.30.110.10 5 158 2.6E-54 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS11565 68f108b27dbf1e8f2121350eea7ff5f3 327 SMART SM00903 17 160 2.2E-54 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS11565 68f108b27dbf1e8f2121350eea7ff5f3 327 SUPERFAMILY SSF46785 176 313 2.83E-8 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS11565 68f108b27dbf1e8f2121350eea7ff5f3 327 PANTHER PTHR30466 9 158 1.3E-36 T 13-09-2016 PMA3_RS11565 68f108b27dbf1e8f2121350eea7ff5f3 327 Pfam PF01613 Flavin reductase like domain 18 159 1.5E-33 T 13-09-2016 IPR002563 Flavin reductase like domain GO:0010181 PMA3_RS03965 298177ccf91a874d93a1ffd822192b73 632 Gene3D G3DSA:1.10.510.10 254 406 3.0E-14 T 13-09-2016 PMA3_RS03965 298177ccf91a874d93a1ffd822192b73 632 Pfam PF00069 Protein kinase domain 260 406 2.9E-8 T 13-09-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PMA3_RS03965 298177ccf91a874d93a1ffd822192b73 632 SUPERFAMILY SSF56112 188 404 4.99E-20 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS18990 87588ab2c138e448bb2ace8f6ceff23f 244 Gene3D G3DSA:3.40.50.10320 5 242 2.1E-48 T 13-09-2016 IPR024078 Putative deacetylase LmbE-like domain PMA3_RS18990 87588ab2c138e448bb2ace8f6ceff23f 244 PANTHER PTHR12993:SF11 5 229 3.5E-52 T 13-09-2016 PMA3_RS18990 87588ab2c138e448bb2ace8f6ceff23f 244 PANTHER PTHR12993 5 229 3.5E-52 T 13-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PMA3_RS18990 87588ab2c138e448bb2ace8f6ceff23f 244 SUPERFAMILY SSF102588 5 243 4.19E-50 T 13-09-2016 IPR024078 Putative deacetylase LmbE-like domain PMA3_RS18990 87588ab2c138e448bb2ace8f6ceff23f 244 Pfam PF02585 GlcNAc-PI de-N-acetylase 9 137 7.2E-21 T 13-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PMA3_RS21630 8a27b007a524ae92f1d919fdac9cf7df 234 SMART SM01321 9 125 5.5E-43 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS21630 8a27b007a524ae92f1d919fdac9cf7df 234 Pfam PF01797 Transposase IS200 like 11 123 3.4E-15 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS21630 8a27b007a524ae92f1d919fdac9cf7df 234 Gene3D G3DSA:3.30.70.1290 8 128 2.9E-16 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS21630 8a27b007a524ae92f1d919fdac9cf7df 234 PANTHER PTHR34322 2 229 3.6E-38 T 13-09-2016 PMA3_RS21630 8a27b007a524ae92f1d919fdac9cf7df 234 PANTHER PTHR34322:SF1 2 229 3.6E-38 T 13-09-2016 PMA3_RS21630 8a27b007a524ae92f1d919fdac9cf7df 234 SUPERFAMILY SSF143422 3 128 3.01E-31 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS26715 6341f9be63c8d88c8cdafa85a1e9c2e1 153 Gene3D G3DSA:3.40.630.30 1 146 1.2E-25 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS26715 6341f9be63c8d88c8cdafa85a1e9c2e1 153 Pfam PF13673 Acetyltransferase (GNAT) domain 47 141 1.9E-8 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS26715 6341f9be63c8d88c8cdafa85a1e9c2e1 153 PANTHER PTHR23091 1 153 1.6E-16 T 13-09-2016 PMA3_RS26715 6341f9be63c8d88c8cdafa85a1e9c2e1 153 SUPERFAMILY SSF55729 1 147 8.92E-33 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS11325 ba1ce6b1d1bad355e5dff461fdf616c9 610 PANTHER PTHR35370:SF1 3 610 1.0E-154 T 13-09-2016 PMA3_RS11325 ba1ce6b1d1bad355e5dff461fdf616c9 610 PIRSF PIRSF028304 1 610 6.2E-188 T 13-09-2016 IPR010272 Type VI secretion system, TssF-like PMA3_RS11325 ba1ce6b1d1bad355e5dff461fdf616c9 610 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 609 4.7E-214 T 13-09-2016 IPR010272 Type VI secretion system, TssF-like PMA3_RS11325 ba1ce6b1d1bad355e5dff461fdf616c9 610 PANTHER PTHR35370 3 610 1.0E-154 T 13-09-2016 PMA3_RS11325 ba1ce6b1d1bad355e5dff461fdf616c9 610 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 610 5.7E-212 T 13-09-2016 IPR010272 Type VI secretion system, TssF-like PMA3_RS19335 76fdec9a111a40051fdaf87a87b78613 282 PANTHER PTHR30177 9 271 3.4E-82 T 13-09-2016 PMA3_RS19335 76fdec9a111a40051fdaf87a87b78613 282 PANTHER PTHR30177:SF2 9 271 3.4E-82 T 13-09-2016 PMA3_RS19335 76fdec9a111a40051fdaf87a87b78613 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 275 3.8E-22 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS19335 76fdec9a111a40051fdaf87a87b78613 282 SUPERFAMILY SSF161098 87 271 6.02E-36 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS19335 76fdec9a111a40051fdaf87a87b78613 282 Gene3D G3DSA:1.10.3720.10 85 271 4.9E-31 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS07700 1da602f835a11d79181713c65df70c34 284 Gene3D G3DSA:3.40.190.10 187 239 1.9E-5 T 13-09-2016 PMA3_RS07700 1da602f835a11d79181713c65df70c34 284 SUPERFAMILY SSF53850 95 282 1.14E-24 T 13-09-2016 PMA3_RS07700 1da602f835a11d79181713c65df70c34 284 SUPERFAMILY SSF46785 6 116 1.29E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07700 1da602f835a11d79181713c65df70c34 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 8.3E-20 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS07700 1da602f835a11d79181713c65df70c34 284 PANTHER PTHR30579:SF6 2 282 4.5E-138 T 13-09-2016 PMA3_RS07700 1da602f835a11d79181713c65df70c34 284 PANTHER PTHR30579 2 282 4.5E-138 T 13-09-2016 PMA3_RS07700 1da602f835a11d79181713c65df70c34 284 Gene3D G3DSA:1.10.10.10 7 91 1.1E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07700 1da602f835a11d79181713c65df70c34 284 Gene3D G3DSA:3.40.190.10 95 186 2.1E-16 T 13-09-2016 PMA3_RS07700 1da602f835a11d79181713c65df70c34 284 Pfam PF03466 LysR substrate binding domain 96 281 5.3E-23 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS22065 2c652604437e63c8734d0a4a470305ee 310 SUPERFAMILY SSF103481 50 146 4.58E-12 T 13-09-2016 PMA3_RS22065 2c652604437e63c8734d0a4a470305ee 310 SUPERFAMILY SSF103481 193 297 2.68E-12 T 13-09-2016 PMA3_RS22065 2c652604437e63c8734d0a4a470305ee 310 PANTHER PTHR22911 11 307 7.2E-115 T 13-09-2016 PMA3_RS22065 2c652604437e63c8734d0a4a470305ee 310 Pfam PF00892 EamA-like transporter family 158 294 1.8E-18 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS22065 2c652604437e63c8734d0a4a470305ee 310 Pfam PF00892 EamA-like transporter family 15 142 4.6E-14 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS22065 2c652604437e63c8734d0a4a470305ee 310 PANTHER PTHR22911:SF63 11 307 7.2E-115 T 13-09-2016 PMA3_RS29280 af7a194392bd8116d1788340b57f45e5 61 PIRSF PIRSF037657 1 60 3.6E-31 T 13-09-2016 IPR017254 Lipoprotein, LppL PMA3_RS29280 af7a194392bd8116d1788340b57f45e5 61 Pfam PF13627 Prokaryotic lipoprotein-attachment site 11 33 4.0E-9 T 13-09-2016 IPR032831 Prokaryotic lipoprotein-attachment site PMA3_RS06145 5e0f6dec7dbc031bbfb275c033e6c6d2 172 PANTHER PTHR40547:SF1 1 171 6.7E-48 T 13-09-2016 PMA3_RS06145 5e0f6dec7dbc031bbfb275c033e6c6d2 172 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 163 1.4E-48 T 13-09-2016 IPR018639 Domain of unknown function DUF2062 PMA3_RS06145 5e0f6dec7dbc031bbfb275c033e6c6d2 172 PANTHER PTHR40547 1 171 6.7E-48 T 13-09-2016 PMA3_RS00635 f07ff210b9dd06109e682e2e6e50413c 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 261 6.2E-14 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS00635 f07ff210b9dd06109e682e2e6e50413c 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 353 2.2E-70 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS00635 f07ff210b9dd06109e682e2e6e50413c 367 PANTHER PTHR30469 14 364 1.8E-134 T 13-09-2016 PMA3_RS00635 f07ff210b9dd06109e682e2e6e50413c 367 PANTHER PTHR30469:SF7 14 364 1.8E-134 T 13-09-2016 PMA3_RS00635 f07ff210b9dd06109e682e2e6e50413c 367 Gene3D G3DSA:2.40.50.100 59 92 7.1E-13 T 13-09-2016 PMA3_RS00635 f07ff210b9dd06109e682e2e6e50413c 367 Gene3D G3DSA:2.40.50.100 167 198 7.1E-13 T 13-09-2016 PMA3_RS00635 f07ff210b9dd06109e682e2e6e50413c 367 SUPERFAMILY SSF111369 48 262 2.35E-23 T 13-09-2016 PMA3_RS14510 0a5f0454ec69613f8cc8dab49c96d1ac 327 SUPERFAMILY SSF51679 22 318 4.58E-60 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS14510 0a5f0454ec69613f8cc8dab49c96d1ac 327 Gene3D G3DSA:3.20.20.30 10 318 2.3E-64 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS14510 0a5f0454ec69613f8cc8dab49c96d1ac 327 PANTHER PTHR30011:SF14 5 298 3.5E-80 T 13-09-2016 PMA3_RS14510 0a5f0454ec69613f8cc8dab49c96d1ac 327 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 14 318 3.8E-126 T 13-09-2016 IPR020020 Luciferase-type oxidoreductase PMA3_RS14510 0a5f0454ec69613f8cc8dab49c96d1ac 327 Pfam PF00296 Luciferase-like monooxygenase 27 234 2.0E-41 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS14510 0a5f0454ec69613f8cc8dab49c96d1ac 327 PANTHER PTHR30011 5 298 3.5E-80 T 13-09-2016 PMA3_RS10230 a89be87aa782902bed89a96ec12a952e 367 PANTHER PTHR13794:SF55 1 357 1.9E-50 T 13-09-2016 PMA3_RS10230 a89be87aa782902bed89a96ec12a952e 367 SMART SM00922 142 237 4.3E-13 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS10230 a89be87aa782902bed89a96ec12a952e 367 Gene3D G3DSA:3.20.20.120 124 350 4.7E-48 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS10230 a89be87aa782902bed89a96ec12a952e 367 Gene3D G3DSA:3.30.390.10 1 123 1.7E-35 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS10230 a89be87aa782902bed89a96ec12a952e 367 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 124 1.1E-15 T 13-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PMA3_RS10230 a89be87aa782902bed89a96ec12a952e 367 SUPERFAMILY SSF51604 124 360 4.06E-48 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS10230 a89be87aa782902bed89a96ec12a952e 367 PANTHER PTHR13794 1 357 1.9E-50 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS10230 a89be87aa782902bed89a96ec12a952e 367 SUPERFAMILY SSF54826 1 125 4.82E-25 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS10230 a89be87aa782902bed89a96ec12a952e 367 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 99 124 - T 13-09-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PMA3_RS10230 a89be87aa782902bed89a96ec12a952e 367 Pfam PF13378 Enolase C-terminal domain-like 148 356 1.2E-34 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS05655 fa7f3d40af599385d9a2906504fd3df8 336 PANTHER PTHR15162 1 331 5.6E-78 T 13-09-2016 PMA3_RS05655 fa7f3d40af599385d9a2906504fd3df8 336 Gene3D G3DSA:3.40.630.10 45 240 3.7E-16 T 13-09-2016 PMA3_RS05655 fa7f3d40af599385d9a2906504fd3df8 336 SUPERFAMILY SSF53187 6 330 3.97E-72 T 13-09-2016 PMA3_RS05655 fa7f3d40af599385d9a2906504fd3df8 336 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 6 328 3.7E-119 T 13-09-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 PMA3_RS05655 fa7f3d40af599385d9a2906504fd3df8 336 PIRSF PIRSF017020 1 336 2.2E-121 T 13-09-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 PMA3_RS05655 fa7f3d40af599385d9a2906504fd3df8 336 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 336 159.789 T 13-09-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 PMA3_RS05655 fa7f3d40af599385d9a2906504fd3df8 336 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 49 330 3.4E-72 T 13-09-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 Gene3D G3DSA:2.70.20.10 213 245 7.9E-37 T 13-09-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 Gene3D G3DSA:2.70.20.10 361 478 7.9E-37 T 13-09-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 SUPERFAMILY SSF56712 1 601 2.09E-180 T 13-09-2016 IPR023405 DNA topoisomerase, type IA, core domain PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 SMART SM00436 122 217 2.0E-30 T 13-09-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 Gene3D G3DSA:1.10.460.10 152 211 1.9E-51 T 13-09-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 Gene3D G3DSA:1.10.460.10 479 601 1.9E-51 T 13-09-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 SMART SM00437 272 555 3.6E-74 T 13-09-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 Pfam PF01131 DNA topoisomerase 149 589 1.5E-119 T 13-09-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 SMART SM00493 1 122 3.4E-22 T 13-09-2016 IPR006171 Toprim domain PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 1.8E-26 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 1.8E-26 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 1.8E-26 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 1.8E-26 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 518 532 1.8E-26 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 634 4.3E-209 T 13-09-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 Pfam PF01751 Toprim domain 2 129 2.5E-17 T 13-09-2016 IPR006171 Toprim domain PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 Gene3D G3DSA:3.40.50.140 1 147 5.5E-48 T 13-09-2016 IPR006171 Toprim domain PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 13-09-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 PANTHER PTHR11390 518 589 4.6E-158 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS12940 1a46e7ba40fb02e268571b1b9f2a5c44 649 PANTHER PTHR11390 1 500 4.6E-158 T 13-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 Gene3D G3DSA:3.30.450.40 18 183 6.9E-21 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 SMART SM00091 185 251 1.3E-6 T 13-09-2016 IPR000014 PAS domain PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 SMART SM00065 29 185 4.5E-11 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 Pfam PF00990 Diguanylate cyclase, GGDEF domain 308 465 2.8E-47 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 SUPERFAMILY SSF55781 15 171 3.05E-25 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 SMART SM00052 479 725 7.0E-125 T 13-09-2016 IPR001633 EAL domain PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 Pfam PF08448 PAS fold 195 298 3.1E-11 T 13-09-2016 IPR013656 PAS fold-4 PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 Gene3D G3DSA:3.20.20.450 483 732 2.6E-103 T 13-09-2016 IPR001633 EAL domain PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 Pfam PF00563 EAL domain 485 720 1.2E-78 T 13-09-2016 IPR001633 EAL domain PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 SMART SM00267 297 469 2.7E-58 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 Gene3D G3DSA:3.30.70.270 310 477 4.7E-56 T 13-09-2016 PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 PANTHER PTHR33121 275 286 6.0E-87 T 13-09-2016 PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 SUPERFAMILY SSF141868 485 732 1.31E-95 T 13-09-2016 IPR001633 EAL domain PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 Gene3D G3DSA:3.30.450.20 184 295 3.7E-21 T 13-09-2016 PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 SUPERFAMILY SSF55785 179 295 3.14E-19 T 13-09-2016 IPR000014 PAS domain PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 PANTHER PTHR33121:SF13 429 735 6.0E-87 T 13-09-2016 PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 PANTHER PTHR33121:SF13 275 286 6.0E-87 T 13-09-2016 PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 181 304 1.3E-19 T 13-09-2016 IPR000014 PAS domain PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 Pfam PF13185 GAF domain 30 171 8.7E-14 T 13-09-2016 IPR003018 GAF domain GO:0005515 PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 PANTHER PTHR33121 429 735 6.0E-87 T 13-09-2016 PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 SUPERFAMILY SSF55073 313 471 8.63E-49 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS09775 91a9a3a899b8229409638f8313c3a9ca 737 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 305 467 5.8E-43 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS08225 edd053fbe5fbdc9b3b3267613f5cc023 234 Pfam PF01709 Transcriptional regulator 8 229 3.5E-68 T 13-09-2016 IPR002876 Transcriptional regulator TACO1-like PMA3_RS08225 edd053fbe5fbdc9b3b3267613f5cc023 234 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 234 24.055 T 13-09-2016 IPR002876 Transcriptional regulator TACO1-like PMA3_RS08225 edd053fbe5fbdc9b3b3267613f5cc023 234 PANTHER PTHR12532 6 229 2.7E-71 T 13-09-2016 IPR002876 Transcriptional regulator TACO1-like PMA3_RS08225 edd053fbe5fbdc9b3b3267613f5cc023 234 Gene3D G3DSA:1.10.10.200 19 74 4.6E-21 T 13-09-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like PMA3_RS08225 edd053fbe5fbdc9b3b3267613f5cc023 234 Gene3D G3DSA:3.30.1270.10 78 130 1.6E-25 T 13-09-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 PMA3_RS08225 edd053fbe5fbdc9b3b3267613f5cc023 234 Gene3D G3DSA:3.30.1270.10 207 229 1.6E-25 T 13-09-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 PMA3_RS08225 edd053fbe5fbdc9b3b3267613f5cc023 234 Gene3D G3DSA:3.30.70.980 131 199 2.8E-18 T 13-09-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 PMA3_RS08225 edd053fbe5fbdc9b3b3267613f5cc023 234 SUPERFAMILY SSF75625 2 231 5.62E-67 T 13-09-2016 IPR029072 YebC-like PMA3_RS17545 03c94d6fb658e27a2e09a093b422bae4 448 PANTHER PTHR15498:SF49 44 282 9.5E-33 T 13-09-2016 PMA3_RS17545 03c94d6fb658e27a2e09a093b422bae4 448 PANTHER PTHR15498 44 282 9.5E-33 T 13-09-2016 PMA3_RS19490 a867aa121e7421855bbed50d96ae9fe5 145 PANTHER PTHR35585 2 133 7.4E-15 T 13-09-2016 PMA3_RS19490 a867aa121e7421855bbed50d96ae9fe5 145 PANTHER PTHR35585:SF1 2 133 7.4E-15 T 13-09-2016 PMA3_RS19490 a867aa121e7421855bbed50d96ae9fe5 145 Pfam PF01814 Hemerythrin HHE cation binding domain 3 119 4.9E-14 T 13-09-2016 IPR012312 Haemerythrin-like PMA3_RS19490 a867aa121e7421855bbed50d96ae9fe5 145 Gene3D G3DSA:1.20.120.520 6 141 2.0E-6 T 13-09-2016 PMA3_RS27580 f9571ed01aaad649dd62b7f1564d4d7b 109 SMART SM00450 7 101 4.9E-18 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS27580 f9571ed01aaad649dd62b7f1564d4d7b 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 29.513 T 13-09-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 PMA3_RS27580 f9571ed01aaad649dd62b7f1564d4d7b 109 Gene3D G3DSA:3.40.250.10 2 103 1.1E-26 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS27580 f9571ed01aaad649dd62b7f1564d4d7b 109 Pfam PF00581 Rhodanese-like domain 10 96 1.5E-13 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS27580 f9571ed01aaad649dd62b7f1564d4d7b 109 SUPERFAMILY SSF52821 1 99 1.57E-26 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS05780 97f25b3282a1760559e113916b20cbaf 108 SUPERFAMILY SSF101498 36 105 5.49E-20 T 13-09-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 PMA3_RS05780 97f25b3282a1760559e113916b20cbaf 108 Pfam PF04316 Anti-sigma-28 factor, FlgM 50 103 9.5E-19 T 13-09-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal PMA3_RS05780 97f25b3282a1760559e113916b20cbaf 108 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 12 105 4.7E-25 T 13-09-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 PMA3_RS18530 0ced284d34d1cf7c421747a9e8fce662 256 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 45.997 T 13-09-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF PMA3_RS18530 0ced284d34d1cf7c421747a9e8fce662 256 PANTHER PTHR30292 1 253 1.8E-119 T 13-09-2016 PMA3_RS18530 0ced284d34d1cf7c421747a9e8fce662 256 SUPERFAMILY SSF88713 3 251 2.96E-100 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS18530 0ced284d34d1cf7c421747a9e8fce662 256 Pfam PF03746 LamB/YcsF family 4 242 1.4E-102 T 13-09-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF PMA3_RS18530 0ced284d34d1cf7c421747a9e8fce662 256 PANTHER PTHR30292:SF0 1 253 1.8E-119 T 13-09-2016 PMA3_RS30040 e4936c31db706495dd04d2aa3bc5c414 135 Pfam PF03899 ATP synthase I chain 19 114 2.9E-22 T 13-09-2016 IPR005598 ATP synthase protein I PMA3_RS20690 74b18b9ace321437bad38b382f50a4b7 240 Gene3D G3DSA:3.40.1130.10 63 183 6.0E-22 T 13-09-2016 PMA3_RS20690 74b18b9ace321437bad38b382f50a4b7 240 PANTHER PTHR10434 1 235 1.6E-75 T 13-09-2016 PMA3_RS20690 74b18b9ace321437bad38b382f50a4b7 240 SUPERFAMILY SSF69593 2 233 9.29E-47 T 13-09-2016 PMA3_RS20690 74b18b9ace321437bad38b382f50a4b7 240 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 63 181 8.9E-44 T 13-09-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 PMA3_RS20690 74b18b9ace321437bad38b382f50a4b7 240 PANTHER PTHR10434:SF20 1 235 1.6E-75 T 13-09-2016 PMA3_RS20690 74b18b9ace321437bad38b382f50a4b7 240 SMART SM00563 68 183 1.6E-41 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS20690 74b18b9ace321437bad38b382f50a4b7 240 Pfam PF01553 Acyltransferase 67 181 5.3E-32 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 PANTHER PTHR20852:SF15 160 468 6.1E-260 T 13-09-2016 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 Pfam PF00120 Glutamine synthetase, catalytic domain 102 465 1.1E-135 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 258 273 - T 13-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 12 94 2.5E-29 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 SUPERFAMILY SSF54368 5 99 1.16E-32 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 PANTHER PTHR20852 1 137 6.1E-260 T 13-09-2016 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 PANTHER PTHR20852 160 468 6.1E-260 T 13-09-2016 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 PANTHER PTHR20852:SF15 1 137 6.1E-260 T 13-09-2016 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 Gene3D G3DSA:3.30.590.10 105 454 3.7E-135 T 13-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 Gene3D G3DSA:3.10.20.70 5 104 3.7E-36 T 13-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 SMART SM01230 101 378 1.2E-140 T 13-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 385 397 - T 13-09-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 13-09-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 467 6.5E-199 T 13-09-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PMA3_RS01185 b54accd07541c8ac4f9e3af7a2b8e649 468 SUPERFAMILY SSF55931 101 467 1.37E-134 T 13-09-2016 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 Pfam PF03466 LysR substrate binding domain 97 296 1.5E-30 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.6E-13 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 Gene3D G3DSA:3.40.190.10 173 269 1.0E-35 T 13-09-2016 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 SUPERFAMILY SSF46785 3 85 5.67E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 Gene3D G3DSA:3.40.190.10 90 172 4.4E-35 T 13-09-2016 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 Gene3D G3DSA:3.40.190.10 273 299 4.4E-35 T 13-09-2016 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 PANTHER PTHR30118 1 299 4.4E-105 T 13-09-2016 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 SUPERFAMILY SSF53850 90 297 9.18E-50 T 13-09-2016 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 PANTHER PTHR30118:SF8 1 299 4.4E-105 T 13-09-2016 PMA3_RS14235 8eacca9933631e827b88ca8b8e068af6 300 Gene3D G3DSA:1.10.10.10 1 85 1.3E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18715 3aa486f9800c3ea2c108e3a33e53e0f9 159 SUPERFAMILY SSF46785 9 145 1.19E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18715 3aa486f9800c3ea2c108e3a33e53e0f9 159 SMART SM00347 27 130 3.1E-19 T 13-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PMA3_RS18715 3aa486f9800c3ea2c108e3a33e53e0f9 159 Gene3D G3DSA:1.10.10.10 8 144 9.5E-30 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18715 3aa486f9800c3ea2c108e3a33e53e0f9 159 PANTHER PTHR33164 13 154 5.5E-26 T 13-09-2016 PMA3_RS18715 3aa486f9800c3ea2c108e3a33e53e0f9 159 Pfam PF12802 MarR family 33 94 5.9E-9 T 13-09-2016 PMA3_RS14635 778612c25453589e06cac4fb91e0bb15 297 PIRSF PIRSF000103 1 292 1.7E-76 T 13-09-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PMA3_RS14635 778612c25453589e06cac4fb91e0bb15 297 SUPERFAMILY SSF51735 2 163 4.11E-45 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14635 778612c25453589e06cac4fb91e0bb15 297 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 7.8E-50 T 13-09-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PMA3_RS14635 778612c25453589e06cac4fb91e0bb15 297 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 283 2.3E-35 T 13-09-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PMA3_RS14635 778612c25453589e06cac4fb91e0bb15 297 SUPERFAMILY SSF48179 163 291 1.47E-37 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS14635 778612c25453589e06cac4fb91e0bb15 297 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 291 1.8E-118 T 13-09-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 PMA3_RS14635 778612c25453589e06cac4fb91e0bb15 297 Gene3D G3DSA:3.40.50.720 1 163 2.7E-57 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14635 778612c25453589e06cac4fb91e0bb15 297 PANTHER PTHR22981:SF70 1 296 5.7E-131 T 13-09-2016 PMA3_RS14635 778612c25453589e06cac4fb91e0bb15 297 PANTHER PTHR22981 1 296 5.7E-131 T 13-09-2016 PMA3_RS14635 778612c25453589e06cac4fb91e0bb15 297 Gene3D G3DSA:1.10.1040.10 165 292 2.8E-40 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS30255 b96b47594838a4912584e521c459f5f1 552 Gene3D G3DSA:1.20.58.220 329 430 1.7E-4 T 13-09-2016 PMA3_RS30255 b96b47594838a4912584e521c459f5f1 552 Pfam PF01895 PhoU domain 340 424 1.3E-5 T 13-09-2016 IPR026022 PhoU domain PMA3_RS30255 b96b47594838a4912584e521c459f5f1 552 PANTHER PTHR10010:SF26 1 446 1.7E-38 T 13-09-2016 PMA3_RS30255 b96b47594838a4912584e521c459f5f1 552 Pfam PF02690 Na+/Pi-cotransporter 157 249 2.8E-10 T 13-09-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 PMA3_RS30255 b96b47594838a4912584e521c459f5f1 552 Pfam PF02690 Na+/Pi-cotransporter 13 147 2.9E-32 T 13-09-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 PMA3_RS30255 b96b47594838a4912584e521c459f5f1 552 SUPERFAMILY SSF109755 320 532 3.56E-24 T 13-09-2016 PMA3_RS30255 b96b47594838a4912584e521c459f5f1 552 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 521 5.0E-106 T 13-09-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 PMA3_RS30255 b96b47594838a4912584e521c459f5f1 552 PANTHER PTHR10010 1 446 1.7E-38 T 13-09-2016 PMA3_RS30255 b96b47594838a4912584e521c459f5f1 552 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 2.8E-101 T 13-09-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 PMA3_RS06385 a27acf0296bdfff99ea35d60730b24f5 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 4.1E-24 T 13-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PMA3_RS06385 a27acf0296bdfff99ea35d60730b24f5 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 118 1.6E-31 T 13-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PMA3_RS06385 a27acf0296bdfff99ea35d60730b24f5 127 PANTHER PTHR28259 1 124 1.2E-35 T 13-09-2016 PMA3_RS06385 a27acf0296bdfff99ea35d60730b24f5 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.138 T 13-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PMA3_RS14320 f7d8e5bbcad23758cefc59b3aeca4330 443 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS14320 f7d8e5bbcad23758cefc59b3aeca4330 443 SUPERFAMILY SSF103473 8 437 6.28E-74 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS14320 f7d8e5bbcad23758cefc59b3aeca4330 443 Gene3D G3DSA:1.20.1250.20 24 202 6.3E-24 T 13-09-2016 PMA3_RS14320 f7d8e5bbcad23758cefc59b3aeca4330 443 Pfam PF00083 Sugar (and other) transporter 47 437 1.4E-50 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS14320 f7d8e5bbcad23758cefc59b3aeca4330 443 Gene3D G3DSA:1.20.1250.20 242 432 3.7E-18 T 13-09-2016 PMA3_RS14320 f7d8e5bbcad23758cefc59b3aeca4330 443 PANTHER PTHR23511 5 437 6.8E-83 T 13-09-2016 PMA3_RS16520 bb02e13f9c269917a1e993089dc9cedb 253 PANTHER PTHR11922:SF18 156 251 3.5E-54 T 13-09-2016 PMA3_RS16520 bb02e13f9c269917a1e993089dc9cedb 253 SUPERFAMILY SSF52317 4 246 2.75E-39 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS16520 bb02e13f9c269917a1e993089dc9cedb 253 PANTHER PTHR11922 26 69 3.5E-54 T 13-09-2016 PMA3_RS16520 bb02e13f9c269917a1e993089dc9cedb 253 PANTHER PTHR11922:SF18 26 69 3.5E-54 T 13-09-2016 PMA3_RS16520 bb02e13f9c269917a1e993089dc9cedb 253 PANTHER PTHR11922:SF18 85 140 3.5E-54 T 13-09-2016 PMA3_RS16520 bb02e13f9c269917a1e993089dc9cedb 253 PANTHER PTHR11922 85 140 3.5E-54 T 13-09-2016 PMA3_RS16520 bb02e13f9c269917a1e993089dc9cedb 253 Gene3D G3DSA:3.40.50.880 4 246 8.6E-48 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS16520 bb02e13f9c269917a1e993089dc9cedb 253 Pfam PF07722 Peptidase C26 5 223 5.7E-71 T 13-09-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 PMA3_RS16520 bb02e13f9c269917a1e993089dc9cedb 253 PANTHER PTHR11922 156 251 3.5E-54 T 13-09-2016 PMA3_RS07950 67697efa297abccf2a66a2978d991090 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 118 6.1E-6 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS07950 67697efa297abccf2a66a2978d991090 122 SUPERFAMILY SSF54593 1 121 1.22E-18 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS07950 67697efa297abccf2a66a2978d991090 122 Gene3D G3DSA:3.10.180.10 3 121 5.0E-20 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS21560 bdf7c11de1ae9cc03bf9e0894a0abbb9 277 SUPERFAMILY SSF50341 123 257 7.59E-15 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS21560 bdf7c11de1ae9cc03bf9e0894a0abbb9 277 Pfam PF01584 CheW-like domain 125 256 1.4E-12 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS21560 bdf7c11de1ae9cc03bf9e0894a0abbb9 277 SMART SM00260 121 256 1.7E-17 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS21720 56f4d91fbe9dfc380e5e39f09d8b2e50 266 PANTHER PTHR34982:SF2 39 246 1.3E-58 T 13-09-2016 PMA3_RS21720 56f4d91fbe9dfc380e5e39f09d8b2e50 266 SUPERFAMILY SSF160527 129 233 2.09E-7 T 13-09-2016 PMA3_RS21720 56f4d91fbe9dfc380e5e39f09d8b2e50 266 Pfam PF02108 Flagellar assembly protein FliH 101 224 3.8E-32 T 13-09-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PMA3_RS21720 56f4d91fbe9dfc380e5e39f09d8b2e50 266 PANTHER PTHR34982 39 246 1.3E-58 T 13-09-2016 PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 Pfam PF00271 Helicase conserved C-terminal domain 519 592 5.4E-5 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 SMART SM00487 199 399 8.6E-24 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 PANTHER PTHR30580 1 739 3.9E-267 T 13-09-2016 PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 SMART SM00490 496 593 6.1E-5 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 Gene3D G3DSA:3.40.50.300 193 386 9.7E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 SUPERFAMILY SSF52540 464 618 9.69E-21 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 738 25.139 T 13-09-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 Gene3D G3DSA:3.40.50.300 464 637 4.9E-26 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 TIGRFAM TIGR00595 priA: primosomal protein N' 225 736 2.2E-184 T 13-09-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 Pfam PF00270 DEAD/DEAH box helicase 205 367 8.8E-16 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS01455 206305078aa2ebb64c118de9154dab22 739 SUPERFAMILY SSF52540 182 384 2.43E-44 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29340 73676165768747e66b0745869fba5e04 87 SUPERFAMILY SSF47413 10 81 1.87E-13 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS29340 73676165768747e66b0745869fba5e04 87 PANTHER PTHR36924:SF1 2 87 4.8E-20 T 13-09-2016 PMA3_RS29340 73676165768747e66b0745869fba5e04 87 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 80 1.1E-20 T 13-09-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 PMA3_RS29340 73676165768747e66b0745869fba5e04 87 Gene3D G3DSA:1.10.260.40 7 80 8.9E-20 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS29340 73676165768747e66b0745869fba5e04 87 PANTHER PTHR36924 2 87 4.8E-20 T 13-09-2016 PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 SMART SM00387 374 482 3.2E-16 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 SMART SM00388 269 333 0.0042 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 Gene3D G3DSA:1.10.287.130 272 326 6.7E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 Gene3D G3DSA:3.30.565.10 335 478 1.9E-27 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 478 4.6E-14 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 PANTHER PTHR24423 7 22 4.1E-27 T 13-09-2016 PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 PANTHER PTHR24423 253 482 4.1E-27 T 13-09-2016 PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 PANTHER PTHR24423 177 215 4.1E-27 T 13-09-2016 PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 SUPERFAMILY SSF55874 330 478 1.83E-25 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 Pfam PF00512 His Kinase A (phospho-acceptor) domain 272 325 3.4E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 SUPERFAMILY SSF47384 272 329 1.96E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 4.1E-6 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 427 4.1E-6 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS18360 c19e7bbae5288166c3ddeeef2254000f 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 441 4.1E-6 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS27205 d06ad2e727e734bed6ee3936c2b338ae 179 Gene3D G3DSA:3.30.1440.10 1 179 3.5E-76 T 13-09-2016 IPR022803 Ribosomal protein L5 domain PMA3_RS27205 d06ad2e727e734bed6ee3936c2b338ae 179 PIRSF PIRSF002161 1 179 2.3E-62 T 13-09-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 PMA3_RS27205 d06ad2e727e734bed6ee3936c2b338ae 179 SUPERFAMILY SSF55282 3 179 1.88E-76 T 13-09-2016 IPR022803 Ribosomal protein L5 domain PMA3_RS27205 d06ad2e727e734bed6ee3936c2b338ae 179 Pfam PF00281 Ribosomal protein L5 24 80 7.2E-27 T 13-09-2016 IPR031310 Ribosomal protein L5, N-terminal PMA3_RS27205 d06ad2e727e734bed6ee3936c2b338ae 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 4.1E-40 T 13-09-2016 IPR031309 Ribosomal protein L5, C-terminal PMA3_RS27205 d06ad2e727e734bed6ee3936c2b338ae 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.313 T 13-09-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27205 d06ad2e727e734bed6ee3936c2b338ae 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 13-09-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27205 d06ad2e727e734bed6ee3936c2b338ae 179 PANTHER PTHR11994 1 178 1.3E-94 T 13-09-2016 PMA3_RS22050 c7cbe39304aee4146381fbbc5299adfb 459 Pfam PF00474 Sodium:solute symporter family 32 412 5.3E-37 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS22050 c7cbe39304aee4146381fbbc5299adfb 459 PANTHER PTHR11819 1 455 2.9E-177 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS22050 c7cbe39304aee4146381fbbc5299adfb 459 PANTHER PTHR11819:SF141 1 455 2.9E-177 T 13-09-2016 PMA3_RS18735 b42b5105d2405b172d43ea622e1da2f2 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 283 5.1E-34 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS18735 b42b5105d2405b172d43ea622e1da2f2 295 PANTHER PTHR11795:SF379 1 295 2.3E-112 T 13-09-2016 PMA3_RS18735 b42b5105d2405b172d43ea622e1da2f2 295 PANTHER PTHR11795 1 295 2.3E-112 T 13-09-2016 PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 SUPERFAMILY SSF51735 2 247 2.81E-71 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.6E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.6E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.6E-12 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 Gene3D G3DSA:3.40.50.720 2 248 4.8E-75 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PANTHER PTHR24322 157 189 8.7E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PANTHER PTHR24322 7 140 8.7E-46 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.3E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.3E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.3E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.3E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.3E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS15000 1f7564f65d4e29a6b09688aaa4b20d32 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 247 2.6E-55 T 13-09-2016 PMA3_RS19415 82a5987480f3043482b5e3344b4a394c 104 Pfam PF07978 NIPSNAP 6 99 4.6E-25 T 13-09-2016 IPR012577 NIPSNAP PMA3_RS19415 82a5987480f3043482b5e3344b4a394c 104 SUPERFAMILY SSF54909 2 99 1.82E-21 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS19285 ea0a50017c2b342fc4493164dcd8b38b 405 SUPERFAMILY SSF56529 165 373 7.33E-24 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS19285 ea0a50017c2b342fc4493164dcd8b38b 405 Gene3D G3DSA:3.90.850.10 184 372 2.5E-21 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS19285 ea0a50017c2b342fc4493164dcd8b38b 405 PANTHER PTHR11820:SF82 187 383 7.1E-72 T 13-09-2016 PMA3_RS19285 ea0a50017c2b342fc4493164dcd8b38b 405 PANTHER PTHR11820 187 383 7.1E-72 T 13-09-2016 PMA3_RS19285 ea0a50017c2b342fc4493164dcd8b38b 405 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 229 370 3.3E-7 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS11695 0ff0f92d2ffd5b55e00a05b06759ef64 553 Pfam PF06980 Protein of unknown function (DUF1302) 37 553 2.4E-112 T 13-09-2016 IPR010727 Protein of unknown function DUF1302 PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 SMART SM00345 27 85 6.1E-18 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 PANTHER PTHR11751 24 111 6.1E-24 T 13-09-2016 PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 SMART SM00895 95 218 1.3E-20 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 Pfam PF07729 FCD domain 95 217 7.7E-23 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 SUPERFAMILY SSF48008 90 219 1.52E-27 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 85 8.0E-18 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 SUPERFAMILY SSF46785 24 89 1.11E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 Gene3D G3DSA:1.20.120.530 88 223 2.1E-31 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 1.8E-5 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 1.8E-5 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS20360 80895cc35a0c3cb6c6b2eefd404a7a9a 254 Gene3D G3DSA:1.10.10.10 9 86 1.0E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15840 b8606f10a29d87356157b216c6394b81 260 Gene3D G3DSA:3.20.20.150 1 258 2.6E-79 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS15840 b8606f10a29d87356157b216c6394b81 260 SUPERFAMILY SSF51658 4 251 3.51E-63 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS15840 b8606f10a29d87356157b216c6394b81 260 Pfam PF01261 Xylose isomerase-like TIM barrel 111 200 4.0E-8 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS00400 f07099d1cd60616942dacb1dd0040e7c 288 PANTHER PTHR30151:SF16 8 288 3.9E-136 T 13-09-2016 PMA3_RS00400 f07099d1cd60616942dacb1dd0040e7c 288 Gene3D G3DSA:1.10.3720.10 81 279 8.5E-19 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00400 f07099d1cd60616942dacb1dd0040e7c 288 SUPERFAMILY SSF161098 82 269 5.76E-26 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00400 f07099d1cd60616942dacb1dd0040e7c 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 283 8.2E-14 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00400 f07099d1cd60616942dacb1dd0040e7c 288 PANTHER PTHR30151 8 288 3.9E-136 T 13-09-2016 PMA3_RS01485 8523e47f89396f359c49bddc3f1cd0e7 354 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 353 4.2E-141 T 13-09-2016 IPR005883 Type IV pilus assembly protein PilM PMA3_RS01485 8523e47f89396f359c49bddc3f1cd0e7 354 Pfam PF11104 Type IV pilus assembly protein PilM; 14 353 1.1E-141 T 13-09-2016 IPR005883 Type IV pilus assembly protein PilM PMA3_RS01485 8523e47f89396f359c49bddc3f1cd0e7 354 PIRSF PIRSF019169 1 354 2.1E-128 T 13-09-2016 IPR005883 Type IV pilus assembly protein PilM PMA3_RS01485 8523e47f89396f359c49bddc3f1cd0e7 354 SMART SM00842 12 179 1.9E-4 T 13-09-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PMA3_RS01485 8523e47f89396f359c49bddc3f1cd0e7 354 Gene3D G3DSA:3.30.420.40 7 104 7.3E-9 T 13-09-2016 PMA3_RS01485 8523e47f89396f359c49bddc3f1cd0e7 354 SUPERFAMILY SSF53067 12 177 3.63E-13 T 13-09-2016 PMA3_RS01485 8523e47f89396f359c49bddc3f1cd0e7 354 Gene3D G3DSA:3.30.420.40 196 316 5.8E-29 T 13-09-2016 PMA3_RS01485 8523e47f89396f359c49bddc3f1cd0e7 354 PANTHER PTHR32432:SF3 1 353 2.0E-97 T 13-09-2016 PMA3_RS01485 8523e47f89396f359c49bddc3f1cd0e7 354 PANTHER PTHR32432 1 353 2.0E-97 T 13-09-2016 PMA3_RS01485 8523e47f89396f359c49bddc3f1cd0e7 354 SUPERFAMILY SSF53067 191 352 6.02E-28 T 13-09-2016 PMA3_RS25060 48095098691aaadafc1a71925dbc6a46 217 Gene3D G3DSA:1.10.10.640 170 207 9.8E-20 T 13-09-2016 IPR023094 Toluene tolerance protein, alpha-helical PMA3_RS25060 48095098691aaadafc1a71925dbc6a46 217 Gene3D G3DSA:1.10.10.640 72 113 9.8E-20 T 13-09-2016 IPR023094 Toluene tolerance protein, alpha-helical PMA3_RS25060 48095098691aaadafc1a71925dbc6a46 217 Gene3D G3DSA:3.10.450.50 27 71 1.2E-21 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS25060 48095098691aaadafc1a71925dbc6a46 217 Gene3D G3DSA:3.10.450.50 116 169 1.2E-21 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS25060 48095098691aaadafc1a71925dbc6a46 217 PANTHER PTHR36573 1 212 1.9E-61 T 13-09-2016 PMA3_RS25060 48095098691aaadafc1a71925dbc6a46 217 PIRSF PIRSF004649 1 211 8.4E-60 T 13-09-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PMA3_RS25060 48095098691aaadafc1a71925dbc6a46 217 Pfam PF05494 MlaC protein 33 197 6.2E-40 T 13-09-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PMA3_RS12565 1ef602e1e5f7a4732cc69b89e6e2d697 251 PANTHER PTHR40267 1 246 5.2E-32 T 13-09-2016 PMA3_RS12565 1ef602e1e5f7a4732cc69b89e6e2d697 251 PIRSF PIRSF015736 1 251 9.8E-70 T 13-09-2016 IPR026286 Maleate isomerase/Arylmalonate decarboxylase PMA3_RS12565 1ef602e1e5f7a4732cc69b89e6e2d697 251 Hamap MF_00943 Maleate isomerase [maiA]. 5 250 50.215 T 13-09-2016 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 PMA3_RS01860 65dcb52777e0763ded4d8a61d689fe2f 390 Pfam PF04932 O-Antigen ligase 189 311 1.0E-11 T 13-09-2016 IPR007016 O-antigen ligase-related PMA3_RS23640 750254b03ee1f9b7448a786e430bf57c 382 PANTHER PTHR30469 321 377 2.7E-124 T 13-09-2016 PMA3_RS23640 750254b03ee1f9b7448a786e430bf57c 382 SUPERFAMILY SSF111369 60 273 2.48E-43 T 13-09-2016 PMA3_RS23640 750254b03ee1f9b7448a786e430bf57c 382 PANTHER PTHR30469:SF11 1 305 2.7E-124 T 13-09-2016 PMA3_RS23640 750254b03ee1f9b7448a786e430bf57c 382 PANTHER PTHR30469 1 305 2.7E-124 T 13-09-2016 PMA3_RS23640 750254b03ee1f9b7448a786e430bf57c 382 Gene3D G3DSA:2.40.50.100 70 102 2.1E-14 T 13-09-2016 PMA3_RS23640 750254b03ee1f9b7448a786e430bf57c 382 Gene3D G3DSA:2.40.50.100 163 194 2.1E-14 T 13-09-2016 PMA3_RS23640 750254b03ee1f9b7448a786e430bf57c 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 366 3.9E-77 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS23640 750254b03ee1f9b7448a786e430bf57c 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 269 1.8E-35 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS23640 750254b03ee1f9b7448a786e430bf57c 382 PANTHER PTHR30469:SF11 321 377 2.7E-124 T 13-09-2016 PMA3_RS23640 750254b03ee1f9b7448a786e430bf57c 382 Pfam PF00529 HlyD membrane-fusion protein of T1SS 43 247 5.4E-7 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS18740 2eadb5737fc3167b0cad9c977129bd75 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 303 4.5E-35 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS18740 2eadb5737fc3167b0cad9c977129bd75 327 PANTHER PTHR30482 28 318 3.3E-104 T 13-09-2016 PMA3_RS18740 2eadb5737fc3167b0cad9c977129bd75 327 PANTHER PTHR30482:SF8 28 318 3.3E-104 T 13-09-2016 PMA3_RS18950 9757dc8a9a71e5c0902fff1276a19bf4 293 Pfam PF10547 P22_AR N-terminal domain 8 115 9.4E-41 T 13-09-2016 IPR018875 Antirepressor protein ANT, N-terminal PMA3_RS18950 9757dc8a9a71e5c0902fff1276a19bf4 293 PRINTS PR01994 Antirepressor protein ANT signature 69 92 8.7E-28 T 13-09-2016 IPR018875 Antirepressor protein ANT, N-terminal PMA3_RS18950 9757dc8a9a71e5c0902fff1276a19bf4 293 PRINTS PR01994 Antirepressor protein ANT signature 25 46 8.7E-28 T 13-09-2016 IPR018875 Antirepressor protein ANT, N-terminal PMA3_RS18950 9757dc8a9a71e5c0902fff1276a19bf4 293 PRINTS PR01994 Antirepressor protein ANT signature 93 115 8.7E-28 T 13-09-2016 IPR018875 Antirepressor protein ANT, N-terminal PMA3_RS13520 2650a030d7645dc23bbe0ae7ef9ac7b0 152 Gene3D G3DSA:1.20.120.520 4 150 1.2E-14 T 13-09-2016 PMA3_RS13520 2650a030d7645dc23bbe0ae7ef9ac7b0 152 Pfam PF01814 Hemerythrin HHE cation binding domain 6 135 3.2E-10 T 13-09-2016 IPR012312 Haemerythrin-like PMA3_RS01650 08c80ed22ca6a9392503afe0270aa009 244 SUPERFAMILY SSF53448 6 231 6.66E-26 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS01650 08c80ed22ca6a9392503afe0270aa009 244 Gene3D G3DSA:3.90.550.10 7 115 1.6E-11 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS01650 08c80ed22ca6a9392503afe0270aa009 244 PANTHER PTHR10859:SF84 7 243 8.8E-92 T 13-09-2016 PMA3_RS01650 08c80ed22ca6a9392503afe0270aa009 244 PANTHER PTHR10859 7 243 8.8E-92 T 13-09-2016 PMA3_RS01650 08c80ed22ca6a9392503afe0270aa009 244 Pfam PF00535 Glycosyl transferase family 2 5 119 1.6E-16 T 13-09-2016 IPR001173 Glycosyltransferase 2-like PMA3_RS04265 d28efd6ab9893f4a0531d7a3dc4a4557 218 Gene3D G3DSA:3.40.50.1820 4 215 4.6E-67 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS04265 d28efd6ab9893f4a0531d7a3dc4a4557 218 SUPERFAMILY SSF53474 11 215 9.39E-48 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS04265 d28efd6ab9893f4a0531d7a3dc4a4557 218 Pfam PF02230 Phospholipase/Carboxylesterase 4 214 5.0E-43 T 13-09-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 PMA3_RS04265 d28efd6ab9893f4a0531d7a3dc4a4557 218 PANTHER PTHR10655 1 215 2.2E-59 T 13-09-2016 PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 Pfam PF08443 RimK-like ATP-grasp domain 329 431 2.1E-9 T 13-09-2016 IPR013651 ATP-grasp fold, RimK-type PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 PANTHER PTHR23091:SF122 91 300 6.5E-39 T 13-09-2016 PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 SUPERFAMILY SSF56059 331 436 5.13E-29 T 13-09-2016 PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 SUPERFAMILY SSF56059 497 560 5.13E-29 T 13-09-2016 PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 Gene3D G3DSA:3.30.470.20 407 434 1.0E-12 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 Gene3D G3DSA:3.30.470.20 320 330 1.0E-12 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 Gene3D G3DSA:3.30.470.20 477 575 1.0E-12 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 TIGRFAM TIGR03103 trio_acet_GNAT: GNAT-family acetyltransferase TIGR03103 39 579 2.0E-268 T 13-09-2016 IPR017534 GNAT-acetyltransferase PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 Gene3D G3DSA:3.40.630.30 118 251 1.6E-17 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 Pfam PF00583 Acetyltransferase (GNAT) family 164 246 1.6E-13 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 Gene3D G3DSA:3.30.1490.20 331 406 3.0E-7 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 PANTHER PTHR23091 91 300 6.5E-39 T 13-09-2016 PMA3_RS06865 cf31790bb22a3e0aa9db9a5f2cc2849a 582 SUPERFAMILY SSF55729 11 250 8.19E-25 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS26680 018fffb3341ff54704ea3a5ba27b9509 210 Gene3D G3DSA:3.40.50.1950 7 205 4.4E-73 T 13-09-2016 IPR003382 Flavoprotein GO:0003824 PMA3_RS26680 018fffb3341ff54704ea3a5ba27b9509 210 PANTHER PTHR30108:SF2 78 209 1.7E-85 T 13-09-2016 PMA3_RS26680 018fffb3341ff54704ea3a5ba27b9509 210 PANTHER PTHR30108:SF2 1 61 1.7E-85 T 13-09-2016 PMA3_RS26680 018fffb3341ff54704ea3a5ba27b9509 210 PANTHER PTHR30108 78 209 1.7E-85 T 13-09-2016 PMA3_RS26680 018fffb3341ff54704ea3a5ba27b9509 210 PANTHER PTHR30108 1 61 1.7E-85 T 13-09-2016 PMA3_RS26680 018fffb3341ff54704ea3a5ba27b9509 210 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 35.478 T 13-09-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 PMA3_RS26680 018fffb3341ff54704ea3a5ba27b9509 210 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 7 201 6.0E-60 T 13-09-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 PMA3_RS26680 018fffb3341ff54704ea3a5ba27b9509 210 Pfam PF02441 Flavoprotein 7 146 4.1E-26 T 13-09-2016 IPR003382 Flavoprotein GO:0003824 PMA3_RS26680 018fffb3341ff54704ea3a5ba27b9509 210 SUPERFAMILY SSF52507 7 203 1.3E-58 T 13-09-2016 IPR003382 Flavoprotein GO:0003824 PMA3_RS00720 b9834599df666105a21a847c2f75777f 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 259 1.6E-70 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS00720 b9834599df666105a21a847c2f75777f 264 SMART SM00062 41 261 4.3E-84 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS00720 b9834599df666105a21a847c2f75777f 264 Gene3D G3DSA:3.40.190.10 119 221 7.9E-29 T 13-09-2016 PMA3_RS00720 b9834599df666105a21a847c2f75777f 264 PANTHER PTHR18966:SF189 29 258 1.6E-113 T 13-09-2016 PMA3_RS00720 b9834599df666105a21a847c2f75777f 264 Gene3D G3DSA:3.40.190.10 222 262 2.0E-46 T 13-09-2016 PMA3_RS00720 b9834599df666105a21a847c2f75777f 264 Gene3D G3DSA:3.40.190.10 38 118 2.0E-46 T 13-09-2016 PMA3_RS00720 b9834599df666105a21a847c2f75777f 264 PANTHER PTHR18966 29 258 1.6E-113 T 13-09-2016 PMA3_RS00720 b9834599df666105a21a847c2f75777f 264 SUPERFAMILY SSF53850 16 261 3.3E-76 T 13-09-2016 PMA3_RS00720 b9834599df666105a21a847c2f75777f 264 SMART SM00079 41 260 1.3E-4 T 13-09-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PMA3_RS15110 736838d26111f27efe1b85f66f78e640 838 PANTHER PTHR11558:SF4 528 762 2.3E-19 T 13-09-2016 PMA3_RS15110 736838d26111f27efe1b85f66f78e640 838 Gene3D G3DSA:3.40.50.150 519 755 8.0E-32 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS15110 736838d26111f27efe1b85f66f78e640 838 SUPERFAMILY SSF53335 477 729 2.16E-33 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS15110 736838d26111f27efe1b85f66f78e640 838 Pfam PF01564 Spermine/spermidine synthase 527 648 1.8E-5 T 13-09-2016 PMA3_RS15110 736838d26111f27efe1b85f66f78e640 838 Gene3D G3DSA:1.20.1250.20 27 217 3.3E-5 T 13-09-2016 PMA3_RS15110 736838d26111f27efe1b85f66f78e640 838 PANTHER PTHR11558 528 762 2.3E-19 T 13-09-2016 PMA3_RS15110 736838d26111f27efe1b85f66f78e640 838 SUPERFAMILY SSF103473 23 433 4.58E-13 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS25685 76f97cc32612055d89607fb59a621f1f 230 SMART SM00421 169 226 9.4E-11 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS25685 76f97cc32612055d89607fb59a621f1f 230 Gene3D G3DSA:1.10.10.10 169 225 3.6E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25685 76f97cc32612055d89607fb59a621f1f 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 172 225 3.8E-13 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS25685 76f97cc32612055d89607fb59a621f1f 230 SUPERFAMILY SSF46894 163 226 8.84E-15 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS25685 76f97cc32612055d89607fb59a621f1f 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 214 8.4E-8 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS25685 76f97cc32612055d89607fb59a621f1f 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 186 8.4E-8 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS25685 76f97cc32612055d89607fb59a621f1f 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 202 8.4E-8 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS17770 6e592cde315902a328a841cb8eec727b 219 Gene3D G3DSA:1.10.357.10 60 192 6.5E-17 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS17770 6e592cde315902a328a841cb8eec727b 219 SUPERFAMILY SSF46689 15 82 1.65E-14 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17770 6e592cde315902a328a841cb8eec727b 219 Gene3D G3DSA:1.10.10.60 15 59 4.5E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17770 6e592cde315902a328a841cb8eec727b 219 SUPERFAMILY SSF48498 82 136 5.56E-5 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS17770 6e592cde315902a328a841cb8eec727b 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 8.7E-6 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS17770 6e592cde315902a328a841cb8eec727b 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 8.7E-6 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS17770 6e592cde315902a328a841cb8eec727b 219 PANTHER PTHR30055 18 206 5.2E-22 T 13-09-2016 PMA3_RS17770 6e592cde315902a328a841cb8eec727b 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 5.8E-12 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS20085 97342253864c8b1f8871d572094076ec 302 PANTHER PTHR30537 1 297 9.0E-142 T 13-09-2016 PMA3_RS20085 97342253864c8b1f8871d572094076ec 302 Gene3D G3DSA:3.40.190.10 181 264 1.8E-21 T 13-09-2016 PMA3_RS20085 97342253864c8b1f8871d572094076ec 302 SUPERFAMILY SSF53850 90 298 5.25E-39 T 13-09-2016 PMA3_RS20085 97342253864c8b1f8871d572094076ec 302 SUPERFAMILY SSF46785 4 87 1.6E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20085 97342253864c8b1f8871d572094076ec 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.4E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS20085 97342253864c8b1f8871d572094076ec 302 PANTHER PTHR30537:SF29 1 297 9.0E-142 T 13-09-2016 PMA3_RS20085 97342253864c8b1f8871d572094076ec 302 Pfam PF03466 LysR substrate binding domain 89 296 7.3E-38 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS20085 97342253864c8b1f8871d572094076ec 302 Gene3D G3DSA:1.10.10.10 4 87 1.5E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS20085 97342253864c8b1f8871d572094076ec 302 Gene3D G3DSA:3.40.190.10 94 180 2.8E-16 T 13-09-2016 PMA3_RS03120 f5572ee360f012362e013d25e0801999 617 Pfam PF13387 Domain of unknown function (DUF4105) 118 290 1.1E-60 T 13-09-2016 IPR025178 Domain of unknown function DUF4105 PMA3_RS28300 e8dbd7f9e59b19a1bdfadd08ec7267ef 183 SUPERFAMILY SSF81342 5 182 2.28E-39 T 13-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PMA3_RS28300 e8dbd7f9e59b19a1bdfadd08ec7267ef 183 PANTHER PTHR30529 2 183 3.5E-82 T 13-09-2016 PMA3_RS28300 e8dbd7f9e59b19a1bdfadd08ec7267ef 183 Gene3D G3DSA:1.20.950.20 92 172 8.9E-4 T 13-09-2016 PMA3_RS28300 e8dbd7f9e59b19a1bdfadd08ec7267ef 183 PANTHER PTHR30529:SF5 2 183 3.5E-82 T 13-09-2016 PMA3_RS28300 e8dbd7f9e59b19a1bdfadd08ec7267ef 183 Pfam PF01292 Prokaryotic cytochrome b561 9 180 1.5E-30 T 13-09-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PMA3_RS13815 69adae5f146a690b53e5903499c25509 447 PANTHER PTHR32507:SF12 1 270 1.8E-140 T 13-09-2016 PMA3_RS13815 69adae5f146a690b53e5903499c25509 447 PANTHER PTHR32507 315 443 1.8E-140 T 13-09-2016 PMA3_RS13815 69adae5f146a690b53e5903499c25509 447 Pfam PF00999 Sodium/hydrogen exchanger family 10 270 2.3E-30 T 13-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PMA3_RS13815 69adae5f146a690b53e5903499c25509 447 Pfam PF00999 Sodium/hydrogen exchanger family 332 437 3.5E-8 T 13-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PMA3_RS13815 69adae5f146a690b53e5903499c25509 447 PANTHER PTHR32507 1 270 1.8E-140 T 13-09-2016 PMA3_RS13815 69adae5f146a690b53e5903499c25509 447 PANTHER PTHR32507:SF12 315 443 1.8E-140 T 13-09-2016 PMA3_RS19215 dfe71018bc5343198de243b193970f6e 466 PANTHER PTHR39479:SF2 1 462 2.7E-259 T 13-09-2016 PMA3_RS19215 dfe71018bc5343198de243b193970f6e 466 SMART SM01150 13 413 9.4E-234 T 13-09-2016 IPR009770 Domain of unknown function DUF1338 PMA3_RS19215 dfe71018bc5343198de243b193970f6e 466 PANTHER PTHR39479 1 462 2.7E-259 T 13-09-2016 PMA3_RS19215 dfe71018bc5343198de243b193970f6e 466 Pfam PF07063 Domain of unknown function (DUF1338) 11 413 1.5E-122 T 13-09-2016 IPR009770 Domain of unknown function DUF1338 PMA3_RS00140 ffa7ca5a86875614b244b3481b1abd9a 683 SUPERFAMILY SSF55486 4 666 5.44E-117 T 13-09-2016 PMA3_RS00140 ffa7ca5a86875614b244b3481b1abd9a 683 Gene3D G3DSA:3.40.390.10 361 506 3.5E-36 T 13-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PMA3_RS00140 ffa7ca5a86875614b244b3481b1abd9a 683 PANTHER PTHR11804 3 671 4.8E-142 T 13-09-2016 PMA3_RS00140 ffa7ca5a86875614b244b3481b1abd9a 683 Gene3D G3DSA:1.20.1050.40 13 143 6.8E-11 T 13-09-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal PMA3_RS00140 ffa7ca5a86875614b244b3481b1abd9a 683 PANTHER PTHR11804:SF8 3 671 4.8E-142 T 13-09-2016 PMA3_RS00140 ffa7ca5a86875614b244b3481b1abd9a 683 Gene3D G3DSA:1.10.1370.10 507 664 2.4E-78 T 13-09-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PMA3_RS00140 ffa7ca5a86875614b244b3481b1abd9a 683 Gene3D G3DSA:1.10.1370.10 144 352 2.4E-78 T 13-09-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PMA3_RS00140 ffa7ca5a86875614b244b3481b1abd9a 683 Pfam PF01432 Peptidase family M3 226 665 3.4E-90 T 13-09-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 PMA3_RS24815 935a59fcfbc2677e0de65f32e5e01008 267 Pfam PF13371 Tetratricopeptide repeat 186 257 1.0E-11 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS24815 935a59fcfbc2677e0de65f32e5e01008 267 Pfam PF13369 Transglutaminase-like superfamily 38 183 6.1E-32 T 13-09-2016 IPR032698 Protein SirB1, N-terminal PMA3_RS24815 935a59fcfbc2677e0de65f32e5e01008 267 PANTHER PTHR31350 60 246 6.2E-21 T 13-09-2016 PMA3_RS15245 99e5b81259ba689420ff9eb0e980288b 526 Gene3D G3DSA:3.40.605.10 7 265 3.5E-48 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS15245 99e5b81259ba689420ff9eb0e980288b 526 PANTHER PTHR11699 1 519 4.7E-174 T 13-09-2016 PMA3_RS15245 99e5b81259ba689420ff9eb0e980288b 526 PANTHER PTHR11699:SF10 1 519 4.7E-174 T 13-09-2016 PMA3_RS15245 99e5b81259ba689420ff9eb0e980288b 526 Gene3D G3DSA:3.40.309.10 267 454 2.7E-53 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS15245 99e5b81259ba689420ff9eb0e980288b 526 SUPERFAMILY SSF53720 23 518 5.24E-102 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS15245 99e5b81259ba689420ff9eb0e980288b 526 Pfam PF00171 Aldehyde dehydrogenase family 24 457 2.3E-47 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS02720 08d1008bf6f87d34625d8e9f5f8b51b7 109 Pfam PF08850 Domain of unknown function (DUF1820) 8 104 4.2E-43 T 13-09-2016 IPR014949 Protein of unknown function DUF1820 PMA3_RS02720 08d1008bf6f87d34625d8e9f5f8b51b7 109 PIRSF PIRSF028538 2 109 9.4E-51 T 13-09-2016 IPR014949 Protein of unknown function DUF1820 PMA3_RS03235 cdf559a590f2fd60bd10112f58842a85 180 SUPERFAMILY SSF54523 6 94 2.51E-13 T 13-09-2016 PMA3_RS03235 cdf559a590f2fd60bd10112f58842a85 180 Pfam PF12019 Type II transport protein GspH 41 154 9.8E-20 T 13-09-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PMA3_RS03235 cdf559a590f2fd60bd10112f58842a85 180 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS03235 cdf559a590f2fd60bd10112f58842a85 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.6E-6 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS19650 1283a124540016a822628589c352bb68 141 Gene3D G3DSA:3.40.630.30 12 138 1.8E-38 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19650 1283a124540016a822628589c352bb68 141 Pfam PF13673 Acetyltransferase (GNAT) domain 25 138 1.9E-22 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS19650 1283a124540016a822628589c352bb68 141 PANTHER PTHR13355:SF8 20 138 1.5E-30 T 13-09-2016 PMA3_RS19650 1283a124540016a822628589c352bb68 141 PANTHER PTHR13355 20 138 1.5E-30 T 13-09-2016 PMA3_RS19650 1283a124540016a822628589c352bb68 141 SUPERFAMILY SSF55729 4 139 1.03E-35 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS26740 deb3d00cefe652345fd468a7bbaa79d7 403 SUPERFAMILY SSF56349 104 387 1.84E-38 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS26740 deb3d00cefe652345fd468a7bbaa79d7 403 PANTHER PTHR30629 1 395 1.7E-57 T 13-09-2016 PMA3_RS26740 deb3d00cefe652345fd468a7bbaa79d7 403 Gene3D G3DSA:1.10.150.130 104 194 9.5E-8 T 13-09-2016 IPR023109 Integrase/recombinase, N-terminal PMA3_RS26740 deb3d00cefe652345fd468a7bbaa79d7 403 Gene3D G3DSA:1.10.443.10 220 385 1.5E-11 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS26740 deb3d00cefe652345fd468a7bbaa79d7 403 Pfam PF13356 Domain of unknown function (DUF4102) 5 83 2.0E-15 T 13-09-2016 IPR025166 Domain of unknown function DUF4102 PMA3_RS26740 deb3d00cefe652345fd468a7bbaa79d7 403 Pfam PF00589 Phage integrase family 220 375 3.4E-9 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS26740 deb3d00cefe652345fd468a7bbaa79d7 403 PANTHER PTHR30629:SF2 1 395 1.7E-57 T 13-09-2016 PMA3_RS21445 4106b0fa7e0aeaea2c4e8ef31101fa4a 199 PIRSF PIRSF020680 1 197 9.6E-58 T 13-09-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PMA3_RS21445 4106b0fa7e0aeaea2c4e8ef31101fa4a 199 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 10 190 2.3E-51 T 13-09-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PMA3_RS21445 4106b0fa7e0aeaea2c4e8ef31101fa4a 199 SUPERFAMILY SSF159709 16 191 7.59E-53 T 13-09-2016 PMA3_RS21445 4106b0fa7e0aeaea2c4e8ef31101fa4a 199 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 8 191 1.6E-55 T 13-09-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PMA3_RS07375 cc288a857a1639406a8c52519a4d48e8 204 PANTHER PTHR30086 3 194 6.2E-88 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS07375 cc288a857a1639406a8c52519a4d48e8 204 Pfam PF01810 LysE type translocator 17 192 5.9E-19 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS07375 cc288a857a1639406a8c52519a4d48e8 204 PANTHER PTHR30086:SF12 3 194 6.2E-88 T 13-09-2016 PMA3_RS03440 c9c13f18833501599aabb7b3e95a6173 288 PANTHER PTHR36151:SF3 1 288 1.1E-99 T 13-09-2016 PMA3_RS03440 c9c13f18833501599aabb7b3e95a6173 288 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 42 272 1.3E-55 T 13-09-2016 IPR018713 Domain of unknown function DUF2236 PMA3_RS03440 c9c13f18833501599aabb7b3e95a6173 288 PANTHER PTHR36151 1 288 1.1E-99 T 13-09-2016 PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 PANTHER PTHR32305 14 644 2.8E-67 T 13-09-2016 PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 566 644 3.5E-25 T 13-09-2016 IPR022385 Rhs repeat-associated core GO:0097264 PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 PANTHER PTHR32305:SF6 14 644 2.8E-67 T 13-09-2016 PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 213 250 2.0E-5 T 13-09-2016 IPR006530 YD repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 101 133 2.8E-5 T 13-09-2016 IPR006530 YD repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 59 96 4.1E-6 T 13-09-2016 IPR006530 YD repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 18 58 5.6E-5 T 13-09-2016 IPR006530 YD repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 80 120 1.5E-9 T 13-09-2016 IPR006530 YD repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 43 78 1.3E-5 T 13-09-2016 IPR006530 YD repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 233 264 8.2E-5 T 13-09-2016 IPR006530 YD repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 458 490 1.7E-7 T 13-09-2016 IPR006530 YD repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 150 185 0.0011 T 13-09-2016 IPR006530 YD repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 Pfam PF03527 RHS protein 540 573 2.3E-13 T 13-09-2016 IPR001826 RHS protein PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 Pfam PF05593 RHS Repeat 80 115 2.2E-8 T 13-09-2016 IPR031325 RHS repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 Pfam PF05593 RHS Repeat 43 73 4.7E-5 T 13-09-2016 IPR031325 RHS repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 Pfam PF05593 RHS Repeat 458 488 1.2E-5 T 13-09-2016 IPR031325 RHS repeat PMA3_RS01740 f4da239f452dac3c65a158dcbb91c5ef 648 Pfam PF05593 RHS Repeat 213 240 8.5E-5 T 13-09-2016 IPR031325 RHS repeat PMA3_RS16615 a4bd33f65d5007fbbb5b8eb1df25015b 105 SUPERFAMILY SSF69118 7 105 1.83E-21 T 13-09-2016 IPR029032 AhpD-like PMA3_RS16615 a4bd33f65d5007fbbb5b8eb1df25015b 105 Gene3D G3DSA:1.20.1290.10 9 105 1.5E-23 T 13-09-2016 IPR029032 AhpD-like PMA3_RS16615 a4bd33f65d5007fbbb5b8eb1df25015b 105 PANTHER PTHR33930 10 104 4.8E-25 T 13-09-2016 PMA3_RS16615 a4bd33f65d5007fbbb5b8eb1df25015b 105 Pfam PF02627 Carboxymuconolactone decarboxylase family 18 101 5.4E-16 T 13-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS16615 a4bd33f65d5007fbbb5b8eb1df25015b 105 PANTHER PTHR33930:SF2 10 104 4.8E-25 T 13-09-2016 PMA3_RS07845 568ad2bf4eab2b4cde2bd4c1aaf0970c 449 PANTHER PTHR11119:SF9 2 438 1.4E-169 T 13-09-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 PMA3_RS07845 568ad2bf4eab2b4cde2bd4c1aaf0970c 449 PIRSF PIRSF005353 14 449 6.9E-175 T 13-09-2016 IPR026033 Purine permease PbuG-like PMA3_RS07845 568ad2bf4eab2b4cde2bd4c1aaf0970c 449 Pfam PF00860 Permease family 38 411 1.1E-51 T 13-09-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS07845 568ad2bf4eab2b4cde2bd4c1aaf0970c 449 PANTHER PTHR11119 2 438 1.4E-169 T 13-09-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS29155 dd4850a21ad30f742d0dc7e91761de55 210 Pfam PF09335 SNARE associated Golgi protein 22 140 3.1E-17 T 13-09-2016 IPR032816 SNARE associated Golgi protein PMA3_RS29155 dd4850a21ad30f742d0dc7e91761de55 210 PANTHER PTHR30353:SF8 1 186 6.7E-84 T 13-09-2016 PMA3_RS29155 dd4850a21ad30f742d0dc7e91761de55 210 PANTHER PTHR30353 1 186 6.7E-84 T 13-09-2016 IPR032818 DedA family PMA3_RS11615 a34500b1716a0893f3a1095042f920ed 261 SUPERFAMILY SSF52096 8 260 9.8E-83 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS11615 a34500b1716a0893f3a1095042f920ed 261 Gene3D G3DSA:3.90.226.10 4 201 5.6E-66 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS11615 a34500b1716a0893f3a1095042f920ed 261 PANTHER PTHR11941 9 258 2.4E-97 T 13-09-2016 PMA3_RS11615 a34500b1716a0893f3a1095042f920ed 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 260 3.6E-71 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS11615 a34500b1716a0893f3a1095042f920ed 261 Gene3D G3DSA:1.10.12.10 205 260 1.3E-19 T 13-09-2016 IPR014748 Crontonase, C-terminal PMA3_RS11615 a34500b1716a0893f3a1095042f920ed 261 PANTHER PTHR11941:SF54 9 258 2.4E-97 T 13-09-2016 PMA3_RS27815 89324960b394c995fdea9721d68c7863 324 Hamap MF_01497 Stress response kinase A [srkA]. 1 317 48.814 T 13-09-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PMA3_RS27815 89324960b394c995fdea9721d68c7863 324 Gene3D G3DSA:3.90.1200.10 103 323 4.1E-48 T 13-09-2016 PMA3_RS27815 89324960b394c995fdea9721d68c7863 324 PANTHER PTHR39573:SF1 1 324 1.8E-174 T 13-09-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PMA3_RS27815 89324960b394c995fdea9721d68c7863 324 SUPERFAMILY SSF56112 1 322 6.27E-87 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS27815 89324960b394c995fdea9721d68c7863 324 PANTHER PTHR39573 1 324 1.8E-174 T 13-09-2016 PMA3_RS27815 89324960b394c995fdea9721d68c7863 324 Pfam PF01636 Phosphotransferase enzyme family 32 263 6.0E-36 T 13-09-2016 IPR002575 Aminoglycoside phosphotransferase PMA3_RS00755 f6a4120144a4ca2a165c7e0fffa21418 280 PANTHER PTHR30468 3 280 1.5E-96 T 13-09-2016 PMA3_RS00755 f6a4120144a4ca2a165c7e0fffa21418 280 PANTHER PTHR30468:SF2 3 280 1.5E-96 T 13-09-2016 PMA3_RS00755 f6a4120144a4ca2a165c7e0fffa21418 280 SUPERFAMILY SSF51197 4 279 1.51E-93 T 13-09-2016 PMA3_RS00755 f6a4120144a4ca2a165c7e0fffa21418 280 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 271 4.1E-66 T 13-09-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PMA3_RS00755 f6a4120144a4ca2a165c7e0fffa21418 280 Gene3D G3DSA:3.60.130.10 3 279 2.4E-95 T 13-09-2016 PMA3_RS16370 3265cbb1132bf8fbb092bef5f5ee2d88 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.4E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS16370 3265cbb1132bf8fbb092bef5f5ee2d88 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.4E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS16370 3265cbb1132bf8fbb092bef5f5ee2d88 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.4E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS16370 3265cbb1132bf8fbb092bef5f5ee2d88 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.4E-17 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS16370 3265cbb1132bf8fbb092bef5f5ee2d88 247 Gene3D G3DSA:3.40.50.720 2 246 2.1E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS16370 3265cbb1132bf8fbb092bef5f5ee2d88 247 SUPERFAMILY SSF51735 4 246 2.16E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS16370 3265cbb1132bf8fbb092bef5f5ee2d88 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 245 2.4E-34 T 13-09-2016 PMA3_RS16370 3265cbb1132bf8fbb092bef5f5ee2d88 247 PANTHER PTHR24322 12 132 3.3E-31 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS16370 3265cbb1132bf8fbb092bef5f5ee2d88 247 PANTHER PTHR24322 148 180 3.3E-31 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS24335 3a9bee0c3773b2028c2bb97bfb58f76a 459 PIRSF PIRSF034888 1 453 3.4E-51 T 13-09-2016 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 PMA3_RS24335 3a9bee0c3773b2028c2bb97bfb58f76a 459 Pfam PF13175 AAA ATPase domain 281 386 5.3E-15 T 13-09-2016 PMA3_RS24335 3a9bee0c3773b2028c2bb97bfb58f76a 459 Gene3D G3DSA:3.40.50.300 124 141 8.1E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24335 3a9bee0c3773b2028c2bb97bfb58f76a 459 Gene3D G3DSA:3.40.50.300 179 393 8.1E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24335 3a9bee0c3773b2028c2bb97bfb58f76a 459 Gene3D G3DSA:3.40.50.300 2 58 8.1E-16 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24335 3a9bee0c3773b2028c2bb97bfb58f76a 459 SUPERFAMILY SSF52540 196 227 2.45E-8 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24335 3a9bee0c3773b2028c2bb97bfb58f76a 459 SUPERFAMILY SSF52540 289 393 2.45E-8 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24335 3a9bee0c3773b2028c2bb97bfb58f76a 459 SUPERFAMILY SSF52540 2 86 2.45E-8 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24335 3a9bee0c3773b2028c2bb97bfb58f76a 459 Pfam PF12476 Protein of unknown function (DUF3696) 398 443 3.4E-10 T 13-09-2016 IPR022532 Domain of unknown function DUF3696, C-terminal PMA3_RS00590 9b25c998c6185e5ad9a35f2de140aa2c 172 PANTHER PTHR28026 1 170 7.7E-55 T 13-09-2016 PMA3_RS00590 9b25c998c6185e5ad9a35f2de140aa2c 172 Pfam PF06127 Protein of unknown function (DUF962) 1 144 1.0E-25 T 13-09-2016 IPR009305 Protein of unknown function DUF962 PMA3_RS00590 9b25c998c6185e5ad9a35f2de140aa2c 172 PANTHER PTHR28026:SF3 1 170 7.7E-55 T 13-09-2016 PMA3_RS09070 d7e558cf0c5e38aede7708f0196e7577 224 Pfam PF05036 Sporulation related domain 149 218 1.9E-16 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS09070 d7e558cf0c5e38aede7708f0196e7577 224 PANTHER PTHR38687 5 224 2.6E-35 T 13-09-2016 PMA3_RS09070 d7e558cf0c5e38aede7708f0196e7577 224 Gene3D G3DSA:3.30.70.1070 148 221 2.5E-21 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS09070 d7e558cf0c5e38aede7708f0196e7577 224 SUPERFAMILY SSF110997 149 220 8.5E-17 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS09070 d7e558cf0c5e38aede7708f0196e7577 224 PANTHER PTHR38687:SF1 5 224 2.6E-35 T 13-09-2016 PMA3_RS10540 1583f2117885b081f4fa32d0a2897f50 167 PIRSF PIRSF028301 1 167 3.8E-57 T 13-09-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PMA3_RS10540 1583f2117885b081f4fa32d0a2897f50 167 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 158 2.5E-56 T 13-09-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PMA3_RS10540 1583f2117885b081f4fa32d0a2897f50 167 PANTHER PTHR35850 1 167 2.4E-81 T 13-09-2016 PMA3_RS10540 1583f2117885b081f4fa32d0a2897f50 167 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 159 1.8E-54 T 13-09-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PMA3_RS10540 1583f2117885b081f4fa32d0a2897f50 167 PANTHER PTHR35850:SF2 1 167 2.4E-81 T 13-09-2016 PMA3_RS18110 15406de2d4318eccb0a474287d832fbb 406 PANTHER PTHR10909 18 406 1.5E-28 T 13-09-2016 PMA3_RS18110 15406de2d4318eccb0a474287d832fbb 406 Gene3D G3DSA:1.10.540.10 5 121 8.0E-30 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18110 15406de2d4318eccb0a474287d832fbb 406 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 245 374 5.0E-20 T 13-09-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS18110 15406de2d4318eccb0a474287d832fbb 406 SUPERFAMILY SSF56645 19 216 2.69E-23 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS18110 15406de2d4318eccb0a474287d832fbb 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 97 1.8E-5 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18110 15406de2d4318eccb0a474287d832fbb 406 PANTHER PTHR10909:SF316 18 406 1.5E-28 T 13-09-2016 PMA3_RS18110 15406de2d4318eccb0a474287d832fbb 406 SUPERFAMILY SSF47203 240 373 1.19E-6 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18110 15406de2d4318eccb0a474287d832fbb 406 Gene3D G3DSA:2.40.110.10 128 211 1.1E-17 T 13-09-2016 PMA3_RS18110 15406de2d4318eccb0a474287d832fbb 406 Gene3D G3DSA:1.20.140.10 212 395 2.1E-29 T 13-09-2016 PMA3_RS18110 15406de2d4318eccb0a474287d832fbb 406 PIRSF PIRSF016578 6 396 7.0E-95 T 13-09-2016 PMA3_RS03780 46cf7276511affa3ba12f28ef61249c0 251 Pfam PF00899 ThiF family 10 243 2.7E-60 T 13-09-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PMA3_RS03780 46cf7276511affa3ba12f28ef61249c0 251 SUPERFAMILY SSF69572 2 247 1.31E-85 T 13-09-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PMA3_RS03780 46cf7276511affa3ba12f28ef61249c0 251 PANTHER PTHR10953 2 247 5.9E-95 T 13-09-2016 PMA3_RS03780 46cf7276511affa3ba12f28ef61249c0 251 Gene3D G3DSA:3.40.50.720 3 247 2.9E-72 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS03780 46cf7276511affa3ba12f28ef61249c0 251 PANTHER PTHR10953:SF158 2 247 5.9E-95 T 13-09-2016 PMA3_RS16855 db810391e8d19beda30dcdebc3bed7db 522 Gene3D G3DSA:3.40.309.10 274 453 4.8E-45 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS16855 db810391e8d19beda30dcdebc3bed7db 522 SUPERFAMILY SSF53720 18 506 2.36E-95 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS16855 db810391e8d19beda30dcdebc3bed7db 522 PANTHER PTHR11699:SF10 7 520 1.2E-104 T 13-09-2016 PMA3_RS16855 db810391e8d19beda30dcdebc3bed7db 522 Pfam PF00171 Aldehyde dehydrogenase family 17 460 2.3E-50 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16855 db810391e8d19beda30dcdebc3bed7db 522 Gene3D G3DSA:3.40.605.10 6 273 8.9E-51 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS16855 db810391e8d19beda30dcdebc3bed7db 522 PANTHER PTHR11699 7 520 1.2E-104 T 13-09-2016 PMA3_RS21140 540e6d8cd73918e24e204693ad27929e 217 SUPERFAMILY SSF53335 8 217 2.79E-51 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS21140 540e6d8cd73918e24e204693ad27929e 217 Gene3D G3DSA:3.40.50.150 6 217 6.0E-78 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS21140 540e6d8cd73918e24e204693ad27929e 217 PANTHER PTHR10509 1 217 1.8E-92 T 13-09-2016 PMA3_RS21140 540e6d8cd73918e24e204693ad27929e 217 PANTHER PTHR10509:SF14 1 217 1.8E-92 T 13-09-2016 PMA3_RS21140 540e6d8cd73918e24e204693ad27929e 217 Pfam PF01596 O-methyltransferase 22 216 7.9E-68 T 13-09-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 PMA3_RS26130 14de31c88f52b2f24a245aa9b7536246 222 PANTHER PTHR33254 2 222 4.0E-23 T 13-09-2016 PMA3_RS26130 14de31c88f52b2f24a245aa9b7536246 222 Pfam PF03737 Demethylmenaquinone methyltransferase 15 170 3.3E-27 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS26130 14de31c88f52b2f24a245aa9b7536246 222 SUPERFAMILY SSF89562 13 182 4.45E-32 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS26130 14de31c88f52b2f24a245aa9b7536246 222 PANTHER PTHR33254:SF5 2 222 4.0E-23 T 13-09-2016 PMA3_RS26130 14de31c88f52b2f24a245aa9b7536246 222 Gene3D G3DSA:3.50.30.40 12 180 1.7E-36 T 13-09-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PMA3_RS21760 0262c9df7d60dd9dee10bf1da53eeb09 130 SUPERFAMILY SSF101116 9 126 3.14E-33 T 13-09-2016 IPR003713 Flagellar protein FliS GO:0044780 PMA3_RS21760 0262c9df7d60dd9dee10bf1da53eeb09 130 Pfam PF02561 Flagellar protein FliS 8 126 1.9E-32 T 13-09-2016 IPR003713 Flagellar protein FliS GO:0044780 PMA3_RS21760 0262c9df7d60dd9dee10bf1da53eeb09 130 TIGRFAM TIGR00208 fliS: flagellar protein FliS 6 125 1.5E-23 T 13-09-2016 IPR003713 Flagellar protein FliS GO:0044780 PMA3_RS21760 0262c9df7d60dd9dee10bf1da53eeb09 130 PIRSF PIRSF039090 1 130 4.5E-40 T 13-09-2016 IPR003713 Flagellar protein FliS GO:0044780 PMA3_RS21760 0262c9df7d60dd9dee10bf1da53eeb09 130 PANTHER PTHR34773 1 126 2.4E-30 T 13-09-2016 PMA3_RS21760 0262c9df7d60dd9dee10bf1da53eeb09 130 Gene3D G3DSA:1.20.120.340 8 127 6.8E-33 T 13-09-2016 IPR003713 Flagellar protein FliS GO:0044780 PMA3_RS03350 9a01d9ad70b8d46ce542246cd30bcd1b 208 Gene3D G3DSA:3.40.1540.10 1 208 5.9E-133 T 13-09-2016 IPR014796 Protein of unknown function DUF1780, putative endonuclease PMA3_RS03350 9a01d9ad70b8d46ce542246cd30bcd1b 208 Pfam PF08682 Putative endonuclease, protein of unknown function (DUF1780) 2 208 4.2E-125 T 13-09-2016 IPR014796 Protein of unknown function DUF1780, putative endonuclease PMA3_RS03350 9a01d9ad70b8d46ce542246cd30bcd1b 208 SUPERFAMILY SSF52980 1 208 1.55E-116 T 13-09-2016 IPR011335 Restriction endonuclease type II-like PMA3_RS15500 7d4076607199a28171a8e099a10e7524 287 PANTHER PTHR31964 117 287 3.8E-44 T 13-09-2016 PMA3_RS15500 7d4076607199a28171a8e099a10e7524 287 Gene3D G3DSA:3.40.50.620 2 117 5.9E-10 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS15500 7d4076607199a28171a8e099a10e7524 287 SUPERFAMILY SSF52402 134 280 2.76E-15 T 13-09-2016 PMA3_RS15500 7d4076607199a28171a8e099a10e7524 287 SUPERFAMILY SSF52402 2 124 8.37E-16 T 13-09-2016 PMA3_RS15500 7d4076607199a28171a8e099a10e7524 287 PANTHER PTHR31964:SF41 117 287 3.8E-44 T 13-09-2016 PMA3_RS15500 7d4076607199a28171a8e099a10e7524 287 Gene3D G3DSA:3.40.50.620 118 272 3.9E-16 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS15500 7d4076607199a28171a8e099a10e7524 287 Pfam PF00582 Universal stress protein family 155 272 2.6E-12 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS26965 c6395bd8404244b6b4376184c0508399 154 PANTHER PTHR30455:SF2 2 150 4.8E-70 T 13-09-2016 PMA3_RS26965 c6395bd8404244b6b4376184c0508399 154 PANTHER PTHR30455 2 150 4.8E-70 T 13-09-2016 PMA3_RS26965 c6395bd8404244b6b4376184c0508399 154 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.3E-70 T 13-09-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PMA3_RS26965 c6395bd8404244b6b4376184c0508399 154 Pfam PF03477 ATP cone domain 52 136 6.5E-13 T 13-09-2016 IPR005144 ATP-cone domain PMA3_RS26965 c6395bd8404244b6b4376184c0508399 154 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 88.324 T 13-09-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PMA3_RS01380 f9dad561adb75c1e9a627e2efaf20171 534 PANTHER PTHR10566:SF79 6 444 2.5E-256 T 13-09-2016 PMA3_RS01380 f9dad561adb75c1e9a627e2efaf20171 534 Gene3D G3DSA:3.90.1200.10 248 297 9.1E-5 T 13-09-2016 PMA3_RS01380 f9dad561adb75c1e9a627e2efaf20171 534 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 534 52.052 T 13-09-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 PMA3_RS01380 f9dad561adb75c1e9a627e2efaf20171 534 Pfam PF03109 ABC1 family 113 232 1.2E-35 T 13-09-2016 IPR004147 UbiB domain PMA3_RS01380 f9dad561adb75c1e9a627e2efaf20171 534 PANTHER PTHR10566 6 444 2.5E-256 T 13-09-2016 PMA3_RS01380 f9dad561adb75c1e9a627e2efaf20171 534 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 446 2.7E-175 T 13-09-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 PMA3_RS01380 f9dad561adb75c1e9a627e2efaf20171 534 SUPERFAMILY SSF56112 96 159 1.19E-47 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS01380 f9dad561adb75c1e9a627e2efaf20171 534 SUPERFAMILY SSF56112 194 437 1.19E-47 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS01880 231491d00252a384f9474f8e285131e1 270 PRINTS PR00069 Aldo-keto reductase signature 119 137 1.1E-5 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS01880 231491d00252a384f9474f8e285131e1 270 PRINTS PR00069 Aldo-keto reductase signature 57 81 1.1E-5 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS01880 231491d00252a384f9474f8e285131e1 270 PRINTS PR00069 Aldo-keto reductase signature 153 170 1.1E-5 T 13-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PMA3_RS01880 231491d00252a384f9474f8e285131e1 270 PANTHER PTHR11732 10 263 5.2E-55 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS01880 231491d00252a384f9474f8e285131e1 270 Gene3D G3DSA:3.20.20.100 11 261 1.2E-43 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS01880 231491d00252a384f9474f8e285131e1 270 Pfam PF00248 Aldo/keto reductase family 22 219 7.3E-33 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS01880 231491d00252a384f9474f8e285131e1 270 SUPERFAMILY SSF51430 10 264 3.4E-50 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS01880 231491d00252a384f9474f8e285131e1 270 PANTHER PTHR11732:SF14 10 263 5.2E-55 T 13-09-2016 PMA3_RS00905 6ae7326d0d43906ec4481cb29a1acce0 151 SUPERFAMILY SSF54637 2 150 7.46E-36 T 13-09-2016 IPR029069 HotDog domain PMA3_RS00905 6ae7326d0d43906ec4481cb29a1acce0 151 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 12 150 4.6E-50 T 13-09-2016 IPR012660 Thioesterase, putative PMA3_RS00905 6ae7326d0d43906ec4481cb29a1acce0 151 Gene3D G3DSA:3.10.129.10 3 150 2.1E-53 T 13-09-2016 IPR029069 HotDog domain PMA3_RS00905 6ae7326d0d43906ec4481cb29a1acce0 151 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 6 150 1.2E-49 T 13-09-2016 IPR012660 Thioesterase, putative PMA3_RS12230 5feca332e9138df20dd4e126685ef5bf 361 Gene3D G3DSA:3.40.50.2300 150 298 8.4E-23 T 13-09-2016 PMA3_RS12230 5feca332e9138df20dd4e126685ef5bf 361 SUPERFAMILY SSF53822 32 298 3.43E-37 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS12230 5feca332e9138df20dd4e126685ef5bf 361 PANTHER PTHR32196:SF20 182 347 9.7E-12 T 13-09-2016 PMA3_RS12230 5feca332e9138df20dd4e126685ef5bf 361 Pfam PF13407 Periplasmic binding protein domain 27 278 2.4E-17 T 13-09-2016 IPR025997 Periplasmic binding protein PMA3_RS12230 5feca332e9138df20dd4e126685ef5bf 361 PANTHER PTHR32196 182 347 9.7E-12 T 13-09-2016 PMA3_RS12230 5feca332e9138df20dd4e126685ef5bf 361 Gene3D G3DSA:3.40.50.2300 30 149 3.5E-6 T 13-09-2016 PMA3_RS30210 aa2c9d50665f4998e32b37f6ed38fe84 522 PANTHER PTHR11814:SF71 9 515 1.6E-158 T 13-09-2016 PMA3_RS30210 aa2c9d50665f4998e32b37f6ed38fe84 522 Gene3D G3DSA:3.30.750.24 429 510 1.6E-10 T 13-09-2016 IPR002645 STAS domain PMA3_RS30210 aa2c9d50665f4998e32b37f6ed38fe84 522 Pfam PF00916 Sulfate permease family 27 392 1.1E-81 T 13-09-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PMA3_RS30210 aa2c9d50665f4998e32b37f6ed38fe84 522 PANTHER PTHR11814 9 515 1.6E-158 T 13-09-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PMA3_RS30210 aa2c9d50665f4998e32b37f6ed38fe84 522 Pfam PF01740 STAS domain 435 513 1.1E-7 T 13-09-2016 IPR002645 STAS domain PMA3_RS30210 aa2c9d50665f4998e32b37f6ed38fe84 522 SUPERFAMILY SSF52091 425 512 1.0E-12 T 13-09-2016 IPR002645 STAS domain PMA3_RS22805 14a219fc259aee9872dc343b7b426437 101 Pfam PF13467 Ribbon-helix-helix domain 16 83 1.6E-24 T 13-09-2016 IPR027373 Ribbon-helix-helix domain PMA3_RS19775 75d0cb6ebc83e3e25420eb37057a3183 580 Gene3D G3DSA:3.40.190.10 87 205 1.1E-12 T 13-09-2016 PMA3_RS19775 75d0cb6ebc83e3e25420eb37057a3183 580 SUPERFAMILY SSF53850 74 520 4.79E-60 T 13-09-2016 PMA3_RS19775 75d0cb6ebc83e3e25420eb37057a3183 580 Pfam PF13416 Bacterial extracellular solute-binding protein 90 441 2.7E-9 T 13-09-2016 PMA3_RS19775 75d0cb6ebc83e3e25420eb37057a3183 580 Gene3D G3DSA:3.40.190.10 206 449 8.3E-42 T 13-09-2016 PMA3_RS19775 75d0cb6ebc83e3e25420eb37057a3183 580 PIRSF PIRSF035859 1 580 0.0 T 13-09-2016 IPR014597 ABC transporter, periplasmic substrate-binding protein GO:0005215 PMA3_RS19775 75d0cb6ebc83e3e25420eb37057a3183 580 PANTHER PTHR30061 90 541 3.8E-17 T 13-09-2016 PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 Pfam PF12833 Helix-turn-helix domain 221 296 6.2E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 Gene3D G3DSA:1.10.10.60 252 296 1.7E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 PANTHER PTHR11019:SF90 5 24 4.8E-34 T 13-09-2016 PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 PANTHER PTHR11019:SF90 50 306 4.8E-34 T 13-09-2016 PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 Gene3D G3DSA:3.40.50.880 2 182 3.2E-17 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 SUPERFAMILY SSF52317 2 182 1.92E-21 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 SMART SM00342 215 298 6.3E-25 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 SUPERFAMILY SSF46689 199 248 1.17E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 PANTHER PTHR11019 5 24 4.8E-34 T 13-09-2016 PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 PANTHER PTHR11019 50 306 4.8E-34 T 13-09-2016 PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 Gene3D G3DSA:1.10.10.60 195 251 2.5E-15 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS12800 307689ac939ba19254634e6f80a9d2b4 332 SUPERFAMILY SSF46689 251 296 8.51E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 Gene3D G3DSA:1.10.10.10 2 89 5.3E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 SUPERFAMILY SSF53850 93 295 2.9E-34 T 13-09-2016 PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 PANTHER PTHR30118 1 298 1.4E-108 T 13-09-2016 PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.2E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.2E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.2E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 SUPERFAMILY SSF46785 7 88 5.17E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 Pfam PF03466 LysR substrate binding domain 101 294 1.6E-18 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 1.1E-15 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 Gene3D G3DSA:3.40.190.10 183 268 1.2E-24 T 13-09-2016 PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 Gene3D G3DSA:3.40.190.10 93 176 5.2E-22 T 13-09-2016 PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 Gene3D G3DSA:3.40.190.10 273 300 5.2E-22 T 13-09-2016 PMA3_RS13635 9f2148bfa76c0bd6b6ce110be3035f1b 304 PANTHER PTHR30118:SF8 1 298 1.4E-108 T 13-09-2016 PMA3_RS12145 2f02ccf8faffae4ef3737ff40d51eb17 120 PANTHER PTHR33745 1 120 1.9E-44 T 13-09-2016 PMA3_RS12145 2f02ccf8faffae4ef3737ff40d51eb17 120 SUPERFAMILY SSF52091 1 113 2.94E-16 T 13-09-2016 IPR002645 STAS domain PMA3_RS12145 2f02ccf8faffae4ef3737ff40d51eb17 120 Gene3D G3DSA:3.30.750.24 4 96 1.4E-9 T 13-09-2016 IPR002645 STAS domain PMA3_RS24905 5fdc3324fe996fd9758a296f68710156 98 SUPERFAMILY SSF158757 1 77 2.75E-38 T 13-09-2016 IPR023163 SMc04008-like domain PMA3_RS24905 5fdc3324fe996fd9758a296f68710156 98 Gene3D G3DSA:1.10.3340.10 1 83 6.7E-44 T 13-09-2016 IPR023163 SMc04008-like domain PMA3_RS24905 5fdc3324fe996fd9758a296f68710156 98 Pfam PF06844 Protein of unknown function (DUF1244) 27 92 2.2E-36 T 13-09-2016 IPR023163 SMc04008-like domain PMA3_RS18210 fc6236beeb9ce185d1abb6c9ede611e2 219 PANTHER PTHR10285 21 207 3.8E-46 T 13-09-2016 PMA3_RS18210 fc6236beeb9ce185d1abb6c9ede611e2 219 SUPERFAMILY SSF52540 12 185 2.1E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18210 fc6236beeb9ce185d1abb6c9ede611e2 219 Gene3D G3DSA:3.40.50.300 16 210 2.5E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18210 fc6236beeb9ce185d1abb6c9ede611e2 219 Pfam PF13238 AAA domain 27 173 6.7E-7 T 13-09-2016 PMA3_RS18210 fc6236beeb9ce185d1abb6c9ede611e2 219 PANTHER PTHR10285:SF81 21 207 3.8E-46 T 13-09-2016 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 PANTHER PTHR20854 1 254 6.9E-74 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 PANTHER PTHR20854:SF5 1 254 6.9E-74 T 13-09-2016 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 1.5E-10 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 1.5E-10 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 1.5E-10 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 1.5E-10 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 13-09-2016 IPR020583 Inositol monophosphatase, metal-binding site PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 Pfam PF00459 Inositol monophosphatase family 9 254 1.7E-49 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 Gene3D G3DSA:3.40.190.80 162 260 8.8E-40 T 13-09-2016 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 Gene3D G3DSA:3.30.540.10 6 161 2.2E-41 T 13-09-2016 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 SUPERFAMILY SSF56655 5 272 2.75E-73 T 13-09-2016 PMA3_RS00900 b800f41953c9c94c214dd65b6d6dd11a 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 258 2.9E-84 T 13-09-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 PMA3_RS05575 6180adc0e69bd1d9126dcdec5f0e6bf7 416 SUPERFAMILY SSF47240 62 389 1.7E-96 T 13-09-2016 IPR009078 Ferritin-like superfamily PMA3_RS05575 6180adc0e69bd1d9126dcdec5f0e6bf7 416 Gene3D G3DSA:1.10.620.20 84 390 6.8E-109 T 13-09-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 PMA3_RS05575 6180adc0e69bd1d9126dcdec5f0e6bf7 416 Pfam PF00268 Ribonucleotide reductase, small chain 96 383 3.5E-83 T 13-09-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 PMA3_RS05575 6180adc0e69bd1d9126dcdec5f0e6bf7 416 PANTHER PTHR23409 20 411 1.2E-186 T 13-09-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 PMA3_RS05575 6180adc0e69bd1d9126dcdec5f0e6bf7 416 PANTHER PTHR23409:SF18 20 411 1.2E-186 T 13-09-2016 PMA3_RS05575 6180adc0e69bd1d9126dcdec5f0e6bf7 416 PIRSF PIRSF000355 65 416 1.7E-142 T 13-09-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 PMA3_RS08850 effc9a98c8c95899bdbc77a3f5d66b97 263 SMART SM01007 29 210 2.9E-42 T 13-09-2016 IPR001303 Class II aldolase/adducin N-terminal PMA3_RS08850 effc9a98c8c95899bdbc77a3f5d66b97 263 Gene3D G3DSA:3.40.225.10 27 235 6.2E-53 T 13-09-2016 IPR001303 Class II aldolase/adducin N-terminal PMA3_RS08850 effc9a98c8c95899bdbc77a3f5d66b97 263 PANTHER PTHR10672:SF17 26 235 9.8E-70 T 13-09-2016 PMA3_RS08850 effc9a98c8c95899bdbc77a3f5d66b97 263 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 30 210 2.7E-39 T 13-09-2016 IPR001303 Class II aldolase/adducin N-terminal PMA3_RS08850 effc9a98c8c95899bdbc77a3f5d66b97 263 PANTHER PTHR10672 26 235 9.8E-70 T 13-09-2016 PMA3_RS08850 effc9a98c8c95899bdbc77a3f5d66b97 263 SUPERFAMILY SSF53639 23 237 3.73E-55 T 13-09-2016 IPR001303 Class II aldolase/adducin N-terminal PMA3_RS29870 ab43360eea40e80fa8e088e12518b1fb 160 SUPERFAMILY SSF54637 3 155 8.75E-46 T 13-09-2016 IPR029069 HotDog domain PMA3_RS29870 ab43360eea40e80fa8e088e12518b1fb 160 PANTHER PTHR11049 7 157 5.2E-71 T 13-09-2016 PMA3_RS29870 ab43360eea40e80fa8e088e12518b1fb 160 Gene3D G3DSA:3.10.129.10 6 155 2.4E-56 T 13-09-2016 IPR029069 HotDog domain PMA3_RS29870 ab43360eea40e80fa8e088e12518b1fb 160 Pfam PF03061 Thioesterase superfamily 23 96 1.2E-18 T 13-09-2016 IPR006683 Thioesterase domain PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 ProSitePatterns PS00543 HlyD family secretion proteins signature. 420 442 - T 13-09-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PANTHER PTHR30386 1 128 2.4E-105 T 13-09-2016 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PANTHER PTHR30386 165 456 2.4E-105 T 13-09-2016 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 Gene3D G3DSA:2.40.50.100 303 337 1.0E-15 T 13-09-2016 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 Gene3D G3DSA:2.40.50.100 76 107 1.0E-15 T 13-09-2016 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 318 339 6.7E-50 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 435 455 6.7E-50 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 435 6.7E-50 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 375 398 6.7E-50 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 85 105 6.7E-50 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 351 375 6.7E-50 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 43 66 6.7E-50 T 13-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 35 456 4.3E-108 T 13-09-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PANTHER PTHR30386:SF3 1 128 2.4E-105 T 13-09-2016 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 PANTHER PTHR30386:SF3 165 456 2.4E-105 T 13-09-2016 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 Pfam PF13437 HlyD family secretion protein 306 404 2.2E-13 T 13-09-2016 PMA3_RS14410 44e245eafb021e37bf66f477d74164a5 456 Pfam PF13533 Biotin-lipoyl like 77 116 3.3E-7 T 13-09-2016 PMA3_RS26820 ef83d59cc4ce6aa4b9d13e6b4330a8c7 246 Pfam PF13276 HTH-like domain 4 60 7.1E-11 T 13-09-2016 IPR025948 HTH-like domain PMA3_RS26820 ef83d59cc4ce6aa4b9d13e6b4330a8c7 246 Pfam PF00665 Integrase core domain 81 197 1.8E-22 T 13-09-2016 IPR001584 Integrase, catalytic core GO:0015074 PMA3_RS26820 ef83d59cc4ce6aa4b9d13e6b4330a8c7 246 Gene3D G3DSA:3.30.420.10 74 236 3.1E-27 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS26820 ef83d59cc4ce6aa4b9d13e6b4330a8c7 246 SUPERFAMILY SSF53098 77 240 1.11E-28 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS26820 ef83d59cc4ce6aa4b9d13e6b4330a8c7 246 PANTHER PTHR32552 3 243 2.8E-12 T 13-09-2016 PMA3_RS29580 9bd992ac40ecb56623b88e8c80312d05 285 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 210 3.1E-11 T 13-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PMA3_RS29580 9bd992ac40ecb56623b88e8c80312d05 285 Gene3D G3DSA:3.40.50.720 2 207 2.0E-24 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS29580 9bd992ac40ecb56623b88e8c80312d05 285 PANTHER PTHR10366 5 282 3.2E-45 T 13-09-2016 PMA3_RS29580 9bd992ac40ecb56623b88e8c80312d05 285 PANTHER PTHR10366:SF430 5 282 3.2E-45 T 13-09-2016 PMA3_RS29580 9bd992ac40ecb56623b88e8c80312d05 285 SUPERFAMILY SSF51735 5 282 2.46E-38 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS01925 b6e5e8dfe7c92a2952dbb55a41e3795b 205 Pfam PF00293 NUDIX domain 52 172 1.0E-14 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS01925 b6e5e8dfe7c92a2952dbb55a41e3795b 205 Gene3D G3DSA:3.90.79.10 12 197 5.7E-56 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS01925 b6e5e8dfe7c92a2952dbb55a41e3795b 205 PANTHER PTHR11839:SF5 12 204 6.8E-91 T 13-09-2016 PMA3_RS01925 b6e5e8dfe7c92a2952dbb55a41e3795b 205 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 12 195 5.4E-52 T 13-09-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 PMA3_RS01925 b6e5e8dfe7c92a2952dbb55a41e3795b 205 PANTHER PTHR11839 12 204 6.8E-91 T 13-09-2016 PMA3_RS01925 b6e5e8dfe7c92a2952dbb55a41e3795b 205 ProSitePatterns PS00893 Nudix box signature. 93 114 - T 13-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PMA3_RS01925 b6e5e8dfe7c92a2952dbb55a41e3795b 205 SUPERFAMILY SSF55811 17 197 2.03E-46 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS23895 785d91cccbab69780dd7a57ccfdbd312 212 PANTHER PTHR30086 2 212 6.5E-82 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS23895 785d91cccbab69780dd7a57ccfdbd312 212 PIRSF PIRSF006324 1 209 2.4E-51 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS23895 785d91cccbab69780dd7a57ccfdbd312 212 Pfam PF01810 LysE type translocator 16 207 5.6E-35 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS23895 785d91cccbab69780dd7a57ccfdbd312 212 PANTHER PTHR30086:SF7 2 212 6.5E-82 T 13-09-2016 PMA3_RS04325 78b81dc7d07c77f935ebe134e5e08e94 93 PANTHER PTHR33175 2 92 1.7E-29 T 13-09-2016 PMA3_RS04325 78b81dc7d07c77f935ebe134e5e08e94 93 Pfam PF00216 Bacterial DNA-binding protein 3 92 4.4E-25 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS04325 78b81dc7d07c77f935ebe134e5e08e94 93 Gene3D G3DSA:4.10.520.10 2 93 4.6E-27 T 13-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PMA3_RS04325 78b81dc7d07c77f935ebe134e5e08e94 93 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 9.7E-8 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS04325 78b81dc7d07c77f935ebe134e5e08e94 93 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 9.7E-8 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS04325 78b81dc7d07c77f935ebe134e5e08e94 93 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 9.7E-8 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS04325 78b81dc7d07c77f935ebe134e5e08e94 93 SUPERFAMILY SSF47729 3 92 8.1E-25 T 13-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PMA3_RS04325 78b81dc7d07c77f935ebe134e5e08e94 93 SMART SM00411 3 92 2.1E-26 T 13-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PMA3_RS28620 f52e4b926837b4c55e22a400db570112 531 Gene3D G3DSA:3.50.50.60 193 297 4.4E-71 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28620 f52e4b926837b4c55e22a400db570112 531 Gene3D G3DSA:3.50.50.60 459 527 4.4E-71 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28620 f52e4b926837b4c55e22a400db570112 531 Gene3D G3DSA:3.50.50.60 30 148 4.4E-71 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28620 f52e4b926837b4c55e22a400db570112 531 Gene3D G3DSA:3.50.50.60 399 412 4.4E-71 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28620 f52e4b926837b4c55e22a400db570112 531 PANTHER PTHR11552 7 530 1.6E-158 T 13-09-2016 PMA3_RS28620 f52e4b926837b4c55e22a400db570112 531 Pfam PF00732 GMC oxidoreductase 35 297 2.7E-51 T 13-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PMA3_RS28620 f52e4b926837b4c55e22a400db570112 531 SUPERFAMILY SSF51905 18 295 1.17E-56 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28620 f52e4b926837b4c55e22a400db570112 531 SUPERFAMILY SSF51905 465 527 1.17E-56 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS28620 f52e4b926837b4c55e22a400db570112 531 PANTHER PTHR11552:SF92 7 530 1.6E-158 T 13-09-2016 PMA3_RS28620 f52e4b926837b4c55e22a400db570112 531 Pfam PF05199 GMC oxidoreductase 386 518 2.7E-20 T 13-09-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 SUPERFAMILY SSF63411 7 214 9.95E-23 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 SUPERFAMILY SSF63411 251 401 1.73E-13 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 PANTHER PTHR11851 414 800 2.8E-30 T 13-09-2016 PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 Pfam PF05193 Peptidase M16 inactive domain 164 334 2.7E-12 T 13-09-2016 IPR007863 Peptidase M16, C-terminal PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 Pfam PF05193 Peptidase M16 inactive domain 563 734 4.5E-14 T 13-09-2016 IPR007863 Peptidase M16, C-terminal PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 Gene3D G3DSA:3.30.830.10 9 219 1.4E-21 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 Gene3D G3DSA:3.30.830.10 413 611 1.5E-25 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 SUPERFAMILY SSF63411 622 803 2.1E-19 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 SUPERFAMILY SSF63411 410 609 1.4E-24 T 13-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 Gene3D G3DSA:3.30.830.10 623 803 6.5E-13 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28585 c5278ed529990b0c9340de8a83ba5d76 808 Gene3D G3DSA:3.30.830.10 293 397 4.5E-9 T 13-09-2016 IPR011237 Peptidase M16 domain GO:0046872 PMA3_RS28940 c89f9b556e903ffbfba7ba56a4c5127c 197 PANTHER PTHR30543 1 193 2.6E-44 T 13-09-2016 PMA3_RS28940 c89f9b556e903ffbfba7ba56a4c5127c 197 Pfam PF03358 NADPH-dependent FMN reductase 1 142 3.2E-34 T 13-09-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PMA3_RS28940 c89f9b556e903ffbfba7ba56a4c5127c 197 PANTHER PTHR30543:SF1 1 193 2.6E-44 T 13-09-2016 PMA3_RS28940 c89f9b556e903ffbfba7ba56a4c5127c 197 SUPERFAMILY SSF52218 1 166 4.97E-32 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS28940 c89f9b556e903ffbfba7ba56a4c5127c 197 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 3 171 5.0E-73 T 13-09-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 PMA3_RS28940 c89f9b556e903ffbfba7ba56a4c5127c 197 Gene3D G3DSA:3.40.50.360 3 172 2.3E-32 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS21575 b04e366bda73ea145c504ef6c02acbbc 297 Gene3D G3DSA:3.30.1330.60 119 243 5.0E-29 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS21575 b04e366bda73ea145c504ef6c02acbbc 297 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 54 5.0E-20 T 13-09-2016 IPR025713 Motility protein B, N-terminal domain PMA3_RS21575 b04e366bda73ea145c504ef6c02acbbc 297 SUPERFAMILY SSF103088 131 243 3.53E-29 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS21575 b04e366bda73ea145c504ef6c02acbbc 297 Pfam PF00691 OmpA family 153 237 3.5E-16 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS21575 b04e366bda73ea145c504ef6c02acbbc 297 PANTHER PTHR30329:SF4 1 267 2.3E-76 T 13-09-2016 PMA3_RS21575 b04e366bda73ea145c504ef6c02acbbc 297 PANTHER PTHR30329 1 267 2.3E-76 T 13-09-2016 PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-6 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 SUPERFAMILY SSF53850 91 286 1.57E-23 T 13-09-2016 PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 PANTHER PTHR30346 1 288 3.6E-68 T 13-09-2016 PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 SUPERFAMILY SSF46785 1 85 4.76E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 Gene3D G3DSA:3.40.190.10 88 177 3.9E-15 T 13-09-2016 PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 Gene3D G3DSA:1.10.10.10 1 84 2.8E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 Pfam PF03466 LysR substrate binding domain 90 287 1.5E-24 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.0E-24 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS12300 7732206228e2e282967d31e207cb98aa 288 Gene3D G3DSA:3.40.190.10 178 258 1.4E-13 T 13-09-2016 PMA3_RS06665 2e3b732cb2acb496a13517453f6d4eac 322 Pfam PF13353 4Fe-4S single cluster domain 15 102 2.0E-6 T 13-09-2016 PMA3_RS06665 2e3b732cb2acb496a13517453f6d4eac 322 Pfam PF06463 Molybdenum Cofactor Synthesis C 180 307 1.2E-28 T 13-09-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS06665 2e3b732cb2acb496a13517453f6d4eac 322 Gene3D G3DSA:3.20.20.70 3 285 1.0E-58 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS06665 2e3b732cb2acb496a13517453f6d4eac 322 SUPERFAMILY SSF102114 3 287 2.75E-59 T 13-09-2016 PMA3_RS06665 2e3b732cb2acb496a13517453f6d4eac 322 Pfam PF04055 Radical SAM superfamily 15 174 1.3E-21 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS06665 2e3b732cb2acb496a13517453f6d4eac 322 SMART SM00729 11 216 2.7E-5 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS06665 2e3b732cb2acb496a13517453f6d4eac 322 PANTHER PTHR22960 1 275 8.4E-83 T 13-09-2016 PMA3_RS28105 ff39a571897617e6209e16d3faff67e1 392 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 389 6.5E-187 T 13-09-2016 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 PMA3_RS28105 ff39a571897617e6209e16d3faff67e1 392 PANTHER PTHR24220:SF374 29 314 9.3E-158 T 13-09-2016 PMA3_RS28105 ff39a571897617e6209e16d3faff67e1 392 SUPERFAMILY SSF52540 34 274 6.08E-71 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28105 ff39a571897617e6209e16d3faff67e1 392 SMART SM00382 52 253 1.4E-14 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS28105 ff39a571897617e6209e16d3faff67e1 392 Gene3D G3DSA:3.40.50.300 37 268 1.4E-70 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28105 ff39a571897617e6209e16d3faff67e1 392 PANTHER PTHR24220 29 314 9.3E-158 T 13-09-2016 PMA3_RS28105 ff39a571897617e6209e16d3faff67e1 392 Pfam PF00005 ABC transporter 44 195 4.2E-29 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS28105 ff39a571897617e6209e16d3faff67e1 392 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS00580 c4c68fe230d5b73bd9f0a784c9d7d7d1 289 SUPERFAMILY SSF161098 22 275 2.22E-54 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00580 c4c68fe230d5b73bd9f0a784c9d7d7d1 289 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 21 277 2.1E-96 T 13-09-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 PMA3_RS00580 c4c68fe230d5b73bd9f0a784c9d7d7d1 289 PANTHER PTHR30406 15 286 1.3E-152 T 13-09-2016 PMA3_RS00580 c4c68fe230d5b73bd9f0a784c9d7d7d1 289 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 22 279 8.6E-119 T 13-09-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 PMA3_RS00580 c4c68fe230d5b73bd9f0a784c9d7d7d1 289 Gene3D G3DSA:1.10.3720.10 22 281 1.0E-50 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00580 c4c68fe230d5b73bd9f0a784c9d7d7d1 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 279 2.4E-17 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00580 c4c68fe230d5b73bd9f0a784c9d7d7d1 289 PANTHER PTHR30406:SF1 15 286 1.3E-152 T 13-09-2016 PMA3_RS26435 da53cf12466dd7bfaf1b7f27b43019b7 518 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 373 502 1.6E-16 T 13-09-2016 IPR019262 Domain of unknown function DUF2272 PMA3_RS26435 da53cf12466dd7bfaf1b7f27b43019b7 518 SUPERFAMILY SSF51445 15 161 2.53E-9 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS26435 da53cf12466dd7bfaf1b7f27b43019b7 518 Pfam PF08924 Domain of unknown function (DUF1906) 34 151 2.6E-21 T 13-09-2016 IPR015020 Protein of unknown function DUF1906 PMA3_RS26435 da53cf12466dd7bfaf1b7f27b43019b7 518 Gene3D G3DSA:3.20.20.80 14 204 5.8E-21 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS13350 b3cf1126a113bdc643bafcedfaf0b035 383 SUPERFAMILY SSF50952 37 380 3.14E-47 T 13-09-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 PMA3_RS13350 b3cf1126a113bdc643bafcedfaf0b035 383 PANTHER PTHR19328 37 376 2.4E-89 T 13-09-2016 PMA3_RS13350 b3cf1126a113bdc643bafcedfaf0b035 383 Gene3D G3DSA:2.120.10.30 33 380 1.5E-108 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS13350 b3cf1126a113bdc643bafcedfaf0b035 383 Pfam PF07995 Glucose / Sorbosone dehydrogenase 46 378 6.4E-142 T 13-09-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 PMA3_RS16780 94284f59f540698a0143a5e58f242f5b 348 Pfam PF03060 Nitronate monooxygenase 4 343 1.5E-77 T 13-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PMA3_RS16780 94284f59f540698a0143a5e58f242f5b 348 Gene3D G3DSA:3.20.20.70 2 336 1.5E-64 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS16780 94284f59f540698a0143a5e58f242f5b 348 PANTHER PTHR32332 1 80 3.3E-118 T 13-09-2016 PMA3_RS16780 94284f59f540698a0143a5e58f242f5b 348 PANTHER PTHR32332 110 346 3.3E-118 T 13-09-2016 PMA3_RS16780 94284f59f540698a0143a5e58f242f5b 348 SUPERFAMILY SSF51412 1 73 6.41E-60 T 13-09-2016 PMA3_RS16780 94284f59f540698a0143a5e58f242f5b 348 SUPERFAMILY SSF51412 103 341 6.41E-60 T 13-09-2016 PMA3_RS16780 94284f59f540698a0143a5e58f242f5b 348 PANTHER PTHR32332:SF12 1 80 3.3E-118 T 13-09-2016 PMA3_RS16780 94284f59f540698a0143a5e58f242f5b 348 PANTHER PTHR32332:SF12 110 346 3.3E-118 T 13-09-2016 PMA3_RS01780 9df680bcaed959a5c95300e761bd3aeb 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 318 6.9E-86 T 13-09-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PMA3_RS01780 9df680bcaed959a5c95300e761bd3aeb 344 PANTHER PTHR30160 1 344 3.1E-102 T 13-09-2016 PMA3_RS01780 9df680bcaed959a5c95300e761bd3aeb 344 SUPERFAMILY SSF53756 1 336 6.28E-100 T 13-09-2016 PMA3_RS01780 9df680bcaed959a5c95300e761bd3aeb 344 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 337 6.7E-163 T 13-09-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 PMA3_RS01780 9df680bcaed959a5c95300e761bd3aeb 344 Gene3D G3DSA:3.40.50.2000 1 148 5.5E-55 T 13-09-2016 PMA3_RS01780 9df680bcaed959a5c95300e761bd3aeb 344 PANTHER PTHR30160:SF7 1 344 3.1E-102 T 13-09-2016 PMA3_RS01780 9df680bcaed959a5c95300e761bd3aeb 344 Gene3D G3DSA:3.40.50.2000 162 336 3.6E-55 T 13-09-2016 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 216 230 - T 13-09-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 Gene3D G3DSA:3.40.190.80 154 266 3.3E-40 T 13-09-2016 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 Pfam PF00459 Inositol monophosphatase family 1 259 1.1E-66 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 13-09-2016 IPR020583 Inositol monophosphatase, metal-binding site PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 203 215 1.7E-21 T 13-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.7E-21 T 13-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 161 187 1.7E-21 T 13-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 107 126 1.7E-21 T 13-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PANTHER PTHR20854 1 263 8.1E-97 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 SUPERFAMILY SSF56655 1 266 3.8E-84 T 13-09-2016 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 Gene3D G3DSA:3.30.540.10 2 153 5.2E-49 T 13-09-2016 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 8.5E-62 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 8.5E-62 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 8.5E-62 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 8.5E-62 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 8.5E-62 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 8.5E-62 T 13-09-2016 IPR000760 Inositol monophosphatase GO:0046854 PMA3_RS24290 fd311ae31351c32e34a14f35f125c08b 272 PANTHER PTHR20854:SF4 1 263 8.1E-97 T 13-09-2016 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 Gene3D G3DSA:1.10.10.10 153 210 2.1E-26 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 Pfam PF00072 Response regulator receiver domain 9 120 1.5E-31 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 PANTHER PTHR26402 7 209 1.4E-91 T 13-09-2016 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 SMART SM00421 150 207 1.3E-22 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 Gene3D G3DSA:3.40.50.2300 6 152 1.6E-40 T 13-09-2016 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.5E-13 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.5E-13 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.5E-13 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 1.9E-20 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 PANTHER PTHR26402:SF555 7 209 1.4E-91 T 13-09-2016 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 SUPERFAMILY SSF46894 140 210 4.76E-21 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 SUPERFAMILY SSF52172 7 137 2.99E-37 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS16210 3484ec671d22cd2d1b7f7cb0a0811f0d 215 SMART SM00448 7 120 3.7E-34 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS22680 85c52c164b18a343f492cf5370095462 355 Gene3D G3DSA:3.40.50.1820 116 208 8.0E-10 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS22680 85c52c164b18a343f492cf5370095462 355 Gene3D G3DSA:3.40.50.1820 246 312 8.0E-10 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS22680 85c52c164b18a343f492cf5370095462 355 SUPERFAMILY SSF53474 118 312 1.22E-10 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS09720 82a3b9a3869a7423268ad6ed07450a15 382 Gene3D G3DSA:1.20.1090.10 183 382 1.3E-74 T 13-09-2016 PMA3_RS09720 82a3b9a3869a7423268ad6ed07450a15 382 SUPERFAMILY SSF56796 3 382 2.22E-129 T 13-09-2016 PMA3_RS09720 82a3b9a3869a7423268ad6ed07450a15 382 PANTHER PTHR11496:SF77 1 382 1.9E-119 T 13-09-2016 PMA3_RS09720 82a3b9a3869a7423268ad6ed07450a15 382 Gene3D G3DSA:3.40.50.1970 2 182 1.1E-54 T 13-09-2016 PMA3_RS09720 82a3b9a3869a7423268ad6ed07450a15 382 PANTHER PTHR11496 1 382 1.9E-119 T 13-09-2016 PMA3_RS09720 82a3b9a3869a7423268ad6ed07450a15 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 374 1.1E-122 T 13-09-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PMA3_RS00585 94c7a211184097bd6eb0a4e5b5c2c409 329 PANTHER PTHR24220 4 276 3.7E-139 T 13-09-2016 PMA3_RS00585 94c7a211184097bd6eb0a4e5b5c2c409 329 PANTHER PTHR24220:SF123 4 276 3.7E-139 T 13-09-2016 PMA3_RS00585 94c7a211184097bd6eb0a4e5b5c2c409 329 Pfam PF12857 TOBE-like domain 266 321 2.3E-10 T 13-09-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 PMA3_RS00585 94c7a211184097bd6eb0a4e5b5c2c409 329 SMART SM00382 27 214 2.6E-20 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS00585 94c7a211184097bd6eb0a4e5b5c2c409 329 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 7.4E-119 T 13-09-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 PMA3_RS00585 94c7a211184097bd6eb0a4e5b5c2c409 329 SUPERFAMILY SSF50331 237 321 1.87E-7 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS00585 94c7a211184097bd6eb0a4e5b5c2c409 329 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS00585 94c7a211184097bd6eb0a4e5b5c2c409 329 Gene3D G3DSA:3.40.50.300 2 237 2.1E-84 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00585 94c7a211184097bd6eb0a4e5b5c2c409 329 SUPERFAMILY SSF52540 3 243 6.01E-88 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00585 94c7a211184097bd6eb0a4e5b5c2c409 329 Pfam PF00005 ABC transporter 18 164 8.7E-38 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 SUPERFAMILY SSF109604 21 187 7.71E-63 T 13-09-2016 PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 SUPERFAMILY SSF109604 224 432 7.71E-63 T 13-09-2016 PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 Gene3D G3DSA:1.10.3550.10 352 440 4.0E-31 T 13-09-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 Gene3D G3DSA:1.10.3550.10 113 146 4.0E-31 T 13-09-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 431 7.4E-95 T 13-09-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 Pfam PF01966 HD domain 61 127 7.2E-8 T 13-09-2016 IPR006674 HD domain PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 Gene3D G3DSA:1.10.3210.10 3 112 5.5E-65 T 13-09-2016 IPR006674 HD domain PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 Gene3D G3DSA:1.10.3210.10 149 244 5.5E-65 T 13-09-2016 IPR006674 HD domain PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 PANTHER PTHR11373:SF29 148 189 2.2E-80 T 13-09-2016 PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 PANTHER PTHR11373:SF29 1 132 2.2E-80 T 13-09-2016 PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 Gene3D G3DSA:1.10.3410.10 245 351 6.7E-36 T 13-09-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 PANTHER PTHR11373 148 189 2.2E-80 T 13-09-2016 PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 PANTHER PTHR11373 1 132 2.2E-80 T 13-09-2016 PMA3_RS07125 1f3126c3b7711e26b8b2195e5431cd5a 442 SMART SM00471 57 255 6.9E-9 T 13-09-2016 IPR003607 HD/PDEase domain PMA3_RS01600 9aa34d0d0a65fa48a0519bdc4a498b39 153 SUPERFAMILY SSF54637 5 140 2.01E-21 T 13-09-2016 IPR029069 HotDog domain PMA3_RS01600 9aa34d0d0a65fa48a0519bdc4a498b39 153 PIRSF PIRSF020565 1 150 1.0E-57 T 13-09-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted PMA3_RS01600 9aa34d0d0a65fa48a0519bdc4a498b39 153 Gene3D G3DSA:3.10.129.10 7 124 9.2E-12 T 13-09-2016 IPR029069 HotDog domain PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 Pfam PF00664 ABC transporter transmembrane region 26 283 6.2E-11 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 Gene3D G3DSA:3.40.50.300 331 556 4.1E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 SUPERFAMILY SSF52540 321 556 9.61E-68 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 18 558 2.5E-235 T 13-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 SUPERFAMILY SSF90123 12 320 3.14E-44 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 Pfam PF00005 ABC transporter 350 496 1.4E-30 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 Gene3D G3DSA:1.20.1560.10 12 318 1.4E-38 T 13-09-2016 PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 SMART SM00382 358 544 9.6E-13 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 PANTHER PTHR24222:SF0 11 583 3.5E-269 T 13-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS13755 2dc0eed642b7632e9f83e05f9570b540 591 PANTHER PTHR24222 11 583 3.5E-269 T 13-09-2016 PMA3_RS21710 47e7b7362e9b1c0e2cd83dc34e073c33 149 PANTHER PTHR38786 1 148 2.0E-30 T 13-09-2016 PMA3_RS21710 47e7b7362e9b1c0e2cd83dc34e073c33 149 Pfam PF02050 Flagellar FliJ protein 22 143 8.3E-34 T 13-09-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PMA3_RS21710 47e7b7362e9b1c0e2cd83dc34e073c33 149 PRINTS PR01004 Flagellar FliJ protein signature 65 86 7.1E-6 T 13-09-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PMA3_RS21710 47e7b7362e9b1c0e2cd83dc34e073c33 149 PRINTS PR01004 Flagellar FliJ protein signature 6 28 7.1E-6 T 13-09-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PMA3_RS21710 47e7b7362e9b1c0e2cd83dc34e073c33 149 PRINTS PR01004 Flagellar FliJ protein signature 128 148 7.1E-6 T 13-09-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PMA3_RS21710 47e7b7362e9b1c0e2cd83dc34e073c33 149 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 7 144 7.6E-37 T 13-09-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PMA3_RS21710 47e7b7362e9b1c0e2cd83dc34e073c33 149 PIRSF PIRSF019404 1 149 1.3E-37 T 13-09-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PMA3_RS10025 1d5655818f1efef06af5b99ed279a777 317 SUPERFAMILY SSF161098 94 277 1.03E-40 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS10025 1d5655818f1efef06af5b99ed279a777 317 PANTHER PTHR30177:SF2 13 297 3.0E-120 T 13-09-2016 PMA3_RS10025 1d5655818f1efef06af5b99ed279a777 317 Gene3D G3DSA:1.10.3720.10 94 277 2.5E-41 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS10025 1d5655818f1efef06af5b99ed279a777 317 PANTHER PTHR30177 13 297 3.0E-120 T 13-09-2016 PMA3_RS10025 1d5655818f1efef06af5b99ed279a777 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 283 5.1E-26 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28100 9a170592ab5d0e2cdd194fd0ad4c8f5c 281 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 4 270 4.1E-128 T 13-09-2016 IPR017784 ABC transporter, choline, permease protein PMA3_RS28100 9a170592ab5d0e2cdd194fd0ad4c8f5c 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 265 1.2E-26 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28100 9a170592ab5d0e2cdd194fd0ad4c8f5c 281 Gene3D G3DSA:1.10.3720.10 83 266 4.5E-34 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28100 9a170592ab5d0e2cdd194fd0ad4c8f5c 281 PANTHER PTHR30177:SF2 5 272 2.2E-115 T 13-09-2016 PMA3_RS28100 9a170592ab5d0e2cdd194fd0ad4c8f5c 281 PANTHER PTHR30177 5 272 2.2E-115 T 13-09-2016 PMA3_RS28100 9a170592ab5d0e2cdd194fd0ad4c8f5c 281 SUPERFAMILY SSF161098 86 270 1.7E-38 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS27020 69320e6ad14718170ebfbfe32e9c8239 294 PANTHER PTHR10491:SF4 1 290 4.2E-54 T 13-09-2016 PMA3_RS27020 69320e6ad14718170ebfbfe32e9c8239 294 Gene3D G3DSA:3.40.50.720 2 229 3.2E-21 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27020 69320e6ad14718170ebfbfe32e9c8239 294 Pfam PF04321 RmlD substrate binding domain 3 290 1.1E-73 T 13-09-2016 IPR029903 RmlD-like substrate binding domain PMA3_RS27020 69320e6ad14718170ebfbfe32e9c8239 294 SUPERFAMILY SSF51735 3 291 2.28E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27020 69320e6ad14718170ebfbfe32e9c8239 294 PANTHER PTHR10491 1 290 4.2E-54 T 13-09-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family PMA3_RS21610 26b2b846a61813cf3274e2281b703316 276 PIRSF PIRSF003092 3 272 5.1E-82 T 13-09-2016 IPR025501 ATP binding protein MinD PMA3_RS21610 26b2b846a61813cf3274e2281b703316 276 PANTHER PTHR13696 1 259 1.4E-119 T 13-09-2016 PMA3_RS21610 26b2b846a61813cf3274e2281b703316 276 Gene3D G3DSA:3.40.50.300 9 269 3.2E-57 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21610 26b2b846a61813cf3274e2281b703316 276 PANTHER PTHR13696:SF3 1 259 1.4E-119 T 13-09-2016 PMA3_RS21610 26b2b846a61813cf3274e2281b703316 276 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 217 1.9E-24 T 13-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PMA3_RS21610 26b2b846a61813cf3274e2281b703316 276 SUPERFAMILY SSF52540 8 268 1.1E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS27225 6aed8ae86fa85c95af09f2a8790cc2ad 63 Pfam PF00831 Ribosomal L29 protein 4 59 5.4E-22 T 13-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27225 6aed8ae86fa85c95af09f2a8790cc2ad 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 13-09-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27225 6aed8ae86fa85c95af09f2a8790cc2ad 63 PANTHER PTHR10916 1 57 4.9E-24 T 13-09-2016 PMA3_RS27225 6aed8ae86fa85c95af09f2a8790cc2ad 63 Gene3D G3DSA:1.10.287.310 1 60 8.8E-26 T 13-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27225 6aed8ae86fa85c95af09f2a8790cc2ad 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 9.2E-20 T 13-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27225 6aed8ae86fa85c95af09f2a8790cc2ad 63 SUPERFAMILY SSF46561 1 61 4.19E-20 T 13-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS27225 6aed8ae86fa85c95af09f2a8790cc2ad 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.157 T 13-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PMA3_RS24960 10c1708768e5868a9667c2edbf031c23 161 PANTHER PTHR10516:SF316 3 74 1.7E-40 T 13-09-2016 PMA3_RS24960 10c1708768e5868a9667c2edbf031c23 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 137 4.2E-12 T 13-09-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PMA3_RS24960 10c1708768e5868a9667c2edbf031c23 161 PANTHER PTHR10516 130 161 1.7E-40 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS24960 10c1708768e5868a9667c2edbf031c23 161 SUPERFAMILY SSF54534 3 141 1.12E-36 T 13-09-2016 PMA3_RS24960 10c1708768e5868a9667c2edbf031c23 161 Gene3D G3DSA:3.10.50.40 123 142 8.3E-19 T 13-09-2016 PMA3_RS24960 10c1708768e5868a9667c2edbf031c23 161 Gene3D G3DSA:3.10.50.40 4 69 8.3E-19 T 13-09-2016 PMA3_RS24960 10c1708768e5868a9667c2edbf031c23 161 PANTHER PTHR10516 3 74 1.7E-40 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS24960 10c1708768e5868a9667c2edbf031c23 161 PANTHER PTHR10516:SF316 130 161 1.7E-40 T 13-09-2016 PMA3_RS21265 a7c672f292b56bc5bfd7812cfc83a582 234 Gene3D G3DSA:1.10.1060.10 105 232 3.0E-47 T 13-09-2016 PMA3_RS21265 a7c672f292b56bc5bfd7812cfc83a582 234 SUPERFAMILY SSF46548 104 231 5.41E-38 T 13-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PMA3_RS21265 a7c672f292b56bc5bfd7812cfc83a582 234 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 107 5.6E-30 T 13-09-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PMA3_RS21265 a7c672f292b56bc5bfd7812cfc83a582 234 SUPERFAMILY SSF54292 2 103 5.78E-26 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS21265 a7c672f292b56bc5bfd7812cfc83a582 234 Pfam PF13534 4Fe-4S dicluster domain 144 217 1.5E-8 T 13-09-2016 PMA3_RS21265 a7c672f292b56bc5bfd7812cfc83a582 234 Gene3D G3DSA:3.10.20.30 2 103 2.4E-34 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS21265 a7c672f292b56bc5bfd7812cfc83a582 234 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 13-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PMA3_RS21265 a7c672f292b56bc5bfd7812cfc83a582 234 PANTHER PTHR11921:SF29 1 231 5.9E-130 T 13-09-2016 PMA3_RS21265 a7c672f292b56bc5bfd7812cfc83a582 234 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 6 226 7.7E-85 T 13-09-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PMA3_RS21265 a7c672f292b56bc5bfd7812cfc83a582 234 PANTHER PTHR11921 1 231 5.9E-130 T 13-09-2016 PMA3_RS04140 1bce78b6092bd32d0a9e19ede02a6204 405 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 25 380 1.0E-128 T 13-09-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 PMA3_RS04140 1bce78b6092bd32d0a9e19ede02a6204 405 PANTHER PTHR30474:SF2 2 399 8.8E-162 T 13-09-2016 PMA3_RS04140 1bce78b6092bd32d0a9e19ede02a6204 405 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 21 390 40.442 T 13-09-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 PMA3_RS04140 1bce78b6092bd32d0a9e19ede02a6204 405 Pfam PF01098 Cell cycle protein 27 381 1.3E-101 T 13-09-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PMA3_RS04140 1bce78b6092bd32d0a9e19ede02a6204 405 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 13-09-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 PMA3_RS04140 1bce78b6092bd32d0a9e19ede02a6204 405 PANTHER PTHR30474 2 399 8.8E-162 T 13-09-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PMA3_RS07790 e0035f1a70ceee92c2e85f127b3bd985 261 SUPERFAMILY SSF111364 26 261 2.48E-71 T 13-09-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PMA3_RS07790 e0035f1a70ceee92c2e85f127b3bd985 261 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 60 252 2.8E-10 T 13-09-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PMA3_RS07790 e0035f1a70ceee92c2e85f127b3bd985 261 Gene3D G3DSA:2.40.230.20 19 261 4.1E-83 T 13-09-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PMA3_RS11145 3cee6f479921e6cbe1c69098735e59b6 376 SUPERFAMILY SSF103025 5 283 2.35E-69 T 13-09-2016 PMA3_RS11145 3cee6f479921e6cbe1c69098735e59b6 376 Gene3D G3DSA:2.40.30.110 290 372 2.2E-9 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS11145 3cee6f479921e6cbe1c69098735e59b6 376 PIRSF PIRSF006487 1 376 2.6E-82 T 13-09-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS11145 3cee6f479921e6cbe1c69098735e59b6 376 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 273 352 2.7E-6 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS11145 3cee6f479921e6cbe1c69098735e59b6 376 Gene3D G3DSA:3.30.70.1400 58 125 1.6E-19 T 13-09-2016 PMA3_RS11145 3cee6f479921e6cbe1c69098735e59b6 376 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 245 8.4E-61 T 13-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal PMA3_RS11145 3cee6f479921e6cbe1c69098735e59b6 376 Gene3D G3DSA:3.30.1360.120 7 57 5.8E-36 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS11145 3cee6f479921e6cbe1c69098735e59b6 376 Gene3D G3DSA:3.30.1360.120 141 233 5.8E-36 T 13-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PMA3_RS11145 3cee6f479921e6cbe1c69098735e59b6 376 SUPERFAMILY SSF101790 290 372 5.89E-10 T 13-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PMA3_RS13495 9c36b1e85a6312dd26245c6f09eb1383 70 Pfam PF06348 Protein of unknown function (DUF1059) 4 59 1.9E-12 T 13-09-2016 IPR009409 Protein of unknown function DUF1059 PMA3_RS02425 7098a3b7a77bc5a7c04fa61e2282ce0a 359 PANTHER PTHR30482 1 95 2.9E-186 T 13-09-2016 PMA3_RS02425 7098a3b7a77bc5a7c04fa61e2282ce0a 359 PANTHER PTHR30482 117 359 2.9E-186 T 13-09-2016 PMA3_RS02425 7098a3b7a77bc5a7c04fa61e2282ce0a 359 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 44 352 1.3E-132 T 13-09-2016 IPR017778 ABC transporter, urea, permease protein, UrtC PMA3_RS02425 7098a3b7a77bc5a7c04fa61e2282ce0a 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 341 2.4E-40 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS02425 7098a3b7a77bc5a7c04fa61e2282ce0a 359 PANTHER PTHR30482:SF4 1 95 2.9E-186 T 13-09-2016 IPR017778 ABC transporter, urea, permease protein, UrtC PMA3_RS02425 7098a3b7a77bc5a7c04fa61e2282ce0a 359 PANTHER PTHR30482:SF4 117 359 2.9E-186 T 13-09-2016 IPR017778 ABC transporter, urea, permease protein, UrtC PMA3_RS23350 a3981126a637f87a84154beebc40a7db 405 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 405 154.975 T 13-09-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PMA3_RS23350 a3981126a637f87a84154beebc40a7db 405 SUPERFAMILY SSF56266 14 402 6.15E-133 T 13-09-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PMA3_RS23350 a3981126a637f87a84154beebc40a7db 405 PANTHER PTHR23100:SF0 16 405 4.3E-173 T 13-09-2016 PMA3_RS23350 a3981126a637f87a84154beebc40a7db 405 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 14 405 1.3E-117 T 13-09-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PMA3_RS23350 a3981126a637f87a84154beebc40a7db 405 PANTHER PTHR23100 16 405 4.3E-173 T 13-09-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PMA3_RS23350 a3981126a637f87a84154beebc40a7db 405 Gene3D G3DSA:3.60.70.12 11 276 1.8E-93 T 13-09-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PMA3_RS23350 a3981126a637f87a84154beebc40a7db 405 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 405 0.0 T 13-09-2016 PMA3_RS23350 a3981126a637f87a84154beebc40a7db 405 Pfam PF01960 ArgJ family 21 405 1.0E-137 T 13-09-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PMA3_RS27450 1c7a15a20ff2d00d2f3bd81ddaa8b7b9 140 PANTHER PTHR34352 1 140 3.6E-51 T 13-09-2016 PMA3_RS27450 1c7a15a20ff2d00d2f3bd81ddaa8b7b9 140 Gene3D G3DSA:3.30.300.20 39 137 5.1E-42 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS27450 1c7a15a20ff2d00d2f3bd81ddaa8b7b9 140 Pfam PF02566 OsmC-like protein 34 132 4.3E-18 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS27450 1c7a15a20ff2d00d2f3bd81ddaa8b7b9 140 Gene3D G3DSA:2.20.25.10 1 34 1.7E-17 T 13-09-2016 PMA3_RS27450 1c7a15a20ff2d00d2f3bd81ddaa8b7b9 140 SUPERFAMILY SSF82784 1 137 4.32E-39 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS04970 a43cda02b5f7ee744db022357fc2c64e 225 SUPERFAMILY SSF53335 16 221 4.66E-43 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04970 a43cda02b5f7ee744db022357fc2c64e 225 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 16 225 38.982 T 13-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PMA3_RS04970 a43cda02b5f7ee744db022357fc2c64e 225 PANTHER PTHR11579 11 221 7.6E-87 T 13-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PMA3_RS04970 a43cda02b5f7ee744db022357fc2c64e 225 Gene3D G3DSA:3.40.50.150 30 221 1.3E-59 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS04970 a43cda02b5f7ee744db022357fc2c64e 225 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 16 222 1.1E-68 T 13-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PMA3_RS04970 a43cda02b5f7ee744db022357fc2c64e 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 21 220 2.5E-64 T 13-09-2016 PMA3_RS04970 a43cda02b5f7ee744db022357fc2c64e 225 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 146 161 - T 13-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PMA3_RS23110 a2a8032354f2ab97b741e94d429e1be5 243 Pfam PF00072 Response regulator receiver domain 8 120 4.4E-30 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23110 a2a8032354f2ab97b741e94d429e1be5 243 SMART SM00448 6 119 1.1E-44 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS23110 a2a8032354f2ab97b741e94d429e1be5 243 SUPERFAMILY SSF52172 5 130 3.42E-43 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS23110 a2a8032354f2ab97b741e94d429e1be5 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 3.0E-18 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS23110 a2a8032354f2ab97b741e94d429e1be5 243 PANTHER PTHR26402 6 237 1.3E-135 T 13-09-2016 PMA3_RS23110 a2a8032354f2ab97b741e94d429e1be5 243 Gene3D G3DSA:1.10.10.10 135 235 1.3E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23110 a2a8032354f2ab97b741e94d429e1be5 243 PANTHER PTHR26402:SF528 6 237 1.3E-135 T 13-09-2016 PMA3_RS23110 a2a8032354f2ab97b741e94d429e1be5 243 SMART SM00862 157 233 5.4E-15 T 13-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PMA3_RS23110 a2a8032354f2ab97b741e94d429e1be5 243 SUPERFAMILY SSF46894 137 234 2.35E-22 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS23110 a2a8032354f2ab97b741e94d429e1be5 243 Gene3D G3DSA:3.40.50.2300 5 130 4.6E-43 T 13-09-2016 PMA3_RS28765 fd84cfccb9f86713702284a7a89d60eb 159 PANTHER PTHR23114 1 152 7.1E-53 T 13-09-2016 PMA3_RS28765 fd84cfccb9f86713702284a7a89d60eb 159 Gene3D G3DSA:3.90.79.10 3 151 1.9E-30 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS28765 fd84cfccb9f86713702284a7a89d60eb 159 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.1E-6 T 13-09-2016 IPR020476 NUDIX hydrolase PMA3_RS28765 fd84cfccb9f86713702284a7a89d60eb 159 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.1E-6 T 13-09-2016 IPR020476 NUDIX hydrolase PMA3_RS28765 fd84cfccb9f86713702284a7a89d60eb 159 Pfam PF00293 NUDIX domain 7 146 3.6E-26 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS28765 fd84cfccb9f86713702284a7a89d60eb 159 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.388 T 13-09-2016 IPR022927 RNA pyrophosphohydrolase RppH PMA3_RS28765 fd84cfccb9f86713702284a7a89d60eb 159 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 13-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PMA3_RS28765 fd84cfccb9f86713702284a7a89d60eb 159 SUPERFAMILY SSF55811 4 156 1.0E-31 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS23960 3343a92e76b1d2a61543b73fd8d4df67 124 PIRSF PIRSF006298 2 121 7.7E-37 T 13-09-2016 IPR016480 Glucose translocase, bactoprenol-linked PMA3_RS23960 3343a92e76b1d2a61543b73fd8d4df67 124 Pfam PF04138 GtrA-like protein 11 119 3.2E-11 T 13-09-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PMA3_RS23960 3343a92e76b1d2a61543b73fd8d4df67 124 PANTHER PTHR38459:SF1 5 124 6.4E-17 T 13-09-2016 PMA3_RS23960 3343a92e76b1d2a61543b73fd8d4df67 124 PANTHER PTHR38459 5 124 6.4E-17 T 13-09-2016 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 SUPERFAMILY SSF52949 1 182 1.82E-45 T 13-09-2016 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 PANTHER PTHR11963:SF13 7 495 1.4E-231 T 13-09-2016 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 346 353 - T 13-09-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 486 2.1E-122 T 13-09-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 PANTHER PTHR11963 7 495 1.4E-231 T 13-09-2016 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 Gene3D G3DSA:3.40.630.10 177 493 1.0E-141 T 13-09-2016 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 Gene3D G3DSA:3.40.220.10 1 159 2.6E-55 T 13-09-2016 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 495 40.986 T 13-09-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 SUPERFAMILY SSF53187 177 493 1.07E-127 T 13-09-2016 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 PRINTS PR00481 Cytosol aminopeptidase signature 320 341 2.6E-55 T 13-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 PRINTS PR00481 Cytosol aminopeptidase signature 283 304 2.6E-55 T 13-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 PRINTS PR00481 Cytosol aminopeptidase signature 261 278 2.6E-55 T 13-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 PRINTS PR00481 Cytosol aminopeptidase signature 342 362 2.6E-55 T 13-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 PRINTS PR00481 Cytosol aminopeptidase signature 370 385 2.6E-55 T 13-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PMA3_RS04350 c1aab93bf464dcd53349b9b7a890e5a9 496 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.3E-29 T 13-09-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PMA3_RS26535 49e3fe89bc61dc62e9065891a0b8430c 297 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 13-09-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PMA3_RS26535 49e3fe89bc61dc62e9065891a0b8430c 297 Pfam PF01163 RIO1 family 31 222 1.5E-45 T 13-09-2016 PMA3_RS26535 49e3fe89bc61dc62e9065891a0b8430c 297 SUPERFAMILY SSF56112 18 222 1.36E-20 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS26535 49e3fe89bc61dc62e9065891a0b8430c 297 Gene3D G3DSA:1.10.510.10 138 227 8.1E-20 T 13-09-2016 PMA3_RS26535 49e3fe89bc61dc62e9065891a0b8430c 297 Gene3D G3DSA:3.30.200.20 17 125 2.5E-14 T 13-09-2016 PMA3_RS26535 49e3fe89bc61dc62e9065891a0b8430c 297 SMART SM00090 2 234 1.3E-16 T 13-09-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PMA3_RS26535 49e3fe89bc61dc62e9065891a0b8430c 297 PANTHER PTHR10593 6 273 1.3E-131 T 13-09-2016 PMA3_RS26535 49e3fe89bc61dc62e9065891a0b8430c 297 PANTHER PTHR10593:SF19 6 273 1.3E-131 T 13-09-2016 PMA3_RS23655 0b58d023dc2e00d685234f57d46c23b5 222 Pfam PF13649 Methyltransferase domain 55 149 9.1E-14 T 13-09-2016 PMA3_RS23655 0b58d023dc2e00d685234f57d46c23b5 222 PANTHER PTHR10108 7 218 1.6E-47 T 13-09-2016 PMA3_RS23655 0b58d023dc2e00d685234f57d46c23b5 222 Gene3D G3DSA:3.40.50.150 11 211 4.7E-24 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS23655 0b58d023dc2e00d685234f57d46c23b5 222 SUPERFAMILY SSF53335 11 219 1.67E-27 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS23655 0b58d023dc2e00d685234f57d46c23b5 222 PANTHER PTHR10108:SF855 7 218 1.6E-47 T 13-09-2016 PMA3_RS06200 336b89f08c07097a841137d94d988505 327 PANTHER PTHR30388:SF4 5 314 3.6E-78 T 13-09-2016 PMA3_RS06200 336b89f08c07097a841137d94d988505 327 PANTHER PTHR30388 5 314 3.6E-78 T 13-09-2016 PMA3_RS06200 336b89f08c07097a841137d94d988505 327 Pfam PF02625 XdhC and CoxI family 15 67 1.7E-19 T 13-09-2016 IPR003777 XdhC- CoxI PMA3_RS06200 336b89f08c07097a841137d94d988505 327 Pfam PF13478 XdhC Rossmann domain 167 308 9.7E-37 T 13-09-2016 IPR027051 XdhC Rossmann domain PMA3_RS06200 336b89f08c07097a841137d94d988505 327 Gene3D G3DSA:3.40.50.720 167 277 8.2E-5 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20430 047f886b36fdf36742ca0df61d2e64cd 270 Gene3D G3DSA:3.30.950.10 118 243 7.5E-39 T 13-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PMA3_RS20430 047f886b36fdf36742ca0df61d2e64cd 270 SUPERFAMILY SSF53790 1 234 3.4E-69 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS20430 047f886b36fdf36742ca0df61d2e64cd 270 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 13-09-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS20430 047f886b36fdf36742ca0df61d2e64cd 270 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 233 4.5E-91 T 13-09-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS20430 047f886b36fdf36742ca0df61d2e64cd 270 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 13-09-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PMA3_RS20430 047f886b36fdf36742ca0df61d2e64cd 270 PANTHER PTHR21091 1 230 4.0E-68 T 13-09-2016 PMA3_RS20430 047f886b36fdf36742ca0df61d2e64cd 270 Gene3D G3DSA:3.40.1010.10 3 117 6.0E-41 T 13-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PMA3_RS20430 047f886b36fdf36742ca0df61d2e64cd 270 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 5.9E-45 T 13-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PMA3_RS20430 047f886b36fdf36742ca0df61d2e64cd 270 PANTHER PTHR21091:SF16 1 230 4.0E-68 T 13-09-2016 PMA3_RS05380 7e7bf514ac87a4eb8bd1e3fde0fa91b5 280 SUPERFAMILY SSF55781 99 278 4.22E-49 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS05380 7e7bf514ac87a4eb8bd1e3fde0fa91b5 280 SMART SM00346 34 122 7.9E-32 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS05380 7e7bf514ac87a4eb8bd1e3fde0fa91b5 280 Gene3D G3DSA:1.10.10.10 22 92 6.0E-30 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05380 7e7bf514ac87a4eb8bd1e3fde0fa91b5 280 PANTHER PTHR30136:SF10 11 278 2.6E-107 T 13-09-2016 PMA3_RS05380 7e7bf514ac87a4eb8bd1e3fde0fa91b5 280 SUPERFAMILY SSF46785 35 105 1.34E-10 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05380 7e7bf514ac87a4eb8bd1e3fde0fa91b5 280 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 31 278 6.1E-106 T 13-09-2016 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 PMA3_RS05380 7e7bf514ac87a4eb8bd1e3fde0fa91b5 280 PANTHER PTHR30136 11 278 2.6E-107 T 13-09-2016 PMA3_RS05380 7e7bf514ac87a4eb8bd1e3fde0fa91b5 280 Pfam PF01614 Bacterial transcriptional regulator 151 276 1.5E-42 T 13-09-2016 IPR014757 Transcription regulator IclR, C-terminal PMA3_RS05380 7e7bf514ac87a4eb8bd1e3fde0fa91b5 280 Gene3D G3DSA:3.30.450.40 100 278 4.3E-58 T 13-09-2016 IPR029016 GAF domain-like PMA3_RS05380 7e7bf514ac87a4eb8bd1e3fde0fa91b5 280 Pfam PF09339 IclR helix-turn-helix domain 36 87 7.8E-14 T 13-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PMA3_RS29795 2d58595c2deb7765837a4fc26e8915e8 207 SUPERFAMILY SSF50475 11 193 4.77E-43 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS29795 2d58595c2deb7765837a4fc26e8915e8 207 PIRSF PIRSF010372 1 207 1.2E-81 T 13-09-2016 IPR007396 Transcriptional regulator PAI 2-type PMA3_RS29795 2d58595c2deb7765837a4fc26e8915e8 207 PANTHER PTHR35802:SF1 2 207 8.2E-61 T 13-09-2016 PMA3_RS29795 2d58595c2deb7765837a4fc26e8915e8 207 PANTHER PTHR35802 2 207 8.2E-61 T 13-09-2016 PMA3_RS29795 2d58595c2deb7765837a4fc26e8915e8 207 Pfam PF04299 Putative FMN-binding domain 1 168 9.1E-63 T 13-09-2016 IPR007396 Transcriptional regulator PAI 2-type PMA3_RS29795 2d58595c2deb7765837a4fc26e8915e8 207 Gene3D G3DSA:2.30.110.10 1 207 3.7E-76 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS18385 e33d32b357b358a455ac838b00eb7e1c 108 Gene3D G3DSA:3.40.190.10 8 42 2.7E-4 T 13-09-2016 PMA3_RS18385 e33d32b357b358a455ac838b00eb7e1c 108 SUPERFAMILY SSF53850 9 79 3.26E-10 T 13-09-2016 PMA3_RS18385 e33d32b357b358a455ac838b00eb7e1c 108 Pfam PF03466 LysR substrate binding domain 9 78 9.0E-10 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS15755 a1096710a0ac2fd72877bbf0275a595a 268 PANTHER PTHR30269 1 265 1.2E-42 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS15755 a1096710a0ac2fd72877bbf0275a595a 268 Pfam PF01925 Sulfite exporter TauE/SafE 6 262 1.7E-46 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS15755 a1096710a0ac2fd72877bbf0275a595a 268 PANTHER PTHR30269:SF14 1 265 1.2E-42 T 13-09-2016 PMA3_RS12890 c22edecdb7026465d21d2e0d4ebabccc 232 SUPERFAMILY SSF53474 4 230 1.89E-49 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS12890 c22edecdb7026465d21d2e0d4ebabccc 232 Pfam PF01738 Dienelactone hydrolase family 17 231 5.6E-55 T 13-09-2016 IPR002925 Dienelactone hydrolase GO:0016787 PMA3_RS12890 c22edecdb7026465d21d2e0d4ebabccc 232 PANTHER PTHR17630 16 232 3.4E-48 T 13-09-2016 PMA3_RS12890 c22edecdb7026465d21d2e0d4ebabccc 232 Gene3D G3DSA:3.40.50.1820 5 231 2.0E-56 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS26030 36108e9b55dde0c3a1cfbddbdc4f6efc 303 Gene3D G3DSA:3.90.1530.10 14 115 1.2E-19 T 13-09-2016 PMA3_RS26030 36108e9b55dde0c3a1cfbddbdc4f6efc 303 Pfam PF07506 RepB plasmid partitioning protein 111 275 3.7E-16 T 13-09-2016 IPR011111 RepB plasmid partition PMA3_RS26030 36108e9b55dde0c3a1cfbddbdc4f6efc 303 SUPERFAMILY SSF110849 11 113 5.41E-22 T 13-09-2016 IPR003115 ParB/Sulfiredoxin PMA3_RS26030 36108e9b55dde0c3a1cfbddbdc4f6efc 303 SMART SM00470 21 110 2.3E-16 T 13-09-2016 IPR003115 ParB/Sulfiredoxin PMA3_RS26030 36108e9b55dde0c3a1cfbddbdc4f6efc 303 PANTHER PTHR33375 16 295 1.3E-24 T 13-09-2016 PMA3_RS26030 36108e9b55dde0c3a1cfbddbdc4f6efc 303 PANTHER PTHR33375:SF1 16 295 1.3E-24 T 13-09-2016 PMA3_RS26030 36108e9b55dde0c3a1cfbddbdc4f6efc 303 SUPERFAMILY SSF109709 103 210 2.75E-14 T 13-09-2016 PMA3_RS26030 36108e9b55dde0c3a1cfbddbdc4f6efc 303 Pfam PF02195 ParB-like nuclease domain 23 109 3.9E-14 T 13-09-2016 IPR003115 ParB/Sulfiredoxin PMA3_RS07410 d02a893f16ffbace811ffa2d64a15912 186 PANTHER PTHR30328 1 177 3.2E-19 T 13-09-2016 PMA3_RS07410 d02a893f16ffbace811ffa2d64a15912 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 60 1.1E-8 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS07410 d02a893f16ffbace811ffa2d64a15912 186 SUPERFAMILY SSF46689 2 73 3.08E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS07410 d02a893f16ffbace811ffa2d64a15912 186 Gene3D G3DSA:1.10.10.60 5 59 1.8E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS07410 d02a893f16ffbace811ffa2d64a15912 186 Gene3D G3DSA:1.10.357.10 60 177 4.5E-33 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS07410 d02a893f16ffbace811ffa2d64a15912 186 SUPERFAMILY SSF48498 78 175 1.33E-22 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS07410 d02a893f16ffbace811ffa2d64a15912 186 PANTHER PTHR30328:SF18 1 177 3.2E-19 T 13-09-2016 PMA3_RS14880 0940639f08bfb5c0088cf95ce95e892c 259 Pfam PF01925 Sulfite exporter TauE/SafE 16 250 2.8E-42 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS14880 0940639f08bfb5c0088cf95ce95e892c 259 PANTHER PTHR30269 7 259 9.8E-144 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS14880 0940639f08bfb5c0088cf95ce95e892c 259 PANTHER PTHR30269:SF25 7 259 9.8E-144 T 13-09-2016 PMA3_RS25960 d1311ede5f420e122df08619394c1d62 452 PANTHER PTHR11271 22 450 6.4E-244 T 13-09-2016 PMA3_RS25960 d1311ede5f420e122df08619394c1d62 452 Gene3D G3DSA:2.30.40.10 17 68 3.2E-9 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS25960 d1311ede5f420e122df08619394c1d62 452 SUPERFAMILY SSF51338 375 448 3.87E-19 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS25960 d1311ede5f420e122df08619394c1d62 452 SUPERFAMILY SSF51338 6 60 3.87E-19 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS25960 d1311ede5f420e122df08619394c1d62 452 Pfam PF01979 Amidohydrolase family 57 422 4.8E-59 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS25960 d1311ede5f420e122df08619394c1d62 452 SUPERFAMILY SSF51556 60 374 1.54E-94 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS25960 d1311ede5f420e122df08619394c1d62 452 PANTHER PTHR11271:SF37 22 450 6.4E-244 T 13-09-2016 PMA3_RS25960 d1311ede5f420e122df08619394c1d62 452 Gene3D G3DSA:3.20.20.140 69 393 1.4E-102 T 13-09-2016 PMA3_RS26895 39c86044c52da5129d7f9b0c31167f45 295 Gene3D G3DSA:1.10.600.10 5 293 2.9E-92 T 13-09-2016 IPR008949 Isoprenoid synthase domain PMA3_RS26895 39c86044c52da5129d7f9b0c31167f45 295 SUPERFAMILY SSF48576 9 286 3.5E-85 T 13-09-2016 IPR008949 Isoprenoid synthase domain PMA3_RS26895 39c86044c52da5129d7f9b0c31167f45 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 13-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 PMA3_RS26895 39c86044c52da5129d7f9b0c31167f45 295 PANTHER PTHR12001 2 290 6.3E-106 T 13-09-2016 IPR017446 Polyprenyl synthetase-related PMA3_RS26895 39c86044c52da5129d7f9b0c31167f45 295 PANTHER PTHR12001:SF23 2 290 6.3E-106 T 13-09-2016 PMA3_RS26895 39c86044c52da5129d7f9b0c31167f45 295 Pfam PF00348 Polyprenyl synthetase 30 259 8.1E-56 T 13-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 PMA3_RS26895 39c86044c52da5129d7f9b0c31167f45 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 13-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 PMA3_RS14705 31d295a08969a373d5d0d75ce2c5c32f 114 SUPERFAMILY SSF47413 11 75 7.24E-9 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS14705 31d295a08969a373d5d0d75ce2c5c32f 114 Gene3D G3DSA:1.10.260.40 14 79 5.3E-8 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS26975 faed18197fb62b50c11f5276a187d449 218 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 81 153 1.1E-14 T 13-09-2016 PMA3_RS26975 faed18197fb62b50c11f5276a187d449 218 PANTHER PTHR18895:SF3 54 190 2.7E-20 T 13-09-2016 PMA3_RS26975 faed18197fb62b50c11f5276a187d449 218 Gene3D G3DSA:3.40.50.150 47 181 5.5E-33 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS26975 faed18197fb62b50c11f5276a187d449 218 PANTHER PTHR18895 54 190 2.7E-20 T 13-09-2016 PMA3_RS26975 faed18197fb62b50c11f5276a187d449 218 SUPERFAMILY SSF53335 54 176 6.07E-22 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 Pfam PF03466 LysR substrate binding domain 91 291 2.0E-28 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.8E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.8E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.8E-11 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 SUPERFAMILY SSF53850 93 295 1.12E-30 T 13-09-2016 PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 Gene3D G3DSA:1.10.10.10 3 83 3.3E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 1.1E-20 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 Gene3D G3DSA:3.40.190.10 179 261 8.3E-19 T 13-09-2016 PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 Gene3D G3DSA:3.40.190.10 96 178 2.8E-22 T 13-09-2016 PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 PANTHER PTHR30537 1 294 2.6E-90 T 13-09-2016 PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 SUPERFAMILY SSF46785 6 82 5.83E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS26390 63ace3bf85a4f4bf3ec6294aacefbf44 296 PANTHER PTHR30537:SF26 1 294 2.6E-90 T 13-09-2016 PMA3_RS16870 cf5ca6eeaa7108109f34721d80a36203 146 Gene3D G3DSA:3.30.300.20 53 142 5.8E-26 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS16870 cf5ca6eeaa7108109f34721d80a36203 146 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 23 142 3.2E-28 T 13-09-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 PMA3_RS16870 cf5ca6eeaa7108109f34721d80a36203 146 PANTHER PTHR33797:SF3 2 142 1.2E-35 T 13-09-2016 PMA3_RS16870 cf5ca6eeaa7108109f34721d80a36203 146 Pfam PF02566 OsmC-like protein 49 141 3.0E-13 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS16870 cf5ca6eeaa7108109f34721d80a36203 146 SUPERFAMILY SSF82784 23 142 1.96E-25 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS16870 cf5ca6eeaa7108109f34721d80a36203 146 PANTHER PTHR33797 2 142 1.2E-35 T 13-09-2016 PMA3_RS17070 69157305f701c0ce94bc4d4bd0794ca5 338 PANTHER PTHR38457 1 338 1.4E-36 T 13-09-2016 PMA3_RS17070 69157305f701c0ce94bc4d4bd0794ca5 338 Pfam PF05145 Putative ammonia monooxygenase 26 331 1.1E-47 T 13-09-2016 IPR007820 AbrB family GO:0010468|GO:0016021 PMA3_RS17070 69157305f701c0ce94bc4d4bd0794ca5 338 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 177 331 1.6E-29 T 13-09-2016 IPR017516 AbrB duplication PMA3_RS17070 69157305f701c0ce94bc4d4bd0794ca5 338 PIRSF PIRSF038991 1 337 1.4E-46 T 13-09-2016 IPR007820 AbrB family GO:0010468|GO:0016021 PMA3_RS17070 69157305f701c0ce94bc4d4bd0794ca5 338 PANTHER PTHR38457:SF1 1 338 1.4E-36 T 13-09-2016 PMA3_RS01045 cb78081d99f43b37a743de068333c422 263 PANTHER PTHR30269:SF0 1 253 9.9E-71 T 13-09-2016 PMA3_RS01045 cb78081d99f43b37a743de068333c422 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 244 8.3E-46 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS01045 cb78081d99f43b37a743de068333c422 263 PANTHER PTHR30269 1 253 9.9E-71 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS26560 79441a7e5ca7199ba5da30cc74109acd 215 PIRSF PIRSF016262 2 213 1.1E-58 T 13-09-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PMA3_RS26560 79441a7e5ca7199ba5da30cc74109acd 215 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 6.0E-23 T 13-09-2016 PMA3_RS26560 79441a7e5ca7199ba5da30cc74109acd 215 PANTHER PTHR10993 7 205 4.8E-75 T 13-09-2016 PMA3_RS26560 79441a7e5ca7199ba5da30cc74109acd 215 SUPERFAMILY SSF55681 7 204 1.99E-66 T 13-09-2016 PMA3_RS26560 79441a7e5ca7199ba5da30cc74109acd 215 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 200 2.6E-63 T 13-09-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PMA3_RS26560 79441a7e5ca7199ba5da30cc74109acd 215 Pfam PF03099 Biotin/lipoate A/B protein ligase family 61 158 2.4E-6 T 13-09-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 PMA3_RS26560 79441a7e5ca7199ba5da30cc74109acd 215 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 13-09-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PMA3_RS26560 79441a7e5ca7199ba5da30cc74109acd 215 Gene3D G3DSA:3.90.1550.10 7 202 7.4E-69 T 13-09-2016 PMA3_RS26560 79441a7e5ca7199ba5da30cc74109acd 215 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 37.727 T 13-09-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 PANTHER PTHR32303 134 526 3.7E-264 T 13-09-2016 PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 PANTHER PTHR32303 594 801 3.7E-264 T 13-09-2016 PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 SUPERFAMILY SSF50998 167 540 1.7E-152 T 13-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 SUPERFAMILY SSF50998 575 801 1.7E-152 T 13-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 SMART SM00564 427 477 210.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 SMART SM00564 500 531 560.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 SMART SM00564 358 399 0.42 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 SMART SM00564 225 256 2.0E-5 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 SMART SM00564 301 333 55.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 SMART SM00564 724 757 2.0 T 13-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 PANTHER PTHR32303:SF4 134 526 3.7E-264 T 13-09-2016 PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 PANTHER PTHR32303:SF4 594 801 3.7E-264 T 13-09-2016 PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 16 801 0.0 T 13-09-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 Pfam PF13360 PQQ-like domain 683 769 8.4E-5 T 13-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 Pfam PF13360 PQQ-like domain 239 525 6.2E-12 T 13-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 Gene3D G3DSA:2.140.10.10 586 802 1.8E-159 T 13-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PMA3_RS24030 b7ba97bb73c87137a0eb50f1d8406422 803 Gene3D G3DSA:2.140.10.10 165 552 1.8E-159 T 13-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PMA3_RS05455 3430fc503912f8ed0ab329dedf67879d 385 SUPERFAMILY SSF111369 48 284 6.41E-93 T 13-09-2016 PMA3_RS05455 3430fc503912f8ed0ab329dedf67879d 385 PANTHER PTHR30158:SF3 1 385 4.5E-160 T 13-09-2016 PMA3_RS05455 3430fc503912f8ed0ab329dedf67879d 385 Gene3D G3DSA:2.40.50.100 62 95 3.6E-26 T 13-09-2016 PMA3_RS05455 3430fc503912f8ed0ab329dedf67879d 385 Gene3D G3DSA:2.40.50.100 156 190 3.6E-26 T 13-09-2016 PMA3_RS05455 3430fc503912f8ed0ab329dedf67879d 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 359 2.3E-76 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS05455 3430fc503912f8ed0ab329dedf67879d 385 PANTHER PTHR30158 1 385 4.5E-160 T 13-09-2016 PMA3_RS05455 3430fc503912f8ed0ab329dedf67879d 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 277 3.5E-15 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS05455 3430fc503912f8ed0ab329dedf67879d 385 Pfam PF00529 HlyD membrane-fusion protein of T1SS 37 344 6.7E-9 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS26930 d2d66bd04cd8a77010bb2ab2ef793c49 167 SUPERFAMILY SSF101307 17 162 6.28E-47 T 13-09-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 PMA3_RS26930 d2d66bd04cd8a77010bb2ab2ef793c49 167 PIRSF PIRSF006162 15 167 6.7E-50 T 13-09-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 PMA3_RS26930 d2d66bd04cd8a77010bb2ab2ef793c49 167 Pfam PF04608 Phosphatidylglycerophosphatase A 23 160 8.6E-53 T 13-09-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 PMA3_RS26930 d2d66bd04cd8a77010bb2ab2ef793c49 167 PANTHER PTHR36305 8 167 6.0E-65 T 13-09-2016 PMA3_RS27170 fdecd90dd317815c362f23b0aa5b856a 145 PANTHER PTHR12934 1 145 2.2E-65 T 13-09-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 PMA3_RS27170 fdecd90dd317815c362f23b0aa5b856a 145 Gene3D G3DSA:3.100.10.10 32 144 3.3E-22 T 13-09-2016 PMA3_RS27170 fdecd90dd317815c362f23b0aa5b856a 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.3E-26 T 13-09-2016 IPR021131 Ribosomal protein L18e/L15P PMA3_RS27170 fdecd90dd317815c362f23b0aa5b856a 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 17.582 T 13-09-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 PMA3_RS27170 fdecd90dd317815c362f23b0aa5b856a 145 SUPERFAMILY SSF52080 4 143 1.02E-41 T 13-09-2016 IPR021131 Ribosomal protein L18e/L15P PMA3_RS27170 fdecd90dd317815c362f23b0aa5b856a 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.7E-42 T 13-09-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 454 3.0E-18 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 SMART SM00388 238 303 3.0E-16 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 Pfam PF00672 HAMP domain 170 233 6.2E-7 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 Gene3D G3DSA:3.30.565.10 292 453 7.2E-37 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 Gene3D G3DSA:1.10.287.130 228 291 4.8E-14 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 Pfam PF08521 Two-component sensor kinase N-terminal 19 161 1.1E-10 T 13-09-2016 IPR013727 Two-component sensor kinase, N-terminal PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 301 1.4E-13 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 SMART SM00387 349 455 3.8E-27 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 4.5E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 4.5E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 4.5E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 4.5E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 SUPERFAMILY SSF47384 221 303 4.9E-18 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 PANTHER PTHR24423 144 152 1.4E-68 T 13-09-2016 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 PANTHER PTHR24423 179 453 1.4E-68 T 13-09-2016 PMA3_RS12975 004ecbcd64e7469b83a1c09fb78b8d57 455 SUPERFAMILY SSF55874 292 453 1.83E-39 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS28160 63ae04ae2d765dbca30b65c9e6553ea3 727 PANTHER PTHR30509:SF8 5 688 2.3E-299 T 13-09-2016 PMA3_RS28160 63ae04ae2d765dbca30b65c9e6553ea3 727 Pfam PF12805 FUSC-like inner membrane protein yccS 70 355 1.7E-114 T 13-09-2016 IPR032692 Integral membrane protein YccS, N-terminal PMA3_RS28160 63ae04ae2d765dbca30b65c9e6553ea3 727 PANTHER PTHR30509 5 688 2.3E-299 T 13-09-2016 PMA3_RS28160 63ae04ae2d765dbca30b65c9e6553ea3 727 Pfam PF13515 Fusaric acid resistance protein-like 413 530 5.9E-19 T 13-09-2016 PMA3_RS28160 63ae04ae2d765dbca30b65c9e6553ea3 727 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 719 7.1E-280 T 13-09-2016 IPR010020 Integral membrane protein, YccS/YhfK PMA3_RS28160 63ae04ae2d765dbca30b65c9e6553ea3 727 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 14 717 9.8E-231 T 13-09-2016 IPR010019 Integral membrane protein, YccS PMA3_RS20845 8e68d91171d78f8febbcd4730557e07d 111 Pfam PF12836 Helix-hairpin-helix motif 47 108 3.8E-23 T 13-09-2016 PMA3_RS20845 8e68d91171d78f8febbcd4730557e07d 111 PANTHER PTHR21180 47 111 6.5E-21 T 13-09-2016 PMA3_RS20845 8e68d91171d78f8febbcd4730557e07d 111 SUPERFAMILY SSF47781 35 110 7.23E-27 T 13-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PMA3_RS20845 8e68d91171d78f8febbcd4730557e07d 111 Gene3D G3DSA:1.10.150.320 37 109 5.7E-19 T 13-09-2016 PMA3_RS20845 8e68d91171d78f8febbcd4730557e07d 111 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 47 110 5.1E-23 T 13-09-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain PMA3_RS04880 f0d9dac3993496669da8e97fc280a606 146 SUPERFAMILY SSF54637 1 142 2.28E-52 T 13-09-2016 IPR029069 HotDog domain PMA3_RS04880 f0d9dac3993496669da8e97fc280a606 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 145 35.928 T 13-09-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PMA3_RS04880 f0d9dac3993496669da8e97fc280a606 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 142 8.7E-64 T 13-09-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PMA3_RS04880 f0d9dac3993496669da8e97fc280a606 146 PANTHER PTHR30272 1 146 1.1E-81 T 13-09-2016 PMA3_RS04880 f0d9dac3993496669da8e97fc280a606 146 Pfam PF07977 FabA-like domain 11 137 6.2E-39 T 13-09-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PMA3_RS04880 f0d9dac3993496669da8e97fc280a606 146 Gene3D G3DSA:3.10.129.10 1 142 3.3E-59 T 13-09-2016 IPR029069 HotDog domain PMA3_RS16405 17c8666f951ae157210cf132ac7cda54 462 PANTHER PTHR13932:SF6 1 457 1.2E-212 T 13-09-2016 PMA3_RS16405 17c8666f951ae157210cf132ac7cda54 462 SUPERFAMILY SSF102114 8 450 1.29E-134 T 13-09-2016 PMA3_RS16405 17c8666f951ae157210cf132ac7cda54 462 PANTHER PTHR13932 1 457 1.2E-212 T 13-09-2016 PMA3_RS16405 17c8666f951ae157210cf132ac7cda54 462 Pfam PF06969 HemN C-terminal domain 369 435 1.6E-8 T 13-09-2016 IPR010723 HemN, C-terminal PMA3_RS16405 17c8666f951ae157210cf132ac7cda54 462 SMART SM00729 55 278 6.7E-53 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS16405 17c8666f951ae157210cf132ac7cda54 462 Gene3D G3DSA:3.80.30.20 55 288 4.5E-30 T 13-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe PMA3_RS16405 17c8666f951ae157210cf132ac7cda54 462 Pfam PF04055 Radical SAM superfamily 60 231 7.0E-18 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS16405 17c8666f951ae157210cf132ac7cda54 462 PIRSF PIRSF000167 6 462 9.8E-163 T 13-09-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 PMA3_RS16405 17c8666f951ae157210cf132ac7cda54 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 462 2.4E-179 T 13-09-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 PMA3_RS12375 85cae0bc677e849618283867556334b3 463 PANTHER PTHR30354:SF7 1 463 3.4E-249 T 13-09-2016 PMA3_RS12375 85cae0bc677e849618283867556334b3 463 PANTHER PTHR30354 1 463 3.4E-249 T 13-09-2016 PMA3_RS10030 54f4ab7a7d9181eac9a011296a99d7d4 342 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 38 320 1.2E-51 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS10030 54f4ab7a7d9181eac9a011296a99d7d4 342 SUPERFAMILY SSF53850 33 335 2.71E-83 T 13-09-2016 PMA3_RS10030 54f4ab7a7d9181eac9a011296a99d7d4 342 Gene3D G3DSA:3.40.190.100 123 270 1.1E-50 T 13-09-2016 PMA3_RS10030 54f4ab7a7d9181eac9a011296a99d7d4 342 Gene3D G3DSA:3.40.190.10 31 120 8.9E-39 T 13-09-2016 PMA3_RS10030 54f4ab7a7d9181eac9a011296a99d7d4 342 Gene3D G3DSA:3.40.190.10 271 335 8.9E-39 T 13-09-2016 PMA3_RS03380 54fa7c8425bb7e5092a1f51a44c5b770 229 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 4 208 5.2E-17 T 13-09-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 PMA3_RS29170 c9731675029377442cda452a494475ad 151 PANTHER PTHR35146 1 151 5.1E-47 T 13-09-2016 PMA3_RS29170 c9731675029377442cda452a494475ad 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 146 2.3E-41 T 13-09-2016 IPR003791 Protein of unknown function UPF0178 PMA3_RS29170 c9731675029377442cda452a494475ad 151 PANTHER PTHR35146:SF1 1 151 5.1E-47 T 13-09-2016 PMA3_RS29170 c9731675029377442cda452a494475ad 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.964 T 13-09-2016 IPR003791 Protein of unknown function UPF0178 PMA3_RS02690 4ded45fad9aac5553e9b2dfa91b75478 253 Pfam PF02698 DUF218 domain 81 236 4.6E-27 T 13-09-2016 IPR003848 Domain of unknown function DUF218 PMA3_RS02690 4ded45fad9aac5553e9b2dfa91b75478 253 PANTHER PTHR30336 1 253 2.8E-48 T 13-09-2016 PMA3_RS02690 4ded45fad9aac5553e9b2dfa91b75478 253 Gene3D G3DSA:3.40.50.620 78 212 2.9E-34 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS02690 4ded45fad9aac5553e9b2dfa91b75478 253 PANTHER PTHR30336:SF1 1 253 2.8E-48 T 13-09-2016 PMA3_RS00760 a7f5cd667140a70b09845ce46c423de2 277 PANTHER PTHR30151 21 275 1.1E-107 T 13-09-2016 PMA3_RS00760 a7f5cd667140a70b09845ce46c423de2 277 PANTHER PTHR30151:SF0 21 275 1.1E-107 T 13-09-2016 PMA3_RS00760 a7f5cd667140a70b09845ce46c423de2 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 268 1.6E-22 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00760 a7f5cd667140a70b09845ce46c423de2 277 Gene3D G3DSA:1.10.3720.10 75 271 3.1E-28 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00760 a7f5cd667140a70b09845ce46c423de2 277 SUPERFAMILY SSF161098 75 259 1.7E-36 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS07400 eede5e5ba6651d71a4b748edc7c39e9e 196 Gene3D G3DSA:3.40.30.10 1 196 3.5E-66 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07400 eede5e5ba6651d71a4b748edc7c39e9e 196 PIRSF PIRSF006386 1 196 1.5E-65 T 13-09-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa PMA3_RS07400 eede5e5ba6651d71a4b748edc7c39e9e 196 PANTHER PTHR13887:SF22 1 195 1.0E-71 T 13-09-2016 PMA3_RS07400 eede5e5ba6651d71a4b748edc7c39e9e 196 SUPERFAMILY SSF52833 1 195 2.21E-48 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07400 eede5e5ba6651d71a4b748edc7c39e9e 196 PANTHER PTHR13887 1 195 1.0E-71 T 13-09-2016 PMA3_RS07400 eede5e5ba6651d71a4b748edc7c39e9e 196 Pfam PF01323 DSBA-like thioredoxin domain 4 195 6.1E-43 T 13-09-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 SUPERFAMILY SSF51604 95 357 8.12E-79 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 Pfam PF13378 Enolase C-terminal domain-like 129 355 2.4E-62 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 Gene3D G3DSA:3.20.20.120 119 343 3.8E-86 T 13-09-2016 IPR029065 Enolase C-terminal domain-like PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 Gene3D G3DSA:3.30.390.10 1 118 6.2E-53 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 SUPERFAMILY SSF54826 1 112 9.43E-31 T 13-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 SMART SM00922 125 230 1.4E-23 T 13-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 6.7E-27 T 13-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 PANTHER PTHR13794:SF4 1 382 2.8E-144 T 13-09-2016 PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 13-09-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 PANTHER PTHR13794 1 382 2.8E-144 T 13-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PMA3_RS06755 23528e232358247fb7594e0ad82f5dfc 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 13-09-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PMA3_RS06625 ffc9c3e8c260f3202bb33ab252e7cfc9 674 Gene3D G3DSA:1.10.443.10 318 485 1.3E-19 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS06625 ffc9c3e8c260f3202bb33ab252e7cfc9 674 Pfam PF00589 Phage integrase family 323 482 1.2E-12 T 13-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS06625 ffc9c3e8c260f3202bb33ab252e7cfc9 674 SUPERFAMILY SSF56349 307 492 1.03E-22 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS09305 04a8a546201d9b88ce0f8f289365c7ed 325 PANTHER PTHR32196 20 324 2.9E-111 T 13-09-2016 PMA3_RS09305 04a8a546201d9b88ce0f8f289365c7ed 325 PANTHER PTHR32196:SF35 20 324 2.9E-111 T 13-09-2016 PMA3_RS09305 04a8a546201d9b88ce0f8f289365c7ed 325 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 311 5.5E-46 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS11290 0abd33fb56d906a896e8f975472aee89 308 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 3 135 7.1E-32 T 13-09-2016 IPR017748 Type VI secretion system-associated, BMAA0400 PMA3_RS11290 0abd33fb56d906a896e8f975472aee89 308 Gene3D G3DSA:3.40.1730.10 2 165 5.5E-26 T 13-09-2016 PMA3_RS11290 0abd33fb56d906a896e8f975472aee89 308 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 3 124 2.5E-21 T 13-09-2016 IPR017748 Type VI secretion system-associated, BMAA0400 PMA3_RS01515 ba6bc7788c0cc2a31f8a195d0d1f83a3 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 356 42.642 T 13-09-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS01515 ba6bc7788c0cc2a31f8a195d0d1f83a3 366 SUPERFAMILY SSF56796 4 354 5.36E-117 T 13-09-2016 PMA3_RS01515 ba6bc7788c0cc2a31f8a195d0d1f83a3 366 Gene3D G3DSA:1.20.1090.10 171 354 1.3E-64 T 13-09-2016 PMA3_RS01515 ba6bc7788c0cc2a31f8a195d0d1f83a3 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 351 1.5E-114 T 13-09-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS01515 ba6bc7788c0cc2a31f8a195d0d1f83a3 366 Pfam PF01761 3-dehydroquinate synthase 65 323 2.3E-106 T 13-09-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS01515 ba6bc7788c0cc2a31f8a195d0d1f83a3 366 PIRSF PIRSF001455 4 360 1.4E-103 T 13-09-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PMA3_RS01515 ba6bc7788c0cc2a31f8a195d0d1f83a3 366 PANTHER PTHR21090 1 359 3.7E-199 T 13-09-2016 PMA3_RS01515 ba6bc7788c0cc2a31f8a195d0d1f83a3 366 Gene3D G3DSA:3.40.50.1970 2 170 2.4E-67 T 13-09-2016 PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 273 330 5.4E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 SUPERFAMILY SSF55874 338 481 7.33E-32 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 SMART SM00388 273 337 5.9E-8 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 Gene3D G3DSA:3.30.565.10 339 484 2.0E-30 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 SMART SM00387 378 485 1.2E-24 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 8.7E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 8.7E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 8.7E-11 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 PANTHER PTHR24423 271 484 1.2E-39 T 13-09-2016 PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 PANTHER PTHR24423 1 7 1.2E-39 T 13-09-2016 PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 483 9.9E-19 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 Gene3D G3DSA:1.10.287.130 274 330 1.6E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS17525 40aae2fa07912663f58853c6c0bbb5bc 498 SUPERFAMILY SSF47384 269 333 4.12E-10 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS10095 5d40a671425d6f78f41bf185f444b937 221 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 47 80 7.4E-6 T 13-09-2016 IPR002654 Glycosyl transferase, family 25 PMA3_RS10520 4f3daf59ca1558759fa7bd3c5273ac5f 338 SUPERFAMILY SSF81345 2 331 2.88E-77 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS10520 4f3daf59ca1558759fa7bd3c5273ac5f 338 Pfam PF01032 FecCD transport family 15 332 1.0E-89 T 13-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PMA3_RS10520 4f3daf59ca1558759fa7bd3c5273ac5f 338 PANTHER PTHR30472 1 338 1.6E-94 T 13-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PMA3_RS10520 4f3daf59ca1558759fa7bd3c5273ac5f 338 Gene3D G3DSA:1.10.3470.10 3 336 8.2E-103 T 13-09-2016 IPR029022 ABC transporter, BtuC-like PMA3_RS04630 dd1a2575dac7b813563c6a3df71b6ca3 425 SMART SM01154 35 413 5.3E-183 T 13-09-2016 IPR012548 Protein of unknown function DUF1704 PMA3_RS04630 dd1a2575dac7b813563c6a3df71b6ca3 425 Pfam PF08014 Domain of unknown function (DUF1704) 37 410 8.8E-132 T 13-09-2016 IPR012548 Protein of unknown function DUF1704 PMA3_RS04630 dd1a2575dac7b813563c6a3df71b6ca3 425 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 16 406 5.7E-135 T 13-09-2016 IPR012656 Conserved hypothetical protein CHP02421, QEGLA PMA3_RS14530 24a80a7f22dbb84bb4652e12fceccc42 97 SUPERFAMILY SSF54909 1 96 4.54E-25 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS14530 24a80a7f22dbb84bb4652e12fceccc42 97 PANTHER PTHR33336 1 82 1.4E-16 T 13-09-2016 PMA3_RS14530 24a80a7f22dbb84bb4652e12fceccc42 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 77 4.2E-18 T 13-09-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PMA3_RS14530 24a80a7f22dbb84bb4652e12fceccc42 97 Gene3D G3DSA:3.30.70.900 2 95 1.1E-26 T 13-09-2016 PMA3_RS09375 0c5e215bbf7c050251ac0db83db3960c 338 SUPERFAMILY SSF46589 13 99 4.87E-23 T 13-09-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PMA3_RS09375 0c5e215bbf7c050251ac0db83db3960c 338 SUPERFAMILY SSF55681 92 338 1.93E-81 T 13-09-2016 PMA3_RS09375 0c5e215bbf7c050251ac0db83db3960c 338 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 4.8E-26 T 13-09-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PMA3_RS09375 0c5e215bbf7c050251ac0db83db3960c 338 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 337 8.3E-109 T 13-09-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PMA3_RS09375 0c5e215bbf7c050251ac0db83db3960c 338 Gene3D G3DSA:3.30.930.10 9 338 6.2E-133 T 13-09-2016 PMA3_RS09375 0c5e215bbf7c050251ac0db83db3960c 338 PANTHER PTHR11538 92 338 5.3E-109 T 13-09-2016 PMA3_RS09375 0c5e215bbf7c050251ac0db83db3960c 338 Pfam PF01409 tRNA synthetases class II core domain (F) 92 337 7.2E-109 T 13-09-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 PMA3_RS09375 0c5e215bbf7c050251ac0db83db3960c 338 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 337 50.872 T 13-09-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 PMA3_RS14735 e7a15743942326a68afd6d4e4c3d1535 221 Pfam PF04403 Paraquat-inducible protein A 46 201 7.2E-54 T 13-09-2016 IPR007498 Paraquat-inducible protein A PMA3_RS14735 e7a15743942326a68afd6d4e4c3d1535 221 PANTHER PTHR30462:SF3 30 213 4.0E-50 T 13-09-2016 PMA3_RS14735 e7a15743942326a68afd6d4e4c3d1535 221 PANTHER PTHR30462 30 213 4.0E-50 T 13-09-2016 PMA3_RS18870 38a157d45d2416c79458366d63e41ce8 267 Pfam PF01958 Domain of unknown function DUF108 168 255 4.3E-31 T 13-09-2016 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21|UniPathway: UPA00253 PMA3_RS18870 38a157d45d2416c79458366d63e41ce8 267 SUPERFAMILY SSF55347 124 237 3.79E-30 T 13-09-2016 PMA3_RS18870 38a157d45d2416c79458366d63e41ce8 267 SUPERFAMILY SSF51735 1 153 5.38E-17 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18870 38a157d45d2416c79458366d63e41ce8 267 Gene3D G3DSA:3.40.50.720 2 115 6.1E-7 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18870 38a157d45d2416c79458366d63e41ce8 267 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 119 2.3E-22 T 13-09-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PMA3_RS18870 38a157d45d2416c79458366d63e41ce8 267 Hamap MF_01265 Probable L-aspartate dehydrogenase [nadX]. 1 267 35.618 T 13-09-2016 IPR020626 L-aspartate dehydrogenase, prokaryotic GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21|UniPathway: UPA00253 PMA3_RS18870 38a157d45d2416c79458366d63e41ce8 267 Gene3D G3DSA:3.30.360.10 124 237 1.2E-35 T 13-09-2016 PMA3_RS18870 38a157d45d2416c79458366d63e41ce8 267 PANTHER PTHR31873 1 265 1.8E-72 T 13-09-2016 PMA3_RS18870 38a157d45d2416c79458366d63e41ce8 267 PIRSF PIRSF005227 1 267 1.6E-89 T 13-09-2016 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21|UniPathway: UPA00253 PMA3_RS27920 4b6452fa47d2641a203ddbfca5a20b3e 98 Gene3D G3DSA:3.40.50.720 10 88 1.1E-16 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27920 4b6452fa47d2641a203ddbfca5a20b3e 98 PANTHER PTHR11695:SF586 10 87 2.2E-17 T 13-09-2016 PMA3_RS27920 4b6452fa47d2641a203ddbfca5a20b3e 98 SUPERFAMILY SSF51735 10 97 1.42E-17 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS27920 4b6452fa47d2641a203ddbfca5a20b3e 98 PANTHER PTHR11695 10 87 2.2E-17 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS24370 b91d8222e9df92d1b73002ede01a62ad 158 PIRSF PIRSF000216 3 158 1.3E-41 T 13-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 PMA3_RS24370 b91d8222e9df92d1b73002ede01a62ad 158 SUPERFAMILY SSF52833 9 156 8.16E-44 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS24370 b91d8222e9df92d1b73002ede01a62ad 158 Gene3D G3DSA:3.40.30.10 75 153 2.2E-6 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS24370 b91d8222e9df92d1b73002ede01a62ad 158 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 12 154 1.8E-39 T 13-09-2016 PMA3_RS24370 b91d8222e9df92d1b73002ede01a62ad 158 PANTHER PTHR10371 10 158 4.1E-39 T 13-09-2016 PMA3_RS04450 3593bc83f429636ef14b2056834de4a2 270 Pfam PF01578 Cytochrome C assembly protein 43 267 6.8E-37 T 13-09-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PMA3_RS04450 3593bc83f429636ef14b2056834de4a2 270 PANTHER PTHR38034 8 269 4.0E-80 T 13-09-2016 PMA3_RS10170 37f33fe6c2ae37b26ad0a68bc323e4af 431 PANTHER PTHR11662 8 415 2.3E-137 T 13-09-2016 PMA3_RS10170 37f33fe6c2ae37b26ad0a68bc323e4af 431 SUPERFAMILY SSF103473 4 418 7.59E-79 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS10170 37f33fe6c2ae37b26ad0a68bc323e4af 431 Pfam PF07690 Major Facilitator Superfamily 20 383 6.2E-45 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS10170 37f33fe6c2ae37b26ad0a68bc323e4af 431 PANTHER PTHR11662:SF3 8 415 2.3E-137 T 13-09-2016 PMA3_RS10170 37f33fe6c2ae37b26ad0a68bc323e4af 431 Gene3D G3DSA:1.20.1250.20 233 416 3.8E-15 T 13-09-2016 PMA3_RS10170 37f33fe6c2ae37b26ad0a68bc323e4af 431 Gene3D G3DSA:1.20.1250.20 12 211 1.5E-44 T 13-09-2016 PMA3_RS25055 d32976c70fedf596fc66f5c719e4acc1 101 Pfam PF13466 STAS domain 16 94 9.0E-14 T 13-09-2016 IPR002645 STAS domain PMA3_RS25055 d32976c70fedf596fc66f5c719e4acc1 101 Gene3D G3DSA:3.30.750.24 9 98 3.0E-14 T 13-09-2016 IPR002645 STAS domain PMA3_RS25055 d32976c70fedf596fc66f5c719e4acc1 101 SUPERFAMILY SSF52091 1 98 1.24E-15 T 13-09-2016 IPR002645 STAS domain PMA3_RS08085 b022c56096bd6671496e8d59d4ca123e 299 PANTHER PTHR30293:SF2 2 299 1.6E-77 T 13-09-2016 PMA3_RS08085 b022c56096bd6671496e8d59d4ca123e 299 Pfam PF03466 LysR substrate binding domain 94 276 7.5E-14 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS08085 b022c56096bd6671496e8d59d4ca123e 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.9E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS08085 b022c56096bd6671496e8d59d4ca123e 299 SUPERFAMILY SSF46785 2 86 6.71E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08085 b022c56096bd6671496e8d59d4ca123e 299 Gene3D G3DSA:1.10.10.10 1 76 2.5E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS08085 b022c56096bd6671496e8d59d4ca123e 299 SUPERFAMILY SSF53850 87 291 3.62E-28 T 13-09-2016 PMA3_RS08085 b022c56096bd6671496e8d59d4ca123e 299 Gene3D G3DSA:3.40.190.10 201 253 4.9E-8 T 13-09-2016 PMA3_RS08085 b022c56096bd6671496e8d59d4ca123e 299 Gene3D G3DSA:3.40.190.10 82 200 1.0E-4 T 13-09-2016 PMA3_RS08085 b022c56096bd6671496e8d59d4ca123e 299 PANTHER PTHR30293 2 299 1.6E-77 T 13-09-2016 PMA3_RS28095 013154085645f25d00c52751db992fff 315 PANTHER PTHR30177 7 289 2.4E-138 T 13-09-2016 PMA3_RS28095 013154085645f25d00c52751db992fff 315 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 21 313 7.3E-146 T 13-09-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 PMA3_RS28095 013154085645f25d00c52751db992fff 315 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 28 285 1.8E-52 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS28095 013154085645f25d00c52751db992fff 315 SUPERFAMILY SSF53850 22 301 5.21E-81 T 13-09-2016 PMA3_RS28095 013154085645f25d00c52751db992fff 315 PANTHER PTHR30177:SF6 7 289 2.4E-138 T 13-09-2016 PMA3_RS28095 013154085645f25d00c52751db992fff 315 Gene3D G3DSA:3.40.190.10 22 111 1.0E-44 T 13-09-2016 PMA3_RS28095 013154085645f25d00c52751db992fff 315 Gene3D G3DSA:3.40.190.10 236 301 1.0E-44 T 13-09-2016 PMA3_RS28095 013154085645f25d00c52751db992fff 315 Gene3D G3DSA:3.40.190.100 116 235 1.6E-18 T 13-09-2016 PMA3_RS29040 ceec4d609aaab9656e06453013f12a2e 186 SUPERFAMILY SSF101327 6 171 2.35E-43 T 13-09-2016 IPR011978 Uncharacterised protein family UPF0149 PMA3_RS29040 ceec4d609aaab9656e06453013f12a2e 186 Pfam PF03695 Uncharacterised protein family (UPF0149) 10 172 4.8E-31 T 13-09-2016 IPR011978 Uncharacterised protein family UPF0149 PMA3_RS29040 ceec4d609aaab9656e06453013f12a2e 186 PANTHER PTHR37528 1 186 1.2E-29 T 13-09-2016 PMA3_RS29040 ceec4d609aaab9656e06453013f12a2e 186 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 4 184 28.291 T 13-09-2016 IPR011978 Uncharacterised protein family UPF0149 PMA3_RS16065 77bb4be81071cdab65d10bc262c7ce28 111 Pfam PF05717 IS66 Orf2 like protein 6 102 1.1E-27 T 13-09-2016 IPR008878 Transposase IS66, Orf2 PMA3_RS16065 77bb4be81071cdab65d10bc262c7ce28 111 PANTHER PTHR36455 2 97 2.1E-15 T 13-09-2016 PMA3_RS16065 77bb4be81071cdab65d10bc262c7ce28 111 PANTHER PTHR36455:SF1 2 97 2.1E-15 T 13-09-2016 PMA3_RS09625 b31872af521d784ca1a249f453e4c268 160 Pfam PF05163 DinB family 1 142 2.6E-14 T 13-09-2016 IPR007837 DNA damage-inducible protein DinB PMA3_RS09625 b31872af521d784ca1a249f453e4c268 160 PANTHER PTHR37302:SF1 2 142 2.6E-13 T 13-09-2016 PMA3_RS09625 b31872af521d784ca1a249f453e4c268 160 PANTHER PTHR37302 2 142 2.6E-13 T 13-09-2016 PMA3_RS09625 b31872af521d784ca1a249f453e4c268 160 SUPERFAMILY SSF109854 7 141 2.38E-14 T 13-09-2016 PMA3_RS09625 b31872af521d784ca1a249f453e4c268 160 Gene3D G3DSA:1.20.120.450 1 142 3.3E-13 T 13-09-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase PMA3_RS26285 d31f8f4edbf1adfd0d9d3ce5a5a17c77 502 ProSitePatterns PS00571 Amidases signature. 178 209 - T 13-09-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS26285 d31f8f4edbf1adfd0d9d3ce5a5a17c77 502 Pfam PF01425 Amidase 47 480 3.5E-97 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS26285 d31f8f4edbf1adfd0d9d3ce5a5a17c77 502 PANTHER PTHR11895 12 497 1.1E-122 T 13-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS26285 d31f8f4edbf1adfd0d9d3ce5a5a17c77 502 Gene3D G3DSA:3.90.1300.10 23 496 1.7E-121 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS26285 d31f8f4edbf1adfd0d9d3ce5a5a17c77 502 SUPERFAMILY SSF75304 14 490 8.5E-115 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 SUPERFAMILY SSF52540 766 829 3.1E-34 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 SUPERFAMILY SSF52540 955 1156 3.1E-34 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1146 4.0E-67 T 13-09-2016 IPR003395 RecF/RecN/SMC, N-terminal PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 SUPERFAMILY SSF52540 1052 1138 1.75E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 SUPERFAMILY SSF52540 3 212 1.75E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 SMART SM00968 520 615 1.7E-9 T 13-09-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1155 22.883 T 13-09-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 Pfam PF06470 SMC proteins Flexible Hinge Domain 524 560 2.1E-5 T 13-09-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 Gene3D G3DSA:3.40.50.300 1046 1159 5.4E-72 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 Gene3D G3DSA:3.40.50.300 452 475 5.4E-72 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 Gene3D G3DSA:3.40.50.300 2 187 5.4E-72 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 PANTHER PTHR18937 2 1161 0.0 T 13-09-2016 PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1153 0.0 T 13-09-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 PANTHER PTHR18937:SF261 2 1161 0.0 T 13-09-2016 PMA3_RS20330 5bfcda18d66b1d18f2bc296c53687e7c 1162 SUPERFAMILY SSF75553 486 658 2.62E-7 T 13-09-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 PMA3_RS13085 2dca0691b4e0d8184918251149c85b59 144 PANTHER PTHR30353:SF12 4 143 3.8E-49 T 13-09-2016 PMA3_RS13085 2dca0691b4e0d8184918251149c85b59 144 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 40 114 0.006 T 13-09-2016 IPR020143 Uncharacterised protein family, RP436 PMA3_RS13085 2dca0691b4e0d8184918251149c85b59 144 Pfam PF09335 SNARE associated Golgi protein 27 136 2.7E-11 T 13-09-2016 IPR032816 SNARE associated Golgi protein PMA3_RS13085 2dca0691b4e0d8184918251149c85b59 144 PANTHER PTHR30353 4 143 3.8E-49 T 13-09-2016 IPR032818 DedA family PMA3_RS18305 9c55d3e0a90f4f5dd4eb1cb12e2a10e5 279 Pfam PF13452 N-terminal half of MaoC dehydratase 76 138 1.4E-5 T 13-09-2016 PMA3_RS18305 9c55d3e0a90f4f5dd4eb1cb12e2a10e5 279 SUPERFAMILY SSF54637 168 260 1.86E-12 T 13-09-2016 IPR029069 HotDog domain PMA3_RS18305 9c55d3e0a90f4f5dd4eb1cb12e2a10e5 279 PANTHER PTHR28152 16 279 3.8E-65 T 13-09-2016 PMA3_RS18305 9c55d3e0a90f4f5dd4eb1cb12e2a10e5 279 SUPERFAMILY SSF54637 40 153 4.7E-6 T 13-09-2016 IPR029069 HotDog domain PMA3_RS18305 9c55d3e0a90f4f5dd4eb1cb12e2a10e5 279 Gene3D G3DSA:3.10.129.10 136 256 9.3E-8 T 13-09-2016 IPR029069 HotDog domain PMA3_RS07205 4ce13c24b8f8153ff9d892c345fd601c 268 Pfam PF03476 MOSC N-terminal beta barrel domain 1 119 8.8E-25 T 13-09-2016 IPR005303 MOSC, N-terminal beta barrel PMA3_RS07205 4ce13c24b8f8153ff9d892c345fd601c 268 SUPERFAMILY SSF50800 2 49 8.89E-19 T 13-09-2016 IPR011037 Pyruvate kinase-like, insert domain PMA3_RS07205 4ce13c24b8f8153ff9d892c345fd601c 268 SUPERFAMILY SSF50800 152 267 8.89E-19 T 13-09-2016 IPR011037 Pyruvate kinase-like, insert domain PMA3_RS07205 4ce13c24b8f8153ff9d892c345fd601c 268 SUPERFAMILY SSF141673 4 132 7.59E-28 T 13-09-2016 PMA3_RS07205 4ce13c24b8f8153ff9d892c345fd601c 268 Pfam PF03473 MOSC domain 141 265 3.0E-32 T 13-09-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PMA3_RS07205 4ce13c24b8f8153ff9d892c345fd601c 268 PANTHER PTHR14237 3 268 1.5E-90 T 13-09-2016 PMA3_RS16890 0abdbb3f5db15f9f69b07b75e5e7ee9e 262 Pfam PF12146 Serine aminopeptidase, S33 99 176 6.7E-7 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS16890 0abdbb3f5db15f9f69b07b75e5e7ee9e 262 Pfam PF12146 Serine aminopeptidase, S33 197 250 5.1E-7 T 13-09-2016 IPR022742 Serine aminopeptidase, S33 PMA3_RS16890 0abdbb3f5db15f9f69b07b75e5e7ee9e 262 Gene3D G3DSA:3.40.50.1820 67 252 7.5E-31 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS16890 0abdbb3f5db15f9f69b07b75e5e7ee9e 262 SUPERFAMILY SSF53474 11 254 1.42E-34 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS16890 0abdbb3f5db15f9f69b07b75e5e7ee9e 262 PANTHER PTHR12277 19 255 3.7E-35 T 13-09-2016 PMA3_RS10255 57be9c6e1f33f46983b0b56a0308b4ee 297 PIRSF PIRSF001365 1 295 1.3E-66 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS10255 57be9c6e1f33f46983b0b56a0308b4ee 297 SMART SM01130 5 290 1.6E-74 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS10255 57be9c6e1f33f46983b0b56a0308b4ee 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 6.2E-7 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS10255 57be9c6e1f33f46983b0b56a0308b4ee 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 6.2E-7 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS10255 57be9c6e1f33f46983b0b56a0308b4ee 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 6.2E-7 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS10255 57be9c6e1f33f46983b0b56a0308b4ee 297 Gene3D G3DSA:3.20.20.70 2 295 4.4E-79 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS10255 57be9c6e1f33f46983b0b56a0308b4ee 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 13-09-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PMA3_RS10255 57be9c6e1f33f46983b0b56a0308b4ee 297 SUPERFAMILY SSF51569 3 288 5.76E-71 T 13-09-2016 PMA3_RS10255 57be9c6e1f33f46983b0b56a0308b4ee 297 PANTHER PTHR12128 1 293 5.4E-69 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS10255 57be9c6e1f33f46983b0b56a0308b4ee 297 Pfam PF00701 Dihydrodipicolinate synthetase family 6 287 2.0E-46 T 13-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PMA3_RS18315 cbc0d8d24189b821517f8cefa749e05a 449 PANTHER PTHR16943 4 441 7.7E-161 T 13-09-2016 IPR005656 MmgE/PrpD GO:0016829 PMA3_RS18315 cbc0d8d24189b821517f8cefa749e05a 449 Pfam PF03972 MmgE/PrpD family 4 439 1.0E-136 T 13-09-2016 IPR005656 MmgE/PrpD GO:0016829 PMA3_RS18315 cbc0d8d24189b821517f8cefa749e05a 449 PANTHER PTHR16943:SF8 4 441 7.7E-161 T 13-09-2016 PMA3_RS18315 cbc0d8d24189b821517f8cefa749e05a 449 SUPERFAMILY SSF103378 2 445 1.2E-119 T 13-09-2016 IPR005656 MmgE/PrpD GO:0016829 PMA3_RS18315 cbc0d8d24189b821517f8cefa749e05a 449 Gene3D G3DSA:3.30.1330.120 265 401 2.3E-26 T 13-09-2016 PMA3_RS16315 d3c6f6d15eae8cd3375ca3fbecbea95a 562 Gene3D G3DSA:2.140.10.20 276 553 2.2E-146 T 13-09-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain PMA3_RS16315 d3c6f6d15eae8cd3375ca3fbecbea95a 562 SUPERFAMILY SSF46626 14 153 1.23E-21 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16315 d3c6f6d15eae8cd3375ca3fbecbea95a 562 SUPERFAMILY SSF51004 137 562 2.88E-124 T 13-09-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PMA3_RS16315 d3c6f6d15eae8cd3375ca3fbecbea95a 562 Gene3D G3DSA:2.130.10.10 172 275 6.2E-7 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS16315 d3c6f6d15eae8cd3375ca3fbecbea95a 562 Gene3D G3DSA:1.10.760.10 21 132 9.5E-24 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16315 d3c6f6d15eae8cd3375ca3fbecbea95a 562 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 55 128 6.3E-9 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16315 d3c6f6d15eae8cd3375ca3fbecbea95a 562 Pfam PF02239 Cytochrome D1 heme domain 165 557 3.8E-159 T 13-09-2016 PMA3_RS09765 e38d542ea547d9178a3a7a5882d33eab 152 PANTHER PTHR13604 2 152 1.1E-32 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS09765 e38d542ea547d9178a3a7a5882d33eab 152 Gene3D G3DSA:3.90.1680.10 2 151 1.1E-39 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS09765 e38d542ea547d9178a3a7a5882d33eab 152 SUPERFAMILY SSF143081 2 152 7.59E-41 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS09765 e38d542ea547d9178a3a7a5882d33eab 152 Pfam PF02586 SOS response associated peptidase (SRAP) 2 141 1.2E-30 T 13-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 SUPERFAMILY SSF46785 1 85 1.43E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 SUPERFAMILY SSF53850 88 295 2.33E-37 T 13-09-2016 PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 Gene3D G3DSA:3.40.190.10 93 174 2.8E-14 T 13-09-2016 PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.6E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 Gene3D G3DSA:3.40.190.10 175 272 7.5E-30 T 13-09-2016 PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 PANTHER PTHR30346 1 295 5.2E-109 T 13-09-2016 PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 PANTHER PTHR30346:SF15 1 295 5.2E-109 T 13-09-2016 PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 Pfam PF03466 LysR substrate binding domain 88 295 1.5E-44 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS29600 ce1ed820eea200ba069c5edc4e2eee7d 309 Gene3D G3DSA:1.10.10.10 1 83 9.0E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17585 93a6676601aa4add012bbb9c8da88d70 129 Pfam PF10627 Curli assembly protein CsgE 26 128 5.5E-35 T 13-09-2016 IPR018900 Curli assembly protein CsgE PMA3_RS05260 111823566a1a10c06e5eef46f726a8a9 214 PANTHER PTHR10851:SF0 1 214 5.9E-112 T 13-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS05260 111823566a1a10c06e5eef46f726a8a9 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 43 122 1.7E-27 T 13-09-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS05260 111823566a1a10c06e5eef46f726a8a9 214 PANTHER PTHR10851 1 214 5.9E-112 T 13-09-2016 PMA3_RS05260 111823566a1a10c06e5eef46f726a8a9 214 Gene3D G3DSA:2.30.110.10 17 214 2.7E-83 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS05260 111823566a1a10c06e5eef46f726a8a9 214 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 214 38.717 T 13-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS05260 111823566a1a10c06e5eef46f726a8a9 214 PIRSF PIRSF000190 1 214 2.9E-81 T 13-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS05260 111823566a1a10c06e5eef46f726a8a9 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 5 214 1.1E-87 T 13-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS05260 111823566a1a10c06e5eef46f726a8a9 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 185 198 - T 13-09-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS05260 111823566a1a10c06e5eef46f726a8a9 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 175 214 5.2E-19 T 13-09-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PMA3_RS05260 111823566a1a10c06e5eef46f726a8a9 214 SUPERFAMILY SSF50475 13 214 1.2E-66 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS22030 a4a22000f8a5dd6fe6b4d27f4b9ba93a 297 SUPERFAMILY SSF53850 93 296 1.63E-36 T 13-09-2016 PMA3_RS22030 a4a22000f8a5dd6fe6b4d27f4b9ba93a 297 Gene3D G3DSA:3.40.190.10 93 195 4.0E-19 T 13-09-2016 PMA3_RS22030 a4a22000f8a5dd6fe6b4d27f4b9ba93a 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.2E-14 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS22030 a4a22000f8a5dd6fe6b4d27f4b9ba93a 297 PANTHER PTHR30126 6 290 1.1E-148 T 13-09-2016 PMA3_RS22030 a4a22000f8a5dd6fe6b4d27f4b9ba93a 297 PANTHER PTHR30126:SF16 6 290 1.1E-148 T 13-09-2016 PMA3_RS22030 a4a22000f8a5dd6fe6b4d27f4b9ba93a 297 SUPERFAMILY SSF46785 7 92 5.64E-17 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22030 a4a22000f8a5dd6fe6b4d27f4b9ba93a 297 Pfam PF03466 LysR substrate binding domain 92 294 3.5E-37 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS22030 a4a22000f8a5dd6fe6b4d27f4b9ba93a 297 Gene3D G3DSA:1.10.10.10 7 92 2.2E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS21580 7bb7f39c215defa00517088a2685accf 246 PANTHER PTHR30433:SF3 2 246 8.4E-115 T 13-09-2016 IPR022522 Flagellar motor stator, MotA PMA3_RS21580 7bb7f39c215defa00517088a2685accf 246 PANTHER PTHR30433 2 246 8.4E-115 T 13-09-2016 PMA3_RS21580 7bb7f39c215defa00517088a2685accf 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 219 1.0E-24 T 13-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PMA3_RS06995 c8ab085332f2351dac96c7104c03a0c1 113 SUPERFAMILY SSF47413 56 106 2.57E-9 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS06995 c8ab085332f2351dac96c7104c03a0c1 113 Gene3D G3DSA:3.40.1620.10 4 27 9.2E-5 T 13-09-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PMA3_RS06995 c8ab085332f2351dac96c7104c03a0c1 113 Gene3D G3DSA:1.10.260.40 56 107 7.1E-11 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS06995 c8ab085332f2351dac96c7104c03a0c1 113 Pfam PF01381 Helix-turn-helix 57 94 1.1E-8 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS14335 99184084592918e6d159a608661edaac 202 PANTHER PTHR30506 1 196 5.2E-42 T 13-09-2016 PMA3_RS14335 99184084592918e6d159a608661edaac 202 Pfam PF03458 UPF0126 domain 89 162 2.9E-13 T 13-09-2016 IPR005115 Uncharacterised domain UPF0126 PMA3_RS14335 99184084592918e6d159a608661edaac 202 Pfam PF03458 UPF0126 domain 6 77 1.1E-19 T 13-09-2016 IPR005115 Uncharacterised domain UPF0126 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PANTHER PTHR12737:SF13 157 299 2.5E-128 T 13-09-2016 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 SUPERFAMILY SSF55909 7 416 1.46E-135 T 13-09-2016 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 Gene3D G3DSA:3.75.10.10 4 71 4.0E-131 T 13-09-2016 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 Gene3D G3DSA:3.75.10.10 157 417 4.0E-131 T 13-09-2016 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PRINTS PR01466 Bacterial arginine deiminase signature 157 175 4.2E-51 T 13-09-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PRINTS PR01466 Bacterial arginine deiminase signature 372 386 4.2E-51 T 13-09-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PRINTS PR01466 Bacterial arginine deiminase signature 395 413 4.2E-51 T 13-09-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PRINTS PR01466 Bacterial arginine deiminase signature 185 200 4.2E-51 T 13-09-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PRINTS PR01466 Bacterial arginine deiminase signature 6 26 4.2E-51 T 13-09-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PRINTS PR01466 Bacterial arginine deiminase signature 352 369 4.2E-51 T 13-09-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 Hamap MF_00242 Arginine deiminase [arcA]. 5 416 47.877 T 13-09-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 Pfam PF02274 Amidinotransferase 22 413 2.1E-98 T 13-09-2016 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PANTHER PTHR12737 157 299 2.5E-128 T 13-09-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PANTHER PTHR12737 322 418 2.5E-128 T 13-09-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PANTHER PTHR12737 3 95 2.5E-128 T 13-09-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 TIGRFAM TIGR01078 arcA: arginine deiminase 10 416 9.1E-164 T 13-09-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PIRSF PIRSF006356 1 416 8.9E-142 T 13-09-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PANTHER PTHR12737:SF13 322 418 2.5E-128 T 13-09-2016 PMA3_RS14095 58f73dee5cdba7b2d55d285f1b4f4d91 418 PANTHER PTHR12737:SF13 3 95 2.5E-128 T 13-09-2016 PMA3_RS12390 7683d49c8a7c7ed17f1e63949b2df52c 340 PANTHER PTHR30325 1 339 9.4E-186 T 13-09-2016 PMA3_RS12390 7683d49c8a7c7ed17f1e63949b2df52c 340 SUPERFAMILY SSF161098 137 323 1.83E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12390 7683d49c8a7c7ed17f1e63949b2df52c 340 Gene3D G3DSA:1.10.3720.10 136 338 7.3E-21 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12390 7683d49c8a7c7ed17f1e63949b2df52c 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 339 3.6E-28 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS13660 fdbd950f55adf20d541c4e548e0c35ff 231 Pfam PF02678 Pirin 12 118 6.6E-36 T 13-09-2016 IPR003829 Pirin, N-terminal domain PMA3_RS13660 fdbd950f55adf20d541c4e548e0c35ff 231 SUPERFAMILY SSF51182 1 230 4.01E-72 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS13660 fdbd950f55adf20d541c4e548e0c35ff 231 PANTHER PTHR13903 1 230 6.6E-109 T 13-09-2016 IPR012093 Pirin PMA3_RS13660 fdbd950f55adf20d541c4e548e0c35ff 231 PANTHER PTHR13903:SF7 1 230 6.6E-109 T 13-09-2016 PMA3_RS13660 fdbd950f55adf20d541c4e548e0c35ff 231 Gene3D G3DSA:2.60.120.10 9 230 1.8E-65 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS13660 fdbd950f55adf20d541c4e548e0c35ff 231 PIRSF PIRSF006232 4 229 6.8E-53 T 13-09-2016 IPR012093 Pirin PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 PRINTS PR00298 60kDa chaperonin signature 398 419 5.7E-74 T 13-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 PRINTS PR00298 60kDa chaperonin signature 27 53 5.7E-74 T 13-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 PRINTS PR00298 60kDa chaperonin signature 83 110 5.7E-74 T 13-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 PRINTS PR00298 60kDa chaperonin signature 350 375 5.7E-74 T 13-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 PRINTS PR00298 60kDa chaperonin signature 268 291 5.7E-74 T 13-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-09-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.315 T 13-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 Gene3D G3DSA:3.50.7.10 189 366 1.2E-97 T 13-09-2016 IPR027409 GroEL-like apical domain PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 SUPERFAMILY SSF52029 184 376 1.79E-82 T 13-09-2016 IPR027409 GroEL-like apical domain PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 PANTHER PTHR11353 2 547 2.2E-251 T 13-09-2016 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 Gene3D G3DSA:1.10.560.10 3 188 3.1E-47 T 13-09-2016 IPR027413 GroEL-like equatorial domain PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 Gene3D G3DSA:1.10.560.10 367 518 2.0E-43 T 13-09-2016 IPR027413 GroEL-like equatorial domain PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.4E-253 T 13-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.7E-96 T 13-09-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 SUPERFAMILY SSF48592 406 521 4.66E-77 T 13-09-2016 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 SUPERFAMILY SSF48592 7 134 4.66E-77 T 13-09-2016 PMA3_RS23670 7ce2eab38017e747cd74d74b0359421b 547 SUPERFAMILY SSF54849 137 203 4.12E-24 T 13-09-2016 PMA3_RS29935 77283ee86d5aada9bdfbf67f8565fa2b 352 PANTHER PTHR10264 12 93 5.5E-14 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS29935 77283ee86d5aada9bdfbf67f8565fa2b 352 PANTHER PTHR10264 124 337 5.5E-14 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS29935 77283ee86d5aada9bdfbf67f8565fa2b 352 SMART SM00244 40 247 0.0036 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS29935 77283ee86d5aada9bdfbf67f8565fa2b 352 Pfam PF01145 SPFH domain / Band 7 family 44 264 1.5E-21 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS10930 31359482628657ac1b879fd76fb57c33 525 Gene3D G3DSA:3.30.70.270 363 523 1.3E-50 T 13-09-2016 PMA3_RS10930 31359482628657ac1b879fd76fb57c33 525 SMART SM00267 349 524 9.9E-60 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS10930 31359482628657ac1b879fd76fb57c33 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 356 523 4.3E-50 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS10930 31359482628657ac1b879fd76fb57c33 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 519 2.8E-46 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS10930 31359482628657ac1b879fd76fb57c33 525 SUPERFAMILY SSF55073 365 523 1.33E-45 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS10930 31359482628657ac1b879fd76fb57c33 525 Gene3D G3DSA:3.30.450.20 107 192 4.6E-16 T 13-09-2016 PMA3_RS10930 31359482628657ac1b879fd76fb57c33 525 PANTHER PTHR10799:SF750 267 519 5.3E-31 T 13-09-2016 PMA3_RS10930 31359482628657ac1b879fd76fb57c33 525 PANTHER PTHR10799 267 519 5.3E-31 T 13-09-2016 PMA3_RS10930 31359482628657ac1b879fd76fb57c33 525 Pfam PF02743 Cache domain 66 291 1.1E-17 T 13-09-2016 IPR033479 Double Cache domain 1 PMA3_RS10930 31359482628657ac1b879fd76fb57c33 525 Gene3D G3DSA:3.30.450.20 193 304 1.6E-9 T 13-09-2016 PMA3_RS23155 de2228642409e0c7b8c491df93790440 131 Pfam PF04304 Protein of unknown function (DUF454) 11 125 3.8E-33 T 13-09-2016 IPR007401 Protein of unknown function DUF454 PMA3_RS23155 de2228642409e0c7b8c491df93790440 131 PIRSF PIRSF016789 10 131 3.3E-29 T 13-09-2016 IPR007401 Protein of unknown function DUF454 PMA3_RS23155 de2228642409e0c7b8c491df93790440 131 PANTHER PTHR35813 1 125 4.0E-27 T 13-09-2016 PMA3_RS23155 de2228642409e0c7b8c491df93790440 131 PANTHER PTHR35813:SF1 1 125 4.0E-27 T 13-09-2016 PMA3_RS03850 df13017798545814e623e8435b6a0b2f 185 PANTHER PTHR22573 5 180 1.5E-55 T 13-09-2016 PMA3_RS03850 df13017798545814e623e8435b6a0b2f 185 SUPERFAMILY SSF53271 15 183 5.64E-45 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS03850 df13017798545814e623e8435b6a0b2f 185 Gene3D G3DSA:3.40.50.2020 7 183 6.7E-55 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS03850 df13017798545814e623e8435b6a0b2f 185 PANTHER PTHR22573:SF56 5 180 1.5E-55 T 13-09-2016 PMA3_RS03850 df13017798545814e623e8435b6a0b2f 185 Pfam PF00156 Phosphoribosyl transferase domain 21 151 1.1E-22 T 13-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PMA3_RS21155 d5111f15f900b00c81538ef8e2190894 234 Gene3D G3DSA:3.40.50.300 2 164 6.9E-41 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21155 d5111f15f900b00c81538ef8e2190894 234 SUPERFAMILY SSF52540 43 213 2.44E-26 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21155 d5111f15f900b00c81538ef8e2190894 234 PANTHER PTHR30050 1 232 5.3E-108 T 13-09-2016 PMA3_RS21155 d5111f15f900b00c81538ef8e2190894 234 Gene3D G3DSA:1.10.8.60 168 234 2.4E-29 T 13-09-2016 PMA3_RS21155 d5111f15f900b00c81538ef8e2190894 234 Pfam PF00308 Bacterial dnaA protein 15 212 3.3E-19 T 13-09-2016 IPR013317 Chromosomal replication initiator protein DnaA PMA3_RS21155 d5111f15f900b00c81538ef8e2190894 234 PANTHER PTHR30050:SF5 1 232 5.3E-108 T 13-09-2016 PMA3_RS21155 d5111f15f900b00c81538ef8e2190894 234 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 232 1.0E-86 T 13-09-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 PMA3_RS01695 a24803d75bb2bc0612fbd0cc0e8c9bf6 487 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 456 7.3E-156 T 13-09-2016 IPR003846 Uncharacterised protein family UPF0061 PMA3_RS01695 a24803d75bb2bc0612fbd0cc0e8c9bf6 487 PANTHER PTHR32057 1 487 9.0E-208 T 13-09-2016 PMA3_RS01695 a24803d75bb2bc0612fbd0cc0e8c9bf6 487 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 473 47.396 T 13-09-2016 IPR003846 Uncharacterised protein family UPF0061 PMA3_RS02205 175ce35b346756c0f821e426680a4f00 275 SUPERFAMILY SSF52402 24 273 8.15E-72 T 13-09-2016 PMA3_RS02205 175ce35b346756c0f821e426680a4f00 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 30 272 6.8E-64 T 13-09-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 PMA3_RS02205 175ce35b346756c0f821e426680a4f00 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 22 275 30.635 T 13-09-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 PMA3_RS02205 175ce35b346756c0f821e426680a4f00 275 Gene3D G3DSA:3.40.50.620 21 272 9.1E-66 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS02205 175ce35b346756c0f821e426680a4f00 275 Pfam PF02540 NAD synthase 28 272 1.6E-61 T 13-09-2016 IPR022310 NAD/GMP synthase PMA3_RS02205 175ce35b346756c0f821e426680a4f00 275 PANTHER PTHR23090 1 275 2.4E-123 T 13-09-2016 PMA3_RS02205 175ce35b346756c0f821e426680a4f00 275 PANTHER PTHR23090:SF7 1 275 2.4E-123 T 13-09-2016 PMA3_RS17925 4bdd2d12e4cd3236ffbed68d5916f4b7 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 274 5.7E-7 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17925 4bdd2d12e4cd3236ffbed68d5916f4b7 290 PANTHER PTHR30193:SF32 12 287 5.4E-108 T 13-09-2016 PMA3_RS17925 4bdd2d12e4cd3236ffbed68d5916f4b7 290 PANTHER PTHR30193 12 287 5.4E-108 T 13-09-2016 PMA3_RS17925 4bdd2d12e4cd3236ffbed68d5916f4b7 290 Gene3D G3DSA:1.10.3720.10 12 275 3.5E-47 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17925 4bdd2d12e4cd3236ffbed68d5916f4b7 290 SUPERFAMILY SSF161098 12 284 7.72E-51 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS10940 99248265986cbe4d33385ae347508165 232 PANTHER PTHR34979 1 220 1.4E-52 T 13-09-2016 PMA3_RS10940 99248265986cbe4d33385ae347508165 232 Pfam PF03591 AzlC protein 20 158 9.0E-35 T 13-09-2016 IPR011606 Branched-chain amino acid transport, permease PMA3_RS10605 5f7a70173a39f6d03f858ef82b3b3270 365 PANTHER PTHR35564:SF3 8 357 1.7E-104 T 13-09-2016 PMA3_RS10605 5f7a70173a39f6d03f858ef82b3b3270 365 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 26 325 2.9E-71 T 13-09-2016 IPR010732 Type VI secretion, TssG-like PMA3_RS10605 5f7a70173a39f6d03f858ef82b3b3270 365 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 27 325 1.1E-77 T 13-09-2016 IPR010732 Type VI secretion, TssG-like PMA3_RS10605 5f7a70173a39f6d03f858ef82b3b3270 365 PANTHER PTHR35564 8 357 1.7E-104 T 13-09-2016 PMA3_RS13930 7eae7039f9b2da03c79d16dca5009d33 456 PANTHER PTHR10422 124 428 7.4E-53 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS13930 7eae7039f9b2da03c79d16dca5009d33 456 Gene3D G3DSA:1.20.210.10 5 433 5.0E-11 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS13930 7eae7039f9b2da03c79d16dca5009d33 456 SUPERFAMILY SSF81442 3 444 3.92E-70 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS13930 7eae7039f9b2da03c79d16dca5009d33 456 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 8 416 9.2E-66 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS13930 7eae7039f9b2da03c79d16dca5009d33 456 PANTHER PTHR10422:SF24 124 428 7.4E-53 T 13-09-2016 PMA3_RS05385 65fe88e9e7d5a5a584515d4d0df7cbb3 448 Pfam PF07690 Major Facilitator Superfamily 35 405 2.0E-45 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS05385 65fe88e9e7d5a5a584515d4d0df7cbb3 448 Gene3D G3DSA:1.20.1250.20 264 434 1.5E-23 T 13-09-2016 PMA3_RS05385 65fe88e9e7d5a5a584515d4d0df7cbb3 448 SUPERFAMILY SSF103473 13 436 2.09E-80 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS05385 65fe88e9e7d5a5a584515d4d0df7cbb3 448 Gene3D G3DSA:1.20.1250.20 22 209 4.0E-40 T 13-09-2016 PMA3_RS05385 65fe88e9e7d5a5a584515d4d0df7cbb3 448 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 13 412 7.9E-159 T 13-09-2016 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0005215|GO:0006810|GO:0016021 PMA3_RS05385 65fe88e9e7d5a5a584515d4d0df7cbb3 448 PANTHER PTHR24064 12 438 9.0E-195 T 13-09-2016 PMA3_RS05385 65fe88e9e7d5a5a584515d4d0df7cbb3 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS05385 65fe88e9e7d5a5a584515d4d0df7cbb3 448 PANTHER PTHR24064:SF234 12 438 9.0E-195 T 13-09-2016 PMA3_RS05385 65fe88e9e7d5a5a584515d4d0df7cbb3 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS17980 5c4eca7cfb5579993ea657e26f13a726 130 PANTHER PTHR33337 1 110 1.7E-36 T 13-09-2016 PMA3_RS17980 5c4eca7cfb5579993ea657e26f13a726 130 SUPERFAMILY SSF51316 3 124 1.88E-37 T 13-09-2016 IPR011057 Mss4-like PMA3_RS17980 5c4eca7cfb5579993ea657e26f13a726 130 PANTHER PTHR33337:SF10 1 110 1.7E-36 T 13-09-2016 PMA3_RS17980 5c4eca7cfb5579993ea657e26f13a726 130 Gene3D G3DSA:3.90.1590.10 2 125 2.1E-34 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS17980 5c4eca7cfb5579993ea657e26f13a726 130 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 102 1.0E-17 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS17395 52f58e42e3022284240027156ab4eddf 348 PANTHER PTHR10108 138 280 7.3E-20 T 13-09-2016 PMA3_RS17395 52f58e42e3022284240027156ab4eddf 348 PANTHER PTHR10108 300 330 7.3E-20 T 13-09-2016 PMA3_RS17395 52f58e42e3022284240027156ab4eddf 348 SUPERFAMILY SSF53335 136 335 1.46E-32 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS17395 52f58e42e3022284240027156ab4eddf 348 Gene3D G3DSA:1.10.10.10 31 84 1.4E-6 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17395 52f58e42e3022284240027156ab4eddf 348 Gene3D G3DSA:3.40.50.150 150 341 6.3E-31 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS17395 52f58e42e3022284240027156ab4eddf 348 Pfam PF13847 Methyltransferase domain 168 284 3.0E-18 T 13-09-2016 IPR025714 Methyltransferase domain PMA3_RS17395 52f58e42e3022284240027156ab4eddf 348 SUPERFAMILY SSF46785 13 91 9.52E-8 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07860 7c65473d7174d97aaecd00cdc0c5a4dc 185 PANTHER PTHR35562 1 185 4.7E-76 T 13-09-2016 PMA3_RS07860 7c65473d7174d97aaecd00cdc0c5a4dc 185 Pfam PF01713 Smr domain 95 176 2.6E-21 T 13-09-2016 IPR002625 Smr domain PMA3_RS07860 7c65473d7174d97aaecd00cdc0c5a4dc 185 SUPERFAMILY SSF160443 93 176 3.66E-16 T 13-09-2016 IPR002625 Smr domain PMA3_RS07860 7c65473d7174d97aaecd00cdc0c5a4dc 185 PANTHER PTHR35562:SF2 1 185 4.7E-76 T 13-09-2016 PMA3_RS07860 7c65473d7174d97aaecd00cdc0c5a4dc 185 SMART SM00463 92 176 4.8E-5 T 13-09-2016 IPR002625 Smr domain PMA3_RS03635 fb63b847fd58da9a09b2080883549a38 219 PANTHER PTHR30462 16 210 1.8E-30 T 13-09-2016 PMA3_RS03635 fb63b847fd58da9a09b2080883549a38 219 PANTHER PTHR30462:SF3 16 210 1.8E-30 T 13-09-2016 PMA3_RS03635 fb63b847fd58da9a09b2080883549a38 219 Pfam PF04403 Paraquat-inducible protein A 56 210 2.9E-47 T 13-09-2016 IPR007498 Paraquat-inducible protein A PMA3_RS30145 ba50fc8f7b2693508376da475b7f2d74 185 PANTHER PTHR30037 1 179 2.3E-102 T 13-09-2016 PMA3_RS30145 ba50fc8f7b2693508376da475b7f2d74 185 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 3 178 7.6E-90 T 13-09-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 PMA3_RS30145 ba50fc8f7b2693508376da475b7f2d74 185 Pfam PF03352 Methyladenine glycosylase 6 177 2.0E-69 T 13-09-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 PMA3_RS30145 ba50fc8f7b2693508376da475b7f2d74 185 Gene3D G3DSA:1.10.340.30 2 178 7.3E-73 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS30145 ba50fc8f7b2693508376da475b7f2d74 185 PANTHER PTHR30037:SF4 1 179 2.3E-102 T 13-09-2016 PMA3_RS30145 ba50fc8f7b2693508376da475b7f2d74 185 SUPERFAMILY SSF48150 1 180 7.85E-73 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS17985 19303ff0fc88660bb401861464fe8e72 159 SUPERFAMILY SSF54593 4 157 1.24E-47 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS17985 19303ff0fc88660bb401861464fe8e72 159 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 118 1.2E-46 T 13-09-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase PMA3_RS17985 19303ff0fc88660bb401861464fe8e72 159 PIRSF PIRSF021700 1 159 1.3E-67 T 13-09-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase PMA3_RS17985 19303ff0fc88660bb401861464fe8e72 159 PANTHER PTHR33990 3 159 1.1E-114 T 13-09-2016 PMA3_RS17985 19303ff0fc88660bb401861464fe8e72 159 Gene3D G3DSA:3.10.180.10 3 131 2.0E-40 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS17985 19303ff0fc88660bb401861464fe8e72 159 PANTHER PTHR33990:SF3 3 159 1.1E-114 T 13-09-2016 PMA3_RS07745 be036952d13b74977d02a977792bfc21 718 Gene3D G3DSA:3.30.70.100 615 696 1.5E-4 T 13-09-2016 PMA3_RS07745 be036952d13b74977d02a977792bfc21 718 SUPERFAMILY SSF82689 606 708 3.01E-13 T 13-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PMA3_RS07745 be036952d13b74977d02a977792bfc21 718 SUPERFAMILY SSF50182 542 605 3.92E-12 T 13-09-2016 IPR010920 LSM domain PMA3_RS07745 be036952d13b74977d02a977792bfc21 718 SUPERFAMILY SSF82861 460 540 1.7E-14 T 13-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PMA3_RS07745 be036952d13b74977d02a977792bfc21 718 PANTHER PTHR30460 48 713 5.3E-178 T 13-09-2016 PMA3_RS07745 be036952d13b74977d02a977792bfc21 718 Pfam PF00924 Mechanosensitive ion channel 499 698 4.0E-41 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS07745 be036952d13b74977d02a977792bfc21 718 PANTHER PTHR30460:SF0 48 713 5.3E-178 T 13-09-2016 PMA3_RS07745 be036952d13b74977d02a977792bfc21 718 Gene3D G3DSA:2.30.30.60 560 604 1.4E-11 T 13-09-2016 PMA3_RS02855 54a582580157378108871699886d93e5 224 Pfam PF06790 Uncharacterised protein family (UPF0259) 62 212 5.3E-11 T 13-09-2016 IPR009627 Uncharacterised protein family UPF0259 PMA3_RS19425 d667ff0dce0d5bbb9b111f1b2d47286f 367 Pfam PF01261 Xylose isomerase-like TIM barrel 43 293 6.2E-40 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS19425 d667ff0dce0d5bbb9b111f1b2d47286f 367 Pfam PF07582 AP endonuclease family 2 C terminus 294 348 8.4E-22 T 13-09-2016 IPR011418 AP endonuclease, family 2, C-terminal PMA3_RS19425 d667ff0dce0d5bbb9b111f1b2d47286f 367 PANTHER PTHR12110 45 353 7.9E-31 T 13-09-2016 PMA3_RS19425 d667ff0dce0d5bbb9b111f1b2d47286f 367 SUPERFAMILY SSF51658 22 337 8.43E-66 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS19425 d667ff0dce0d5bbb9b111f1b2d47286f 367 Gene3D G3DSA:3.20.20.150 23 337 3.6E-73 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS19425 d667ff0dce0d5bbb9b111f1b2d47286f 367 PANTHER PTHR12110:SF17 45 353 7.9E-31 T 13-09-2016 PMA3_RS16575 08f32e6610de57410e3c9fa24915a586 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 277 1.5E-10 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS16575 08f32e6610de57410e3c9fa24915a586 387 PANTHER PTHR32347 31 320 2.9E-13 T 13-09-2016 PMA3_RS16575 08f32e6610de57410e3c9fa24915a586 387 SUPERFAMILY SSF111369 202 251 2.22E-5 T 13-09-2016 PMA3_RS16575 08f32e6610de57410e3c9fa24915a586 387 SUPERFAMILY SSF111369 68 173 2.22E-5 T 13-09-2016 PMA3_RS16575 08f32e6610de57410e3c9fa24915a586 387 Gene3D G3DSA:2.40.50.100 210 247 2.6E-13 T 13-09-2016 PMA3_RS16575 08f32e6610de57410e3c9fa24915a586 387 Gene3D G3DSA:2.40.50.100 72 101 2.6E-13 T 13-09-2016 PMA3_RS16720 6473d1a655e8765bcb9741e951508f39 91 SUPERFAMILY SSF50129 4 76 6.6E-16 T 13-09-2016 IPR011032 GroES-like PMA3_RS16720 6473d1a655e8765bcb9741e951508f39 91 PANTHER PTHR11695:SF605 16 75 9.5E-12 T 13-09-2016 PMA3_RS16720 6473d1a655e8765bcb9741e951508f39 91 Gene3D G3DSA:3.90.180.10 3 75 5.0E-19 T 13-09-2016 IPR011032 GroES-like PMA3_RS16720 6473d1a655e8765bcb9741e951508f39 91 PANTHER PTHR11695 16 75 9.5E-12 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS06240 82aecd8452b5e9fe3eff3e4a6927d0c9 60 PANTHER PTHR35534 1 60 4.0E-30 T 13-09-2016 PMA3_RS06240 82aecd8452b5e9fe3eff3e4a6927d0c9 60 Pfam PF01783 Ribosomal L32p protein family 2 56 1.2E-20 T 13-09-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 PMA3_RS06240 82aecd8452b5e9fe3eff3e4a6927d0c9 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.034 T 13-09-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 PMA3_RS06240 82aecd8452b5e9fe3eff3e4a6927d0c9 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 8.9E-20 T 13-09-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 PMA3_RS06240 82aecd8452b5e9fe3eff3e4a6927d0c9 60 SUPERFAMILY SSF57829 2 55 6.1E-18 T 13-09-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 PMA3_RS15505 fa2a9b9e47429588e7b9df741358590b 156 PANTHER PTHR35175 1 76 3.4E-26 T 13-09-2016 PMA3_RS15505 fa2a9b9e47429588e7b9df741358590b 156 PANTHER PTHR35175:SF2 1 76 3.4E-26 T 13-09-2016 PMA3_RS15505 fa2a9b9e47429588e7b9df741358590b 156 Pfam PF06945 Protein of unknown function (DUF1289) 8 53 3.1E-15 T 13-09-2016 IPR010710 Protein of unknown function DUF1289 PMA3_RS11450 0d649fc83e483fb6c96b8aee23dc4de0 218 Pfam PF13365 Trypsin-like peptidase domain 97 163 2.6E-6 T 13-09-2016 PMA3_RS11450 0d649fc83e483fb6c96b8aee23dc4de0 218 Gene3D G3DSA:2.40.10.10 96 191 6.3E-11 T 13-09-2016 PMA3_RS11450 0d649fc83e483fb6c96b8aee23dc4de0 218 SUPERFAMILY SSF50494 33 203 1.14E-15 T 13-09-2016 IPR009003 Peptidase S1, PA clan PMA3_RS27115 2635791c12953abe570dc39ed31551cb 175 PIRSF PIRSF002070 1 172 1.5E-36 T 13-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PMA3_RS27115 2635791c12953abe570dc39ed31551cb 175 SUPERFAMILY SSF50249 3 175 3.43E-59 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS27115 2635791c12953abe570dc39ed31551cb 175 Pfam PF00436 Single-strand binding protein family 5 107 1.5E-38 T 13-09-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 PMA3_RS27115 2635791c12953abe570dc39ed31551cb 175 Hamap MF_00984 Single-stranded DNA-binding protein. 5 115 36.264 T 13-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PMA3_RS27115 2635791c12953abe570dc39ed31551cb 175 PANTHER PTHR10302 1 175 7.8E-50 T 13-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PMA3_RS27115 2635791c12953abe570dc39ed31551cb 175 Gene3D G3DSA:2.40.50.140 1 175 1.8E-54 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS27115 2635791c12953abe570dc39ed31551cb 175 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 175 4.5E-59 T 13-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PMA3_RS18485 1afce87b7ea3563d2eacca5ae16263a6 347 PANTHER PTHR11019 204 336 1.4E-20 T 13-09-2016 PMA3_RS18485 1afce87b7ea3563d2eacca5ae16263a6 347 SMART SM00342 246 328 3.7E-18 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18485 1afce87b7ea3563d2eacca5ae16263a6 347 PANTHER PTHR11019:SF52 204 336 1.4E-20 T 13-09-2016 PMA3_RS18485 1afce87b7ea3563d2eacca5ae16263a6 347 Pfam PF12833 Helix-turn-helix domain 257 329 1.3E-13 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS18485 1afce87b7ea3563d2eacca5ae16263a6 347 Gene3D G3DSA:1.10.10.60 286 332 1.9E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18485 1afce87b7ea3563d2eacca5ae16263a6 347 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 201 1.4E-45 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS18485 1afce87b7ea3563d2eacca5ae16263a6 347 SUPERFAMILY SSF46689 281 330 7.62E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS09900 a2a32dbe388863c17ba1bd35237e13f5 2825 PANTHER PTHR39431 2527 2740 3.0E-26 T 13-09-2016 PMA3_RS07500 6181a466e53ac17878ab55456b74c8ce 227 PANTHER PTHR42208:SF1 1 225 5.3E-71 T 13-09-2016 PMA3_RS07500 6181a466e53ac17878ab55456b74c8ce 227 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 11 212 2.2E-57 T 13-09-2016 PMA3_RS07500 6181a466e53ac17878ab55456b74c8ce 227 PANTHER PTHR42208 1 225 5.3E-71 T 13-09-2016 PMA3_RS05130 2955642008724a89f9ecf711b1cd26ac 335 Pfam PF04338 Protein of unknown function, DUF481 128 335 3.3E-45 T 13-09-2016 IPR007433 Protein of unknown function DUF481 PMA3_RS00475 2fcc5abed44c7446d02a2c410c73d984 451 PANTHER PTHR10859:SF92 60 425 8.0E-143 T 13-09-2016 PMA3_RS00475 2fcc5abed44c7446d02a2c410c73d984 451 PANTHER PTHR10859 60 425 8.0E-143 T 13-09-2016 PMA3_RS00475 2fcc5abed44c7446d02a2c410c73d984 451 Gene3D G3DSA:3.90.550.10 75 320 1.9E-49 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS00475 2fcc5abed44c7446d02a2c410c73d984 451 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 438 2.5E-195 T 13-09-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- PMA3_RS00475 2fcc5abed44c7446d02a2c410c73d984 451 SUPERFAMILY SSF53448 63 348 3.43E-63 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS00475 2fcc5abed44c7446d02a2c410c73d984 451 Pfam PF13641 Glycosyltransferase like family 2 77 297 1.0E-34 T 13-09-2016 PMA3_RS19210 fd76abe268ae0c71c30da342b5b83cc8 416 PANTHER PTHR11986 1 416 9.4E-140 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS19210 fd76abe268ae0c71c30da342b5b83cc8 416 PANTHER PTHR11986:SF17 1 416 9.4E-140 T 13-09-2016 PMA3_RS19210 fd76abe268ae0c71c30da342b5b83cc8 416 Pfam PF00202 Aminotransferase class-III 16 412 5.9E-106 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS19210 fd76abe268ae0c71c30da342b5b83cc8 416 Gene3D G3DSA:3.90.1150.10 14 50 9.4E-30 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS19210 fd76abe268ae0c71c30da342b5b83cc8 416 Gene3D G3DSA:3.90.1150.10 316 414 9.4E-30 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS19210 fd76abe268ae0c71c30da342b5b83cc8 416 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 227 264 - T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS19210 fd76abe268ae0c71c30da342b5b83cc8 416 SUPERFAMILY SSF53383 14 412 6.95E-116 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS19210 fd76abe268ae0c71c30da342b5b83cc8 416 Gene3D G3DSA:3.40.640.10 51 308 1.1E-77 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS04410 80a570690a6263a73aca8a8454bb365b 167 Gene3D G3DSA:2.40.440.10 30 166 5.2E-20 T 13-09-2016 PMA3_RS04410 80a570690a6263a73aca8a8454bb365b 167 Pfam PF03734 L,D-transpeptidase catalytic domain 32 165 9.2E-17 T 13-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 PMA3_RS04410 80a570690a6263a73aca8a8454bb365b 167 SUPERFAMILY SSF141523 32 165 5.62E-23 T 13-09-2016 PMA3_RS04410 80a570690a6263a73aca8a8454bb365b 167 PANTHER PTHR36699 1 167 1.2E-54 T 13-09-2016 PMA3_RS19560 a35df1d4e6f8d4ce2d448b5e78ec15c6 124 TIGRFAM TIGR00494 crcB: protein CrcB 7 121 6.7E-24 T 13-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PMA3_RS19560 a35df1d4e6f8d4ce2d448b5e78ec15c6 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 118 6.3E-25 T 13-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PMA3_RS19560 a35df1d4e6f8d4ce2d448b5e78ec15c6 124 PANTHER PTHR28259 5 121 8.0E-34 T 13-09-2016 PMA3_RS19560 a35df1d4e6f8d4ce2d448b5e78ec15c6 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 123 18.81 T 13-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PMA3_RS04645 e12f6489f6dbfe5289f926af7e0b5b56 262 PRINTS PR01021 OMPA domain signature 191 207 1.8E-12 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS04645 e12f6489f6dbfe5289f926af7e0b5b56 262 PRINTS PR01021 OMPA domain signature 146 168 1.8E-12 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS04645 e12f6489f6dbfe5289f926af7e0b5b56 262 PRINTS PR01021 OMPA domain signature 176 191 1.8E-12 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS04645 e12f6489f6dbfe5289f926af7e0b5b56 262 Pfam PF00691 OmpA family 145 240 2.2E-21 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS04645 e12f6489f6dbfe5289f926af7e0b5b56 262 Gene3D G3DSA:3.30.1330.60 134 246 1.2E-37 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS04645 e12f6489f6dbfe5289f926af7e0b5b56 262 PANTHER PTHR30128 132 257 9.1E-46 T 13-09-2016 PMA3_RS04645 e12f6489f6dbfe5289f926af7e0b5b56 262 SUPERFAMILY SSF103088 134 246 2.49E-36 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS04645 e12f6489f6dbfe5289f926af7e0b5b56 262 Pfam PF14346 Domain of unknown function (DUF4398) 15 113 4.0E-11 T 13-09-2016 IPR025511 Domain of unknown function DUF4398 PMA3_RS00775 5393bdecb4119b49e26a8f84d409ca84 527 Pfam PF04262 Glutamate-cysteine ligase 10 380 5.2E-166 T 13-09-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 PMA3_RS00775 5393bdecb4119b49e26a8f84d409ca84 527 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 7 516 1.5E-229 T 13-09-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 PMA3_RS00775 5393bdecb4119b49e26a8f84d409ca84 527 SUPERFAMILY SSF55931 7 515 1.24E-196 T 13-09-2016 PMA3_RS00775 5393bdecb4119b49e26a8f84d409ca84 527 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 527 229.635 T 13-09-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 PMA3_RS00775 5393bdecb4119b49e26a8f84d409ca84 527 PANTHER PTHR38761 2 526 7.4E-265 T 13-09-2016 PMA3_RS05055 18f17f62931aa02c9d13d688e6732d07 156 PANTHER PTHR37805 1 154 3.3E-81 T 13-09-2016 PMA3_RS05055 18f17f62931aa02c9d13d688e6732d07 156 PANTHER PTHR37805:SF1 1 154 3.3E-81 T 13-09-2016 PMA3_RS05055 18f17f62931aa02c9d13d688e6732d07 156 Pfam PF07308 Protein of unknown function (DUF1456) 3 72 4.4E-24 T 13-09-2016 IPR009921 Domain of unknown function DUF1456 PMA3_RS05055 18f17f62931aa02c9d13d688e6732d07 156 Pfam PF07308 Protein of unknown function (DUF1456) 88 154 3.1E-24 T 13-09-2016 IPR009921 Domain of unknown function DUF1456 PMA3_RS09745 83412c5867a217cbf1bf666aa9bc23f6 381 PANTHER PTHR23091:SF256 1 182 9.6E-51 T 13-09-2016 PMA3_RS09745 83412c5867a217cbf1bf666aa9bc23f6 381 Gene3D G3DSA:3.40.630.30 3 148 5.5E-32 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS09745 83412c5867a217cbf1bf666aa9bc23f6 381 PANTHER PTHR23091 1 182 9.6E-51 T 13-09-2016 PMA3_RS09745 83412c5867a217cbf1bf666aa9bc23f6 381 Pfam PF00583 Acetyltransferase (GNAT) family 50 126 1.6E-12 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS09745 83412c5867a217cbf1bf666aa9bc23f6 381 SUPERFAMILY SSF55729 1 141 1.01E-30 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS09745 83412c5867a217cbf1bf666aa9bc23f6 381 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 139 3.3E-25 T 13-09-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 PMA3_RS09745 83412c5867a217cbf1bf666aa9bc23f6 381 Pfam PF11814 Peptidase_C39 like family 159 361 5.3E-89 T 13-09-2016 IPR021770 Protein of unknown function DUF3335 PMA3_RS17995 52bc4ad597845ec6be42c26af1e15673 441 PANTHER PTHR11662 19 428 6.7E-191 T 13-09-2016 PMA3_RS17995 52bc4ad597845ec6be42c26af1e15673 441 Gene3D G3DSA:1.20.1250.20 246 432 7.6E-24 T 13-09-2016 PMA3_RS17995 52bc4ad597845ec6be42c26af1e15673 441 Gene3D G3DSA:1.20.1250.20 24 222 1.3E-39 T 13-09-2016 PMA3_RS17995 52bc4ad597845ec6be42c26af1e15673 441 SUPERFAMILY SSF103473 15 437 5.36E-82 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS17995 52bc4ad597845ec6be42c26af1e15673 441 PANTHER PTHR11662:SF267 19 428 6.7E-191 T 13-09-2016 PMA3_RS17995 52bc4ad597845ec6be42c26af1e15673 441 Pfam PF07690 Major Facilitator Superfamily 31 392 2.8E-45 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS29945 050bda8f2c61c4ad4997b31a14771b61 652 PANTHER PTHR10264 409 635 1.6E-84 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS29945 050bda8f2c61c4ad4997b31a14771b61 652 PANTHER PTHR10264 244 356 1.6E-84 T 13-09-2016 IPR001972 Stomatin family GO:0016020 PMA3_RS29945 050bda8f2c61c4ad4997b31a14771b61 652 Pfam PF01145 SPFH domain / Band 7 family 327 543 8.3E-26 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS29945 050bda8f2c61c4ad4997b31a14771b61 652 PANTHER PTHR10264:SF80 409 635 1.6E-84 T 13-09-2016 PMA3_RS29945 050bda8f2c61c4ad4997b31a14771b61 652 PANTHER PTHR10264:SF80 244 356 1.6E-84 T 13-09-2016 PMA3_RS29945 050bda8f2c61c4ad4997b31a14771b61 652 SUPERFAMILY SSF117892 423 530 6.67E-8 T 13-09-2016 IPR001107 Band 7 domain PMA3_RS21945 d5a202c80acd8e4eb120bf72ee8fba36 103 Pfam PF06127 Protein of unknown function (DUF962) 7 100 4.5E-37 T 13-09-2016 IPR009305 Protein of unknown function DUF962 PMA3_RS21945 d5a202c80acd8e4eb120bf72ee8fba36 103 PANTHER PTHR34205:SF1 2 101 5.8E-49 T 13-09-2016 PMA3_RS21945 d5a202c80acd8e4eb120bf72ee8fba36 103 PANTHER PTHR34205 2 101 5.8E-49 T 13-09-2016 PMA3_RS22240 5e4e0a496fa79be214f817209af7a068 509 PANTHER PTHR35342:SF1 2 504 0.0 T 13-09-2016 PMA3_RS22240 5e4e0a496fa79be214f817209af7a068 509 PANTHER PTHR35342 2 504 0.0 T 13-09-2016 PMA3_RS22240 5e4e0a496fa79be214f817209af7a068 509 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 21 439 2.0E-137 T 13-09-2016 IPR002823 Protein of unknown function DUF112, transmembrane PMA3_RS25690 c1c4b4d99b10138be35dce61281ca46f 223 SUPERFAMILY SSF51197 2 171 3.48E-38 T 13-09-2016 PMA3_RS25690 c1c4b4d99b10138be35dce61281ca46f 223 Gene3D G3DSA:2.60.120.620 2 147 2.3E-24 T 13-09-2016 PMA3_RS25690 c1c4b4d99b10138be35dce61281ca46f 223 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 3 131 4.2E-21 T 13-09-2016 IPR008775 Phytanoyl-CoA dioxygenase PMA3_RS25690 c1c4b4d99b10138be35dce61281ca46f 223 PANTHER PTHR20883:SF0 1 199 8.6E-22 T 13-09-2016 PMA3_RS25690 c1c4b4d99b10138be35dce61281ca46f 223 PANTHER PTHR20883 1 199 8.6E-22 T 13-09-2016 PMA3_RS15025 5a4812e77644f07bc27276fbe3729b81 438 SUPERFAMILY SSF111369 86 324 2.48E-55 T 13-09-2016 PMA3_RS15025 5a4812e77644f07bc27276fbe3729b81 438 Gene3D G3DSA:2.40.50.100 98 131 1.2E-22 T 13-09-2016 PMA3_RS15025 5a4812e77644f07bc27276fbe3729b81 438 Gene3D G3DSA:2.40.50.100 206 240 1.2E-22 T 13-09-2016 PMA3_RS15025 5a4812e77644f07bc27276fbe3729b81 438 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 75 401 3.3E-72 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS15025 5a4812e77644f07bc27276fbe3729b81 438 PANTHER PTHR30469:SF12 69 413 1.2E-155 T 13-09-2016 IPR022824 Multidrug resistance protein MdtA PMA3_RS15025 5a4812e77644f07bc27276fbe3729b81 438 Pfam PF13533 Biotin-lipoyl like 98 145 7.5E-14 T 13-09-2016 PMA3_RS15025 5a4812e77644f07bc27276fbe3729b81 438 PANTHER PTHR30469 69 413 1.2E-155 T 13-09-2016 PMA3_RS08700 685e18049db0aacef636b5d54f8cb443 416 Pfam PF12704 MacB-like periplasmic core domain 27 193 6.9E-16 T 13-09-2016 IPR025857 MacB-like periplasmic core domain PMA3_RS08700 685e18049db0aacef636b5d54f8cb443 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 416 2.2E-166 T 13-09-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 PMA3_RS08700 685e18049db0aacef636b5d54f8cb443 416 PANTHER PTHR30489 1 416 2.3E-119 T 13-09-2016 PMA3_RS08700 685e18049db0aacef636b5d54f8cb443 416 PANTHER PTHR30489:SF8 1 416 2.3E-119 T 13-09-2016 PMA3_RS08700 685e18049db0aacef636b5d54f8cb443 416 Pfam PF02687 FtsX-like permease family 276 409 4.2E-21 T 13-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PMA3_RS12470 57aa266c3f675caaf2f6164429b4b5c9 475 Gene3D G3DSA:3.10.129.10 19 150 9.3E-45 T 13-09-2016 IPR029069 HotDog domain PMA3_RS12470 57aa266c3f675caaf2f6164429b4b5c9 475 PANTHER PTHR13078 17 148 4.4E-35 T 13-09-2016 PMA3_RS12470 57aa266c3f675caaf2f6164429b4b5c9 475 SUPERFAMILY SSF53659 176 469 3.65E-67 T 13-09-2016 PMA3_RS12470 57aa266c3f675caaf2f6164429b4b5c9 475 Gene3D G3DSA:3.40.50.10750 284 440 1.5E-47 T 13-09-2016 PMA3_RS12470 57aa266c3f675caaf2f6164429b4b5c9 475 Pfam PF01575 MaoC like domain 30 120 1.6E-19 T 13-09-2016 IPR002539 MaoC-like domain PMA3_RS12470 57aa266c3f675caaf2f6164429b4b5c9 475 SUPERFAMILY SSF54637 16 153 7.77E-37 T 13-09-2016 IPR029069 HotDog domain PMA3_RS12470 57aa266c3f675caaf2f6164429b4b5c9 475 Pfam PF01515 Phosphate acetyl/butaryl transferase 248 464 1.5E-41 T 13-09-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PMA3_RS03420 bf41635681ddf54d80082360d4d2bc2e 117 Pfam PF04972 BON domain 48 111 3.1E-14 T 13-09-2016 IPR007055 BON domain PMA3_RS03420 bf41635681ddf54d80082360d4d2bc2e 117 PANTHER PTHR34606 41 116 1.1E-20 T 13-09-2016 PMA3_RS03420 bf41635681ddf54d80082360d4d2bc2e 117 SMART SM00749 53 117 0.0021 T 13-09-2016 IPR014004 Transport-associated and nodulation domain, bacteria PMA3_RS05595 0ac3cf719df06450c92fed6cdd2b5204 257 SMART SM00062 25 253 5.1E-78 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS05595 0ac3cf719df06450c92fed6cdd2b5204 257 Gene3D G3DSA:3.40.190.10 22 111 1.9E-44 T 13-09-2016 PMA3_RS05595 0ac3cf719df06450c92fed6cdd2b5204 257 Gene3D G3DSA:3.40.190.10 213 255 1.9E-44 T 13-09-2016 PMA3_RS05595 0ac3cf719df06450c92fed6cdd2b5204 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 250 7.6E-61 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS05595 0ac3cf719df06450c92fed6cdd2b5204 257 PANTHER PTHR18966:SF152 21 250 2.3E-66 T 13-09-2016 PMA3_RS05595 0ac3cf719df06450c92fed6cdd2b5204 257 PANTHER PTHR18966 21 250 2.3E-66 T 13-09-2016 PMA3_RS05595 0ac3cf719df06450c92fed6cdd2b5204 257 SUPERFAMILY SSF53850 1 254 2.43E-70 T 13-09-2016 PMA3_RS05595 0ac3cf719df06450c92fed6cdd2b5204 257 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 250 6.1E-87 T 13-09-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 PMA3_RS05595 0ac3cf719df06450c92fed6cdd2b5204 257 Gene3D G3DSA:3.40.190.10 113 211 9.1E-26 T 13-09-2016 PMA3_RS27820 a55cceaf619a9d46a02f34dbd1274fac 295 TIGRFAM TIGR00688 rarD: protein RarD 8 260 4.9E-77 T 13-09-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 PMA3_RS27820 a55cceaf619a9d46a02f34dbd1274fac 295 SUPERFAMILY SSF103481 208 284 8.11E-11 T 13-09-2016 PMA3_RS27820 a55cceaf619a9d46a02f34dbd1274fac 295 Pfam PF00892 EamA-like transporter family 155 284 3.3E-7 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS27820 a55cceaf619a9d46a02f34dbd1274fac 295 Pfam PF00892 EamA-like transporter family 8 141 1.7E-16 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS27820 a55cceaf619a9d46a02f34dbd1274fac 295 SUPERFAMILY SSF103481 47 145 8.5E-15 T 13-09-2016 PMA3_RS27820 a55cceaf619a9d46a02f34dbd1274fac 295 PANTHER PTHR22911:SF41 1 295 3.2E-134 T 13-09-2016 PMA3_RS27820 a55cceaf619a9d46a02f34dbd1274fac 295 PANTHER PTHR22911 1 295 3.2E-134 T 13-09-2016 PMA3_RS28070 7d2585d9e87e2426d08e137d32d73190 158 Gene3D G3DSA:3.10.129.10 1 138 6.8E-50 T 13-09-2016 IPR029069 HotDog domain PMA3_RS28070 7d2585d9e87e2426d08e137d32d73190 158 PANTHER PTHR31793:SF2 6 147 1.7E-57 T 13-09-2016 PMA3_RS28070 7d2585d9e87e2426d08e137d32d73190 158 PANTHER PTHR31793 6 147 1.7E-57 T 13-09-2016 PMA3_RS28070 7d2585d9e87e2426d08e137d32d73190 158 Pfam PF13279 Thioesterase-like superfamily 13 131 2.3E-16 T 13-09-2016 PMA3_RS28070 7d2585d9e87e2426d08e137d32d73190 158 SUPERFAMILY SSF54637 2 155 9.29E-43 T 13-09-2016 IPR029069 HotDog domain PMA3_RS15535 3c94d344bf59272734d3dce9b3c5264c 321 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 172 - T 13-09-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PMA3_RS15535 3c94d344bf59272734d3dce9b3c5264c 321 SUPERFAMILY SSF52283 3 133 1.66E-29 T 13-09-2016 PMA3_RS15535 3c94d344bf59272734d3dce9b3c5264c 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 279 1.1E-45 T 13-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PMA3_RS15535 3c94d344bf59272734d3dce9b3c5264c 321 Gene3D G3DSA:3.40.50.720 118 281 2.4E-51 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15535 3c94d344bf59272734d3dce9b3c5264c 321 PANTHER PTHR10996 5 314 2.3E-99 T 13-09-2016 PMA3_RS15535 3c94d344bf59272734d3dce9b3c5264c 321 Gene3D G3DSA:3.40.50.720 2 117 5.8E-33 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15535 3c94d344bf59272734d3dce9b3c5264c 321 SUPERFAMILY SSF51735 100 280 1.43E-49 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS15535 3c94d344bf59272734d3dce9b3c5264c 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 43 308 1.9E-19 T 13-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PMA3_RS16705 6ad57850727c9ba5851fa2bef96b89b5 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 161 4.3E-20 T 13-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS16705 6ad57850727c9ba5851fa2bef96b89b5 168 Gene3D G3DSA:1.10.1740.10 10 78 1.2E-13 T 13-09-2016 PMA3_RS16705 6ad57850727c9ba5851fa2bef96b89b5 168 SUPERFAMILY SSF88659 101 162 1.21E-10 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS16705 6ad57850727c9ba5851fa2bef96b89b5 168 PANTHER PTHR30173:SF9 12 161 9.7E-32 T 13-09-2016 PMA3_RS16705 6ad57850727c9ba5851fa2bef96b89b5 168 SUPERFAMILY SSF88946 10 98 8.24E-14 T 13-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS16705 6ad57850727c9ba5851fa2bef96b89b5 168 Pfam PF08281 Sigma-70, region 4 109 161 2.5E-12 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS16705 6ad57850727c9ba5851fa2bef96b89b5 168 Pfam PF04542 Sigma-70 region 2 12 78 2.8E-12 T 13-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS16705 6ad57850727c9ba5851fa2bef96b89b5 168 PANTHER PTHR30173 12 161 9.7E-32 T 13-09-2016 PMA3_RS16705 6ad57850727c9ba5851fa2bef96b89b5 168 Gene3D G3DSA:1.10.10.10 108 161 7.1E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS19785 36a44b1bfbcc9046d1aa1634af5ff643 266 PANTHER PTHR32243:SF18 6 266 1.5E-83 T 13-09-2016 PMA3_RS19785 36a44b1bfbcc9046d1aa1634af5ff643 266 SUPERFAMILY SSF161098 6 265 5.42E-59 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS19785 36a44b1bfbcc9046d1aa1634af5ff643 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 255 7.9E-11 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS19785 36a44b1bfbcc9046d1aa1634af5ff643 266 PANTHER PTHR32243 6 266 1.5E-83 T 13-09-2016 PMA3_RS19785 36a44b1bfbcc9046d1aa1634af5ff643 266 Gene3D G3DSA:1.10.3720.10 7 253 9.7E-51 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23775 c44fb4ec18924331eab6ee83bfaa3c4d 72 PANTHER PTHR37424 2 53 9.5E-17 T 13-09-2016 PMA3_RS23775 c44fb4ec18924331eab6ee83bfaa3c4d 72 PANTHER PTHR37424:SF1 2 53 9.5E-17 T 13-09-2016 PMA3_RS23775 c44fb4ec18924331eab6ee83bfaa3c4d 72 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 49 1.6E-11 T 13-09-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 PANTHER PTHR21661:SF35 45 441 2.0E-129 T 13-09-2016 PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 SUPERFAMILY SSF53474 46 438 6.09E-101 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 PRINTS PR00412 Epoxide hydrolase signature 382 398 2.7E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 PRINTS PR00412 Epoxide hydrolase signature 414 436 2.7E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 PRINTS PR00412 Epoxide hydrolase signature 148 166 2.7E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 PRINTS PR00412 Epoxide hydrolase signature 177 192 2.7E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 PRINTS PR00412 Epoxide hydrolase signature 222 235 2.7E-14 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 Pfam PF06441 Epoxide hydrolase N terminus 52 157 8.6E-36 T 13-09-2016 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9 PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 PANTHER PTHR21661 45 441 2.0E-129 T 13-09-2016 PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 PIRSF PIRSF001112 9 441 2.2E-158 T 13-09-2016 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9 PMA3_RS18410 fe67135673dd03015d6f5ebba9917f48 441 Gene3D G3DSA:3.40.50.1820 45 440 4.1E-139 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS12535 12120814bc4db538d76140d5f91a0388 138 Pfam PF13520 Amino acid permease 32 127 1.3E-14 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS12535 12120814bc4db538d76140d5f91a0388 138 PANTHER PTHR11785:SF77 29 125 1.5E-49 T 13-09-2016 PMA3_RS12535 12120814bc4db538d76140d5f91a0388 138 PANTHER PTHR11785 29 125 1.5E-49 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS11100 b0db175e7be38014a8989681c5eaeb5b 301 Gene3D G3DSA:3.60.20.10 116 299 3.6E-58 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS11100 b0db175e7be38014a8989681c5eaeb5b 301 Gene3D G3DSA:3.60.20.10 2 44 3.6E-58 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS11100 b0db175e7be38014a8989681c5eaeb5b 301 SUPERFAMILY SSF56235 117 299 1.54E-47 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS11100 b0db175e7be38014a8989681c5eaeb5b 301 SUPERFAMILY SSF56235 2 44 1.54E-47 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS11100 b0db175e7be38014a8989681c5eaeb5b 301 PANTHER PTHR11907 113 277 2.5E-35 T 13-09-2016 PMA3_RS11100 b0db175e7be38014a8989681c5eaeb5b 301 PANTHER PTHR11907 1 55 2.5E-35 T 13-09-2016 PMA3_RS11100 b0db175e7be38014a8989681c5eaeb5b 301 PANTHER PTHR11907:SF0 113 277 2.5E-35 T 13-09-2016 PMA3_RS11100 b0db175e7be38014a8989681c5eaeb5b 301 PANTHER PTHR11907:SF0 1 55 2.5E-35 T 13-09-2016 PMA3_RS11100 b0db175e7be38014a8989681c5eaeb5b 301 Pfam PF13522 Glutamine amidotransferase domain 142 270 1.5E-20 T 13-09-2016 PMA3_RS15490 db40676b5c2c8bdb9adc722077f90ee1 497 Gene3D G3DSA:2.40.10.10 148 240 6.2E-4 T 13-09-2016 PMA3_RS15490 db40676b5c2c8bdb9adc722077f90ee1 497 SUPERFAMILY SSF50494 36 239 5.56E-20 T 13-09-2016 IPR009003 Peptidase S1, PA clan PMA3_RS15490 db40676b5c2c8bdb9adc722077f90ee1 497 Pfam PF13365 Trypsin-like peptidase domain 79 231 2.8E-11 T 13-09-2016 PMA3_RS15490 db40676b5c2c8bdb9adc722077f90ee1 497 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 85 90 - T 13-09-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 PMA3_RS15490 db40676b5c2c8bdb9adc722077f90ee1 497 Gene3D G3DSA:2.40.10.10 62 147 8.0E-8 T 13-09-2016 PMA3_RS11235 81bb283368561a2042373e48851719e9 98 PANTHER PTHR41521 1 98 1.1E-23 T 13-09-2016 PMA3_RS11235 81bb283368561a2042373e48851719e9 98 Gene3D G3DSA:3.30.70.900 1 95 8.1E-37 T 13-09-2016 PMA3_RS11235 81bb283368561a2042373e48851719e9 98 SUPERFAMILY SSF54909 1 95 6.13E-32 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS11235 81bb283368561a2042373e48851719e9 98 Pfam PF07045 Domain of unknown function (DUF1330) 2 95 1.6E-36 T 13-09-2016 IPR010753 Domain of unknown function DUF1330 PMA3_RS11825 68efa2813987d0ac2faa6c78c900853a 302 PANTHER PTHR11941 8 88 1.5E-82 T 13-09-2016 PMA3_RS11825 68efa2813987d0ac2faa6c78c900853a 302 PANTHER PTHR11941:SF85 8 88 1.5E-82 T 13-09-2016 PMA3_RS11825 68efa2813987d0ac2faa6c78c900853a 302 SUPERFAMILY SSF52096 16 277 8.5E-66 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS11825 68efa2813987d0ac2faa6c78c900853a 302 Gene3D G3DSA:3.90.226.10 14 261 3.8E-64 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS11825 68efa2813987d0ac2faa6c78c900853a 302 Pfam PF00378 Enoyl-CoA hydratase/isomerase 112 257 2.3E-25 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS11825 68efa2813987d0ac2faa6c78c900853a 302 Pfam PF00378 Enoyl-CoA hydratase/isomerase 28 86 2.0E-11 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS11825 68efa2813987d0ac2faa6c78c900853a 302 PANTHER PTHR11941 107 296 1.5E-82 T 13-09-2016 PMA3_RS11825 68efa2813987d0ac2faa6c78c900853a 302 PANTHER PTHR11941:SF85 107 296 1.5E-82 T 13-09-2016 PMA3_RS22200 8a911de1ece117dc6e45bcfb1533507a 526 Pfam PF00171 Aldehyde dehydrogenase family 35 458 2.1E-42 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS22200 8a911de1ece117dc6e45bcfb1533507a 526 Gene3D G3DSA:3.40.309.10 267 454 1.0E-54 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS22200 8a911de1ece117dc6e45bcfb1533507a 526 PANTHER PTHR11699 7 519 9.6E-172 T 13-09-2016 PMA3_RS22200 8a911de1ece117dc6e45bcfb1533507a 526 PANTHER PTHR11699:SF10 7 519 9.6E-172 T 13-09-2016 PMA3_RS22200 8a911de1ece117dc6e45bcfb1533507a 526 SUPERFAMILY SSF53720 23 517 9.42E-99 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS22200 8a911de1ece117dc6e45bcfb1533507a 526 Gene3D G3DSA:3.40.605.10 7 265 1.9E-44 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 0.0087 T 13-09-2016 PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.6E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.6E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.6E-5 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 Gene3D G3DSA:3.40.50.720 1 253 3.5E-78 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 SUPERFAMILY SSF51735 5 253 7.85E-75 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 252 3.5E-59 T 13-09-2016 PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PANTHER PTHR24321 2 253 4.1E-53 T 13-09-2016 PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 6.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.2E-32 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS14345 e2fe32fe61bc93dec4ab86d15853ec70 254 PANTHER PTHR24321:SF6 2 253 4.1E-53 T 13-09-2016 PMA3_RS19410 d41096bbee18e2533e6839229a916148 160 SUPERFAMILY SSF54197 4 106 2.63E-15 T 13-09-2016 IPR011146 HIT-like domain GO:0003824 PMA3_RS19410 d41096bbee18e2533e6839229a916148 160 Gene3D G3DSA:3.30.428.10 5 104 2.8E-12 T 13-09-2016 IPR011146 HIT-like domain GO:0003824 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 PANTHER PTHR30118:SF8 1 307 6.8E-93 T 13-09-2016 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.9E-14 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 SUPERFAMILY SSF46785 8 88 4.01E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 Gene3D G3DSA:3.40.190.10 182 269 5.3E-24 T 13-09-2016 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.8E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.8E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.8E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 PANTHER PTHR30118 1 307 6.8E-93 T 13-09-2016 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 Gene3D G3DSA:3.40.190.10 273 300 3.1E-21 T 13-09-2016 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 Gene3D G3DSA:3.40.190.10 93 176 3.1E-21 T 13-09-2016 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 SUPERFAMILY SSF53850 93 294 2.35E-36 T 13-09-2016 PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 Gene3D G3DSA:1.10.10.10 2 87 1.3E-27 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22400 7f2d8e5f95db7be3fd687ca2391553d2 308 Pfam PF03466 LysR substrate binding domain 100 295 2.5E-23 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS18675 79b1b0f27003351e8595d4242655afba 380 Gene3D G3DSA:1.20.140.10 217 376 7.6E-31 T 13-09-2016 PMA3_RS18675 79b1b0f27003351e8595d4242655afba 380 Gene3D G3DSA:2.40.110.10 122 216 1.4E-13 T 13-09-2016 PMA3_RS18675 79b1b0f27003351e8595d4242655afba 380 PANTHER PTHR10909 1 349 4.6E-69 T 13-09-2016 PMA3_RS18675 79b1b0f27003351e8595d4242655afba 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 6.3E-20 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18675 79b1b0f27003351e8595d4242655afba 380 SUPERFAMILY SSF56645 1 224 4.32E-46 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS18675 79b1b0f27003351e8595d4242655afba 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 360 1.8E-21 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18675 79b1b0f27003351e8595d4242655afba 380 Gene3D G3DSA:1.10.540.10 1 118 3.4E-23 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS18675 79b1b0f27003351e8595d4242655afba 380 PANTHER PTHR10909:SF341 1 349 4.6E-69 T 13-09-2016 PMA3_RS18675 79b1b0f27003351e8595d4242655afba 380 SUPERFAMILY SSF47203 239 377 1.21E-33 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS18675 79b1b0f27003351e8595d4242655afba 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 215 1.5E-10 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS16175 3020b39d5b7ac0ad1508a88685250b4d 226 Pfam PF02665 Nitrate reductase gamma subunit 5 225 6.1E-79 T 13-09-2016 IPR023234 NarG-like domain PMA3_RS16175 3020b39d5b7ac0ad1508a88685250b4d 226 SUPERFAMILY SSF103501 1 224 5.1E-68 T 13-09-2016 IPR023234 NarG-like domain PMA3_RS16175 3020b39d5b7ac0ad1508a88685250b4d 226 PANTHER PTHR30598:SF3 1 225 1.2E-98 T 13-09-2016 PMA3_RS16175 3020b39d5b7ac0ad1508a88685250b4d 226 PANTHER PTHR30598 1 225 1.2E-98 T 13-09-2016 PMA3_RS16175 3020b39d5b7ac0ad1508a88685250b4d 226 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 4 225 2.4E-80 T 13-09-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 PMA3_RS16175 3020b39d5b7ac0ad1508a88685250b4d 226 Gene3D G3DSA:1.20.950.20 2 216 3.9E-67 T 13-09-2016 PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 189 200 8.6E-29 T 13-09-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 132 152 8.6E-29 T 13-09-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 270 286 8.6E-29 T 13-09-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 168 184 8.6E-29 T 13-09-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 Gene3D G3DSA:3.10.170.10 67 181 8.9E-42 T 13-09-2016 IPR013856 Peptidase M4 domain GO:0004222 PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 PANTHER PTHR33794 57 352 2.6E-115 T 13-09-2016 PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 180 347 7.8E-52 T 13-09-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 SUPERFAMILY SSF55486 70 347 2.93E-80 T 13-09-2016 PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 Gene3D G3DSA:1.10.390.10 182 347 1.1E-51 T 13-09-2016 PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 Pfam PF16485 Protealysin propeptide 8 44 5.1E-14 T 13-09-2016 IPR032475 Protealysin, N-terminal propeptide PMA3_RS13030 462343093cc492f6b596c2e17cdd266c 354 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 95 177 2.0E-28 T 13-09-2016 IPR013856 Peptidase M4 domain GO:0004222 PMA3_RS17290 11b0e128868698ddadb73a77f626c03b 93 Pfam PF11746 Protein of unknown function (DUF3303) 2 82 4.7E-23 T 13-09-2016 IPR021734 Protein of unknown function DUF3303 PMA3_RS19195 a515621d7c0c5bb97336445b3f4a1029 489 PANTHER PTHR33451:SF3 1 481 4.0E-134 T 13-09-2016 PMA3_RS19195 a515621d7c0c5bb97336445b3f4a1029 489 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 22 462 6.0E-121 T 13-09-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 PMA3_RS19195 a515621d7c0c5bb97336445b3f4a1029 489 Pfam PF03553 Na+/H+ antiporter family 166 458 3.0E-41 T 13-09-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PMA3_RS19195 a515621d7c0c5bb97336445b3f4a1029 489 PANTHER PTHR33451 1 481 4.0E-134 T 13-09-2016 PMA3_RS00245 e8d70893f2abea5c695d2b4b46f318d7 71 Pfam PF06568 Domain of unknown function (DUF1127) 27 61 4.4E-8 T 13-09-2016 IPR009506 Protein of unknown function DUF1127 PMA3_RS02835 0f02ea8e85d0095be32ae15aef7f6a72 460 Pfam PF00202 Aminotransferase class-III 38 447 8.9E-91 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS02835 0f02ea8e85d0095be32ae15aef7f6a72 460 Gene3D G3DSA:3.40.640.10 74 345 2.3E-75 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS02835 0f02ea8e85d0095be32ae15aef7f6a72 460 PANTHER PTHR11986 8 458 3.3E-134 T 13-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PMA3_RS02835 0f02ea8e85d0095be32ae15aef7f6a72 460 PANTHER PTHR11986:SF81 8 458 3.3E-134 T 13-09-2016 PMA3_RS02835 0f02ea8e85d0095be32ae15aef7f6a72 460 Gene3D G3DSA:3.90.1150.10 348 454 7.0E-40 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS02835 0f02ea8e85d0095be32ae15aef7f6a72 460 Gene3D G3DSA:3.90.1150.10 11 72 7.0E-40 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS02835 0f02ea8e85d0095be32ae15aef7f6a72 460 SUPERFAMILY SSF53383 11 451 2.11E-113 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS13590 a689691b55472605fed1141257d9460d 84 SUPERFAMILY SSF103473 11 77 1.44E-6 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS13590 a689691b55472605fed1141257d9460d 84 Gene3D G3DSA:1.20.1250.20 11 79 4.9E-6 T 13-09-2016 PMA3_RS13590 a689691b55472605fed1141257d9460d 84 Pfam PF03825 Nucleoside H+ symporter 11 74 1.2E-14 T 13-09-2016 PMA3_RS14350 972279d238cc8edfb9cb0c4029f15409 410 Pfam PF04346 Ethanolamine utilisation protein, EutH 4 385 3.9E-115 T 13-09-2016 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 PMA3_RS14350 972279d238cc8edfb9cb0c4029f15409 410 PIRSF PIRSF019466 2 402 5.7E-119 T 13-09-2016 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 PMA3_RS14350 972279d238cc8edfb9cb0c4029f15409 410 PANTHER PTHR40089 3 403 1.3E-104 T 13-09-2016 PMA3_RS24170 d7570e20d7cb9f7b014cb6f18df04852 273 PANTHER PTHR21666 114 268 7.9E-38 T 13-09-2016 PMA3_RS24170 d7570e20d7cb9f7b014cb6f18df04852 273 Gene3D G3DSA:2.70.70.10 124 269 1.2E-43 T 13-09-2016 PMA3_RS24170 d7570e20d7cb9f7b014cb6f18df04852 273 Pfam PF01551 Peptidase family M23 170 264 2.3E-28 T 13-09-2016 IPR016047 Peptidase M23 PMA3_RS24170 d7570e20d7cb9f7b014cb6f18df04852 273 Gene3D G3DSA:2.60.40.1590 22 115 1.0E-37 T 13-09-2016 PMA3_RS24170 d7570e20d7cb9f7b014cb6f18df04852 273 SUPERFAMILY SSF51261 122 268 1.2E-47 T 13-09-2016 IPR011055 Duplicated hybrid motif PMA3_RS10340 741c7618578134ea82b06ccde9273baa 434 Pfam PF03600 Citrate transporter 14 378 6.1E-45 T 13-09-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PMA3_RS10340 741c7618578134ea82b06ccde9273baa 434 PANTHER PTHR10283 49 428 1.1E-159 T 13-09-2016 PMA3_RS10340 741c7618578134ea82b06ccde9273baa 434 TIGRFAM TIGR00784 citMHS: citrate transporter 1 432 1.3E-191 T 13-09-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 PMA3_RS10340 741c7618578134ea82b06ccde9273baa 434 PANTHER PTHR10283:SF87 49 428 1.1E-159 T 13-09-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 PMA3_RS04780 5fa0a83074d1c190448c436b6f75c20e 272 PANTHER PTHR10953:SF159 1 162 1.1E-116 T 13-09-2016 PMA3_RS04780 5fa0a83074d1c190448c436b6f75c20e 272 SUPERFAMILY SSF69572 5 255 4.71E-66 T 13-09-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PMA3_RS04780 5fa0a83074d1c190448c436b6f75c20e 272 PANTHER PTHR10953:SF159 195 263 1.1E-116 T 13-09-2016 PMA3_RS04780 5fa0a83074d1c190448c436b6f75c20e 272 Gene3D G3DSA:3.40.50.720 6 264 4.2E-53 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04780 5fa0a83074d1c190448c436b6f75c20e 272 Pfam PF00899 ThiF family 17 258 4.6E-40 T 13-09-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PMA3_RS04780 5fa0a83074d1c190448c436b6f75c20e 272 PANTHER PTHR10953 1 162 1.1E-116 T 13-09-2016 PMA3_RS04780 5fa0a83074d1c190448c436b6f75c20e 272 PANTHER PTHR10953 195 263 1.1E-116 T 13-09-2016 PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 SUPERFAMILY SSF52058 1142 1290 5.27E-21 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 PANTHER PTHR23155 1129 1268 7.0E-13 T 13-09-2016 PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 PANTHER PTHR23155:SF443 1129 1268 7.0E-13 T 13-09-2016 PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 Gene3D G3DSA:1.20.58.360 1430 1579 3.3E-33 T 13-09-2016 PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 Gene3D G3DSA:1.20.1270.130 1359 1423 1.2E-6 T 13-09-2016 PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 1348 1580 1.7E-44 T 13-09-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 SMART SM00369 1177 1198 38.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 SMART SM00369 1226 1247 170.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 SMART SM00369 1200 1223 35.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 SMART SM00369 1248 1271 14.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS02380 88bf44c870b1d55a08e9e800ce91c33f 1634 Gene3D G3DSA:3.80.10.10 1142 1291 1.7E-24 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS07285 380649341a3461575ba745c3acee3412 578 Gene3D G3DSA:2.60.40.1250 23 138 6.8E-35 T 13-09-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PMA3_RS07285 380649341a3461575ba745c3acee3412 578 SUPERFAMILY SSF74863 25 135 5.62E-33 T 13-09-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PMA3_RS07285 380649341a3461575ba745c3acee3412 578 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 575 38.191 T 13-09-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PMA3_RS07285 380649341a3461575ba745c3acee3412 578 Gene3D G3DSA:3.40.30.10 468 570 9.3E-25 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07285 380649341a3461575ba745c3acee3412 578 SUPERFAMILY SSF52833 471 569 1.35E-19 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS07285 380649341a3461575ba745c3acee3412 578 PANTHER PTHR32234:SF0 1 578 3.3E-181 T 13-09-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PMA3_RS07285 380649341a3461575ba745c3acee3412 578 ProSitePatterns PS00194 Thioredoxin family active site. 483 501 - T 13-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PMA3_RS07285 380649341a3461575ba745c3acee3412 578 PANTHER PTHR32234 1 578 3.3E-181 T 13-09-2016 PMA3_RS07285 380649341a3461575ba745c3acee3412 578 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 168 371 5.4E-13 T 13-09-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PMA3_RS07285 380649341a3461575ba745c3acee3412 578 Pfam PF13899 Thioredoxin-like 467 535 1.9E-11 T 13-09-2016 PMA3_RS07285 380649341a3461575ba745c3acee3412 578 Pfam PF11412 Disulphide bond corrector protein DsbC 27 134 5.5E-27 T 13-09-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PMA3_RS00460 61c70eb4a76a0b6964c8c5d154362954 501 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 483 6.6E-109 T 13-09-2016 IPR010352 Protein of unknown function DUF945 PMA3_RS24230 427207f49f03f5ccbdbae8165e526ec9 382 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 7 354 72.442 T 13-09-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS24230 427207f49f03f5ccbdbae8165e526ec9 382 SUPERFAMILY SSF102114 107 322 7.26E-14 T 13-09-2016 PMA3_RS24230 427207f49f03f5ccbdbae8165e526ec9 382 PIRSF PIRSF006004 4 367 6.2E-151 T 13-09-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS24230 427207f49f03f5ccbdbae8165e526ec9 382 PANTHER PTHR30544:SF5 1 361 6.2E-179 T 13-09-2016 PMA3_RS24230 427207f49f03f5ccbdbae8165e526ec9 382 Gene3D G3DSA:3.20.20.70 107 334 5.8E-14 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS24230 427207f49f03f5ccbdbae8165e526ec9 382 Pfam PF04055 Radical SAM superfamily 111 284 7.7E-17 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS24230 427207f49f03f5ccbdbae8165e526ec9 382 PANTHER PTHR30544 1 361 6.2E-179 T 13-09-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS24230 427207f49f03f5ccbdbae8165e526ec9 382 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 4 358 5.0E-144 T 13-09-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PMA3_RS10735 32d5bfe8649840890e31f31a3d1489e2 105 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 98 1.8E-35 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS10735 32d5bfe8649840890e31f31a3d1489e2 105 Pfam PF09498 Protein of unknown function (DUF2388) 28 97 4.3E-30 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS24645 436197f896f77e8bfba04332f289cb5e 521 PANTHER PTHR13285:SF23 1 433 2.0E-111 T 13-09-2016 PMA3_RS24645 436197f896f77e8bfba04332f289cb5e 521 PIRSF PIRSF016636 468 521 0.015 T 13-09-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB PMA3_RS24645 436197f896f77e8bfba04332f289cb5e 521 PIRSF PIRSF500217 1 521 3.1E-157 T 13-09-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 PMA3_RS24645 436197f896f77e8bfba04332f289cb5e 521 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 150 376 3.5E-27 T 13-09-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT PMA3_RS24645 436197f896f77e8bfba04332f289cb5e 521 PANTHER PTHR13285 1 433 2.0E-111 T 13-09-2016 PMA3_RS25695 71cc3fb2cf8048e713759b51d424eb73 466 Pfam PF13148 Protein of unknown function (DUF3987) 45 390 1.3E-77 T 13-09-2016 IPR025048 Protein of unknown function DUF3987) PMA3_RS25885 c7426e6eda9d9af6080f569b95f112d1 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 73 2.6E-15 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS25885 c7426e6eda9d9af6080f569b95f112d1 315 Pfam PF03466 LysR substrate binding domain 100 296 7.3E-26 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS25885 c7426e6eda9d9af6080f569b95f112d1 315 PANTHER PTHR30579:SF3 6 311 1.4E-70 T 13-09-2016 PMA3_RS25885 c7426e6eda9d9af6080f569b95f112d1 315 SUPERFAMILY SSF46785 11 121 2.72E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25885 c7426e6eda9d9af6080f569b95f112d1 315 Gene3D G3DSA:1.10.10.10 11 93 2.3E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS25885 c7426e6eda9d9af6080f569b95f112d1 315 Gene3D G3DSA:3.40.190.10 102 201 4.3E-17 T 13-09-2016 PMA3_RS25885 c7426e6eda9d9af6080f569b95f112d1 315 SUPERFAMILY SSF53850 100 299 1.09E-31 T 13-09-2016 PMA3_RS25885 c7426e6eda9d9af6080f569b95f112d1 315 PANTHER PTHR30579 6 311 1.4E-70 T 13-09-2016 PMA3_RS18290 670cca8d53c127edd8350524ff6eb4ce 507 Gene3D G3DSA:3.40.605.10 11 265 1.6E-91 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS18290 670cca8d53c127edd8350524ff6eb4ce 507 Gene3D G3DSA:3.40.309.10 266 460 9.4E-62 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS18290 670cca8d53c127edd8350524ff6eb4ce 507 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 12 491 2.1E-206 T 13-09-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 PMA3_RS18290 670cca8d53c127edd8350524ff6eb4ce 507 SUPERFAMILY SSF53720 9 492 4.32E-146 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS18290 670cca8d53c127edd8350524ff6eb4ce 507 PANTHER PTHR11699:SF188 1 495 4.2E-272 T 13-09-2016 PMA3_RS18290 670cca8d53c127edd8350524ff6eb4ce 507 PANTHER PTHR11699 1 495 4.2E-272 T 13-09-2016 PMA3_RS18290 670cca8d53c127edd8350524ff6eb4ce 507 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS18290 670cca8d53c127edd8350524ff6eb4ce 507 Pfam PF00171 Aldehyde dehydrogenase family 25 487 1.3E-141 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS05300 3275408548618c16c968af7cb56e1528 199 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 170 6.7E-12 T 13-09-2016 PMA3_RS05300 3275408548618c16c968af7cb56e1528 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 1.6E-7 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS05300 3275408548618c16c968af7cb56e1528 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.6E-7 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS05300 3275408548618c16c968af7cb56e1528 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 1.6E-7 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS05300 3275408548618c16c968af7cb56e1528 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 1.6E-7 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS05300 3275408548618c16c968af7cb56e1528 199 SUPERFAMILY SSF51735 1 199 9.48E-25 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS05300 3275408548618c16c968af7cb56e1528 199 Gene3D G3DSA:3.40.50.720 1 198 1.9E-40 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS00240 c20685f69526996968484c9efff477c6 105 Pfam PF09498 Protein of unknown function (DUF2388) 36 104 7.2E-32 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS00240 c20685f69526996968484c9efff477c6 105 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 104 4.0E-37 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS22175 3d0db83a4673e992ce0119d3f0926a9a 430 SUPERFAMILY SSF56935 97 430 1.68E-8 T 13-09-2016 PMA3_RS22175 3d0db83a4673e992ce0119d3f0926a9a 430 Pfam PF16930 Putative porin 356 430 5.3E-8 T 13-09-2016 IPR032638 Putative bacterial porin PMA3_RS22175 3d0db83a4673e992ce0119d3f0926a9a 430 Pfam PF16930 Putative porin 118 290 5.0E-40 T 13-09-2016 IPR032638 Putative bacterial porin PMA3_RS22175 3d0db83a4673e992ce0119d3f0926a9a 430 Gene3D G3DSA:2.40.160.20 216 291 3.5E-4 T 13-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PMA3_RS22515 b3c40a8cf7d7e021cc4ab8c8b59ec3ce 349 PANTHER PTHR21716 6 349 3.7E-137 T 13-09-2016 IPR002549 Transmembrane protein TqsA-like PMA3_RS22515 b3c40a8cf7d7e021cc4ab8c8b59ec3ce 349 Pfam PF01594 Domain of unknown function DUF20 20 344 3.2E-68 T 13-09-2016 IPR002549 Transmembrane protein TqsA-like PMA3_RS22515 b3c40a8cf7d7e021cc4ab8c8b59ec3ce 349 PANTHER PTHR21716:SF19 6 349 3.7E-137 T 13-09-2016 PMA3_RS20235 4feede30775d3cc5077c0432206123b3 160 Gene3D G3DSA:3.30.530.20 3 152 4.0E-31 T 13-09-2016 IPR023393 START-like domain PMA3_RS20235 4feede30775d3cc5077c0432206123b3 160 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 150 3.3E-13 T 13-09-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 PMA3_RS20235 4feede30775d3cc5077c0432206123b3 160 SUPERFAMILY SSF55961 4 152 1.27E-25 T 13-09-2016 PMA3_RS28955 35815fcb0f89fa5ca45797c363256aa0 442 Pfam PF03573 outer membrane porin, OprD family 22 441 1.0E-126 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS28955 35815fcb0f89fa5ca45797c363256aa0 442 PANTHER PTHR34596 6 257 2.9E-113 T 13-09-2016 PMA3_RS28955 35815fcb0f89fa5ca45797c363256aa0 442 PANTHER PTHR34596 273 442 2.9E-113 T 13-09-2016 PMA3_RS28955 35815fcb0f89fa5ca45797c363256aa0 442 Gene3D G3DSA:2.40.160.10 27 442 2.5E-133 T 13-09-2016 IPR023614 Porin domain PMA3_RS22020 0442e21c78a0b892779fb976c674d9ed 452 Pfam PF02321 Outer membrane efflux protein 27 213 2.4E-15 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS22020 0442e21c78a0b892779fb976c674d9ed 452 Pfam PF02321 Outer membrane efflux protein 238 408 1.4E-26 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS22020 0442e21c78a0b892779fb976c674d9ed 452 PANTHER PTHR30026 10 448 1.0E-64 T 13-09-2016 PMA3_RS22020 0442e21c78a0b892779fb976c674d9ed 452 SUPERFAMILY SSF56954 3 425 3.14E-76 T 13-09-2016 PMA3_RS22020 0442e21c78a0b892779fb976c674d9ed 452 Gene3D G3DSA:1.20.1600.10 19 426 5.5E-59 T 13-09-2016 PMA3_RS22020 0442e21c78a0b892779fb976c674d9ed 452 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 2.7E-88 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS22020 0442e21c78a0b892779fb976c674d9ed 452 PANTHER PTHR30026:SF4 10 448 1.0E-64 T 13-09-2016 PMA3_RS21845 cae0e06769b3407ea7a6bec196d2c2e5 404 PANTHER PTHR23517 1 387 8.1E-140 T 13-09-2016 PMA3_RS21845 cae0e06769b3407ea7a6bec196d2c2e5 404 SUPERFAMILY SSF103473 12 399 5.23E-47 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS21845 cae0e06769b3407ea7a6bec196d2c2e5 404 PANTHER PTHR23517:SF4 1 387 8.1E-140 T 13-09-2016 PMA3_RS21845 cae0e06769b3407ea7a6bec196d2c2e5 404 Gene3D G3DSA:1.20.1250.20 219 400 3.9E-24 T 13-09-2016 PMA3_RS21845 cae0e06769b3407ea7a6bec196d2c2e5 404 Gene3D G3DSA:1.20.1250.20 14 192 1.2E-13 T 13-09-2016 PMA3_RS21845 cae0e06769b3407ea7a6bec196d2c2e5 404 Pfam PF07690 Major Facilitator Superfamily 220 399 1.5E-15 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 Gene3D G3DSA:1.10.10.10 1 86 1.2E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.3E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.3E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.3E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 SUPERFAMILY SSF53850 88 289 2.39E-36 T 13-09-2016 PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 Pfam PF03466 LysR substrate binding domain 87 289 2.1E-38 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 PANTHER PTHR30427 1 289 1.0E-78 T 13-09-2016 PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.9E-19 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 Gene3D G3DSA:3.40.190.10 88 179 1.8E-16 T 13-09-2016 PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 SUPERFAMILY SSF46785 1 80 6.61E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 Gene3D G3DSA:3.40.190.10 180 258 6.7E-19 T 13-09-2016 PMA3_RS13995 ee588c832315fab5831d810b9258ea00 289 PANTHER PTHR30427:SF1 1 289 1.0E-78 T 13-09-2016 PMA3_RS13230 f5765009120a299673572682e5c5566b 435 SUPERFAMILY SSF103515 291 367 3.53E-5 T 13-09-2016 IPR005546 Autotransporter beta-domain PMA3_RS24790 c5f1446f743b84d984654a9a2b3fd907 433 TIGRFAM TIGR00814 stp: serine transporter 27 422 5.0E-166 T 13-09-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 PMA3_RS24790 c5f1446f743b84d984654a9a2b3fd907 433 PANTHER PTHR35334:SF2 5 433 3.9E-252 T 13-09-2016 PMA3_RS24790 c5f1446f743b84d984654a9a2b3fd907 433 PANTHER PTHR35334 5 433 3.9E-252 T 13-09-2016 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 PANTHER PTHR11019 1 283 7.7E-49 T 13-09-2016 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 SUPERFAMILY SSF51215 26 153 1.28E-9 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 SUPERFAMILY SSF46689 174 221 5.82E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 SMART SM00342 191 275 1.9E-20 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 Gene3D G3DSA:1.10.10.60 173 228 8.6E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 Gene3D G3DSA:1.10.10.60 229 276 3.3E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 SUPERFAMILY SSF46689 228 276 1.21E-7 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 Pfam PF12833 Helix-turn-helix domain 198 276 2.9E-17 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 Gene3D G3DSA:2.60.120.280 26 155 4.4E-5 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 Pfam PF02311 AraC-like ligand binding domain 26 125 2.3E-6 T 13-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PMA3_RS09850 40375ad79dc755e2137280291e8a2eeb 284 PANTHER PTHR11019:SF139 1 283 7.7E-49 T 13-09-2016 PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 SMART SM00100 31 154 0.0033 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 SUPERFAMILY SSF51206 23 162 3.01E-19 T 13-09-2016 IPR018490 Cyclic nucleotide-binding-like PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 SUPERFAMILY SSF54631 178 295 4.04E-27 T 13-09-2016 PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 Pfam PF00571 CBS domain 248 296 1.5E-6 T 13-09-2016 IPR000644 CBS domain PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 Pfam PF00571 CBS domain 180 234 4.7E-10 T 13-09-2016 IPR000644 CBS domain PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 Pfam PF03445 Putative nucleotidyltransferase DUF294 323 462 2.8E-42 T 13-09-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 499 642 1.1E-44 T 13-09-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 PANTHER PTHR11911 174 294 2.7E-21 T 13-09-2016 PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 Gene3D G3DSA:2.60.120.10 24 164 4.4E-15 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 Gene3D G3DSA:3.10.580.10 175 294 2.0E-31 T 13-09-2016 PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 SMART SM00116 251 298 0.65 T 13-09-2016 IPR000644 CBS domain PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 SMART SM00116 186 234 1.1E-7 T 13-09-2016 IPR000644 CBS domain PMA3_RS27840 a9c9e7e50d0cb0cdea8f6eb9c2d07140 644 Pfam PF00027 Cyclic nucleotide-binding domain 50 137 1.2E-10 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS28930 1e5e963ab95a7ebf8d2d3ca8de6d91b5 382 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 70.548 T 13-09-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 PMA3_RS28930 1e5e963ab95a7ebf8d2d3ca8de6d91b5 382 SUPERFAMILY SSF51679 3 349 4.71E-96 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS28930 1e5e963ab95a7ebf8d2d3ca8de6d91b5 382 Pfam PF00296 Luciferase-like monooxygenase 4 325 9.0E-85 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS28930 1e5e963ab95a7ebf8d2d3ca8de6d91b5 382 PANTHER PTHR30011 1 380 2.7E-215 T 13-09-2016 PMA3_RS28930 1e5e963ab95a7ebf8d2d3ca8de6d91b5 382 Gene3D G3DSA:3.20.20.30 3 253 8.8E-102 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS28930 1e5e963ab95a7ebf8d2d3ca8de6d91b5 382 Gene3D G3DSA:3.20.20.30 287 350 8.8E-102 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS28930 1e5e963ab95a7ebf8d2d3ca8de6d91b5 382 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 1.7E-191 T 13-09-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 PMA3_RS28930 1e5e963ab95a7ebf8d2d3ca8de6d91b5 382 PANTHER PTHR30011:SF1 1 380 2.7E-215 T 13-09-2016 PMA3_RS05225 48d7fca51ba1515cc65a1ce46be5e7f5 92 Pfam PF06611 Protein of unknown function (DUF1145) 4 58 1.0E-14 T 13-09-2016 IPR009525 Protein of unknown function DUF1145 PMA3_RS05225 48d7fca51ba1515cc65a1ce46be5e7f5 92 PANTHER PTHR38775:SF1 2 92 9.8E-18 T 13-09-2016 PMA3_RS05225 48d7fca51ba1515cc65a1ce46be5e7f5 92 PANTHER PTHR38775 2 92 9.8E-18 T 13-09-2016 PMA3_RS00805 d132e79fac5d9e7be9b4195765933513 301 PANTHER PTHR21621:SF0 1 288 1.7E-126 T 13-09-2016 PMA3_RS00805 d132e79fac5d9e7be9b4195765933513 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.775 T 13-09-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK PMA3_RS00805 d132e79fac5d9e7be9b4195765933513 301 Gene3D G3DSA:3.30.1490.20 103 172 8.5E-7 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS00805 d132e79fac5d9e7be9b4195765933513 301 Pfam PF08443 RimK-like ATP-grasp domain 98 285 2.0E-67 T 13-09-2016 IPR013651 ATP-grasp fold, RimK-type PMA3_RS00805 d132e79fac5d9e7be9b4195765933513 301 PANTHER PTHR21621 1 288 1.7E-126 T 13-09-2016 PMA3_RS00805 d132e79fac5d9e7be9b4195765933513 301 SUPERFAMILY SSF56059 98 288 1.28E-47 T 13-09-2016 PMA3_RS00805 d132e79fac5d9e7be9b4195765933513 301 Gene3D G3DSA:3.30.470.20 173 275 1.2E-35 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS00805 d132e79fac5d9e7be9b4195765933513 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 285 1.0E-84 T 13-09-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 PMA3_RS00805 d132e79fac5d9e7be9b4195765933513 301 Gene3D G3DSA:3.40.50.20 8 102 6.6E-17 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS09805 39affef188da99fd8ceee041ed3e707e 472 PANTHER PTHR11819 4 428 3.5E-52 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS09805 39affef188da99fd8ceee041ed3e707e 472 Pfam PF00474 Sodium:solute symporter family 35 413 3.2E-27 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 Gene3D G3DSA:3.30.160.20 152 223 8.8E-23 T 13-09-2016 IPR014720 Double-stranded RNA-binding domain PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 SMART SM00358 155 223 1.1E-18 T 13-09-2016 IPR014720 Double-stranded RNA-binding domain PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 Pfam PF00035 Double-stranded RNA binding motif 155 219 2.9E-9 T 13-09-2016 IPR014720 Double-stranded RNA-binding domain PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 SUPERFAMILY SSF54768 108 226 2.04E-25 T 13-09-2016 PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 PANTHER PTHR11207 5 219 4.1E-87 T 13-09-2016 PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 SUPERFAMILY SSF69065 3 157 3.84E-48 T 13-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 Pfam PF14622 Ribonuclease-III-like 18 139 8.3E-35 T 13-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 Gene3D G3DSA:1.10.1520.10 5 139 4.7E-45 T 13-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 SMART SM00535 20 148 1.1E-51 T 13-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.189 T 13-09-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 13-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PMA3_RS04375 1aa332f51eef30bce613f8050635f48d 229 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 220 5.3E-69 T 13-09-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 PMA3_RS06035 0867c5e766da155503937f5206df023c 268 Pfam PF16234 Domain of unknown function (DUF4892) 20 202 3.0E-98 T 13-09-2016 IPR032608 Protein of unknown function DUF4892 PMA3_RS15205 8bd6ad08992f7c368c7afc6289657352 414 Pfam PF00149 Calcineurin-like phosphoesterase 2 232 1.2E-14 T 13-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PMA3_RS15205 8bd6ad08992f7c368c7afc6289657352 414 PANTHER PTHR30337:SF0 1 353 5.0E-92 T 13-09-2016 PMA3_RS15205 8bd6ad08992f7c368c7afc6289657352 414 Gene3D G3DSA:3.60.21.10 1 277 1.4E-60 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS15205 8bd6ad08992f7c368c7afc6289657352 414 PANTHER PTHR30337 1 353 5.0E-92 T 13-09-2016 PMA3_RS15205 8bd6ad08992f7c368c7afc6289657352 414 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 4.9E-51 T 13-09-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 PMA3_RS15205 8bd6ad08992f7c368c7afc6289657352 414 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 284 386 2.6E-14 T 13-09-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain PMA3_RS15205 8bd6ad08992f7c368c7afc6289657352 414 SUPERFAMILY SSF56300 1 348 1.38E-50 T 13-09-2016 IPR029052 Metallo-dependent phosphatase-like PMA3_RS14180 934ceb921102f59f55bdf64b4bb348d5 358 Gene3D G3DSA:2.130.10.10 55 314 1.7E-27 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS14180 934ceb921102f59f55bdf64b4bb348d5 358 Pfam PF14870 Photosynthesis system II assembly factor YCF48 59 120 4.2E-8 T 13-09-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain PMA3_RS14180 934ceb921102f59f55bdf64b4bb348d5 358 Pfam PF14870 Photosynthesis system II assembly factor YCF48 163 291 5.1E-12 T 13-09-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain PMA3_RS14180 934ceb921102f59f55bdf64b4bb348d5 358 SUPERFAMILY SSF50939 46 307 1.06E-37 T 13-09-2016 IPR011040 Sialidases PMA3_RS23970 776a1be32fdddf17842f2814b6eea33a 1297 Pfam PF00856 SET domain 1215 1291 2.1E-4 T 13-09-2016 IPR001214 SET domain GO:0005515 PMA3_RS23970 776a1be32fdddf17842f2814b6eea33a 1297 Gene3D G3DSA:2.170.270.10 1172 1296 3.4E-7 T 13-09-2016 PMA3_RS23970 776a1be32fdddf17842f2814b6eea33a 1297 SUPERFAMILY SSF82199 1159 1294 1.04E-9 T 13-09-2016 PMA3_RS22510 ddfee2225fe5e69142b3782ba7bfdb0d 157 Pfam PF00578 AhpC/TSA family 5 133 1.7E-34 T 13-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS22510 ddfee2225fe5e69142b3782ba7bfdb0d 157 PANTHER PTHR10681 1 154 8.1E-46 T 13-09-2016 PMA3_RS22510 ddfee2225fe5e69142b3782ba7bfdb0d 157 Gene3D G3DSA:3.40.30.10 2 154 1.5E-47 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS22510 ddfee2225fe5e69142b3782ba7bfdb0d 157 SUPERFAMILY SSF52833 4 154 3.39E-48 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS22510 ddfee2225fe5e69142b3782ba7bfdb0d 157 PIRSF PIRSF000239 1 157 3.6E-26 T 13-09-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PMA3_RS24640 89706ac8f6ac7a2c655e921938f93661 373 Gene3D G3DSA:1.50.10.110 6 365 2.2E-105 T 13-09-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 PMA3_RS24640 89706ac8f6ac7a2c655e921938f93661 373 SUPERFAMILY SSF48230 24 363 4.67E-62 T 13-09-2016 IPR008929 Chondroitin AC/alginate lyase PMA3_RS24640 89706ac8f6ac7a2c655e921938f93661 373 Pfam PF05426 Alginate lyase 64 305 2.4E-63 T 13-09-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 PMA3_RS24640 89706ac8f6ac7a2c655e921938f93661 373 Hamap MF_00557 Alginate lyase [algL]. 5 371 75.054 T 13-09-2016 IPR022859 Alginate lyase GO:0042122|GO:0042597|GO:0045135 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 PMA3_RS26670 6eebf24effb83276ac87346369e95183 213 Pfam PF13460 NAD(P)H-binding 12 152 1.1E-7 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26670 6eebf24effb83276ac87346369e95183 213 PANTHER PTHR14097:SF7 1 213 1.6E-66 T 13-09-2016 PMA3_RS26670 6eebf24effb83276ac87346369e95183 213 SUPERFAMILY SSF51735 5 197 5.24E-42 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26670 6eebf24effb83276ac87346369e95183 213 Gene3D G3DSA:3.40.50.720 3 211 1.6E-47 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26670 6eebf24effb83276ac87346369e95183 213 PANTHER PTHR14097 1 213 1.6E-66 T 13-09-2016 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 PANTHER PTHR26402:SF458 2 205 5.9E-42 T 13-09-2016 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 SUPERFAMILY SSF52172 3 131 8.97E-21 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS15870 5064786855553c6adc99b0304833306d 212 Gene3D G3DSA:3.40.50.2300 2 120 5.1E-21 T 13-09-2016 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 SUPERFAMILY SSF46894 139 210 2.31E-16 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 SMART SM00448 2 116 2.2E-12 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-9 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-9 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-9 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 SMART SM00421 148 205 1.4E-14 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 Pfam PF00072 Response regulator receiver domain 4 116 2.3E-16 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 PANTHER PTHR26402 2 205 5.9E-42 T 13-09-2016 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.1E-14 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS15870 5064786855553c6adc99b0304833306d 212 Gene3D G3DSA:1.10.10.10 121 210 1.0E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09285 f7ea4f2c4372d68ad9f66d2e7df7fb70 96 Pfam PF07867 Protein of unknown function (DUF1654) 27 95 7.5E-32 T 13-09-2016 IPR012449 Bacteriophage F116, Orf28 PMA3_RS09150 2705896b299ce0f6ed703fb6abcb5733 257 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 26 213 2.1E-35 T 13-09-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PMA3_RS09150 2705896b299ce0f6ed703fb6abcb5733 257 PANTHER PTHR30502 1 250 3.2E-64 T 13-09-2016 PMA3_RS09150 2705896b299ce0f6ed703fb6abcb5733 257 PANTHER PTHR30502:SF0 1 250 3.2E-64 T 13-09-2016 PMA3_RS09150 2705896b299ce0f6ed703fb6abcb5733 257 SUPERFAMILY SSF51621 1 251 9.77E-71 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS09150 2705896b299ce0f6ed703fb6abcb5733 257 Gene3D G3DSA:3.20.20.60 3 251 1.6E-64 T 13-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PMA3_RS24440 312a02693417030f429ea3fea964aee3 319 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 12 300 1.1E-55 T 13-09-2016 IPR025859 P-aminobenzoate N-oxygenase AurF PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 Pfam PF03466 LysR substrate binding domain 88 292 1.3E-31 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 Gene3D G3DSA:3.40.190.10 180 260 1.5E-8 T 13-09-2016 PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 SUPERFAMILY SSF53850 89 296 2.71E-34 T 13-09-2016 PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 PANTHER PTHR30126 1 292 5.7E-58 T 13-09-2016 PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 SUPERFAMILY SSF46785 1 87 1.91E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 Gene3D G3DSA:3.40.190.10 89 179 2.4E-19 T 13-09-2016 PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-20 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-9 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS18245 767b4c08d951644648e0a4bee3d9887f 303 Gene3D G3DSA:1.10.10.10 1 87 2.8E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 Gene3D G3DSA:3.30.70.270 193 360 1.7E-50 T 13-09-2016 PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 Pfam PF00563 EAL domain 370 602 6.4E-70 T 13-09-2016 IPR001633 EAL domain PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 PANTHER PTHR33121 337 617 3.5E-85 T 13-09-2016 PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 PANTHER PTHR33121:SF13 337 617 3.5E-85 T 13-09-2016 PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 SUPERFAMILY SSF55073 196 352 7.85E-43 T 13-09-2016 IPR029787 Nucleotide cyclase PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 349 5.0E-35 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 SUPERFAMILY SSF52172 9 182 1.09E-13 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 SUPERFAMILY SSF141868 368 616 2.22E-92 T 13-09-2016 IPR001633 EAL domain PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 SMART SM00052 362 608 8.3E-121 T 13-09-2016 IPR001633 EAL domain PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 347 9.9E-44 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 Gene3D G3DSA:3.40.50.2300 8 165 3.2E-29 T 13-09-2016 PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 SMART SM00267 178 352 1.9E-51 T 13-09-2016 IPR000160 GGDEF domain PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 Gene3D G3DSA:3.20.20.450 366 615 1.3E-101 T 13-09-2016 IPR001633 EAL domain PMA3_RS23915 f3db86e7c88ecdbb703556cc42c68fa6 624 Pfam PF00072 Response regulator receiver domain 58 152 2.0E-7 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS01840 cd13e40572e224c568071e0e6f51069f 318 Pfam PF13524 Glycosyl transferases group 1 209 292 8.7E-10 T 13-09-2016 PMA3_RS01840 cd13e40572e224c568071e0e6f51069f 318 SUPERFAMILY SSF53756 71 297 1.63E-13 T 13-09-2016 PMA3_RS24775 976dd0005a876d51eb39ba345672a3cb 136 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 9 101 3.9E-9 T 13-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PMA3_RS24775 976dd0005a876d51eb39ba345672a3cb 136 Gene3D G3DSA:3.30.160.100 1 102 1.5E-10 T 13-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PMA3_RS24775 976dd0005a876d51eb39ba345672a3cb 136 SUPERFAMILY SSF69754 1 95 3.14E-10 T 13-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 Gene3D G3DSA:3.40.50.150 97 287 1.5E-67 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 Gene3D G3DSA:3.40.50.150 332 474 1.5E-67 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 PANTHER PTHR13370 98 130 4.9E-21 T 13-09-2016 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 PANTHER PTHR13370 237 586 4.9E-21 T 13-09-2016 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 PANTHER PTHR13370:SF7 98 130 4.9E-21 T 13-09-2016 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 13-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 PANTHER PTHR13370:SF7 237 586 4.9E-21 T 13-09-2016 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 417 431 1.4E-13 T 13-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 184 203 1.4E-13 T 13-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 392 414 1.4E-13 T 13-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 121 133 1.4E-13 T 13-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 Pfam PF01555 DNA methylase 121 437 3.4E-36 T 13-09-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 PIRSF PIRSF015855 1 629 4.9E-182 T 13-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 SUPERFAMILY SSF53335 360 452 9.02E-59 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 SUPERFAMILY SSF53335 90 140 9.02E-59 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS26835 926a7144837db9ef3addae489ee38901 629 SUPERFAMILY SSF53335 172 310 9.02E-59 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS17645 038f2fe4775b3d040209e9cb283a45fe 516 SUPERFAMILY SSF53822 163 514 2.08E-39 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS17645 038f2fe4775b3d040209e9cb283a45fe 516 Gene3D G3DSA:3.40.50.2300 416 487 1.5E-24 T 13-09-2016 PMA3_RS17645 038f2fe4775b3d040209e9cb283a45fe 516 Gene3D G3DSA:3.40.50.2300 160 285 1.5E-24 T 13-09-2016 PMA3_RS17645 038f2fe4775b3d040209e9cb283a45fe 516 PANTHER PTHR30483 104 295 6.5E-17 T 13-09-2016 PMA3_RS17645 038f2fe4775b3d040209e9cb283a45fe 516 Pfam PF00034 Cytochrome c 63 151 4.8E-5 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS17645 038f2fe4775b3d040209e9cb283a45fe 516 Gene3D G3DSA:1.10.760.10 31 154 1.8E-7 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS17645 038f2fe4775b3d040209e9cb283a45fe 516 PANTHER PTHR30483:SF11 104 295 6.5E-17 T 13-09-2016 PMA3_RS17645 038f2fe4775b3d040209e9cb283a45fe 516 SUPERFAMILY SSF46626 26 161 1.32E-10 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS17645 038f2fe4775b3d040209e9cb283a45fe 516 Pfam PF13458 Periplasmic binding protein 164 497 1.4E-33 T 13-09-2016 IPR028081 Leucine-binding protein domain PMA3_RS06370 2b1e505cfdbefbe47bdb9a77acdf86ec 721 SUPERFAMILY SSF52833 597 703 3.69E-13 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06370 2b1e505cfdbefbe47bdb9a77acdf86ec 721 Pfam PF11412 Disulphide bond corrector protein DsbC 50 170 1.0E-18 T 13-09-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PMA3_RS06370 2b1e505cfdbefbe47bdb9a77acdf86ec 721 Pfam PF13899 Thioredoxin-like 601 683 6.0E-17 T 13-09-2016 PMA3_RS06370 2b1e505cfdbefbe47bdb9a77acdf86ec 721 PANTHER PTHR32234:SF3 5 711 1.1E-162 T 13-09-2016 PMA3_RS06370 2b1e505cfdbefbe47bdb9a77acdf86ec 721 Gene3D G3DSA:3.40.30.10 596 685 8.2E-13 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06370 2b1e505cfdbefbe47bdb9a77acdf86ec 721 PANTHER PTHR32234 5 711 1.1E-162 T 13-09-2016 PMA3_RS06370 2b1e505cfdbefbe47bdb9a77acdf86ec 721 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 322 497 3.7E-10 T 13-09-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PMA3_RS06370 2b1e505cfdbefbe47bdb9a77acdf86ec 721 ProSitePatterns PS00194 Thioredoxin family active site. 616 634 - T 13-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PMA3_RS00030 d922a2c80babf0d621782bc3c03466b4 261 PANTHER PTHR24220:SF466 7 243 2.5E-107 T 13-09-2016 PMA3_RS00030 d922a2c80babf0d621782bc3c03466b4 261 PANTHER PTHR24220 7 243 2.5E-107 T 13-09-2016 PMA3_RS00030 d922a2c80babf0d621782bc3c03466b4 261 SUPERFAMILY SSF52540 3 214 2.45E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00030 d922a2c80babf0d621782bc3c03466b4 261 Pfam PF00005 ABC transporter 21 149 1.3E-27 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS00030 d922a2c80babf0d621782bc3c03466b4 261 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS00030 d922a2c80babf0d621782bc3c03466b4 261 Gene3D G3DSA:3.40.50.300 3 211 2.2E-55 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00030 d922a2c80babf0d621782bc3c03466b4 261 SMART SM00382 30 199 2.5E-11 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS18835 4392bf8b62d7c0c02c8922f8e12d0041 258 Gene3D G3DSA:1.10.3720.10 51 246 1.8E-19 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS18835 4392bf8b62d7c0c02c8922f8e12d0041 258 SUPERFAMILY SSF161098 53 234 5.63E-28 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS18835 4392bf8b62d7c0c02c8922f8e12d0041 258 PANTHER PTHR30151:SF17 8 253 1.7E-135 T 13-09-2016 PMA3_RS18835 4392bf8b62d7c0c02c8922f8e12d0041 258 PANTHER PTHR30151 8 253 1.7E-135 T 13-09-2016 PMA3_RS18835 4392bf8b62d7c0c02c8922f8e12d0041 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 246 2.3E-26 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28390 fe249af00f82a422c97de5c9cef8729f 151 SUPERFAMILY SSF50341 2 108 1.31E-10 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS28390 fe249af00f82a422c97de5c9cef8729f 151 Pfam PF01584 CheW-like domain 11 107 6.4E-9 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS28390 fe249af00f82a422c97de5c9cef8729f 151 SMART SM00260 6 142 0.0088 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS16920 9d8752a9317a836b55df094edfe50290 329 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 38 296 1.2E-59 T 13-09-2016 IPR031811 AlgX, SGNH hydrolase-like domain KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 PMA3_RS15075 c6204f3f9a88ec665639664365a34f77 311 PANTHER PTHR33608:SF6 13 311 9.5E-81 T 13-09-2016 PMA3_RS15075 c6204f3f9a88ec665639664365a34f77 311 Pfam PF01882 Protein of unknown function DUF58 48 132 5.9E-20 T 13-09-2016 IPR002881 Domain of unknown function DUF58 PMA3_RS15075 c6204f3f9a88ec665639664365a34f77 311 PANTHER PTHR33608 13 311 9.5E-81 T 13-09-2016 PMA3_RS16825 1cfff40904cfe82f9f39a7b1103ca366 557 Pfam PF00474 Sodium:solute symporter family 67 476 6.6E-103 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS16825 1cfff40904cfe82f9f39a7b1103ca366 557 PANTHER PTHR11819:SF13 36 546 7.8E-233 T 13-09-2016 PMA3_RS16825 1cfff40904cfe82f9f39a7b1103ca366 557 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 476 1.3E-58 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS16825 1cfff40904cfe82f9f39a7b1103ca366 557 PANTHER PTHR11819 36 546 7.8E-233 T 13-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS16825 1cfff40904cfe82f9f39a7b1103ca366 557 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 182 207 - T 13-09-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 PANTHER PTHR10909:SF285 6 387 1.6E-273 T 13-09-2016 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 Gene3D G3DSA:1.20.140.10 222 386 3.1E-54 T 13-09-2016 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 4.4E-24 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 365 9.8E-35 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 219 1.5E-20 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 PANTHER PTHR10909 6 387 1.6E-273 T 13-09-2016 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 Gene3D G3DSA:2.40.110.10 121 221 1.6E-29 T 13-09-2016 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 SUPERFAMILY SSF47203 230 385 3.54E-44 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 SUPERFAMILY SSF56645 5 244 4.97E-59 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS13705 3cddbf726692b5b3b44dfb492e83f9c4 387 Gene3D G3DSA:1.10.540.10 5 117 3.7E-29 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS22245 4e1d77d839d1e7e2f3a4a52618e0ed34 314 Pfam PF03466 LysR substrate binding domain 103 308 2.9E-37 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS22245 4e1d77d839d1e7e2f3a4a52618e0ed34 314 Gene3D G3DSA:3.40.190.10 102 190 1.5E-15 T 13-09-2016 PMA3_RS22245 4e1d77d839d1e7e2f3a4a52618e0ed34 314 SUPERFAMILY SSF53850 104 312 3.41E-37 T 13-09-2016 PMA3_RS22245 4e1d77d839d1e7e2f3a4a52618e0ed34 314 PANTHER PTHR30126:SF3 13 314 7.3E-135 T 13-09-2016 PMA3_RS22245 4e1d77d839d1e7e2f3a4a52618e0ed34 314 Gene3D G3DSA:3.40.190.10 191 276 2.8E-16 T 13-09-2016 PMA3_RS22245 4e1d77d839d1e7e2f3a4a52618e0ed34 314 SUPERFAMILY SSF46785 13 123 5.39E-21 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22245 4e1d77d839d1e7e2f3a4a52618e0ed34 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 3.2E-16 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS22245 4e1d77d839d1e7e2f3a4a52618e0ed34 314 Gene3D G3DSA:1.10.10.10 14 99 1.3E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS22245 4e1d77d839d1e7e2f3a4a52618e0ed34 314 PANTHER PTHR30126 13 314 7.3E-135 T 13-09-2016 PMA3_RS27065 8abd583433e18e2111c6d192c2f3e4c7 369 Gene3D G3DSA:3.30.1490.20 127 176 3.5E-4 T 13-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PMA3_RS27065 8abd583433e18e2111c6d192c2f3e4c7 369 Pfam PF11379 Protein of unknown function (DUF3182) 10 362 2.6E-140 T 13-09-2016 IPR021519 Protein of unknown function DUF3182 PMA3_RS27065 8abd583433e18e2111c6d192c2f3e4c7 369 SUPERFAMILY SSF56059 123 229 1.91E-7 T 13-09-2016 PMA3_RS18375 c8b5b5e3d05abb086b1cee808f555d04 209 Pfam PF13410 Glutathione S-transferase, C-terminal domain 122 191 7.4E-10 T 13-09-2016 PMA3_RS18375 c8b5b5e3d05abb086b1cee808f555d04 209 Gene3D G3DSA:3.40.30.10 2 89 5.4E-22 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS18375 c8b5b5e3d05abb086b1cee808f555d04 209 PANTHER PTHR11260:SF154 1 206 3.2E-61 T 13-09-2016 PMA3_RS18375 c8b5b5e3d05abb086b1cee808f555d04 209 SUPERFAMILY SSF47616 82 206 8.77E-27 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS18375 c8b5b5e3d05abb086b1cee808f555d04 209 Gene3D G3DSA:1.20.1050.10 90 196 2.4E-35 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS18375 c8b5b5e3d05abb086b1cee808f555d04 209 SUPERFAMILY SSF52833 2 84 9.54E-16 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS18375 c8b5b5e3d05abb086b1cee808f555d04 209 PANTHER PTHR11260 1 206 3.2E-61 T 13-09-2016 PMA3_RS18375 c8b5b5e3d05abb086b1cee808f555d04 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 2.6E-7 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS00380 aff36f51469952a460b4fdf27d236a93 514 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 159 454 9.6E-75 T 13-09-2016 IPR017745 Cellulose biosynthesis protein BcsE PMA3_RS00380 aff36f51469952a460b4fdf27d236a93 514 Pfam PF10995 GGDEF I-site like or GIL domain 163 461 2.6E-91 T 13-09-2016 IPR017745 Cellulose biosynthesis protein BcsE PMA3_RS02875 acae943e4f9505b01631c77d1d6918e6 171 Pfam PF02498 BRO family, N-terminal domain 39 118 2.0E-12 T 13-09-2016 IPR003497 BRO N-terminal domain PMA3_RS02875 acae943e4f9505b01631c77d1d6918e6 171 PANTHER PTHR36180:SF2 6 131 3.2E-13 T 13-09-2016 PMA3_RS02875 acae943e4f9505b01631c77d1d6918e6 171 PANTHER PTHR36180 6 131 3.2E-13 T 13-09-2016 PMA3_RS02875 acae943e4f9505b01631c77d1d6918e6 171 SMART SM01040 33 118 6.3E-19 T 13-09-2016 IPR003497 BRO N-terminal domain PMA3_RS14615 f3981f100c9f1ad6658a0df712fbaf63 276 SMART SM00062 34 263 2.1E-29 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS14615 f3981f100c9f1ad6658a0df712fbaf63 276 PANTHER PTHR18966:SF191 18 255 4.7E-30 T 13-09-2016 PMA3_RS14615 f3981f100c9f1ad6658a0df712fbaf63 276 SUPERFAMILY SSF53850 9 262 1.42E-41 T 13-09-2016 PMA3_RS14615 f3981f100c9f1ad6658a0df712fbaf63 276 Gene3D G3DSA:3.40.190.10 31 109 2.1E-25 T 13-09-2016 PMA3_RS14615 f3981f100c9f1ad6658a0df712fbaf63 276 Gene3D G3DSA:3.40.190.10 222 262 2.1E-25 T 13-09-2016 PMA3_RS14615 f3981f100c9f1ad6658a0df712fbaf63 276 PANTHER PTHR18966 18 255 4.7E-30 T 13-09-2016 PMA3_RS14615 f3981f100c9f1ad6658a0df712fbaf63 276 Gene3D G3DSA:3.40.190.10 110 217 4.9E-12 T 13-09-2016 PMA3_RS14615 f3981f100c9f1ad6658a0df712fbaf63 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 259 1.7E-41 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS11320 82a1eeb5b40399be0f465210a3f32153 356 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 19 333 7.1E-102 T 13-09-2016 IPR010732 Type VI secretion, TssG-like PMA3_RS11320 82a1eeb5b40399be0f465210a3f32153 356 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 333 2.7E-106 T 13-09-2016 IPR010732 Type VI secretion, TssG-like PMA3_RS11320 82a1eeb5b40399be0f465210a3f32153 356 PANTHER PTHR35564:SF2 2 345 5.2E-62 T 13-09-2016 PMA3_RS11320 82a1eeb5b40399be0f465210a3f32153 356 PANTHER PTHR35564 2 345 5.2E-62 T 13-09-2016 PMA3_RS15375 badedae20c478af288618d6665bbb262 252 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 4 243 2.0E-88 T 13-09-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS15375 badedae20c478af288618d6665bbb262 252 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 225 1.5E-64 T 13-09-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS15375 badedae20c478af288618d6665bbb262 252 Pfam PF00929 Exonuclease 6 169 3.1E-37 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS15375 badedae20c478af288618d6665bbb262 252 SMART SM00479 4 178 4.3E-47 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS15375 badedae20c478af288618d6665bbb262 252 Gene3D G3DSA:3.30.420.10 4 179 1.7E-60 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS15375 badedae20c478af288618d6665bbb262 252 PANTHER PTHR30231:SF0 3 248 5.6E-111 T 13-09-2016 PMA3_RS15375 badedae20c478af288618d6665bbb262 252 PANTHER PTHR30231 3 248 5.6E-111 T 13-09-2016 PMA3_RS15375 badedae20c478af288618d6665bbb262 252 SUPERFAMILY SSF53098 3 179 9.19E-53 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS23205 626dc69936fe7ac7256f4bb51ee20e1b 352 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 346 68.994 T 13-09-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PMA3_RS23205 626dc69936fe7ac7256f4bb51ee20e1b 352 Pfam PF02445 Quinolinate synthetase A protein 34 339 2.6E-100 T 13-09-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PMA3_RS23205 626dc69936fe7ac7256f4bb51ee20e1b 352 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 30 341 8.2E-109 T 13-09-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PMA3_RS23205 626dc69936fe7ac7256f4bb51ee20e1b 352 PANTHER PTHR30573 18 351 1.3E-153 T 13-09-2016 PMA3_RS23205 626dc69936fe7ac7256f4bb51ee20e1b 352 SUPERFAMILY SSF142754 31 340 3.53E-106 T 13-09-2016 PMA3_RS03940 0348f75aa55c00b267ab634c22ee2a94 645 Pfam PF06980 Protein of unknown function (DUF1302) 31 645 9.2E-226 T 13-09-2016 IPR010727 Protein of unknown function DUF1302 PMA3_RS07460 8b689013db5267a798efe1cc75d6176a 572 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS07460 8b689013db5267a798efe1cc75d6176a 572 Gene3D G3DSA:3.40.50.300 351 562 1.2E-62 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS07460 8b689013db5267a798efe1cc75d6176a 572 Gene3D G3DSA:1.20.1560.10 22 334 4.4E-65 T 13-09-2016 PMA3_RS07460 8b689013db5267a798efe1cc75d6176a 572 SMART SM00382 376 569 1.5E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS07460 8b689013db5267a798efe1cc75d6176a 572 PANTHER PTHR24221 21 554 3.7E-165 T 13-09-2016 PMA3_RS07460 8b689013db5267a798efe1cc75d6176a 572 SUPERFAMILY SSF90123 22 334 4.19E-67 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS07460 8b689013db5267a798efe1cc75d6176a 572 Pfam PF00005 ABC transporter 368 516 3.4E-28 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS07460 8b689013db5267a798efe1cc75d6176a 572 Pfam PF00664 ABC transporter transmembrane region 41 305 1.3E-37 T 13-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PMA3_RS07460 8b689013db5267a798efe1cc75d6176a 572 SUPERFAMILY SSF52540 344 563 4.52E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02630 522bf52b04ba00ddb7e1f8537cb31062 100 SUPERFAMILY SSF101386 1 99 2.94E-29 T 13-09-2016 PMA3_RS02630 522bf52b04ba00ddb7e1f8537cb31062 100 PANTHER PTHR14552 1 99 2.5E-23 T 13-09-2016 PMA3_RS02630 522bf52b04ba00ddb7e1f8537cb31062 100 Gene3D G3DSA:1.10.287.1080 1 92 8.8E-19 T 13-09-2016 PMA3_RS02630 522bf52b04ba00ddb7e1f8537cb31062 100 Pfam PF12643 MazG-like family 31 97 8.2E-9 T 13-09-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12 PMA3_RS02630 522bf52b04ba00ddb7e1f8537cb31062 100 PIRSF PIRSF029826 1 100 6.4E-36 T 13-09-2016 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 PMA3_RS29725 e717d0685adcdf038bc9dc07143365a9 299 Gene3D G3DSA:2.70.98.10 4 294 2.7E-83 T 13-09-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PMA3_RS29725 e717d0685adcdf038bc9dc07143365a9 299 PANTHER PTHR11122:SF14 10 299 1.0E-83 T 13-09-2016 PMA3_RS29725 e717d0685adcdf038bc9dc07143365a9 299 PIRSF PIRSF016020 3 298 1.1E-50 T 13-09-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 PMA3_RS29725 e717d0685adcdf038bc9dc07143365a9 299 Pfam PF01263 Aldose 1-epimerase 16 294 4.3E-49 T 13-09-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PMA3_RS29725 e717d0685adcdf038bc9dc07143365a9 299 SUPERFAMILY SSF74650 3 294 1.7E-73 T 13-09-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PMA3_RS29725 e717d0685adcdf038bc9dc07143365a9 299 PANTHER PTHR11122 10 299 1.0E-83 T 13-09-2016 PMA3_RS29650 9e11e42d5f71c5977052a90004ab1a8d 187 Pfam PF04345 Chorismate lyase 11 180 8.7E-53 T 13-09-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 PMA3_RS29650 9e11e42d5f71c5977052a90004ab1a8d 187 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 11 179 25.211 T 13-09-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 PMA3_RS29650 9e11e42d5f71c5977052a90004ab1a8d 187 PANTHER PTHR38683 12 185 2.6E-47 T 13-09-2016 PMA3_RS29650 9e11e42d5f71c5977052a90004ab1a8d 187 SUPERFAMILY SSF64288 13 178 3.18E-49 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS29650 9e11e42d5f71c5977052a90004ab1a8d 187 Gene3D G3DSA:3.40.1410.10 13 177 6.5E-52 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 SUPERFAMILY SSF51905 6 172 4.28E-62 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 SUPERFAMILY SSF51905 273 372 4.28E-62 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 Pfam PF01494 FAD binding domain 6 347 1.6E-25 T 13-09-2016 IPR002938 FAD-binding domain GO:0071949 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 PANTHER PTHR13789 6 377 2.1E-89 T 13-09-2016 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 Gene3D G3DSA:3.50.50.60 273 356 2.8E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 Gene3D G3DSA:3.50.50.60 4 178 2.8E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 PANTHER PTHR13789:SF186 6 377 2.1E-89 T 13-09-2016 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 SUPERFAMILY SSF54373 177 277 1.71E-6 T 13-09-2016 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 2.1E-20 T 13-09-2016 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.1E-20 T 13-09-2016 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 2.1E-20 T 13-09-2016 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 2.1E-20 T 13-09-2016 PMA3_RS12575 0e661fe4a2bbcf3c3dbf6cfe2d4fad2a 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 336 352 2.1E-20 T 13-09-2016 PMA3_RS04310 f2d92991467289304d7832284a681973 311 PANTHER PTHR11260:SF192 153 217 8.8E-65 T 13-09-2016 PMA3_RS04310 f2d92991467289304d7832284a681973 311 PANTHER PTHR11260:SF192 1 131 8.8E-65 T 13-09-2016 PMA3_RS04310 f2d92991467289304d7832284a681973 311 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 77 3.8E-13 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS04310 f2d92991467289304d7832284a681973 311 PANTHER PTHR11260 153 217 8.8E-65 T 13-09-2016 PMA3_RS04310 f2d92991467289304d7832284a681973 311 PANTHER PTHR11260 1 131 8.8E-65 T 13-09-2016 PMA3_RS04310 f2d92991467289304d7832284a681973 311 SUPERFAMILY SSF52833 4 91 1.08E-15 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS04310 f2d92991467289304d7832284a681973 311 Gene3D G3DSA:3.40.30.10 2 97 1.1E-9 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS04310 f2d92991467289304d7832284a681973 311 Gene3D G3DSA:1.20.1050.10 98 217 3.8E-10 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS04310 f2d92991467289304d7832284a681973 311 Pfam PF13410 Glutathione S-transferase, C-terminal domain 150 214 2.5E-9 T 13-09-2016 PMA3_RS04310 f2d92991467289304d7832284a681973 311 SUPERFAMILY SSF47616 141 217 9.24E-14 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS27915 b0ccf850b7797bbf1d61095d689a03a8 183 SUPERFAMILY SSF56399 146 177 1.15E-5 T 13-09-2016 PMA3_RS27915 b0ccf850b7797bbf1d61095d689a03a8 183 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 105 183 1.2E-20 T 13-09-2016 IPR022385 Rhs repeat-associated core GO:0097264 PMA3_RS00120 f73129ce2a237bd250a7af3803b52def 508 Pfam PF00916 Sulfate permease family 13 378 1.6E-60 T 13-09-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PMA3_RS00120 f73129ce2a237bd250a7af3803b52def 508 PANTHER PTHR11814 1 485 1.2E-196 T 13-09-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PMA3_RS00120 f73129ce2a237bd250a7af3803b52def 508 PANTHER PTHR11814:SF123 1 485 1.2E-196 T 13-09-2016 PMA3_RS11655 c7af4288da3c72353b7801a7750fa76d 380 Gene3D G3DSA:2.40.110.10 131 218 4.9E-16 T 13-09-2016 PMA3_RS11655 c7af4288da3c72353b7801a7750fa76d 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 373 1.6E-29 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11655 c7af4288da3c72353b7801a7750fa76d 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 215 3.3E-10 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS11655 c7af4288da3c72353b7801a7750fa76d 380 Gene3D G3DSA:1.10.540.10 1 121 6.8E-18 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11655 c7af4288da3c72353b7801a7750fa76d 380 SUPERFAMILY SSF47203 229 376 1.34E-36 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11655 c7af4288da3c72353b7801a7750fa76d 380 PANTHER PTHR10909 1 363 4.9E-72 T 13-09-2016 PMA3_RS11655 c7af4288da3c72353b7801a7750fa76d 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 120 5.3E-14 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11655 c7af4288da3c72353b7801a7750fa76d 380 SUPERFAMILY SSF56645 1 234 1.96E-42 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS11655 c7af4288da3c72353b7801a7750fa76d 380 PANTHER PTHR10909:SF145 1 363 4.9E-72 T 13-09-2016 PMA3_RS11655 c7af4288da3c72353b7801a7750fa76d 380 Gene3D G3DSA:1.20.140.10 219 369 5.6E-36 T 13-09-2016 PMA3_RS25715 1db626bd0fd77123212219f7ee3b331f 425 Pfam PF14281 PD-(D/E)XK nuclease superfamily 34 207 2.8E-20 T 13-09-2016 IPR029470 PD-(D/E)XK nuclease superfamily 4 PMA3_RS30355 2bad4b792227e845abbceb442ec0b486 96 PANTHER PTHR40942 1 95 5.3E-50 T 13-09-2016 PMA3_RS30355 2bad4b792227e845abbceb442ec0b486 96 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 19 94 8.6E-15 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS30355 2bad4b792227e845abbceb442ec0b486 96 PANTHER PTHR40942:SF2 1 95 5.3E-50 T 13-09-2016 PMA3_RS30355 2bad4b792227e845abbceb442ec0b486 96 PRINTS PR00607 Class IE cytochrome C signature 84 95 8.6E-7 T 13-09-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PMA3_RS30355 2bad4b792227e845abbceb442ec0b486 96 PRINTS PR00607 Class IE cytochrome C signature 30 41 8.6E-7 T 13-09-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PMA3_RS30355 2bad4b792227e845abbceb442ec0b486 96 PRINTS PR00607 Class IE cytochrome C signature 41 51 8.6E-7 T 13-09-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PMA3_RS30355 2bad4b792227e845abbceb442ec0b486 96 PRINTS PR00607 Class IE cytochrome C signature 69 81 8.6E-7 T 13-09-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PMA3_RS30355 2bad4b792227e845abbceb442ec0b486 96 Gene3D G3DSA:1.10.760.10 20 95 1.9E-28 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS30355 2bad4b792227e845abbceb442ec0b486 96 SUPERFAMILY SSF46626 21 95 2.48E-16 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS13035 f68c2d1beb485af818bbb6706841cef1 112 SUPERFAMILY SSF54534 3 107 1.45E-39 T 13-09-2016 PMA3_RS13035 f68c2d1beb485af818bbb6706841cef1 112 PANTHER PTHR10516 5 112 2.9E-49 T 13-09-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PMA3_RS13035 f68c2d1beb485af818bbb6706841cef1 112 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 17 105 1.7E-32 T 13-09-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PMA3_RS13035 f68c2d1beb485af818bbb6706841cef1 112 Gene3D G3DSA:3.10.50.40 3 107 7.2E-43 T 13-09-2016 PMA3_RS12995 2c4b8606bf43dab3d78c4cfe67da3503 224 Gene3D G3DSA:1.20.910.10 1 215 1.1E-19 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS12995 2c4b8606bf43dab3d78c4cfe67da3503 224 SUPERFAMILY SSF48613 1 214 1.28E-65 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS12995 2c4b8606bf43dab3d78c4cfe67da3503 224 Pfam PF14518 Iron-containing redox enzyme 38 206 1.6E-25 T 13-09-2016 IPR028201 PqqC-like protein PMA3_RS09520 443038af5d944628da9b2ecb3f63f7d9 253 Pfam PF06912 Protein of unknown function (DUF1275) 22 235 9.0E-36 T 13-09-2016 IPR010699 Protein of unknown function DUF1275 PMA3_RS09520 443038af5d944628da9b2ecb3f63f7d9 253 PANTHER PTHR37314 2 252 1.5E-16 T 13-09-2016 PMA3_RS05430 d96489e765355e8e45bb5c3ba77fb6d2 130 PANTHER PTHR33570 2 129 7.6E-64 T 13-09-2016 PMA3_RS05430 d96489e765355e8e45bb5c3ba77fb6d2 130 SUPERFAMILY SSF69118 5 127 2.88E-38 T 13-09-2016 IPR029032 AhpD-like PMA3_RS05430 d96489e765355e8e45bb5c3ba77fb6d2 130 Gene3D G3DSA:1.20.1290.10 4 127 7.7E-27 T 13-09-2016 IPR029032 AhpD-like PMA3_RS05430 d96489e765355e8e45bb5c3ba77fb6d2 130 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 3 124 1.3E-58 T 13-09-2016 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44|UniPathway: UPA00157 PMA3_RS05430 d96489e765355e8e45bb5c3ba77fb6d2 130 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 2.0E-23 T 13-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS05430 d96489e765355e8e45bb5c3ba77fb6d2 130 PANTHER PTHR33570:SF2 2 129 7.6E-64 T 13-09-2016 PMA3_RS02710 4172b3f230203d921aa27135b223d406 334 Gene3D G3DSA:3.40.50.300 113 316 1.2E-86 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02710 4172b3f230203d921aa27135b223d406 334 PANTHER PTHR30473 2 333 1.3E-176 T 13-09-2016 PMA3_RS02710 4172b3f230203d921aa27135b223d406 334 PANTHER PTHR30473:SF1 2 333 1.3E-176 T 13-09-2016 PMA3_RS02710 4172b3f230203d921aa27135b223d406 334 Pfam PF02562 PhoH-like protein 113 316 2.9E-93 T 13-09-2016 IPR003714 PhoH-like protein GO:0005524 PMA3_RS02710 4172b3f230203d921aa27135b223d406 334 SUPERFAMILY SSF52540 112 288 2.26E-38 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30220 35644eb83f108345aa772eaf2cf782bb 504 Gene3D G3DSA:3.40.720.10 2 365 1.3E-97 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS30220 35644eb83f108345aa772eaf2cf782bb 504 PANTHER PTHR10342 2 457 2.5E-129 T 13-09-2016 PMA3_RS30220 35644eb83f108345aa772eaf2cf782bb 504 Pfam PF12411 Choline sulfatase enzyme C terminal 445 497 6.2E-27 T 13-09-2016 IPR025863 Choline sulfatase enzyme C-terminal domain UniPathway: UPA00290 PMA3_RS30220 35644eb83f108345aa772eaf2cf782bb 504 PANTHER PTHR10342:SF207 2 457 2.5E-129 T 13-09-2016 PMA3_RS30220 35644eb83f108345aa772eaf2cf782bb 504 SUPERFAMILY SSF53649 2 209 1.89E-115 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS30220 35644eb83f108345aa772eaf2cf782bb 504 SUPERFAMILY SSF53649 251 475 1.89E-115 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS30220 35644eb83f108345aa772eaf2cf782bb 504 ProSitePatterns PS00149 Sulfatases signature 2. 92 102 - T 13-09-2016 IPR024607 Sulfatase, conserved site PMA3_RS30220 35644eb83f108345aa772eaf2cf782bb 504 Gene3D G3DSA:3.30.1120.10 367 444 3.4E-8 T 13-09-2016 PMA3_RS30220 35644eb83f108345aa772eaf2cf782bb 504 TIGRFAM TIGR03417 chol_sulfatase: choline-sulfatase 3 498 2.2E-258 T 13-09-2016 IPR017785 Choline-sulfatase UniPathway: UPA00290 PMA3_RS30220 35644eb83f108345aa772eaf2cf782bb 504 Pfam PF00884 Sulfatase 4 344 2.9E-54 T 13-09-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PMA3_RS21510 9cc9053a3fc51855d76e88ccfbb7c80c 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 205 229 6.1E-61 T 13-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21510 9cc9053a3fc51855d76e88ccfbb7c80c 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 122 142 6.1E-61 T 13-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21510 9cc9053a3fc51855d76e88ccfbb7c80c 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 63 83 6.1E-61 T 13-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21510 9cc9053a3fc51855d76e88ccfbb7c80c 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 101 121 6.1E-61 T 13-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21510 9cc9053a3fc51855d76e88ccfbb7c80c 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 46 63 6.1E-61 T 13-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21510 9cc9053a3fc51855d76e88ccfbb7c80c 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 157 183 6.1E-61 T 13-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21510 9cc9053a3fc51855d76e88ccfbb7c80c 251 PANTHER PTHR30071 3 225 1.3E-75 T 13-09-2016 PMA3_RS21510 9cc9053a3fc51855d76e88ccfbb7c80c 251 Pfam PF01578 Cytochrome C assembly protein 27 185 9.9E-27 T 13-09-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PMA3_RS21510 9cc9053a3fc51855d76e88ccfbb7c80c 251 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 46 229 1.1E-83 T 13-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PMA3_RS21510 9cc9053a3fc51855d76e88ccfbb7c80c 251 SUPERFAMILY SSF49842 177 222 1.44E-5 T 13-09-2016 IPR008983 Tumour necrosis factor-like domain GO:0005515 PMA3_RS23965 30397bd6f0a570014d9a4cd99ca6cccd 473 PANTHER PTHR11785 11 463 3.1E-269 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS23965 30397bd6f0a570014d9a4cd99ca6cccd 473 PANTHER PTHR11785:SF29 11 463 3.1E-269 T 13-09-2016 PMA3_RS23965 30397bd6f0a570014d9a4cd99ca6cccd 473 Pfam PF00324 Amino acid permease 26 454 1.1E-113 T 13-09-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PMA3_RS23965 30397bd6f0a570014d9a4cd99ca6cccd 473 PIRSF PIRSF006060 10 468 7.8E-71 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS23965 30397bd6f0a570014d9a4cd99ca6cccd 473 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 13-09-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 Pfam PF07702 UTRA domain 92 230 6.0E-36 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 2.0E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 PANTHER PTHR11751:SF333 121 143 1.4E-38 T 13-09-2016 PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 SMART SM00345 12 71 6.6E-18 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 SMART SM00866 92 231 8.1E-31 T 13-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 PANTHER PTHR11751 12 74 1.4E-38 T 13-09-2016 PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 SUPERFAMILY SSF64288 59 233 1.88E-40 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 PANTHER PTHR11751 121 143 1.4E-38 T 13-09-2016 PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 Gene3D G3DSA:1.10.10.10 5 66 1.8E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 4.1E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 4.1E-9 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 SUPERFAMILY SSF46785 6 88 2.47E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 Gene3D G3DSA:3.40.1410.10 67 233 6.1E-40 T 13-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PMA3_RS07055 6190f2512e9c9adbba3ba68990605411 237 PANTHER PTHR11751:SF333 12 74 1.4E-38 T 13-09-2016 PMA3_RS24680 2f6e48fe94dfc260819086402e92db0c 766 SUPERFAMILY SSF49373 374 441 1.15E-5 T 13-09-2016 IPR008964 Invasin/intimin cell-adhesion fragments PMA3_RS24680 2f6e48fe94dfc260819086402e92db0c 766 Gene3D G3DSA:2.60.40.920 375 442 2.8E-5 T 13-09-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain PMA3_RS06470 b1b20533081b091ff8967cf6655ac010 383 PANTHER PTHR30203 1 378 3.9E-77 T 13-09-2016 PMA3_RS06470 b1b20533081b091ff8967cf6655ac010 383 Gene3D G3DSA:1.20.1600.10 2 375 1.1E-65 T 13-09-2016 PMA3_RS06470 b1b20533081b091ff8967cf6655ac010 383 PANTHER PTHR30203:SF1 1 378 3.9E-77 T 13-09-2016 PMA3_RS06470 b1b20533081b091ff8967cf6655ac010 383 Pfam PF02321 Outer membrane efflux protein 209 374 2.3E-29 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS06470 b1b20533081b091ff8967cf6655ac010 383 Pfam PF02321 Outer membrane efflux protein 2 175 1.7E-24 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS06470 b1b20533081b091ff8967cf6655ac010 383 SUPERFAMILY SSF56954 2 374 1.07E-79 T 13-09-2016 PMA3_RS06860 10cc486fd21093d06f81c7aee4b3918c 396 PANTHER PTHR32481 8 361 4.6E-181 T 13-09-2016 PMA3_RS06860 10cc486fd21093d06f81c7aee4b3918c 396 Gene3D G3DSA:2.40.30.40 79 174 5.7E-25 T 13-09-2016 IPR023367 Peptidase M42, domain 2 PMA3_RS06860 10cc486fd21093d06f81c7aee4b3918c 396 TIGRFAM TIGR03106 trio_M42_hydro: hydrolase, peptidase M42 family 9 350 5.2E-177 T 13-09-2016 IPR017537 Peptidase M42, hydrolase PMA3_RS06860 10cc486fd21093d06f81c7aee4b3918c 396 Pfam PF05343 M42 glutamyl aminopeptidase 54 342 9.9E-73 T 13-09-2016 IPR008007 Peptidase M42 PMA3_RS06860 10cc486fd21093d06f81c7aee4b3918c 396 Gene3D G3DSA:3.40.630.10 175 349 7.9E-52 T 13-09-2016 PMA3_RS06860 10cc486fd21093d06f81c7aee4b3918c 396 Gene3D G3DSA:3.40.630.10 12 78 7.9E-52 T 13-09-2016 PMA3_RS06860 10cc486fd21093d06f81c7aee4b3918c 396 PANTHER PTHR32481:SF7 8 361 4.6E-181 T 13-09-2016 PMA3_RS06860 10cc486fd21093d06f81c7aee4b3918c 396 SUPERFAMILY SSF101821 79 191 4.43E-25 T 13-09-2016 PMA3_RS06860 10cc486fd21093d06f81c7aee4b3918c 396 SUPERFAMILY SSF53187 186 348 4.94E-47 T 13-09-2016 PMA3_RS06860 10cc486fd21093d06f81c7aee4b3918c 396 SUPERFAMILY SSF53187 13 91 4.94E-47 T 13-09-2016 PMA3_RS02695 156b0d2e954d2c5b49812b452e1d690e 507 SUPERFAMILY SSF56317 224 485 1.83E-44 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS02695 156b0d2e954d2c5b49812b452e1d690e 507 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 1.2E-92 T 13-09-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 PMA3_RS02695 156b0d2e954d2c5b49812b452e1d690e 507 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 22.516 T 13-09-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 PMA3_RS02695 156b0d2e954d2c5b49812b452e1d690e 507 Pfam PF00795 Carbon-nitrogen hydrolase 229 469 3.7E-28 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS02695 156b0d2e954d2c5b49812b452e1d690e 507 Gene3D G3DSA:3.60.110.10 221 471 4.2E-26 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS02695 156b0d2e954d2c5b49812b452e1d690e 507 PANTHER PTHR38686 1 506 1.5E-102 T 13-09-2016 PMA3_RS24085 1f0cbd545eca70950bd35484949653bf 247 PIRSF PIRSF006325 2 247 1.8E-108 T 13-09-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 PMA3_RS24085 1f0cbd545eca70950bd35484949653bf 247 SUPERFAMILY SSF53335 21 245 1.17E-33 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS24085 1f0cbd545eca70950bd35484949653bf 247 Pfam PF13649 Methyltransferase domain 63 163 3.6E-11 T 13-09-2016 PMA3_RS24085 1f0cbd545eca70950bd35484949653bf 247 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 4 247 39.859 T 13-09-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 PMA3_RS24085 1f0cbd545eca70950bd35484949653bf 247 Gene3D G3DSA:3.40.50.150 21 245 3.6E-54 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS24085 1f0cbd545eca70950bd35484949653bf 247 PANTHER PTHR10108:SF809 6 246 4.2E-90 T 13-09-2016 PMA3_RS24085 1f0cbd545eca70950bd35484949653bf 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 6 246 1.1E-87 T 13-09-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 PMA3_RS24085 1f0cbd545eca70950bd35484949653bf 247 PANTHER PTHR10108 6 246 4.2E-90 T 13-09-2016 PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 Pfam PF08238 Sel1 repeat 200 215 16.0 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 Pfam PF08238 Sel1 repeat 78 110 1.1 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 Pfam PF08238 Sel1 repeat 41 75 5.0E-6 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 Pfam PF08238 Sel1 repeat 148 183 7.8E-5 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 Pfam PF08238 Sel1 repeat 114 147 5.2E-5 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 SUPERFAMILY SSF81901 23 219 1.31E-39 T 13-09-2016 PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 Gene3D G3DSA:1.25.40.10 21 217 3.5E-42 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 SMART SM00671 76 111 0.022 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 SMART SM00671 40 75 3.5E-7 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 SMART SM00671 114 147 9.3E-4 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 SMART SM00671 184 215 360.0 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 SMART SM00671 148 183 1.6E-4 T 13-09-2016 IPR006597 Sel1-like repeat PMA3_RS25390 2dbff9b763cf9506716ca29a55b8a802 253 PANTHER PTHR11102 25 220 5.3E-36 T 13-09-2016 PMA3_RS25040 70664b900cc9ccca50e2921180c44b98 211 SUPERFAMILY SSF53850 1 205 3.69E-64 T 13-09-2016 PMA3_RS25040 70664b900cc9ccca50e2921180c44b98 211 PANTHER PTHR21403 1 210 6.8E-96 T 13-09-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PMA3_RS25040 70664b900cc9ccca50e2921180c44b98 211 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 182 1.4E-53 T 13-09-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PMA3_RS25040 70664b900cc9ccca50e2921180c44b98 211 Gene3D G3DSA:3.40.190.10 112 173 2.9E-28 T 13-09-2016 PMA3_RS25040 70664b900cc9ccca50e2921180c44b98 211 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 13-09-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PMA3_RS25040 70664b900cc9ccca50e2921180c44b98 211 Pfam PF01634 ATP phosphoribosyltransferase 51 202 2.6E-46 T 13-09-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PMA3_RS25040 70664b900cc9ccca50e2921180c44b98 211 PANTHER PTHR21403:SF3 1 210 6.8E-96 T 13-09-2016 PMA3_RS25040 70664b900cc9ccca50e2921180c44b98 211 Gene3D G3DSA:3.40.190.10 1 111 1.9E-33 T 13-09-2016 PMA3_RS25040 70664b900cc9ccca50e2921180c44b98 211 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 206 56.912 T 13-09-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PMA3_RS08945 e2f840205cb8f2590bcfd5f225822468 277 PANTHER PTHR10992:SF107 23 268 4.0E-25 T 13-09-2016 PMA3_RS08945 e2f840205cb8f2590bcfd5f225822468 277 Gene3D G3DSA:3.40.50.1820 52 254 1.5E-30 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS08945 e2f840205cb8f2590bcfd5f225822468 277 Pfam PF12697 Alpha/beta hydrolase family 69 185 2.2E-12 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS08945 e2f840205cb8f2590bcfd5f225822468 277 PANTHER PTHR10992 23 268 4.0E-25 T 13-09-2016 PMA3_RS08945 e2f840205cb8f2590bcfd5f225822468 277 SUPERFAMILY SSF53474 58 257 1.54E-31 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS07870 ccb4ce1d87ffce4018f8a7418d9163b1 196 PANTHER PTHR11080 1 196 6.6E-54 T 13-09-2016 PMA3_RS07870 ccb4ce1d87ffce4018f8a7418d9163b1 196 Gene3D G3DSA:3.40.50.850 11 196 8.4E-48 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS07870 ccb4ce1d87ffce4018f8a7418d9163b1 196 PANTHER PTHR11080:SF17 1 196 6.6E-54 T 13-09-2016 PMA3_RS07870 ccb4ce1d87ffce4018f8a7418d9163b1 196 SUPERFAMILY SSF52499 3 195 1.11E-45 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS07870 ccb4ce1d87ffce4018f8a7418d9163b1 196 Pfam PF00857 Isochorismatase family 24 190 2.6E-33 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS15980 bb6f9c91cbf347cb5f8eb228d80fd098 226 PANTHER PTHR16557 7 24 5.9E-48 T 13-09-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 PMA3_RS15980 bb6f9c91cbf347cb5f8eb228d80fd098 226 PANTHER PTHR16557 51 223 5.9E-48 T 13-09-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 PMA3_RS15980 bb6f9c91cbf347cb5f8eb228d80fd098 226 SUPERFAMILY SSF51197 32 224 2.47E-57 T 13-09-2016 PMA3_RS15980 bb6f9c91cbf347cb5f8eb228d80fd098 226 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 50 223 2.2E-51 T 13-09-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PMA3_RS15980 bb6f9c91cbf347cb5f8eb228d80fd098 226 Gene3D G3DSA:2.60.120.590 46 225 6.6E-53 T 13-09-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PMA3_RS10675 ede3f9e5145b431ef462b1d4506255eb 522 Pfam PF07819 PGAP1-like protein 124 213 4.7E-8 T 13-09-2016 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 PMA3_RS10675 ede3f9e5145b431ef462b1d4506255eb 522 SUPERFAMILY SSF53474 133 212 3.77E-6 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS10675 ede3f9e5145b431ef462b1d4506255eb 522 SUPERFAMILY SSF53474 251 347 3.77E-6 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS10675 ede3f9e5145b431ef462b1d4506255eb 522 SUPERFAMILY SSF53474 125 209 4.6E-10 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS10675 ede3f9e5145b431ef462b1d4506255eb 522 Gene3D G3DSA:3.40.50.1820 10 20 1.6E-16 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS10675 ede3f9e5145b431ef462b1d4506255eb 522 Gene3D G3DSA:3.40.50.1820 275 314 1.6E-16 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS10675 ede3f9e5145b431ef462b1d4506255eb 522 Gene3D G3DSA:3.40.50.1820 105 215 1.6E-16 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS11950 3ae3c8682fa2210a9929d08ae062adf3 582 PANTHER PTHR30047 8 536 1.7E-218 T 13-09-2016 PMA3_RS11950 3ae3c8682fa2210a9929d08ae062adf3 582 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 37 531 3.2E-174 T 13-09-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PMA3_RS11950 3ae3c8682fa2210a9929d08ae062adf3 582 ProSitePatterns PS01303 BCCT family of transporters signature. 343 352 - T 13-09-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 PMA3_RS11950 3ae3c8682fa2210a9929d08ae062adf3 582 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 75 531 3.1E-160 T 13-09-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PMA3_RS11950 3ae3c8682fa2210a9929d08ae062adf3 582 PANTHER PTHR30047:SF2 8 536 1.7E-218 T 13-09-2016 PMA3_RS03980 2f70b02ee042290f349c90fc98ab6b05 144 Pfam PF06295 Protein of unknown function (DUF1043) 14 129 1.1E-23 T 13-09-2016 IPR009386 Protein of unknown function DUF1043 PMA3_RS03980 2f70b02ee042290f349c90fc98ab6b05 144 PIRSF PIRSF006318 2 144 2.2E-38 T 13-09-2016 IPR009386 Protein of unknown function DUF1043 PMA3_RS03980 2f70b02ee042290f349c90fc98ab6b05 144 PANTHER PTHR39579 2 143 2.6E-41 T 13-09-2016 PMA3_RS29655 db2aa75101314823d7001df30cc805cf 296 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 18 293 6.3E-102 T 13-09-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 PMA3_RS29655 db2aa75101314823d7001df30cc805cf 296 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 11 294 29.309 T 13-09-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 PMA3_RS29655 db2aa75101314823d7001df30cc805cf 296 Pfam PF01040 UbiA prenyltransferase family 34 278 4.6E-66 T 13-09-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PMA3_RS29655 db2aa75101314823d7001df30cc805cf 296 PANTHER PTHR11048 3 293 1.1E-90 T 13-09-2016 PMA3_RS29655 db2aa75101314823d7001df30cc805cf 296 PANTHER PTHR11048:SF7 3 293 1.1E-90 T 13-09-2016 PMA3_RS23275 21147b6df7f256b9cfafcffdf0744f69 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 6.1E-100 T 13-09-2016 IPR002876 Transcriptional regulator TACO1-like PMA3_RS23275 21147b6df7f256b9cfafcffdf0744f69 248 PANTHER PTHR12532:SF0 1 241 6.9E-118 T 13-09-2016 PMA3_RS23275 21147b6df7f256b9cfafcffdf0744f69 248 SUPERFAMILY SSF75625 3 246 3.79E-97 T 13-09-2016 IPR029072 YebC-like PMA3_RS23275 21147b6df7f256b9cfafcffdf0744f69 248 Gene3D G3DSA:3.30.1270.10 83 134 1.4E-42 T 13-09-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 PMA3_RS23275 21147b6df7f256b9cfafcffdf0744f69 248 Gene3D G3DSA:3.30.1270.10 212 247 1.4E-42 T 13-09-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 PMA3_RS23275 21147b6df7f256b9cfafcffdf0744f69 248 PANTHER PTHR12532 1 241 6.9E-118 T 13-09-2016 IPR002876 Transcriptional regulator TACO1-like PMA3_RS23275 21147b6df7f256b9cfafcffdf0744f69 248 Gene3D G3DSA:1.10.10.200 1 79 2.0E-34 T 13-09-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like PMA3_RS23275 21147b6df7f256b9cfafcffdf0744f69 248 Gene3D G3DSA:3.30.70.980 135 205 1.4E-27 T 13-09-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 PMA3_RS23275 21147b6df7f256b9cfafcffdf0744f69 248 Pfam PF01709 Transcriptional regulator 5 237 1.6E-92 T 13-09-2016 IPR002876 Transcriptional regulator TACO1-like PMA3_RS23275 21147b6df7f256b9cfafcffdf0744f69 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.655 T 13-09-2016 IPR002876 Transcriptional regulator TACO1-like PMA3_RS01060 c20f2d0168e6fa613f24986d33c532a9 90 SUPERFAMILY SSF111148 1 89 1.1E-37 T 13-09-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PMA3_RS01060 c20f2d0168e6fa613f24986d33c532a9 90 PANTHER PTHR36965:SF1 2 90 3.1E-45 T 13-09-2016 PMA3_RS01060 c20f2d0168e6fa613f24986d33c532a9 90 PANTHER PTHR36965 2 90 3.1E-45 T 13-09-2016 PMA3_RS01060 c20f2d0168e6fa613f24986d33c532a9 90 Gene3D G3DSA:1.10.3880.10 1 89 3.6E-38 T 13-09-2016 PMA3_RS01060 c20f2d0168e6fa613f24986d33c532a9 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 25.664 T 13-09-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PMA3_RS01060 c20f2d0168e6fa613f24986d33c532a9 90 PIRSF PIRSF029827 1 90 1.7E-37 T 13-09-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PMA3_RS01060 c20f2d0168e6fa613f24986d33c532a9 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 73 5.0E-36 T 13-09-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PMA3_RS01060 c20f2d0168e6fa613f24986d33c532a9 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.5E-38 T 13-09-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PMA3_RS21695 93f08bce190e348e3672444ad7f579fc 122 Pfam PF01627 Hpt domain 24 92 1.1E-13 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS21695 93f08bce190e348e3672444ad7f579fc 122 Gene3D G3DSA:1.20.120.160 4 107 1.4E-26 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS21695 93f08bce190e348e3672444ad7f579fc 122 SMART SM00073 14 105 2.3E-5 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS21695 93f08bce190e348e3672444ad7f579fc 122 SUPERFAMILY SSF47226 3 110 1.83E-27 T 13-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PMA3_RS13545 766ce6089a46a363504ea442942be15b 277 SUPERFAMILY SSF53448 12 220 2.46E-22 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS13545 766ce6089a46a363504ea442942be15b 277 Pfam PF00535 Glycosyl transferase family 2 15 146 6.4E-8 T 13-09-2016 IPR001173 Glycosyltransferase 2-like PMA3_RS13545 766ce6089a46a363504ea442942be15b 277 Gene3D G3DSA:3.90.550.10 14 188 4.5E-13 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS04670 19ae0bbf53a7128246c5142d3a61a3a2 224 SUPERFAMILY SSF53067 110 213 4.53E-24 T 13-09-2016 PMA3_RS04670 19ae0bbf53a7128246c5142d3a61a3a2 224 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 215 1.6E-64 T 13-09-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 PMA3_RS04670 19ae0bbf53a7128246c5142d3a61a3a2 224 PANTHER PTHR11735:SF11 1 137 1.9E-55 T 13-09-2016 PMA3_RS04670 19ae0bbf53a7128246c5142d3a61a3a2 224 Gene3D G3DSA:3.30.420.40 4 132 1.6E-42 T 13-09-2016 PMA3_RS04670 19ae0bbf53a7128246c5142d3a61a3a2 224 Pfam PF00814 Glycoprotease family 31 149 1.3E-28 T 13-09-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PMA3_RS04670 19ae0bbf53a7128246c5142d3a61a3a2 224 SUPERFAMILY SSF53067 4 107 1.94E-29 T 13-09-2016 PMA3_RS04670 19ae0bbf53a7128246c5142d3a61a3a2 224 PANTHER PTHR11735 1 137 1.9E-55 T 13-09-2016 PMA3_RS01535 d6bdfd39ebd76e4ba33da9133f58a0fd 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 49.895 T 13-09-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS01535 d6bdfd39ebd76e4ba33da9133f58a0fd 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 6.2E-140 T 13-09-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS01535 d6bdfd39ebd76e4ba33da9133f58a0fd 355 Gene3D G3DSA:3.20.20.210 3 353 9.9E-156 T 13-09-2016 PMA3_RS01535 d6bdfd39ebd76e4ba33da9133f58a0fd 355 PANTHER PTHR21091:SF2 1 352 4.6E-155 T 13-09-2016 PMA3_RS01535 d6bdfd39ebd76e4ba33da9133f58a0fd 355 PANTHER PTHR21091 1 352 4.6E-155 T 13-09-2016 PMA3_RS01535 d6bdfd39ebd76e4ba33da9133f58a0fd 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 13-09-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS01535 d6bdfd39ebd76e4ba33da9133f58a0fd 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 13-09-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS01535 d6bdfd39ebd76e4ba33da9133f58a0fd 355 SUPERFAMILY SSF51726 1 354 1.15E-122 T 13-09-2016 PMA3_RS01535 d6bdfd39ebd76e4ba33da9133f58a0fd 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 7.6E-135 T 13-09-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PMA3_RS23500 1bd006eb29ed8fdf08aaee3c452a6722 117 SUPERFAMILY SSF54909 6 99 9.08E-19 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS23500 1bd006eb29ed8fdf08aaee3c452a6722 117 Gene3D G3DSA:3.30.70.900 7 96 4.5E-18 T 13-09-2016 PMA3_RS23500 1bd006eb29ed8fdf08aaee3c452a6722 117 Pfam PF03992 Antibiotic biosynthesis monooxygenase 7 77 2.4E-12 T 13-09-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PMA3_RS16155 9a86b7593241bfc3a939dadd1ffa94b3 55 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 13 45 9.4E-10 T 13-09-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PMA3_RS21340 ffd40988609783afb4b169466fa2631d 152 Pfam PF01797 Transposase IS200 like 21 130 1.3E-11 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS21340 ffd40988609783afb4b169466fa2631d 152 Gene3D G3DSA:3.30.70.1290 7 133 3.2E-14 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS21340 ffd40988609783afb4b169466fa2631d 152 SMART SM01321 17 131 1.8E-31 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS21340 ffd40988609783afb4b169466fa2631d 152 PANTHER PTHR36966:SF1 5 152 8.5E-25 T 13-09-2016 PMA3_RS21340 ffd40988609783afb4b169466fa2631d 152 PANTHER PTHR36966 5 152 8.5E-25 T 13-09-2016 PMA3_RS21340 ffd40988609783afb4b169466fa2631d 152 SUPERFAMILY SSF143422 10 137 1.96E-26 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS04115 93846a0f07782f0a583bf7ca2fcf84e5 580 PANTHER PTHR30627:SF1 1 567 1.4E-208 T 13-09-2016 PMA3_RS04115 93846a0f07782f0a583bf7ca2fcf84e5 580 Pfam PF00905 Penicillin binding protein transpeptidase domain 245 545 6.7E-76 T 13-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PMA3_RS04115 93846a0f07782f0a583bf7ca2fcf84e5 580 SUPERFAMILY SSF56601 171 577 3.42E-88 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS04115 93846a0f07782f0a583bf7ca2fcf84e5 580 Gene3D G3DSA:3.40.710.10 227 551 9.6E-86 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS04115 93846a0f07782f0a583bf7ca2fcf84e5 580 SUPERFAMILY SSF56519 52 219 5.62E-44 T 13-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PMA3_RS04115 93846a0f07782f0a583bf7ca2fcf84e5 580 Gene3D G3DSA:3.90.1310.10 127 226 4.1E-28 T 13-09-2016 PMA3_RS04115 93846a0f07782f0a583bf7ca2fcf84e5 580 PANTHER PTHR30627 1 567 1.4E-208 T 13-09-2016 PMA3_RS04115 93846a0f07782f0a583bf7ca2fcf84e5 580 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 205 4.5E-17 T 13-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PMA3_RS23590 112d478fa4abc5712df96437fcb167a1 200 Pfam PF01810 LysE type translocator 15 199 3.7E-47 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS23590 112d478fa4abc5712df96437fcb167a1 200 PANTHER PTHR30086 1 197 4.3E-84 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS23590 112d478fa4abc5712df96437fcb167a1 200 PANTHER PTHR30086:SF0 1 197 4.3E-84 T 13-09-2016 PMA3_RS00570 c27ccd2ab56e2a742ec3a20cbb43e81d 337 PANTHER PTHR30368:SF2 1 337 6.2E-176 T 13-09-2016 PMA3_RS00570 c27ccd2ab56e2a742ec3a20cbb43e81d 337 Pfam PF13531 Bacterial extracellular solute-binding protein 52 287 7.9E-42 T 13-09-2016 PMA3_RS00570 c27ccd2ab56e2a742ec3a20cbb43e81d 337 PANTHER PTHR30368 1 337 6.2E-176 T 13-09-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 PMA3_RS00570 c27ccd2ab56e2a742ec3a20cbb43e81d 337 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 13-09-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 PMA3_RS00570 c27ccd2ab56e2a742ec3a20cbb43e81d 337 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 18 333 1.9E-139 T 13-09-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 PMA3_RS00570 c27ccd2ab56e2a742ec3a20cbb43e81d 337 Gene3D G3DSA:3.40.190.10 120 284 7.7E-75 T 13-09-2016 PMA3_RS00570 c27ccd2ab56e2a742ec3a20cbb43e81d 337 SUPERFAMILY SSF53850 27 335 1.8E-85 T 13-09-2016 PMA3_RS14135 8f0b0b4256d71d72ecaae7e9917b6078 133 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 100 7.0E-9 T 13-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS14135 8f0b0b4256d71d72ecaae7e9917b6078 133 SUPERFAMILY SSF69118 19 121 4.06E-22 T 13-09-2016 IPR029032 AhpD-like PMA3_RS14135 8f0b0b4256d71d72ecaae7e9917b6078 133 Gene3D G3DSA:1.20.1290.10 6 123 1.1E-40 T 13-09-2016 IPR029032 AhpD-like PMA3_RS03670 9f4442a200de276acc5d83039df16650 150 Pfam PF13673 Acetyltransferase (GNAT) domain 40 128 1.1E-12 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS03670 9f4442a200de276acc5d83039df16650 150 PANTHER PTHR23091:SF247 1 148 1.4E-33 T 13-09-2016 PMA3_RS03670 9f4442a200de276acc5d83039df16650 150 Gene3D G3DSA:3.40.630.30 5 148 1.4E-32 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS03670 9f4442a200de276acc5d83039df16650 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 144 5.0E-43 T 13-09-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 PMA3_RS03670 9f4442a200de276acc5d83039df16650 150 SUPERFAMILY SSF55729 5 148 5.74E-32 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS03670 9f4442a200de276acc5d83039df16650 150 PANTHER PTHR23091 1 148 1.4E-33 T 13-09-2016 PMA3_RS29090 5f395e91360c2b8722c3a18f2a14a357 222 Pfam PF04752 ChaC-like protein 44 206 1.3E-37 T 13-09-2016 IPR006840 ChaC-like protein PMA3_RS29090 5f395e91360c2b8722c3a18f2a14a357 222 SUPERFAMILY SSF110857 44 157 4.45E-8 T 13-09-2016 IPR013024 Butirosin biosynthesis, BtrG-like PMA3_RS29090 5f395e91360c2b8722c3a18f2a14a357 222 PANTHER PTHR12192 26 204 3.8E-44 T 13-09-2016 IPR006840 ChaC-like protein PMA3_RS29090 5f395e91360c2b8722c3a18f2a14a357 222 PANTHER PTHR12192:SF9 26 204 3.8E-44 T 13-09-2016 PMA3_RS29090 5f395e91360c2b8722c3a18f2a14a357 222 Gene3D G3DSA:3.10.490.10 39 204 7.4E-25 T 13-09-2016 IPR013024 Butirosin biosynthesis, BtrG-like PMA3_RS20420 96f85b1d75636cdeac95e5e008d0442c 105 Gene3D G3DSA:2.102.10.10 1 103 1.0E-27 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS20420 96f85b1d75636cdeac95e5e008d0442c 105 SUPERFAMILY SSF50022 1 103 4.58E-32 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS20420 96f85b1d75636cdeac95e5e008d0442c 105 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 100 6.4E-32 T 13-09-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PMA3_RS20420 96f85b1d75636cdeac95e5e008d0442c 105 PANTHER PTHR21496 1 97 6.6E-21 T 13-09-2016 PMA3_RS20420 96f85b1d75636cdeac95e5e008d0442c 105 Pfam PF00355 Rieske [2Fe-2S] domain 2 78 1.9E-14 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS08395 f8c44f1ccb3ea2ff60801e0b563a5166 1121 PANTHER PTHR36153:SF1 12 1107 2.9E-150 T 13-09-2016 PMA3_RS08395 f8c44f1ccb3ea2ff60801e0b563a5166 1121 Pfam PF06744 Type VI secretion protein IcmF C-terminal 852 1049 1.7E-50 T 13-09-2016 IPR010623 Type VI secretion system IcmF, C-terminal PMA3_RS08395 f8c44f1ccb3ea2ff60801e0b563a5166 1121 Pfam PF06761 Intracellular multiplication and human macrophage-killing 406 721 3.1E-73 T 13-09-2016 IPR009612 ImcF-related PMA3_RS08395 f8c44f1ccb3ea2ff60801e0b563a5166 1121 PANTHER PTHR36153 12 1107 2.9E-150 T 13-09-2016 PMA3_RS05865 75207b16ed5b86d02e01d885be7d287b 408 Gene3D G3DSA:3.30.1540.10 234 301 1.4E-4 T 13-09-2016 PMA3_RS05865 75207b16ed5b86d02e01d885be7d287b 408 Gene3D G3DSA:3.40.50.10540 302 389 1.2E-107 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS05865 75207b16ed5b86d02e01d885be7d287b 408 Gene3D G3DSA:3.40.50.10540 3 216 1.2E-107 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS05865 75207b16ed5b86d02e01d885be7d287b 408 PANTHER PTHR24023:SF577 60 380 3.2E-57 T 13-09-2016 PMA3_RS05865 75207b16ed5b86d02e01d885be7d287b 408 Pfam PF02515 CoA-transferase family III 5 369 1.7E-97 T 13-09-2016 IPR003673 CoA-transferase family III GO:0003824 PMA3_RS05865 75207b16ed5b86d02e01d885be7d287b 408 SUPERFAMILY SSF89796 3 389 2.62E-122 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS05865 75207b16ed5b86d02e01d885be7d287b 408 PANTHER PTHR24023 60 380 3.2E-57 T 13-09-2016 PMA3_RS06495 3cdb0d42e39b5673dd2e293340021ee9 441 Gene3D G3DSA:2.40.160.10 35 441 8.7E-139 T 13-09-2016 IPR023614 Porin domain PMA3_RS06495 3cdb0d42e39b5673dd2e293340021ee9 441 PANTHER PTHR34596 1 441 1.9E-152 T 13-09-2016 PMA3_RS06495 3cdb0d42e39b5673dd2e293340021ee9 441 SUPERFAMILY SSF56925 205 292 9.68E-7 T 13-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PMA3_RS06495 3cdb0d42e39b5673dd2e293340021ee9 441 Pfam PF03573 outer membrane porin, OprD family 31 440 8.9E-149 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS16535 b21532430351a3927c576b43b7c9678a 294 PANTHER PTHR30222:SF1 10 275 1.2E-82 T 13-09-2016 PMA3_RS16535 b21532430351a3927c576b43b7c9678a 294 Gene3D G3DSA:1.10.3720.10 1 264 2.4E-55 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS16535 b21532430351a3927c576b43b7c9678a 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 254 3.5E-13 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS16535 b21532430351a3927c576b43b7c9678a 294 PANTHER PTHR30222 10 275 1.2E-82 T 13-09-2016 PMA3_RS16535 b21532430351a3927c576b43b7c9678a 294 SUPERFAMILY SSF161098 5 262 4.58E-50 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS02590 21dce150374474f451aa2004abdee86b 355 PIRSF PIRSF029693 1 355 1.1E-211 T 13-09-2016 IPR016936 Uncharacterised conserved protein UCP029693 PMA3_RS02590 21dce150374474f451aa2004abdee86b 355 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 35 355 1.4E-159 T 13-09-2016 IPR016936 Uncharacterised conserved protein UCP029693 PMA3_RS03260 88bf1c043e3069495da9c07ee5966bb5 1040 Pfam PF05567 Neisseria PilC beta-propeller domain 549 877 1.3E-53 T 13-09-2016 IPR008707 PilC beta-propeller domain PMA3_RS03260 88bf1c043e3069495da9c07ee5966bb5 1040 SUPERFAMILY SSF50998 591 899 4.32E-5 T 13-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PMA3_RS26500 194e4b9caf2cb400f067db0196a6ec67 97 PANTHER PTHR33336:SF5 1 96 2.4E-20 T 13-09-2016 PMA3_RS26500 194e4b9caf2cb400f067db0196a6ec67 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 79 1.2E-16 T 13-09-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PMA3_RS26500 194e4b9caf2cb400f067db0196a6ec67 97 PANTHER PTHR33336 1 96 2.4E-20 T 13-09-2016 PMA3_RS26500 194e4b9caf2cb400f067db0196a6ec67 97 SUPERFAMILY SSF54909 1 95 5.78E-27 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS26500 194e4b9caf2cb400f067db0196a6ec67 97 Gene3D G3DSA:3.30.70.900 1 95 3.8E-30 T 13-09-2016 PMA3_RS20885 3ad3cc4d1ab0e86adcbac5da53d7ff10 425 PANTHER PTHR30250 1 411 2.7E-41 T 13-09-2016 PMA3_RS20885 3ad3cc4d1ab0e86adcbac5da53d7ff10 425 Pfam PF01943 Polysaccharide biosynthesis protein 9 283 3.8E-13 T 13-09-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 PMA3_RS20885 3ad3cc4d1ab0e86adcbac5da53d7ff10 425 PANTHER PTHR30250:SF9 1 411 2.7E-41 T 13-09-2016 PMA3_RS12170 825cf17e8bab9174cce2f87fd4739dfe 362 PANTHER PTHR10426:SF4 10 358 1.1E-100 T 13-09-2016 PMA3_RS12170 825cf17e8bab9174cce2f87fd4739dfe 362 Pfam PF03088 Strictosidine synthase 151 239 2.5E-21 T 13-09-2016 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 PMA3_RS12170 825cf17e8bab9174cce2f87fd4739dfe 362 Gene3D G3DSA:2.120.10.30 13 354 5.9E-51 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS12170 825cf17e8bab9174cce2f87fd4739dfe 362 PANTHER PTHR10426 10 358 1.1E-100 T 13-09-2016 IPR004141 Strictosidine synthase GO:0009058|GO:0016844 PMA3_RS12170 825cf17e8bab9174cce2f87fd4739dfe 362 SUPERFAMILY SSF63829 305 350 2.45E-45 T 13-09-2016 PMA3_RS12170 825cf17e8bab9174cce2f87fd4739dfe 362 SUPERFAMILY SSF63829 31 272 2.45E-45 T 13-09-2016 PMA3_RS13510 9ae726799fd5201bee9bb867a58b29f4 301 Gene3D G3DSA:3.40.190.10 37 120 9.9E-18 T 13-09-2016 PMA3_RS13510 9ae726799fd5201bee9bb867a58b29f4 301 Gene3D G3DSA:3.40.190.10 246 285 9.9E-18 T 13-09-2016 PMA3_RS13510 9ae726799fd5201bee9bb867a58b29f4 301 SMART SM00062 37 287 2.0E-20 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS13510 9ae726799fd5201bee9bb867a58b29f4 301 Gene3D G3DSA:3.40.190.10 121 244 3.6E-8 T 13-09-2016 PMA3_RS13510 9ae726799fd5201bee9bb867a58b29f4 301 SUPERFAMILY SSF53850 7 285 5.61E-44 T 13-09-2016 PMA3_RS13510 9ae726799fd5201bee9bb867a58b29f4 301 PANTHER PTHR30085 8 152 7.4E-27 T 13-09-2016 PMA3_RS13510 9ae726799fd5201bee9bb867a58b29f4 301 PANTHER PTHR30085 172 285 7.4E-27 T 13-09-2016 PMA3_RS13510 9ae726799fd5201bee9bb867a58b29f4 301 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 285 2.0E-34 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS13510 9ae726799fd5201bee9bb867a58b29f4 301 PANTHER PTHR30085:SF2 8 152 7.4E-27 T 13-09-2016 PMA3_RS13510 9ae726799fd5201bee9bb867a58b29f4 301 PANTHER PTHR30085:SF2 172 285 7.4E-27 T 13-09-2016 PMA3_RS06130 605efa3d698fd73227a022b843d7262b 207 Gene3D G3DSA:3.40.30.10 2 87 5.7E-24 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06130 605efa3d698fd73227a022b843d7262b 207 SUPERFAMILY SSF52833 1 85 3.37E-22 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06130 605efa3d698fd73227a022b843d7262b 207 PANTHER PTHR11260 1 203 4.3E-74 T 13-09-2016 PMA3_RS06130 605efa3d698fd73227a022b843d7262b 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 78 5.5E-14 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS06130 605efa3d698fd73227a022b843d7262b 207 SUPERFAMILY SSF47616 80 203 2.78E-30 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS06130 605efa3d698fd73227a022b843d7262b 207 Gene3D G3DSA:1.20.1050.10 88 204 3.8E-32 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS06130 605efa3d698fd73227a022b843d7262b 207 PANTHER PTHR11260:SF157 1 203 4.3E-74 T 13-09-2016 PMA3_RS06130 605efa3d698fd73227a022b843d7262b 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 123 196 1.2E-4 T 13-09-2016 IPR004046 Glutathione S-transferase, C-terminal PMA3_RS16670 510eef95aae7920e9da76730826aac33 133 PANTHER PTHR34309 1 133 5.6E-65 T 13-09-2016 PMA3_RS16670 510eef95aae7920e9da76730826aac33 133 SUPERFAMILY SSF143744 3 131 6.93E-36 T 13-09-2016 PMA3_RS16670 510eef95aae7920e9da76730826aac33 133 PANTHER PTHR34309:SF4 1 133 5.6E-65 T 13-09-2016 PMA3_RS16670 510eef95aae7920e9da76730826aac33 133 Pfam PF03928 Haem-degrading 8 129 3.8E-32 T 13-09-2016 IPR005624 Haem-degrading PMA3_RS29080 3ba63389cc2a7db78a2e71962e861839 204 PANTHER PTHR33446 23 118 1.7E-15 T 13-09-2016 PMA3_RS29080 3ba63389cc2a7db78a2e71962e861839 204 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 30 107 1.7E-13 T 13-09-2016 IPR006260 TonB, C-terminal GO:0006810 PMA3_RS29080 3ba63389cc2a7db78a2e71962e861839 204 Gene3D G3DSA:3.30.1150.10 29 91 5.3E-5 T 13-09-2016 PMA3_RS29080 3ba63389cc2a7db78a2e71962e861839 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 25 46 1.6E-5 T 13-09-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PMA3_RS29080 3ba63389cc2a7db78a2e71962e861839 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 46 64 1.6E-5 T 13-09-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PMA3_RS29080 3ba63389cc2a7db78a2e71962e861839 204 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 31 107 3.6E-10 T 13-09-2016 IPR006260 TonB, C-terminal GO:0006810 PMA3_RS29080 3ba63389cc2a7db78a2e71962e861839 204 SUPERFAMILY SSF74653 25 105 7.19E-15 T 13-09-2016 PMA3_RS23300 9b7e20db8f1fe1110e8365a83de005e1 68 Gene3D G3DSA:1.20.5.300 2 47 1.0E-16 T 13-09-2016 PMA3_RS23300 9b7e20db8f1fe1110e8365a83de005e1 68 Pfam PF04102 SlyX 3 68 2.9E-22 T 13-09-2016 IPR007236 SlyX PMA3_RS23300 9b7e20db8f1fe1110e8365a83de005e1 68 Hamap MF_00715 Protein SlyX [slyX]. 2 68 15.975 T 13-09-2016 IPR007236 SlyX PMA3_RS23300 9b7e20db8f1fe1110e8365a83de005e1 68 PANTHER PTHR36508 1 68 1.1E-18 T 13-09-2016 PMA3_RS13910 b6ee5c5e4f31f4f3979673969b327c89 874 SUPERFAMILY SSF53474 97 432 2.14E-22 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13910 b6ee5c5e4f31f4f3979673969b327c89 874 Pfam PF11339 Protein of unknown function (DUF3141) 69 620 2.0E-242 T 13-09-2016 IPR024501 Protein of unknown function DUF3141 PMA3_RS13910 b6ee5c5e4f31f4f3979673969b327c89 874 Gene3D G3DSA:3.40.50.1820 134 388 3.9E-8 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS10660 4d4d532e1d84c9cbd11847726f0126f8 251 PANTHER PTHR14194 1 245 1.4E-87 T 13-09-2016 PMA3_RS10660 4d4d532e1d84c9cbd11847726f0126f8 251 SUPERFAMILY SSF51735 1 205 6.75E-27 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10660 4d4d532e1d84c9cbd11847726f0126f8 251 PANTHER PTHR14194:SF69 1 245 1.4E-87 T 13-09-2016 PMA3_RS10660 4d4d532e1d84c9cbd11847726f0126f8 251 Gene3D G3DSA:3.40.50.720 1 197 2.8E-23 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10660 4d4d532e1d84c9cbd11847726f0126f8 251 Pfam PF13460 NAD(P)H-binding 7 173 6.9E-8 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS29365 e7360fa9e18a299655317f126da67525 404 Pfam PF14486 Domain of unknown function (DUF4432) 63 367 2.2E-111 T 13-09-2016 IPR027839 Protein of unknown function DUF4432 PMA3_RS28465 ce94f2920f39ed08e278e35d30472c5c 211 SUPERFAMILY SSF54001 71 200 8.83E-45 T 13-09-2016 PMA3_RS28465 ce94f2920f39ed08e278e35d30472c5c 211 Pfam PF00877 NlpC/P60 family 90 196 6.5E-32 T 13-09-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS28465 ce94f2920f39ed08e278e35d30472c5c 211 Gene3D G3DSA:3.90.1720.10 72 203 1.8E-49 T 13-09-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS28465 ce94f2920f39ed08e278e35d30472c5c 211 PANTHER PTHR21666 79 199 3.0E-41 T 13-09-2016 PMA3_RS16545 f606ca780de11c9c41af9402fb4a66c4 179 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 10 176 16.278 T 13-09-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 PMA3_RS16545 f606ca780de11c9c41af9402fb4a66c4 179 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 11 168 2.7E-25 T 13-09-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 PMA3_RS16545 f606ca780de11c9c41af9402fb4a66c4 179 PANTHER PTHR35561 9 178 2.8E-27 T 13-09-2016 PMA3_RS16545 f606ca780de11c9c41af9402fb4a66c4 179 SUPERFAMILY SSF55144 10 177 4.01E-34 T 13-09-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase PMA3_RS16545 f606ca780de11c9c41af9402fb4a66c4 179 Pfam PF02834 LigT like Phosphoesterase 19 94 4.7E-12 T 13-09-2016 IPR014051 Phosphoesterase, HXTX PMA3_RS16545 f606ca780de11c9c41af9402fb4a66c4 179 PANTHER PTHR35561:SF1 9 178 2.8E-27 T 13-09-2016 PMA3_RS16545 f606ca780de11c9c41af9402fb4a66c4 179 Gene3D G3DSA:3.90.1140.10 11 177 2.6E-35 T 13-09-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase PMA3_RS27260 a38815f8e4d67d1e1b3405f50d938d18 200 PANTHER PTHR10746 10 200 2.3E-82 T 13-09-2016 IPR013005 50S ribosomal protein uL4 PMA3_RS27260 a38815f8e4d67d1e1b3405f50d938d18 200 SUPERFAMILY SSF52166 4 199 1.13E-69 T 13-09-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 PMA3_RS27260 a38815f8e4d67d1e1b3405f50d938d18 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 197 8.0E-62 T 13-09-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 PMA3_RS27260 a38815f8e4d67d1e1b3405f50d938d18 200 Gene3D G3DSA:3.40.1370.10 52 199 1.3E-56 T 13-09-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 PMA3_RS27260 a38815f8e4d67d1e1b3405f50d938d18 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 197 4.4E-72 T 13-09-2016 IPR013005 50S ribosomal protein uL4 PMA3_RS27260 a38815f8e4d67d1e1b3405f50d938d18 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.387 T 13-09-2016 IPR013005 50S ribosomal protein uL4 PMA3_RS06280 63f812967b31850671fceb6e770aea2e 104 Gene3D G3DSA:3.40.50.300 3 99 6.3E-38 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06280 63f812967b31850671fceb6e770aea2e 104 PANTHER PTHR10344 3 97 7.3E-35 T 13-09-2016 PMA3_RS06280 63f812967b31850671fceb6e770aea2e 104 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 98 6.4E-29 T 13-09-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 PMA3_RS06280 63f812967b31850671fceb6e770aea2e 104 SUPERFAMILY SSF52540 3 98 6.93E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06280 63f812967b31850671fceb6e770aea2e 104 Pfam PF02223 Thymidylate kinase 8 98 5.0E-27 T 13-09-2016 PMA3_RS02990 84293f3ceb6b66aa9a5f54a53ed340b8 431 PANTHER PTHR11119:SF9 1 418 4.6E-174 T 13-09-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 PMA3_RS02990 84293f3ceb6b66aa9a5f54a53ed340b8 431 Pfam PF00860 Permease family 17 391 1.4E-57 T 13-09-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS02990 84293f3ceb6b66aa9a5f54a53ed340b8 431 PIRSF PIRSF005353 1 430 9.2E-180 T 13-09-2016 IPR026033 Purine permease PbuG-like PMA3_RS02990 84293f3ceb6b66aa9a5f54a53ed340b8 431 PANTHER PTHR11119 1 418 4.6E-174 T 13-09-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS15950 0f897889df9d86d01bbb631bd0116476 279 PANTHER PTHR22572:SF14 4 277 1.3E-100 T 13-09-2016 PMA3_RS15950 0f897889df9d86d01bbb631bd0116476 279 Pfam PF00483 Nucleotidyl transferase 9 267 1.6E-30 T 13-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PMA3_RS15950 0f897889df9d86d01bbb631bd0116476 279 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 264 3.2E-121 T 13-09-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 PMA3_RS15950 0f897889df9d86d01bbb631bd0116476 279 SUPERFAMILY SSF53448 2 270 1.67E-64 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS15950 0f897889df9d86d01bbb631bd0116476 279 PANTHER PTHR22572 4 277 1.3E-100 T 13-09-2016 PMA3_RS15950 0f897889df9d86d01bbb631bd0116476 279 Gene3D G3DSA:3.90.550.10 2 267 2.5E-65 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS08260 47237e9edea8ef05d7e8c1eaa1fa19fe 96 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 90 4.8E-19 T 13-09-2016 PMA3_RS08260 47237e9edea8ef05d7e8c1eaa1fa19fe 96 Gene3D G3DSA:3.10.20.30 31 84 7.3E-4 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS08260 47237e9edea8ef05d7e8c1eaa1fa19fe 96 SUPERFAMILY SSF54292 16 91 5.74E-14 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS22915 d33647c805b19c0ec74dd5f67d3ffdc6 349 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 1.0E-81 T 13-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PMA3_RS22915 d33647c805b19c0ec74dd5f67d3ffdc6 349 PANTHER PTHR22893 1 349 1.5E-166 T 13-09-2016 PMA3_RS22915 d33647c805b19c0ec74dd5f67d3ffdc6 349 SUPERFAMILY SSF51395 1 348 2.69E-118 T 13-09-2016 PMA3_RS22915 d33647c805b19c0ec74dd5f67d3ffdc6 349 Gene3D G3DSA:3.20.20.70 1 349 2.0E-126 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS22915 d33647c805b19c0ec74dd5f67d3ffdc6 349 PANTHER PTHR22893:SF14 1 349 1.5E-166 T 13-09-2016 PMA3_RS28695 f674a524b1e353621f7a46795902744b 458 Gene3D G3DSA:3.40.50.300 7 81 2.1E-23 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28695 f674a524b1e353621f7a46795902744b 458 Gene3D G3DSA:3.40.50.300 113 167 2.1E-23 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28695 f674a524b1e353621f7a46795902744b 458 Pfam PF01926 50S ribosome-binding GTPase 11 156 3.8E-17 T 13-09-2016 IPR006073 GTP binding domain GO:0005525 PMA3_RS28695 f674a524b1e353621f7a46795902744b 458 PANTHER PTHR11649 8 83 3.2E-16 T 13-09-2016 PMA3_RS28695 f674a524b1e353621f7a46795902744b 458 PANTHER PTHR11649 120 156 3.2E-16 T 13-09-2016 PMA3_RS28695 f674a524b1e353621f7a46795902744b 458 Pfam PF11981 Domain of unknown function (DUF3482) 169 455 6.6E-113 T 13-09-2016 IPR021871 Protein of unknown function DUF3482 PMA3_RS28695 f674a524b1e353621f7a46795902744b 458 SUPERFAMILY SSF52540 4 167 3.9E-20 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS17880 0cbe2067a987605bcab74bd018b365cf 337 Pfam PF05544 Proline racemase 9 335 2.5E-89 T 13-09-2016 IPR008794 Proline racemase family PMA3_RS17880 0cbe2067a987605bcab74bd018b365cf 337 SUPERFAMILY SSF54506 1 334 1.28E-92 T 13-09-2016 PMA3_RS17880 0cbe2067a987605bcab74bd018b365cf 337 PIRSF PIRSF029792 1 337 2.7E-99 T 13-09-2016 IPR008794 Proline racemase family PMA3_RS17880 0cbe2067a987605bcab74bd018b365cf 337 PANTHER PTHR33442 1 337 1.8E-99 T 13-09-2016 PMA3_RS17880 0cbe2067a987605bcab74bd018b365cf 337 Gene3D G3DSA:3.10.310.10 1 156 2.2E-57 T 13-09-2016 PMA3_RS17880 0cbe2067a987605bcab74bd018b365cf 337 Gene3D G3DSA:3.10.310.10 157 324 9.3E-51 T 13-09-2016 PMA3_RS26255 02d08e0a60878223ad4f5b03234e4af1 446 PANTHER PTHR24064 4 428 7.3E-70 T 13-09-2016 PMA3_RS26255 02d08e0a60878223ad4f5b03234e4af1 446 SUPERFAMILY SSF103473 10 434 6.54E-81 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS26255 02d08e0a60878223ad4f5b03234e4af1 446 Pfam PF00083 Sugar (and other) transporter 54 392 1.4E-35 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS26255 02d08e0a60878223ad4f5b03234e4af1 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS26255 02d08e0a60878223ad4f5b03234e4af1 446 PANTHER PTHR24064:SF293 4 428 7.3E-70 T 13-09-2016 PMA3_RS26255 02d08e0a60878223ad4f5b03234e4af1 446 Gene3D G3DSA:1.20.1250.20 16 200 4.7E-33 T 13-09-2016 PMA3_RS26255 02d08e0a60878223ad4f5b03234e4af1 446 Gene3D G3DSA:1.20.1250.20 252 436 4.1E-25 T 13-09-2016 PMA3_RS10690 8963866b6820ed9b84807ae4c694392e 202 Gene3D G3DSA:1.20.950.20 8 199 1.4E-44 T 13-09-2016 PMA3_RS10690 8963866b6820ed9b84807ae4c694392e 202 PANTHER PTHR30485:SF1 9 200 5.8E-47 T 13-09-2016 PMA3_RS10690 8963866b6820ed9b84807ae4c694392e 202 PANTHER PTHR30485 9 200 5.8E-47 T 13-09-2016 PMA3_RS10690 8963866b6820ed9b84807ae4c694392e 202 Pfam PF01292 Prokaryotic cytochrome b561 9 195 4.1E-25 T 13-09-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PMA3_RS10690 8963866b6820ed9b84807ae4c694392e 202 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 163 185 1.9E-5 T 13-09-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 PMA3_RS10690 8963866b6820ed9b84807ae4c694392e 202 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 11 34 1.9E-5 T 13-09-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 PMA3_RS10690 8963866b6820ed9b84807ae4c694392e 202 SUPERFAMILY SSF81342 8 199 1.02E-35 T 13-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PMA3_RS24610 57f63c97ef4601ede663e192645bc0d4 496 SUPERFAMILY SSF53448 153 257 2.93E-10 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS24610 57f63c97ef4601ede663e192645bc0d4 496 SUPERFAMILY SSF53448 288 362 2.93E-10 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS24610 57f63c97ef4601ede663e192645bc0d4 496 Pfam PF13641 Glycosyltransferase like family 2 89 345 1.9E-51 T 13-09-2016 PMA3_RS24610 57f63c97ef4601ede663e192645bc0d4 496 ProDom PD339107 ALGINATE ALG8 BIOSYNTHESIS TRANSFERASE TRANSMEMBRANE MEMBRANE 2.4.1.- GLYCOSYL GLYCOSYLTRANSFERASE PRECURSOR 4 496 0.0 T 13-09-2016 PMA3_RS23030 686149019b6d3c909d23330e493878f9 155 Gene3D G3DSA:1.20.1260.10 4 141 7.7E-10 T 13-09-2016 IPR012347 Ferritin-related PMA3_RS23030 686149019b6d3c909d23330e493878f9 155 Pfam PF09537 Domain of unknown function (DUF2383) 8 117 2.7E-45 T 13-09-2016 IPR019052 Domain of unknown function DUF2383 PMA3_RS23030 686149019b6d3c909d23330e493878f9 155 PIRSF PIRSF029477 1 154 2.6E-70 T 13-09-2016 IPR016920 Uncharacterised conserved protein UCP029477 PMA3_RS23030 686149019b6d3c909d23330e493878f9 155 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 9 148 5.0E-50 T 13-09-2016 IPR011971 Conserved hypothetical protein CHP02284 PMA3_RS23030 686149019b6d3c909d23330e493878f9 155 SUPERFAMILY SSF47240 9 121 7.81E-8 T 13-09-2016 IPR009078 Ferritin-like superfamily PMA3_RS24625 abd1c84ad200222a251f07a5ece05c4f 495 Pfam PF13372 Alginate export 31 490 5.5E-99 T 13-09-2016 IPR025388 Alginate export domain UniPathway: UPA00286 PMA3_RS15600 3869367ebdabf37860afb54ba4e41a0a 431 Gene3D G3DSA:2.40.160.10 47 431 4.2E-148 T 13-09-2016 IPR023614 Porin domain PMA3_RS15600 3869367ebdabf37860afb54ba4e41a0a 431 PANTHER PTHR34596 13 431 1.3E-153 T 13-09-2016 PMA3_RS15600 3869367ebdabf37860afb54ba4e41a0a 431 Pfam PF03573 outer membrane porin, OprD family 42 429 6.3E-149 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS26205 268ebf5183ae20a166ec7a6389db6a77 293 PRINTS PR01994 Antirepressor protein ANT signature 69 92 1.2E-25 T 13-09-2016 IPR018875 Antirepressor protein ANT, N-terminal PMA3_RS26205 268ebf5183ae20a166ec7a6389db6a77 293 PRINTS PR01994 Antirepressor protein ANT signature 93 115 1.2E-25 T 13-09-2016 IPR018875 Antirepressor protein ANT, N-terminal PMA3_RS26205 268ebf5183ae20a166ec7a6389db6a77 293 PRINTS PR01994 Antirepressor protein ANT signature 25 46 1.2E-25 T 13-09-2016 IPR018875 Antirepressor protein ANT, N-terminal PMA3_RS26205 268ebf5183ae20a166ec7a6389db6a77 293 Pfam PF10547 P22_AR N-terminal domain 8 115 2.6E-38 T 13-09-2016 IPR018875 Antirepressor protein ANT, N-terminal PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 Gene3D G3DSA:3.40.50.720 1 248 3.6E-85 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.7E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 247 1.8E-61 T 13-09-2016 PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 SUPERFAMILY SSF51735 1 248 9.07E-82 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PANTHER PTHR24322 12 140 5.4E-48 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PANTHER PTHR24322 156 192 5.4E-48 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 191 0.003 T 13-09-2016 PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.2E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.2E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11790 ae3a481b9442eed222eff30f639fac6b 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.2E-11 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS29005 f27b46aaa4e3bfcfdcbae8182f3ac0d8 127 SUPERFAMILY SSF51230 4 126 4.19E-41 T 13-09-2016 IPR011053 Single hybrid motif PMA3_RS29005 f27b46aaa4e3bfcfdcbae8182f3ac0d8 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 125 6.3E-46 T 13-09-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 PMA3_RS29005 f27b46aaa4e3bfcfdcbae8182f3ac0d8 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 13-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PMA3_RS29005 f27b46aaa4e3bfcfdcbae8182f3ac0d8 127 Gene3D G3DSA:2.40.50.100 7 126 3.3E-48 T 13-09-2016 PMA3_RS29005 f27b46aaa4e3bfcfdcbae8182f3ac0d8 127 PANTHER PTHR11715 1 127 6.6E-66 T 13-09-2016 IPR002930 Glycine cleavage system H-protein PMA3_RS29005 f27b46aaa4e3bfcfdcbae8182f3ac0d8 127 Pfam PF01597 Glycine cleavage H-protein 8 124 6.9E-42 T 13-09-2016 IPR002930 Glycine cleavage system H-protein PMA3_RS29005 f27b46aaa4e3bfcfdcbae8182f3ac0d8 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 29.995 T 13-09-2016 IPR002930 Glycine cleavage system H-protein PMA3_RS00785 67b83c5ad69dffa36ef2799997cfec69 127 PANTHER PTHR12418:SF27 1 126 1.8E-33 T 13-09-2016 PMA3_RS00785 67b83c5ad69dffa36ef2799997cfec69 127 Gene3D G3DSA:3.10.129.10 7 127 1.5E-38 T 13-09-2016 IPR029069 HotDog domain PMA3_RS00785 67b83c5ad69dffa36ef2799997cfec69 127 Pfam PF03061 Thioesterase superfamily 42 116 8.7E-20 T 13-09-2016 IPR006683 Thioesterase domain PMA3_RS00785 67b83c5ad69dffa36ef2799997cfec69 127 SUPERFAMILY SSF54637 10 127 6.17E-34 T 13-09-2016 IPR029069 HotDog domain PMA3_RS00785 67b83c5ad69dffa36ef2799997cfec69 127 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 12 125 1.2E-25 T 13-09-2016 IPR003736 Phenylacetic acid degradation-related domain PMA3_RS00785 67b83c5ad69dffa36ef2799997cfec69 127 PANTHER PTHR12418 1 126 1.8E-33 T 13-09-2016 PMA3_RS22840 f1440d5b2322ebb95410dca66163edb3 118 Pfam PF16931 Putative phage holin 12 116 2.5E-7 T 13-09-2016 IPR032637 Putative phage holin-like PMA3_RS21655 cac5a05264faffee953acb37a9e08ab0 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 256 1.0E-76 T 13-09-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 PMA3_RS21655 cac5a05264faffee953acb37a9e08ab0 260 Pfam PF01311 Bacterial export proteins, family 1 16 245 1.8E-66 T 13-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PMA3_RS21655 cac5a05264faffee953acb37a9e08ab0 260 PANTHER PTHR30065:SF1 4 260 2.5E-88 T 13-09-2016 PMA3_RS21655 cac5a05264faffee953acb37a9e08ab0 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 24 45 6.8E-26 T 13-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PMA3_RS21655 cac5a05264faffee953acb37a9e08ab0 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 6.8E-26 T 13-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PMA3_RS21655 cac5a05264faffee953acb37a9e08ab0 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 83 102 6.8E-26 T 13-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PMA3_RS21655 cac5a05264faffee953acb37a9e08ab0 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 6.8E-26 T 13-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PMA3_RS21655 cac5a05264faffee953acb37a9e08ab0 260 PANTHER PTHR30065 4 260 2.5E-88 T 13-09-2016 PMA3_RS03930 4246084053472ce80b4f77f5956a4e6e 209 Pfam PF01810 LysE type translocator 16 205 2.5E-34 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS03930 4246084053472ce80b4f77f5956a4e6e 209 PIRSF PIRSF006324 1 208 3.3E-53 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS03930 4246084053472ce80b4f77f5956a4e6e 209 PANTHER PTHR30086 1 207 1.8E-58 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS03930 4246084053472ce80b4f77f5956a4e6e 209 PANTHER PTHR30086:SF2 1 207 1.8E-58 T 13-09-2016 PMA3_RS00265 bc1b89ee499cd3a33ed65faafe1f7c40 373 SUPERFAMILY SSF52283 2 167 1.19E-49 T 13-09-2016 PMA3_RS00265 bc1b89ee499cd3a33ed65faafe1f7c40 373 SMART SM01002 145 314 7.1E-86 T 13-09-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PMA3_RS00265 bc1b89ee499cd3a33ed65faafe1f7c40 373 Gene3D G3DSA:3.40.50.720 168 199 1.2E-5 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS00265 bc1b89ee499cd3a33ed65faafe1f7c40 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 370 4.6E-74 T 13-09-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PMA3_RS00265 bc1b89ee499cd3a33ed65faafe1f7c40 373 Gene3D G3DSA:3.40.50.1770 200 368 2.1E-39 T 13-09-2016 PMA3_RS00265 bc1b89ee499cd3a33ed65faafe1f7c40 373 Gene3D G3DSA:3.40.50.1770 2 167 7.4E-56 T 13-09-2016 PMA3_RS00265 bc1b89ee499cd3a33ed65faafe1f7c40 373 SUPERFAMILY SSF51735 136 318 2.87E-37 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS00265 bc1b89ee499cd3a33ed65faafe1f7c40 373 SMART SM01003 4 136 8.2E-65 T 13-09-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PMA3_RS00265 bc1b89ee499cd3a33ed65faafe1f7c40 373 PANTHER PTHR10160 3 371 5.9E-173 T 13-09-2016 PMA3_RS00265 bc1b89ee499cd3a33ed65faafe1f7c40 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.1E-41 T 13-09-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PMA3_RS13865 df8b2027b13544b964e6dd27a42442a1 217 PANTHER PTHR30074 1 216 1.7E-64 T 13-09-2016 PMA3_RS13865 df8b2027b13544b964e6dd27a42442a1 217 Pfam PF01292 Prokaryotic cytochrome b561 8 185 3.3E-19 T 13-09-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PMA3_RS13865 df8b2027b13544b964e6dd27a42442a1 217 SUPERFAMILY SSF81342 4 210 2.59E-50 T 13-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PMA3_RS13865 df8b2027b13544b964e6dd27a42442a1 217 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 5 205 2.5E-59 T 13-09-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 PMA3_RS13865 df8b2027b13544b964e6dd27a42442a1 217 Gene3D G3DSA:1.20.950.20 4 211 3.3E-62 T 13-09-2016 PMA3_RS29645 a98f50267e9970293e20fc40c6769962 55 PIRSF PIRSF000071 1 55 2.1E-23 T 13-09-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 PMA3_RS29645 a98f50267e9970293e20fc40c6769962 55 Gene3D G3DSA:2.20.28.10 1 54 1.9E-26 T 13-09-2016 IPR004039 Rubredoxin-type fold PMA3_RS29645 a98f50267e9970293e20fc40c6769962 55 SUPERFAMILY SSF57802 1 54 2.52E-22 T 13-09-2016 PMA3_RS29645 a98f50267e9970293e20fc40c6769962 55 Pfam PF00301 Rubredoxin 3 49 7.4E-22 T 13-09-2016 IPR024935 Rubredoxin domain GO:0005506 PMA3_RS29645 a98f50267e9970293e20fc40c6769962 55 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 13-09-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 PMA3_RS29645 a98f50267e9970293e20fc40c6769962 55 PRINTS PR00163 Rubredoxin signature 33 49 3.1E-8 T 13-09-2016 IPR024935 Rubredoxin domain GO:0005506 PMA3_RS29645 a98f50267e9970293e20fc40c6769962 55 PRINTS PR00163 Rubredoxin signature 3 19 3.1E-8 T 13-09-2016 IPR024935 Rubredoxin domain GO:0005506 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 PANTHER PTHR23023 5 319 3.7E-88 T 13-09-2016 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 SUPERFAMILY SSF51905 169 323 1.12E-9 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 SUPERFAMILY SSF51905 6 190 1.13E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 11 317 1.1E-37 T 13-09-2016 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 3.8E-9 T 13-09-2016 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 289 3.8E-9 T 13-09-2016 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.8E-9 T 13-09-2016 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 Gene3D G3DSA:3.50.50.60 244 317 5.9E-7 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 Gene3D G3DSA:3.50.50.60 183 212 5.9E-7 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.3E-11 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 134 1.3E-11 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 165 189 1.3E-11 T 13-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PMA3_RS09405 a7433d247ceed7d5a6edbe9a0845b734 352 Gene3D G3DSA:3.50.50.60 8 182 1.2E-48 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS18390 1bf585eef7b475437b9f68d213f977b6 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.6E-16 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS18390 1bf585eef7b475437b9f68d213f977b6 203 SUPERFAMILY SSF48498 79 188 6.67E-17 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS18390 1bf585eef7b475437b9f68d213f977b6 203 Gene3D G3DSA:1.10.10.60 4 59 1.7E-19 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18390 1bf585eef7b475437b9f68d213f977b6 203 PANTHER PTHR30328:SF18 5 188 1.0E-19 T 13-09-2016 PMA3_RS18390 1bf585eef7b475437b9f68d213f977b6 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.9E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS18390 1bf585eef7b475437b9f68d213f977b6 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.9E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS18390 1bf585eef7b475437b9f68d213f977b6 203 PANTHER PTHR30328 5 188 1.0E-19 T 13-09-2016 PMA3_RS18390 1bf585eef7b475437b9f68d213f977b6 203 SUPERFAMILY SSF46689 3 72 4.24E-17 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS18390 1bf585eef7b475437b9f68d213f977b6 203 Gene3D G3DSA:1.10.357.10 60 188 1.5E-24 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS23230 94862b82883b798fcbd4475bec2bfd75 167 SUPERFAMILY SSF103088 60 166 9.68E-35 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS23230 94862b82883b798fcbd4475bec2bfd75 167 PANTHER PTHR30128:SF18 51 165 2.8E-52 T 13-09-2016 PMA3_RS23230 94862b82883b798fcbd4475bec2bfd75 167 Pfam PF00691 OmpA family 67 161 3.0E-24 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS23230 94862b82883b798fcbd4475bec2bfd75 167 Gene3D G3DSA:3.30.1330.60 58 166 1.1E-35 T 13-09-2016 IPR006665 OmpA-like domain PMA3_RS23230 94862b82883b798fcbd4475bec2bfd75 167 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 165 8.8E-42 T 13-09-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 PMA3_RS23230 94862b82883b798fcbd4475bec2bfd75 167 PRINTS PR01021 OMPA domain signature 112 128 6.3E-20 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS23230 94862b82883b798fcbd4475bec2bfd75 167 PRINTS PR01021 OMPA domain signature 97 112 6.3E-20 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS23230 94862b82883b798fcbd4475bec2bfd75 167 PRINTS PR01021 OMPA domain signature 68 90 6.3E-20 T 13-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PMA3_RS23230 94862b82883b798fcbd4475bec2bfd75 167 PANTHER PTHR30128 51 165 2.8E-52 T 13-09-2016 PMA3_RS23230 94862b82883b798fcbd4475bec2bfd75 167 ProSitePatterns PS01068 OmpA-like domain. 99 143 - T 13-09-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PMA3_RS08755 892af950deabc5a387fd3cf7a912aca8 160 PIRSF PIRSF029548 1 160 3.3E-104 T 13-09-2016 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type PMA3_RS08755 892af950deabc5a387fd3cf7a912aca8 160 SUPERFAMILY SSF52091 6 106 3.92E-13 T 13-09-2016 IPR002645 STAS domain PMA3_RS08755 892af950deabc5a387fd3cf7a912aca8 160 Gene3D G3DSA:3.30.750.24 5 106 1.8E-13 T 13-09-2016 IPR002645 STAS domain PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 13-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 PANTHER PTHR30154 1 154 8.5E-69 T 13-09-2016 PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 Gene3D G3DSA:1.10.10.10 1 54 4.7E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 SUPERFAMILY SSF54909 63 152 5.63E-20 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 SUPERFAMILY SSF46785 2 62 1.4E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 1.2E-19 T 13-09-2016 PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 PANTHER PTHR30154:SF28 1 154 8.5E-69 T 13-09-2016 PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 Gene3D G3DSA:3.30.70.920 56 140 4.9E-29 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.3E-17 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.3E-17 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.3E-17 T 13-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 1.4E-20 T 13-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PMA3_RS29950 0f3b77e493e060b28631392db964c743 157 SMART SM00344 3 112 8.0E-43 T 13-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PMA3_RS23685 2a23b753c8eaf0f3976f6beb9af0d056 243 Gene3D G3DSA:2.30.110.10 4 147 8.7E-53 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS23685 2a23b753c8eaf0f3976f6beb9af0d056 243 Pfam PF10615 Protein of unknown function (DUF2470) 161 227 2.4E-15 T 13-09-2016 IPR019595 Domain of unknown function DUF2470 PMA3_RS23685 2a23b753c8eaf0f3976f6beb9af0d056 243 SUPERFAMILY SSF50475 3 235 1.1E-53 T 13-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PMA3_RS23685 2a23b753c8eaf0f3976f6beb9af0d056 243 PANTHER PTHR13343:SF4 4 243 2.0E-45 T 13-09-2016 PMA3_RS23685 2a23b753c8eaf0f3976f6beb9af0d056 243 PANTHER PTHR13343 4 243 2.0E-45 T 13-09-2016 PMA3_RS23685 2a23b753c8eaf0f3976f6beb9af0d056 243 Gene3D G3DSA:3.20.180.10 152 238 1.4E-31 T 13-09-2016 IPR019595 Domain of unknown function DUF2470 PMA3_RS23685 2a23b753c8eaf0f3976f6beb9af0d056 243 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 4 147 1.7E-14 T 13-09-2016 PMA3_RS22595 a07e4f0a7661fe4422aca138f59d1535 504 PANTHER PTHR35342:SF4 2 504 7.2E-279 T 13-09-2016 PMA3_RS22595 a07e4f0a7661fe4422aca138f59d1535 504 PANTHER PTHR35342 2 504 7.2E-279 T 13-09-2016 PMA3_RS22595 a07e4f0a7661fe4422aca138f59d1535 504 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 3.0E-137 T 13-09-2016 IPR002823 Protein of unknown function DUF112, transmembrane PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 PANTHER PTHR30330 1 466 1.6E-240 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 PANTHER PTHR30330:SF1 1 466 1.6E-240 T 13-09-2016 PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 84 99 - T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 TIGRFAM TIGR00835 agcS: amino acid carrier protein 14 432 4.2E-141 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 Pfam PF01235 Sodium:alanine symporter family 48 445 1.0E-149 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 PRINTS PR00175 Sodium/alanine symporter signature 84 106 3.0E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 PRINTS PR00175 Sodium/alanine symporter signature 401 421 3.0E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 PRINTS PR00175 Sodium/alanine symporter signature 294 312 3.0E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 PRINTS PR00175 Sodium/alanine symporter signature 175 193 3.0E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 PRINTS PR00175 Sodium/alanine symporter signature 203 222 3.0E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS26115 903fc9679c125889ffe616b7a366ba98 484 PRINTS PR00175 Sodium/alanine symporter signature 340 362 3.0E-50 T 13-09-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PMA3_RS03075 7cec150a70a93bb04be08104252dcede 238 Gene3D G3DSA:1.20.120.530 89 227 5.0E-26 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS03075 7cec150a70a93bb04be08104252dcede 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 81 3.9E-5 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS03075 7cec150a70a93bb04be08104252dcede 238 SUPERFAMILY SSF48008 93 226 6.02E-22 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS03075 7cec150a70a93bb04be08104252dcede 238 Gene3D G3DSA:1.10.10.10 17 87 1.5E-11 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03075 7cec150a70a93bb04be08104252dcede 238 SUPERFAMILY SSF46785 19 90 8.47E-10 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS03075 7cec150a70a93bb04be08104252dcede 238 Pfam PF07729 FCD domain 97 217 3.6E-19 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS03075 7cec150a70a93bb04be08104252dcede 238 SMART SM00895 96 219 3.4E-12 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS12200 6288897bd66fd82a6d3c04b691a32122 340 SUPERFAMILY SSF52096 88 199 6.56E-27 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS12200 6288897bd66fd82a6d3c04b691a32122 340 SUPERFAMILY SSF52096 230 289 6.56E-27 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS12200 6288897bd66fd82a6d3c04b691a32122 340 Pfam PF08496 Peptidase family S49 N-terminal 2 148 2.0E-52 T 13-09-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 PMA3_RS12200 6288897bd66fd82a6d3c04b691a32122 340 PANTHER PTHR33209 2 340 3.7E-187 T 13-09-2016 PMA3_RS12200 6288897bd66fd82a6d3c04b691a32122 340 Gene3D G3DSA:3.90.226.10 261 299 5.8E-31 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS12200 6288897bd66fd82a6d3c04b691a32122 340 Gene3D G3DSA:3.90.226.10 90 195 5.8E-31 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS12200 6288897bd66fd82a6d3c04b691a32122 340 Pfam PF01343 Peptidase family S49 152 299 1.0E-44 T 13-09-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PMA3_RS12200 6288897bd66fd82a6d3c04b691a32122 340 PANTHER PTHR33209:SF2 2 340 3.7E-187 T 13-09-2016 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 95 235 8.5E-12 T 13-09-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 PANTHER PTHR11493 11 404 4.5E-68 T 13-09-2016 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 11 399 1.4E-118 T 13-09-2016 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 SUPERFAMILY SSF56014 338 435 1.96E-15 T 13-09-2016 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 SUPERFAMILY SSF56014 95 238 1.2E-22 T 13-09-2016 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 SUPERFAMILY SSF55124 3 89 1.14E-14 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 Gene3D G3DSA:3.30.413.10 337 405 3.3E-11 T 13-09-2016 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 Gene3D G3DSA:3.30.413.10 95 232 1.9E-11 T 13-09-2016 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 SUPERFAMILY SSF55124 192 328 1.42E-19 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 Gene3D G3DSA:3.90.480.10 251 329 3.2E-31 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 Gene3D G3DSA:3.90.480.10 24 92 3.2E-31 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 258 323 2.1E-16 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS02495 8b190e587ba64a1a88f1869aec2ee20c 440 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 25 86 3.5E-11 T 13-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PMA3_RS26060 13c62ba19c5e702ca78cf5ec8808213a 351 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 205 5.9E-44 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS26060 13c62ba19c5e702ca78cf5ec8808213a 351 PANTHER PTHR11019 254 342 3.0E-22 T 13-09-2016 PMA3_RS26060 13c62ba19c5e702ca78cf5ec8808213a 351 Gene3D G3DSA:1.10.10.60 291 338 1.5E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26060 13c62ba19c5e702ca78cf5ec8808213a 351 SMART SM00342 252 334 5.7E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS26060 13c62ba19c5e702ca78cf5ec8808213a 351 Pfam PF12833 Helix-turn-helix domain 258 334 5.4E-16 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS26060 13c62ba19c5e702ca78cf5ec8808213a 351 PANTHER PTHR11019:SF52 254 342 3.0E-22 T 13-09-2016 PMA3_RS26060 13c62ba19c5e702ca78cf5ec8808213a 351 SUPERFAMILY SSF46689 287 334 3.58E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS26905 8cd6246c438b42f14ba425523710f5e2 627 Pfam PF00593 TonB dependent receptor 401 624 1.9E-31 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS26905 8cd6246c438b42f14ba425523710f5e2 627 PANTHER PTHR32552 1 625 4.2E-58 T 13-09-2016 PMA3_RS26905 8cd6246c438b42f14ba425523710f5e2 627 SUPERFAMILY SSF56935 34 623 2.66E-114 T 13-09-2016 PMA3_RS26905 8cd6246c438b42f14ba425523710f5e2 627 Gene3D G3DSA:2.170.130.10 25 157 5.0E-35 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS26905 8cd6246c438b42f14ba425523710f5e2 627 Gene3D G3DSA:2.40.170.20 158 624 9.3E-81 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS26905 8cd6246c438b42f14ba425523710f5e2 627 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 151 1.3E-29 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS18260 9f16e559f7382c7fafd3f551838ddd43 317 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 88 235 3.0E-8 T 13-09-2016 IPR025859 P-aminobenzoate N-oxygenase AurF PMA3_RS18260 9f16e559f7382c7fafd3f551838ddd43 317 SUPERFAMILY SSF47240 101 236 5.27E-8 T 13-09-2016 IPR009078 Ferritin-like superfamily PMA3_RS09390 23ccfbbe192fc7c0f5450ef83f35e314 118 PANTHER PTHR30204:SF15 11 118 7.0E-34 T 13-09-2016 PMA3_RS09390 23ccfbbe192fc7c0f5450ef83f35e314 118 Pfam PF13411 MerR HTH family regulatory protein 19 86 1.2E-22 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS09390 23ccfbbe192fc7c0f5450ef83f35e314 118 PANTHER PTHR30204 11 118 7.0E-34 T 13-09-2016 PMA3_RS09390 23ccfbbe192fc7c0f5450ef83f35e314 118 SUPERFAMILY SSF46955 17 114 5.04E-20 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS09390 23ccfbbe192fc7c0f5450ef83f35e314 118 Gene3D G3DSA:1.10.1660.10 19 113 1.5E-17 T 13-09-2016 PMA3_RS09390 23ccfbbe192fc7c0f5450ef83f35e314 118 SMART SM00422 19 89 2.6E-8 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS00320 6b2c9b08a60754c243415561adf98e48 260 Gene3D G3DSA:1.20.910.10 66 245 1.2E-10 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS00320 6b2c9b08a60754c243415561adf98e48 260 SUPERFAMILY SSF48613 94 247 1.0E-10 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS00320 6b2c9b08a60754c243415561adf98e48 260 Pfam PF11251 Protein of unknown function (DUF3050) 16 244 5.4E-90 T 13-09-2016 IPR024423 Protein of unknown function DUF3050 PMA3_RS30030 213b4732cd37d96815f369eb545eee66 85 SUPERFAMILY SSF81333 3 78 1.15E-18 T 13-09-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PMA3_RS30030 213b4732cd37d96815f369eb545eee66 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.5E-6 T 13-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 PMA3_RS30030 213b4732cd37d96815f369eb545eee66 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.5E-6 T 13-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 PMA3_RS30030 213b4732cd37d96815f369eb545eee66 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.5E-6 T 13-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 PMA3_RS30030 213b4732cd37d96815f369eb545eee66 85 Gene3D G3DSA:1.20.20.10 2 78 1.8E-32 T 13-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 PMA3_RS30030 213b4732cd37d96815f369eb545eee66 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 13-09-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site PMA3_RS30030 213b4732cd37d96815f369eb545eee66 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.624 T 13-09-2016 PMA3_RS30030 213b4732cd37d96815f369eb545eee66 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.4E-29 T 13-09-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PMA3_RS30030 213b4732cd37d96815f369eb545eee66 85 Pfam PF00137 ATP synthase subunit C 10 72 3.0E-9 T 13-09-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PMA3_RS13315 bf2962bd2c82d29a84b0cf90721c15df 203 PANTHER PTHR10204:SF37 1 198 3.0E-78 T 13-09-2016 PMA3_RS13315 bf2962bd2c82d29a84b0cf90721c15df 203 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 199 30.265 T 13-09-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 PMA3_RS13315 bf2962bd2c82d29a84b0cf90721c15df 203 SUPERFAMILY SSF52218 1 197 4.51E-52 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS13315 bf2962bd2c82d29a84b0cf90721c15df 203 PANTHER PTHR10204 1 198 3.0E-78 T 13-09-2016 PMA3_RS13315 bf2962bd2c82d29a84b0cf90721c15df 203 Gene3D G3DSA:3.40.50.360 1 197 1.6E-61 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS13315 bf2962bd2c82d29a84b0cf90721c15df 203 Pfam PF02525 Flavodoxin-like fold 1 198 4.1E-45 T 13-09-2016 IPR003680 Flavodoxin-like fold PMA3_RS03820 c0a8658dd2379dcd2ffdd230c559ccbf 319 PANTHER PTHR30087 1 319 8.3E-137 T 13-09-2016 PMA3_RS03820 c0a8658dd2379dcd2ffdd230c559ccbf 319 Pfam PF08349 Protein of unknown function (DUF1722) 194 310 3.3E-44 T 13-09-2016 IPR013560 Domain of unknown function DUF1722 PMA3_RS03820 c0a8658dd2379dcd2ffdd230c559ccbf 319 Pfam PF04463 Protein of unknown function (DUF523) 10 151 3.6E-33 T 13-09-2016 IPR007553 Domain of unknown function DUF523 PMA3_RS03820 c0a8658dd2379dcd2ffdd230c559ccbf 319 PIRSF PIRSF037004 1 319 1.4E-132 T 13-09-2016 IPR017087 Uncharacterised conserved protein UCP037004 PMA3_RS03820 c0a8658dd2379dcd2ffdd230c559ccbf 319 PANTHER PTHR30087:SF0 1 319 8.3E-137 T 13-09-2016 PMA3_RS03840 34da67081cc0bb7a768a4b0a6bd2b97a 424 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 9 407 3.6E-112 T 13-09-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS03840 34da67081cc0bb7a768a4b0a6bd2b97a 424 PANTHER PTHR11119 8 415 1.6E-170 T 13-09-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS03840 34da67081cc0bb7a768a4b0a6bd2b97a 424 Pfam PF00860 Permease family 12 379 5.6E-94 T 13-09-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS03840 34da67081cc0bb7a768a4b0a6bd2b97a 424 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 327 347 - T 13-09-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS03840 34da67081cc0bb7a768a4b0a6bd2b97a 424 PANTHER PTHR11119:SF49 8 415 1.6E-170 T 13-09-2016 PMA3_RS29860 96d3da83176f576232417103efd7d163 135 SMART SM00860 21 112 0.0054 T 13-09-2016 IPR018958 SMI1/KNR4-like domain PMA3_RS29860 96d3da83176f576232417103efd7d163 135 Gene3D G3DSA:3.40.1580.10 2 135 2.5E-61 T 13-09-2016 IPR018958 SMI1/KNR4-like domain PMA3_RS29860 96d3da83176f576232417103efd7d163 135 SUPERFAMILY SSF160631 2 134 3.4E-43 T 13-09-2016 PMA3_RS29860 96d3da83176f576232417103efd7d163 135 Pfam PF14567 SMI1-KNR4 cell-wall 2 133 7.5E-44 T 13-09-2016 PMA3_RS21020 d30f91dea17bf744b66878b7420c970f 402 Pfam PF07690 Major Facilitator Superfamily 21 348 1.6E-14 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS21020 d30f91dea17bf744b66878b7420c970f 402 SUPERFAMILY SSF103473 13 392 3.53E-33 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS21020 d30f91dea17bf744b66878b7420c970f 402 Gene3D G3DSA:1.20.1250.20 15 191 2.6E-20 T 13-09-2016 PMA3_RS21020 d30f91dea17bf744b66878b7420c970f 402 Gene3D G3DSA:1.20.1250.20 243 391 8.4E-5 T 13-09-2016 PMA3_RS19350 fd2298b3722776ef29640ef1fc9ad5c1 448 PANTHER PTHR13847:SF196 18 431 2.1E-52 T 13-09-2016 PMA3_RS19350 fd2298b3722776ef29640ef1fc9ad5c1 448 PANTHER PTHR13847 18 431 2.1E-52 T 13-09-2016 PMA3_RS19350 fd2298b3722776ef29640ef1fc9ad5c1 448 Pfam PF01266 FAD dependent oxidoreductase 38 402 4.5E-29 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS19350 fd2298b3722776ef29640ef1fc9ad5c1 448 Gene3D G3DSA:3.50.50.60 365 414 3.9E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19350 fd2298b3722776ef29640ef1fc9ad5c1 448 Gene3D G3DSA:3.50.50.60 32 129 3.9E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19350 fd2298b3722776ef29640ef1fc9ad5c1 448 Gene3D G3DSA:3.50.50.60 183 262 3.9E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19350 fd2298b3722776ef29640ef1fc9ad5c1 448 SUPERFAMILY SSF51905 365 410 8.2E-27 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19350 fd2298b3722776ef29640ef1fc9ad5c1 448 SUPERFAMILY SSF51905 37 263 8.2E-27 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS13775 8c69f6511e8318c5de9f0b36b434a799 74 Pfam PF06004 Bacterial protein of unknown function (DUF903) 25 71 1.3E-13 T 13-09-2016 IPR010305 Protein of unknown function DUF903 PMA3_RS13775 8c69f6511e8318c5de9f0b36b434a799 74 PANTHER PTHR37011 2 74 6.1E-13 T 13-09-2016 PMA3_RS13775 8c69f6511e8318c5de9f0b36b434a799 74 Gene3D G3DSA:2.30.30.100 21 73 1.4E-14 T 13-09-2016 PMA3_RS13775 8c69f6511e8318c5de9f0b36b434a799 74 SUPERFAMILY SSF50182 22 72 8.18E-12 T 13-09-2016 IPR010920 LSM domain PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 Pfam PF13476 AAA domain 6 254 4.1E-30 T 13-09-2016 PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 Gene3D G3DSA:3.40.50.300 1114 1200 4.7E-12 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 Gene3D G3DSA:3.40.50.300 1 178 1.5E-22 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 SUPERFAMILY SSF52540 1 58 3.96E-9 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 SUPERFAMILY SSF52540 462 579 3.96E-9 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 PANTHER PTHR32114 804 1213 3.0E-123 T 13-09-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 PANTHER PTHR32114 2 736 3.0E-123 T 13-09-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 PANTHER PTHR32114:SF2 804 1213 3.0E-123 T 13-09-2016 PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 PANTHER PTHR32114:SF2 2 736 3.0E-123 T 13-09-2016 PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1112 1172 4.8E-12 T 13-09-2016 PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 SUPERFAMILY SSF52540 810 855 9.0E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 SUPERFAMILY SSF52540 1 197 9.0E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 SUPERFAMILY SSF52540 1062 1206 9.0E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS15210 ce22b02b1d96bf57cefaa1f5bf4435c4 1213 SUPERFAMILY SSF52540 230 266 9.0E-30 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26235 36a057ddf45cd0f2fd081069c453d175 258 PANTHER PTHR31360:SF3 25 250 5.6E-114 T 13-09-2016 PMA3_RS26235 36a057ddf45cd0f2fd081069c453d175 258 Pfam PF06884 Protein of unknown function (DUF1264) 64 228 3.8E-71 T 13-09-2016 IPR010686 Protein of unknown function DUF1264 PMA3_RS26235 36a057ddf45cd0f2fd081069c453d175 258 PANTHER PTHR31360 25 250 5.6E-114 T 13-09-2016 PMA3_RS23510 f50fe6b68494a1f3a6955ff63cd96c8f 351 Pfam PF08402 TOBE domain 275 349 1.7E-8 T 13-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PMA3_RS23510 f50fe6b68494a1f3a6955ff63cd96c8f 351 SMART SM00382 28 211 2.6E-20 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS23510 f50fe6b68494a1f3a6955ff63cd96c8f 351 PANTHER PTHR24220:SF150 5 243 2.9E-126 T 13-09-2016 PMA3_RS23510 f50fe6b68494a1f3a6955ff63cd96c8f 351 SUPERFAMILY SSF52540 4 242 3.77E-86 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23510 f50fe6b68494a1f3a6955ff63cd96c8f 351 SUPERFAMILY SSF50331 238 349 8.32E-15 T 13-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal PMA3_RS23510 f50fe6b68494a1f3a6955ff63cd96c8f 351 PANTHER PTHR24220 5 243 2.9E-126 T 13-09-2016 PMA3_RS23510 f50fe6b68494a1f3a6955ff63cd96c8f 351 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS23510 f50fe6b68494a1f3a6955ff63cd96c8f 351 Gene3D G3DSA:3.40.50.300 5 234 7.6E-81 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS23510 f50fe6b68494a1f3a6955ff63cd96c8f 351 Pfam PF00005 ABC transporter 19 161 7.4E-38 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS27675 a9d012d5be98c4f69908b05d92d9cee1 102 Pfam PF11275 Protein of unknown function (DUF3077) 14 88 2.3E-27 T 13-09-2016 IPR021427 Protein of unknown function DUF3077 PMA3_RS12475 c52e3d783d114d702834105b96bb0088 235 Gene3D G3DSA:3.40.50.2020 106 211 6.4E-38 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS12475 c52e3d783d114d702834105b96bb0088 235 Gene3D G3DSA:3.40.50.2020 9 70 6.4E-38 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS12475 c52e3d783d114d702834105b96bb0088 235 PANTHER PTHR31299 9 218 1.3E-81 T 13-09-2016 PMA3_RS12475 c52e3d783d114d702834105b96bb0088 235 Pfam PF00156 Phosphoribosyl transferase domain 15 192 6.0E-23 T 13-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PMA3_RS12475 c52e3d783d114d702834105b96bb0088 235 SUPERFAMILY SSF53271 11 218 1.3E-49 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS04515 c672b00d0472d6cbb00323ba8a1e3471 399 PANTHER PTHR24023 75 386 6.7E-28 T 13-09-2016 PMA3_RS04515 c672b00d0472d6cbb00323ba8a1e3471 399 Gene3D G3DSA:3.30.1540.10 226 308 4.0E-21 T 13-09-2016 PMA3_RS04515 c672b00d0472d6cbb00323ba8a1e3471 399 SUPERFAMILY SSF89796 6 399 2.75E-130 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS04515 c672b00d0472d6cbb00323ba8a1e3471 399 PANTHER PTHR24023:SF593 75 386 6.7E-28 T 13-09-2016 PMA3_RS04515 c672b00d0472d6cbb00323ba8a1e3471 399 Gene3D G3DSA:3.40.50.10540 5 219 2.3E-106 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS04515 c672b00d0472d6cbb00323ba8a1e3471 399 Gene3D G3DSA:3.40.50.10540 309 399 2.3E-106 T 13-09-2016 IPR023606 CoA-transferase family III domain PMA3_RS04515 c672b00d0472d6cbb00323ba8a1e3471 399 Pfam PF02515 CoA-transferase family III 8 376 1.3E-114 T 13-09-2016 IPR003673 CoA-transferase family III GO:0003824 PMA3_RS16100 b2b8405f342611eee8bc11981ee93eec 115 PANTHER PTHR41878:SF1 53 107 3.1E-14 T 13-09-2016 PMA3_RS16100 b2b8405f342611eee8bc11981ee93eec 115 SUPERFAMILY SSF159941 45 107 5.23E-18 T 13-09-2016 IPR024047 Protein MM3350-like domain PMA3_RS16100 b2b8405f342611eee8bc11981ee93eec 115 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 32 104 8.6E-19 T 13-09-2016 IPR012912 Plasmid pRiA4b, Orf3 PMA3_RS16100 b2b8405f342611eee8bc11981ee93eec 115 Gene3D G3DSA:3.10.290.30 44 108 2.3E-16 T 13-09-2016 IPR024047 Protein MM3350-like domain PMA3_RS16100 b2b8405f342611eee8bc11981ee93eec 115 PANTHER PTHR41878 53 107 3.1E-14 T 13-09-2016 PMA3_RS16930 0708430f6c8b95ef897deb3b2d88dfb8 402 Gene3D G3DSA:3.40.1090.10 84 269 1.0E-9 T 13-09-2016 PMA3_RS16930 0708430f6c8b95ef897deb3b2d88dfb8 402 SUPERFAMILY SSF52151 84 269 4.71E-25 T 13-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PMA3_RS16930 0708430f6c8b95ef897deb3b2d88dfb8 402 Pfam PF01734 Patatin-like phospholipase 85 268 2.6E-14 T 13-09-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PMA3_RS14130 cd6c17396dac2ab11f591cbbfdbaf531 344 Gene3D G3DSA:1.10.10.60 279 332 1.1E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14130 cd6c17396dac2ab11f591cbbfdbaf531 344 PANTHER PTHR11019 198 335 4.3E-21 T 13-09-2016 PMA3_RS14130 cd6c17396dac2ab11f591cbbfdbaf531 344 SUPERFAMILY SSF46689 280 330 2.51E-11 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS14130 cd6c17396dac2ab11f591cbbfdbaf531 344 PANTHER PTHR11019:SF52 198 335 4.3E-21 T 13-09-2016 PMA3_RS14130 cd6c17396dac2ab11f591cbbfdbaf531 344 SMART SM00342 245 327 5.9E-21 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS14130 cd6c17396dac2ab11f591cbbfdbaf531 344 Pfam PF12833 Helix-turn-helix domain 251 328 4.6E-19 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS14130 cd6c17396dac2ab11f591cbbfdbaf531 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 203 2.3E-35 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS01290 4e3c9152bed036a5c13ccb1b6c42e9c0 507 Gene3D G3DSA:1.20.200.10 198 501 4.1E-112 T 13-09-2016 PMA3_RS01290 4e3c9152bed036a5c13ccb1b6c42e9c0 507 SUPERFAMILY SSF48557 5 500 1.1E-167 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS01290 4e3c9152bed036a5c13ccb1b6c42e9c0 507 Pfam PF00221 Aromatic amino acid lyase 14 471 5.6E-165 T 13-09-2016 IPR001106 Aromatic amino acid lyase PMA3_RS01290 4e3c9152bed036a5c13ccb1b6c42e9c0 507 PANTHER PTHR10362 5 498 6.8E-199 T 13-09-2016 PMA3_RS01290 4e3c9152bed036a5c13ccb1b6c42e9c0 507 Gene3D G3DSA:1.10.275.10 7 197 5.7E-60 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS01290 4e3c9152bed036a5c13ccb1b6c42e9c0 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 8 499 1.1E-163 T 13-09-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PMA3_RS01290 4e3c9152bed036a5c13ccb1b6c42e9c0 507 PANTHER PTHR10362:SF7 5 498 6.8E-199 T 13-09-2016 PMA3_RS15365 917004cfda7f55d75190cea4a4f336f7 204 PRINTS PR01754 Streptothricin acetyltransferase signature 173 186 3.8E-15 T 13-09-2016 IPR008125 Streptothricin acetyltransferase PMA3_RS15365 917004cfda7f55d75190cea4a4f336f7 204 PRINTS PR01754 Streptothricin acetyltransferase signature 129 144 3.8E-15 T 13-09-2016 IPR008125 Streptothricin acetyltransferase PMA3_RS15365 917004cfda7f55d75190cea4a4f336f7 204 PRINTS PR01754 Streptothricin acetyltransferase signature 150 166 3.8E-15 T 13-09-2016 IPR008125 Streptothricin acetyltransferase PMA3_RS15365 917004cfda7f55d75190cea4a4f336f7 204 PRINTS PR01754 Streptothricin acetyltransferase signature 105 120 3.8E-15 T 13-09-2016 IPR008125 Streptothricin acetyltransferase PMA3_RS15365 917004cfda7f55d75190cea4a4f336f7 204 SUPERFAMILY SSF55729 61 172 4.71E-23 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS15365 917004cfda7f55d75190cea4a4f336f7 204 PANTHER PTHR23091 64 164 5.2E-21 T 13-09-2016 PMA3_RS15365 917004cfda7f55d75190cea4a4f336f7 204 Gene3D G3DSA:3.40.630.30 65 178 1.9E-24 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS15365 917004cfda7f55d75190cea4a4f336f7 204 Pfam PF00583 Acetyltransferase (GNAT) family 82 158 3.2E-16 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS01270 33e5647b1befed55c09ec332a7ccb1fa 490 PIRSF PIRSF002744 2 465 4.8E-100 T 13-09-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PMA3_RS01270 33e5647b1befed55c09ec332a7ccb1fa 490 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 21 443 6.0E-54 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS01270 33e5647b1befed55c09ec332a7ccb1fa 490 PANTHER PTHR31806 1 453 9.7E-128 T 13-09-2016 PMA3_RS22630 3682177147dd23f3483e6f65c4f02b19 241 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 12 240 6.6E-99 T 13-09-2016 IPR017792 Urea carboxylase-associated protein 2 PMA3_RS22630 3682177147dd23f3483e6f65c4f02b19 241 PANTHER PTHR31527:SF0 13 240 2.7E-22 T 13-09-2016 PMA3_RS22630 3682177147dd23f3483e6f65c4f02b19 241 PANTHER PTHR31527 13 240 2.7E-22 T 13-09-2016 PMA3_RS22630 3682177147dd23f3483e6f65c4f02b19 241 Pfam PF09347 Domain of unknown function (DUF1989) 15 186 2.4E-50 T 13-09-2016 IPR018959 Domain of unknown function DUF1989 PMA3_RS17945 26c75e1e1e462d893af671d25dc48beb 339 Gene3D G3DSA:1.10.10.60 284 333 6.8E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17945 26c75e1e1e462d893af671d25dc48beb 339 SUPERFAMILY SSF46689 284 333 2.56E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS17945 26c75e1e1e462d893af671d25dc48beb 339 Pfam PF12833 Helix-turn-helix domain 255 332 1.6E-15 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17945 26c75e1e1e462d893af671d25dc48beb 339 PANTHER PTHR11019:SF52 234 339 2.6E-22 T 13-09-2016 PMA3_RS17945 26c75e1e1e462d893af671d25dc48beb 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 204 1.7E-46 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS17945 26c75e1e1e462d893af671d25dc48beb 339 SMART SM00342 249 331 8.9E-23 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS17945 26c75e1e1e462d893af671d25dc48beb 339 PANTHER PTHR11019 234 339 2.6E-22 T 13-09-2016 PMA3_RS23435 6d66e9fb9a65289f0ce0915be86a1c2a 443 SUPERFAMILY SSF53300 240 370 7.78E-7 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS23435 6d66e9fb9a65289f0ce0915be86a1c2a 443 PANTHER PTHR33608 2 443 1.4E-143 T 13-09-2016 PMA3_RS23435 6d66e9fb9a65289f0ce0915be86a1c2a 443 Pfam PF01882 Protein of unknown function DUF58 199 284 3.8E-24 T 13-09-2016 IPR002881 Domain of unknown function DUF58 PMA3_RS23435 6d66e9fb9a65289f0ce0915be86a1c2a 443 PANTHER PTHR33608:SF3 2 443 1.4E-143 T 13-09-2016 PMA3_RS21910 a14429bcc8edf2ca942605d7e2356acd 99 PANTHER PTHR33606 1 98 4.9E-31 T 13-09-2016 PMA3_RS21910 a14429bcc8edf2ca942605d7e2356acd 99 Pfam PF03795 YCII-related domain 1 95 1.0E-27 T 13-09-2016 IPR005545 YCII-related PMA3_RS21910 a14429bcc8edf2ca942605d7e2356acd 99 SUPERFAMILY SSF54909 1 97 1.3E-30 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS21910 a14429bcc8edf2ca942605d7e2356acd 99 Gene3D G3DSA:3.30.70.1060 1 98 3.8E-35 T 13-09-2016 PMA3_RS13120 89dda3ea0466fe731c43e318d77ca01e 346 Gene3D G3DSA:3.30.1370.60 85 287 6.4E-80 T 13-09-2016 PMA3_RS13120 89dda3ea0466fe731c43e318d77ca01e 346 Pfam PF02615 Malate/L-lactate dehydrogenase 17 340 2.7E-107 T 13-09-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS13120 89dda3ea0466fe731c43e318d77ca01e 346 Gene3D G3DSA:1.10.1530.10 16 84 6.0E-23 T 13-09-2016 PMA3_RS13120 89dda3ea0466fe731c43e318d77ca01e 346 PANTHER PTHR11091 16 344 5.2E-84 T 13-09-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS13120 89dda3ea0466fe731c43e318d77ca01e 346 SUPERFAMILY SSF89733 16 344 9.94E-104 T 13-09-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 Gene3D G3DSA:3.30.870.10 330 391 5.1E-11 T 13-09-2016 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 Gene3D G3DSA:3.30.870.10 38 103 1.0E-19 T 13-09-2016 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 Gene3D G3DSA:3.30.870.10 158 304 1.0E-19 T 13-09-2016 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 Gene3D G3DSA:3.30.870.10 455 547 5.1E-11 T 13-09-2016 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 SUPERFAMILY SSF56024 175 299 1.92E-23 T 13-09-2016 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 SUPERFAMILY SSF56024 19 112 1.92E-23 T 13-09-2016 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 PANTHER PTHR18896:SF80 192 357 1.4E-58 T 13-09-2016 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 PANTHER PTHR18896:SF80 398 584 1.4E-58 T 13-09-2016 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 PANTHER PTHR18896:SF80 39 141 1.4E-58 T 13-09-2016 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 PANTHER PTHR18896 398 584 1.4E-58 T 13-09-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 PANTHER PTHR18896 39 141 1.4E-58 T 13-09-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 PANTHER PTHR18896 192 357 1.4E-58 T 13-09-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 SUPERFAMILY SSF56024 325 400 7.5E-16 T 13-09-2016 PMA3_RS08405 052f7fbb9876215f20bba34bf94129a9 604 SUPERFAMILY SSF56024 468 553 7.5E-16 T 13-09-2016 PMA3_RS01655 4785fc3f9fa8797ed532f1942d62780d 559 SUPERFAMILY SSF56801 24 441 1.7E-55 T 13-09-2016 PMA3_RS01655 4785fc3f9fa8797ed532f1942d62780d 559 Pfam PF00501 AMP-binding enzyme 117 278 5.2E-11 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS01655 4785fc3f9fa8797ed532f1942d62780d 559 Gene3D G3DSA:3.40.50.980 24 136 1.4E-8 T 13-09-2016 PMA3_RS01655 4785fc3f9fa8797ed532f1942d62780d 559 Gene3D G3DSA:3.40.50.980 137 275 7.6E-13 T 13-09-2016 PMA3_RS01655 4785fc3f9fa8797ed532f1942d62780d 559 Gene3D G3DSA:3.10.129.10 454 547 7.2E-18 T 13-09-2016 IPR029069 HotDog domain PMA3_RS01655 4785fc3f9fa8797ed532f1942d62780d 559 PANTHER PTHR24095:SF163 78 458 6.2E-17 T 13-09-2016 PMA3_RS01655 4785fc3f9fa8797ed532f1942d62780d 559 SUPERFAMILY SSF54637 451 555 5.97E-19 T 13-09-2016 IPR029069 HotDog domain PMA3_RS01655 4785fc3f9fa8797ed532f1942d62780d 559 Gene3D G3DSA:3.30.300.30 336 438 1.2E-10 T 13-09-2016 PMA3_RS01655 4785fc3f9fa8797ed532f1942d62780d 559 PANTHER PTHR24095 78 458 6.2E-17 T 13-09-2016 PMA3_RS01655 4785fc3f9fa8797ed532f1942d62780d 559 Pfam PF07977 FabA-like domain 462 528 1.0E-6 T 13-09-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PMA3_RS17130 7a83b463396cf72fcb60b1401cc6a327 168 SUPERFAMILY SSF55068 3 162 1.7E-66 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS17130 7a83b463396cf72fcb60b1401cc6a327 168 Gene3D G3DSA:3.30.1060.10 3 155 1.4E-67 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS17130 7a83b463396cf72fcb60b1401cc6a327 168 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 154 2.3E-53 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS17130 7a83b463396cf72fcb60b1401cc6a327 168 PANTHER PTHR10173 5 154 3.6E-70 T 13-09-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PMA3_RS17130 7a83b463396cf72fcb60b1401cc6a327 168 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 160 34.093 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS17130 7a83b463396cf72fcb60b1401cc6a327 168 PANTHER PTHR10173:SF6 5 154 3.6E-70 T 13-09-2016 PMA3_RS17130 7a83b463396cf72fcb60b1401cc6a327 168 Pfam PF01625 Peptide methionine sulfoxide reductase 7 154 4.1E-58 T 13-09-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PMA3_RS28820 87448e1f7523d7aebf46bcef41e497d7 195 PANTHER PTHR18966 17 126 1.9E-20 T 13-09-2016 PMA3_RS28820 87448e1f7523d7aebf46bcef41e497d7 195 Gene3D G3DSA:3.40.190.10 28 189 9.5E-35 T 13-09-2016 PMA3_RS28820 87448e1f7523d7aebf46bcef41e497d7 195 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 53 66 - T 13-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PMA3_RS28820 87448e1f7523d7aebf46bcef41e497d7 195 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 147 186 1.4E-6 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS28820 87448e1f7523d7aebf46bcef41e497d7 195 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 136 2.1E-26 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS28820 87448e1f7523d7aebf46bcef41e497d7 195 PANTHER PTHR18966:SF191 17 126 1.9E-20 T 13-09-2016 PMA3_RS28820 87448e1f7523d7aebf46bcef41e497d7 195 SMART SM00062 31 188 4.5E-11 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS28820 87448e1f7523d7aebf46bcef41e497d7 195 SUPERFAMILY SSF53850 3 187 4.35E-37 T 13-09-2016 PMA3_RS04305 bf5bee601603e24a70700cafa0a801d6 106 Pfam PF01541 GIY-YIG catalytic domain 22 91 3.5E-12 T 13-09-2016 IPR000305 GIY-YIG nuclease superfamily PMA3_RS04305 bf5bee601603e24a70700cafa0a801d6 106 SUPERFAMILY SSF82771 21 91 1.31E-11 T 13-09-2016 IPR000305 GIY-YIG nuclease superfamily PMA3_RS04305 bf5bee601603e24a70700cafa0a801d6 106 PANTHER PTHR34477:SF1 15 97 2.8E-30 T 13-09-2016 PMA3_RS04305 bf5bee601603e24a70700cafa0a801d6 106 PANTHER PTHR34477 15 97 2.8E-30 T 13-09-2016 PMA3_RS25845 783819d40ea01fefc7512d4ebf37ba5f 104 PANTHER PTHR33336 6 95 1.5E-20 T 13-09-2016 PMA3_RS25845 783819d40ea01fefc7512d4ebf37ba5f 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 11 79 9.0E-21 T 13-09-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PMA3_RS25845 783819d40ea01fefc7512d4ebf37ba5f 104 Gene3D G3DSA:3.30.70.900 8 99 9.9E-30 T 13-09-2016 PMA3_RS25845 783819d40ea01fefc7512d4ebf37ba5f 104 SUPERFAMILY SSF54909 5 87 6.13E-28 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS21870 f4a95d8cbcf8d9414fd26a925896864a 472 PIRSF PIRSF006060 1 468 1.3E-75 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS21870 f4a95d8cbcf8d9414fd26a925896864a 472 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 13-09-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PMA3_RS21870 f4a95d8cbcf8d9414fd26a925896864a 472 PANTHER PTHR11785 1 459 1.2E-298 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS21870 f4a95d8cbcf8d9414fd26a925896864a 472 PANTHER PTHR11785:SF26 1 459 1.2E-298 T 13-09-2016 PMA3_RS21870 f4a95d8cbcf8d9414fd26a925896864a 472 Pfam PF00324 Amino acid permease 19 464 9.9E-117 T 13-09-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PMA3_RS17885 f19780a972e56e967a4b811c71354bad 149 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 29 146 8.9E-22 T 13-09-2016 IPR011979 Conserved hypothetical protein CHP02293 PMA3_RS17885 f19780a972e56e967a4b811c71354bad 149 Pfam PF09722 Protein of unknown function (DUF2384) 97 146 6.1E-15 T 13-09-2016 IPR024467 Domain of unknown function DUF2384 PMA3_RS18335 76791524850f2369821dafa1c1986df6 210 PANTHER PTHR35011 1 38 1.3E-68 T 13-09-2016 PMA3_RS18335 76791524850f2369821dafa1c1986df6 210 PANTHER PTHR35011:SF1 66 205 1.3E-68 T 13-09-2016 PMA3_RS18335 76791524850f2369821dafa1c1986df6 210 PANTHER PTHR35011:SF1 1 38 1.3E-68 T 13-09-2016 PMA3_RS18335 76791524850f2369821dafa1c1986df6 210 PANTHER PTHR35011 66 205 1.3E-68 T 13-09-2016 PMA3_RS18335 76791524850f2369821dafa1c1986df6 210 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 65 184 3.9E-20 T 13-09-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PMA3_RS19570 74f79b8de196e7f61cdee4bdf6e66f86 207 PANTHER PTHR35869 1 207 1.5E-50 T 13-09-2016 PMA3_RS19570 74f79b8de196e7f61cdee4bdf6e66f86 207 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 35 197 3.0E-54 T 13-09-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PMA3_RS19570 74f79b8de196e7f61cdee4bdf6e66f86 207 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 10 207 29.812 T 13-09-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 PMA3_RS19570 74f79b8de196e7f61cdee4bdf6e66f86 207 SUPERFAMILY SSF89392 26 206 6.67E-50 T 13-09-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX PMA3_RS19570 74f79b8de196e7f61cdee4bdf6e66f86 207 Gene3D G3DSA:2.50.20.10 26 206 6.3E-56 T 13-09-2016 PMA3_RS19570 74f79b8de196e7f61cdee4bdf6e66f86 207 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 204 9.9E-26 T 13-09-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 PMA3_RS12320 87f5bffe91f07b9294d0f06fa26644a6 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 217 5.2E-23 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12320 87f5bffe91f07b9294d0f06fa26644a6 220 PANTHER PTHR30614 18 220 5.0E-63 T 13-09-2016 PMA3_RS12320 87f5bffe91f07b9294d0f06fa26644a6 220 SUPERFAMILY SSF161098 16 209 2.88E-42 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12320 87f5bffe91f07b9294d0f06fa26644a6 220 Gene3D G3DSA:1.10.3720.10 16 217 5.3E-44 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS12320 87f5bffe91f07b9294d0f06fa26644a6 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 112 4.0E-24 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS15625 1df58d0e3155eaaa0dc77b0fe36c5d09 426 PANTHER PTHR33362:SF2 1 424 4.3E-211 T 13-09-2016 PMA3_RS15625 1df58d0e3155eaaa0dc77b0fe36c5d09 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 3.6E-112 T 13-09-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PMA3_RS15625 1df58d0e3155eaaa0dc77b0fe36c5d09 426 PIRSF PIRSF006066 1 426 1.0E-168 T 13-09-2016 IPR004681 TRAP transporter permease protein GO:0016021 PMA3_RS15625 1df58d0e3155eaaa0dc77b0fe36c5d09 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 9.8E-128 T 13-09-2016 IPR004681 TRAP transporter permease protein GO:0016021 PMA3_RS15625 1df58d0e3155eaaa0dc77b0fe36c5d09 426 PANTHER PTHR33362 1 424 4.3E-211 T 13-09-2016 PMA3_RS05370 7d4334f79cf8b926df437c85544803ec 491 PANTHER PTHR11101 2 487 1.9E-191 T 13-09-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PMA3_RS05370 7d4334f79cf8b926df437c85544803ec 491 PANTHER PTHR11101:SF59 2 487 1.9E-191 T 13-09-2016 PMA3_RS05370 7d4334f79cf8b926df437c85544803ec 491 Pfam PF01384 Phosphate transporter family 30 478 9.2E-82 T 13-09-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PMA3_RS16410 1a7ddd970be9b9c4d4d693b49230fd87 447 SMART SM00729 52 270 0.0034 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS16410 1a7ddd970be9b9c4d4d693b49230fd87 447 Pfam PF06969 HemN C-terminal domain 365 428 3.5E-7 T 13-09-2016 IPR010723 HemN, C-terminal PMA3_RS16410 1a7ddd970be9b9c4d4d693b49230fd87 447 Gene3D G3DSA:3.80.30.20 81 241 4.4E-6 T 13-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe PMA3_RS16410 1a7ddd970be9b9c4d4d693b49230fd87 447 PIRSF PIRSF000167 24 446 3.7E-98 T 13-09-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 PMA3_RS16410 1a7ddd970be9b9c4d4d693b49230fd87 447 PANTHER PTHR13932 80 438 1.0E-89 T 13-09-2016 PMA3_RS16410 1a7ddd970be9b9c4d4d693b49230fd87 447 PANTHER PTHR13932:SF6 80 438 1.0E-89 T 13-09-2016 PMA3_RS16410 1a7ddd970be9b9c4d4d693b49230fd87 447 SUPERFAMILY SSF102114 67 438 4.71E-66 T 13-09-2016 PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 Pfam PF00376 MerR family regulatory protein 4 40 2.3E-14 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 SUPERFAMILY SSF46955 3 129 1.5E-34 T 13-09-2016 IPR009061 Putative DNA-binding domain PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 SMART SM00422 2 71 1.5E-28 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 Gene3D G3DSA:1.10.1660.10 1 56 4.8E-26 T 13-09-2016 PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.6E-11 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.6E-11 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.6E-11 T 13-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 Pfam PF09278 MerR, DNA binding 45 108 5.6E-19 T 13-09-2016 IPR015358 Transcription regulator MerR, DNA binding PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 PANTHER PTHR30204:SF18 1 113 2.4E-38 T 13-09-2016 PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 PANTHER PTHR30204 1 113 2.4E-38 T 13-09-2016 PMA3_RS06380 5c7cec5e3b265bf8488283f0644abdf9 144 Gene3D G3DSA:1.10.1660.10 57 134 8.3E-26 T 13-09-2016 PMA3_RS00970 c233fee6e30d8221ceb807ba3173ef43 218 PANTHER PTHR13887 2 218 2.8E-51 T 13-09-2016 PMA3_RS00970 c233fee6e30d8221ceb807ba3173ef43 218 Gene3D G3DSA:3.40.30.10 4 210 2.7E-48 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS00970 c233fee6e30d8221ceb807ba3173ef43 218 Pfam PF01323 DSBA-like thioredoxin domain 7 208 9.8E-36 T 13-09-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PMA3_RS00970 c233fee6e30d8221ceb807ba3173ef43 218 PANTHER PTHR13887:SF10 2 218 2.8E-51 T 13-09-2016 PMA3_RS00970 c233fee6e30d8221ceb807ba3173ef43 218 SUPERFAMILY SSF52833 5 212 7.0E-49 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS15250 a65c6b7941647c1ebc7021c2d6fc63d4 330 SUPERFAMILY SSF56529 111 315 4.12E-26 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS15250 a65c6b7941647c1ebc7021c2d6fc63d4 330 Gene3D G3DSA:3.90.850.10 134 308 3.2E-6 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS15250 a65c6b7941647c1ebc7021c2d6fc63d4 330 PIRSF PIRSF033905 1 328 1.6E-167 T 13-09-2016 IPR009645 Uncharacterised conserved protein GguC PMA3_RS00205 abbfef6870d446c6999e75952b53fff9 108 Pfam PF05957 Bacterial protein of unknown function (DUF883) 13 106 2.7E-23 T 13-09-2016 IPR010279 Protein of unknown function DUF883, ElaB PMA3_RS14570 25b171982dd8acb77c8ecac5d8745e4b 175 SUPERFAMILY SSF52833 8 170 1.44E-38 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS14570 25b171982dd8acb77c8ecac5d8745e4b 175 Gene3D G3DSA:3.40.30.10 8 170 4.3E-37 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS14570 25b171982dd8acb77c8ecac5d8745e4b 175 Pfam PF13462 Thioredoxin 12 170 4.8E-27 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS14570 25b171982dd8acb77c8ecac5d8745e4b 175 PANTHER PTHR13887 11 171 2.3E-30 T 13-09-2016 PMA3_RS01260 8d8f8f6c9485ec9874ac61d5346987d6 189 PANTHER PTHR37943 2 181 2.1E-51 T 13-09-2016 PMA3_RS01260 8d8f8f6c9485ec9874ac61d5346987d6 189 PANTHER PTHR37943:SF1 2 181 2.1E-51 T 13-09-2016 PMA3_RS01260 8d8f8f6c9485ec9874ac61d5346987d6 189 Gene3D G3DSA:2.60.120.10 10 106 8.6E-39 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS01260 8d8f8f6c9485ec9874ac61d5346987d6 189 Gene3D G3DSA:2.60.120.10 107 189 2.9E-40 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS01260 8d8f8f6c9485ec9874ac61d5346987d6 189 SUPERFAMILY SSF51182 4 184 5.63E-59 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS01260 8d8f8f6c9485ec9874ac61d5346987d6 189 Pfam PF05962 HutD 10 182 3.4E-56 T 13-09-2016 IPR010282 Uncharacterised protein family HutD/Ves PMA3_RS18795 a3a28be78ecb5ed7a456bda9c410a30b 303 Gene3D G3DSA:3.60.130.10 2 281 3.3E-85 T 13-09-2016 PMA3_RS18795 a3a28be78ecb5ed7a456bda9c410a30b 303 PANTHER PTHR30468:SF5 1 281 3.2E-133 T 13-09-2016 PMA3_RS18795 a3a28be78ecb5ed7a456bda9c410a30b 303 PANTHER PTHR30468 1 281 3.2E-133 T 13-09-2016 PMA3_RS18795 a3a28be78ecb5ed7a456bda9c410a30b 303 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 5 266 2.9E-56 T 13-09-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PMA3_RS18795 a3a28be78ecb5ed7a456bda9c410a30b 303 SUPERFAMILY SSF51197 3 273 8.24E-85 T 13-09-2016 PMA3_RS02200 b4e27f77cbbff2b9ac59bbdb98f28712 148 PANTHER PTHR38439 4 148 9.5E-49 T 13-09-2016 PMA3_RS02200 b4e27f77cbbff2b9ac59bbdb98f28712 148 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 148 2.4E-30 T 13-09-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 PMA3_RS02200 b4e27f77cbbff2b9ac59bbdb98f28712 148 PANTHER PTHR38439:SF2 4 148 9.5E-49 T 13-09-2016 PMA3_RS02200 b4e27f77cbbff2b9ac59bbdb98f28712 148 Gene3D G3DSA:2.60.40.420 22 148 1.7E-54 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS02200 b4e27f77cbbff2b9ac59bbdb98f28712 148 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 125 141 - T 13-09-2016 IPR028871 Blue (type 1) copper protein, binding site PMA3_RS02200 b4e27f77cbbff2b9ac59bbdb98f28712 148 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 146 2.0E-60 T 13-09-2016 PMA3_RS02200 b4e27f77cbbff2b9ac59bbdb98f28712 148 SUPERFAMILY SSF49503 21 148 4.71E-46 T 13-09-2016 IPR008972 Cupredoxin PMA3_RS02200 b4e27f77cbbff2b9ac59bbdb98f28712 148 TIGRFAM TIGR02695 azurin: azurin 23 147 2.2E-60 T 13-09-2016 IPR014068 Azurin, proteobacteria PMA3_RS17135 616751a16848ca3b2ccd3d47a6120697 332 PANTHER PTHR18640:SF9 3 325 3.1E-105 T 13-09-2016 PMA3_RS17135 616751a16848ca3b2ccd3d47a6120697 332 PIRSF PIRSF026166 1 329 2.0E-133 T 13-09-2016 IPR016833 Putative sodium bile acid cotransporter PMA3_RS17135 616751a16848ca3b2ccd3d47a6120697 332 PANTHER PTHR18640 3 325 3.1E-105 T 13-09-2016 IPR016833 Putative sodium bile acid cotransporter PMA3_RS17135 616751a16848ca3b2ccd3d47a6120697 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 9 317 5.6E-98 T 13-09-2016 IPR016833 Putative sodium bile acid cotransporter PMA3_RS05325 b2bc02a7543c67700691348adabb42dd 307 PANTHER PTHR11795 3 307 5.5E-141 T 13-09-2016 PMA3_RS05325 b2bc02a7543c67700691348adabb42dd 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 291 6.1E-57 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS05325 b2bc02a7543c67700691348adabb42dd 307 PANTHER PTHR11795:SF371 3 307 5.5E-141 T 13-09-2016 PMA3_RS25200 80058c3e4080aa3d9c240a337c051b56 365 PANTHER PTHR34138 1 334 9.1E-77 T 13-09-2016 PMA3_RS25200 80058c3e4080aa3d9c240a337c051b56 365 Pfam PF04085 rod shape-determining protein MreC 112 256 5.0E-35 T 13-09-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PMA3_RS25200 80058c3e4080aa3d9c240a337c051b56 365 PANTHER PTHR34138:SF1 1 334 9.1E-77 T 13-09-2016 PMA3_RS25200 80058c3e4080aa3d9c240a337c051b56 365 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 264 3.6E-65 T 13-09-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PMA3_RS06095 401573cc4579c98fbd619304b7ee2575 212 PANTHER PTHR30086 4 212 1.0E-48 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS06095 401573cc4579c98fbd619304b7ee2575 212 Pfam PF01810 LysE type translocator 19 210 8.8E-33 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS06095 401573cc4579c98fbd619304b7ee2575 212 PIRSF PIRSF006324 4 212 1.9E-46 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS03415 622ae0e62a20e308d5767aa7255452aa 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.2E-10 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS03415 622ae0e62a20e308d5767aa7255452aa 137 PANTHER PTHR30093 1 51 2.9E-15 T 13-09-2016 PMA3_RS03415 622ae0e62a20e308d5767aa7255452aa 137 Pfam PF00114 Pilin (bacterial filament) 35 134 8.5E-22 T 13-09-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 PMA3_RS03415 622ae0e62a20e308d5767aa7255452aa 137 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 1.7E-11 T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS03415 622ae0e62a20e308d5767aa7255452aa 137 Gene3D G3DSA:3.30.700.10 7 133 2.6E-26 T 13-09-2016 PMA3_RS03415 622ae0e62a20e308d5767aa7255452aa 137 SUPERFAMILY SSF54523 7 134 1.26E-25 T 13-09-2016 PMA3_RS03415 622ae0e62a20e308d5767aa7255452aa 137 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-09-2016 IPR012902 Prokaryotic N-terminal methylation site PMA3_RS12060 45681ad908e14ae6076d75723c25f5c3 205 Gene3D G3DSA:3.40.50.300 49 160 4.1E-43 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12060 45681ad908e14ae6076d75723c25f5c3 205 PIRSF PIRSF037290 4 204 2.5E-75 T 13-09-2016 IPR017166 Uncharacterised conserved protein UCP037290 PMA3_RS12060 45681ad908e14ae6076d75723c25f5c3 205 PANTHER PTHR35369:SF1 1 199 5.2E-81 T 13-09-2016 PMA3_RS12060 45681ad908e14ae6076d75723c25f5c3 205 SUPERFAMILY SSF52540 49 160 6.05E-35 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12060 45681ad908e14ae6076d75723c25f5c3 205 PANTHER PTHR35369 1 199 5.2E-81 T 13-09-2016 PMA3_RS19475 6f7ca07b858bcac80ef605d488694d43 190 Pfam PF00857 Isochorismatase family 3 144 7.6E-33 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS19475 6f7ca07b858bcac80ef605d488694d43 190 PANTHER PTHR11080 1 190 2.9E-35 T 13-09-2016 PMA3_RS19475 6f7ca07b858bcac80ef605d488694d43 190 Gene3D G3DSA:3.40.50.850 1 175 4.1E-42 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS19475 6f7ca07b858bcac80ef605d488694d43 190 SUPERFAMILY SSF52499 2 161 1.09E-44 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS19475 6f7ca07b858bcac80ef605d488694d43 190 PANTHER PTHR11080:SF13 1 190 2.9E-35 T 13-09-2016 PMA3_RS03595 76c962034c57b8e57dac81679382c53a 284 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 48 224 4.7E-34 T 13-09-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 PMA3_RS03595 76c962034c57b8e57dac81679382c53a 284 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 98 120 - T 13-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PMA3_RS03595 76c962034c57b8e57dac81679382c53a 284 PANTHER PTHR15362 31 183 8.7E-35 T 13-09-2016 PMA3_RS03595 76c962034c57b8e57dac81679382c53a 284 Pfam PF01066 CDP-alcohol phosphatidyltransferase 43 120 6.5E-14 T 13-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PMA3_RS15045 fc1593cee55426d70d1e9d938e2953bb 498 SUPERFAMILY SSF47345 1 85 6.8E-16 T 13-09-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 PMA3_RS15045 fc1593cee55426d70d1e9d938e2953bb 498 Pfam PF06958 S-type Pyocin 395 492 5.7E-12 T 13-09-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 PMA3_RS15045 fc1593cee55426d70d1e9d938e2953bb 498 Gene3D G3DSA:1.10.1200.20 1 85 9.5E-19 T 13-09-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 PMA3_RS15045 fc1593cee55426d70d1e9d938e2953bb 498 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 4 83 9.8E-16 T 13-09-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 PMA3_RS15045 fc1593cee55426d70d1e9d938e2953bb 498 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 10 84 3.0E-9 T 13-09-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 PMA3_RS15045 fc1593cee55426d70d1e9d938e2953bb 498 SUPERFAMILY SSF69369 397 497 1.44E-12 T 13-09-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 PMA3_RS03730 aefe403a27abd6393cbe51cdafd5ab1c 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 3.2E-53 T 13-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PMA3_RS03730 aefe403a27abd6393cbe51cdafd5ab1c 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.045 T 13-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PMA3_RS03730 aefe403a27abd6393cbe51cdafd5ab1c 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 13-09-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PMA3_RS03730 aefe403a27abd6393cbe51cdafd5ab1c 194 PANTHER PTHR17224 4 193 1.4E-76 T 13-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PMA3_RS03730 aefe403a27abd6393cbe51cdafd5ab1c 194 SUPERFAMILY SSF53178 4 191 1.14E-66 T 13-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PMA3_RS03730 aefe403a27abd6393cbe51cdafd5ab1c 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 190 2.7E-63 T 13-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PMA3_RS03730 aefe403a27abd6393cbe51cdafd5ab1c 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 13-09-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PMA3_RS03730 aefe403a27abd6393cbe51cdafd5ab1c 194 Gene3D G3DSA:3.40.50.1470 4 192 2.7E-68 T 13-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PMA3_RS03730 aefe403a27abd6393cbe51cdafd5ab1c 194 PANTHER PTHR17224:SF1 4 193 1.4E-76 T 13-09-2016 PMA3_RS06425 b7284b103928c56a645decea9850c009 116 Pfam PF11604 Copper binding periplasmic protein CusF 51 116 2.9E-22 T 13-09-2016 IPR021647 Copper binding periplasmic protein CusF PMA3_RS21130 aa111ece336cb6ab7a274471411ac22f 203 PIRSF PIRSF015617 6 203 4.0E-70 T 13-09-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PMA3_RS21130 aa111ece336cb6ab7a274471411ac22f 203 PANTHER PTHR30069 6 203 6.9E-63 T 13-09-2016 PMA3_RS21130 aa111ece336cb6ab7a274471411ac22f 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 31 202 4.9E-65 T 13-09-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PMA3_RS21130 aa111ece336cb6ab7a274471411ac22f 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 2 26 7.6E-9 T 13-09-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PMA3_RS21130 aa111ece336cb6ab7a274471411ac22f 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 34 202 2.0E-57 T 13-09-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PMA3_RS21130 aa111ece336cb6ab7a274471411ac22f 203 Gene3D G3DSA:3.40.50.300 8 202 7.6E-71 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21130 aa111ece336cb6ab7a274471411ac22f 203 SUPERFAMILY SSF52540 13 202 1.02E-69 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS29585 1cdec51d94d4a59128739b553d9b9798 324 PANTHER PTHR30572 89 309 3.0E-67 T 13-09-2016 PMA3_RS29585 1cdec51d94d4a59128739b553d9b9798 324 Pfam PF01618 MotA/TolQ/ExbB proton channel family 176 292 3.3E-34 T 13-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PMA3_RS29585 1cdec51d94d4a59128739b553d9b9798 324 PANTHER PTHR30572:SF11 89 309 3.0E-67 T 13-09-2016 PMA3_RS29585 1cdec51d94d4a59128739b553d9b9798 324 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 97 306 2.4E-104 T 13-09-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 PMA3_RS17080 2108707427d2918a4475c2ec5381c4a2 205 Pfam PF08887 GAD-like domain 5 107 2.4E-38 T 13-09-2016 IPR014983 GAD-related PMA3_RS17080 2108707427d2918a4475c2ec5381c4a2 205 Pfam PF08906 Domain of unknown function (DUF1851) 128 194 1.4E-20 T 13-09-2016 IPR015002 Domain of unknown function DUF1851 PMA3_RS17025 95e9fcd389fc3d9234683c256d4e19e5 406 Gene3D G3DSA:1.10.10.10 336 372 2.6E-5 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17025 95e9fcd389fc3d9234683c256d4e19e5 406 SUPERFAMILY SSF46785 329 386 6.98E-6 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS06500 0e6c1aa1b9154c94e6dd69e15efa7bf2 441 PANTHER PTHR34596 6 257 2.6E-112 T 13-09-2016 PMA3_RS06500 0e6c1aa1b9154c94e6dd69e15efa7bf2 441 PANTHER PTHR34596 273 441 2.6E-112 T 13-09-2016 PMA3_RS06500 0e6c1aa1b9154c94e6dd69e15efa7bf2 441 Pfam PF03573 outer membrane porin, OprD family 22 440 9.6E-124 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS06500 0e6c1aa1b9154c94e6dd69e15efa7bf2 441 Gene3D G3DSA:2.40.160.10 27 441 7.1E-131 T 13-09-2016 IPR023614 Porin domain PMA3_RS27930 9a1a2e45f42b72de1d46774670362b8f 163 Pfam PF12582 Protein of unknown function (DUF3757) 24 152 2.9E-6 T 13-09-2016 IPR022231 Protein of unknown function DUF3757 PMA3_RS13365 6f01dd0c8bd54bfb8a0b3449844c62b5 90 Pfam PF10976 Protein of unknown function (DUF2790) 15 87 1.7E-21 T 13-09-2016 IPR021245 Protein of unknown function DUF2790 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 SUPERFAMILY SSF51905 475 532 1.94E-86 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 SUPERFAMILY SSF51905 7 291 1.94E-86 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 SUPERFAMILY SSF54373 293 476 1.77E-58 T 13-09-2016 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 257 271 - T 13-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 Gene3D G3DSA:3.50.50.60 3 129 2.8E-120 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 Gene3D G3DSA:3.50.50.60 190 316 2.8E-120 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 Gene3D G3DSA:3.50.50.60 469 532 2.8E-120 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 PIRSF PIRSF000137 1 537 2.5E-150 T 13-09-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 PANTHER PTHR11552:SF51 1 547 6.3E-220 T 13-09-2016 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 PANTHER PTHR11552 1 547 6.3E-220 T 13-09-2016 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 Pfam PF00732 GMC oxidoreductase 8 298 1.3E-80 T 13-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PMA3_RS12965 9a512d3e016cf05daa5ce7f126858153 548 Pfam PF05199 GMC oxidoreductase 390 526 1.6E-40 T 13-09-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PMA3_RS00995 4f73aff7d0fb81131e8c347af6247326 229 PANTHER PTHR30450 1 229 5.5E-126 T 13-09-2016 PMA3_RS00995 4f73aff7d0fb81131e8c347af6247326 229 PANTHER PTHR30450:SF7 1 229 5.5E-126 T 13-09-2016 PMA3_RS00995 4f73aff7d0fb81131e8c347af6247326 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 116 1.6E-22 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS00995 4f73aff7d0fb81131e8c347af6247326 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 222 1.7E-16 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00995 4f73aff7d0fb81131e8c347af6247326 229 SUPERFAMILY SSF161098 12 207 8.11E-41 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS00995 4f73aff7d0fb81131e8c347af6247326 229 Gene3D G3DSA:1.10.3720.10 10 222 9.9E-42 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS13685 7fb8c0bd48fac08ae4d0fbceede44e2d 113 PANTHER PTHR33271 39 112 1.9E-21 T 13-09-2016 PMA3_RS13685 7fb8c0bd48fac08ae4d0fbceede44e2d 113 Pfam PF05899 Protein of unknown function (DUF861) 37 109 6.1E-26 T 13-09-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PMA3_RS13685 7fb8c0bd48fac08ae4d0fbceede44e2d 113 SUPERFAMILY SSF51182 18 111 5.03E-16 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS13685 7fb8c0bd48fac08ae4d0fbceede44e2d 113 Gene3D G3DSA:2.60.120.10 24 111 6.8E-28 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS18105 4b1990bb5fe134c574fcfacfab2457ff 558 Pfam PF06980 Protein of unknown function (DUF1302) 41 558 5.8E-131 T 13-09-2016 IPR010727 Protein of unknown function DUF1302 PMA3_RS24240 f0ab6de3697980b9f20e1b8fb921ef57 66 SUPERFAMILY SSF140319 2 64 4.05E-25 T 13-09-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PMA3_RS24240 f0ab6de3697980b9f20e1b8fb921ef57 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 1.3E-29 T 13-09-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PMA3_RS24240 f0ab6de3697980b9f20e1b8fb921ef57 66 PIRSF PIRSF039003 3 66 2.7E-32 T 13-09-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PMA3_RS24240 f0ab6de3697980b9f20e1b8fb921ef57 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.5E-32 T 13-09-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PMA3_RS24240 f0ab6de3697980b9f20e1b8fb921ef57 66 Gene3D G3DSA:1.10.10.600 1 66 4.0E-31 T 13-09-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PMA3_RS24240 f0ab6de3697980b9f20e1b8fb921ef57 66 PANTHER PTHR37532 1 66 1.3E-28 T 13-09-2016 PMA3_RS12065 03d51c298c633f24ca3560c8d7612941 471 PANTHER PTHR35369 1 471 7.8E-154 T 13-09-2016 PMA3_RS12065 03d51c298c633f24ca3560c8d7612941 471 PANTHER PTHR35369:SF2 1 471 7.8E-154 T 13-09-2016 PMA3_RS12065 03d51c298c633f24ca3560c8d7612941 471 Pfam PF00817 impB/mucB/samB family 24 150 3.1E-6 T 13-09-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PMA3_RS12065 03d51c298c633f24ca3560c8d7612941 471 SUPERFAMILY SSF56672 1 226 1.06E-32 T 13-09-2016 PMA3_RS09260 6f5bec947963b129e25755ca3ef87b4a 250 Pfam PF00484 Carbonic anhydrase 99 246 4.2E-35 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS09260 6f5bec947963b129e25755ca3ef87b4a 250 SMART SM00947 91 250 8.1E-50 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS09260 6f5bec947963b129e25755ca3ef87b4a 250 SUPERFAMILY SSF53056 50 249 2.35E-52 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS09260 6f5bec947963b129e25755ca3ef87b4a 250 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 140 160 - T 13-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS09260 6f5bec947963b129e25755ca3ef87b4a 250 Gene3D G3DSA:3.40.1050.10 46 249 1.3E-52 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS09260 6f5bec947963b129e25755ca3ef87b4a 250 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 103 110 - T 13-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS09260 6f5bec947963b129e25755ca3ef87b4a 250 PANTHER PTHR11002:SF17 8 249 9.3E-95 T 13-09-2016 PMA3_RS09260 6f5bec947963b129e25755ca3ef87b4a 250 PANTHER PTHR11002 8 249 9.3E-95 T 13-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PMA3_RS07635 8bddf434e976031fdf03be6bebe668c3 83 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 3 83 3.6E-10 T 13-09-2016 IPR021793 Major outer membrane lipoprotein Oprl PMA3_RS17385 374a29c5faa7098b69de9608bd3a68ab 279 PANTHER PTHR42194:SF1 6 273 7.2E-116 T 13-09-2016 PMA3_RS17385 374a29c5faa7098b69de9608bd3a68ab 279 Gene3D G3DSA:3.20.20.150 10 273 7.2E-100 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS17385 374a29c5faa7098b69de9608bd3a68ab 279 Pfam PF05114 Protein of unknown function (DUF692) 12 272 1.6E-102 T 13-09-2016 IPR007801 Uncharacterised protein family UPF0276 PMA3_RS17385 374a29c5faa7098b69de9608bd3a68ab 279 PANTHER PTHR42194 6 273 7.2E-116 T 13-09-2016 PMA3_RS17385 374a29c5faa7098b69de9608bd3a68ab 279 Hamap MF_00697 UPF0276 protein . 12 277 44.178 T 13-09-2016 IPR007801 Uncharacterised protein family UPF0276 PMA3_RS17385 374a29c5faa7098b69de9608bd3a68ab 279 SUPERFAMILY SSF51658 27 222 1.96E-12 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS19790 7c1caa257907d6fa9fe59a8622e21437 288 SUPERFAMILY SSF161098 51 276 4.71E-45 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS19790 7c1caa257907d6fa9fe59a8622e21437 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 277 5.2E-14 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS19790 7c1caa257907d6fa9fe59a8622e21437 288 PANTHER PTHR30193:SF6 6 279 8.1E-70 T 13-09-2016 PMA3_RS19790 7c1caa257907d6fa9fe59a8622e21437 288 PANTHER PTHR30193 6 279 8.1E-70 T 13-09-2016 PMA3_RS19790 7c1caa257907d6fa9fe59a8622e21437 288 Gene3D G3DSA:1.10.3720.10 7 277 3.1E-42 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS13020 234e153e162fad3a218ceb797424df80 602 PANTHER PTHR16254:SF6 1 563 2.3E-232 T 13-09-2016 PMA3_RS13020 234e153e162fad3a218ceb797424df80 602 Gene3D G3DSA:3.40.50.720 402 536 2.8E-35 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13020 234e153e162fad3a218ceb797424df80 602 SUPERFAMILY SSF51735 408 543 4.53E-31 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13020 234e153e162fad3a218ceb797424df80 602 Pfam PF02254 TrkA-N domain 409 522 1.1E-24 T 13-09-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PMA3_RS13020 234e153e162fad3a218ceb797424df80 602 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 286 6.5E-87 T 13-09-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 PMA3_RS13020 234e153e162fad3a218ceb797424df80 602 Pfam PF00999 Sodium/hydrogen exchanger family 13 378 5.6E-69 T 13-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PMA3_RS13020 234e153e162fad3a218ceb797424df80 602 PANTHER PTHR16254 1 563 2.3E-232 T 13-09-2016 PMA3_RS19855 78e7f2011a777e3267c1c70e78426804 574 Gene3D G3DSA:2.40.160.50 449 570 5.4E-18 T 13-09-2016 PMA3_RS19855 78e7f2011a777e3267c1c70e78426804 574 PANTHER PTHR12815 7 574 3.5E-201 T 13-09-2016 PMA3_RS19855 78e7f2011a777e3267c1c70e78426804 574 Pfam PF01103 Surface antigen 348 571 2.8E-35 T 13-09-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 PMA3_RS19855 78e7f2011a777e3267c1c70e78426804 574 Pfam PF07244 Surface antigen variable number repeat 190 259 7.0E-8 T 13-09-2016 IPR010827 Surface antigen variable number GO:0019867 PMA3_RS19855 78e7f2011a777e3267c1c70e78426804 574 PANTHER PTHR12815:SF12 7 574 3.5E-201 T 13-09-2016 PMA3_RS18200 c02a55a85ce9f958e960d70acded7795 340 PANTHER PTHR32196:SF21 27 335 3.1E-108 T 13-09-2016 PMA3_RS18200 c02a55a85ce9f958e960d70acded7795 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 66 327 2.5E-48 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS18200 c02a55a85ce9f958e960d70acded7795 340 PANTHER PTHR32196 27 335 3.1E-108 T 13-09-2016 PMA3_RS05560 f6c1e41ddd80b45a7f2d85d77c22491e 127 SUPERFAMILY SSF47413 10 54 5.07E-11 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS05560 f6c1e41ddd80b45a7f2d85d77c22491e 127 Pfam PF01381 Helix-turn-helix 19 52 2.8E-8 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS05560 f6c1e41ddd80b45a7f2d85d77c22491e 127 Gene3D G3DSA:1.10.260.40 7 53 2.5E-11 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS05560 f6c1e41ddd80b45a7f2d85d77c22491e 127 SMART SM00530 18 70 4.1E-7 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS28335 826c2f8060117ea50599e1a639788376 138 Pfam PF03817 Malonate transporter MadL subunit 1 117 5.6E-48 T 13-09-2016 IPR004690 Malonate transporter MadL subunit GO:0016020 PMA3_RS28335 826c2f8060117ea50599e1a639788376 138 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 122 6.2E-56 T 13-09-2016 IPR004690 Malonate transporter MadL subunit GO:0016020 PMA3_RS24705 bcb50eda43f98265c536619d32491875 730 PANTHER PTHR30509:SF6 15 267 0.0 T 13-09-2016 PMA3_RS24705 bcb50eda43f98265c536619d32491875 730 Pfam PF04632 Fusaric acid resistance protein family 30 714 6.2E-221 T 13-09-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PMA3_RS24705 bcb50eda43f98265c536619d32491875 730 PANTHER PTHR30509 15 267 0.0 T 13-09-2016 PMA3_RS24705 bcb50eda43f98265c536619d32491875 730 PANTHER PTHR30509 340 680 0.0 T 13-09-2016 PMA3_RS24705 bcb50eda43f98265c536619d32491875 730 PANTHER PTHR30509:SF6 340 680 0.0 T 13-09-2016 PMA3_RS20150 359d33585484ebffbb9c1f685a086564 292 PANTHER PTHR23150 46 292 1.3E-57 T 13-09-2016 PMA3_RS20150 359d33585484ebffbb9c1f685a086564 292 Pfam PF03781 Sulfatase-modifying factor enzyme 1 45 290 1.3E-58 T 13-09-2016 IPR005532 Sulfatase-modifying factor enzyme PMA3_RS20150 359d33585484ebffbb9c1f685a086564 292 Gene3D G3DSA:3.90.1580.10 37 291 4.2E-60 T 13-09-2016 IPR005532 Sulfatase-modifying factor enzyme PMA3_RS20150 359d33585484ebffbb9c1f685a086564 292 SUPERFAMILY SSF56436 44 292 5.65E-61 T 13-09-2016 IPR016187 C-type lectin fold PMA3_RS02980 67878d2b6d27ecf040ad229693e1f02e 148 Pfam PF10387 Protein of unknown function (DUF2442) 36 103 6.5E-6 T 13-09-2016 IPR018841 Protein of unknown function DUF2442 PMA3_RS17090 510419f22de4348154cce921d97d2060 451 Pfam PF15604 Novel toxin 15 301 447 6.9E-29 T 13-09-2016 IPR028949 Novel toxin 15 PMA3_RS27055 c282e2addb3689c97c48cf8f2c9eb61a 328 PANTHER PTHR34697:SF2 15 328 2.7E-33 T 13-09-2016 PMA3_RS27055 c282e2addb3689c97c48cf8f2c9eb61a 328 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 34 306 3.1E-12 T 13-09-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PMA3_RS27055 c282e2addb3689c97c48cf8f2c9eb61a 328 PANTHER PTHR34697 15 328 2.7E-33 T 13-09-2016 PMA3_RS00060 a7e8e38c6ee52587e9a15a1f943f1fd5 257 PANTHER PTHR30429:SF0 1 257 2.2E-136 T 13-09-2016 PMA3_RS00060 a7e8e38c6ee52587e9a15a1f943f1fd5 257 Gene3D G3DSA:3.40.190.10 20 148 2.6E-54 T 13-09-2016 PMA3_RS00060 a7e8e38c6ee52587e9a15a1f943f1fd5 257 PIRSF PIRSF002854 1 257 8.1E-102 T 13-09-2016 IPR004872 Lipoprotein NlpA family PMA3_RS00060 a7e8e38c6ee52587e9a15a1f943f1fd5 257 Pfam PF03180 NLPA lipoprotein 22 257 1.0E-98 T 13-09-2016 IPR004872 Lipoprotein NlpA family PMA3_RS00060 a7e8e38c6ee52587e9a15a1f943f1fd5 257 SUPERFAMILY SSF53850 21 257 8.14E-83 T 13-09-2016 PMA3_RS00060 a7e8e38c6ee52587e9a15a1f943f1fd5 257 PANTHER PTHR30429 1 257 2.2E-136 T 13-09-2016 IPR004872 Lipoprotein NlpA family PMA3_RS16685 dc609c7056453a1296cfc15a83b7c0c9 295 Gene3D G3DSA:3.40.50.1820 69 293 6.8E-64 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS16685 dc609c7056453a1296cfc15a83b7c0c9 295 PANTHER PTHR17630 1 294 2.2E-65 T 13-09-2016 PMA3_RS16685 dc609c7056453a1296cfc15a83b7c0c9 295 Pfam PF01738 Dienelactone hydrolase family 85 294 9.3E-53 T 13-09-2016 IPR002925 Dienelactone hydrolase GO:0016787 PMA3_RS16685 dc609c7056453a1296cfc15a83b7c0c9 295 SUPERFAMILY SSF53474 70 294 2.96E-50 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS16685 dc609c7056453a1296cfc15a83b7c0c9 295 PANTHER PTHR17630:SF32 1 294 2.2E-65 T 13-09-2016 PMA3_RS26765 fbf5e008e262ca05702227f141e6de3c 334 SUPERFAMILY SSF52980 27 214 5.9E-31 T 13-09-2016 IPR011335 Restriction endonuclease type II-like PMA3_RS26765 fbf5e008e262ca05702227f141e6de3c 334 Gene3D G3DSA:3.90.320.10 24 212 1.3E-27 T 13-09-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 PMA3_RS26765 fbf5e008e262ca05702227f141e6de3c 334 Pfam PF09588 YqaJ-like viral recombinase domain 30 172 2.4E-35 T 13-09-2016 IPR019080 YqaJ viral recombinase PMA3_RS26765 fbf5e008e262ca05702227f141e6de3c 334 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 23 182 3.0E-48 T 13-09-2016 IPR017482 Putative phage-type endonuclease PMA3_RS06325 58da6bfba2f10298ce31d86cdce4940a 165 Pfam PF16473 3' exoribonuclease, RNase T-like 2 157 2.4E-8 T 13-09-2016 IPR033390 3'-5' exoribonuclease Rv2179c-like domain PMA3_RS06325 58da6bfba2f10298ce31d86cdce4940a 165 SUPERFAMILY SSF53098 3 160 7.12E-10 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 Pfam PF14821 Threonine synthase N terminus 2 80 1.6E-20 T 13-09-2016 IPR029144 Threonine synthase, N-terminal PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 TIGRFAM TIGR00260 thrC: threonine synthase 78 394 6.1E-51 T 13-09-2016 IPR004450 Threonine synthase-like PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 Gene3D G3DSA:3.40.50.1100 212 422 1.2E-62 T 13-09-2016 PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 Gene3D G3DSA:3.90.1380.10 1 84 1.4E-21 T 13-09-2016 IPR029144 Threonine synthase, N-terminal PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 PANTHER PTHR10314 25 36 2.2E-81 T 13-09-2016 PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 SUPERFAMILY SSF53686 1 422 1.05E-99 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 98 401 2.2E-14 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 PANTHER PTHR10314 360 464 2.2E-81 T 13-09-2016 PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 PANTHER PTHR10314 53 329 2.2E-81 T 13-09-2016 PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 PANTHER PTHR10314:SF1 25 36 2.2E-81 T 13-09-2016 PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 PANTHER PTHR10314:SF1 360 464 2.2E-81 T 13-09-2016 PMA3_RS09630 b6caba2258fb25d8fba5e875520e029b 467 PANTHER PTHR10314:SF1 53 329 2.2E-81 T 13-09-2016 PMA3_RS02635 579211716a18f9fa7921b688f6dab124 249 Pfam PF13489 Methyltransferase domain 30 171 8.4E-15 T 13-09-2016 PMA3_RS02635 579211716a18f9fa7921b688f6dab124 249 Gene3D G3DSA:3.40.50.150 34 247 1.7E-31 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS02635 579211716a18f9fa7921b688f6dab124 249 SUPERFAMILY SSF53335 4 247 5.93E-37 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS02635 579211716a18f9fa7921b688f6dab124 249 PANTHER PTHR10108 34 156 4.3E-22 T 13-09-2016 PMA3_RS23140 4f8dfcb97d8f36a08b3f435c52f7d712 321 PIRSF PIRSF018266 10 320 4.3E-70 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS23140 4f8dfcb97d8f36a08b3f435c52f7d712 321 Pfam PF16344 Domain of unknown function (DUF4974) 241 300 1.1E-8 T 13-09-2016 IPR032508 Protein FecR, C-terminal PMA3_RS23140 4f8dfcb97d8f36a08b3f435c52f7d712 321 Pfam PF16220 Domain of unknown function (DUF4880) 21 60 1.0E-11 T 13-09-2016 IPR032623 FecR, N-terminal PMA3_RS23140 4f8dfcb97d8f36a08b3f435c52f7d712 321 PANTHER PTHR30273 13 320 1.3E-42 T 13-09-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PMA3_RS23140 4f8dfcb97d8f36a08b3f435c52f7d712 321 Pfam PF04773 FecR protein 120 208 6.8E-18 T 13-09-2016 IPR006860 FecR protein PMA3_RS18090 06dbfa6575eb14b5c1e236fcb0375578 806 PANTHER PTHR33406:SF2 142 784 6.9E-86 T 13-09-2016 PMA3_RS18090 06dbfa6575eb14b5c1e236fcb0375578 806 Gene3D G3DSA:1.20.1640.10 603 794 2.2E-27 T 13-09-2016 PMA3_RS18090 06dbfa6575eb14b5c1e236fcb0375578 806 Gene3D G3DSA:1.20.1640.10 208 399 1.2E-21 T 13-09-2016 PMA3_RS18090 06dbfa6575eb14b5c1e236fcb0375578 806 PANTHER PTHR33406 15 117 6.9E-86 T 13-09-2016 PMA3_RS18090 06dbfa6575eb14b5c1e236fcb0375578 806 Pfam PF03176 MMPL family 579 790 1.3E-15 T 13-09-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PMA3_RS18090 06dbfa6575eb14b5c1e236fcb0375578 806 SUPERFAMILY SSF82866 589 790 5.75E-33 T 13-09-2016 PMA3_RS18090 06dbfa6575eb14b5c1e236fcb0375578 806 PANTHER PTHR33406 142 784 6.9E-86 T 13-09-2016 PMA3_RS18090 06dbfa6575eb14b5c1e236fcb0375578 806 SUPERFAMILY SSF82866 197 398 1.83E-23 T 13-09-2016 PMA3_RS18090 06dbfa6575eb14b5c1e236fcb0375578 806 PANTHER PTHR33406:SF2 15 117 6.9E-86 T 13-09-2016 PMA3_RS26910 9c379153ab1b7cbb8b30e71f26615398 266 Pfam PF01497 Periplasmic binding protein 23 235 3.9E-27 T 13-09-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PMA3_RS26910 9c379153ab1b7cbb8b30e71f26615398 266 Gene3D G3DSA:3.40.50.1980 21 132 4.5E-27 T 13-09-2016 PMA3_RS26910 9c379153ab1b7cbb8b30e71f26615398 266 SUPERFAMILY SSF53807 21 265 1.73E-54 T 13-09-2016 PMA3_RS26910 9c379153ab1b7cbb8b30e71f26615398 266 PANTHER PTHR30535 21 266 2.9E-46 T 13-09-2016 PMA3_RS26910 9c379153ab1b7cbb8b30e71f26615398 266 Gene3D G3DSA:3.40.50.1980 141 266 3.4E-33 T 13-09-2016 PMA3_RS25620 11059a0a451c94c7a158643d1a6cdc08 160 SUPERFAMILY SSF74982 5 136 9.42E-49 T 13-09-2016 IPR023620 Small protein B PMA3_RS25620 11059a0a451c94c7a158643d1a6cdc08 160 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 13-09-2016 IPR020081 SsrA-binding protein, conserved site PMA3_RS25620 11059a0a451c94c7a158643d1a6cdc08 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 7.0E-58 T 13-09-2016 IPR000037 SsrA-binding protein GO:0003723 PMA3_RS25620 11059a0a451c94c7a158643d1a6cdc08 160 Gene3D G3DSA:2.40.280.10 11 131 7.4E-48 T 13-09-2016 IPR023620 Small protein B PMA3_RS25620 11059a0a451c94c7a158643d1a6cdc08 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 153 1.3E-51 T 13-09-2016 IPR000037 SsrA-binding protein GO:0003723 PMA3_RS25620 11059a0a451c94c7a158643d1a6cdc08 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 68.54 T 13-09-2016 IPR000037 SsrA-binding protein GO:0003723 PMA3_RS25620 11059a0a451c94c7a158643d1a6cdc08 160 PANTHER PTHR30308:SF2 1 159 6.8E-74 T 13-09-2016 PMA3_RS25620 11059a0a451c94c7a158643d1a6cdc08 160 PANTHER PTHR30308 1 159 6.8E-74 T 13-09-2016 PMA3_RS25620 11059a0a451c94c7a158643d1a6cdc08 160 Pfam PF01668 SmpB protein 11 74 9.2E-29 T 13-09-2016 IPR000037 SsrA-binding protein GO:0003723 PMA3_RS10530 a9fc3b4a9740e3b54b816bb4e563cb5d 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 165 2.4E-10 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS10530 a9fc3b4a9740e3b54b816bb4e563cb5d 726 Gene3D G3DSA:2.40.170.20 179 726 4.7E-106 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS10530 a9fc3b4a9740e3b54b816bb4e563cb5d 726 PANTHER PTHR32552:SF1 22 726 3.8E-212 T 13-09-2016 PMA3_RS10530 a9fc3b4a9740e3b54b816bb4e563cb5d 726 SUPERFAMILY SSF56935 32 726 2.29E-96 T 13-09-2016 PMA3_RS10530 a9fc3b4a9740e3b54b816bb4e563cb5d 726 Pfam PF00593 TonB dependent receptor 484 722 3.2E-22 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS10530 a9fc3b4a9740e3b54b816bb4e563cb5d 726 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 69 726 2.4E-119 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS10530 a9fc3b4a9740e3b54b816bb4e563cb5d 726 Gene3D G3DSA:2.170.130.10 31 175 1.7E-24 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS10530 a9fc3b4a9740e3b54b816bb4e563cb5d 726 PANTHER PTHR32552 22 726 3.8E-212 T 13-09-2016 PMA3_RS14355 89eb68d8a49cd7b29f85a26e156ba40d 267 SUPERFAMILY SSF46894 198 260 8.16E-15 T 13-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PMA3_RS14355 89eb68d8a49cd7b29f85a26e156ba40d 267 Pfam PF00196 Bacterial regulatory proteins, luxR family 204 258 2.2E-13 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS14355 89eb68d8a49cd7b29f85a26e156ba40d 267 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 235 1.3E-8 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS14355 89eb68d8a49cd7b29f85a26e156ba40d 267 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 235 247 1.3E-8 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS14355 89eb68d8a49cd7b29f85a26e156ba40d 267 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 219 1.3E-8 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS14355 89eb68d8a49cd7b29f85a26e156ba40d 267 SMART SM00421 202 259 1.7E-16 T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS14355 89eb68d8a49cd7b29f85a26e156ba40d 267 ProSitePatterns PS00622 LuxR-type HTH domain signature. 219 246 - T 13-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PMA3_RS14355 89eb68d8a49cd7b29f85a26e156ba40d 267 Gene3D G3DSA:1.10.10.10 204 260 2.1E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS15180 bd5dc145beb5e9ce4be48bc77c00fad0 164 Pfam PF14316 Domain of unknown function (DUF4381) 5 162 1.6E-40 T 13-09-2016 IPR025489 Protein of unknown function (DUF4381 PMA3_RS01220 9ddb8e60e1bf5932bd3a2579afe2c0b1 457 Gene3D G3DSA:2.60.120.260 153 223 4.0E-4 T 13-09-2016 IPR008979 Galactose-binding domain-like PMA3_RS01220 9ddb8e60e1bf5932bd3a2579afe2c0b1 457 Pfam PF13163 Protein of unknown function (DUF3999) 29 449 3.9E-149 T 13-09-2016 IPR025060 Protein of unknown function DUF3999 PMA3_RS10335 9c30c891b87e194d411f073b2b529015 387 Gene3D G3DSA:1.20.1640.10 239 330 7.5E-6 T 13-09-2016 PMA3_RS10335 9c30c891b87e194d411f073b2b529015 387 Gene3D G3DSA:1.20.1640.10 82 144 7.5E-6 T 13-09-2016 PMA3_RS10335 9c30c891b87e194d411f073b2b529015 387 Gene3D G3DSA:3.30.70.20 23 78 2.6E-5 T 13-09-2016 PMA3_RS10335 9c30c891b87e194d411f073b2b529015 387 SUPERFAMILY SSF54862 25 96 1.88E-5 T 13-09-2016 PMA3_RS10335 9c30c891b87e194d411f073b2b529015 387 SUPERFAMILY SSF103501 161 190 1.19E-29 T 13-09-2016 IPR023234 NarG-like domain PMA3_RS10335 9c30c891b87e194d411f073b2b529015 387 SUPERFAMILY SSF103501 217 378 1.19E-29 T 13-09-2016 IPR023234 NarG-like domain PMA3_RS10335 9c30c891b87e194d411f073b2b529015 387 TIGRFAM TIGR02484 CitB: CitB domain protein 22 378 4.2E-121 T 13-09-2016 IPR012830 Citrate utilization protein B PMA3_RS19190 c004a5a35a97870812f20aac4fcd2187 428 PANTHER PTHR13847 8 401 2.7E-157 T 13-09-2016 PMA3_RS19190 c004a5a35a97870812f20aac4fcd2187 428 Pfam PF01266 FAD dependent oxidoreductase 30 381 1.6E-52 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS19190 c004a5a35a97870812f20aac4fcd2187 428 Gene3D G3DSA:3.50.50.60 345 395 1.1E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19190 c004a5a35a97870812f20aac4fcd2187 428 Gene3D G3DSA:3.50.50.60 172 252 1.1E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19190 c004a5a35a97870812f20aac4fcd2187 428 Gene3D G3DSA:3.50.50.60 26 119 1.1E-45 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19190 c004a5a35a97870812f20aac4fcd2187 428 SUPERFAMILY SSF51905 29 253 4.01E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19190 c004a5a35a97870812f20aac4fcd2187 428 SUPERFAMILY SSF51905 345 396 4.01E-43 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19190 c004a5a35a97870812f20aac4fcd2187 428 PANTHER PTHR13847:SF190 8 401 2.7E-157 T 13-09-2016 PMA3_RS23095 b5b516f1127c96dfe68e6e90c211cad1 435 PANTHER PTHR30061:SF22 1 434 1.9E-105 T 13-09-2016 PMA3_RS23095 b5b516f1127c96dfe68e6e90c211cad1 435 Gene3D G3DSA:3.40.190.10 155 361 4.1E-29 T 13-09-2016 PMA3_RS23095 b5b516f1127c96dfe68e6e90c211cad1 435 SUPERFAMILY SSF53850 31 433 1.09E-56 T 13-09-2016 PMA3_RS23095 b5b516f1127c96dfe68e6e90c211cad1 435 PANTHER PTHR30061 1 434 1.9E-105 T 13-09-2016 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 PANTHER PTHR23293 1 157 1.2E-94 T 13-09-2016 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 PANTHER PTHR23293:SF6 177 210 1.2E-94 T 13-09-2016 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 PANTHER PTHR23293:SF6 248 305 1.2E-94 T 13-09-2016 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 PANTHER PTHR23293:SF6 1 157 1.2E-94 T 13-09-2016 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 PANTHER PTHR23293 248 305 1.2E-94 T 13-09-2016 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 PANTHER PTHR23293 177 210 1.2E-94 T 13-09-2016 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 PIRSF PIRSF002936 1 305 1.6E-152 T 13-09-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 Gene3D G3DSA:3.40.50.620 5 209 7.9E-63 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 Gene3D G3DSA:3.40.50.620 247 256 7.9E-63 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 8 305 2.8E-155 T 13-09-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 3 305 55.816 T 13-09-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 SUPERFAMILY SSF52402 5 209 3.96E-77 T 13-09-2016 PMA3_RS25015 6296a35b14868153cedcee9a20c275a1 305 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 260 1.8E-65 T 13-09-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 PMA3_RS21310 bb3bf9bc7ae714344132ea02ec838e54 355 SUPERFAMILY SSF56399 138 169 8.34E-6 T 13-09-2016 PMA3_RS21310 bb3bf9bc7ae714344132ea02ec838e54 355 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 97 176 1.0E-21 T 13-09-2016 IPR022385 Rhs repeat-associated core GO:0097264 PMA3_RS23650 3eeb509efa06cc717094af5a5e1e9442 237 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 20 226 7.1E-50 T 13-09-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PMA3_RS23650 3eeb509efa06cc717094af5a5e1e9442 237 PIRSF PIRSF026326 1 237 2.3E-101 T 13-09-2016 IPR027023 Putative lipopolysaccharide kinase InaA PMA3_RS23650 3eeb509efa06cc717094af5a5e1e9442 237 SUPERFAMILY SSF56112 30 193 2.81E-5 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS21325 b0a2dbc21230d57925129821ce8fc72e 262 PRINTS PR01805 VacJ lipoprotein signature 82 98 2.1E-23 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS21325 b0a2dbc21230d57925129821ce8fc72e 262 PRINTS PR01805 VacJ lipoprotein signature 169 186 2.1E-23 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS21325 b0a2dbc21230d57925129821ce8fc72e 262 PRINTS PR01805 VacJ lipoprotein signature 133 150 2.1E-23 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS21325 b0a2dbc21230d57925129821ce8fc72e 262 PRINTS PR01805 VacJ lipoprotein signature 65 78 2.1E-23 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS21325 b0a2dbc21230d57925129821ce8fc72e 262 PANTHER PTHR30035:SF2 2 262 7.4E-114 T 13-09-2016 PMA3_RS21325 b0a2dbc21230d57925129821ce8fc72e 262 Pfam PF04333 MlaA lipoprotein 64 257 1.3E-65 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS21325 b0a2dbc21230d57925129821ce8fc72e 262 PANTHER PTHR30035 2 262 7.4E-114 T 13-09-2016 IPR007428 MlaA lipoprotein GO:0016020 PMA3_RS26875 8fa12a82ff8a8f73d30e6602d2304a49 221 Pfam PF06672 Protein of unknown function (DUF1175) 33 219 4.3E-77 T 13-09-2016 IPR009558 Protein of unknown function DUF1175 PMA3_RS26875 8fa12a82ff8a8f73d30e6602d2304a49 221 Gene3D G3DSA:3.90.1720.10 60 191 1.4E-7 T 13-09-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS13735 66fda414b3b5c4876a3237f97399979f 448 PANTHER PTHR23508:SF12 13 440 4.6E-205 T 13-09-2016 PMA3_RS13735 66fda414b3b5c4876a3237f97399979f 448 Gene3D G3DSA:1.20.1250.20 15 222 4.3E-23 T 13-09-2016 PMA3_RS13735 66fda414b3b5c4876a3237f97399979f 448 Gene3D G3DSA:1.20.1250.20 233 420 5.7E-15 T 13-09-2016 PMA3_RS13735 66fda414b3b5c4876a3237f97399979f 448 Pfam PF00083 Sugar (and other) transporter 20 214 4.3E-26 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS13735 66fda414b3b5c4876a3237f97399979f 448 Pfam PF07690 Major Facilitator Superfamily 268 412 1.0E-8 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS13735 66fda414b3b5c4876a3237f97399979f 448 SUPERFAMILY SSF103473 12 418 3.01E-59 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS13735 66fda414b3b5c4876a3237f97399979f 448 PANTHER PTHR23508 13 440 4.6E-205 T 13-09-2016 PMA3_RS13735 66fda414b3b5c4876a3237f97399979f 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS07165 467854f3486a302beca7117c80919042 296 PANTHER PTHR11079:SF61 21 296 6.4E-94 T 13-09-2016 PMA3_RS07165 467854f3486a302beca7117c80919042 296 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 13-09-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS07165 467854f3486a302beca7117c80919042 296 Pfam PF00849 RNA pseudouridylate synthase 95 241 2.7E-21 T 13-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS07165 467854f3486a302beca7117c80919042 296 PANTHER PTHR11079 21 296 6.4E-94 T 13-09-2016 PMA3_RS07165 467854f3486a302beca7117c80919042 296 SUPERFAMILY SSF55120 80 291 5.76E-49 T 13-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PMA3_RS13490 b97c49c91ca8b474436fca2f64f55ef0 558 PANTHER PTHR36837 1 558 5.1E-244 T 13-09-2016 PMA3_RS13490 b97c49c91ca8b474436fca2f64f55ef0 558 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 75 242 1.1E-61 T 13-09-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PMA3_RS13490 b97c49c91ca8b474436fca2f64f55ef0 558 SUPERFAMILY SSF53474 198 481 5.43E-34 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13490 b97c49c91ca8b474436fca2f64f55ef0 558 Gene3D G3DSA:3.40.50.1820 159 528 7.5E-53 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13490 b97c49c91ca8b474436fca2f64f55ef0 558 PANTHER PTHR36837:SF2 1 558 5.1E-244 T 13-09-2016 PMA3_RS13490 b97c49c91ca8b474436fca2f64f55ef0 558 TIGRFAM TIGR01839 PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II 2 558 2.1E-273 T 13-09-2016 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PMA3_RS11670 535f598342feba3c6ff76c61c8d01922 152 PANTHER PTHR36966 2 152 3.9E-25 T 13-09-2016 PMA3_RS11670 535f598342feba3c6ff76c61c8d01922 152 SUPERFAMILY SSF143422 10 137 5.76E-29 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS11670 535f598342feba3c6ff76c61c8d01922 152 PANTHER PTHR36966:SF1 2 152 3.9E-25 T 13-09-2016 PMA3_RS11670 535f598342feba3c6ff76c61c8d01922 152 SMART SM01321 17 131 2.1E-34 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS11670 535f598342feba3c6ff76c61c8d01922 152 Pfam PF01797 Transposase IS200 like 21 130 1.3E-12 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS11670 535f598342feba3c6ff76c61c8d01922 152 Gene3D G3DSA:3.30.70.1290 7 133 1.5E-17 T 13-09-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PMA3_RS00490 787f48d87100411630c2afbb1887e0b2 186 Pfam PF01161 Phosphatidylethanolamine-binding protein 55 183 6.4E-33 T 13-09-2016 IPR008914 Phosphatidylethanolamine-binding protein PMA3_RS00490 787f48d87100411630c2afbb1887e0b2 186 SUPERFAMILY SSF49777 30 185 1.44E-41 T 13-09-2016 IPR008914 Phosphatidylethanolamine-binding protein PMA3_RS00490 787f48d87100411630c2afbb1887e0b2 186 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 52 180 4.0E-31 T 13-09-2016 IPR005247 YbhB/YbcL PMA3_RS00490 787f48d87100411630c2afbb1887e0b2 186 Gene3D G3DSA:3.90.280.10 29 185 1.1E-42 T 13-09-2016 IPR008914 Phosphatidylethanolamine-binding protein PMA3_RS00490 787f48d87100411630c2afbb1887e0b2 186 PANTHER PTHR30289 30 186 3.6E-31 T 13-09-2016 PMA3_RS20810 712d2ef2d228311b810119d73e6c0b1c 564 Pfam PF03814 Potassium-transporting ATPase A subunit 11 560 2.3E-238 T 13-09-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PMA3_RS20810 712d2ef2d228311b810119d73e6c0b1c 564 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 5 561 3.9E-225 T 13-09-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PMA3_RS20810 712d2ef2d228311b810119d73e6c0b1c 564 PANTHER PTHR30607 2 564 1.0E-298 T 13-09-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PMA3_RS20810 712d2ef2d228311b810119d73e6c0b1c 564 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 562 34.52 T 13-09-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PMA3_RS20810 712d2ef2d228311b810119d73e6c0b1c 564 PIRSF PIRSF001294 1 564 4.0E-240 T 13-09-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PMA3_RS22080 30b496ef4b820da08c05d6196f7bd991 238 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 237 1.3E-56 T 13-09-2016 IPR010239 Conserved hypothetical protein CHP02001 PMA3_RS22080 30b496ef4b820da08c05d6196f7bd991 238 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 55 220 1.5E-15 T 13-09-2016 IPR010239 Conserved hypothetical protein CHP02001 PMA3_RS25180 24cbf2770bfd9f3996c11effb7ee6de5 1267 PANTHER PTHR38690 3 1267 5.2E-284 T 13-09-2016 PMA3_RS25180 24cbf2770bfd9f3996c11effb7ee6de5 1267 Pfam PF13116 Protein of unknown function 514 792 7.0E-53 T 13-09-2016 IPR025263 Domain of unknown function DUF3971 PMA3_RS25180 24cbf2770bfd9f3996c11effb7ee6de5 1267 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 10 1266 0.0 T 13-09-2016 IPR011836 Conserved hypothetical protein CHP02099 PMA3_RS25180 24cbf2770bfd9f3996c11effb7ee6de5 1267 Pfam PF13502 AsmA-like C-terminal region 1016 1260 1.3E-47 T 13-09-2016 IPR032712 AsmA-like, C-terminal PMA3_RS00750 39bb01380ef862fc59ab8c6d6b06cd99 345 Pfam PF00248 Aldo/keto reductase family 28 329 2.0E-67 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS00750 39bb01380ef862fc59ab8c6d6b06cd99 345 PANTHER PTHR11732 13 332 6.8E-168 T 13-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PMA3_RS00750 39bb01380ef862fc59ab8c6d6b06cd99 345 Gene3D G3DSA:3.20.20.100 13 331 9.0E-87 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS00750 39bb01380ef862fc59ab8c6d6b06cd99 345 PANTHER PTHR11732:SF191 13 332 6.8E-168 T 13-09-2016 PMA3_RS00750 39bb01380ef862fc59ab8c6d6b06cd99 345 SUPERFAMILY SSF51430 14 331 9.17E-90 T 13-09-2016 IPR023210 NADP-dependent oxidoreductase domain PMA3_RS23440 c6e19945151a5843682a01225bca8655 119 Pfam PF07238 PilZ domain 5 99 8.6E-6 T 13-09-2016 IPR009875 PilZ domain GO:0035438 PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 Gene3D G3DSA:3.40.50.980 219 386 1.8E-42 T 13-09-2016 PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 Gene3D G3DSA:2.30.38.10 387 460 2.0E-28 T 13-09-2016 PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 Pfam PF00501 AMP-binding enzyme 30 469 2.1E-108 T 13-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 13-09-2016 IPR020845 AMP-binding, conserved site PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 Gene3D G3DSA:3.30.300.30 464 561 7.1E-32 T 13-09-2016 PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 SUPERFAMILY SSF56801 21 561 2.22E-148 T 13-09-2016 PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 Gene3D G3DSA:3.40.50.980 185 218 1.1E-32 T 13-09-2016 PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 Gene3D G3DSA:3.40.50.980 23 145 1.1E-32 T 13-09-2016 PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 478 552 1.9E-21 T 13-09-2016 IPR025110 AMP-binding enzyme C-terminal domain PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 PANTHER PTHR24096 177 560 4.1E-174 T 13-09-2016 PMA3_RS23000 2ea4856c38ada69f9bf7d73fc9dcd064 562 PANTHER PTHR24096 16 161 4.1E-174 T 13-09-2016 PMA3_RS08905 2c97bab59cea169dde66b545b908878a 398 Pfam PF00155 Aminotransferase class I and II 28 394 8.6E-83 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS08905 2c97bab59cea169dde66b545b908878a 398 PANTHER PTHR11879 1 398 6.1E-239 T 13-09-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PMA3_RS08905 2c97bab59cea169dde66b545b908878a 398 Gene3D G3DSA:3.40.640.10 48 317 3.5E-108 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS08905 2c97bab59cea169dde66b545b908878a 398 PANTHER PTHR11879:SF11 1 398 6.1E-239 T 13-09-2016 PMA3_RS08905 2c97bab59cea169dde66b545b908878a 398 SUPERFAMILY SSF53383 1 398 1.25E-117 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS08905 2c97bab59cea169dde66b545b908878a 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 2.6E-38 T 13-09-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PMA3_RS08905 2c97bab59cea169dde66b545b908878a 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 2.6E-38 T 13-09-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PMA3_RS08905 2c97bab59cea169dde66b545b908878a 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 2.6E-38 T 13-09-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PMA3_RS08905 2c97bab59cea169dde66b545b908878a 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 2.6E-38 T 13-09-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PMA3_RS08905 2c97bab59cea169dde66b545b908878a 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 13-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PMA3_RS16085 6f7328fa8a7c54fbbd08a4c5f7c0ddf0 119 Gene3D G3DSA:3.30.365.10 3 115 2.5E-12 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS16085 6f7328fa8a7c54fbbd08a4c5f7c0ddf0 119 SUPERFAMILY SSF56003 3 115 2.62E-15 T 13-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.1E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.1E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.1E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PANTHER PTHR24322 16 140 9.3E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PANTHER PTHR24322 156 186 9.3E-42 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 Gene3D G3DSA:3.40.50.720 9 246 6.9E-69 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 SUPERFAMILY SSF51735 11 246 1.12E-66 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 191 8.3E-4 T 13-09-2016 PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.6E-34 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 7.6E-34 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.6E-34 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.6E-34 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 7.6E-34 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.6E-34 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11620 278001d72033b6415a6419892cd2f207 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 246 9.9E-51 T 13-09-2016 PMA3_RS11335 f7a738abd40ee3adeaa5e3995f4062de 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 73 495 2.5E-197 T 13-09-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PMA3_RS11335 f7a738abd40ee3adeaa5e3995f4062de 500 PANTHER PTHR35565:SF3 2 500 2.0E-270 T 13-09-2016 PMA3_RS11335 f7a738abd40ee3adeaa5e3995f4062de 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 24 495 1.0E-220 T 13-09-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PMA3_RS11335 f7a738abd40ee3adeaa5e3995f4062de 500 PANTHER PTHR35565 2 500 2.0E-270 T 13-09-2016 PMA3_RS01375 530cce79a70782fb540cccf8f63e5cfe 133 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 108 32.97 T 13-09-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 PMA3_RS01375 530cce79a70782fb540cccf8f63e5cfe 133 SUPERFAMILY SSF141734 4 119 1.7E-49 T 13-09-2016 PMA3_RS01375 530cce79a70782fb540cccf8f63e5cfe 133 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 104 1.4E-33 T 13-09-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 PMA3_RS01375 530cce79a70782fb540cccf8f63e5cfe 133 PANTHER PTHR21256 1 128 9.4E-65 T 13-09-2016 PMA3_RS01375 530cce79a70782fb540cccf8f63e5cfe 133 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 104 5.0E-25 T 13-09-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 PMA3_RS26440 af904ecd408476faa1e30fd1de99426a 487 SUPERFAMILY SSF50494 418 456 2.33E-11 T 13-09-2016 IPR009003 Peptidase S1, PA clan PMA3_RS26440 af904ecd408476faa1e30fd1de99426a 487 SUPERFAMILY SSF50494 266 372 2.33E-11 T 13-09-2016 IPR009003 Peptidase S1, PA clan PMA3_RS26440 af904ecd408476faa1e30fd1de99426a 487 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 286 291 - T 13-09-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 PMA3_RS20820 279893824cabaa4f08700ac3d8c8cc90 55 Pfam PF11446 Protein of unknown function (DUF2897) 1 53 7.9E-24 T 13-09-2016 IPR021550 Protein of unknown function DUF2897 PMA3_RS24285 adfa266e63511c26d73e5523255f2d79 256 PANTHER PTHR12029 3 183 1.6E-38 T 13-09-2016 PMA3_RS24285 adfa266e63511c26d73e5523255f2d79 256 SUPERFAMILY SSF75217 4 167 4.97E-38 T 13-09-2016 IPR029028 Alpha/beta knot methyltransferases PMA3_RS24285 adfa266e63511c26d73e5523255f2d79 256 Gene3D G3DSA:3.40.1280.10 3 161 3.3E-33 T 13-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PMA3_RS24285 adfa266e63511c26d73e5523255f2d79 256 Pfam PF00588 SpoU rRNA Methylase family 5 155 1.0E-33 T 13-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PMA3_RS24285 adfa266e63511c26d73e5523255f2d79 256 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 246 1.8E-79 T 13-09-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PMA3_RS24285 adfa266e63511c26d73e5523255f2d79 256 PIRSF PIRSF004808 1 251 1.2E-74 T 13-09-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PMA3_RS12195 02055053e85abc55c266271692468b28 236 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 116 220 1.7E-11 T 13-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PMA3_RS12195 02055053e85abc55c266271692468b28 236 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 108 3.9E-10 T 13-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PMA3_RS12195 02055053e85abc55c266271692468b28 236 Gene3D G3DSA:3.40.50.1240 4 225 2.0E-33 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS12195 02055053e85abc55c266271692468b28 236 PANTHER PTHR23029 4 225 1.9E-23 T 13-09-2016 PMA3_RS12195 02055053e85abc55c266271692468b28 236 PANTHER PTHR23029:SF1 4 225 1.9E-23 T 13-09-2016 PMA3_RS12195 02055053e85abc55c266271692468b28 236 SMART SM00855 3 179 2.4E-12 T 13-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PMA3_RS12195 02055053e85abc55c266271692468b28 236 SUPERFAMILY SSF53254 4 231 1.39E-37 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 Gene3D G3DSA:3.50.50.60 212 393 6.3E-9 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 10 322 1.2E-21 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PANTHER PTHR23023 77 316 2.1E-71 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PANTHER PTHR23023 2 59 2.1E-71 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PANTHER PTHR23023 333 393 2.1E-71 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 199 224 1.4E-7 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 313 1.4E-7 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.4E-7 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 Gene3D G3DSA:3.50.50.60 3 211 4.8E-25 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 SUPERFAMILY SSF51905 7 48 4.21E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 SUPERFAMILY SSF51905 89 394 4.21E-28 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PANTHER PTHR23023:SF100 77 316 2.1E-71 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PANTHER PTHR23023:SF100 2 59 2.1E-71 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PANTHER PTHR23023:SF100 333 393 2.1E-71 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.7E-9 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 199 217 1.7E-9 T 13-09-2016 PMA3_RS09425 d90f64c17ec7e0d200c018d9c9afdf3f 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 314 1.7E-9 T 13-09-2016 PMA3_RS14825 b80b8dc5c5478854528fd533fcdfaabd 235 PANTHER PTHR33741 6 178 4.7E-17 T 13-09-2016 PMA3_RS14825 b80b8dc5c5478854528fd533fcdfaabd 235 Pfam PF04982 HPP family 47 166 1.1E-29 T 13-09-2016 IPR007065 HPP PMA3_RS23550 e8eeee2d626926e45b05b12491be4241 295 PANTHER PTHR30537 1 291 2.1E-147 T 13-09-2016 PMA3_RS23550 e8eeee2d626926e45b05b12491be4241 295 SUPERFAMILY SSF46785 1 80 3.95E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23550 e8eeee2d626926e45b05b12491be4241 295 Gene3D G3DSA:3.40.190.10 86 171 1.3E-21 T 13-09-2016 PMA3_RS23550 e8eeee2d626926e45b05b12491be4241 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 5.7E-17 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS23550 e8eeee2d626926e45b05b12491be4241 295 Pfam PF03466 LysR substrate binding domain 82 281 2.0E-43 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS23550 e8eeee2d626926e45b05b12491be4241 295 PANTHER PTHR30537:SF13 1 291 2.1E-147 T 13-09-2016 PMA3_RS23550 e8eeee2d626926e45b05b12491be4241 295 Gene3D G3DSA:3.40.190.10 172 254 5.9E-10 T 13-09-2016 PMA3_RS23550 e8eeee2d626926e45b05b12491be4241 295 Gene3D G3DSA:1.10.10.10 1 79 6.6E-23 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS23550 e8eeee2d626926e45b05b12491be4241 295 SUPERFAMILY SSF53850 84 288 2.48E-47 T 13-09-2016 PMA3_RS13665 84537f8ac27f38b444441d3bfd1fb194 824 SUPERFAMILY SSF52540 479 794 2.38E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13665 84537f8ac27f38b444441d3bfd1fb194 824 SUPERFAMILY SSF52540 127 281 2.38E-56 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13665 84537f8ac27f38b444441d3bfd1fb194 824 Gene3D G3DSA:3.40.50.300 617 797 1.9E-20 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13665 84537f8ac27f38b444441d3bfd1fb194 824 PANTHER PTHR11070 126 301 5.2E-39 T 13-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PMA3_RS13665 84537f8ac27f38b444441d3bfd1fb194 824 PANTHER PTHR11070 455 787 5.2E-39 T 13-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PMA3_RS13665 84537f8ac27f38b444441d3bfd1fb194 824 Pfam PF00580 UvrD/REP helicase N-terminal domain 525 606 4.2E-12 T 13-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PMA3_RS13665 84537f8ac27f38b444441d3bfd1fb194 824 Pfam PF00580 UvrD/REP helicase N-terminal domain 130 223 2.6E-7 T 13-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PMA3_RS13665 84537f8ac27f38b444441d3bfd1fb194 824 Gene3D G3DSA:3.40.50.300 489 607 1.1E-38 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13665 84537f8ac27f38b444441d3bfd1fb194 824 Gene3D G3DSA:3.40.50.300 127 280 1.1E-38 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS25385 ce11ff28c12394028f31d856c1873cba 355 Gene3D G3DSA:1.20.1170.10 143 351 7.8E-5 T 13-09-2016 PMA3_RS25385 ce11ff28c12394028f31d856c1873cba 355 SUPERFAMILY SSF58100 20 352 3.66E-23 T 13-09-2016 PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PANTHER PTHR24322 10 129 3.9E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PANTHER PTHR24322 147 183 3.9E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 Gene3D G3DSA:3.40.50.720 5 233 1.5E-65 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 SUPERFAMILY SSF51735 5 234 4.96E-66 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 232 3.5E-49 T 13-09-2016 PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 7.8E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 7.8E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.8E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 7.8E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 7.8E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 218 7.8E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 3.8E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.8E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS00975 b742c95c578648cc25a7f9ff5a42012f 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.8E-8 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS07540 5b752bfa47baed5683b1e06aec96a8d7 202 Gene3D G3DSA:1.10.760.10 15 195 1.1E-37 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07540 5b752bfa47baed5683b1e06aec96a8d7 202 SUPERFAMILY SSF46626 15 195 4.07E-30 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07540 5b752bfa47baed5683b1e06aec96a8d7 202 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 180 9.7E-81 T 13-09-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PMA3_RS07540 5b752bfa47baed5683b1e06aec96a8d7 202 PANTHER PTHR10422:SF23 15 159 1.1E-88 T 13-09-2016 PMA3_RS07540 5b752bfa47baed5683b1e06aec96a8d7 202 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 4 179 3.3E-82 T 13-09-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PMA3_RS07540 5b752bfa47baed5683b1e06aec96a8d7 202 PANTHER PTHR10422 15 159 1.1E-88 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS29335 5aa83ae9434ed34443d0a084da92756f 175 PANTHER PTHR36180:SF2 2 154 5.4E-15 T 13-09-2016 PMA3_RS29335 5aa83ae9434ed34443d0a084da92756f 175 Pfam PF02498 BRO family, N-terminal domain 25 104 8.6E-12 T 13-09-2016 IPR003497 BRO N-terminal domain PMA3_RS29335 5aa83ae9434ed34443d0a084da92756f 175 PANTHER PTHR36180 2 154 5.4E-15 T 13-09-2016 PMA3_RS29335 5aa83ae9434ed34443d0a084da92756f 175 SMART SM01040 19 104 6.5E-20 T 13-09-2016 IPR003497 BRO N-terminal domain PMA3_RS22410 d4a127653b55b0e1e6fb3d8ef16faf78 95 Gene3D G3DSA:3.40.630.30 5 79 9.3E-11 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22410 d4a127653b55b0e1e6fb3d8ef16faf78 95 SUPERFAMILY SSF55729 5 68 2.34E-10 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22410 d4a127653b55b0e1e6fb3d8ef16faf78 95 Pfam PF13673 Acetyltransferase (GNAT) domain 12 79 5.8E-9 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 PANTHER PTHR36918:SF1 1 157 6.7E-81 T 13-09-2016 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 Hamap MF_00821 Protein-export protein SecB [secB]. 1 152 33.249 T 13-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 20 37 1.4E-37 T 13-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 130 148 1.4E-37 T 13-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 80 100 1.4E-37 T 13-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 104 126 1.4E-37 T 13-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 Pfam PF02556 Preprotein translocase subunit SecB 12 150 1.0E-54 T 13-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 12 147 2.9E-55 T 13-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 PANTHER PTHR36918 1 157 6.7E-81 T 13-09-2016 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 Gene3D G3DSA:3.10.420.10 10 156 6.8E-58 T 13-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PMA3_RS01145 ab6b812fa2dc4162bdf11f5ca81cdfa8 161 SUPERFAMILY SSF54611 6 149 7.19E-54 T 13-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PMA3_RS13750 276da7e8f81d26c5383927c7679740d7 140 Pfam PF02974 Protease inhibitor Inh 35 135 3.2E-11 T 13-09-2016 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 PMA3_RS13750 276da7e8f81d26c5383927c7679740d7 140 Gene3D G3DSA:2.40.128.10 29 136 7.4E-28 T 13-09-2016 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 PMA3_RS13750 276da7e8f81d26c5383927c7679740d7 140 SUPERFAMILY SSF50882 29 135 1.05E-18 T 13-09-2016 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 PMA3_RS13750 276da7e8f81d26c5383927c7679740d7 140 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 40 134 1.0E-32 T 13-09-2016 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 PMA3_RS14015 2545029532075418fe7dff6adfb024bf 222 SUPERFAMILY SSF52218 1 204 9.03E-48 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS14015 2545029532075418fe7dff6adfb024bf 222 PANTHER PTHR10204 1 214 1.6E-47 T 13-09-2016 PMA3_RS14015 2545029532075418fe7dff6adfb024bf 222 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 208 25.531 T 13-09-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 PMA3_RS14015 2545029532075418fe7dff6adfb024bf 222 PANTHER PTHR10204:SF16 1 214 1.6E-47 T 13-09-2016 PMA3_RS14015 2545029532075418fe7dff6adfb024bf 222 Gene3D G3DSA:3.40.50.360 1 207 5.0E-59 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS14015 2545029532075418fe7dff6adfb024bf 222 Pfam PF02525 Flavodoxin-like fold 3 201 1.1E-42 T 13-09-2016 IPR003680 Flavodoxin-like fold PMA3_RS01575 9e382aa8e1feb2d35e41952fce4a2790 292 Pfam PF02592 Putative vitamin uptake transporter 120 276 3.2E-34 T 13-09-2016 IPR003744 Protein of unknown function DUF165 PMA3_RS01575 9e382aa8e1feb2d35e41952fce4a2790 292 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 90 284 1.0E-26 T 13-09-2016 IPR003744 Protein of unknown function DUF165 PMA3_RS01575 9e382aa8e1feb2d35e41952fce4a2790 292 PANTHER PTHR34300 70 287 3.0E-29 T 13-09-2016 PMA3_RS24385 1311a1d9d9931aacd4fae66241aec3d0 73 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 66 3.8E-24 T 13-09-2016 IPR021074 Formate dehydrogenase, delta subunit PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 PANTHER PTHR12563:SF14 1 130 0.0 T 13-09-2016 PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 PANTHER PTHR12563:SF14 149 823 0.0 T 13-09-2016 PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 SUPERFAMILY SSF69593 241 521 1.83E-39 T 13-09-2016 PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 15 816 30.291 T 13-09-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 PIRSF PIRSF000437 21 826 6.1E-301 T 13-09-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 PANTHER PTHR12563 1 130 0.0 T 13-09-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 PANTHER PTHR12563 149 823 0.0 T 13-09-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 PIRSF PIRSF500064 4 827 0.0 T 13-09-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 Pfam PF01553 Acyltransferase 291 428 2.0E-21 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 14 812 0.0 T 13-09-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PMA3_RS04750 cc2d8bd696b6e37031cc241d721f9900 830 SMART SM00563 304 431 5.6E-27 T 13-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PMA3_RS22655 9f4f270ef49fa1dde77f077f39ae9c59 64 Pfam PF14375 Cysteine-rich CWC 7 59 8.8E-15 T 13-09-2016 IPR032720 Cysteine-rich CWC PMA3_RS06610 93b82590b5193b25b95e4be5e721e211 301 SUPERFAMILY SSF56349 138 265 5.89E-12 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS06610 93b82590b5193b25b95e4be5e721e211 301 Gene3D G3DSA:1.10.443.10 138 265 5.2E-10 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS04870 ad9693c313ac5d0ec4f227823757dc5f 167 SMART SM00935 10 164 4.0E-36 T 13-09-2016 IPR005632 Chaperone protein Skp GO:0051082 PMA3_RS04870 ad9693c313ac5d0ec4f227823757dc5f 167 PANTHER PTHR35089 2 165 6.7E-40 T 13-09-2016 PMA3_RS04870 ad9693c313ac5d0ec4f227823757dc5f 167 Pfam PF03938 Outer membrane protein (OmpH-like) 8 163 8.1E-23 T 13-09-2016 IPR005632 Chaperone protein Skp GO:0051082 PMA3_RS04870 ad9693c313ac5d0ec4f227823757dc5f 167 Gene3D G3DSA:3.30.910.20 13 58 3.2E-16 T 13-09-2016 PMA3_RS04870 ad9693c313ac5d0ec4f227823757dc5f 167 Gene3D G3DSA:3.30.910.20 96 164 3.2E-16 T 13-09-2016 PMA3_RS04870 ad9693c313ac5d0ec4f227823757dc5f 167 PANTHER PTHR35089:SF1 2 165 6.7E-40 T 13-09-2016 PMA3_RS04870 ad9693c313ac5d0ec4f227823757dc5f 167 SUPERFAMILY SSF111384 21 164 1.27E-28 T 13-09-2016 IPR024930 Skp domain PMA3_RS01445 eea7cc04090c971e4e020c64c0c53f31 235 Gene3D G3DSA:3.30.70.1070 156 229 5.9E-21 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS01445 eea7cc04090c971e4e020c64c0c53f31 235 SUPERFAMILY SSF110997 158 229 1.57E-16 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS01445 eea7cc04090c971e4e020c64c0c53f31 235 Pfam PF05036 Sporulation related domain 157 225 1.9E-17 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.2E-21 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 Pfam PF03466 LysR substrate binding domain 91 291 1.2E-36 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 SUPERFAMILY SSF53850 91 294 6.52E-34 T 13-09-2016 PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 PANTHER PTHR30346 1 309 6.2E-101 T 13-09-2016 PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 Gene3D G3DSA:3.40.190.10 175 261 1.2E-13 T 13-09-2016 PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 SUPERFAMILY SSF46785 1 87 4.04E-24 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 PANTHER PTHR30346:SF3 1 309 6.2E-101 T 13-09-2016 PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 Gene3D G3DSA:3.40.190.10 92 174 3.6E-19 T 13-09-2016 PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 Gene3D G3DSA:1.10.10.10 1 87 1.0E-28 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.6E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.6E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS27750 f3e7f563c22c2ca028e4ec03b16319a5 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.6E-10 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS14610 eb93e4ec640482f063ea99542bba9a7f 442 PANTHER PTHR23511:SF10 6 437 1.1E-76 T 13-09-2016 PMA3_RS14610 eb93e4ec640482f063ea99542bba9a7f 442 PANTHER PTHR23511 6 437 1.1E-76 T 13-09-2016 PMA3_RS14610 eb93e4ec640482f063ea99542bba9a7f 442 SUPERFAMILY SSF103473 9 436 1.44E-68 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS14610 eb93e4ec640482f063ea99542bba9a7f 442 Pfam PF00083 Sugar (and other) transporter 50 439 1.2E-50 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS14610 eb93e4ec640482f063ea99542bba9a7f 442 Gene3D G3DSA:1.20.1250.20 21 203 3.1E-22 T 13-09-2016 PMA3_RS14610 eb93e4ec640482f063ea99542bba9a7f 442 Gene3D G3DSA:1.20.1250.20 250 432 7.5E-21 T 13-09-2016 PMA3_RS17570 8e46ceb6b6ea3749c43bfd333567f8aa 422 Pfam PF01548 Transposase 13 168 2.9E-25 T 13-09-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PMA3_RS17570 8e46ceb6b6ea3749c43bfd333567f8aa 422 Pfam PF02371 Transposase IS116/IS110/IS902 family 278 362 2.1E-12 T 13-09-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PMA3_RS17570 8e46ceb6b6ea3749c43bfd333567f8aa 422 PANTHER PTHR40760 5 410 8.3E-32 T 13-09-2016 PMA3_RS03880 a21374c8137caa8715033aea173b2f95 194 Pfam PF03923 Uncharacterized lipoprotein 31 192 2.5E-11 T 13-09-2016 IPR005619 Uncharacterised protein family, YajG PMA3_RS24295 49f008387fa2b9e3644f7f2eac7c5982 182 PANTHER PTHR35603 2 179 5.1E-83 T 13-09-2016 PMA3_RS24295 49f008387fa2b9e3644f7f2eac7c5982 182 Pfam PF05433 Glycine zipper 2TM domain 73 113 3.5E-10 T 13-09-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 PMA3_RS24295 49f008387fa2b9e3644f7f2eac7c5982 182 PANTHER PTHR35603:SF2 2 179 5.1E-83 T 13-09-2016 PMA3_RS14010 3a8fe495b8c51240503223c57149f706 451 PANTHER PTHR11895 1 451 1.6E-80 T 13-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS14010 3a8fe495b8c51240503223c57149f706 451 Gene3D G3DSA:3.90.1300.10 4 443 3.5E-91 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS14010 3a8fe495b8c51240503223c57149f706 451 Pfam PF01425 Amidase 27 434 1.7E-63 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS14010 3a8fe495b8c51240503223c57149f706 451 SUPERFAMILY SSF75304 3 444 7.06E-86 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS10015 b1d39720063e4e006dc2a11bda126707 116 PANTHER PTHR33271 46 115 5.6E-19 T 13-09-2016 PMA3_RS10015 b1d39720063e4e006dc2a11bda126707 116 SUPERFAMILY SSF51182 27 115 5.73E-15 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS10015 b1d39720063e4e006dc2a11bda126707 116 Pfam PF05899 Protein of unknown function (DUF861) 46 113 3.7E-22 T 13-09-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PMA3_RS10015 b1d39720063e4e006dc2a11bda126707 116 Gene3D G3DSA:2.60.120.10 37 116 4.2E-24 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS20240 e90b4df3a7c1bbb36248499c288ba9a1 133 PANTHER PTHR39176 25 132 1.6E-16 T 13-09-2016 PMA3_RS20240 e90b4df3a7c1bbb36248499c288ba9a1 133 Pfam PF07007 Protein of unknown function (DUF1311) 23 113 2.4E-20 T 13-09-2016 IPR009739 Protein of unknown function DUF1311 PMA3_RS21920 8fc1d5ff8a37ac4f3c5049a6f2db73a5 148 PANTHER PTHR38102 2 148 2.3E-16 T 13-09-2016 PMA3_RS19290 081433261342894e2f3005687efeb7e9 351 Pfam PF02615 Malate/L-lactate dehydrogenase 8 338 1.4E-82 T 13-09-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS19290 081433261342894e2f3005687efeb7e9 351 PANTHER PTHR11091 1 348 1.6E-52 T 13-09-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS19290 081433261342894e2f3005687efeb7e9 351 SUPERFAMILY SSF89733 6 348 3.01E-82 T 13-09-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS19290 081433261342894e2f3005687efeb7e9 351 Gene3D G3DSA:1.10.1530.10 6 79 1.7E-14 T 13-09-2016 PMA3_RS19290 081433261342894e2f3005687efeb7e9 351 Gene3D G3DSA:3.30.1370.60 80 277 9.0E-51 T 13-09-2016 PMA3_RS03300 772a92fbda21886c63e6c140e1bf0fe1 239 Gene3D G3DSA:3.60.140.10 2 239 2.6E-97 T 13-09-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PMA3_RS03300 772a92fbda21886c63e6c140e1bf0fe1 239 SUPERFAMILY SSF64438 3 239 1.23E-84 T 13-09-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic PMA3_RS03300 772a92fbda21886c63e6c140e1bf0fe1 239 PANTHER PTHR30616 1 239 2.7E-125 T 13-09-2016 PMA3_RS03300 772a92fbda21886c63e6c140e1bf0fe1 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 238 2.3E-73 T 13-09-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PMA3_RS03300 772a92fbda21886c63e6c140e1bf0fe1 239 PANTHER PTHR30616:SF3 1 239 2.7E-125 T 13-09-2016 PMA3_RS03300 772a92fbda21886c63e6c140e1bf0fe1 239 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 239 2.4E-59 T 13-09-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PMA3_RS13240 5abc39bdd44df1c42c6c6d24319810a2 226 Pfam PF03412 Peptidase C39 family 47 178 1.2E-18 T 13-09-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PMA3_RS13240 5abc39bdd44df1c42c6c6d24319810a2 226 Gene3D G3DSA:3.90.70.10 56 180 5.3E-9 T 13-09-2016 PMA3_RS20185 3915411ad843d20dc9a0a0dbe23f9e8c 318 PANTHER PTHR23024 46 312 9.3E-77 T 13-09-2016 PMA3_RS20185 3915411ad843d20dc9a0a0dbe23f9e8c 318 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 85 101 - T 13-09-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 PMA3_RS20185 3915411ad843d20dc9a0a0dbe23f9e8c 318 PANTHER PTHR23024:SF207 46 312 9.3E-77 T 13-09-2016 PMA3_RS20185 3915411ad843d20dc9a0a0dbe23f9e8c 318 Gene3D G3DSA:3.40.50.1820 17 316 1.2E-87 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS20185 3915411ad843d20dc9a0a0dbe23f9e8c 318 SUPERFAMILY SSF53474 47 316 6.31E-68 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS20185 3915411ad843d20dc9a0a0dbe23f9e8c 318 Pfam PF07859 alpha/beta hydrolase fold 85 294 4.9E-69 T 13-09-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 PMA3_RS22450 b12224990c87876adcd93a9ad19f0996 163 Pfam PF11086 Protein of unknown function (DUF2878) 7 154 1.0E-34 T 13-09-2016 IPR021306 Protein of unknown function DUF2878 PMA3_RS22835 5444e2c5e14ac4c7aaf1a2bf9ce58dee 127 Gene3D G3DSA:1.10.260.40 7 55 1.5E-5 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS22835 5444e2c5e14ac4c7aaf1a2bf9ce58dee 127 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 3 56 1.2E-12 T 13-09-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 PMA3_RS24310 819561b9236dbd233c31d614ad574e1c 111 PANTHER PTHR33909:SF1 1 111 2.2E-35 T 13-09-2016 PMA3_RS24310 819561b9236dbd233c31d614ad574e1c 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 43 4.9E-12 T 13-09-2016 IPR003849 Preprotein translocase YajC PMA3_RS24310 819561b9236dbd233c31d614ad574e1c 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 61 79 4.9E-12 T 13-09-2016 IPR003849 Preprotein translocase YajC PMA3_RS24310 819561b9236dbd233c31d614ad574e1c 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 26 103 9.5E-29 T 13-09-2016 IPR003849 Preprotein translocase YajC PMA3_RS24310 819561b9236dbd233c31d614ad574e1c 111 PANTHER PTHR33909 1 111 2.2E-35 T 13-09-2016 PMA3_RS24310 819561b9236dbd233c31d614ad574e1c 111 Pfam PF02699 Preprotein translocase subunit 27 100 2.2E-28 T 13-09-2016 IPR003849 Preprotein translocase YajC PMA3_RS24310 819561b9236dbd233c31d614ad574e1c 111 SMART SM01323 21 103 1.6E-41 T 13-09-2016 IPR003849 Preprotein translocase YajC PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 Gene3D G3DSA:1.20.200.10 144 422 8.0E-89 T 13-09-2016 PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 13-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 PANTHER PTHR11444 1 468 1.1E-268 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 Gene3D G3DSA:1.10.275.10 6 143 1.1E-54 T 13-09-2016 IPR024083 Fumarase/histidase, N-terminal PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 Pfam PF00206 Lyase 16 347 1.5E-113 T 13-09-2016 IPR022761 Fumarate lyase, N-terminal PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 SUPERFAMILY SSF48557 7 465 7.23E-143 T 13-09-2016 IPR008948 L-Aspartase-like GO:0003824 PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 PANTHER PTHR11444:SF25 1 468 1.1E-268 T 13-09-2016 PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 Pfam PF10415 Fumarase C C-terminus 413 465 1.5E-19 T 13-09-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 8 468 3.2E-206 T 13-09-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 1.3E-28 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.3E-28 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 1.3E-28 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 1.3E-28 T 13-09-2016 IPR000362 Fumarate lyase family PMA3_RS29760 c3e1c459c30172cfde756ce7d97b60ef 474 Gene3D G3DSA:1.10.40.30 423 468 1.7E-20 T 13-09-2016 PMA3_RS15465 07a7caf62fca2917a5170eda1754197d 198 Pfam PF01810 LysE type translocator 14 194 6.0E-26 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS15465 07a7caf62fca2917a5170eda1754197d 198 PANTHER PTHR30086:SF12 1 194 9.9E-46 T 13-09-2016 PMA3_RS15465 07a7caf62fca2917a5170eda1754197d 198 PANTHER PTHR30086 1 194 9.9E-46 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS16745 e67664ba6b01e1cf0e6993bf694cd1a5 333 PANTHER PTHR30238 6 327 9.6E-151 T 13-09-2016 PMA3_RS16745 e67664ba6b01e1cf0e6993bf694cd1a5 333 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 8 313 2.1E-125 T 13-09-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 PMA3_RS16745 e67664ba6b01e1cf0e6993bf694cd1a5 333 Pfam PF03741 Integral membrane protein TerC family 82 284 2.5E-57 T 13-09-2016 IPR005496 Integral membrane protein TerC GO:0016021 PMA3_RS16745 e67664ba6b01e1cf0e6993bf694cd1a5 333 PANTHER PTHR30238:SF0 6 327 9.6E-151 T 13-09-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 PMA3_RS11375 d50c2eb35e1e130e88228c4cf34ff250 496 SUPERFAMILY SSF56399 327 490 8.22E-27 T 13-09-2016 PMA3_RS11375 d50c2eb35e1e130e88228c4cf34ff250 496 Pfam PF01129 NAD:arginine ADP-ribosyltransferase 327 486 1.1E-7 T 13-09-2016 IPR000768 NAD:arginine ADP-ribosyltransferase, ART GO:0003956|GO:0006471 PMA3_RS11375 d50c2eb35e1e130e88228c4cf34ff250 496 Gene3D G3DSA:3.90.176.10 344 482 2.1E-17 T 13-09-2016 PMA3_RS02440 4c9926e48d235fa351a34b80eeb7dc7e 458 Pfam PF03413 Peptidase propeptide and YPEB domain 284 340 5.2E-5 T 13-09-2016 IPR025711 PepSY domain PMA3_RS02440 4c9926e48d235fa351a34b80eeb7dc7e 458 PANTHER PTHR34219 245 453 3.5E-176 T 13-09-2016 PMA3_RS02440 4c9926e48d235fa351a34b80eeb7dc7e 458 PANTHER PTHR34219 3 221 3.5E-176 T 13-09-2016 PMA3_RS02440 4c9926e48d235fa351a34b80eeb7dc7e 458 Pfam PF03929 PepSY-associated TM region 13 395 6.5E-62 T 13-09-2016 IPR005625 PepSY-associated TM protein PMA3_RS02440 4c9926e48d235fa351a34b80eeb7dc7e 458 PANTHER PTHR34219:SF2 3 221 3.5E-176 T 13-09-2016 PMA3_RS02440 4c9926e48d235fa351a34b80eeb7dc7e 458 PANTHER PTHR34219:SF2 245 453 3.5E-176 T 13-09-2016 PMA3_RS09905 ade1024f7af46068a3f34dc2df337822 200 Pfam PF08241 Methyltransferase domain 41 92 2.3E-10 T 13-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PMA3_RS09905 ade1024f7af46068a3f34dc2df337822 200 Gene3D G3DSA:3.40.50.150 41 164 2.2E-14 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS09905 ade1024f7af46068a3f34dc2df337822 200 SUPERFAMILY SSF53335 41 169 1.84E-14 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS24600 1e56a210eb206a0cf92313692e621813 260 PANTHER PTHR30283:SF3 2 260 8.5E-121 T 13-09-2016 PMA3_RS24600 1e56a210eb206a0cf92313692e621813 260 PANTHER PTHR30283 2 260 8.5E-121 T 13-09-2016 PMA3_RS24600 1e56a210eb206a0cf92313692e621813 260 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.97 T 13-09-2016 IPR005583 Peroxide stress protein YaaA PMA3_RS24600 1e56a210eb206a0cf92313692e621813 260 Pfam PF03883 Protein of unknown function (DUF328) 1 243 6.9E-90 T 13-09-2016 IPR005583 Peroxide stress protein YaaA PMA3_RS02470 4740bbb4b781a39cb6e030413f77862d 111 PANTHER PTHR41791:SF1 7 103 1.1E-18 T 13-09-2016 PMA3_RS02470 4740bbb4b781a39cb6e030413f77862d 111 PIRSF PIRSF028744 2 105 4.1E-31 T 13-09-2016 IPR014056 Addiction module killer protein, predicted PMA3_RS02470 4740bbb4b781a39cb6e030413f77862d 111 PANTHER PTHR41791 7 103 1.1E-18 T 13-09-2016 PMA3_RS02470 4740bbb4b781a39cb6e030413f77862d 111 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 11 99 1.6E-26 T 13-09-2016 IPR014056 Addiction module killer protein, predicted PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 Pfam PF00375 Sodium:dicarboxylate symporter family 17 396 2.2E-62 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 7.9E-16 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 7.9E-16 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 7.9E-16 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 7.9E-16 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 7.9E-16 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 PANTHER PTHR11958 9 405 3.9E-242 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 PANTHER PTHR11958:SF68 9 405 3.9E-242 T 13-09-2016 PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 SUPERFAMILY SSF118215 17 397 2.48E-94 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.572 T 13-09-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 PMA3_RS08075 6063c9f62aa296ea5fffa0ae872094bb 410 Gene3D G3DSA:1.10.3860.10 11 399 3.5E-82 T 13-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PMA3_RS22205 7b3b759a4dd50b64347920e7cd7230c3 331 Gene3D G3DSA:3.90.850.10 132 310 2.1E-7 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS22205 7b3b759a4dd50b64347920e7cd7230c3 331 PIRSF PIRSF033905 1 331 3.0E-164 T 13-09-2016 IPR009645 Uncharacterised conserved protein GguC PMA3_RS22205 7b3b759a4dd50b64347920e7cd7230c3 331 SUPERFAMILY SSF56529 110 316 1.24E-27 T 13-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PMA3_RS17805 48d4d1376d2bdba278098233c148be73 246 PANTHER PTHR34979 6 237 4.3E-36 T 13-09-2016 PMA3_RS17805 48d4d1376d2bdba278098233c148be73 246 Pfam PF03591 AzlC protein 19 161 8.7E-34 T 13-09-2016 IPR011606 Branched-chain amino acid transport, permease PMA3_RS13805 0a52737353c55b986a0bb5f4f414aa8b 158 PANTHER PTHR35585 1 150 2.0E-32 T 13-09-2016 PMA3_RS13805 0a52737353c55b986a0bb5f4f414aa8b 158 Pfam PF01814 Hemerythrin HHE cation binding domain 3 124 2.6E-17 T 13-09-2016 IPR012312 Haemerythrin-like PMA3_RS13805 0a52737353c55b986a0bb5f4f414aa8b 158 PANTHER PTHR35585:SF1 1 150 2.0E-32 T 13-09-2016 PMA3_RS13805 0a52737353c55b986a0bb5f4f414aa8b 158 Gene3D G3DSA:1.20.120.520 3 142 5.2E-14 T 13-09-2016 PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 SUPERFAMILY SSF53850 97 303 1.63E-37 T 13-09-2016 PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 5 301 7.4E-119 T 13-09-2016 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 Pfam PF03466 LysR substrate binding domain 97 299 3.1E-35 T 13-09-2016 IPR005119 LysR, substrate-binding PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.4E-18 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 Gene3D G3DSA:3.40.190.10 187 267 2.9E-9 T 13-09-2016 PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 Gene3D G3DSA:1.10.10.10 6 86 3.6E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 PANTHER PTHR30346 7 302 5.0E-142 T 13-09-2016 PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.2E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.2E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.2E-5 T 13-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 SUPERFAMILY SSF46785 5 115 1.53E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 Gene3D G3DSA:3.40.190.10 97 186 6.9E-20 T 13-09-2016 PMA3_RS09875 5e0e1856859776f6539da0e771b19900 309 PANTHER PTHR30346:SF11 7 302 5.0E-142 T 13-09-2016 PMA3_RS30155 139849fd8d4aeb91d68a090d94987235 104 SUPERFAMILY SSF48452 3 83 2.04E-14 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS30155 139849fd8d4aeb91d68a090d94987235 104 Pfam PF13428 Tetratricopeptide repeat 20 58 1.8E-5 T 13-09-2016 PMA3_RS30155 139849fd8d4aeb91d68a090d94987235 104 Gene3D G3DSA:1.25.40.10 3 83 7.2E-15 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS30155 139849fd8d4aeb91d68a090d94987235 104 SMART SM00028 16 49 0.017 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS30155 139849fd8d4aeb91d68a090d94987235 104 SMART SM00028 50 83 0.062 T 13-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PMA3_RS01920 ebc78c4e0e6207d0ebcd33f4686ea102 248 Pfam PF11738 Protein of unknown function (DUF3298) 182 232 9.4E-6 T 13-09-2016 IPR021729 Domain of unknown function DUF3298 PMA3_RS01920 ebc78c4e0e6207d0ebcd33f4686ea102 248 Gene3D G3DSA:3.30.565.40 42 153 2.6E-8 T 13-09-2016 IPR025303 Domain of unknown function DUF4163 PMA3_RS01920 ebc78c4e0e6207d0ebcd33f4686ea102 248 Gene3D G3DSA:3.90.640.20 157 244 1.5E-11 T 13-09-2016 IPR021729 Domain of unknown function DUF3298 PMA3_RS21815 ed95a2cdf7f9ecbf711ab413e2fd54a7 245 PANTHER PTHR30435 1 245 1.5E-89 T 13-09-2016 PMA3_RS21815 ed95a2cdf7f9ecbf711ab413e2fd54a7 245 SUPERFAMILY SSF117143 77 204 1.7E-16 T 13-09-2016 PMA3_RS21815 ed95a2cdf7f9ecbf711ab413e2fd54a7 245 PANTHER PTHR30435:SF18 1 245 1.5E-89 T 13-09-2016 PMA3_RS21815 ed95a2cdf7f9ecbf711ab413e2fd54a7 245 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 121 3.3E-30 T 13-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PMA3_RS21815 ed95a2cdf7f9ecbf711ab413e2fd54a7 245 Pfam PF00460 Flagella basal body rod protein 5 35 3.2E-7 T 13-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PMA3_RS21815 ed95a2cdf7f9ecbf711ab413e2fd54a7 245 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 240 5.0E-18 T 13-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PMA3_RS14225 9366054904328d3fb409e5d279097b89 185 SUPERFAMILY SSF52096 3 169 3.79E-22 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS14225 9366054904328d3fb409e5d279097b89 185 Pfam PF00574 Clp protease 4 167 6.4E-11 T 13-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PMA3_RS14225 9366054904328d3fb409e5d279097b89 185 Gene3D G3DSA:3.90.226.10 2 167 1.3E-14 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS22455 feef04c6c2f566153acd7318ee466405 178 Pfam PF12915 Protein of unknown function (DUF3833) 11 172 7.1E-68 T 13-09-2016 IPR024409 Protein of unknown function DUF3833 PMA3_RS24870 55214b6c5d522579a3be3abf07dbff7c 151 Gene3D G3DSA:3.40.50.360 1 149 2.1E-29 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS24870 55214b6c5d522579a3be3abf07dbff7c 151 PANTHER PTHR19384 1 150 7.7E-14 T 13-09-2016 PMA3_RS24870 55214b6c5d522579a3be3abf07dbff7c 151 SUPERFAMILY SSF52218 1 149 1.06E-32 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS24870 55214b6c5d522579a3be3abf07dbff7c 151 Pfam PF00258 Flavodoxin 5 141 2.6E-16 T 13-09-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PMA3_RS30250 85226ea8d247f7161eb3924685a24f82 255 PANTHER PTHR30060 1 242 1.4E-118 T 13-09-2016 PMA3_RS30250 85226ea8d247f7161eb3924685a24f82 255 PANTHER PTHR30060:SF1 1 242 1.4E-118 T 13-09-2016 PMA3_RS30250 85226ea8d247f7161eb3924685a24f82 255 Pfam PF03741 Integral membrane protein TerC family 14 204 2.2E-52 T 13-09-2016 IPR005496 Integral membrane protein TerC GO:0016021 PMA3_RS28860 9860b3e4eacd06605b73f45b90794eb6 213 Pfam PF01966 HD domain 32 117 2.0E-7 T 13-09-2016 IPR006674 HD domain PMA3_RS28860 9860b3e4eacd06605b73f45b90794eb6 213 PANTHER PTHR35569 1 213 1.8E-79 T 13-09-2016 PMA3_RS28860 9860b3e4eacd06605b73f45b90794eb6 213 SUPERFAMILY SSF109604 21 121 2.48E-13 T 13-09-2016 PMA3_RS28860 9860b3e4eacd06605b73f45b90794eb6 213 PANTHER PTHR35569:SF1 1 213 1.8E-79 T 13-09-2016 PMA3_RS28860 9860b3e4eacd06605b73f45b90794eb6 213 Gene3D G3DSA:1.10.3210.10 20 129 7.8E-9 T 13-09-2016 IPR006674 HD domain PMA3_RS19255 ba48255ea6433e697040ff310d44d157 146 PANTHER PTHR10057 24 146 9.2E-28 T 13-09-2016 IPR004307 TspO/MBR-related protein GO:0016021 PMA3_RS19255 ba48255ea6433e697040ff310d44d157 146 PIRSF PIRSF005859 1 146 2.4E-42 T 13-09-2016 IPR004307 TspO/MBR-related protein GO:0016021 PMA3_RS19255 ba48255ea6433e697040ff310d44d157 146 Pfam PF03073 TspO/MBR family 6 142 4.7E-34 T 13-09-2016 IPR004307 TspO/MBR-related protein GO:0016021 PMA3_RS17155 1468447b296566ed118cbeb59f7041d5 275 SUPERFAMILY SSF161098 67 266 9.42E-25 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17155 1468447b296566ed118cbeb59f7041d5 275 PANTHER PTHR30043 1 274 2.5E-84 T 13-09-2016 PMA3_RS17155 1468447b296566ed118cbeb59f7041d5 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 271 6.9E-11 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17155 1468447b296566ed118cbeb59f7041d5 275 Gene3D G3DSA:1.10.3720.10 67 274 5.0E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17155 1468447b296566ed118cbeb59f7041d5 275 PANTHER PTHR30043:SF1 1 274 2.5E-84 T 13-09-2016 PMA3_RS03945 b4533a9cec3343f30a2e0e78b2c2c88a 454 Pfam PF07044 Protein of unknown function (DUF1329) 84 449 6.9E-158 T 13-09-2016 IPR010752 Protein of unknown function DUF1329 PMA3_RS03945 b4533a9cec3343f30a2e0e78b2c2c88a 454 Gene3D G3DSA:2.50.20.10 160 308 5.8E-39 T 13-09-2016 PMA3_RS03945 b4533a9cec3343f30a2e0e78b2c2c88a 454 Gene3D G3DSA:2.50.20.10 341 449 5.8E-39 T 13-09-2016 PMA3_RS15215 70a4fe0298fb47ef3dc96a5618339dcc 198 SUPERFAMILY SSF47616 83 195 6.54E-20 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS15215 70a4fe0298fb47ef3dc96a5618339dcc 198 Gene3D G3DSA:3.40.30.10 3 91 3.8E-25 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS15215 70a4fe0298fb47ef3dc96a5618339dcc 198 Gene3D G3DSA:1.20.1050.10 92 197 3.3E-16 T 13-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like PMA3_RS15215 70a4fe0298fb47ef3dc96a5618339dcc 198 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 73 3.1E-20 T 13-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PMA3_RS15215 70a4fe0298fb47ef3dc96a5618339dcc 198 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 189 5.1E-8 T 13-09-2016 IPR004046 Glutathione S-transferase, C-terminal PMA3_RS15215 70a4fe0298fb47ef3dc96a5618339dcc 198 PANTHER PTHR11260 3 196 5.7E-22 T 13-09-2016 PMA3_RS15215 70a4fe0298fb47ef3dc96a5618339dcc 198 SUPERFAMILY SSF52833 2 102 2.24E-23 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS09920 740e625c72871f9c55671b37b7b495a6 306 PANTHER PTHR31964:SF41 1 88 1.4E-14 T 13-09-2016 PMA3_RS09920 740e625c72871f9c55671b37b7b495a6 306 Gene3D G3DSA:3.40.50.620 9 145 9.7E-12 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS09920 740e625c72871f9c55671b37b7b495a6 306 PANTHER PTHR31964:SF41 247 305 1.4E-14 T 13-09-2016 PMA3_RS09920 740e625c72871f9c55671b37b7b495a6 306 SUPERFAMILY SSF52402 17 145 4.69E-14 T 13-09-2016 PMA3_RS09920 740e625c72871f9c55671b37b7b495a6 306 SUPERFAMILY SSF52402 154 303 4.69E-21 T 13-09-2016 PMA3_RS09920 740e625c72871f9c55671b37b7b495a6 306 PANTHER PTHR31964 1 88 1.4E-14 T 13-09-2016 PMA3_RS09920 740e625c72871f9c55671b37b7b495a6 306 PANTHER PTHR31964 247 305 1.4E-14 T 13-09-2016 PMA3_RS09920 740e625c72871f9c55671b37b7b495a6 306 Pfam PF00582 Universal stress protein family 19 145 1.0E-7 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS09920 740e625c72871f9c55671b37b7b495a6 306 Pfam PF00582 Universal stress protein family 154 301 3.4E-16 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS09920 740e625c72871f9c55671b37b7b495a6 306 Gene3D G3DSA:3.40.50.620 154 304 9.6E-24 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS22325 4958d9661f24c8e7b8160f39294d3f40 228 PANTHER PTHR11558 63 213 1.3E-38 T 13-09-2016 PMA3_RS22325 4958d9661f24c8e7b8160f39294d3f40 228 Gene3D G3DSA:3.40.50.150 65 207 4.1E-23 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS22325 4958d9661f24c8e7b8160f39294d3f40 228 Pfam PF01564 Spermine/spermidine synthase 38 183 1.5E-6 T 13-09-2016 PMA3_RS22325 4958d9661f24c8e7b8160f39294d3f40 228 PANTHER PTHR11558:SF4 63 213 1.3E-38 T 13-09-2016 PMA3_RS22325 4958d9661f24c8e7b8160f39294d3f40 228 SUPERFAMILY SSF53335 36 223 3.29E-26 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS16310 aaec687e49c350a84299dc5b88b944d4 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 181 264 4.0E-28 T 13-09-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal PMA3_RS16310 aaec687e49c350a84299dc5b88b944d4 267 SUPERFAMILY SSF52540 28 203 1.44E-33 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16310 aaec687e49c350a84299dc5b88b944d4 267 Pfam PF07728 AAA domain (dynein-related subfamily) 34 168 8.3E-35 T 13-09-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PMA3_RS16310 aaec687e49c350a84299dc5b88b944d4 267 Gene3D G3DSA:3.40.50.300 26 185 1.7E-31 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS16310 aaec687e49c350a84299dc5b88b944d4 267 PANTHER PTHR22908 23 252 1.1E-48 T 13-09-2016 PMA3_RS10555 e97a11bb5658e1b073ab9f9443895bae 227 PANTHER PTHR38033 15 224 2.5E-39 T 13-09-2016 PMA3_RS10555 e97a11bb5658e1b073ab9f9443895bae 227 PANTHER PTHR38033:SF1 15 224 2.5E-39 T 13-09-2016 PMA3_RS10555 e97a11bb5658e1b073ab9f9443895bae 227 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 16 214 1.0E-40 T 13-09-2016 IPR017732 Type IV / VI secretion system, DotU PMA3_RS10555 e97a11bb5658e1b073ab9f9443895bae 227 Pfam PF09850 Type VI secretion system protein DotU 16 211 2.5E-43 T 13-09-2016 IPR017732 Type IV / VI secretion system, DotU PMA3_RS16260 2e005269e632b41c9cb743304c9b9705 224 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 10 217 1.1E-72 T 13-09-2016 IPR019903 Repair of iron centres family PMA3_RS16260 2e005269e632b41c9cb743304c9b9705 224 Pfam PF04405 Domain of Unknown function (DUF542) 7 61 5.5E-19 T 13-09-2016 IPR019903 Repair of iron centres family PMA3_RS16260 2e005269e632b41c9cb743304c9b9705 224 PANTHER PTHR36438 1 221 1.6E-77 T 13-09-2016 PMA3_RS16260 2e005269e632b41c9cb743304c9b9705 224 PANTHER PTHR36438:SF1 1 221 1.6E-77 T 13-09-2016 PMA3_RS16260 2e005269e632b41c9cb743304c9b9705 224 Pfam PF01814 Hemerythrin HHE cation binding domain 79 216 2.4E-23 T 13-09-2016 IPR012312 Haemerythrin-like PMA3_RS16260 2e005269e632b41c9cb743304c9b9705 224 Gene3D G3DSA:1.20.120.520 81 221 9.0E-25 T 13-09-2016 PMA3_RS16375 92f11eedeafdd1356d341d356bd074d2 175 Pfam PF05573 NosL 19 163 1.1E-46 T 13-09-2016 IPR008719 Nitrous oxide reductase accessory protein NosL PMA3_RS16375 92f11eedeafdd1356d341d356bd074d2 175 SUPERFAMILY SSF160387 64 169 4.97E-30 T 13-09-2016 PMA3_RS16375 92f11eedeafdd1356d341d356bd074d2 175 PANTHER PTHR41247 6 165 8.7E-41 T 13-09-2016 PMA3_RS19685 9583962e03f6c3453028aa71d5d21354 165 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 163 1.9E-49 T 13-09-2016 PMA3_RS19685 9583962e03f6c3453028aa71d5d21354 165 PANTHER PTHR10371 1 164 1.2E-107 T 13-09-2016 PMA3_RS19685 9583962e03f6c3453028aa71d5d21354 165 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 21 164 4.9E-49 T 13-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 PMA3_RS19685 9583962e03f6c3453028aa71d5d21354 165 Gene3D G3DSA:3.40.30.10 85 163 1.2E-7 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS19685 9583962e03f6c3453028aa71d5d21354 165 PANTHER PTHR10371:SF7 1 164 1.2E-107 T 13-09-2016 PMA3_RS19685 9583962e03f6c3453028aa71d5d21354 165 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 122 140 - T 13-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 PMA3_RS19685 9583962e03f6c3453028aa71d5d21354 165 PIRSF PIRSF000216 2 165 3.1E-53 T 13-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 PMA3_RS19685 9583962e03f6c3453028aa71d5d21354 165 SUPERFAMILY SSF52833 14 164 1.45E-47 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS25800 95f7f2e48b54ba669c5dfe6c5ed92636 223 SUPERFAMILY SSF53254 72 183 9.85E-13 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS25800 95f7f2e48b54ba669c5dfe6c5ed92636 223 Gene3D G3DSA:3.40.50.1240 72 184 2.7E-8 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS00655 b7ecd5018f2377dd1588957f5c8af0bf 355 PANTHER PTHR11746:SF63 6 329 2.8E-58 T 13-09-2016 PMA3_RS00655 b7ecd5018f2377dd1588957f5c8af0bf 355 Gene3D G3DSA:3.40.50.150 93 331 7.1E-51 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS00655 b7ecd5018f2377dd1588957f5c8af0bf 355 SUPERFAMILY SSF53335 95 332 1.53E-40 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS00655 b7ecd5018f2377dd1588957f5c8af0bf 355 Gene3D G3DSA:1.10.10.10 8 87 1.0E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00655 b7ecd5018f2377dd1588957f5c8af0bf 355 PANTHER PTHR11746 6 329 2.8E-58 T 13-09-2016 PMA3_RS00655 b7ecd5018f2377dd1588957f5c8af0bf 355 SUPERFAMILY SSF46785 13 89 4.99E-8 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS00655 b7ecd5018f2377dd1588957f5c8af0bf 355 Pfam PF00891 O-methyltransferase 105 326 3.2E-40 T 13-09-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 PMA3_RS00655 b7ecd5018f2377dd1588957f5c8af0bf 355 Pfam PF16864 Dimerisation domain 14 96 2.9E-15 T 13-09-2016 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain PMA3_RS00655 b7ecd5018f2377dd1588957f5c8af0bf 355 PIRSF PIRSF005739 3 336 3.6E-29 T 13-09-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 PMA3_RS22560 028bcaec480aba7fc05f6b7cd1f0f4ff 84 Gene3D G3DSA:1.10.150.250 3 83 3.5E-27 T 13-09-2016 IPR005631 Flavinator of succinate dehydrogenase PMA3_RS22560 028bcaec480aba7fc05f6b7cd1f0f4ff 84 PANTHER PTHR39585 2 83 4.5E-30 T 13-09-2016 PMA3_RS22560 028bcaec480aba7fc05f6b7cd1f0f4ff 84 SUPERFAMILY SSF109910 2 79 2.22E-24 T 13-09-2016 IPR005631 Flavinator of succinate dehydrogenase PMA3_RS22560 028bcaec480aba7fc05f6b7cd1f0f4ff 84 PANTHER PTHR39585:SF1 2 83 4.5E-30 T 13-09-2016 PMA3_RS22560 028bcaec480aba7fc05f6b7cd1f0f4ff 84 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 1.1E-23 T 13-09-2016 IPR005631 Flavinator of succinate dehydrogenase PMA3_RS04590 03cda4e9b60957727173d602f521c8ba 227 SMART SM00260 76 219 3.1E-5 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04590 03cda4e9b60957727173d602f521c8ba 227 SUPERFAMILY SSF50341 75 222 1.83E-22 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04590 03cda4e9b60957727173d602f521c8ba 227 Pfam PF01584 CheW-like domain 81 221 6.1E-24 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04590 03cda4e9b60957727173d602f521c8ba 227 PANTHER PTHR22617 78 226 3.2E-18 T 13-09-2016 PMA3_RS13555 99730f18ee1a043b1021735f62303830 321 PIRSF PIRSF006268 1 316 6.6E-79 T 13-09-2016 IPR024932 Flavin transferase ApbE GO:0017013 PMA3_RS13555 99730f18ee1a043b1021735f62303830 321 Pfam PF02424 ApbE family 15 296 1.1E-75 T 13-09-2016 IPR024932 Flavin transferase ApbE GO:0017013 PMA3_RS13555 99730f18ee1a043b1021735f62303830 321 PANTHER PTHR30040:SF3 6 308 2.8E-101 T 13-09-2016 PMA3_RS13555 99730f18ee1a043b1021735f62303830 321 PANTHER PTHR30040 6 308 2.8E-101 T 13-09-2016 PMA3_RS13555 99730f18ee1a043b1021735f62303830 321 SUPERFAMILY SSF143631 7 302 5.1E-88 T 13-09-2016 IPR003374 ApbE-like domain PMA3_RS19670 4cb3b3a9ef8e5ce5e9ac0e3a118b96e6 137 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 1.7E-32 T 13-09-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 PMA3_RS19670 4cb3b3a9ef8e5ce5e9ac0e3a118b96e6 137 PANTHER PTHR11058 1 127 2.6E-63 T 13-09-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 PMA3_RS19670 4cb3b3a9ef8e5ce5e9ac0e3a118b96e6 137 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.892 T 13-09-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 PMA3_RS19670 4cb3b3a9ef8e5ce5e9ac0e3a118b96e6 137 PANTHER PTHR11058:SF5 1 127 2.6E-63 T 13-09-2016 PMA3_RS17870 cbfe40e8268a5c3aba4bf31a39290500 280 Gene3D G3DSA:1.10.3720.10 11 272 5.4E-49 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17870 cbfe40e8268a5c3aba4bf31a39290500 280 PANTHER PTHR30193:SF32 7 266 1.6E-73 T 13-09-2016 PMA3_RS17870 cbfe40e8268a5c3aba4bf31a39290500 280 SUPERFAMILY SSF161098 16 268 5.14E-54 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17870 cbfe40e8268a5c3aba4bf31a39290500 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 265 8.2E-11 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS17870 cbfe40e8268a5c3aba4bf31a39290500 280 PANTHER PTHR30193 7 266 1.6E-73 T 13-09-2016 PMA3_RS27740 4032cb19cc386f355752ba39be5713f3 52 PANTHER PTHR21659 1 52 4.4E-22 T 13-09-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 PMA3_RS27740 4032cb19cc386f355752ba39be5713f3 52 Pfam PF01679 Proteolipid membrane potential modulator 2 49 1.5E-21 T 13-09-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 PMA3_RS27740 4032cb19cc386f355752ba39be5713f3 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 13-09-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 PMA3_RS25945 4cf210a439fd32d51b9542b3461dc68c 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 1.1E-5 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS25945 4cf210a439fd32d51b9542b3461dc68c 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 1.1E-5 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS25945 4cf210a439fd32d51b9542b3461dc68c 216 SUPERFAMILY SSF48498 88 212 3.86E-42 T 13-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PMA3_RS25945 4cf210a439fd32d51b9542b3461dc68c 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 4.1E-12 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS25945 4cf210a439fd32d51b9542b3461dc68c 216 Gene3D G3DSA:1.10.357.10 71 212 4.8E-58 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS25945 4cf210a439fd32d51b9542b3461dc68c 216 Pfam PF08362 YcdC-like protein, C-terminal region 71 212 2.1E-55 T 13-09-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PMA3_RS25945 4cf210a439fd32d51b9542b3461dc68c 216 SUPERFAMILY SSF46689 13 91 1.23E-16 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS25945 4cf210a439fd32d51b9542b3461dc68c 216 PANTHER PTHR30055 7 216 2.2E-78 T 13-09-2016 PMA3_RS25945 4cf210a439fd32d51b9542b3461dc68c 216 PANTHER PTHR30055:SF42 7 216 2.2E-78 T 13-09-2016 PMA3_RS25945 4cf210a439fd32d51b9542b3461dc68c 216 Gene3D G3DSA:1.10.10.60 14 70 4.7E-18 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS13945 02fe19af30b429f70bcbe49d844f8e2f 422 PANTHER PTHR34596 1 422 1.3E-166 T 13-09-2016 PMA3_RS13945 02fe19af30b429f70bcbe49d844f8e2f 422 Pfam PF03573 outer membrane porin, OprD family 27 420 1.8E-151 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS13945 02fe19af30b429f70bcbe49d844f8e2f 422 Gene3D G3DSA:2.40.160.10 32 422 1.0E-149 T 13-09-2016 IPR023614 Porin domain PMA3_RS05940 6844259524cd78e3add29358958751e2 341 PANTHER PTHR30547:SF0 17 326 3.2E-100 T 13-09-2016 PMA3_RS05940 6844259524cd78e3add29358958751e2 341 Pfam PF06250 Protein of unknown function (DUF1016) 16 327 2.4E-112 T 13-09-2016 IPR009362 Protein of unknown function DUF1016 PMA3_RS05940 6844259524cd78e3add29358958751e2 341 PANTHER PTHR30547 17 326 3.2E-100 T 13-09-2016 PMA3_RS04255 f5bd48f94e13529c4ab1663f26de1090 328 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 32 324 9.9E-38 T 13-09-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin PMA3_RS04255 f5bd48f94e13529c4ab1663f26de1090 328 PIRSF PIRSF001439 11 327 6.7E-53 T 13-09-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin PMA3_RS04255 f5bd48f94e13529c4ab1663f26de1090 328 Gene3D G3DSA:3.40.50.720 153 311 1.7E-29 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS04255 f5bd48f94e13529c4ab1663f26de1090 328 PANTHER PTHR13812:SF19 12 328 4.0E-69 T 13-09-2016 PMA3_RS04255 f5bd48f94e13529c4ab1663f26de1090 328 PANTHER PTHR13812 12 328 4.0E-69 T 13-09-2016 PMA3_RS04255 f5bd48f94e13529c4ab1663f26de1090 328 Gene3D G3DSA:3.30.1780.10 19 152 6.3E-28 T 13-09-2016 IPR023401 Ornithine cyclodeaminase, N-terminal PMA3_RS04255 f5bd48f94e13529c4ab1663f26de1090 328 SUPERFAMILY SSF51735 18 326 8.91E-68 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26260 129fe97fec6f1ec0fdfc8ff1b7103e8d 415 Pfam PF03573 outer membrane porin, OprD family 27 414 2.2E-132 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS26260 129fe97fec6f1ec0fdfc8ff1b7103e8d 415 PANTHER PTHR34596 1 415 2.5E-130 T 13-09-2016 PMA3_RS26260 129fe97fec6f1ec0fdfc8ff1b7103e8d 415 Gene3D G3DSA:2.40.160.10 29 415 1.7E-132 T 13-09-2016 IPR023614 Porin domain PMA3_RS16050 122fc4570557a4d673c2144dab2874fc 330 PANTHER PTHR30011 5 298 1.2E-80 T 13-09-2016 PMA3_RS16050 122fc4570557a4d673c2144dab2874fc 330 SUPERFAMILY SSF51679 21 318 4.12E-59 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS16050 122fc4570557a4d673c2144dab2874fc 330 Pfam PF00296 Luciferase-like monooxygenase 26 224 2.7E-39 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS16050 122fc4570557a4d673c2144dab2874fc 330 PANTHER PTHR30011:SF14 5 298 1.2E-80 T 13-09-2016 PMA3_RS16050 122fc4570557a4d673c2144dab2874fc 330 Gene3D G3DSA:3.20.20.30 10 318 5.9E-66 T 13-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PMA3_RS16050 122fc4570557a4d673c2144dab2874fc 330 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 14 318 5.6E-126 T 13-09-2016 IPR020020 Luciferase-type oxidoreductase PMA3_RS06245 44ac40bc0d58f4fba287e044edb546f7 326 PANTHER PTHR30100:SF1 1 326 5.4E-123 T 13-09-2016 PMA3_RS06245 44ac40bc0d58f4fba287e044edb546f7 326 Gene3D G3DSA:3.40.718.10 1 323 2.5E-124 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS06245 44ac40bc0d58f4fba287e044edb546f7 326 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 326 141.063 T 13-09-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 PMA3_RS06245 44ac40bc0d58f4fba287e044edb546f7 326 PIRSF PIRSF002465 1 325 2.5E-118 T 13-09-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 PMA3_RS06245 44ac40bc0d58f4fba287e044edb546f7 326 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 323 8.9E-99 T 13-09-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 PMA3_RS06245 44ac40bc0d58f4fba287e044edb546f7 326 Pfam PF02504 Fatty acid synthesis protein 1 313 1.9E-95 T 13-09-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 PMA3_RS06245 44ac40bc0d58f4fba287e044edb546f7 326 PANTHER PTHR30100 1 326 5.4E-123 T 13-09-2016 PMA3_RS06245 44ac40bc0d58f4fba287e044edb546f7 326 SUPERFAMILY SSF53659 1 324 4.52E-101 T 13-09-2016 PMA3_RS26430 bafb0cd18004ffc3eaacd0f860ace34d 507 PANTHER PTHR33840 4 286 1.1E-72 T 13-09-2016 PMA3_RS26430 bafb0cd18004ffc3eaacd0f860ace34d 507 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 3 269 2.3E-76 T 13-09-2016 IPR018712 Domain of unknown function DUF2235 PMA3_RS26430 bafb0cd18004ffc3eaacd0f860ace34d 507 PANTHER PTHR33840:SF1 4 286 1.1E-72 T 13-09-2016 PMA3_RS21525 3ef99223ea3edeb12e2f5796447e1679 523 Pfam PF02120 Flagellar hook-length control protein FliK 430 509 7.1E-19 T 13-09-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal PMA3_RS17650 15a8014dbb770e389382938cb85f520f 210 Pfam PF02630 SCO1/SenC 58 135 5.7E-14 T 13-09-2016 IPR003782 Copper chaperone SCO1/SenC PMA3_RS17650 15a8014dbb770e389382938cb85f520f 210 PANTHER PTHR12151 55 201 1.0E-18 T 13-09-2016 IPR003782 Copper chaperone SCO1/SenC PMA3_RS17650 15a8014dbb770e389382938cb85f520f 210 Gene3D G3DSA:3.40.30.10 47 203 3.8E-29 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS17650 15a8014dbb770e389382938cb85f520f 210 Gene3D G3DSA:3.40.30.10 7 14 3.8E-29 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS17650 15a8014dbb770e389382938cb85f520f 210 SUPERFAMILY SSF52833 51 203 4.59E-28 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS17650 15a8014dbb770e389382938cb85f520f 210 PANTHER PTHR12151:SF0 55 201 1.0E-18 T 13-09-2016 PMA3_RS00165 36a65b20b5cc9f8cd02d6cd16f4159e1 358 Pfam PF10023 Putative aminopeptidase 34 352 1.5E-132 T 13-09-2016 IPR014553 Predicted aminopeptidase PMA3_RS00165 36a65b20b5cc9f8cd02d6cd16f4159e1 358 PIRSF PIRSF029285 10 358 1.8E-155 T 13-09-2016 IPR014553 Predicted aminopeptidase PMA3_RS17955 c28aeccfadfe0b28465390c5dd975825 313 PANTHER PTHR23088:SF5 3 302 3.5E-84 T 13-09-2016 PMA3_RS17955 c28aeccfadfe0b28465390c5dd975825 313 Pfam PF00795 Carbon-nitrogen hydrolase 3 282 6.8E-50 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS17955 c28aeccfadfe0b28465390c5dd975825 313 PANTHER PTHR23088 3 302 3.5E-84 T 13-09-2016 PMA3_RS17955 c28aeccfadfe0b28465390c5dd975825 313 Gene3D G3DSA:3.60.110.10 2 300 7.7E-71 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS17955 c28aeccfadfe0b28465390c5dd975825 313 SUPERFAMILY SSF56317 3 301 3.53E-76 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS01990 1cde4e9724498735dd68fe591b26cc17 286 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 285 47.34 T 13-09-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PMA3_RS01990 1cde4e9724498735dd68fe591b26cc17 286 PANTHER PTHR10067 7 283 7.5E-102 T 13-09-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PMA3_RS01990 1cde4e9724498735dd68fe591b26cc17 286 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 53 282 6.8E-78 T 13-09-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PMA3_RS01990 1cde4e9724498735dd68fe591b26cc17 286 Pfam PF02666 Phosphatidylserine decarboxylase 63 282 1.0E-60 T 13-09-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PMA3_RS09155 ace8a981f67111d97c993be37b542631 615 PANTHER PTHR34384:SF6 157 615 6.2E-72 T 13-09-2016 PMA3_RS09155 ace8a981f67111d97c993be37b542631 615 Pfam PF04183 IucA / IucC family 154 397 4.9E-56 T 13-09-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 PMA3_RS09155 ace8a981f67111d97c993be37b542631 615 PANTHER PTHR34384 157 615 6.2E-72 T 13-09-2016 PMA3_RS09155 ace8a981f67111d97c993be37b542631 615 Pfam PF06276 Ferric iron reductase FhuF-like transporter 447 586 1.1E-15 T 13-09-2016 IPR022770 Ferric iron reductase FhuF domain PMA3_RS05890 959506bb3d1b15e5c83f8144dbdd33d6 141 Pfam PF09842 Predicted membrane protein (DUF2069) 24 125 1.7E-28 T 13-09-2016 IPR018643 Protein of unknown function DUF2069, membrane PMA3_RS13340 c1dffc60d7e7c7400d3c669677bd9c83 299 Gene3D G3DSA:2.60.120.330 121 223 1.2E-19 T 13-09-2016 IPR027443 Isopenicillin N synthase-like PMA3_RS13340 c1dffc60d7e7c7400d3c669677bd9c83 299 PANTHER PTHR12366 3 243 4.9E-149 T 13-09-2016 PMA3_RS13340 c1dffc60d7e7c7400d3c669677bd9c83 299 SUPERFAMILY SSF51197 99 227 2.44E-19 T 13-09-2016 PMA3_RS13340 c1dffc60d7e7c7400d3c669677bd9c83 299 PANTHER PTHR12366:SF25 3 243 4.9E-149 T 13-09-2016 PMA3_RS13340 c1dffc60d7e7c7400d3c669677bd9c83 299 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 69 222 1.5E-49 T 13-09-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 PMA3_RS03500 85ab2735d32bbb949cf4efd8ce6b303c 237 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 232 3.0E-65 T 13-09-2016 IPR005224 Sugar fermentation stimulation protein PMA3_RS03500 85ab2735d32bbb949cf4efd8ce6b303c 237 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 235 53.997 T 13-09-2016 IPR005224 Sugar fermentation stimulation protein PMA3_RS03500 85ab2735d32bbb949cf4efd8ce6b303c 237 PANTHER PTHR30545 1 236 3.1E-82 T 13-09-2016 PMA3_RS03500 85ab2735d32bbb949cf4efd8ce6b303c 237 Pfam PF03749 Sugar fermentation stimulation protein 13 225 4.5E-69 T 13-09-2016 IPR005224 Sugar fermentation stimulation protein PMA3_RS03500 85ab2735d32bbb949cf4efd8ce6b303c 237 PANTHER PTHR30545:SF2 1 236 3.1E-82 T 13-09-2016 PMA3_RS17560 d167156ced0cdf68e84b02fa9828c96d 482 Pfam PF07012 Curlin associated repeat 406 438 1.3E-4 T 13-09-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 PMA3_RS17560 d167156ced0cdf68e84b02fa9828c96d 482 Pfam PF07012 Curlin associated repeat 138 172 1.7E-5 T 13-09-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 PMA3_RS06230 92107c4aa836690142aaddae5dac4c8b 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 184 3.9E-47 T 13-09-2016 IPR003697 Maf-like protein GO:0005737 PMA3_RS06230 92107c4aa836690142aaddae5dac4c8b 192 PANTHER PTHR11746:SF102 118 191 8.6E-33 T 13-09-2016 PMA3_RS06230 92107c4aa836690142aaddae5dac4c8b 192 SUPERFAMILY SSF52972 2 184 4.05E-54 T 13-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PMA3_RS06230 92107c4aa836690142aaddae5dac4c8b 192 Pfam PF02545 Maf-like protein 4 184 4.7E-40 T 13-09-2016 IPR003697 Maf-like protein GO:0005737 PMA3_RS06230 92107c4aa836690142aaddae5dac4c8b 192 Gene3D G3DSA:3.90.950.10 2 186 3.2E-52 T 13-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PMA3_RS06230 92107c4aa836690142aaddae5dac4c8b 192 PIRSF PIRSF006305 1 190 4.0E-37 T 13-09-2016 IPR003697 Maf-like protein GO:0005737 PMA3_RS06230 92107c4aa836690142aaddae5dac4c8b 192 PANTHER PTHR11746 118 191 8.6E-33 T 13-09-2016 PMA3_RS06230 92107c4aa836690142aaddae5dac4c8b 192 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 27.33 T 13-09-2016 IPR003697 Maf-like protein GO:0005737 PMA3_RS24355 d2811039f3849a198080b9847c9d7264 122 PANTHER PTHR35796 16 122 1.5E-25 T 13-09-2016 PMA3_RS24355 d2811039f3849a198080b9847c9d7264 122 Gene3D G3DSA:2.30.29.50 11 98 6.1E-33 T 13-09-2016 IPR012544 Bacterial Pleckstrin homology domain PMA3_RS24355 d2811039f3849a198080b9847c9d7264 122 Pfam PF08000 Bacterial PH domain 11 121 2.8E-36 T 13-09-2016 IPR012544 Bacterial Pleckstrin homology domain PMA3_RS24355 d2811039f3849a198080b9847c9d7264 122 SUPERFAMILY SSF50729 14 122 3.52E-37 T 13-09-2016 IPR011993 PH domain-like PMA3_RS14740 6b0e63b394a49a368d5f3d2fda95f91b 551 PANTHER PTHR30462:SF0 2 287 9.6E-91 T 13-09-2016 PMA3_RS14740 6b0e63b394a49a368d5f3d2fda95f91b 551 PANTHER PTHR30462 2 287 9.6E-91 T 13-09-2016 PMA3_RS14740 6b0e63b394a49a368d5f3d2fda95f91b 551 Pfam PF02470 MlaD protein 50 115 3.0E-9 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS14740 6b0e63b394a49a368d5f3d2fda95f91b 551 Pfam PF02470 MlaD protein 293 404 1.5E-17 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS14740 6b0e63b394a49a368d5f3d2fda95f91b 551 Pfam PF02470 MlaD protein 165 225 4.1E-7 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS14740 6b0e63b394a49a368d5f3d2fda95f91b 551 SUPERFAMILY SSF55060 83 267 2.16E-9 T 13-09-2016 IPR013750 GHMP kinase, C-terminal domain PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 SUPERFAMILY SSF161070 10 363 1.44E-116 T 13-09-2016 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 SUPERFAMILY SSF161070 391 466 1.44E-116 T 13-09-2016 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 13-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 PANTHER PTHR11616 392 466 1.2E-124 T 13-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 PANTHER PTHR11616:SF167 392 466 1.2E-124 T 13-09-2016 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 PANTHER PTHR11616:SF167 12 366 1.2E-124 T 13-09-2016 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 8.1E-13 T 13-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 8.1E-13 T 13-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 259 279 8.1E-13 T 13-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 PANTHER PTHR11616 12 366 1.2E-124 T 13-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 Pfam PF00209 Sodium:neurotransmitter symporter family 157 365 1.6E-15 T 13-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PMA3_RS25615 ae9a2268c289b05529e40075715629d1 467 Pfam PF00209 Sodium:neurotransmitter symporter family 11 124 4.6E-18 T 13-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PMA3_RS20725 ed9d2540a90c7614a54f0dabb24b67ed 316 PANTHER PTHR34595 1 316 3.7E-123 T 13-09-2016 PMA3_RS20725 ed9d2540a90c7614a54f0dabb24b67ed 316 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 313 2.5E-96 T 13-09-2016 IPR007296 Domain of unknown function DUF403 PMA3_RS24955 883d96b85a7c536a803c49cf50a9da31 160 Gene3D G3DSA:3.40.30.10 4 159 4.6E-60 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS24955 883d96b85a7c536a803c49cf50a9da31 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 13-09-2016 IPR029759 Glutathione peroxidase active site PMA3_RS24955 883d96b85a7c536a803c49cf50a9da31 160 PIRSF PIRSF000303 1 160 1.2E-57 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS24955 883d96b85a7c536a803c49cf50a9da31 160 PANTHER PTHR11592 4 159 3.6E-77 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS24955 883d96b85a7c536a803c49cf50a9da31 160 Pfam PF00255 Glutathione peroxidase 4 110 2.6E-38 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS24955 883d96b85a7c536a803c49cf50a9da31 160 PANTHER PTHR11592:SF40 4 159 3.6E-77 T 13-09-2016 PMA3_RS24955 883d96b85a7c536a803c49cf50a9da31 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 6.3E-18 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS24955 883d96b85a7c536a803c49cf50a9da31 160 PRINTS PR01011 Glutathione peroxidase family signature 121 130 6.3E-18 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS24955 883d96b85a7c536a803c49cf50a9da31 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 6.3E-18 T 13-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PMA3_RS24955 883d96b85a7c536a803c49cf50a9da31 160 SUPERFAMILY SSF52833 4 159 1.92E-54 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS20065 6e1dc48b735cf4d8c21d8150e5f3470f 480 SMART SM00100 333 456 7.2E-7 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS20065 6e1dc48b735cf4d8c21d8150e5f3470f 480 PANTHER PTHR30566 73 285 3.6E-29 T 13-09-2016 PMA3_RS20065 6e1dc48b735cf4d8c21d8150e5f3470f 480 Pfam PF00027 Cyclic nucleotide-binding domain 352 432 9.1E-12 T 13-09-2016 IPR000595 Cyclic nucleotide-binding domain PMA3_RS20065 6e1dc48b735cf4d8c21d8150e5f3470f 480 Pfam PF00924 Mechanosensitive ion channel 111 308 5.1E-34 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS20065 6e1dc48b735cf4d8c21d8150e5f3470f 480 Gene3D G3DSA:2.30.30.60 168 217 4.4E-16 T 13-09-2016 PMA3_RS20065 6e1dc48b735cf4d8c21d8150e5f3470f 480 PANTHER PTHR30566:SF5 73 285 3.6E-29 T 13-09-2016 PMA3_RS20065 6e1dc48b735cf4d8c21d8150e5f3470f 480 SUPERFAMILY SSF51206 325 453 7.99E-22 T 13-09-2016 IPR018490 Cyclic nucleotide-binding-like PMA3_RS20065 6e1dc48b735cf4d8c21d8150e5f3470f 480 Gene3D G3DSA:2.60.120.10 327 456 6.4E-20 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS20065 6e1dc48b735cf4d8c21d8150e5f3470f 480 SUPERFAMILY SSF50182 153 218 3.07E-15 T 13-09-2016 IPR010920 LSM domain PMA3_RS20065 6e1dc48b735cf4d8c21d8150e5f3470f 480 PIRSF PIRSF026673 1 479 1.8E-194 T 13-09-2016 IPR016846 Predicted ion channel, cNMP-binding PMA3_RS29070 5c0070a677b0575a968bb45596b2a731 135 PANTHER PTHR35091 3 135 6.6E-36 T 13-09-2016 PMA3_RS29070 5c0070a677b0575a968bb45596b2a731 135 Pfam PF03748 Flagellar basal body-associated protein FliL 32 135 3.4E-18 T 13-09-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PMA3_RS29070 5c0070a677b0575a968bb45596b2a731 135 PANTHER PTHR35091:SF1 3 135 6.6E-36 T 13-09-2016 PMA3_RS03195 d47f8ed007e6701a83b68258bdc71b83 154 PANTHER PTHR37952:SF2 8 150 1.6E-77 T 13-09-2016 PMA3_RS03195 d47f8ed007e6701a83b68258bdc71b83 154 PANTHER PTHR37952 8 150 1.6E-77 T 13-09-2016 PMA3_RS03195 d47f8ed007e6701a83b68258bdc71b83 154 PIRSF PIRSF003174 2 154 2.3E-69 T 13-09-2016 IPR010292 Uncharacterised protein family CreA PMA3_RS03195 d47f8ed007e6701a83b68258bdc71b83 154 Pfam PF05981 CreA protein 23 150 2.8E-58 T 13-09-2016 IPR010292 Uncharacterised protein family CreA PMA3_RS29220 086f54f1f26b6b7fa9463e6643aa1ed4 412 Gene3D G3DSA:1.25.40.10 257 391 1.9E-20 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS29220 086f54f1f26b6b7fa9463e6643aa1ed4 412 Gene3D G3DSA:1.25.40.10 89 209 1.9E-20 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS29220 086f54f1f26b6b7fa9463e6643aa1ed4 412 SUPERFAMILY SSF48452 269 305 2.68E-13 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS29220 086f54f1f26b6b7fa9463e6643aa1ed4 412 SUPERFAMILY SSF48452 350 394 2.68E-13 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS29220 086f54f1f26b6b7fa9463e6643aa1ed4 412 SUPERFAMILY SSF48452 88 187 2.68E-13 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS29220 086f54f1f26b6b7fa9463e6643aa1ed4 412 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 392 6.2E-116 T 13-09-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 PMA3_RS29220 086f54f1f26b6b7fa9463e6643aa1ed4 412 Pfam PF07219 HemY protein N-terminus 27 133 6.0E-26 T 13-09-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 PMA3_RS05895 c5aa3724d1809a856b06ae52a39b47fb 198 Gene3D G3DSA:3.40.50.360 3 197 4.0E-67 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS05895 c5aa3724d1809a856b06ae52a39b47fb 198 Pfam PF03358 NADPH-dependent FMN reductase 13 127 8.1E-9 T 13-09-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PMA3_RS05895 c5aa3724d1809a856b06ae52a39b47fb 198 PANTHER PTHR30546 3 196 2.3E-70 T 13-09-2016 PMA3_RS05895 c5aa3724d1809a856b06ae52a39b47fb 198 SUPERFAMILY SSF52218 4 196 1.15E-60 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS05895 c5aa3724d1809a856b06ae52a39b47fb 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 3 198 31.291 T 13-09-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 PMA3_RS05895 c5aa3724d1809a856b06ae52a39b47fb 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 6 196 1.8E-43 T 13-09-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 PMA3_RS05895 c5aa3724d1809a856b06ae52a39b47fb 198 ProSitePatterns PS00201 Flavodoxin signature. 8 24 - T 13-09-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PMA3_RS21145 dd2bc348c15b11b03232b35d93e3488b 178 SUPERFAMILY SSF54001 42 170 3.01E-41 T 13-09-2016 PMA3_RS21145 dd2bc348c15b11b03232b35d93e3488b 178 Pfam PF00877 NlpC/P60 family 58 166 5.1E-30 T 13-09-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS21145 dd2bc348c15b11b03232b35d93e3488b 178 PANTHER PTHR21666 33 169 4.8E-37 T 13-09-2016 PMA3_RS21145 dd2bc348c15b11b03232b35d93e3488b 178 Gene3D G3DSA:3.90.1720.10 43 171 4.3E-44 T 13-09-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS00345 18fc9a3b569ae2eb9a9554d04c549fce 378 Gene3D G3DSA:1.50.10.10 17 366 1.2E-88 T 13-09-2016 IPR012341 Six-hairpin glycosidase GO:0003824 PMA3_RS00345 18fc9a3b569ae2eb9a9554d04c549fce 378 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 124 142 - T 13-09-2016 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PMA3_RS00345 18fc9a3b569ae2eb9a9554d04c549fce 378 SUPERFAMILY SSF48208 15 363 1.21E-93 T 13-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PMA3_RS00345 18fc9a3b569ae2eb9a9554d04c549fce 378 Pfam PF01270 Glycosyl hydrolases family 8 18 357 8.4E-82 T 13-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PMA3_RS00345 18fc9a3b569ae2eb9a9554d04c549fce 378 PRINTS PR00735 Glycosyl hydrolase family 8 signature 225 236 1.2E-16 T 13-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PMA3_RS00345 18fc9a3b569ae2eb9a9554d04c549fce 378 PRINTS PR00735 Glycosyl hydrolase family 8 signature 62 75 1.2E-16 T 13-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PMA3_RS00345 18fc9a3b569ae2eb9a9554d04c549fce 378 PRINTS PR00735 Glycosyl hydrolase family 8 signature 343 357 1.2E-16 T 13-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PMA3_RS00345 18fc9a3b569ae2eb9a9554d04c549fce 378 PRINTS PR00735 Glycosyl hydrolase family 8 signature 249 258 1.2E-16 T 13-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PMA3_RS00345 18fc9a3b569ae2eb9a9554d04c549fce 378 PRINTS PR00735 Glycosyl hydrolase family 8 signature 189 206 1.2E-16 T 13-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PMA3_RS00345 18fc9a3b569ae2eb9a9554d04c549fce 378 PRINTS PR00735 Glycosyl hydrolase family 8 signature 124 142 1.2E-16 T 13-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PMA3_RS13090 2db7e881294a025c9c459fdbb082e39e 148 Pfam PF04214 Protein of unknown function, DUF 52 119 1.2E-25 T 13-09-2016 IPR007332 Protein of unknown function DUF411 PMA3_RS04580 4653d5fa23f61377108eec6f91062fe0 178 PANTHER PTHR22617:SF33 19 171 8.7E-39 T 13-09-2016 PMA3_RS04580 4653d5fa23f61377108eec6f91062fe0 178 PANTHER PTHR22617 19 171 8.7E-39 T 13-09-2016 PMA3_RS04580 4653d5fa23f61377108eec6f91062fe0 178 SMART SM00260 14 155 9.5E-16 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04580 4653d5fa23f61377108eec6f91062fe0 178 SUPERFAMILY SSF50341 19 160 2.88E-27 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04580 4653d5fa23f61377108eec6f91062fe0 178 Pfam PF01584 CheW-like domain 19 157 1.2E-28 T 13-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PMA3_RS04730 57232c91e4417de1a25749e1bd010b3b 132 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 24 121 3.6E-35 T 13-09-2016 PMA3_RS04730 57232c91e4417de1a25749e1bd010b3b 132 PANTHER PTHR38013 1 132 8.2E-34 T 13-09-2016 PMA3_RS06935 26eb57ac45665a604e7bf4bf9f5be412 1556 Pfam PF14424 The BURPS668_1122 family of deaminases 1396 1545 6.5E-8 T 13-09-2016 IPR032721 Deaminases, BURPS668_1122 family PMA3_RS08005 18d3f8d62310b61f644b684387266d43 556 Pfam PF11394 Protein of unknown function (DUF2875) 100 549 4.5E-214 T 13-09-2016 IPR021531 Protein of unknown function DUF2875 PMA3_RS28235 8f3f17842da12e4ad80c562b281ff578 131 Pfam PF06476 Protein of unknown function (DUF1090) 16 124 6.6E-35 T 13-09-2016 IPR009468 Protein of unknown function DUF1090 PMA3_RS16830 be0b608a449fc8258b9a923555453e24 104 Pfam PF04341 Protein of unknown function, DUF485 12 99 1.0E-30 T 13-09-2016 IPR007436 Protein of unknown function DUF485 PMA3_RS16830 be0b608a449fc8258b9a923555453e24 104 PANTHER PTHR38598 3 99 4.8E-28 T 13-09-2016 PMA3_RS22830 97119cab2c02301126b598c46d088d35 94 Pfam PF04606 Ogr/Delta-like zinc finger 8 52 3.7E-14 T 13-09-2016 IPR007684 Zinc finger, Ogr/Delta-type PMA3_RS07075 8cd4e75d5c560213ceade21b3db2ba81 403 Pfam PF00155 Aminotransferase class I and II 35 387 6.7E-47 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS07075 8cd4e75d5c560213ceade21b3db2ba81 403 PANTHER PTHR11751 8 403 7.1E-194 T 13-09-2016 PMA3_RS07075 8cd4e75d5c560213ceade21b3db2ba81 403 Gene3D G3DSA:3.40.640.10 50 278 9.4E-66 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS07075 8cd4e75d5c560213ceade21b3db2ba81 403 PANTHER PTHR11751:SF303 8 403 7.1E-194 T 13-09-2016 PMA3_RS07075 8cd4e75d5c560213ceade21b3db2ba81 403 SUPERFAMILY SSF53383 6 401 4.57E-94 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS07075 8cd4e75d5c560213ceade21b3db2ba81 403 Gene3D G3DSA:3.90.1150.10 279 402 1.4E-39 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS14075 d281dd0dc5658ba06aab14731bdf8ac4 597 SUPERFAMILY SSF52091 467 579 8.83E-16 T 13-09-2016 IPR002645 STAS domain PMA3_RS14075 d281dd0dc5658ba06aab14731bdf8ac4 597 PANTHER PTHR11814 28 589 1.4E-159 T 13-09-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PMA3_RS14075 d281dd0dc5658ba06aab14731bdf8ac4 597 Gene3D G3DSA:3.30.750.24 468 579 1.5E-16 T 13-09-2016 IPR002645 STAS domain PMA3_RS14075 d281dd0dc5658ba06aab14731bdf8ac4 597 Pfam PF01740 STAS domain 466 576 8.1E-19 T 13-09-2016 IPR002645 STAS domain PMA3_RS14075 d281dd0dc5658ba06aab14731bdf8ac4 597 TIGRFAM TIGR00815 sulP: sulfate permease 33 576 2.1E-117 T 13-09-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PMA3_RS14075 d281dd0dc5658ba06aab14731bdf8ac4 597 Pfam PF00916 Sulfate permease family 46 413 4.0E-85 T 13-09-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PMA3_RS24595 88db904742ee2313e061d501bf151a11 374 Pfam PF01522 Polysaccharide deacetylase 179 303 1.6E-6 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS24595 88db904742ee2313e061d501bf151a11 374 Gene3D G3DSA:3.20.20.370 170 341 1.6E-13 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS24595 88db904742ee2313e061d501bf151a11 374 SUPERFAMILY SSF88713 168 371 1.4E-19 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS12510 421a658f6c0da1e70abfaf66cf069114 188 PANTHER PTHR11608 40 155 2.1E-12 T 13-09-2016 PMA3_RS12510 421a658f6c0da1e70abfaf66cf069114 188 Gene3D G3DSA:3.40.50.2020 12 159 1.6E-25 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS12510 421a658f6c0da1e70abfaf66cf069114 188 SUPERFAMILY SSF53271 13 160 3.28E-21 T 13-09-2016 IPR029057 Phosphoribosyltransferase-like PMA3_RS12510 421a658f6c0da1e70abfaf66cf069114 188 Pfam PF00156 Phosphoribosyl transferase domain 23 156 2.9E-14 T 13-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PMA3_RS09360 f4de287965cfbb0b024e5e093ee3a3ad 177 Gene3D G3DSA:3.30.110.10 85 177 5.7E-40 T 13-09-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PMA3_RS09360 f4de287965cfbb0b024e5e093ee3a3ad 177 SUPERFAMILY SSF55200 89 177 7.72E-33 T 13-09-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PMA3_RS09360 f4de287965cfbb0b024e5e093ee3a3ad 177 SUPERFAMILY SSF54364 12 84 1.03E-25 T 13-09-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PMA3_RS09360 f4de287965cfbb0b024e5e093ee3a3ad 177 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 13 176 4.2E-65 T 13-09-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PMA3_RS09360 f4de287965cfbb0b024e5e093ee3a3ad 177 Gene3D G3DSA:3.10.20.80 11 84 8.6E-31 T 13-09-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PMA3_RS09360 f4de287965cfbb0b024e5e093ee3a3ad 177 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 13 78 6.5E-28 T 13-09-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PMA3_RS09360 f4de287965cfbb0b024e5e093ee3a3ad 177 PANTHER PTHR10938 2 177 8.2E-64 T 13-09-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PMA3_RS09360 f4de287965cfbb0b024e5e093ee3a3ad 177 ProSitePatterns PS00938 Initiation factor 3 signature. 64 77 - T 13-09-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 PMA3_RS09360 f4de287965cfbb0b024e5e093ee3a3ad 177 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 89 174 1.1E-36 T 13-09-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PMA3_RS09360 f4de287965cfbb0b024e5e093ee3a3ad 177 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 176 29.629 T 13-09-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PMA3_RS06410 b7f04484f31e0ee65a825fefa5fbecfa 418 Gene3D G3DSA:1.20.1600.10 24 415 2.6E-38 T 13-09-2016 PMA3_RS06410 b7f04484f31e0ee65a825fefa5fbecfa 418 PANTHER PTHR30203:SF1 30 414 5.8E-28 T 13-09-2016 PMA3_RS06410 b7f04484f31e0ee65a825fefa5fbecfa 418 SUPERFAMILY SSF56954 12 415 6.8E-56 T 13-09-2016 PMA3_RS06410 b7f04484f31e0ee65a825fefa5fbecfa 418 PANTHER PTHR30203 30 414 5.8E-28 T 13-09-2016 PMA3_RS06410 b7f04484f31e0ee65a825fefa5fbecfa 418 Pfam PF02321 Outer membrane efflux protein 32 217 5.7E-16 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS06410 b7f04484f31e0ee65a825fefa5fbecfa 418 Pfam PF02321 Outer membrane efflux protein 242 413 2.1E-16 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS28195 67ccdd4126357909168bbaab87e613a0 110 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 34 101 4.5E-10 T 13-09-2016 IPR018660 C-type lysozyme, inhibitor PMA3_RS28195 67ccdd4126357909168bbaab87e613a0 110 SUPERFAMILY SSF141488 29 108 5.1E-13 T 13-09-2016 IPR018660 C-type lysozyme, inhibitor PMA3_RS00895 76e2954f3b7e542cdafd96b551236b71 188 PANTHER PTHR11839 2 186 2.1E-84 T 13-09-2016 PMA3_RS00895 76e2954f3b7e542cdafd96b551236b71 188 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 13-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PMA3_RS00895 76e2954f3b7e542cdafd96b551236b71 188 Gene3D G3DSA:3.90.79.10 4 178 3.4E-37 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS00895 76e2954f3b7e542cdafd96b551236b71 188 SUPERFAMILY SSF55811 5 179 3.11E-35 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS00895 76e2954f3b7e542cdafd96b551236b71 188 Pfam PF00293 NUDIX domain 48 144 1.4E-13 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS00895 76e2954f3b7e542cdafd96b551236b71 188 PANTHER PTHR11839:SF12 2 186 2.1E-84 T 13-09-2016 PMA3_RS26015 a8e08fd7ddeb8a1e7d372ed260f4b942 171 Pfam PF16105 Domain of unknown function (DUF4823) 30 170 1.0E-37 T 13-09-2016 IPR032248 Protein of unknown function DUF4823 PMA3_RS01250 a6ed2a24930bdbc4b702efe3e13c853a 454 PANTHER PTHR11271:SF4 15 454 4.3E-206 T 13-09-2016 IPR010252 Formiminoglutamate deiminase PMA3_RS01250 a6ed2a24930bdbc4b702efe3e13c853a 454 Gene3D G3DSA:2.30.40.10 383 443 5.3E-4 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS01250 a6ed2a24930bdbc4b702efe3e13c853a 454 SUPERFAMILY SSF51556 50 375 3.79E-73 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS01250 a6ed2a24930bdbc4b702efe3e13c853a 454 PANTHER PTHR11271 15 454 4.3E-206 T 13-09-2016 PMA3_RS01250 a6ed2a24930bdbc4b702efe3e13c853a 454 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 453 4.5E-225 T 13-09-2016 IPR010252 Formiminoglutamate deiminase PMA3_RS01250 a6ed2a24930bdbc4b702efe3e13c853a 454 Pfam PF01979 Amidohydrolase family 48 429 1.8E-36 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS01250 a6ed2a24930bdbc4b702efe3e13c853a 454 Gene3D G3DSA:3.20.20.140 54 382 1.5E-75 T 13-09-2016 PMA3_RS01250 a6ed2a24930bdbc4b702efe3e13c853a 454 SUPERFAMILY SSF51338 356 449 8.64E-13 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS07560 ae16fd3561cb5eb34781be2c7c799264 202 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 177 4.4E-86 T 13-09-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PMA3_RS07560 ae16fd3561cb5eb34781be2c7c799264 202 SUPERFAMILY SSF46626 13 192 1.94E-30 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07560 ae16fd3561cb5eb34781be2c7c799264 202 PANTHER PTHR10422 22 159 3.0E-87 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS07560 ae16fd3561cb5eb34781be2c7c799264 202 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 177 3.8E-83 T 13-09-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PMA3_RS07560 ae16fd3561cb5eb34781be2c7c799264 202 Gene3D G3DSA:1.10.760.10 14 195 8.6E-38 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS07560 ae16fd3561cb5eb34781be2c7c799264 202 PANTHER PTHR10422:SF23 22 159 3.0E-87 T 13-09-2016 PMA3_RS10770 93350390adede8bd1f373ade3781dcf3 198 PANTHER PTHR37302 2 164 1.5E-18 T 13-09-2016 PMA3_RS10770 93350390adede8bd1f373ade3781dcf3 198 Gene3D G3DSA:1.20.120.450 3 161 8.4E-28 T 13-09-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase PMA3_RS10770 93350390adede8bd1f373ade3781dcf3 198 Pfam PF05163 DinB family 4 164 7.6E-25 T 13-09-2016 IPR007837 DNA damage-inducible protein DinB PMA3_RS10770 93350390adede8bd1f373ade3781dcf3 198 PANTHER PTHR37302:SF2 2 164 1.5E-18 T 13-09-2016 PMA3_RS10770 93350390adede8bd1f373ade3781dcf3 198 SUPERFAMILY SSF109854 6 145 1.81E-29 T 13-09-2016 PMA3_RS20370 43a2c72b26f96ccc0f1b031b4bb8450a 114 Pfam PF04320 Protein with unknown function (DUF469) 7 105 9.9E-37 T 13-09-2016 IPR007416 Protein of unknown function DUF469 PMA3_RS20370 43a2c72b26f96ccc0f1b031b4bb8450a 114 PANTHER PTHR38778:SF1 2 112 1.7E-44 T 13-09-2016 PMA3_RS20370 43a2c72b26f96ccc0f1b031b4bb8450a 114 PANTHER PTHR38778 2 112 1.7E-44 T 13-09-2016 PMA3_RS06235 432a0a25ce89b8d9ad0b45654db4eee6 175 PANTHER PTHR38099 2 172 1.2E-50 T 13-09-2016 PMA3_RS06235 432a0a25ce89b8d9ad0b45654db4eee6 175 Pfam PF02620 Uncharacterized ACR, COG1399 65 170 8.4E-19 T 13-09-2016 IPR003772 Protein of unknown function DUF177 PMA3_RS01125 d1e6434eb21f303c93f5efd01eaa1112 430 Pfam PF01551 Peptidase family M23 328 422 2.4E-24 T 13-09-2016 IPR016047 Peptidase M23 PMA3_RS01125 d1e6434eb21f303c93f5efd01eaa1112 430 PANTHER PTHR21666:SF108 61 425 1.2E-41 T 13-09-2016 PMA3_RS01125 d1e6434eb21f303c93f5efd01eaa1112 430 PANTHER PTHR21666 61 425 1.2E-41 T 13-09-2016 PMA3_RS01125 d1e6434eb21f303c93f5efd01eaa1112 430 SUPERFAMILY SSF51261 244 426 2.62E-44 T 13-09-2016 IPR011055 Duplicated hybrid motif PMA3_RS01125 d1e6434eb21f303c93f5efd01eaa1112 430 Gene3D G3DSA:2.70.70.10 297 427 3.6E-35 T 13-09-2016 PMA3_RS13215 917a0afc107c828d6fd7f58b8701380f 429 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 180 213 0.0024 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS13215 917a0afc107c828d6fd7f58b8701380f 429 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 347 377 1.4E-4 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS13215 917a0afc107c828d6fd7f58b8701380f 429 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 50 79 0.0076 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS13215 917a0afc107c828d6fd7f58b8701380f 429 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 240 268 0.0039 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS13215 917a0afc107c828d6fd7f58b8701380f 429 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 171 221 1.2E-9 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS13215 917a0afc107c828d6fd7f58b8701380f 429 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 232 277 2.9E-6 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS13215 917a0afc107c828d6fd7f58b8701380f 429 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 344 387 6.3E-8 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS13215 917a0afc107c828d6fd7f58b8701380f 429 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 396 427 9.6E-4 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS13215 917a0afc107c828d6fd7f58b8701380f 429 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 101 149 3.1E-5 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS13215 917a0afc107c828d6fd7f58b8701380f 429 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 41 88 2.2E-5 T 13-09-2016 IPR013431 Delta-60 repeat PMA3_RS09975 74e78be0fdf16d2ee1bf66d0aec3cf49 276 Pfam PF05275 Copper resistance protein B precursor (CopB) 72 276 5.4E-91 T 13-09-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 PMA3_RS09975 74e78be0fdf16d2ee1bf66d0aec3cf49 276 SUPERFAMILY SSF56935 83 249 9.34E-5 T 13-09-2016 PMA3_RS16160 a03f18c00b371013284c3c9d4b0a1cd8 671 Pfam PF03477 ATP cone domain 15 97 3.2E-14 T 13-09-2016 IPR005144 ATP-cone domain PMA3_RS16160 a03f18c00b371013284c3c9d4b0a1cd8 671 Gene3D G3DSA:3.20.70.20 132 658 8.7E-194 T 13-09-2016 PMA3_RS16160 a03f18c00b371013284c3c9d4b0a1cd8 671 SUPERFAMILY SSF51998 127 658 3.36E-156 T 13-09-2016 PMA3_RS16160 a03f18c00b371013284c3c9d4b0a1cd8 671 PANTHER PTHR21075 3 658 1.2E-229 T 13-09-2016 PMA3_RS16160 a03f18c00b371013284c3c9d4b0a1cd8 671 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 126 656 3.5E-134 T 13-09-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PMA3_RS16160 a03f18c00b371013284c3c9d4b0a1cd8 671 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 127 657 3.4E-168 T 13-09-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PMA3_RS25360 849e2a0b89db9cba2c1b11b8e47c558d 238 PANTHER PTHR30151 25 237 3.4E-79 T 13-09-2016 PMA3_RS25360 849e2a0b89db9cba2c1b11b8e47c558d 238 PANTHER PTHR30151:SF23 25 237 3.4E-79 T 13-09-2016 PMA3_RS25360 849e2a0b89db9cba2c1b11b8e47c558d 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 236 4.2E-19 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25360 849e2a0b89db9cba2c1b11b8e47c558d 238 Gene3D G3DSA:1.10.3720.10 31 219 1.2E-27 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25360 849e2a0b89db9cba2c1b11b8e47c558d 238 SUPERFAMILY SSF161098 36 220 7.46E-35 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS13100 c76bec4288a9d6446902e3ea14812683 123 Gene3D G3DSA:1.10.10.10 35 103 9.3E-4 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13100 c76bec4288a9d6446902e3ea14812683 123 PIRSF PIRSF029502 1 123 1.4E-41 T 13-09-2016 IPR016921 Uncharacterised conserved protein UCP029502 PMA3_RS13100 c76bec4288a9d6446902e3ea14812683 123 SUPERFAMILY SSF46785 36 104 5.44E-6 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS17325 5cfd0212974171bb726deea150a865cc 128 Pfam PF04343 Protein of unknown function, DUF488 12 120 1.3E-14 T 13-09-2016 IPR007438 Protein of unknown function DUF488 PMA3_RS27445 6de1e533a403c7e49dae4477d541594f 215 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 54 212 2.2E-38 T 13-09-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 PMA3_RS27445 6de1e533a403c7e49dae4477d541594f 215 PANTHER PTHR11237:SF3 1 215 5.9E-126 T 13-09-2016 PMA3_RS27445 6de1e533a403c7e49dae4477d541594f 215 PANTHER PTHR11237 1 215 5.9E-126 T 13-09-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 PMA3_RS27445 6de1e533a403c7e49dae4477d541594f 215 SUPERFAMILY SSF47240 45 186 2.93E-19 T 13-09-2016 IPR009078 Ferritin-like superfamily PMA3_RS27445 6de1e533a403c7e49dae4477d541594f 215 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 14 215 30.081 T 13-09-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 PMA3_RS27445 6de1e533a403c7e49dae4477d541594f 215 Gene3D G3DSA:1.20.1260.10 48 184 3.4E-13 T 13-09-2016 IPR012347 Ferritin-related PMA3_RS23520 54c1e7aae0c6178401d9ad5a5cd11773 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 293 9.5E-17 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23520 54c1e7aae0c6178401d9ad5a5cd11773 302 PANTHER PTHR30193 1 302 5.4E-68 T 13-09-2016 PMA3_RS23520 54c1e7aae0c6178401d9ad5a5cd11773 302 PANTHER PTHR30193:SF10 1 302 5.4E-68 T 13-09-2016 PMA3_RS23520 54c1e7aae0c6178401d9ad5a5cd11773 302 Gene3D G3DSA:1.10.3720.10 28 296 4.3E-43 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23520 54c1e7aae0c6178401d9ad5a5cd11773 302 SUPERFAMILY SSF161098 26 289 4.3E-50 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS16415 4344d4c4c7d7a756214358dd291267f3 147 PIRSF PIRSF015875 1 147 3.8E-47 T 13-09-2016 IPR007418 Protein of unknown function DUF474 PMA3_RS11215 dc30337a38031c296125a1d161cc767d 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 264 1.3E-14 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS11215 dc30337a38031c296125a1d161cc767d 269 SUPERFAMILY SSF161098 10 264 5.42E-58 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS11215 dc30337a38031c296125a1d161cc767d 269 PANTHER PTHR30193 7 265 4.7E-72 T 13-09-2016 PMA3_RS11215 dc30337a38031c296125a1d161cc767d 269 Gene3D G3DSA:1.10.3720.10 14 264 4.9E-53 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS11215 dc30337a38031c296125a1d161cc767d 269 PANTHER PTHR30193:SF20 7 265 4.7E-72 T 13-09-2016 PMA3_RS23410 9b9c1a0d2aace1e6a758ad4d67c3ad9c 241 Pfam PF06271 RDD family 35 156 4.7E-18 T 13-09-2016 IPR010432 RDD PMA3_RS23410 9b9c1a0d2aace1e6a758ad4d67c3ad9c 241 PANTHER PTHR38480 16 220 1.1E-69 T 13-09-2016 PMA3_RS23410 9b9c1a0d2aace1e6a758ad4d67c3ad9c 241 PANTHER PTHR38480:SF1 16 220 1.1E-69 T 13-09-2016 PMA3_RS06945 be378be97058df3a8e4b9f4b91694b72 264 Pfam PF14518 Iron-containing redox enzyme 55 219 2.6E-13 T 13-09-2016 IPR028201 PqqC-like protein PMA3_RS06945 be378be97058df3a8e4b9f4b91694b72 264 Gene3D G3DSA:1.20.910.10 18 254 1.7E-51 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS06945 be378be97058df3a8e4b9f4b91694b72 264 SUPERFAMILY SSF48613 20 243 6.67E-43 T 13-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PMA3_RS10100 22498daba7f3b25c64c2abdec1ae0829 240 PANTHER PTHR11751:SF356 12 107 2.7E-15 T 13-09-2016 PMA3_RS10100 22498daba7f3b25c64c2abdec1ae0829 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 74 5.9E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS10100 22498daba7f3b25c64c2abdec1ae0829 240 Gene3D G3DSA:1.10.10.10 8 82 4.2E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10100 22498daba7f3b25c64c2abdec1ae0829 240 SMART SM00345 23 81 3.2E-8 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS10100 22498daba7f3b25c64c2abdec1ae0829 240 Gene3D G3DSA:1.20.120.530 84 223 1.9E-25 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS10100 22498daba7f3b25c64c2abdec1ae0829 240 PANTHER PTHR11751 12 107 2.7E-15 T 13-09-2016 PMA3_RS10100 22498daba7f3b25c64c2abdec1ae0829 240 Pfam PF07729 FCD domain 91 213 2.0E-22 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS10100 22498daba7f3b25c64c2abdec1ae0829 240 SUPERFAMILY SSF46785 14 85 9.52E-16 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS10100 22498daba7f3b25c64c2abdec1ae0829 240 SUPERFAMILY SSF48008 87 221 8.63E-24 T 13-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PMA3_RS10100 22498daba7f3b25c64c2abdec1ae0829 240 SMART SM00895 91 215 3.2E-16 T 13-09-2016 IPR011711 GntR, C-terminal PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 PANTHER PTHR13789 2 397 8.2E-102 T 13-09-2016 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 Gene3D G3DSA:3.30.9.10 168 271 5.5E-15 T 13-09-2016 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 Gene3D G3DSA:3.30.9.10 326 353 5.5E-15 T 13-09-2016 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 Gene3D G3DSA:3.50.50.60 3 167 3.3E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 Gene3D G3DSA:3.50.50.60 276 316 3.3E-49 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 SUPERFAMILY SSF51905 265 369 3.4E-61 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 SUPERFAMILY SSF51905 5 176 3.4E-61 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 PANTHER PTHR13789:SF90 2 397 8.2E-102 T 13-09-2016 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 Pfam PF01494 FAD binding domain 4 342 1.4E-82 T 13-09-2016 IPR002938 FAD-binding domain GO:0071949 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 329 345 3.6E-43 T 13-09-2016 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.6E-43 T 13-09-2016 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 311 329 3.6E-43 T 13-09-2016 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.6E-43 T 13-09-2016 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.6E-43 T 13-09-2016 PMA3_RS19885 deaa9fac45e978810d3fe72d83a3ad6f 511 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 3.6E-43 T 13-09-2016 PMA3_RS06910 fea084b0e8a78b72732363c5fef7fe22 99 SUPERFAMILY SSF82657 2 84 5.75E-29 T 13-09-2016 IPR002634 BolA protein PMA3_RS06910 fea084b0e8a78b72732363c5fef7fe22 99 Pfam PF01722 BolA-like protein 14 80 2.1E-24 T 13-09-2016 IPR002634 BolA protein PMA3_RS06910 fea084b0e8a78b72732363c5fef7fe22 99 Gene3D G3DSA:3.30.300.90 1 97 1.1E-29 T 13-09-2016 IPR002634 BolA protein PMA3_RS06910 fea084b0e8a78b72732363c5fef7fe22 99 PANTHER PTHR12735 3 99 9.5E-32 T 13-09-2016 PMA3_RS06910 fea084b0e8a78b72732363c5fef7fe22 99 PIRSF PIRSF003113 1 95 1.3E-31 T 13-09-2016 IPR002634 BolA protein PMA3_RS06910 fea084b0e8a78b72732363c5fef7fe22 99 PANTHER PTHR12735:SF3 3 99 9.5E-32 T 13-09-2016 PMA3_RS18525 68a2fdae573e139d1c098e758b738b57 412 PANTHER PTHR11706 1 218 3.9E-71 T 13-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PMA3_RS18525 68a2fdae573e139d1c098e758b738b57 412 PANTHER PTHR11706:SF2 1 218 3.9E-71 T 13-09-2016 PMA3_RS18525 68a2fdae573e139d1c098e758b738b57 412 Pfam PF01566 Natural resistance-associated macrophage protein 43 374 2.1E-18 T 13-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PMA3_RS10355 b5f8cfd58bc25a14ce9afe9c488e3707 421 SUPERFAMILY SSF103473 5 410 1.28E-38 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS10355 b5f8cfd58bc25a14ce9afe9c488e3707 421 PANTHER PTHR11662:SF283 33 409 2.7E-48 T 13-09-2016 PMA3_RS10355 b5f8cfd58bc25a14ce9afe9c488e3707 421 PANTHER PTHR11662 33 409 2.7E-48 T 13-09-2016 PMA3_RS10355 b5f8cfd58bc25a14ce9afe9c488e3707 421 Gene3D G3DSA:1.20.1250.20 209 410 3.3E-11 T 13-09-2016 PMA3_RS10355 b5f8cfd58bc25a14ce9afe9c488e3707 421 Pfam PF07690 Major Facilitator Superfamily 35 351 1.6E-16 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS10355 b5f8cfd58bc25a14ce9afe9c488e3707 421 Gene3D G3DSA:1.20.1250.20 4 193 1.9E-17 T 13-09-2016 PMA3_RS06440 9f82f7715771bdbe03a21fbc176f59cc 214 Pfam PF13462 Thioredoxin 49 195 3.6E-22 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06440 9f82f7715771bdbe03a21fbc176f59cc 214 PANTHER PTHR13887 5 206 1.2E-25 T 13-09-2016 PMA3_RS06440 9f82f7715771bdbe03a21fbc176f59cc 214 Gene3D G3DSA:3.40.30.10 48 204 2.7E-36 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06440 9f82f7715771bdbe03a21fbc176f59cc 214 SUPERFAMILY SSF52833 47 203 1.62E-37 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS20135 892ce3d8179f5c25d33d821d514ea2d3 542 SUPERFAMILY SSF48056 251 443 4.41E-7 T 13-09-2016 IPR008922 Uncharacterised domain, di-copper centre PMA3_RS07805 2672542b347e40da07d8014b3cc29721 434 Pfam PF06181 Protein of unknown function (DUF989) 4 292 8.6E-124 T 13-09-2016 IPR010389 Domain of unknown function DUF989 PMA3_RS07805 2672542b347e40da07d8014b3cc29721 434 SUPERFAMILY SSF46626 345 432 7.56E-5 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS21470 cbfad577082cc11ce2385dceb843127c 277 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS21470 cbfad577082cc11ce2385dceb843127c 277 PANTHER PTHR24220:SF408 6 265 2.6E-121 T 13-09-2016 PMA3_RS21470 cbfad577082cc11ce2385dceb843127c 277 PANTHER PTHR24220 6 265 2.6E-121 T 13-09-2016 PMA3_RS21470 cbfad577082cc11ce2385dceb843127c 277 Pfam PF00005 ABC transporter 22 181 5.8E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS21470 cbfad577082cc11ce2385dceb843127c 277 SUPERFAMILY SSF52540 4 243 4.61E-59 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS21470 cbfad577082cc11ce2385dceb843127c 277 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 5 250 1.1E-88 T 13-09-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 PMA3_RS21470 cbfad577082cc11ce2385dceb843127c 277 SMART SM00382 29 239 4.1E-12 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS21470 cbfad577082cc11ce2385dceb843127c 277 Gene3D G3DSA:3.40.50.300 2 243 3.3E-64 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09275 f60d60d30ffe5e8f7e27e05d6fdbcb57 121 Pfam PF05036 Sporulation related domain 69 99 2.5E-4 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS09275 f60d60d30ffe5e8f7e27e05d6fdbcb57 121 Gene3D G3DSA:3.30.70.1070 66 101 5.8E-5 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS09275 f60d60d30ffe5e8f7e27e05d6fdbcb57 121 SUPERFAMILY SSF110997 63 101 6.41E-5 T 13-09-2016 IPR007730 Sporulation-related domain GO:0042834 PMA3_RS12700 e130cbd0b3959bff7f534f0edb4693ed 300 PANTHER PTHR30177 15 285 3.7E-59 T 13-09-2016 PMA3_RS12700 e130cbd0b3959bff7f534f0edb4693ed 300 Gene3D G3DSA:3.40.190.100 115 234 1.3E-30 T 13-09-2016 PMA3_RS12700 e130cbd0b3959bff7f534f0edb4693ed 300 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 33 279 2.4E-56 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS12700 e130cbd0b3959bff7f534f0edb4693ed 300 SUPERFAMILY SSF53850 26 295 3.06E-64 T 13-09-2016 PMA3_RS12700 e130cbd0b3959bff7f534f0edb4693ed 300 PANTHER PTHR30177:SF0 15 285 3.7E-59 T 13-09-2016 PMA3_RS12700 e130cbd0b3959bff7f534f0edb4693ed 300 Gene3D G3DSA:3.40.190.10 235 295 3.1E-35 T 13-09-2016 PMA3_RS12700 e130cbd0b3959bff7f534f0edb4693ed 300 Gene3D G3DSA:3.40.190.10 29 114 3.1E-35 T 13-09-2016 PMA3_RS06565 2efc94fbe6de91590e1c176402d12f9f 247 Pfam PF01026 TatD related DNase 3 240 1.9E-37 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS06565 2efc94fbe6de91590e1c176402d12f9f 247 PIRSF PIRSF005902 1 244 2.7E-36 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS06565 2efc94fbe6de91590e1c176402d12f9f 247 SUPERFAMILY SSF51556 2 241 1.78E-43 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS06565 2efc94fbe6de91590e1c176402d12f9f 247 Gene3D G3DSA:3.20.20.140 2 239 7.9E-39 T 13-09-2016 PMA3_RS06565 2efc94fbe6de91590e1c176402d12f9f 247 PANTHER PTHR10060 3 244 9.6E-36 T 13-09-2016 IPR001130 TatD family GO:0016788 PMA3_RS06535 72345acab789e7d9d4aec94f776d5240 80 SUPERFAMILY SSF89447 6 71 1.31E-6 T 13-09-2016 PMA3_RS06535 72345acab789e7d9d4aec94f776d5240 80 Gene3D G3DSA:2.10.260.10 6 71 1.0E-5 T 13-09-2016 PMA3_RS06955 17f0ad5c1702799525e6bfb3abc8f280 321 Pfam PF01758 Sodium Bile acid symporter family 42 218 1.2E-42 T 13-09-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PMA3_RS06955 17f0ad5c1702799525e6bfb3abc8f280 321 PANTHER PTHR10361 1 306 1.5E-89 T 13-09-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 Pfam PF00303 Thymidylate synthase 2 323 9.1E-87 T 13-09-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 SUPERFAMILY SSF55831 1 124 2.09E-99 T 13-09-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 SUPERFAMILY SSF55831 151 323 2.09E-99 T 13-09-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 323 2.1E-60 T 13-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 Gene3D G3DSA:3.30.572.10 1 323 2.1E-99 T 13-09-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 PRINTS PR00108 Thymidylate synthase family signature 207 233 1.0E-28 T 13-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 PRINTS PR00108 Thymidylate synthase family signature 187 202 1.0E-28 T 13-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 PRINTS PR00108 Thymidylate synthase family signature 245 262 1.0E-28 T 13-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.0E-28 T 13-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 PRINTS PR00108 Thymidylate synthase family signature 161 180 1.0E-28 T 13-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 Hamap MF_00008 Thymidylate synthase [thyA]. 1 323 37.824 T 13-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 PANTHER PTHR11548 1 118 3.4E-88 T 13-09-2016 PMA3_RS28740 9997f688bc712f6a991c79667b34b71e 323 PANTHER PTHR11548 139 323 3.4E-88 T 13-09-2016 PMA3_RS20785 1489b5ea3ed7f25f51374d3965008c51 348 PANTHER PTHR14226 1 185 8.2E-98 T 13-09-2016 PMA3_RS20785 1489b5ea3ed7f25f51374d3965008c51 348 PANTHER PTHR14226 241 347 8.2E-98 T 13-09-2016 PMA3_RS20785 1489b5ea3ed7f25f51374d3965008c51 348 Pfam PF01734 Patatin-like phospholipase 7 163 4.6E-15 T 13-09-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PMA3_RS20785 1489b5ea3ed7f25f51374d3965008c51 348 Gene3D G3DSA:3.40.1090.10 7 166 2.6E-8 T 13-09-2016 PMA3_RS20785 1489b5ea3ed7f25f51374d3965008c51 348 PANTHER PTHR14226:SF24 1 185 8.2E-98 T 13-09-2016 PMA3_RS20785 1489b5ea3ed7f25f51374d3965008c51 348 PANTHER PTHR14226:SF24 241 347 8.2E-98 T 13-09-2016 PMA3_RS20785 1489b5ea3ed7f25f51374d3965008c51 348 SUPERFAMILY SSF52151 259 343 2.51E-52 T 13-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PMA3_RS20785 1489b5ea3ed7f25f51374d3965008c51 348 SUPERFAMILY SSF52151 2 178 2.51E-52 T 13-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PMA3_RS01890 90becee8bbada35e129a33bd432280e2 110 SUPERFAMILY SSF103481 5 106 5.62E-20 T 13-09-2016 PMA3_RS01890 90becee8bbada35e129a33bd432280e2 110 PANTHER PTHR30561 1 110 4.9E-49 T 13-09-2016 PMA3_RS01890 90becee8bbada35e129a33bd432280e2 110 PANTHER PTHR30561:SF1 1 110 4.9E-49 T 13-09-2016 PMA3_RS01890 90becee8bbada35e129a33bd432280e2 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 1.1E-26 T 13-09-2016 IPR000390 Small multidrug resistance protein family GO:0016021 PMA3_RS24580 ac210a835ea0b0aa9b1063e8c5501448 80 SUPERFAMILY SSF54285 3 80 2.8E-18 T 13-09-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PMA3_RS24580 ac210a835ea0b0aa9b1063e8c5501448 80 Pfam PF02597 ThiS family 5 80 8.5E-19 T 13-09-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 PMA3_RS24580 ac210a835ea0b0aa9b1063e8c5501448 80 Gene3D G3DSA:3.10.20.30 1 80 1.6E-21 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS24580 ac210a835ea0b0aa9b1063e8c5501448 80 PANTHER PTHR33359 1 80 3.9E-20 T 13-09-2016 PMA3_RS14475 a388af904df5907e7592d1e7d2945e05 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 288 4.1E-51 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS14475 a388af904df5907e7592d1e7d2945e05 304 PANTHER PTHR11795 1 304 2.5E-123 T 13-09-2016 PMA3_RS14475 a388af904df5907e7592d1e7d2945e05 304 PANTHER PTHR11795:SF371 1 304 2.5E-123 T 13-09-2016 PMA3_RS15770 bd568b926f2483e18361fc19e3e59eb6 411 Pfam PF00676 Dehydrogenase E1 component 82 378 4.5E-100 T 13-09-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 PMA3_RS15770 bd568b926f2483e18361fc19e3e59eb6 411 Gene3D G3DSA:3.40.50.970 10 408 1.6E-122 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS15770 bd568b926f2483e18361fc19e3e59eb6 411 SUPERFAMILY SSF52518 5 408 1.48E-89 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS15770 bd568b926f2483e18361fc19e3e59eb6 411 PANTHER PTHR11516:SF31 1 411 1.9E-262 T 13-09-2016 PMA3_RS15770 bd568b926f2483e18361fc19e3e59eb6 411 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 6 46 5.2E-19 T 13-09-2016 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 PMA3_RS15770 bd568b926f2483e18361fc19e3e59eb6 411 PANTHER PTHR11516 1 411 1.9E-262 T 13-09-2016 PMA3_RS27425 6c087fc437e7c9d69b99e81cb65baa17 322 SUPERFAMILY SSF51412 8 307 2.2E-55 T 13-09-2016 PMA3_RS27425 6c087fc437e7c9d69b99e81cb65baa17 322 PANTHER PTHR32332:SF21 2 322 3.5E-190 T 13-09-2016 PMA3_RS27425 6c087fc437e7c9d69b99e81cb65baa17 322 Gene3D G3DSA:3.20.20.70 9 299 4.1E-45 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS27425 6c087fc437e7c9d69b99e81cb65baa17 322 PANTHER PTHR32332 2 322 3.5E-190 T 13-09-2016 PMA3_RS27425 6c087fc437e7c9d69b99e81cb65baa17 322 Pfam PF03060 Nitronate monooxygenase 87 302 2.3E-26 T 13-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PMA3_RS13395 107628815237cc396c585764ced1f059 436 SUPERFAMILY SSF53850 25 408 2.07E-78 T 13-09-2016 PMA3_RS13395 107628815237cc396c585764ced1f059 436 Gene3D G3DSA:3.40.190.10 140 347 2.2E-49 T 13-09-2016 PMA3_RS13395 107628815237cc396c585764ced1f059 436 PANTHER PTHR30061:SF3 1 434 4.1E-147 T 13-09-2016 PMA3_RS13395 107628815237cc396c585764ced1f059 436 Gene3D G3DSA:3.40.190.10 23 89 7.4E-5 T 13-09-2016 PMA3_RS13395 107628815237cc396c585764ced1f059 436 PANTHER PTHR30061 1 434 4.1E-147 T 13-09-2016 PMA3_RS13395 107628815237cc396c585764ced1f059 436 Pfam PF01547 Bacterial extracellular solute-binding protein 40 327 3.2E-52 T 13-09-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 PMA3_RS02290 7970e627956bf661f9f6dea36ea5a117 210 Gene3D G3DSA:1.10.357.10 3 196 2.3E-26 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS02290 7970e627956bf661f9f6dea36ea5a117 210 PANTHER PTHR30055:SF39 1 204 4.8E-82 T 13-09-2016 PMA3_RS02290 7970e627956bf661f9f6dea36ea5a117 210 SUPERFAMILY SSF46689 3 74 6.16E-12 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS02290 7970e627956bf661f9f6dea36ea5a117 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 2.7E-8 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS02290 7970e627956bf661f9f6dea36ea5a117 210 PANTHER PTHR30055 1 204 4.8E-82 T 13-09-2016 PMA3_RS20475 326f6d3018dc6a9dde9f7c72e97c6cff 272 PANTHER PTHR31756:SF3 1 272 1.2E-112 T 13-09-2016 PMA3_RS20475 326f6d3018dc6a9dde9f7c72e97c6cff 272 PANTHER PTHR31756 1 272 1.2E-112 T 13-09-2016 PMA3_RS20475 326f6d3018dc6a9dde9f7c72e97c6cff 272 Pfam PF03618 Kinase/pyrophosphorylase 6 262 1.7E-77 T 13-09-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 PMA3_RS20475 326f6d3018dc6a9dde9f7c72e97c6cff 272 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 271 76.77 T 13-09-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein PMA3_RS21595 a85b0ee930ed6bae1c6de4b491ebc0c9 262 PIRSF PIRSF002884 25 262 5.2E-90 T 13-09-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- PMA3_RS21595 a85b0ee930ed6bae1c6de4b491ebc0c9 262 Gene3D G3DSA:1.10.287.500 76 201 4.0E-45 T 13-09-2016 PMA3_RS21595 a85b0ee930ed6bae1c6de4b491ebc0c9 262 PANTHER PTHR22617:SF35 64 262 4.6E-62 T 13-09-2016 PMA3_RS21595 a85b0ee930ed6bae1c6de4b491ebc0c9 262 Pfam PF04344 Chemotaxis phosphatase, CheZ 49 262 2.8E-72 T 13-09-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- PMA3_RS21595 a85b0ee930ed6bae1c6de4b491ebc0c9 262 SUPERFAMILY SSF75708 37 261 4.45E-60 T 13-09-2016 PMA3_RS21595 a85b0ee930ed6bae1c6de4b491ebc0c9 262 PANTHER PTHR22617 64 262 4.6E-62 T 13-09-2016 PMA3_RS23325 dbf365f9f27bb772bfc76ca0808d3357 305 PANTHER PTHR21708 1 294 5.8E-64 T 13-09-2016 PMA3_RS23325 dbf365f9f27bb772bfc76ca0808d3357 305 SUPERFAMILY SSF51735 4 157 1.53E-31 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23325 dbf365f9f27bb772bfc76ca0808d3357 305 SUPERFAMILY SSF48179 176 295 1.7E-30 T 13-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PMA3_RS23325 dbf365f9f27bb772bfc76ca0808d3357 305 Gene3D G3DSA:1.10.1040.10 185 294 2.6E-33 T 13-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PMA3_RS23325 dbf365f9f27bb772bfc76ca0808d3357 305 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 176 294 1.3E-29 T 13-09-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS23325 dbf365f9f27bb772bfc76ca0808d3357 305 PANTHER PTHR21708:SF24 1 294 5.8E-64 T 13-09-2016 PMA3_RS23325 dbf365f9f27bb772bfc76ca0808d3357 305 Gene3D G3DSA:3.40.50.720 3 184 2.4E-41 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23325 dbf365f9f27bb772bfc76ca0808d3357 305 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 4 295 1.7E-73 T 13-09-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS23325 dbf365f9f27bb772bfc76ca0808d3357 305 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 152 1.3E-34 T 13-09-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PMA3_RS30340 9f64cc0e96ee02176b2fb97102ef261f 292 PANTHER PTHR14859:SF0 69 272 1.8E-36 T 13-09-2016 PMA3_RS30340 9f64cc0e96ee02176b2fb97102ef261f 292 PANTHER PTHR14859:SF0 32 52 1.8E-36 T 13-09-2016 PMA3_RS30340 9f64cc0e96ee02176b2fb97102ef261f 292 PANTHER PTHR14859 69 272 1.8E-36 T 13-09-2016 IPR027317 PGAP2-interacting protein PMA3_RS30340 9f64cc0e96ee02176b2fb97102ef261f 292 PANTHER PTHR14859 32 52 1.8E-36 T 13-09-2016 IPR027317 PGAP2-interacting protein PMA3_RS30340 9f64cc0e96ee02176b2fb97102ef261f 292 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 262 3.2E-19 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS30340 9f64cc0e96ee02176b2fb97102ef261f 292 Gene3D G3DSA:3.60.10.10 34 270 2.4E-7 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS30340 9f64cc0e96ee02176b2fb97102ef261f 292 SUPERFAMILY SSF56219 27 273 5.63E-33 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS07960 7fc607cd1992ea603264ea97bad9724f 182 Pfam PF13778 Domain of unknown function (DUF4174) 27 144 4.6E-23 T 13-09-2016 IPR025232 Domain of unknown function DUF4174 PMA3_RS21485 0f08010ad71e75c824314cfb079a62a2 157 PANTHER PTHR30009 5 152 2.0E-50 T 13-09-2016 PMA3_RS21485 0f08010ad71e75c824314cfb079a62a2 157 PANTHER PTHR30009:SF6 5 152 2.0E-50 T 13-09-2016 PMA3_RS21485 0f08010ad71e75c824314cfb079a62a2 157 Pfam PF03918 Cytochrome C biogenesis protein 9 151 1.6E-54 T 13-09-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family PMA3_RS15550 b503def2a859a00988e9b6c5ede5830a 83 Pfam PF07865 Protein of unknown function (DUF1652) 6 71 7.0E-24 T 13-09-2016 IPR012448 Protein of unknown function DUF1652 PMA3_RS14480 b2167f3c2f59a3a4ec4b4494480a99c2 367 PANTHER PTHR30483 1 363 6.3E-97 T 13-09-2016 PMA3_RS14480 b2167f3c2f59a3a4ec4b4494480a99c2 367 PANTHER PTHR30483:SF20 1 363 6.3E-97 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS14480 b2167f3c2f59a3a4ec4b4494480a99c2 367 SUPERFAMILY SSF53822 24 365 2.55E-88 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS14480 b2167f3c2f59a3a4ec4b4494480a99c2 367 Pfam PF13458 Periplasmic binding protein 26 362 7.0E-60 T 13-09-2016 IPR028081 Leucine-binding protein domain PMA3_RS14480 b2167f3c2f59a3a4ec4b4494480a99c2 367 Gene3D G3DSA:3.40.50.2300 25 224 1.2E-57 T 13-09-2016 PMA3_RS14480 b2167f3c2f59a3a4ec4b4494480a99c2 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 6.2E-20 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS14480 b2167f3c2f59a3a4ec4b4494480a99c2 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 6.2E-20 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS14480 b2167f3c2f59a3a4ec4b4494480a99c2 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 328 343 6.2E-20 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS14480 b2167f3c2f59a3a4ec4b4494480a99c2 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 6.2E-20 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS14480 b2167f3c2f59a3a4ec4b4494480a99c2 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 6.2E-20 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 SUPERFAMILY SSF52540 24 105 7.97E-7 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 Pfam PF00271 Helicase conserved C-terminal domain 242 344 6.9E-26 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 SMART SM00487 20 227 2.4E-61 T 13-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 Gene3D G3DSA:3.40.50.300 217 377 4.1E-53 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 SMART SM00490 263 344 3.0E-31 T 13-09-2016 IPR001650 Helicase, C-terminal PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 533 49.012 T 13-09-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 Pfam PF00270 DEAD/DEAH box helicase 25 201 2.6E-46 T 13-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 PANTHER PTHR24031 1 472 2.3E-208 T 13-09-2016 PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 SUPERFAMILY SSF52540 79 365 3.68E-71 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 PANTHER PTHR24031:SF0 1 472 2.3E-208 T 13-09-2016 PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 13-09-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PMA3_RS28290 8a898b6de64c55e51c6157bc6fdce8c9 626 Gene3D G3DSA:3.40.50.300 1 216 9.1E-79 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS09320 bfc6297cfb74c95ef3f0d18f5106919f 134 PANTHER PTHR37831:SF1 2 134 4.4E-50 T 13-09-2016 PMA3_RS09320 bfc6297cfb74c95ef3f0d18f5106919f 134 Pfam PF05025 RbsD / FucU transport protein family 1 133 5.2E-44 T 13-09-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 PMA3_RS09320 bfc6297cfb74c95ef3f0d18f5106919f 134 SUPERFAMILY SSF102546 1 134 5.62E-42 T 13-09-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 PMA3_RS09320 bfc6297cfb74c95ef3f0d18f5106919f 134 Gene3D G3DSA:3.40.1650.10 1 134 1.2E-32 T 13-09-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 PMA3_RS09320 bfc6297cfb74c95ef3f0d18f5106919f 134 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 134 30.824 T 13-09-2016 IPR023064 D-ribose pyranase GO:0016872 UniPathway: UPA00916 PMA3_RS09320 bfc6297cfb74c95ef3f0d18f5106919f 134 PANTHER PTHR37831 2 134 4.4E-50 T 13-09-2016 PMA3_RS15975 8c2d4c74772ef4460eb01d6bbfa7746a 100 Gene3D G3DSA:4.10.1210.10 1 92 3.3E-37 T 13-09-2016 IPR015073 Atu1913-like PMA3_RS15975 8c2d4c74772ef4460eb01d6bbfa7746a 100 Pfam PF08980 Domain of unknown function (DUF1883) 1 75 3.3E-31 T 13-09-2016 IPR015073 Atu1913-like PMA3_RS15975 8c2d4c74772ef4460eb01d6bbfa7746a 100 SUPERFAMILY SSF141099 1 96 1.28E-37 T 13-09-2016 IPR015073 Atu1913-like PMA3_RS05705 7509872c497836112d8ed381ca40338b 108 Pfam PF03869 Arc-like DNA binding domain 11 59 9.4E-26 T 13-09-2016 IPR005569 Arc-like DNA binding domain GO:0003677 PMA3_RS05705 7509872c497836112d8ed381ca40338b 108 SUPERFAMILY SSF47598 12 57 1.47E-14 T 13-09-2016 IPR010985 Ribbon-helix-helix GO:0006355 PMA3_RS05705 7509872c497836112d8ed381ca40338b 108 Gene3D G3DSA:1.10.1220.10 11 67 4.8E-22 T 13-09-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PMA3_RS24615 59ba9dc14de8838f97042edd4ce8c7f1 389 SUPERFAMILY SSF141371 10 131 1.41E-15 T 13-09-2016 PMA3_RS24615 59ba9dc14de8838f97042edd4ce8c7f1 389 Pfam PF13437 HlyD family secretion protein 262 357 4.7E-9 T 13-09-2016 PMA3_RS24615 59ba9dc14de8838f97042edd4ce8c7f1 389 Gene3D G3DSA:2.40.10.220 17 115 3.1E-7 T 13-09-2016 PMA3_RS24615 59ba9dc14de8838f97042edd4ce8c7f1 389 Pfam PF07238 PilZ domain 16 116 3.0E-13 T 13-09-2016 IPR009875 PilZ domain GO:0035438 PMA3_RS24615 59ba9dc14de8838f97042edd4ce8c7f1 389 Gene3D G3DSA:2.40.50.100 121 135 3.7E-4 T 13-09-2016 PMA3_RS24615 59ba9dc14de8838f97042edd4ce8c7f1 389 Gene3D G3DSA:2.40.50.100 260 293 3.7E-4 T 13-09-2016 PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 SUPERFAMILY SSF55874 294 454 7.73E-36 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 SMART SM00387 350 460 2.8E-28 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 7.5E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 7.5E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 7.5E-9 T 13-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 453 5.9E-18 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 PANTHER PTHR24423 181 451 8.8E-58 T 13-09-2016 PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 SUPERFAMILY SSF158472 185 236 1.83E-7 T 13-09-2016 PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 Gene3D G3DSA:3.30.565.10 312 455 1.6E-34 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 Gene3D G3DSA:1.10.287.130 228 299 1.1E-9 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 SMART SM00304 184 237 5.9E-9 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 SUPERFAMILY SSF47384 221 303 4.12E-11 T 13-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PMA3_RS10805 4a16194c89442e3fc557edd8ce208aad 464 Pfam PF00672 HAMP domain 165 234 3.6E-11 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS12985 6d8de4064b4b3132a5079c73df2d054a 214 Pfam PF14559 Tetratricopeptide repeat 136 188 4.1E-8 T 13-09-2016 PMA3_RS12985 6d8de4064b4b3132a5079c73df2d054a 214 Gene3D G3DSA:1.25.40.10 94 187 2.8E-15 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS12985 6d8de4064b4b3132a5079c73df2d054a 214 SUPERFAMILY SSF48452 92 188 5.55E-15 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS25810 caa2c4bc7fd0f0e18e1778478def8ac3 70 SUPERFAMILY SSF47598 3 69 8.9E-12 T 13-09-2016 IPR010985 Ribbon-helix-helix GO:0006355 PMA3_RS25810 caa2c4bc7fd0f0e18e1778478def8ac3 70 Gene3D G3DSA:1.10.1220.10 11 48 9.0E-5 T 13-09-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PMA3_RS25810 caa2c4bc7fd0f0e18e1778478def8ac3 70 Pfam PF05509 TraY domain 9 37 7.0E-5 T 13-09-2016 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 PMA3_RS04680 f2872409281bee7cbb249f3e33f2f085 286 Pfam PF01904 Protein of unknown function DUF72 22 259 8.2E-55 T 13-09-2016 IPR002763 Protein of unknown function DUF72 PMA3_RS04680 f2872409281bee7cbb249f3e33f2f085 286 PANTHER PTHR30348 6 273 1.1E-73 T 13-09-2016 PMA3_RS04680 f2872409281bee7cbb249f3e33f2f085 286 PANTHER PTHR30348:SF3 6 273 1.1E-73 T 13-09-2016 PMA3_RS04680 f2872409281bee7cbb249f3e33f2f085 286 SUPERFAMILY SSF117396 3 261 1.07E-66 T 13-09-2016 IPR002763 Protein of unknown function DUF72 PMA3_RS04680 f2872409281bee7cbb249f3e33f2f085 286 Gene3D G3DSA:3.20.20.410 4 272 2.3E-68 T 13-09-2016 IPR002763 Protein of unknown function DUF72 PMA3_RS28865 688d3381f586702a0c4c5ad689ca2b50 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 258 5.5E-14 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28865 688d3381f586702a0c4c5ad689ca2b50 297 PANTHER PTHR30222 1 277 1.8E-81 T 13-09-2016 PMA3_RS28865 688d3381f586702a0c4c5ad689ca2b50 297 Gene3D G3DSA:1.10.3720.10 2 266 5.3E-55 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28865 688d3381f586702a0c4c5ad689ca2b50 297 PANTHER PTHR30222:SF1 1 277 1.8E-81 T 13-09-2016 PMA3_RS28865 688d3381f586702a0c4c5ad689ca2b50 297 SUPERFAMILY SSF161098 4 261 3.27E-49 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS04050 9e6ab6b953598e0918f5e5e4c3cb3627 403 PIRSF PIRSF038885 1 403 4.3E-158 T 13-09-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 PMA3_RS04050 9e6ab6b953598e0918f5e5e4c3cb3627 403 SUPERFAMILY SSF81648 281 396 3.49E-33 T 13-09-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 PMA3_RS04050 9e6ab6b953598e0918f5e5e4c3cb3627 403 Gene3D G3DSA:1.20.810.10 5 399 6.4E-160 T 13-09-2016 IPR027387 Cytochrome b/b6-like domain PMA3_RS04050 9e6ab6b953598e0918f5e5e4c3cb3627 403 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 278 379 8.3E-43 T 13-09-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 PMA3_RS04050 9e6ab6b953598e0918f5e5e4c3cb3627 403 PANTHER PTHR19271:SF9 1 401 2.2E-259 T 13-09-2016 PMA3_RS04050 9e6ab6b953598e0918f5e5e4c3cb3627 403 PANTHER PTHR19271 1 401 2.2E-259 T 13-09-2016 PMA3_RS04050 9e6ab6b953598e0918f5e5e4c3cb3627 403 Pfam PF00033 Cytochrome b/b6/petB 24 211 1.1E-66 T 13-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PMA3_RS04050 9e6ab6b953598e0918f5e5e4c3cb3627 403 SUPERFAMILY SSF81342 6 276 7.53E-95 T 13-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PMA3_RS10925 ab98c5285845e0c9a68dd9f70597df18 175 Pfam PF11286 Protein of unknown function (DUF3087) 2 167 5.9E-58 T 13-09-2016 IPR021438 Protein of unknown function DUF3087 PMA3_RS19455 74786eac3c0f854bb040b48a6c29bc5d 580 PANTHER PTHR22642 1 577 5.7E-190 T 13-09-2016 PMA3_RS19455 74786eac3c0f854bb040b48a6c29bc5d 580 Gene3D G3DSA:3.20.20.140 228 520 2.5E-24 T 13-09-2016 PMA3_RS19455 74786eac3c0f854bb040b48a6c29bc5d 580 Pfam PF07969 Amidohydrolase family 73 576 2.3E-63 T 13-09-2016 IPR013108 Amidohydrolase 3 PMA3_RS19455 74786eac3c0f854bb040b48a6c29bc5d 580 Gene3D G3DSA:2.30.40.10 15 115 1.8E-18 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19455 74786eac3c0f854bb040b48a6c29bc5d 580 SUPERFAMILY SSF51338 535 576 2.73E-22 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19455 74786eac3c0f854bb040b48a6c29bc5d 580 SUPERFAMILY SSF51338 19 83 2.73E-22 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19455 74786eac3c0f854bb040b48a6c29bc5d 580 SUPERFAMILY SSF51556 82 103 7.19E-33 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS19455 74786eac3c0f854bb040b48a6c29bc5d 580 SUPERFAMILY SSF51556 226 536 7.19E-33 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS19455 74786eac3c0f854bb040b48a6c29bc5d 580 Gene3D G3DSA:2.30.40.10 521 576 1.4E-9 T 13-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PMA3_RS19455 74786eac3c0f854bb040b48a6c29bc5d 580 PANTHER PTHR22642:SF9 1 577 5.7E-190 T 13-09-2016 PMA3_RS04570 fa7b3bcf3d1de179f5e686bb8b67617c 242 SUPERFAMILY SSF158682 89 237 1.22E-22 T 13-09-2016 IPR029024 TerB-like PMA3_RS04570 fa7b3bcf3d1de179f5e686bb8b67617c 242 Gene3D G3DSA:1.10.3680.10 88 237 6.8E-22 T 13-09-2016 IPR029024 TerB-like PMA3_RS04570 fa7b3bcf3d1de179f5e686bb8b67617c 242 Pfam PF04391 Protein of unknown function (DUF533) 54 235 2.0E-63 T 13-09-2016 IPR007486 Inner membrane protein YebE PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 PANTHER PTHR11751:SF306 18 399 2.7E-149 T 13-09-2016 PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 SUPERFAMILY SSF53383 7 402 6.88E-110 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 240 253 - T 13-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 Gene3D G3DSA:3.40.640.10 49 278 2.0E-71 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 PANTHER PTHR11751 18 399 2.7E-149 T 13-09-2016 PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 Gene3D G3DSA:3.90.1150.10 279 403 3.9E-41 T 13-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 166 190 7.2E-11 T 13-09-2016 PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 234 258 7.2E-11 T 13-09-2016 PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 119 140 7.2E-11 T 13-09-2016 PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 203 226 7.2E-11 T 13-09-2016 PMA3_RS26145 e2a71413e66c4fb9c1bdbbef4cad954e 404 Pfam PF00155 Aminotransferase class I and II 36 396 8.7E-75 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS26230 5464270e6f86e393a4c346cd6f8c566d 131 Pfam PF04120 Low affinity iron permease 3 114 1.5E-46 T 13-09-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 PMA3_RS21895 7843d4303b1713d7ec3428fbbbb759b7 209 Pfam PF01300 Telomere recombination 22 198 2.7E-43 T 13-09-2016 IPR006070 YrdC-like domain GO:0003725 PMA3_RS21895 7843d4303b1713d7ec3428fbbbb759b7 209 PANTHER PTHR17490 2 206 4.2E-92 T 13-09-2016 PMA3_RS21895 7843d4303b1713d7ec3428fbbbb759b7 209 PANTHER PTHR17490:SF7 2 206 4.2E-92 T 13-09-2016 PMA3_RS21895 7843d4303b1713d7ec3428fbbbb759b7 209 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 6.2E-62 T 13-09-2016 IPR006070 YrdC-like domain GO:0003725 PMA3_RS21895 7843d4303b1713d7ec3428fbbbb759b7 209 Gene3D G3DSA:3.90.870.10 3 202 3.9E-61 T 13-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PMA3_RS21895 7843d4303b1713d7ec3428fbbbb759b7 209 SUPERFAMILY SSF55821 2 204 2.08E-63 T 13-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PMA3_RS17010 9f97b2976320fbd6586de350b1949ff9 241 SUPERFAMILY SSF89733 1 133 9.03E-13 T 13-09-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS17010 9f97b2976320fbd6586de350b1949ff9 241 Pfam PF12525 Protein of unknown function (DUF3726) 3 80 2.2E-24 T 13-09-2016 IPR022201 Protein of unknown function DUF3726 PMA3_RS17010 9f97b2976320fbd6586de350b1949ff9 241 Gene3D G3DSA:1.10.1530.10 1 108 1.2E-6 T 13-09-2016 PMA3_RS28675 75c783c65eef242b1672c534ceaad9ad 351 Gene3D G3DSA:3.40.50.1000 163 293 9.0E-10 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS28675 75c783c65eef242b1672c534ceaad9ad 351 Gene3D G3DSA:3.40.50.1000 41 65 9.0E-10 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS28675 75c783c65eef242b1672c534ceaad9ad 351 SUPERFAMILY SSF56784 45 231 1.1E-11 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS29225 30249df2eda7a3a116db1a0fe5ee750f 380 PANTHER PTHR38043 2 372 1.5E-55 T 13-09-2016 PMA3_RS29225 30249df2eda7a3a116db1a0fe5ee750f 380 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 29 358 2.5E-89 T 13-09-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX PMA3_RS24470 8fd1075a056706aaa66b4c7ab816a696 164 Gene3D G3DSA:3.30.1330.40 16 158 1.8E-43 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS24470 8fd1075a056706aaa66b4c7ab816a696 164 SUPERFAMILY SSF55298 16 158 2.51E-41 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS24470 8fd1075a056706aaa66b4c7ab816a696 164 PANTHER PTHR11803 16 160 9.0E-26 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS24470 8fd1075a056706aaa66b4c7ab816a696 164 PANTHER PTHR11803:SF2 16 160 9.0E-26 T 13-09-2016 PMA3_RS24470 8fd1075a056706aaa66b4c7ab816a696 164 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 20 158 3.3E-23 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS08220 04a716395766cecf4db5ed0b3909b340 471 PANTHER PTHR32305 1 433 3.4E-44 T 13-09-2016 PMA3_RS08220 04a716395766cecf4db5ed0b3909b340 471 SUPERFAMILY SSF69279 192 350 3.74E-18 T 13-09-2016 PMA3_RS08220 04a716395766cecf4db5ed0b3909b340 471 SUPERFAMILY SSF69279 16 183 5.38E-44 T 13-09-2016 PMA3_RS08220 04a716395766cecf4db5ed0b3909b340 471 Gene3D G3DSA:2.40.50.230 357 434 7.6E-10 T 13-09-2016 IPR006531 Gp5 N-terminal PMA3_RS08220 04a716395766cecf4db5ed0b3909b340 471 PANTHER PTHR32305:SF11 1 433 3.4E-44 T 13-09-2016 PMA3_RS08220 04a716395766cecf4db5ed0b3909b340 471 SUPERFAMILY SSF69255 350 434 6.02E-13 T 13-09-2016 PMA3_RS08220 04a716395766cecf4db5ed0b3909b340 471 Pfam PF05954 Phage late control gene D protein (GPD) 28 315 3.8E-52 T 13-09-2016 PMA3_RS08220 04a716395766cecf4db5ed0b3909b340 471 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 15 435 1.8E-78 T 13-09-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PMA3_RS08220 04a716395766cecf4db5ed0b3909b340 471 Gene3D G3DSA:3.55.50.10 93 188 1.9E-27 T 13-09-2016 PMA3_RS18035 dce65f9a4e380d1d8e466ff2072d0a89 257 Gene3D G3DSA:3.40.50.300 3 255 1.9E-52 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18035 dce65f9a4e380d1d8e466ff2072d0a89 257 PANTHER PTHR13696 4 255 4.4E-89 T 13-09-2016 PMA3_RS18035 dce65f9a4e380d1d8e466ff2072d0a89 257 Pfam PF13614 AAA domain 5 183 2.9E-37 T 13-09-2016 IPR025669 AAA domain PMA3_RS18035 dce65f9a4e380d1d8e466ff2072d0a89 257 SUPERFAMILY SSF52540 1 255 7.48E-50 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18035 dce65f9a4e380d1d8e466ff2072d0a89 257 PANTHER PTHR13696:SF66 4 255 4.4E-89 T 13-09-2016 PMA3_RS13480 728c503a187c86e4b7cecf0639864b71 417 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 287 4.5E-16 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS13480 728c503a187c86e4b7cecf0639864b71 417 Gene3D G3DSA:2.40.50.100 62 96 8.0E-25 T 13-09-2016 PMA3_RS13480 728c503a187c86e4b7cecf0639864b71 417 Gene3D G3DSA:2.40.50.100 171 204 8.0E-25 T 13-09-2016 PMA3_RS13480 728c503a187c86e4b7cecf0639864b71 417 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 368 1.4E-78 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS13480 728c503a187c86e4b7cecf0639864b71 417 SUPERFAMILY SSF111369 52 291 1.07E-68 T 13-09-2016 PMA3_RS13480 728c503a187c86e4b7cecf0639864b71 417 PANTHER PTHR30158 6 392 2.1E-181 T 13-09-2016 PMA3_RS13480 728c503a187c86e4b7cecf0639864b71 417 PANTHER PTHR30158:SF2 6 392 2.1E-181 T 13-09-2016 PMA3_RS08650 0004d697bc6aae9935b8c982fccd4144 336 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 13-09-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 PMA3_RS08650 0004d697bc6aae9935b8c982fccd4144 336 PANTHER PTHR30480 9 318 3.1E-120 T 13-09-2016 PMA3_RS08650 0004d697bc6aae9935b8c982fccd4144 336 SUPERFAMILY SSF51445 7 286 8.63E-84 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS08650 0004d697bc6aae9935b8c982fccd4144 336 Gene3D G3DSA:3.20.20.300 9 288 1.1E-91 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS08650 0004d697bc6aae9935b8c982fccd4144 336 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 8 334 48.877 T 13-09-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 PMA3_RS08650 0004d697bc6aae9935b8c982fccd4144 336 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 291 6.4E-79 T 13-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PMA3_RS08650 0004d697bc6aae9935b8c982fccd4144 336 PANTHER PTHR30480:SF7 9 318 3.1E-120 T 13-09-2016 PMA3_RS00600 6c55beb9a574c2ce502521676e7b4545 121 Gene3D G3DSA:3.40.50.2300 1 119 1.4E-37 T 13-09-2016 PMA3_RS00600 6c55beb9a574c2ce502521676e7b4545 121 SUPERFAMILY SSF52172 1 119 1.07E-35 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS00600 6c55beb9a574c2ce502521676e7b4545 121 PANTHER PTHR26402 1 119 3.2E-44 T 13-09-2016 PMA3_RS00600 6c55beb9a574c2ce502521676e7b4545 121 Pfam PF00072 Response regulator receiver domain 3 112 1.1E-24 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS00600 6c55beb9a574c2ce502521676e7b4545 121 SMART SM00448 1 111 1.9E-35 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS00600 6c55beb9a574c2ce502521676e7b4545 121 PANTHER PTHR26402:SF578 1 119 3.2E-44 T 13-09-2016 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 Gene3D G3DSA:3.90.190.20 313 449 1.9E-31 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 Pfam PF08245 Mur ligase middle domain 108 291 6.9E-22 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 60.39 T 13-09-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 SUPERFAMILY SSF51984 1 90 7.72E-24 T 13-09-2016 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 PANTHER PTHR23135:SF17 1 439 1.0E-268 T 13-09-2016 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 PANTHER PTHR23135 1 439 1.0E-268 T 13-09-2016 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 Pfam PF01225 Mur ligase family, catalytic domain 2 100 2.6E-19 T 13-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 359 1.7E-9 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 SUPERFAMILY SSF53623 94 309 1.83E-51 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 Gene3D G3DSA:3.40.50.720 1 90 7.8E-41 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 Gene3D G3DSA:3.40.1190.10 92 312 2.6E-86 T 13-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 SUPERFAMILY SSF53244 311 448 1.23E-35 T 13-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PMA3_RS26685 3be7d2f28c9545ae817822685d83a76b 449 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.3E-217 T 13-09-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 PMA3_RS25440 31c937cd144dedf7264d821ad17db202 676 SMART SM00304 347 399 4.1E-7 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS25440 31c937cd144dedf7264d821ad17db202 676 SMART SM00283 414 675 2.8E-72 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS25440 31c937cd144dedf7264d821ad17db202 676 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 482 674 7.6E-48 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS25440 31c937cd144dedf7264d821ad17db202 676 Gene3D G3DSA:1.10.287.950 429 644 6.4E-55 T 13-09-2016 PMA3_RS25440 31c937cd144dedf7264d821ad17db202 676 SUPERFAMILY SSF58104 367 676 6.67E-74 T 13-09-2016 PMA3_RS25440 31c937cd144dedf7264d821ad17db202 676 PANTHER PTHR32089:SF34 312 676 2.7E-127 T 13-09-2016 PMA3_RS25440 31c937cd144dedf7264d821ad17db202 676 Pfam PF00672 HAMP domain 330 395 7.5E-8 T 13-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PMA3_RS25440 31c937cd144dedf7264d821ad17db202 676 PANTHER PTHR32089 312 676 2.7E-127 T 13-09-2016 PMA3_RS04755 6255485fadee5e43e647cc8e4f493974 69 Gene3D G3DSA:2.40.50.140 5 67 2.9E-28 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS04755 6255485fadee5e43e647cc8e4f493974 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 13-09-2016 IPR019844 Cold-shock conserved site PMA3_RS04755 6255485fadee5e43e647cc8e4f493974 69 PRINTS PR00050 Cold shock protein signature 42 60 9.7E-17 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS04755 6255485fadee5e43e647cc8e4f493974 69 PRINTS PR00050 Cold shock protein signature 7 22 9.7E-17 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS04755 6255485fadee5e43e647cc8e4f493974 69 PRINTS PR00050 Cold shock protein signature 27 36 9.7E-17 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS04755 6255485fadee5e43e647cc8e4f493974 69 PIRSF PIRSF002599 1 69 7.3E-23 T 13-09-2016 IPR012156 Cold shock, CspA GO:0003676 PMA3_RS04755 6255485fadee5e43e647cc8e4f493974 69 SUPERFAMILY SSF50249 2 67 5.88E-23 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS04755 6255485fadee5e43e647cc8e4f493974 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 2.6E-27 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS04755 6255485fadee5e43e647cc8e4f493974 69 SMART SM00357 6 69 8.1E-24 T 13-09-2016 IPR011129 Cold shock protein GO:0003676 PMA3_RS04755 6255485fadee5e43e647cc8e4f493974 69 PANTHER PTHR11544 1 69 3.0E-31 T 13-09-2016 PMA3_RS27995 6361f9f15edd4347235bfed0b6302a03 188 SUPERFAMILY SSF55729 2 169 2.4E-25 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS27995 6361f9f15edd4347235bfed0b6302a03 188 PANTHER PTHR23091 103 167 1.1E-13 T 13-09-2016 PMA3_RS27995 6361f9f15edd4347235bfed0b6302a03 188 PANTHER PTHR23091 48 81 1.1E-13 T 13-09-2016 PMA3_RS27995 6361f9f15edd4347235bfed0b6302a03 188 PANTHER PTHR23091 1 29 1.1E-13 T 13-09-2016 PMA3_RS27995 6361f9f15edd4347235bfed0b6302a03 188 Gene3D G3DSA:3.40.630.30 3 176 9.0E-25 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS27995 6361f9f15edd4347235bfed0b6302a03 188 Pfam PF00583 Acetyltransferase (GNAT) family 67 163 9.8E-13 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS03575 8f79c9f7e4d18152835fd9bd87db6606 140 Pfam PF13511 Domain of unknown function (DUF4124) 11 63 1.5E-15 T 13-09-2016 IPR025392 Domain of unknown function DUF4124 PMA3_RS17305 4ec63decdabd73c938aaf209fafb71c1 461 SMART SM01236 138 235 2.3E-24 T 13-09-2016 PMA3_RS17305 4ec63decdabd73c938aaf209fafb71c1 461 Pfam PF14518 Iron-containing redox enzyme 108 271 3.1E-33 T 13-09-2016 IPR028201 PqqC-like protein PMA3_RS15525 408c0a47bdd094729d2d71543bc48173 173 Pfam PF16103 Domain of unknown function (DUF4822) 38 159 2.2E-15 T 13-09-2016 IPR032247 Domain of unknown function DUF4822 PMA3_RS11135 37e8a9dd248ee26af033a7734c01b911 455 PANTHER PTHR23023 1 401 1.9E-108 T 13-09-2016 PMA3_RS11135 37e8a9dd248ee26af033a7734c01b911 455 SUPERFAMILY SSF51905 1 242 1.12E-46 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11135 37e8a9dd248ee26af033a7734c01b911 455 SUPERFAMILY SSF51905 256 387 1.55E-9 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11135 37e8a9dd248ee26af033a7734c01b911 455 Pfam PF00743 Flavin-binding monooxygenase-like 3 226 3.8E-29 T 13-09-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 PMA3_RS11135 37e8a9dd248ee26af033a7734c01b911 455 Pfam PF00743 Flavin-binding monooxygenase-like 244 382 2.8E-12 T 13-09-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 PMA3_RS11135 37e8a9dd248ee26af033a7734c01b911 455 PANTHER PTHR23023:SF124 1 401 1.9E-108 T 13-09-2016 PMA3_RS11135 37e8a9dd248ee26af033a7734c01b911 455 Gene3D G3DSA:3.50.50.60 272 420 7.8E-53 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11135 37e8a9dd248ee26af033a7734c01b911 455 Gene3D G3DSA:3.50.50.60 2 168 7.8E-53 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS11135 37e8a9dd248ee26af033a7734c01b911 455 Gene3D G3DSA:3.50.50.60 169 271 9.5E-19 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS22070 ed95bccea959a9de58c35c6f48f71bea 278 Pfam PF13509 S1 domain 4 66 2.2E-23 T 13-09-2016 PMA3_RS22070 ed95bccea959a9de58c35c6f48f71bea 278 Pfam PF13509 S1 domain 72 130 7.6E-9 T 13-09-2016 PMA3_RS22070 ed95bccea959a9de58c35c6f48f71bea 278 SMART SM00316 146 208 0.0025 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS22070 ed95bccea959a9de58c35c6f48f71bea 278 SMART SM00316 71 133 10.0 T 13-09-2016 IPR022967 RNA-binding domain, S1 PMA3_RS22070 ed95bccea959a9de58c35c6f48f71bea 278 PANTHER PTHR37296 1 277 5.8E-104 T 13-09-2016 PMA3_RS22070 ed95bccea959a9de58c35c6f48f71bea 278 PIRSF PIRSF012524 1 278 2.9E-92 T 13-09-2016 IPR014464 Conserved virulence factor B PMA3_RS15195 68f712a5ab9ab7ff9b7729e384d6e9d2 544 PANTHER PTHR40940:SF1 1 532 4.0E-92 T 13-09-2016 PMA3_RS15195 68f712a5ab9ab7ff9b7729e384d6e9d2 544 Pfam PF13584 Oxygen tolerance 16 462 3.2E-104 T 13-09-2016 IPR025738 Aerotolerance-related protein BatD PMA3_RS15195 68f712a5ab9ab7ff9b7729e384d6e9d2 544 PANTHER PTHR40940 1 532 4.0E-92 T 13-09-2016 PMA3_RS09265 2ac48ffe4bd0fc5ac263faca46c1989d 151 Pfam PF09980 Predicted membrane protein (DUF2214) 4 148 1.2E-42 T 13-09-2016 IPR018706 Protein of unknown function DUF2214, membrane PMA3_RS01110 bebec420f22fe6428e1ae59e40619b11 472 Gene3D G3DSA:2.40.10.10 50 162 1.3E-9 T 13-09-2016 PMA3_RS01110 bebec420f22fe6428e1ae59e40619b11 472 SUPERFAMILY SSF50494 8 240 1.56E-15 T 13-09-2016 IPR009003 Peptidase S1, PA clan PMA3_RS01110 bebec420f22fe6428e1ae59e40619b11 472 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 84 89 - T 13-09-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 PMA3_RS01110 bebec420f22fe6428e1ae59e40619b11 472 Pfam PF13365 Trypsin-like peptidase domain 63 228 6.3E-10 T 13-09-2016 PMA3_RS01110 bebec420f22fe6428e1ae59e40619b11 472 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 132 146 1.2E-5 T 13-09-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PMA3_RS01110 bebec420f22fe6428e1ae59e40619b11 472 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 213 225 1.2E-5 T 13-09-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PMA3_RS01110 bebec420f22fe6428e1ae59e40619b11 472 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 74 89 1.2E-5 T 13-09-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PMA3_RS03390 ff79daca3f6f238b0928cf704cb22733 66 PANTHER PTHR36150 2 65 8.6E-23 T 13-09-2016 PMA3_RS03390 ff79daca3f6f238b0928cf704cb22733 66 SUPERFAMILY SSF57716 2 61 2.28E-22 T 13-09-2016 PMA3_RS03390 ff79daca3f6f238b0928cf704cb22733 66 PANTHER PTHR36150:SF1 2 65 8.6E-23 T 13-09-2016 PMA3_RS03390 ff79daca3f6f238b0928cf704cb22733 66 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 58 19.803 T 13-09-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 PMA3_RS03390 ff79daca3f6f238b0928cf704cb22733 66 Gene3D G3DSA:3.30.50.10 1 60 3.1E-26 T 13-09-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 PMA3_RS03390 ff79daca3f6f238b0928cf704cb22733 66 Pfam PF03884 Domain of unknown function (DUF329) 7 56 3.5E-26 T 13-09-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 PMA3_RS03370 ea71e249fa3a479961964c246100123b 80 Pfam PF10976 Protein of unknown function (DUF2790) 14 76 1.7E-21 T 13-09-2016 IPR021245 Protein of unknown function DUF2790 PMA3_RS10280 4f8d0d6601d36b4fda1e68374959ef0a 282 PANTHER PTHR30177 9 272 6.1E-80 T 13-09-2016 PMA3_RS10280 4f8d0d6601d36b4fda1e68374959ef0a 282 PANTHER PTHR30177:SF2 9 272 6.1E-80 T 13-09-2016 PMA3_RS10280 4f8d0d6601d36b4fda1e68374959ef0a 282 Gene3D G3DSA:1.10.3720.10 86 270 2.7E-29 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS10280 4f8d0d6601d36b4fda1e68374959ef0a 282 SUPERFAMILY SSF161098 87 270 7.59E-34 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS10280 4f8d0d6601d36b4fda1e68374959ef0a 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 267 5.3E-19 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS07730 18c939aec0fcb9bb7e95b4829a34aa40 263 PANTHER PTHR11941:SF82 8 260 5.1E-140 T 13-09-2016 PMA3_RS07730 18c939aec0fcb9bb7e95b4829a34aa40 263 PANTHER PTHR11941 8 260 5.1E-140 T 13-09-2016 PMA3_RS07730 18c939aec0fcb9bb7e95b4829a34aa40 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 261 1.6E-39 T 13-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PMA3_RS07730 18c939aec0fcb9bb7e95b4829a34aa40 263 Gene3D G3DSA:3.90.226.10 7 257 4.7E-59 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS07730 18c939aec0fcb9bb7e95b4829a34aa40 263 SUPERFAMILY SSF52096 7 262 2.99E-59 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS23200 570f4bb1739005d1b069fb3864424e4b 162 PANTHER PTHR36115 8 161 4.9E-54 T 13-09-2016 PMA3_RS23200 570f4bb1739005d1b069fb3864424e4b 162 Pfam PF06271 RDD family 15 150 1.4E-28 T 13-09-2016 IPR010432 RDD PMA3_RS23200 570f4bb1739005d1b069fb3864424e4b 162 PANTHER PTHR36115:SF2 8 161 4.9E-54 T 13-09-2016 PMA3_RS30070 fc36b1bba6bc055db615c5cc99bb65b6 239 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 72 217 6.6E-7 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS30070 fc36b1bba6bc055db615c5cc99bb65b6 239 SUPERFAMILY SSF55846 48 230 1.87E-29 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS30070 fc36b1bba6bc055db615c5cc99bb65b6 239 Gene3D G3DSA:3.40.80.10 48 230 2.9E-35 T 13-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PMA3_RS30070 fc36b1bba6bc055db615c5cc99bb65b6 239 SMART SM00701 47 173 4.6E-5 T 13-09-2016 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 PMA3_RS14985 4a87c043582e38c0e50e1bce69380aa6 77 SUPERFAMILY SSF141447 1 72 9.68E-28 T 13-09-2016 PMA3_RS14985 4a87c043582e38c0e50e1bce69380aa6 77 Pfam PF11462 Protein of unknown function (DUF3203) 1 72 3.7E-29 T 13-09-2016 IPR021564 Protein of unknown function DUF3203 PMA3_RS24910 89a50282947b49dc5a4c28f1f7e5a107 112 Gene3D G3DSA:3.20.160.10 8 111 7.4E-44 T 13-09-2016 PMA3_RS24910 89a50282947b49dc5a4c28f1f7e5a107 112 Pfam PF08888 HopJ type III effector protein 7 109 6.6E-37 T 13-09-2016 IPR014984 HopJ type III effector protein PMA3_RS19980 b09b19a24f4e9ac62866a27c22f126f4 423 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 15 403 6.1E-23 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS19980 b09b19a24f4e9ac62866a27c22f126f4 423 PANTHER PTHR30569 1 407 3.2E-58 T 13-09-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 PMA3_RS30190 212d431a95f42212896ea0f211ecca35 185 Pfam PF01300 Telomere recombination 13 181 2.8E-41 T 13-09-2016 IPR006070 YrdC-like domain GO:0003725 PMA3_RS30190 212d431a95f42212896ea0f211ecca35 185 Gene3D G3DSA:3.90.870.10 3 184 3.8E-53 T 13-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PMA3_RS30190 212d431a95f42212896ea0f211ecca35 185 PANTHER PTHR17490 6 180 7.3E-83 T 13-09-2016 PMA3_RS30190 212d431a95f42212896ea0f211ecca35 185 SUPERFAMILY SSF55821 3 183 9.77E-52 T 13-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PMA3_RS30190 212d431a95f42212896ea0f211ecca35 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 183 36.169 T 13-09-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 PMA3_RS30190 212d431a95f42212896ea0f211ecca35 185 PANTHER PTHR17490:SF8 6 180 7.3E-83 T 13-09-2016 PMA3_RS04320 fe34513dbea9cdb4f55fd60abe0f3203 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 326 5.3E-90 T 13-09-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 PMA3_RS04320 fe34513dbea9cdb4f55fd60abe0f3203 334 PANTHER PTHR38772 1 333 5.1E-163 T 13-09-2016 PMA3_RS04320 fe34513dbea9cdb4f55fd60abe0f3203 334 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 1 333 41.132 T 13-09-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 PMA3_RS16320 ec0c1ca862329dbd971a5441f1cb1cee 105 SUPERFAMILY SSF46626 25 104 4.11E-20 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16320 ec0c1ca862329dbd971a5441f1cb1cee 105 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 22 101 1.6E-8 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16320 ec0c1ca862329dbd971a5441f1cb1cee 105 PRINTS PR00606 Class ID cytochrome C signature 29 42 4.5E-26 T 13-09-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PMA3_RS16320 ec0c1ca862329dbd971a5441f1cb1cee 105 PRINTS PR00606 Class ID cytochrome C signature 44 57 4.5E-26 T 13-09-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PMA3_RS16320 ec0c1ca862329dbd971a5441f1cb1cee 105 PRINTS PR00606 Class ID cytochrome C signature 82 92 4.5E-26 T 13-09-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PMA3_RS16320 ec0c1ca862329dbd971a5441f1cb1cee 105 PRINTS PR00606 Class ID cytochrome C signature 67 80 4.5E-26 T 13-09-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PMA3_RS16320 ec0c1ca862329dbd971a5441f1cb1cee 105 PRINTS PR00606 Class ID cytochrome C signature 93 103 4.5E-26 T 13-09-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PMA3_RS16320 ec0c1ca862329dbd971a5441f1cb1cee 105 Gene3D G3DSA:1.10.760.10 25 105 1.1E-29 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS22610 da34888407b29b6aa6b69079282ee2a9 367 PANTHER PTHR11941 264 337 1.0E-102 T 13-09-2016 PMA3_RS22610 da34888407b29b6aa6b69079282ee2a9 367 PANTHER PTHR11941 8 193 1.0E-102 T 13-09-2016 PMA3_RS22610 da34888407b29b6aa6b69079282ee2a9 367 Gene3D G3DSA:3.90.226.10 269 338 2.1E-49 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS22610 da34888407b29b6aa6b69079282ee2a9 367 Gene3D G3DSA:3.90.226.10 6 204 2.1E-49 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS22610 da34888407b29b6aa6b69079282ee2a9 367 PANTHER PTHR11941:SF53 264 337 1.0E-102 T 13-09-2016 PMA3_RS22610 da34888407b29b6aa6b69079282ee2a9 367 PANTHER PTHR11941:SF53 8 193 1.0E-102 T 13-09-2016 PMA3_RS22610 da34888407b29b6aa6b69079282ee2a9 367 Pfam PF16113 Enoyl-CoA hydratase/isomerase 16 354 4.6E-113 T 13-09-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 PMA3_RS22610 da34888407b29b6aa6b69079282ee2a9 367 SUPERFAMILY SSF52096 264 340 9.07E-58 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS22610 da34888407b29b6aa6b69079282ee2a9 367 SUPERFAMILY SSF52096 12 193 9.07E-58 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS12725 8c45278bcd2837d3ce93ba6063023894 231 PANTHER PTHR20842:SF1 3 216 7.2E-33 T 13-09-2016 PMA3_RS12725 8c45278bcd2837d3ce93ba6063023894 231 PANTHER PTHR20842 3 216 7.2E-33 T 13-09-2016 PMA3_RS12725 8c45278bcd2837d3ce93ba6063023894 231 Pfam PF03575 Peptidase family S51 11 207 6.7E-40 T 13-09-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 PMA3_RS12725 8c45278bcd2837d3ce93ba6063023894 231 SUPERFAMILY SSF52317 10 207 1.67E-22 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS12725 8c45278bcd2837d3ce93ba6063023894 231 Gene3D G3DSA:3.40.50.880 11 208 2.8E-43 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS08870 bbedbadbfeb1ca9c6e22af375bdcc848 517 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 349 369 - T 13-09-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS08870 bbedbadbfeb1ca9c6e22af375bdcc848 517 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 21 431 4.5E-102 T 13-09-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS08870 bbedbadbfeb1ca9c6e22af375bdcc848 517 PANTHER PTHR11119 13 434 1.7E-107 T 13-09-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS08870 bbedbadbfeb1ca9c6e22af375bdcc848 517 TIGRFAM TIGR03173 pbuX: xanthine permease 24 434 5.9E-154 T 13-09-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 PMA3_RS08870 bbedbadbfeb1ca9c6e22af375bdcc848 517 Pfam PF00860 Permease family 22 401 1.3E-90 T 13-09-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PMA3_RS01810 9ee4f637636acac9851579c424444965 483 SUPERFAMILY SSF56112 46 171 1.22E-13 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS01810 9ee4f637636acac9851579c424444965 483 SUPERFAMILY SSF56112 290 468 3.88E-12 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS01810 9ee4f637636acac9851579c424444965 483 Gene3D G3DSA:1.10.510.10 403 442 2.8E-5 T 13-09-2016 PMA3_RS01810 9ee4f637636acac9851579c424444965 483 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 311 436 3.9E-9 T 13-09-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PMA3_RS22085 eed2f363d7f2c86783f7eb7aee9cbcab 289 PIRSF PIRSF028200 4 286 3.8E-92 T 13-09-2016 IPR016875 Uncharacterised conserved protein UCP028200 PMA3_RS20745 6272f508273957183b134d4298017f53 63 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 56 3.9E-12 T 13-09-2016 IPR027379 Cardiolipin synthase N-terminal PMA3_RS07665 651ce314d13615d7bcc37ebb48879676 166 PANTHER PTHR31964 1 165 1.1E-24 T 13-09-2016 PMA3_RS07665 651ce314d13615d7bcc37ebb48879676 166 PANTHER PTHR31964:SF42 1 165 1.1E-24 T 13-09-2016 PMA3_RS07665 651ce314d13615d7bcc37ebb48879676 166 Pfam PF00582 Universal stress protein family 1 157 1.8E-21 T 13-09-2016 IPR006016 UspA GO:0006950 PMA3_RS07665 651ce314d13615d7bcc37ebb48879676 166 PRINTS PR01438 Universal stress protein signature 117 129 6.7E-5 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS07665 651ce314d13615d7bcc37ebb48879676 166 PRINTS PR01438 Universal stress protein signature 135 157 6.7E-5 T 13-09-2016 IPR006015 Universal stress protein A PMA3_RS07665 651ce314d13615d7bcc37ebb48879676 166 Gene3D G3DSA:3.40.50.620 1 158 7.9E-27 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS07665 651ce314d13615d7bcc37ebb48879676 166 SUPERFAMILY SSF52402 1 157 1.0E-24 T 13-09-2016 PMA3_RS13170 2e3bbd42e4b0787eeece4bcf7a28edc1 372 PANTHER PTHR12169:SF11 314 365 8.9E-133 T 13-09-2016 PMA3_RS13170 2e3bbd42e4b0787eeece4bcf7a28edc1 372 PANTHER PTHR12169:SF11 1 284 8.9E-133 T 13-09-2016 PMA3_RS13170 2e3bbd42e4b0787eeece4bcf7a28edc1 372 PANTHER PTHR12169 1 284 8.9E-133 T 13-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 PMA3_RS13170 2e3bbd42e4b0787eeece4bcf7a28edc1 372 Gene3D G3DSA:3.40.50.300 17 164 2.6E-24 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13170 2e3bbd42e4b0787eeece4bcf7a28edc1 372 SUPERFAMILY SSF52540 25 168 5.16E-17 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13170 2e3bbd42e4b0787eeece4bcf7a28edc1 372 PANTHER PTHR12169 314 365 8.9E-133 T 13-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 PMA3_RS13170 2e3bbd42e4b0787eeece4bcf7a28edc1 372 Pfam PF03969 AFG1-like ATPase 307 369 5.1E-15 T 13-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 PMA3_RS13170 2e3bbd42e4b0787eeece4bcf7a28edc1 372 Pfam PF03969 AFG1-like ATPase 24 284 1.3E-78 T 13-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 PMA3_RS07505 80e0b3e8efca24d70b9527d870d3f9a6 72 PANTHER PTHR41532 2 69 2.3E-19 T 13-09-2016 PMA3_RS07505 80e0b3e8efca24d70b9527d870d3f9a6 72 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 4 45 6.2E-21 T 13-09-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type PMA3_RS07505 80e0b3e8efca24d70b9527d870d3f9a6 72 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 2.7E-15 T 13-09-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type PMA3_RS13765 4a502a2e996f6a966c0866a66ed9a98c 454 SUPERFAMILY SSF56954 30 450 4.19E-81 T 13-09-2016 PMA3_RS13765 4a502a2e996f6a966c0866a66ed9a98c 454 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 30 447 8.4E-117 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS13765 4a502a2e996f6a966c0866a66ed9a98c 454 PANTHER PTHR30026 8 449 7.1E-107 T 13-09-2016 PMA3_RS13765 4a502a2e996f6a966c0866a66ed9a98c 454 PANTHER PTHR30026:SF3 8 449 7.1E-107 T 13-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PMA3_RS13765 4a502a2e996f6a966c0866a66ed9a98c 454 Pfam PF02321 Outer membrane efflux protein 31 221 1.1E-22 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS13765 4a502a2e996f6a966c0866a66ed9a98c 454 Pfam PF02321 Outer membrane efflux protein 247 433 6.4E-26 T 13-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PMA3_RS13765 4a502a2e996f6a966c0866a66ed9a98c 454 Gene3D G3DSA:1.20.1600.10 31 440 2.3E-65 T 13-09-2016 PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 186 7.5E-35 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 180 5.0E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 Gene3D G3DSA:3.40.50.1000 3 18 7.3E-48 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 Gene3D G3DSA:3.40.50.1000 91 216 7.3E-48 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 SUPERFAMILY SSF56784 4 215 6.64E-54 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 PANTHER PTHR18901 4 215 1.6E-57 T 13-09-2016 PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 2.1E-12 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 2.1E-12 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 2.1E-12 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.1E-12 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS16795 ad9744e0a7f35199fc33f7e969868562 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 186 1.9E-20 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS03910 02d11d47fad4da3109c5dc2cbc8799ce 272 PANTHER PTHR22726 1 272 1.0E-67 T 13-09-2016 PMA3_RS03910 02d11d47fad4da3109c5dc2cbc8799ce 272 Gene3D G3DSA:3.30.2010.10 70 158 1.3E-14 T 13-09-2016 PMA3_RS03910 02d11d47fad4da3109c5dc2cbc8799ce 272 Pfam PF01435 Peptidase family M48 74 257 2.2E-33 T 13-09-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PMA3_RS16645 eb4b9298112e3473c29aa533915b4d0d 587 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 5 575 6.1E-154 T 13-09-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PMA3_RS16645 eb4b9298112e3473c29aa533915b4d0d 587 PANTHER PTHR30003 1 344 2.5E-232 T 13-09-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PMA3_RS16645 eb4b9298112e3473c29aa533915b4d0d 587 PANTHER PTHR30003:SF0 365 585 2.5E-232 T 13-09-2016 PMA3_RS16645 eb4b9298112e3473c29aa533915b4d0d 587 PANTHER PTHR30003:SF0 1 344 2.5E-232 T 13-09-2016 PMA3_RS16645 eb4b9298112e3473c29aa533915b4d0d 587 Pfam PF02652 L-lactate permease 16 572 3.8E-152 T 13-09-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PMA3_RS16645 eb4b9298112e3473c29aa533915b4d0d 587 PANTHER PTHR30003 365 585 2.5E-232 T 13-09-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PMA3_RS22390 114bf25cdb4a49d8ce222615951fbbf7 256 Pfam PF08241 Methyltransferase domain 48 135 2.3E-15 T 13-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PMA3_RS22390 114bf25cdb4a49d8ce222615951fbbf7 256 SUPERFAMILY SSF53335 15 202 3.44E-31 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS22390 114bf25cdb4a49d8ce222615951fbbf7 256 PANTHER PTHR10108:SF711 17 158 7.3E-29 T 13-09-2016 PMA3_RS22390 114bf25cdb4a49d8ce222615951fbbf7 256 PANTHER PTHR10108 17 158 7.3E-29 T 13-09-2016 PMA3_RS22390 114bf25cdb4a49d8ce222615951fbbf7 256 Gene3D G3DSA:3.40.50.150 12 169 1.3E-29 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS19620 02979accdbfb65c5533bde86aa68c4ed 741 Gene3D G3DSA:3.40.718.10 339 362 4.9E-39 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS19620 02979accdbfb65c5533bde86aa68c4ed 741 Gene3D G3DSA:3.40.718.10 146 284 4.9E-39 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS19620 02979accdbfb65c5533bde86aa68c4ed 741 Gene3D G3DSA:3.40.718.10 538 645 4.9E-39 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS19620 02979accdbfb65c5533bde86aa68c4ed 741 SUPERFAMILY SSF53659 4 740 0.0 T 13-09-2016 PMA3_RS19620 02979accdbfb65c5533bde86aa68c4ed 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 737 0.0 T 13-09-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PMA3_RS19620 02979accdbfb65c5533bde86aa68c4ed 741 PIRSF PIRSF009407 1 741 0.0 T 13-09-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PMA3_RS19620 02979accdbfb65c5533bde86aa68c4ed 741 PANTHER PTHR36999 1 741 0.0 T 13-09-2016 PMA3_RS19620 02979accdbfb65c5533bde86aa68c4ed 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 4 740 0.0 T 13-09-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PMA3_RS01160 7c86c458785600c591222046a8097634 622 Gene3D G3DSA:3.80.10.10 208 460 5.2E-37 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS01160 7c86c458785600c591222046a8097634 622 PANTHER PTHR23155 208 461 2.1E-21 T 13-09-2016 PMA3_RS01160 7c86c458785600c591222046a8097634 622 SMART SM00369 369 392 10.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS01160 7c86c458785600c591222046a8097634 622 SMART SM00369 272 295 210.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS01160 7c86c458785600c591222046a8097634 622 SMART SM00369 417 440 7.6 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS01160 7c86c458785600c591222046a8097634 622 SMART SM00369 298 319 360.0 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS01160 7c86c458785600c591222046a8097634 622 SMART SM00369 320 343 0.046 T 13-09-2016 IPR003591 Leucine-rich repeat, typical subtype PMA3_RS01160 7c86c458785600c591222046a8097634 622 SUPERFAMILY SSF52058 208 484 2.04E-36 T 13-09-2016 IPR032675 Leucine-rich repeat domain, L domain-like PMA3_RS26295 42bc951ab6e6c06752fe93a5207254a7 324 Pfam PF08447 PAS fold 144 233 1.1E-18 T 13-09-2016 IPR013655 PAS fold-3 GO:0005515 PMA3_RS26295 42bc951ab6e6c06752fe93a5207254a7 324 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 296 324 1.8E-19 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS26295 42bc951ab6e6c06752fe93a5207254a7 324 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 267 294 1.8E-19 T 13-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PMA3_RS26295 42bc951ab6e6c06752fe93a5207254a7 324 Gene3D G3DSA:3.30.450.20 145 240 7.2E-18 T 13-09-2016 PMA3_RS26295 42bc951ab6e6c06752fe93a5207254a7 324 SUPERFAMILY SSF58104 229 322 1.83E-37 T 13-09-2016 PMA3_RS26295 42bc951ab6e6c06752fe93a5207254a7 324 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 233 321 4.6E-30 T 13-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PMA3_RS26295 42bc951ab6e6c06752fe93a5207254a7 324 SUPERFAMILY SSF55785 145 243 8.2E-17 T 13-09-2016 IPR000014 PAS domain PMA3_RS26295 42bc951ab6e6c06752fe93a5207254a7 324 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 246 6.7E-8 T 13-09-2016 IPR000014 PAS domain PMA3_RS26295 42bc951ab6e6c06752fe93a5207254a7 324 PANTHER PTHR32089 226 323 3.2E-32 T 13-09-2016 PMA3_RS26295 42bc951ab6e6c06752fe93a5207254a7 324 Gene3D G3DSA:1.10.287.950 241 323 6.9E-33 T 13-09-2016 PMA3_RS09845 5ed7e71292839f4db859694a118aaca0 323 PANTHER PTHR30388:SF4 5 319 2.4E-71 T 13-09-2016 PMA3_RS09845 5ed7e71292839f4db859694a118aaca0 323 PANTHER PTHR30388 5 319 2.4E-71 T 13-09-2016 PMA3_RS09845 5ed7e71292839f4db859694a118aaca0 323 Pfam PF02625 XdhC and CoxI family 15 82 4.2E-13 T 13-09-2016 IPR003777 XdhC- CoxI PMA3_RS09845 5ed7e71292839f4db859694a118aaca0 323 Pfam PF13478 XdhC Rossmann domain 170 311 8.6E-34 T 13-09-2016 IPR027051 XdhC Rossmann domain PMA3_RS21735 7f17ba6f42cbf0bcf6d839255d087cb5 109 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 35 108 1.3E-24 T 13-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PMA3_RS21735 7f17ba6f42cbf0bcf6d839255d087cb5 109 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 109 18.194 T 13-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PMA3_RS21735 7f17ba6f42cbf0bcf6d839255d087cb5 109 PANTHER PTHR34653 16 109 1.9E-26 T 13-09-2016 PMA3_RS21735 7f17ba6f42cbf0bcf6d839255d087cb5 109 Pfam PF02049 Flagellar hook-basal body complex protein FliE 26 109 1.6E-31 T 13-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PMA3_RS21735 7f17ba6f42cbf0bcf6d839255d087cb5 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 94 107 2.1E-17 T 13-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PMA3_RS21735 7f17ba6f42cbf0bcf6d839255d087cb5 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 73 89 2.1E-17 T 13-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PMA3_RS21735 7f17ba6f42cbf0bcf6d839255d087cb5 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 38 54 2.1E-17 T 13-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PMA3_RS07210 19fb25785c871592ecbef921045f89b5 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 93 26.095 T 13-09-2016 IPR009664 Protein of unknown function DUF1255 PMA3_RS07210 19fb25785c871592ecbef921045f89b5 94 PANTHER PTHR36540:SF1 1 94 4.9E-50 T 13-09-2016 PMA3_RS07210 19fb25785c871592ecbef921045f89b5 94 PANTHER PTHR36540 1 94 4.9E-50 T 13-09-2016 PMA3_RS07210 19fb25785c871592ecbef921045f89b5 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 1.5E-37 T 13-09-2016 IPR009664 Protein of unknown function DUF1255 PMA3_RS07210 19fb25785c871592ecbef921045f89b5 94 Gene3D G3DSA:2.60.120.10 1 92 3.3E-40 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS07210 19fb25785c871592ecbef921045f89b5 94 SUPERFAMILY SSF51182 1 92 8.41E-37 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS24485 efbc6a8c89c107ca496a66a213c40478 469 SUPERFAMILY SSF46785 12 87 3.69E-20 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24485 efbc6a8c89c107ca496a66a213c40478 469 Pfam PF00155 Aminotransferase class I and II 144 460 1.1E-27 T 13-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PMA3_RS24485 efbc6a8c89c107ca496a66a213c40478 469 PANTHER PTHR11751 95 468 2.0E-85 T 13-09-2016 PMA3_RS24485 efbc6a8c89c107ca496a66a213c40478 469 SUPERFAMILY SSF53383 106 461 3.3E-73 T 13-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase PMA3_RS24485 efbc6a8c89c107ca496a66a213c40478 469 Gene3D G3DSA:1.10.10.10 11 83 1.7E-22 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS24485 efbc6a8c89c107ca496a66a213c40478 469 PANTHER PTHR11751:SF386 95 468 2.0E-85 T 13-09-2016 PMA3_RS24485 efbc6a8c89c107ca496a66a213c40478 469 Gene3D G3DSA:3.40.640.10 149 364 3.2E-54 T 13-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PMA3_RS24485 efbc6a8c89c107ca496a66a213c40478 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 2.3E-17 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS24485 efbc6a8c89c107ca496a66a213c40478 469 SMART SM00345 23 82 1.2E-16 T 13-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PMA3_RS21015 48812140c44b34f793c3d0d13440314d 383 PANTHER PTHR31686:SF1 21 377 7.6E-124 T 13-09-2016 PMA3_RS21015 48812140c44b34f793c3d0d13440314d 383 Pfam PF03595 Voltage-dependent anion channel 26 364 1.8E-81 T 13-09-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 PMA3_RS21015 48812140c44b34f793c3d0d13440314d 383 PANTHER PTHR31686 21 377 7.6E-124 T 13-09-2016 PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 SMART SM00354 15 85 8.2E-20 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 SUPERFAMILY SSF47413 15 73 3.19E-14 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 Gene3D G3DSA:3.40.50.2300 189 321 1.6E-36 T 13-09-2016 PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 4.4E-13 T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 Gene3D G3DSA:3.40.50.2300 65 188 9.4E-33 T 13-09-2016 PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 Pfam PF13377 Periplasmic binding protein-like domain 182 343 4.2E-29 T 13-09-2016 PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 PANTHER PTHR30146:SF2 15 343 9.8E-148 T 13-09-2016 PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 Gene3D G3DSA:1.10.260.40 14 64 1.3E-18 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 PANTHER PTHR30146 15 343 9.8E-148 T 13-09-2016 PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 SUPERFAMILY SSF53822 73 340 4.53E-51 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS22950 7f23063b87791f38411781f6319f93a5 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 18 36 - T 13-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 9.5E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 9.5E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.5E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 9.5E-18 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 PANTHER PTHR24322 146 178 7.1E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 PANTHER PTHR24322:SF376 6 130 7.1E-39 T 13-09-2016 PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 PANTHER PTHR24322:SF376 146 178 7.1E-39 T 13-09-2016 PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 Gene3D G3DSA:3.40.50.720 5 210 2.1E-49 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 Pfam PF00106 short chain dehydrogenase 6 186 3.9E-37 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 SUPERFAMILY SSF51735 4 242 9.66E-55 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS22430 5f0f45d7c56b52be03477c79048992f4 249 PANTHER PTHR24322 6 130 7.1E-39 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS11020 a5bbd85043a19f6baaded159ac57660c 408 SUPERFAMILY SSF103365 10 408 6.02E-143 T 13-09-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PMA3_RS11020 a5bbd85043a19f6baaded159ac57660c 408 Pfam PF01139 tRNA-splicing ligase RtcB 33 408 1.2E-136 T 13-09-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PMA3_RS11020 a5bbd85043a19f6baaded159ac57660c 408 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 33 62 - T 13-09-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PMA3_RS11020 a5bbd85043a19f6baaded159ac57660c 408 PANTHER PTHR11118 9 408 2.2E-207 T 13-09-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PMA3_RS11020 a5bbd85043a19f6baaded159ac57660c 408 PANTHER PTHR11118:SF3 9 408 2.2E-207 T 13-09-2016 PMA3_RS26995 35aa0c192f62e82a1646bd7a7ce2b9bc 236 SMART SM00382 31 228 9.4E-10 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS26995 35aa0c192f62e82a1646bd7a7ce2b9bc 236 Gene3D G3DSA:3.40.50.300 4 220 8.9E-54 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26995 35aa0c192f62e82a1646bd7a7ce2b9bc 236 SUPERFAMILY SSF52540 5 225 4.66E-49 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS26995 35aa0c192f62e82a1646bd7a7ce2b9bc 236 PANTHER PTHR24220 7 226 3.8E-77 T 13-09-2016 PMA3_RS26995 35aa0c192f62e82a1646bd7a7ce2b9bc 236 PANTHER PTHR24220:SF578 7 226 3.8E-77 T 13-09-2016 PMA3_RS26995 35aa0c192f62e82a1646bd7a7ce2b9bc 236 Pfam PF00005 ABC transporter 26 180 1.7E-29 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS30240 f43e20e7b3b3742749132c742a287bbd 133 PANTHER PTHR33337 5 131 2.0E-44 T 13-09-2016 PMA3_RS30240 f43e20e7b3b3742749132c742a287bbd 133 SUPERFAMILY SSF51316 2 128 4.81E-42 T 13-09-2016 IPR011057 Mss4-like PMA3_RS30240 f43e20e7b3b3742749132c742a287bbd 133 Gene3D G3DSA:3.90.1590.10 3 130 3.1E-38 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS30240 f43e20e7b3b3742749132c742a287bbd 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 113 1.3E-21 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS30240 f43e20e7b3b3742749132c742a287bbd 133 PANTHER PTHR33337:SF4 5 131 2.0E-44 T 13-09-2016 PMA3_RS09345 c48ca8ee0b2c840d716d69ce1531478a 70 SUPERFAMILY SSF50249 3 68 1.78E-25 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS09345 c48ca8ee0b2c840d716d69ce1531478a 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 13-09-2016 IPR019844 Cold-shock conserved site PMA3_RS09345 c48ca8ee0b2c840d716d69ce1531478a 70 PIRSF PIRSF002599 1 70 5.0E-24 T 13-09-2016 IPR012156 Cold shock, CspA GO:0003676 PMA3_RS09345 c48ca8ee0b2c840d716d69ce1531478a 70 SMART SM00357 6 70 8.6E-27 T 13-09-2016 IPR011129 Cold shock protein GO:0003676 PMA3_RS09345 c48ca8ee0b2c840d716d69ce1531478a 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 2.1E-29 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS09345 c48ca8ee0b2c840d716d69ce1531478a 70 PANTHER PTHR11544 1 69 2.0E-34 T 13-09-2016 PMA3_RS09345 c48ca8ee0b2c840d716d69ce1531478a 70 Gene3D G3DSA:2.40.50.140 5 68 2.4E-30 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS09345 c48ca8ee0b2c840d716d69ce1531478a 70 PRINTS PR00050 Cold shock protein signature 7 22 1.4E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS09345 c48ca8ee0b2c840d716d69ce1531478a 70 PRINTS PR00050 Cold shock protein signature 28 37 1.4E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS09345 c48ca8ee0b2c840d716d69ce1531478a 70 PRINTS PR00050 Cold shock protein signature 43 61 1.4E-16 T 13-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PMA3_RS17900 c9b9bb163a05825649209a12ed8b5631 392 Gene3D G3DSA:3.30.9.10 91 143 1.5E-12 T 13-09-2016 PMA3_RS17900 c9b9bb163a05825649209a12ed8b5631 392 Gene3D G3DSA:3.30.9.10 222 314 1.5E-12 T 13-09-2016 PMA3_RS17900 c9b9bb163a05825649209a12ed8b5631 392 SUPERFAMILY SSF51905 9 222 1.71E-56 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17900 c9b9bb163a05825649209a12ed8b5631 392 SUPERFAMILY SSF51905 315 374 1.71E-56 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17900 c9b9bb163a05825649209a12ed8b5631 392 PANTHER PTHR13847 2 374 4.9E-63 T 13-09-2016 PMA3_RS17900 c9b9bb163a05825649209a12ed8b5631 392 Pfam PF01266 FAD dependent oxidoreductase 10 354 3.9E-60 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS17900 c9b9bb163a05825649209a12ed8b5631 392 Gene3D G3DSA:3.50.50.60 144 221 2.1E-66 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17900 c9b9bb163a05825649209a12ed8b5631 392 Gene3D G3DSA:3.50.50.60 315 374 2.1E-66 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS17900 c9b9bb163a05825649209a12ed8b5631 392 Gene3D G3DSA:3.50.50.60 4 85 2.1E-66 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS07045 d2cf08200aa5a302e32b1a10d7591642 268 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 210 5.5E-14 T 13-09-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 PMA3_RS07045 d2cf08200aa5a302e32b1a10d7591642 268 Gene3D G3DSA:3.40.720.10 2 229 3.6E-34 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS07045 d2cf08200aa5a302e32b1a10d7591642 268 SUPERFAMILY SSF53649 1 255 3.14E-46 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS00515 5ecdd02d97c8bde6972084c2223f002a 97 Pfam PF11275 Protein of unknown function (DUF3077) 9 83 2.3E-26 T 13-09-2016 IPR021427 Protein of unknown function DUF3077 PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 PANTHER PTHR10992 13 306 1.2E-45 T 13-09-2016 PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 PRINTS PR00412 Epoxide hydrolase signature 148 161 4.2E-7 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 PRINTS PR00412 Epoxide hydrolase signature 281 303 4.2E-7 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 PRINTS PR00412 Epoxide hydrolase signature 89 104 4.2E-7 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 134 147 1.2E-15 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 148 161 1.2E-15 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 104 1.2E-15 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 250 264 1.2E-15 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 SUPERFAMILY SSF53474 50 304 3.85E-53 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 Gene3D G3DSA:3.40.50.1820 45 305 1.7E-55 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS17480 c387222150a9f39063d53cdc93b571e9 318 Pfam PF12697 Alpha/beta hydrolase family 66 294 2.0E-17 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS13925 7286bc9f2e32ba38118ac980f775708f 267 PANTHER PTHR22908 13 251 1.7E-37 T 13-09-2016 PMA3_RS13925 7286bc9f2e32ba38118ac980f775708f 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 181 263 6.4E-25 T 13-09-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal PMA3_RS13925 7286bc9f2e32ba38118ac980f775708f 267 Pfam PF07728 AAA domain (dynein-related subfamily) 35 168 4.5E-33 T 13-09-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PMA3_RS13925 7286bc9f2e32ba38118ac980f775708f 267 Gene3D G3DSA:3.40.50.300 27 185 7.1E-29 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS13925 7286bc9f2e32ba38118ac980f775708f 267 SUPERFAMILY SSF52540 30 226 5.1E-32 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS11905 1cddeb777ddf11d019a72600aac88048 238 SUPERFAMILY SSF54909 125 226 2.65E-8 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS11905 1cddeb777ddf11d019a72600aac88048 238 Pfam PF07110 EthD domain 134 223 1.4E-4 T 13-09-2016 IPR009799 EthD domain PMA3_RS11905 1cddeb777ddf11d019a72600aac88048 238 Gene3D G3DSA:3.30.70.900 123 223 3.8E-5 T 13-09-2016 PMA3_RS09445 bf472382e46d433bb7c18ac754bd52f4 121 PANTHER PTHR10361 1 119 1.9E-44 T 13-09-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PMA3_RS09445 bf472382e46d433bb7c18ac754bd52f4 121 PANTHER PTHR10361:SF31 1 119 1.9E-44 T 13-09-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 PMA3_RS25705 5619eb1a4e3b72f52fbd531cf668e589 326 Pfam PF12835 Integrase 134 274 1.4E-10 T 13-09-2016 IPR024456 Integrase catalytic domain, putative PMA3_RS25705 5619eb1a4e3b72f52fbd531cf668e589 326 SUPERFAMILY SSF56349 60 282 3.53E-11 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS25705 5619eb1a4e3b72f52fbd531cf668e589 326 Gene3D G3DSA:1.10.150.130 36 105 2.5E-6 T 13-09-2016 IPR023109 Integrase/recombinase, N-terminal PMA3_RS25705 5619eb1a4e3b72f52fbd531cf668e589 326 Gene3D G3DSA:1.10.443.10 138 322 3.3E-8 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS09590 0aee67df6fd8ed92dca70724d45c8ea5 393 SUPERFAMILY SSF56935 32 392 2.15E-6 T 13-09-2016 PMA3_RS09590 0aee67df6fd8ed92dca70724d45c8ea5 393 Gene3D G3DSA:2.40.160.10 48 286 1.5E-4 T 13-09-2016 IPR023614 Porin domain PMA3_RS08410 181425bca149a38eaacfed75a99b5155 428 Gene3D G3DSA:1.25.40.10 84 234 6.5E-18 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS08410 181425bca149a38eaacfed75a99b5155 428 SUPERFAMILY SSF81901 84 241 1.4E-15 T 13-09-2016 PMA3_RS10490 fb0b041ed7734a6b73344970f9b82ecd 143 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 26 139 1.0E-24 T 13-09-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PMA3_RS09435 60ae30737c0ddf08f2648c9d5f4e9fe3 123 PANTHER PTHR33154 1 100 9.4E-23 T 13-09-2016 PMA3_RS09435 60ae30737c0ddf08f2648c9d5f4e9fe3 123 Gene3D G3DSA:1.10.10.10 8 92 5.8E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09435 60ae30737c0ddf08f2648c9d5f4e9fe3 123 SUPERFAMILY SSF46785 8 119 6.51E-25 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS09435 60ae30737c0ddf08f2648c9d5f4e9fe3 123 SMART SM00418 9 91 3.0E-29 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS09435 60ae30737c0ddf08f2648c9d5f4e9fe3 123 Pfam PF01022 Bacterial regulatory protein, arsR family 16 62 1.3E-13 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS09435 60ae30737c0ddf08f2648c9d5f4e9fe3 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.2E-21 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS09435 60ae30737c0ddf08f2648c9d5f4e9fe3 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 1.2E-21 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS09435 60ae30737c0ddf08f2648c9d5f4e9fe3 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 42 1.2E-21 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS09435 60ae30737c0ddf08f2648c9d5f4e9fe3 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.2E-21 T 13-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PMA3_RS10220 b045f36981eaf98709c12d5744dcae22 122 Gene3D G3DSA:3.90.180.10 3 115 1.5E-39 T 13-09-2016 IPR011032 GroES-like PMA3_RS10220 b045f36981eaf98709c12d5744dcae22 122 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 110 7.1E-25 T 13-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PMA3_RS10220 b045f36981eaf98709c12d5744dcae22 122 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 13-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PMA3_RS10220 b045f36981eaf98709c12d5744dcae22 122 SUPERFAMILY SSF50129 7 116 3.8E-36 T 13-09-2016 IPR011032 GroES-like PMA3_RS10220 b045f36981eaf98709c12d5744dcae22 122 PANTHER PTHR11695 15 109 1.6E-44 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS10220 b045f36981eaf98709c12d5744dcae22 122 PANTHER PTHR11695:SF261 15 109 1.6E-44 T 13-09-2016 PMA3_RS17740 ef29feaed100f16ae851a90c9dab614b 240 PANTHER PTHR13903:SF7 1 239 1.8E-111 T 13-09-2016 PMA3_RS17740 ef29feaed100f16ae851a90c9dab614b 240 PANTHER PTHR13903 1 239 1.8E-111 T 13-09-2016 IPR012093 Pirin PMA3_RS17740 ef29feaed100f16ae851a90c9dab614b 240 SUPERFAMILY SSF51182 1 233 1.46E-74 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS17740 ef29feaed100f16ae851a90c9dab614b 240 Gene3D G3DSA:2.60.120.10 4 235 5.4E-76 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS17740 ef29feaed100f16ae851a90c9dab614b 240 PIRSF PIRSF006232 1 238 2.8E-51 T 13-09-2016 IPR012093 Pirin PMA3_RS17740 ef29feaed100f16ae851a90c9dab614b 240 Pfam PF02678 Pirin 12 119 9.4E-35 T 13-09-2016 IPR003829 Pirin, N-terminal domain PMA3_RS04930 60dbc69b91441cde1d48eb4f065eeb74 92 PANTHER PTHR37485 5 91 2.6E-41 T 13-09-2016 PMA3_RS04930 60dbc69b91441cde1d48eb4f065eeb74 92 Pfam PF04977 Septum formation initiator 14 90 2.7E-22 T 13-09-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PMA3_RS04930 60dbc69b91441cde1d48eb4f065eeb74 92 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 92 31.614 T 13-09-2016 IPR023081 Cell division protein FtsB PMA3_RS04930 60dbc69b91441cde1d48eb4f065eeb74 92 PANTHER PTHR37485:SF1 5 91 2.6E-41 T 13-09-2016 PMA3_RS09130 b5877d236afdf9715095268e2ba057b0 593 PANTHER PTHR34384 22 593 3.4E-74 T 13-09-2016 PMA3_RS09130 b5877d236afdf9715095268e2ba057b0 593 PANTHER PTHR34384:SF1 22 593 3.4E-74 T 13-09-2016 PMA3_RS09130 b5877d236afdf9715095268e2ba057b0 593 Pfam PF04183 IucA / IucC family 158 385 1.1E-41 T 13-09-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 PMA3_RS09130 b5877d236afdf9715095268e2ba057b0 593 Pfam PF06276 Ferric iron reductase FhuF-like transporter 416 576 5.7E-35 T 13-09-2016 IPR022770 Ferric iron reductase FhuF domain PMA3_RS28605 1e5a237e098731a19569f5d5c2503419 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 8.7E-10 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS28605 1e5a237e098731a19569f5d5c2503419 223 PANTHER PTHR30055:SF30 2 194 8.8E-57 T 13-09-2016 PMA3_RS28605 1e5a237e098731a19569f5d5c2503419 223 Gene3D G3DSA:1.10.357.10 4 188 8.1E-25 T 13-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PMA3_RS28605 1e5a237e098731a19569f5d5c2503419 223 Pfam PF13972 Bacterial transcriptional repressor 60 203 7.8E-46 T 13-09-2016 IPR025722 Bacterial transcriptional repressor TetR PMA3_RS28605 1e5a237e098731a19569f5d5c2503419 223 PANTHER PTHR30055 2 194 8.8E-57 T 13-09-2016 PMA3_RS28605 1e5a237e098731a19569f5d5c2503419 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 9.0E-7 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS28605 1e5a237e098731a19569f5d5c2503419 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 9.0E-7 T 13-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PMA3_RS28605 1e5a237e098731a19569f5d5c2503419 223 SUPERFAMILY SSF46689 4 75 1.54E-13 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS16580 6671819dbe282c2da569c96e43e42487 279 Gene3D G3DSA:3.20.20.140 42 177 1.3E-5 T 13-09-2016 PMA3_RS13780 249317eb3b61b6e5b310a805366dbf3b 555 SMART SM00990 436 550 4.2E-46 T 13-09-2016 IPR014883 VRR-NUC domain GO:0016788 PMA3_RS13780 249317eb3b61b6e5b310a805366dbf3b 555 PANTHER PTHR15749:SF3 11 550 3.7E-165 T 13-09-2016 PMA3_RS13780 249317eb3b61b6e5b310a805366dbf3b 555 PANTHER PTHR15749 11 550 3.7E-165 T 13-09-2016 IPR033315 Fanconi-associated nuclease 1-like GO:0004518|GO:0036297 PMA3_RS13780 249317eb3b61b6e5b310a805366dbf3b 555 Pfam PF08774 VRR-NUC domain 438 550 6.3E-31 T 13-09-2016 IPR014883 VRR-NUC domain GO:0016788 PMA3_RS14425 8fb04247e38ad01c7a94545f9069ee5f 385 Gene3D G3DSA:3.40.50.300 3 204 1.2E-14 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS14425 8fb04247e38ad01c7a94545f9069ee5f 385 SUPERFAMILY SSF52540 5 263 6.59E-17 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01440 6f932d9875ea6fdbf93782d89a1ae001 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.017 T 13-09-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PMA3_RS01440 6f932d9875ea6fdbf93782d89a1ae001 176 Gene3D G3DSA:3.60.20.10 2 171 1.1E-81 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS01440 6f932d9875ea6fdbf93782d89a1ae001 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 171 4.1E-84 T 13-09-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PMA3_RS01440 6f932d9875ea6fdbf93782d89a1ae001 176 Pfam PF00227 Proteasome subunit 2 165 5.1E-19 T 13-09-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 PMA3_RS01440 6f932d9875ea6fdbf93782d89a1ae001 176 PANTHER PTHR32194 2 171 3.6E-120 T 13-09-2016 PMA3_RS01440 6f932d9875ea6fdbf93782d89a1ae001 176 PIRSF PIRSF039093 1 175 2.2E-84 T 13-09-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PMA3_RS01440 6f932d9875ea6fdbf93782d89a1ae001 176 SUPERFAMILY SSF56235 2 170 2.85E-55 T 13-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PMA3_RS15745 1649d3e2d3caf5ce768743f504292f1b 387 PANTHER PTHR40252 2 387 1.3E-141 T 13-09-2016 PMA3_RS15745 1649d3e2d3caf5ce768743f504292f1b 387 SMART SM00897 34 235 1.6E-57 T 13-09-2016 IPR013702 FIST domain, N-terminal PMA3_RS15745 1649d3e2d3caf5ce768743f504292f1b 387 SMART SM01204 236 366 2.8E-32 T 13-09-2016 IPR019494 FIST, C-domain PMA3_RS15745 1649d3e2d3caf5ce768743f504292f1b 387 Pfam PF10442 FIST C domain 236 364 1.4E-13 T 13-09-2016 IPR019494 FIST, C-domain PMA3_RS15745 1649d3e2d3caf5ce768743f504292f1b 387 Pfam PF08495 FIST N domain 37 233 5.7E-34 T 13-09-2016 IPR013702 FIST domain, N-terminal PMA3_RS15745 1649d3e2d3caf5ce768743f504292f1b 387 PANTHER PTHR40252:SF2 2 387 1.3E-141 T 13-09-2016 PMA3_RS22715 5751838fe8a91f870122e1a64d0cde48 521 Gene3D G3DSA:2.40.170.10 107 521 2.8E-132 T 13-09-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PMA3_RS22715 5751838fe8a91f870122e1a64d0cde48 521 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 115 517 0.0 T 13-09-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PMA3_RS22715 5751838fe8a91f870122e1a64d0cde48 521 SUPERFAMILY SSF56935 108 521 1.95E-117 T 13-09-2016 PMA3_RS22715 5751838fe8a91f870122e1a64d0cde48 521 Pfam PF02264 LamB porin 111 521 2.2E-101 T 13-09-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PMA3_RS22715 5751838fe8a91f870122e1a64d0cde48 521 PANTHER PTHR38762 108 521 5.9E-15 T 13-09-2016 PMA3_RS19245 a97dbba5264eb6a6edccec34b3716243 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 136 3.3E-16 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS19245 a97dbba5264eb6a6edccec34b3716243 670 Pfam PF00593 TonB dependent receptor 438 668 1.2E-30 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS19245 a97dbba5264eb6a6edccec34b3716243 670 Gene3D G3DSA:2.40.170.20 153 668 1.2E-150 T 13-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PMA3_RS19245 a97dbba5264eb6a6edccec34b3716243 670 PANTHER PTHR32552 30 670 8.3E-232 T 13-09-2016 PMA3_RS19245 a97dbba5264eb6a6edccec34b3716243 670 PANTHER PTHR32552 2 7 8.3E-232 T 13-09-2016 PMA3_RS19245 a97dbba5264eb6a6edccec34b3716243 670 PANTHER PTHR32552:SF29 30 670 8.3E-232 T 13-09-2016 PMA3_RS19245 a97dbba5264eb6a6edccec34b3716243 670 PANTHER PTHR32552:SF29 2 7 8.3E-232 T 13-09-2016 PMA3_RS19245 a97dbba5264eb6a6edccec34b3716243 670 SUPERFAMILY SSF56935 29 669 2.02E-136 T 13-09-2016 PMA3_RS19245 a97dbba5264eb6a6edccec34b3716243 670 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 40 668 1.0E-105 T 13-09-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PMA3_RS19245 a97dbba5264eb6a6edccec34b3716243 670 Gene3D G3DSA:2.170.130.10 21 144 8.2E-35 T 13-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PMA3_RS16325 d62e69630b17213c0633af73ccc0e569 108 SUPERFAMILY SSF46626 7 103 4.28E-19 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16325 d62e69630b17213c0633af73ccc0e569 108 Gene3D G3DSA:1.10.760.10 18 103 3.7E-18 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS16325 d62e69630b17213c0633af73ccc0e569 108 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 30 99 9.4E-12 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS29660 2199c38e0350a2524937ae147e8b75a7 128 PIRSF PIRSF029720 1 125 2.2E-49 T 13-09-2016 IPR014558 Uncharacterised conserved lipoprotein PMA3_RS29660 2199c38e0350a2524937ae147e8b75a7 128 PANTHER PTHR39335 3 124 2.9E-44 T 13-09-2016 PMA3_RS29660 2199c38e0350a2524937ae147e8b75a7 128 Pfam PF03640 Secreted repeat of unknown function 81 123 1.7E-18 T 13-09-2016 IPR005297 Lipoprotein repeat PMA3_RS29660 2199c38e0350a2524937ae147e8b75a7 128 Pfam PF03640 Secreted repeat of unknown function 32 69 1.7E-14 T 13-09-2016 IPR005297 Lipoprotein repeat PMA3_RS08780 bdd85f2ec59775219e0ef025353a2991 141 ProDom PD031864 YIGF SIMILAR ESCHERICHIA COLI MEMBRANE XCC4223 XAC4357 XAC2195 15 133 8.0E-37 T 13-09-2016 PMA3_RS08780 bdd85f2ec59775219e0ef025353a2991 141 Pfam PF10947 Protein of unknown function (DUF2628) 15 126 2.0E-22 T 13-09-2016 IPR024399 Protein of unknown function DUF2628 PMA3_RS26955 e5aeccf3af514476cdb6933049083bb3 220 Pfam PF00677 Lumazine binding domain 100 184 1.9E-21 T 13-09-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26955 e5aeccf3af514476cdb6933049083bb3 220 Pfam PF00677 Lumazine binding domain 3 87 1.9E-20 T 13-09-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26955 e5aeccf3af514476cdb6933049083bb3 220 PIRSF PIRSF000498 1 212 1.4E-76 T 13-09-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26955 e5aeccf3af514476cdb6933049083bb3 220 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 4.0E-67 T 13-09-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26955 e5aeccf3af514476cdb6933049083bb3 220 PANTHER PTHR21098 1 220 7.3E-100 T 13-09-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PMA3_RS26955 e5aeccf3af514476cdb6933049083bb3 220 Gene3D G3DSA:2.40.30.20 5 104 1.5E-29 T 13-09-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS26955 e5aeccf3af514476cdb6933049083bb3 220 Gene3D G3DSA:2.40.30.20 105 194 1.9E-32 T 13-09-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PMA3_RS26955 e5aeccf3af514476cdb6933049083bb3 220 SUPERFAMILY SSF63380 93 194 2.3E-32 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS26955 e5aeccf3af514476cdb6933049083bb3 220 SUPERFAMILY SSF63380 1 88 1.36E-24 T 13-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PMA3_RS13920 2323ec9cb0dff4810438e71c2ab829ca 673 Pfam PF00092 von Willebrand factor type A domain 484 634 1.6E-6 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS13920 2323ec9cb0dff4810438e71c2ab829ca 673 Gene3D G3DSA:3.40.50.410 482 634 3.1E-6 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS13920 2323ec9cb0dff4810438e71c2ab829ca 673 PANTHER PTHR41248 280 673 3.6E-59 T 13-09-2016 PMA3_RS13920 2323ec9cb0dff4810438e71c2ab829ca 673 SMART SM00327 481 664 1.1E-10 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS13920 2323ec9cb0dff4810438e71c2ab829ca 673 SUPERFAMILY SSF53300 482 663 6.86E-17 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS13920 2323ec9cb0dff4810438e71c2ab829ca 673 PANTHER PTHR41248:SF1 280 673 3.6E-59 T 13-09-2016 PMA3_RS10400 206be34e18dcf7d660ea51cdc7786e35 336 PANTHER PTHR30106 3 334 5.2E-60 T 13-09-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PMA3_RS10400 206be34e18dcf7d660ea51cdc7786e35 336 Pfam PF03601 Conserved hypothetical protein 698 18 316 4.3E-72 T 13-09-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PMA3_RS00410 fd9f8bf4fbbaca48d24939c076b1e22a 176 Gene3D G3DSA:2.40.50.140 114 167 5.7E-9 T 13-09-2016 IPR012340 Nucleic acid-binding, OB-fold PMA3_RS00410 fd9f8bf4fbbaca48d24939c076b1e22a 176 Pfam PF01957 NfeD-like C-terminal, partner-binding 36 168 4.2E-29 T 13-09-2016 IPR002810 NfeD-like, C-terminal domain PMA3_RS00410 fd9f8bf4fbbaca48d24939c076b1e22a 176 SUPERFAMILY SSF141322 102 167 1.96E-10 T 13-09-2016 PMA3_RS02230 bcb0ee110d0e174291e07d2ade650bc3 377 PANTHER PTHR30483:SF20 7 374 9.3E-124 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS02230 bcb0ee110d0e174291e07d2ade650bc3 377 Gene3D G3DSA:3.40.50.2300 28 227 6.2E-69 T 13-09-2016 PMA3_RS02230 bcb0ee110d0e174291e07d2ade650bc3 377 Pfam PF13458 Periplasmic binding protein 29 369 1.5E-65 T 13-09-2016 IPR028081 Leucine-binding protein domain PMA3_RS02230 bcb0ee110d0e174291e07d2ade650bc3 377 SUPERFAMILY SSF53822 28 372 1.5E-94 T 13-09-2016 IPR028082 Periplasmic binding protein-like I PMA3_RS02230 bcb0ee110d0e174291e07d2ade650bc3 377 PANTHER PTHR30483 7 374 9.3E-124 T 13-09-2016 PMA3_RS02230 bcb0ee110d0e174291e07d2ade650bc3 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 334 349 2.3E-23 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS02230 bcb0ee110d0e174291e07d2ade650bc3 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 2.3E-23 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS02230 bcb0ee110d0e174291e07d2ade650bc3 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 70 88 2.3E-23 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS02230 bcb0ee110d0e174291e07d2ade650bc3 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 51 67 2.3E-23 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS02230 bcb0ee110d0e174291e07d2ade650bc3 377 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 283 296 2.3E-23 T 13-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 Gene3D G3DSA:2.40.110.10 119 215 2.0E-40 T 13-09-2016 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 115 8.1E-38 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 PIRSF PIRSF016578 2 374 3.5E-22 T 13-09-2016 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 1.2E-50 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 SUPERFAMILY SSF56645 4 240 1.7E-85 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 13-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 Gene3D G3DSA:1.10.540.10 4 117 3.2E-40 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 Gene3D G3DSA:1.20.140.10 216 375 2.8E-71 T 13-09-2016 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 2.0E-26 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 PANTHER PTHR10909:SF305 1 375 4.3E-176 T 13-09-2016 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 SUPERFAMILY SSF47203 225 375 8.54E-58 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS14840 3c3c538c924bf41c1d797a6317a4a349 375 PANTHER PTHR10909 1 375 4.3E-176 T 13-09-2016 PMA3_RS13715 3a74ea49bab0e7856ada2cbba05cb32a 179 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 164 2.0E-11 T 13-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PMA3_RS13715 3a74ea49bab0e7856ada2cbba05cb32a 179 Gene3D G3DSA:3.40.50.970 10 160 3.4E-9 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS13715 3a74ea49bab0e7856ada2cbba05cb32a 179 SUPERFAMILY SSF52518 12 161 1.03E-15 T 13-09-2016 IPR029061 Thiamin diphosphate-binding fold PMA3_RS05500 1955c2fa3eb4beb77691d11a252b7ace 101 Pfam PF03413 Peptidase propeptide and YPEB domain 39 97 5.9E-12 T 13-09-2016 IPR025711 PepSY domain PMA3_RS07475 7cc7aac34167847c77fff323fd571ed2 345 Gene3D G3DSA:3.90.180.10 7 142 5.9E-55 T 13-09-2016 IPR011032 GroES-like PMA3_RS07475 7cc7aac34167847c77fff323fd571ed2 345 PANTHER PTHR11695 26 345 6.2E-172 T 13-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PMA3_RS07475 7cc7aac34167847c77fff323fd571ed2 345 Pfam PF00107 Zinc-binding dehydrogenase 161 286 2.9E-21 T 13-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PMA3_RS07475 7cc7aac34167847c77fff323fd571ed2 345 Pfam PF16884 N-terminal domain of oxidoreductase 10 115 1.5E-41 T 13-09-2016 PMA3_RS07475 7cc7aac34167847c77fff323fd571ed2 345 SMART SM00829 21 339 2.3E-6 T 13-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PMA3_RS07475 7cc7aac34167847c77fff323fd571ed2 345 Gene3D G3DSA:3.40.50.720 143 309 1.4E-66 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS07475 7cc7aac34167847c77fff323fd571ed2 345 PANTHER PTHR11695:SF557 26 345 6.2E-172 T 13-09-2016 PMA3_RS07475 7cc7aac34167847c77fff323fd571ed2 345 SUPERFAMILY SSF50129 6 146 1.01E-42 T 13-09-2016 IPR011032 GroES-like PMA3_RS07475 7cc7aac34167847c77fff323fd571ed2 345 SUPERFAMILY SSF51735 126 307 4.51E-46 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 194 2.0E-16 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 SUPERFAMILY SSF56784 10 216 4.27E-51 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 PANTHER PTHR18901 3 226 3.0E-95 T 13-09-2016 PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 9.9E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 9.9E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 9.9E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 9.9E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 9.9E-7 T 13-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 Gene3D G3DSA:3.40.50.1000 6 25 3.3E-51 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 Gene3D G3DSA:3.40.50.1000 96 227 3.3E-51 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 PANTHER PTHR18901:SF38 3 226 3.0E-95 T 13-09-2016 PMA3_RS20560 21c58931c8fa42c3c3f683430369e783 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 195 1.8E-25 T 13-09-2016 IPR023214 HAD-like domain PMA3_RS16290 4ebbdb41598cf52fc2cf811a924208d6 476 PANTHER PTHR10422 19 456 6.3E-104 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS16290 4ebbdb41598cf52fc2cf811a924208d6 476 SUPERFAMILY SSF81442 12 460 7.33E-85 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS16290 4ebbdb41598cf52fc2cf811a924208d6 476 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 203 259 - T 13-09-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS16290 4ebbdb41598cf52fc2cf811a924208d6 476 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 444 9.7E-79 T 13-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS16290 4ebbdb41598cf52fc2cf811a924208d6 476 PANTHER PTHR10422:SF24 19 456 6.3E-104 T 13-09-2016 PMA3_RS16290 4ebbdb41598cf52fc2cf811a924208d6 476 Gene3D G3DSA:1.20.210.10 12 457 5.4E-16 T 13-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PMA3_RS00685 c37b6fd8015ea4970a8c1d66e611db6f 269 Gene3D G3DSA:3.40.190.10 29 158 2.3E-46 T 13-09-2016 PMA3_RS00685 c37b6fd8015ea4970a8c1d66e611db6f 269 PANTHER PTHR30429 1 268 7.1E-98 T 13-09-2016 IPR004872 Lipoprotein NlpA family PMA3_RS00685 c37b6fd8015ea4970a8c1d66e611db6f 269 Pfam PF03180 NLPA lipoprotein 31 267 1.4E-69 T 13-09-2016 IPR004872 Lipoprotein NlpA family PMA3_RS00685 c37b6fd8015ea4970a8c1d66e611db6f 269 SUPERFAMILY SSF53850 31 267 3.44E-64 T 13-09-2016 PMA3_RS25830 e8eef0c3b183884cb8c16afad6fd32aa 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 211 3.5E-15 T 13-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PMA3_RS25830 e8eef0c3b183884cb8c16afad6fd32aa 297 PANTHER PTHR10366:SF262 2 292 7.0E-40 T 13-09-2016 PMA3_RS25830 e8eef0c3b183884cb8c16afad6fd32aa 297 Gene3D G3DSA:3.40.50.720 1 293 1.1E-35 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS25830 e8eef0c3b183884cb8c16afad6fd32aa 297 SUPERFAMILY SSF51735 1 294 1.09E-41 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS25830 e8eef0c3b183884cb8c16afad6fd32aa 297 PANTHER PTHR10366 2 292 7.0E-40 T 13-09-2016 PMA3_RS08990 7d9fbf24869b7724769e9ae9a40ea452 207 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 96 5.2E-12 T 13-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PMA3_RS08990 7d9fbf24869b7724769e9ae9a40ea452 207 SUPERFAMILY SSF103473 102 194 8.37E-5 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS04440 656bd9f0cb23eefcf0f1974634fbe351 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS04440 656bd9f0cb23eefcf0f1974634fbe351 438 Pfam PF00083 Sugar (and other) transporter 251 435 1.5E-12 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS04440 656bd9f0cb23eefcf0f1974634fbe351 438 Pfam PF00083 Sugar (and other) transporter 24 232 4.5E-25 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS04440 656bd9f0cb23eefcf0f1974634fbe351 438 PANTHER PTHR23508:SF16 21 435 1.5E-209 T 13-09-2016 PMA3_RS04440 656bd9f0cb23eefcf0f1974634fbe351 438 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 29 419 3.0E-134 T 13-09-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 PMA3_RS04440 656bd9f0cb23eefcf0f1974634fbe351 438 PANTHER PTHR23508 21 435 1.5E-209 T 13-09-2016 PMA3_RS04440 656bd9f0cb23eefcf0f1974634fbe351 438 Gene3D G3DSA:1.20.1250.20 26 223 2.0E-21 T 13-09-2016 PMA3_RS04440 656bd9f0cb23eefcf0f1974634fbe351 438 Gene3D G3DSA:1.20.1250.20 250 432 1.3E-19 T 13-09-2016 PMA3_RS04440 656bd9f0cb23eefcf0f1974634fbe351 438 SUPERFAMILY SSF103473 12 435 1.83E-64 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 3.7E-54 T 13-09-2016 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 3.7E-54 T 13-09-2016 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 249 275 3.7E-54 T 13-09-2016 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 3.7E-54 T 13-09-2016 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 3.7E-54 T 13-09-2016 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 3.7E-54 T 13-09-2016 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 3.7E-54 T 13-09-2016 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PANTHER PTHR22773 1 570 1.3E-223 T 13-09-2016 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 612 2.1E-232 T 13-09-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 1.4E-7 T 13-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 419 441 1.4E-7 T 13-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 60 84 1.4E-7 T 13-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 360 382 1.4E-7 T 13-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 4.2E-21 T 13-09-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 Pfam PF00361 Proton-conducting membrane transporter 136 427 1.4E-88 T 13-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PMA3_RS19720 2b3247d08af3f239c8eb31d093e1e9aa 617 PANTHER PTHR22773:SF50 1 570 1.3E-223 T 13-09-2016 PMA3_RS23245 840faf4b61688ac8d21af8d4f6fee820 153 TIGRFAM TIGR02801 tolR: protein TolR 14 151 2.8E-43 T 13-09-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 PMA3_RS23245 840faf4b61688ac8d21af8d4f6fee820 153 PANTHER PTHR30558:SF7 1 153 7.3E-53 T 13-09-2016 PMA3_RS23245 840faf4b61688ac8d21af8d4f6fee820 153 PANTHER PTHR30558 1 153 7.3E-53 T 13-09-2016 PMA3_RS23245 840faf4b61688ac8d21af8d4f6fee820 153 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 151 3.9E-26 T 13-09-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PMA3_RS02830 a53a2ee8a809335f6d1dd07d2b92b8eb 481 Pfam PF13520 Amino acid permease 20 414 7.6E-37 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS02830 a53a2ee8a809335f6d1dd07d2b92b8eb 481 PIRSF PIRSF006060 1 471 4.8E-77 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS02830 a53a2ee8a809335f6d1dd07d2b92b8eb 481 PANTHER PTHR11785 11 452 1.3E-66 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS26725 11a0a09114d7c67a342f9a9fa762ccc7 270 Gene3D G3DSA:3.40.390.10 44 250 2.5E-33 T 13-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PMA3_RS26725 11a0a09114d7c67a342f9a9fa762ccc7 270 PANTHER PTHR30164 1 270 1.0E-96 T 13-09-2016 PMA3_RS26725 11a0a09114d7c67a342f9a9fa762ccc7 270 Pfam PF06167 Glucose-regulated metallo-peptidase M90 5 249 8.6E-89 T 13-09-2016 IPR010384 MtfA family PMA3_RS26725 11a0a09114d7c67a342f9a9fa762ccc7 270 SUPERFAMILY SSF55486 44 251 4.69E-40 T 13-09-2016 PMA3_RS13630 165c1c5dd2877e529d43a7fb969940e3 127 Pfam PF03992 Antibiotic biosynthesis monooxygenase 27 102 5.0E-10 T 13-09-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PMA3_RS13630 165c1c5dd2877e529d43a7fb969940e3 127 Gene3D G3DSA:3.30.70.900 22 119 5.7E-27 T 13-09-2016 PMA3_RS13630 165c1c5dd2877e529d43a7fb969940e3 127 PANTHER PTHR33336:SF3 21 119 8.7E-20 T 13-09-2016 PMA3_RS13630 165c1c5dd2877e529d43a7fb969940e3 127 SUPERFAMILY SSF54909 27 115 2.83E-20 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS13630 165c1c5dd2877e529d43a7fb969940e3 127 PANTHER PTHR33336 21 119 8.7E-20 T 13-09-2016 PMA3_RS11645 80e895c26396c68861ad56d4ff831646 389 Gene3D G3DSA:2.40.110.10 121 214 3.5E-30 T 13-09-2016 PMA3_RS11645 80e895c26396c68861ad56d4ff831646 389 Gene3D G3DSA:1.10.540.10 4 119 2.3E-25 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11645 80e895c26396c68861ad56d4ff831646 389 SUPERFAMILY SSF47203 227 386 6.6E-22 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS11645 80e895c26396c68861ad56d4ff831646 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 3.5E-21 T 13-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PMA3_RS11645 80e895c26396c68861ad56d4ff831646 389 Gene3D G3DSA:1.20.140.10 215 387 5.9E-36 T 13-09-2016 PMA3_RS11645 80e895c26396c68861ad56d4ff831646 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 212 1.3E-18 T 13-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PMA3_RS11645 80e895c26396c68861ad56d4ff831646 389 PANTHER PTHR10909 1 389 1.4E-110 T 13-09-2016 PMA3_RS11645 80e895c26396c68861ad56d4ff831646 389 SUPERFAMILY SSF56645 4 239 2.62E-62 T 13-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PMA3_RS11645 80e895c26396c68861ad56d4ff831646 389 PANTHER PTHR10909:SF229 1 389 1.4E-110 T 13-09-2016 PMA3_RS11645 80e895c26396c68861ad56d4ff831646 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 379 2.1E-27 T 13-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PMA3_RS29715 be7d100409194111e33b6e7166985ddf 432 PANTHER PTHR23508 8 429 1.1E-253 T 13-09-2016 PMA3_RS29715 be7d100409194111e33b6e7166985ddf 432 PANTHER PTHR23508:SF5 8 429 1.1E-253 T 13-09-2016 PMA3_RS29715 be7d100409194111e33b6e7166985ddf 432 Gene3D G3DSA:1.20.1250.20 24 230 1.8E-19 T 13-09-2016 PMA3_RS29715 be7d100409194111e33b6e7166985ddf 432 Gene3D G3DSA:1.20.1250.20 252 428 2.1E-14 T 13-09-2016 PMA3_RS29715 be7d100409194111e33b6e7166985ddf 432 SUPERFAMILY SSF103473 11 428 2.09E-58 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS29715 be7d100409194111e33b6e7166985ddf 432 Pfam PF07690 Major Facilitator Superfamily 71 393 3.9E-26 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS07005 89ab91a27baa3d991e7f00405eb0db82 135 SUPERFAMILY SSF81901 37 123 8.89E-8 T 13-09-2016 PMA3_RS07005 89ab91a27baa3d991e7f00405eb0db82 135 Gene3D G3DSA:1.25.40.10 37 128 7.2E-10 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS28515 8d19c8cb236396e4a27c554289a03b5b 107 Pfam PF11872 Protein of unknown function (DUF3392) 4 107 1.1E-33 T 13-09-2016 IPR021813 Protein of unknown function DUF3392 PMA3_RS21300 d2c7c9b33137f646a04ba02904db93e9 283 Gene3D G3DSA:3.40.190.100 112 225 6.7E-34 T 13-09-2016 PMA3_RS21300 d2c7c9b33137f646a04ba02904db93e9 283 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 28 273 1.1E-61 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS21300 d2c7c9b33137f646a04ba02904db93e9 283 SUPERFAMILY SSF53850 24 283 1.98E-75 T 13-09-2016 PMA3_RS21300 d2c7c9b33137f646a04ba02904db93e9 283 Gene3D G3DSA:3.40.190.10 26 110 1.5E-39 T 13-09-2016 PMA3_RS21300 d2c7c9b33137f646a04ba02904db93e9 283 Gene3D G3DSA:3.40.190.10 226 283 1.5E-39 T 13-09-2016 PMA3_RS21300 d2c7c9b33137f646a04ba02904db93e9 283 PANTHER PTHR30177 1 277 1.5E-85 T 13-09-2016 PMA3_RS21300 d2c7c9b33137f646a04ba02904db93e9 283 PANTHER PTHR30177:SF0 1 277 1.5E-85 T 13-09-2016 PMA3_RS22720 3b1f084a76a4c1183ff080f36a61d0c6 424 Pfam PF01547 Bacterial extracellular solute-binding protein 43 334 2.8E-29 T 13-09-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 PMA3_RS22720 3b1f084a76a4c1183ff080f36a61d0c6 424 PANTHER PTHR30061 6 424 1.7E-58 T 13-09-2016 PMA3_RS22720 3b1f084a76a4c1183ff080f36a61d0c6 424 Gene3D G3DSA:3.40.190.10 154 354 2.7E-57 T 13-09-2016 PMA3_RS22720 3b1f084a76a4c1183ff080f36a61d0c6 424 SUPERFAMILY SSF53850 28 398 2.72E-76 T 13-09-2016 PMA3_RS22720 3b1f084a76a4c1183ff080f36a61d0c6 424 Gene3D G3DSA:3.40.190.10 37 153 2.6E-14 T 13-09-2016 PMA3_RS26865 077ad24410fa1473d40e01ba6d9c626d 539 Pfam PF08486 Stage II sporulation protein 306 366 3.7E-7 T 13-09-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal PMA3_RS26865 077ad24410fa1473d40e01ba6d9c626d 539 Pfam PF10062 Predicted secreted protein (DUF2300) 80 201 5.7E-37 T 13-09-2016 IPR018748 Domain of unknown function DUF2300, secreted PMA3_RS26865 077ad24410fa1473d40e01ba6d9c626d 539 Pfam PF10062 Predicted secreted protein (DUF2300) 403 522 2.3E-42 T 13-09-2016 IPR018748 Domain of unknown function DUF2300, secreted PMA3_RS18630 93c0500f9200f32b28cc8e60e7d8a876 232 Gene3D G3DSA:1.10.287.70 135 225 2.9E-13 T 13-09-2016 PMA3_RS18630 93c0500f9200f32b28cc8e60e7d8a876 232 SUPERFAMILY SSF81324 133 226 3.79E-16 T 13-09-2016 PMA3_RS18630 93c0500f9200f32b28cc8e60e7d8a876 232 Pfam PF07885 Ion channel 145 223 8.1E-13 T 13-09-2016 IPR013099 Potassium channel domain PMA3_RS10070 064f96ef6929e4be7f7287049544c36b 439 PANTHER PTHR13847 1 422 4.4E-98 T 13-09-2016 PMA3_RS10070 064f96ef6929e4be7f7287049544c36b 439 Pfam PF01266 FAD dependent oxidoreductase 37 393 6.0E-36 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS10070 064f96ef6929e4be7f7287049544c36b 439 PANTHER PTHR13847:SF196 1 422 4.4E-98 T 13-09-2016 PMA3_RS10070 064f96ef6929e4be7f7287049544c36b 439 Gene3D G3DSA:3.50.50.60 356 404 6.8E-31 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10070 064f96ef6929e4be7f7287049544c36b 439 Gene3D G3DSA:3.50.50.60 179 257 6.8E-31 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10070 064f96ef6929e4be7f7287049544c36b 439 Gene3D G3DSA:3.50.50.60 26 126 6.8E-31 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10070 064f96ef6929e4be7f7287049544c36b 439 SUPERFAMILY SSF51905 36 258 2.01E-30 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10070 064f96ef6929e4be7f7287049544c36b 439 SUPERFAMILY SSF51905 356 414 2.01E-30 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS10075 640f503f931822ebc12a65573b52faea 131 SUPERFAMILY SSF143100 2 62 1.57E-8 T 13-09-2016 PMA3_RS18065 48351337d1667c0572a31f8bc50019d4 281 SUPERFAMILY SSF53474 5 280 5.05E-69 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18065 48351337d1667c0572a31f8bc50019d4 281 Gene3D G3DSA:3.40.50.1820 9 280 8.3E-69 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18065 48351337d1667c0572a31f8bc50019d4 281 Pfam PF12697 Alpha/beta hydrolase family 31 273 6.2E-20 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18065 48351337d1667c0572a31f8bc50019d4 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 1.5E-27 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18065 48351337d1667c0572a31f8bc50019d4 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.5E-27 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18065 48351337d1667c0572a31f8bc50019d4 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 1.5E-27 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18065 48351337d1667c0572a31f8bc50019d4 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 225 239 1.5E-27 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18065 48351337d1667c0572a31f8bc50019d4 281 PANTHER PTHR10992 9 281 3.0E-57 T 13-09-2016 PMA3_RS10305 3c68f7759db28452ed60a5f74b894ead 344 SMART SM00342 252 334 7.3E-24 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10305 3c68f7759db28452ed60a5f74b894ead 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 204 1.5E-41 T 13-09-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PMA3_RS10305 3c68f7759db28452ed60a5f74b894ead 344 Gene3D G3DSA:1.10.10.60 291 336 4.7E-10 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10305 3c68f7759db28452ed60a5f74b894ead 344 SUPERFAMILY SSF46689 287 335 1.43E-9 T 13-09-2016 IPR009057 Homeodomain-like GO:0003677 PMA3_RS10305 3c68f7759db28452ed60a5f74b894ead 344 PANTHER PTHR11019:SF52 235 342 1.8E-21 T 13-09-2016 PMA3_RS10305 3c68f7759db28452ed60a5f74b894ead 344 Pfam PF12833 Helix-turn-helix domain 258 335 1.2E-16 T 13-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PMA3_RS10305 3c68f7759db28452ed60a5f74b894ead 344 PANTHER PTHR11019 235 342 1.8E-21 T 13-09-2016 PMA3_RS03685 9e010c598ede383bc27005dd9dec7dcc 174 PANTHER PTHR12350 32 152 2.0E-12 T 13-09-2016 PMA3_RS03685 9e010c598ede383bc27005dd9dec7dcc 174 SUPERFAMILY SSF82199 47 150 9.29E-16 T 13-09-2016 PMA3_RS03685 9e010c598ede383bc27005dd9dec7dcc 174 Gene3D G3DSA:2.170.270.10 92 150 2.4E-12 T 13-09-2016 PMA3_RS15315 15c7b52050491114cb2f9f9efb4c7626 86 Pfam PF07023 Protein of unknown function (DUF1315) 6 64 6.0E-26 T 13-09-2016 IPR009749 Protein of unknown function DUF1315 PMA3_RS00360 a02e382184d2ef59660bfa9820a9ef6c 239 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 3 233 7.3E-59 T 13-09-2016 IPR017746 Cellulose synthase operon protein BcsQ PMA3_RS00360 a02e382184d2ef59660bfa9820a9ef6c 239 Gene3D G3DSA:3.40.50.300 10 235 4.3E-19 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00360 a02e382184d2ef59660bfa9820a9ef6c 239 SUPERFAMILY SSF52540 9 236 7.5E-19 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00360 a02e382184d2ef59660bfa9820a9ef6c 239 Pfam PF06564 Cellulose biosynthesis protein BcsQ 3 232 9.3E-79 T 13-09-2016 IPR017746 Cellulose synthase operon protein BcsQ PMA3_RS14875 d0426b0ae4140b529b1c612475db8119 158 PANTHER PTHR31757 2 158 2.8E-90 T 13-09-2016 PMA3_RS14875 d0426b0ae4140b529b1c612475db8119 158 Gene3D G3DSA:3.10.450.50 14 157 2.9E-76 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS14875 d0426b0ae4140b529b1c612475db8119 158 Pfam PF07080 Protein of unknown function (DUF1348) 7 148 3.0E-73 T 13-09-2016 IPR009783 Protein of unknown function DUF1348 PMA3_RS14875 d0426b0ae4140b529b1c612475db8119 158 PANTHER PTHR31757:SF0 2 158 2.8E-90 T 13-09-2016 PMA3_RS14875 d0426b0ae4140b529b1c612475db8119 158 SUPERFAMILY SSF54427 5 158 4.56E-81 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS13385 dc4319c724888af826fe6e67fdc1a2cf 276 SUPERFAMILY SSF161098 6 276 6.64E-62 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS13385 dc4319c724888af826fe6e67fdc1a2cf 276 PANTHER PTHR32243 1 276 5.9E-131 T 13-09-2016 PMA3_RS13385 dc4319c724888af826fe6e67fdc1a2cf 276 PANTHER PTHR32243:SF11 1 276 5.9E-131 T 13-09-2016 PMA3_RS13385 dc4319c724888af826fe6e67fdc1a2cf 276 Gene3D G3DSA:1.10.3720.10 5 264 2.2E-53 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS13385 dc4319c724888af826fe6e67fdc1a2cf 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 269 2.1E-17 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS24805 7c5ad450c6b683f99c4790076c2539dc 121 Pfam PF07130 YebG protein 1 71 3.7E-24 T 13-09-2016 IPR009813 Uncharacterised protein family YebG PMA3_RS24805 7c5ad450c6b683f99c4790076c2539dc 121 Gene3D G3DSA:1.10.10.710 18 85 1.9E-26 T 13-09-2016 IPR009813 Uncharacterised protein family YebG PMA3_RS24535 a65f1d654c89c4162a69e9ca392dfc0c 503 Gene3D G3DSA:1.10.3290.10 172 432 5.1E-50 T 13-09-2016 IPR003812 Fido domain PMA3_RS24535 a65f1d654c89c4162a69e9ca392dfc0c 503 PANTHER PTHR13504:SF32 217 367 1.8E-16 T 13-09-2016 PMA3_RS24535 a65f1d654c89c4162a69e9ca392dfc0c 503 SUPERFAMILY SSF140931 217 372 2.22E-24 T 13-09-2016 IPR003812 Fido domain PMA3_RS24535 a65f1d654c89c4162a69e9ca392dfc0c 503 PANTHER PTHR13504 217 367 1.8E-16 T 13-09-2016 PMA3_RS24535 a65f1d654c89c4162a69e9ca392dfc0c 503 Pfam PF02661 Fic/DOC family 229 332 3.0E-14 T 13-09-2016 IPR003812 Fido domain PMA3_RS24245 e5aa71436d88835c351707ab7e5004ed 113 Gene3D G3DSA:3.10.20.30 1 101 2.8E-32 T 13-09-2016 IPR012675 Beta-grasp domain PMA3_RS24245 e5aa71436d88835c351707ab7e5004ed 113 PANTHER PTHR23426 7 110 7.7E-37 T 13-09-2016 PMA3_RS24245 e5aa71436d88835c351707ab7e5004ed 113 SUPERFAMILY SSF54292 5 107 3.74E-30 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS24245 e5aa71436d88835c351707ab7e5004ed 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 2.8E-58 T 13-09-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 PMA3_RS24245 e5aa71436d88835c351707ab7e5004ed 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 91 5.9E-10 T 13-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PMA3_RS24245 e5aa71436d88835c351707ab7e5004ed 113 PRINTS PR00355 Adrenodoxin signature 83 91 2.4E-9 T 13-09-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 PMA3_RS24245 e5aa71436d88835c351707ab7e5004ed 113 PRINTS PR00355 Adrenodoxin signature 42 52 2.4E-9 T 13-09-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 PMA3_RS24245 e5aa71436d88835c351707ab7e5004ed 113 PRINTS PR00355 Adrenodoxin signature 60 74 2.4E-9 T 13-09-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 PMA3_RS26660 1704128c44d6cda18ee5f6f15c520fb0 151 PANTHER PTHR13078 3 144 6.6E-38 T 13-09-2016 PMA3_RS26660 1704128c44d6cda18ee5f6f15c520fb0 151 SUPERFAMILY SSF54637 7 145 9.95E-38 T 13-09-2016 IPR029069 HotDog domain PMA3_RS26660 1704128c44d6cda18ee5f6f15c520fb0 151 Pfam PF01575 MaoC like domain 13 119 3.5E-27 T 13-09-2016 IPR002539 MaoC-like domain PMA3_RS26660 1704128c44d6cda18ee5f6f15c520fb0 151 Gene3D G3DSA:3.10.129.10 13 144 1.1E-33 T 13-09-2016 IPR029069 HotDog domain PMA3_RS22965 a7ff985cdd1954049858561f826fd70e 220 Pfam PF03995 Peptidase inhibitor family I36 89 150 9.7E-9 T 13-09-2016 PMA3_RS00710 f89426a7cb50fba66ded9d2c45fb3fcd 251 PANTHER PTHR24220:SF327 3 248 2.8E-136 T 13-09-2016 PMA3_RS00710 f89426a7cb50fba66ded9d2c45fb3fcd 251 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS00710 f89426a7cb50fba66ded9d2c45fb3fcd 251 SUPERFAMILY SSF52540 1 241 1.98E-76 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS00710 f89426a7cb50fba66ded9d2c45fb3fcd 251 SMART SM00382 26 219 1.5E-18 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS00710 f89426a7cb50fba66ded9d2c45fb3fcd 251 Pfam PF00005 ABC transporter 17 171 8.1E-33 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS00710 f89426a7cb50fba66ded9d2c45fb3fcd 251 PANTHER PTHR24220 3 248 2.8E-136 T 13-09-2016 PMA3_RS00710 f89426a7cb50fba66ded9d2c45fb3fcd 251 PIRSF PIRSF039085 1 247 7.8E-111 T 13-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PMA3_RS00710 f89426a7cb50fba66ded9d2c45fb3fcd 251 Gene3D G3DSA:3.40.50.300 1 243 5.0E-82 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS10695 7a5ddc66013403649473bfda9fc05753 261 PANTHER PTHR19372:SF9 5 259 1.1E-104 T 13-09-2016 PMA3_RS10695 7a5ddc66013403649473bfda9fc05753 261 Gene3D G3DSA:3.90.420.10 102 259 5.6E-53 T 13-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PMA3_RS10695 7a5ddc66013403649473bfda9fc05753 261 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 250 1.1E-32 T 13-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PMA3_RS10695 7a5ddc66013403649473bfda9fc05753 261 PANTHER PTHR19372 5 259 1.1E-104 T 13-09-2016 PMA3_RS10695 7a5ddc66013403649473bfda9fc05753 261 SUPERFAMILY SSF56524 56 260 3.01E-64 T 13-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PMA3_RS23425 d49b637d5476b577f4cc08df5a928d24 387 Pfam PF14258 Domain of unknown function (DUF4350) 44 112 3.8E-9 T 13-09-2016 IPR025646 Domain of unknown function DUF4350 PMA3_RS14695 499308ab28b457f2ea5e1cca46ecc2a7 173 SUPERFAMILY SSF51182 9 172 3.26E-52 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS14695 499308ab28b457f2ea5e1cca46ecc2a7 173 PANTHER PTHR33387 1 173 2.5E-54 T 13-09-2016 PMA3_RS14695 499308ab28b457f2ea5e1cca46ecc2a7 173 Pfam PF06172 Cupin superfamily (DUF985) 14 150 1.3E-41 T 13-09-2016 IPR009327 Cupin domain of unknown function DUF985 PMA3_RS14695 499308ab28b457f2ea5e1cca46ecc2a7 173 PANTHER PTHR33387:SF3 1 173 2.5E-54 T 13-09-2016 PMA3_RS14695 499308ab28b457f2ea5e1cca46ecc2a7 173 Gene3D G3DSA:2.60.120.10 3 172 6.6E-59 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS11885 54ad123a08371cd0392dcfe43528d5aa 346 SUPERFAMILY SSF50022 11 129 3.4E-30 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS11885 54ad123a08371cd0392dcfe43528d5aa 346 PANTHER PTHR21266:SF31 17 339 1.2E-68 T 13-09-2016 PMA3_RS11885 54ad123a08371cd0392dcfe43528d5aa 346 Gene3D G3DSA:2.102.10.10 20 135 3.4E-30 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS11885 54ad123a08371cd0392dcfe43528d5aa 346 PANTHER PTHR21266 17 339 1.2E-68 T 13-09-2016 PMA3_RS11885 54ad123a08371cd0392dcfe43528d5aa 346 SUPERFAMILY SSF55961 120 327 5.91E-22 T 13-09-2016 PMA3_RS11885 54ad123a08371cd0392dcfe43528d5aa 346 Pfam PF00355 Rieske [2Fe-2S] domain 22 104 1.9E-17 T 13-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PMA3_RS12720 ed61e65d6092d98a3faf8ba7adb5c34f 309 Pfam PF02535 ZIP Zinc transporter 154 304 2.1E-25 T 13-09-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PMA3_RS12720 ed61e65d6092d98a3faf8ba7adb5c34f 309 PANTHER PTHR11040 18 25 1.6E-63 T 13-09-2016 PMA3_RS12720 ed61e65d6092d98a3faf8ba7adb5c34f 309 PANTHER PTHR11040 47 309 1.6E-63 T 13-09-2016 PMA3_RS12720 ed61e65d6092d98a3faf8ba7adb5c34f 309 PANTHER PTHR11040:SF33 18 25 1.6E-63 T 13-09-2016 PMA3_RS12720 ed61e65d6092d98a3faf8ba7adb5c34f 309 PANTHER PTHR11040:SF33 47 309 1.6E-63 T 13-09-2016 PMA3_RS26225 ab4535ca88cd9660b86f33a332ad7117 135 Gene3D G3DSA:3.90.1590.10 12 110 3.5E-18 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS26225 ab4535ca88cd9660b86f33a332ad7117 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 113 3.6E-8 T 13-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PMA3_RS26225 ab4535ca88cd9660b86f33a332ad7117 135 PANTHER PTHR28620 14 135 3.0E-32 T 13-09-2016 PMA3_RS26225 ab4535ca88cd9660b86f33a332ad7117 135 SUPERFAMILY SSF51316 10 118 1.88E-28 T 13-09-2016 IPR011057 Mss4-like PMA3_RS24150 60706a2c96799b45529f74d5e43b8c66 66 Pfam PF11759 Keratin-associated matrix 26 56 2.1E-4 T 13-09-2016 IPR021743 Keratin-associated protein, type6/8/16/19/20/21 PMA3_RS18760 fcd968587cf5b36a0bbb50d79f1ceaec 413 PANTHER PTHR34596 1 413 8.5E-151 T 13-09-2016 PMA3_RS18760 fcd968587cf5b36a0bbb50d79f1ceaec 413 Gene3D G3DSA:2.40.160.10 30 413 1.7E-135 T 13-09-2016 IPR023614 Porin domain PMA3_RS18760 fcd968587cf5b36a0bbb50d79f1ceaec 413 Pfam PF03573 outer membrane porin, OprD family 26 412 5.7E-140 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS03645 8e4f51e869698d7e5d981bf211ef805b 767 PANTHER PTHR30462 1 765 3.3E-266 T 13-09-2016 PMA3_RS03645 8e4f51e869698d7e5d981bf211ef805b 767 PANTHER PTHR30462:SF0 1 765 3.3E-266 T 13-09-2016 PMA3_RS03645 8e4f51e869698d7e5d981bf211ef805b 767 Pfam PF02470 MlaD protein 520 608 8.8E-11 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS03645 8e4f51e869698d7e5d981bf211ef805b 767 Pfam PF02470 MlaD protein 280 371 4.6E-11 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS03645 8e4f51e869698d7e5d981bf211ef805b 767 Pfam PF02470 MlaD protein 398 457 1.4E-7 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS03645 8e4f51e869698d7e5d981bf211ef805b 767 Pfam PF02470 MlaD protein 638 694 2.0E-7 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS03645 8e4f51e869698d7e5d981bf211ef805b 767 Pfam PF02470 MlaD protein 157 217 1.5E-8 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS03645 8e4f51e869698d7e5d981bf211ef805b 767 Pfam PF02470 MlaD protein 41 134 3.1E-11 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS00565 2762ced9377937fc04be9c310c53230e 60 Pfam PF10055 Uncharacterized small protein (DUF2292) 17 52 2.0E-16 T 13-09-2016 IPR018743 Protein of unknown function DUF2292 PMA3_RS03025 21a93637f088e01b2070d197a3c1e0af 55 Pfam PF10617 Protein of unknown function (DUF2474) 16 54 5.1E-20 T 13-09-2016 IPR018895 Protein of unknown function DUF2474 PMA3_RS23515 41259a1904827936688fa37929e8db61 282 PANTHER PTHR30193 26 277 2.1E-51 T 13-09-2016 PMA3_RS23515 41259a1904827936688fa37929e8db61 282 SUPERFAMILY SSF161098 20 278 6.73E-53 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23515 41259a1904827936688fa37929e8db61 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 270 6.1E-16 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23515 41259a1904827936688fa37929e8db61 282 Gene3D G3DSA:1.10.3720.10 19 275 2.1E-48 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS23515 41259a1904827936688fa37929e8db61 282 PANTHER PTHR30193:SF20 26 277 2.1E-51 T 13-09-2016 PMA3_RS23240 38b85b02258ca5f649c9b3f5301d9796 366 TIGRFAM TIGR02794 tolA_full: protein TolA 15 361 2.5E-58 T 13-09-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 PMA3_RS23240 38b85b02258ca5f649c9b3f5301d9796 366 SUPERFAMILY SSF74653 249 363 8.24E-21 T 13-09-2016 PMA3_RS23240 38b85b02258ca5f649c9b3f5301d9796 366 Gene3D G3DSA:3.30.1150.10 246 364 1.0E-30 T 13-09-2016 PMA3_RS23240 38b85b02258ca5f649c9b3f5301d9796 366 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 288 359 2.8E-11 T 13-09-2016 IPR006260 TonB, C-terminal GO:0006810 PMA3_RS23240 38b85b02258ca5f649c9b3f5301d9796 366 Pfam PF13103 TonB C terminal 278 342 3.1E-9 T 13-09-2016 IPR006260 TonB, C-terminal GO:0006810 PMA3_RS10680 ec7d1e8ce028396885f6fe6ff31661e7 226 Gene3D G3DSA:3.40.630.30 52 153 4.3E-13 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS10680 ec7d1e8ce028396885f6fe6ff31661e7 226 Pfam PF13508 Acetyltransferase (GNAT) domain 70 147 2.7E-9 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS10680 ec7d1e8ce028396885f6fe6ff31661e7 226 SUPERFAMILY SSF55729 66 159 2.74E-15 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS23310 f9ffac21f621a3d699b6ec36ab13532f 442 Gene3D G3DSA:2.40.160.10 40 442 1.6E-148 T 13-09-2016 IPR023614 Porin domain PMA3_RS23310 f9ffac21f621a3d699b6ec36ab13532f 442 Pfam PF03573 outer membrane porin, OprD family 35 440 8.5E-150 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS23310 f9ffac21f621a3d699b6ec36ab13532f 442 PANTHER PTHR34596 6 442 3.3E-164 T 13-09-2016 PMA3_RS04110 a6883ef36f51decf6e3f7841c37a96a1 97 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 13 95 1.5E-25 T 13-09-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PMA3_RS04110 a6883ef36f51decf6e3f7841c37a96a1 97 PANTHER PTHR37479:SF1 1 97 4.0E-33 T 13-09-2016 PMA3_RS04110 a6883ef36f51decf6e3f7841c37a96a1 97 Hamap MF_00910 Cell division protein FtsL [ftsL]. 12 95 15.024 T 13-09-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PMA3_RS04110 a6883ef36f51decf6e3f7841c37a96a1 97 PANTHER PTHR37479 1 97 4.0E-33 T 13-09-2016 PMA3_RS04110 a6883ef36f51decf6e3f7841c37a96a1 97 Pfam PF04999 Cell division protein FtsL 3 96 3.0E-32 T 13-09-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PMA3_RS17785 0165a06ba1b0f27125b463d18f1b8ab3 452 PANTHER PTHR11206 6 450 9.1E-124 T 13-09-2016 PMA3_RS17785 0165a06ba1b0f27125b463d18f1b8ab3 452 PIRSF PIRSF006603 1 451 2.6E-91 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS17785 0165a06ba1b0f27125b463d18f1b8ab3 452 PANTHER PTHR11206:SF107 6 450 9.1E-124 T 13-09-2016 PMA3_RS17785 0165a06ba1b0f27125b463d18f1b8ab3 452 Pfam PF01554 MatE 20 179 2.7E-29 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS17785 0165a06ba1b0f27125b463d18f1b8ab3 452 Pfam PF01554 MatE 249 409 1.4E-29 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS17785 0165a06ba1b0f27125b463d18f1b8ab3 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 421 5.3E-65 T 13-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PMA3_RS25860 7889b64c0bcb69b9cb10bda00f3f2898 191 Pfam PF02525 Flavodoxin-like fold 3 178 2.2E-38 T 13-09-2016 IPR003680 Flavodoxin-like fold PMA3_RS25860 7889b64c0bcb69b9cb10bda00f3f2898 191 PANTHER PTHR10204:SF40 2 191 4.6E-57 T 13-09-2016 PMA3_RS25860 7889b64c0bcb69b9cb10bda00f3f2898 191 SUPERFAMILY SSF52218 3 189 6.01E-55 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS25860 7889b64c0bcb69b9cb10bda00f3f2898 191 Gene3D G3DSA:3.40.50.360 3 189 1.2E-46 T 13-09-2016 IPR029039 Flavoprotein-like domain PMA3_RS25860 7889b64c0bcb69b9cb10bda00f3f2898 191 PANTHER PTHR10204 2 191 4.6E-57 T 13-09-2016 PMA3_RS15820 a6f44f3b2167a5a15e9b61008d5b19a6 213 Pfam PF07077 Protein of unknown function (DUF1345) 33 202 1.6E-55 T 13-09-2016 IPR009781 Protein of unknown function DUF1345 PMA3_RS19345 e7b9997e90360a9695b64616907762e7 282 SUPERFAMILY SSF53850 21 277 1.5E-68 T 13-09-2016 PMA3_RS19345 e7b9997e90360a9695b64616907762e7 282 Gene3D G3DSA:3.40.190.100 110 230 2.4E-33 T 13-09-2016 PMA3_RS19345 e7b9997e90360a9695b64616907762e7 282 PANTHER PTHR30177:SF0 8 273 1.2E-43 T 13-09-2016 PMA3_RS19345 e7b9997e90360a9695b64616907762e7 282 PANTHER PTHR30177 8 273 1.2E-43 T 13-09-2016 PMA3_RS19345 e7b9997e90360a9695b64616907762e7 282 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 267 4.5E-60 T 13-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PMA3_RS19345 e7b9997e90360a9695b64616907762e7 282 Gene3D G3DSA:3.40.190.10 23 104 7.1E-15 T 13-09-2016 PMA3_RS22645 079a5b3adb81c1d31055e6e2dcd30f7a 592 PANTHER PTHR11895 1 457 3.8E-156 T 13-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS22645 079a5b3adb81c1d31055e6e2dcd30f7a 592 SUPERFAMILY SSF75304 4 449 1.22E-106 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS22645 079a5b3adb81c1d31055e6e2dcd30f7a 592 Gene3D G3DSA:3.90.1300.10 4 459 3.3E-102 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS22645 079a5b3adb81c1d31055e6e2dcd30f7a 592 PANTHER PTHR11895:SF24 1 457 3.8E-156 T 13-09-2016 PMA3_RS22645 079a5b3adb81c1d31055e6e2dcd30f7a 592 Pfam PF01425 Amidase 25 440 4.5E-73 T 13-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PMA3_RS22645 079a5b3adb81c1d31055e6e2dcd30f7a 592 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 40 588 1.4E-236 T 13-09-2016 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 PMA3_RS18400 60525f635b887e0c6202061e6c02e6b1 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 66 81 1.1E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18400 60525f635b887e0c6202061e6c02e6b1 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 1.1E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18400 60525f635b887e0c6202061e6c02e6b1 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 1.1E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18400 60525f635b887e0c6202061e6c02e6b1 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 232 246 1.1E-9 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18400 60525f635b887e0c6202061e6c02e6b1 287 Pfam PF00561 alpha/beta hydrolase fold 41 273 3.4E-20 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS18400 60525f635b887e0c6202061e6c02e6b1 287 SUPERFAMILY SSF53474 15 287 2.68E-57 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18400 60525f635b887e0c6202061e6c02e6b1 287 Gene3D G3DSA:3.40.50.1820 19 287 2.8E-53 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS18400 60525f635b887e0c6202061e6c02e6b1 287 PANTHER PTHR10992 17 287 2.0E-41 T 13-09-2016 PMA3_RS06615 06d0dee370e09c62a5737e75d8b0ac02 426 Gene3D G3DSA:1.10.443.10 188 394 1.2E-10 T 13-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PMA3_RS06615 06d0dee370e09c62a5737e75d8b0ac02 426 SUPERFAMILY SSF56349 165 393 3.53E-9 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS06615 06d0dee370e09c62a5737e75d8b0ac02 426 SUPERFAMILY SSF56349 83 133 3.53E-9 T 13-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PMA3_RS05125 a9a1d7bc472fcc12e7370445e3c5a22d 117 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 18 96 6.5E-19 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS05125 a9a1d7bc472fcc12e7370445e3c5a22d 117 SUPERFAMILY SSF46767 18 97 1.7E-20 T 13-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PMA3_RS05125 a9a1d7bc472fcc12e7370445e3c5a22d 117 Gene3D G3DSA:1.10.10.10 17 100 5.0E-18 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS05125 a9a1d7bc472fcc12e7370445e3c5a22d 117 PANTHER PTHR10815:SF2 16 112 5.9E-29 T 13-09-2016 PMA3_RS05125 a9a1d7bc472fcc12e7370445e3c5a22d 117 PANTHER PTHR10815 16 112 5.9E-29 T 13-09-2016 PMA3_RS17020 6cdf8b3a3104d73cb9a0b65c8259248b 210 SUPERFAMILY SSF50969 15 208 1.57E-25 T 13-09-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PMA3_RS17020 6cdf8b3a3104d73cb9a0b65c8259248b 210 Gene3D G3DSA:2.130.10.10 17 207 1.5E-18 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS17020 6cdf8b3a3104d73cb9a0b65c8259248b 210 Pfam PF13360 PQQ-like domain 74 203 1.2E-5 T 13-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 PANTHER PTHR23508 17 341 1.7E-229 T 13-09-2016 PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 PANTHER PTHR23508:SF7 17 341 1.7E-229 T 13-09-2016 PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 Gene3D G3DSA:1.20.1250.20 21 228 1.8E-22 T 13-09-2016 PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 Gene3D G3DSA:1.20.1250.20 438 533 7.2E-25 T 13-09-2016 PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 Gene3D G3DSA:1.20.1250.20 251 339 7.2E-25 T 13-09-2016 PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 PANTHER PTHR23508:SF7 440 538 1.7E-229 T 13-09-2016 PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 Pfam PF00083 Sugar (and other) transporter 25 229 4.3E-28 T 13-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 SUPERFAMILY SSF103473 442 537 1.57E-61 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 SUPERFAMILY SSF103473 21 343 1.57E-61 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS12960 84fe6fe27d1dc5808d6664f5863b6c94 540 PANTHER PTHR23508 440 538 1.7E-229 T 13-09-2016 PMA3_RS12040 bcf34ac28ad8a204aa6b777e7459f161 282 SMART SM00382 39 229 8.2E-18 T 13-09-2016 IPR003593 AAA+ ATPase domain PMA3_RS12040 bcf34ac28ad8a204aa6b777e7459f161 282 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PMA3_RS12040 bcf34ac28ad8a204aa6b777e7459f161 282 PANTHER PTHR24220:SF10 12 234 4.6E-94 T 13-09-2016 PMA3_RS12040 bcf34ac28ad8a204aa6b777e7459f161 282 SUPERFAMILY SSF52540 11 237 7.34E-71 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS12040 bcf34ac28ad8a204aa6b777e7459f161 282 PANTHER PTHR24220 12 234 4.6E-94 T 13-09-2016 PMA3_RS12040 bcf34ac28ad8a204aa6b777e7459f161 282 Pfam PF00005 ABC transporter 31 169 3.8E-31 T 13-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PMA3_RS12040 bcf34ac28ad8a204aa6b777e7459f161 282 Gene3D G3DSA:3.40.50.300 5 226 1.6E-66 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS02550 42d15cd9a9aa1bbfd006c20fc581b92f 405 Pfam PF11906 Protein of unknown function (DUF3426) 256 401 1.0E-36 T 13-09-2016 IPR021834 Protein of unknown function DUF3426 PMA3_RS02550 42d15cd9a9aa1bbfd006c20fc581b92f 405 Pfam PF13719 zinc-ribbon domain 6 41 2.6E-9 T 13-09-2016 IPR011723 Zinc finger/thioredoxin putative PMA3_RS02550 42d15cd9a9aa1bbfd006c20fc581b92f 405 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 41 1.1E-16 T 13-09-2016 IPR011723 Zinc finger/thioredoxin putative PMA3_RS03395 fdf42bdb341700b7be55e825f187736d 207 PANTHER PTHR10695 9 200 3.5E-65 T 13-09-2016 PMA3_RS03395 fdf42bdb341700b7be55e825f187736d 207 Gene3D G3DSA:3.40.50.300 5 200 1.4E-67 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03395 fdf42bdb341700b7be55e825f187736d 207 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 10 193 1.1E-53 T 13-09-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PMA3_RS03395 fdf42bdb341700b7be55e825f187736d 207 Pfam PF01121 Dephospho-CoA kinase 9 184 1.8E-68 T 13-09-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PMA3_RS03395 fdf42bdb341700b7be55e825f187736d 207 SUPERFAMILY SSF52540 7 200 2.34E-36 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS03395 fdf42bdb341700b7be55e825f187736d 207 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 8 202 26.605 T 13-09-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PMA3_RS22930 bf8708b34f9cdf45c50eb0227581ce37 220 PANTHER PTHR30086 1 209 3.4E-25 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS22930 bf8708b34f9cdf45c50eb0227581ce37 220 Pfam PF01810 LysE type translocator 11 203 2.6E-26 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS02595 7e2169484d4924bc9a2b9922e8177883 186 PIRSF PIRSF017340 12 183 7.7E-74 T 13-09-2016 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 PMA3_RS02595 7e2169484d4924bc9a2b9922e8177883 186 PANTHER PTHR22769:SF25 20 174 3.0E-29 T 13-09-2016 PMA3_RS02595 7e2169484d4924bc9a2b9922e8177883 186 Gene3D G3DSA:3.90.79.10 15 179 2.0E-49 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS02595 7e2169484d4924bc9a2b9922e8177883 186 PANTHER PTHR22769 20 174 3.0E-29 T 13-09-2016 PMA3_RS02595 7e2169484d4924bc9a2b9922e8177883 186 SUPERFAMILY SSF55811 21 179 3.79E-34 T 13-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PMA3_RS02595 7e2169484d4924bc9a2b9922e8177883 186 Pfam PF00293 NUDIX domain 49 159 3.4E-16 T 13-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PMA3_RS08445 9613e0bcf427410b78839c771c0ed79a 243 Pfam PF06251 Capsule biosynthesis GfcC 21 234 5.9E-32 T 13-09-2016 IPR010425 Domain of unknown function DUF1017 PMA3_RS21035 9c9e1dc86c3c478af844841119afc4c6 492 Pfam PF02646 RmuC family 174 470 5.3E-106 T 13-09-2016 IPR003798 DNA recombination RmuC PMA3_RS21035 9c9e1dc86c3c478af844841119afc4c6 492 PANTHER PTHR30563 19 485 1.2E-123 T 13-09-2016 PMA3_RS00230 702fc69e08a4a3170319eaa6c1d47136 106 Pfam PF09498 Protein of unknown function (DUF2388) 37 105 1.3E-29 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS00230 702fc69e08a4a3170319eaa6c1d47136 106 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 105 1.9E-32 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS10420 f6d6a909ed8526d96cefe00655865f56 452 Pfam PF07044 Protein of unknown function (DUF1329) 84 445 2.8E-129 T 13-09-2016 IPR010752 Protein of unknown function DUF1329 PMA3_RS10420 f6d6a909ed8526d96cefe00655865f56 452 Gene3D G3DSA:2.50.20.10 159 308 7.9E-32 T 13-09-2016 PMA3_RS10420 f6d6a909ed8526d96cefe00655865f56 452 Gene3D G3DSA:2.50.20.10 340 392 7.9E-32 T 13-09-2016 PMA3_RS18165 28c48f0d1f021ae3f7f31747db87827b 272 PANTHER PTHR28047:SF1 72 247 5.2E-19 T 13-09-2016 PMA3_RS18165 28c48f0d1f021ae3f7f31747db87827b 272 PANTHER PTHR28047 72 247 5.2E-19 T 13-09-2016 PMA3_RS13310 fa7bb1d48d8717b0ab1d0333d6809985 221 Pfam PF08787 Alginate lyase 2 218 1.3E-54 T 13-09-2016 IPR014895 Alginate lyase 2 PMA3_RS13310 fa7bb1d48d8717b0ab1d0333d6809985 221 Gene3D G3DSA:2.60.120.200 1 219 4.0E-60 T 13-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PMA3_RS13310 fa7bb1d48d8717b0ab1d0333d6809985 221 SUPERFAMILY SSF49899 2 218 1.98E-65 T 13-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PMA3_RS22395 a52a1e214f9a7c027b0689b6db5e3d94 121 PANTHER PTHR37950 2 116 4.2E-23 T 13-09-2016 PMA3_RS22395 a52a1e214f9a7c027b0689b6db5e3d94 121 PANTHER PTHR37950:SF1 2 116 4.2E-23 T 13-09-2016 PMA3_RS22395 a52a1e214f9a7c027b0689b6db5e3d94 121 Gene3D G3DSA:3.30.429.10 1 119 3.4E-35 T 13-09-2016 PMA3_RS22395 a52a1e214f9a7c027b0689b6db5e3d94 121 SUPERFAMILY SSF55331 2 119 6.02E-28 T 13-09-2016 IPR014347 Tautomerase/MIF superfamily PMA3_RS22395 a52a1e214f9a7c027b0689b6db5e3d94 121 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 3.8E-13 T 13-09-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 PMA3_RS06435 50c0f26e673787b33764b5dc750de246 146 PANTHER PTHR13887:SF26 16 91 2.3E-18 T 13-09-2016 PMA3_RS06435 50c0f26e673787b33764b5dc750de246 146 Pfam PF02600 Disulfide bond formation protein DsbB 13 139 2.6E-7 T 13-09-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PMA3_RS06435 50c0f26e673787b33764b5dc750de246 146 PIRSF PIRSF036659 6 146 5.2E-43 T 13-09-2016 IPR012187 Disulphide bond formation protein BdbC PMA3_RS06435 50c0f26e673787b33764b5dc750de246 146 Gene3D G3DSA:1.20.1550.10 7 107 1.3E-8 T 13-09-2016 IPR023380 Disulphide bond formation protein DsbB-like domain PMA3_RS06435 50c0f26e673787b33764b5dc750de246 146 PANTHER PTHR13887 16 91 2.3E-18 T 13-09-2016 PMA3_RS06435 50c0f26e673787b33764b5dc750de246 146 SUPERFAMILY SSF158442 16 140 8.63E-25 T 13-09-2016 PMA3_RS10610 135645974a96503902ab61f10b9764a9 178 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 9 154 1.5E-22 T 13-09-2016 IPR017734 Type VI secretion system, lipoprotein SciN PMA3_RS10610 135645974a96503902ab61f10b9764a9 178 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 18 167 4.4E-32 T 13-09-2016 IPR017734 Type VI secretion system, lipoprotein SciN PMA3_RS10610 135645974a96503902ab61f10b9764a9 178 PANTHER PTHR37625:SF1 1 177 5.9E-42 T 13-09-2016 PMA3_RS10610 135645974a96503902ab61f10b9764a9 178 PANTHER PTHR37625 1 177 5.9E-42 T 13-09-2016 PMA3_RS01035 09a4a44721b04002ceb76a3386bb516b 359 PANTHER PTHR30547 2 345 5.3E-124 T 13-09-2016 PMA3_RS01035 09a4a44721b04002ceb76a3386bb516b 359 Pfam PF06250 Protein of unknown function (DUF1016) 20 335 1.4E-116 T 13-09-2016 IPR009362 Protein of unknown function DUF1016 PMA3_RS01035 09a4a44721b04002ceb76a3386bb516b 359 PANTHER PTHR30547:SF5 2 345 5.3E-124 T 13-09-2016 PMA3_RS17700 137df863ba720440f5f5bc321c89ff0e 208 PANTHER PTHR14119:SF11 1 203 3.9E-113 T 13-09-2016 PMA3_RS17700 137df863ba720440f5f5bc321c89ff0e 208 Pfam PF00857 Isochorismatase family 16 165 7.7E-22 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS17700 137df863ba720440f5f5bc321c89ff0e 208 Gene3D G3DSA:3.40.50.850 7 203 3.4E-47 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS17700 137df863ba720440f5f5bc321c89ff0e 208 SUPERFAMILY SSF52499 5 202 1.26E-52 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS17700 137df863ba720440f5f5bc321c89ff0e 208 PANTHER PTHR14119 1 203 3.9E-113 T 13-09-2016 PMA3_RS26760 837b81234171c298acc1e0d3cea00188 322 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 318 1.3E-115 T 13-09-2016 IPR017686 Phage/plasmid-like protein PMA3_RS26760 837b81234171c298acc1e0d3cea00188 322 Pfam PF06067 Domain of unknown function (DUF932) 77 302 7.1E-78 T 13-09-2016 IPR026325 Protein of unknown function DUF932 PMA3_RS15185 14d6c1425a6c6b2cce674e5994feeb36 359 PANTHER PTHR22550:SF12 1 324 4.6E-139 T 13-09-2016 PMA3_RS15185 14d6c1425a6c6b2cce674e5994feeb36 359 SMART SM00327 89 289 1.2E-24 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15185 14d6c1425a6c6b2cce674e5994feeb36 359 PANTHER PTHR22550 1 324 4.6E-139 T 13-09-2016 PMA3_RS15185 14d6c1425a6c6b2cce674e5994feeb36 359 Gene3D G3DSA:3.40.50.410 89 284 3.1E-28 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15185 14d6c1425a6c6b2cce674e5994feeb36 359 Pfam PF00092 von Willebrand factor type A domain 91 282 1.6E-28 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15185 14d6c1425a6c6b2cce674e5994feeb36 359 SUPERFAMILY SSF53300 89 284 1.63E-37 T 13-09-2016 IPR002035 von Willebrand factor, type A PMA3_RS15330 c22caf7afe455ce7b36e7968e35f99dd 296 Hamap MF_00361 NAD kinase [nadK]. 5 287 34.369 T 13-09-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PMA3_RS15330 c22caf7afe455ce7b36e7968e35f99dd 296 PANTHER PTHR20275 4 291 2.9E-104 T 13-09-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PMA3_RS15330 c22caf7afe455ce7b36e7968e35f99dd 296 Gene3D G3DSA:3.40.50.10330 3 150 5.8E-41 T 13-09-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PMA3_RS15330 c22caf7afe455ce7b36e7968e35f99dd 296 SUPERFAMILY SSF111331 6 289 3.01E-90 T 13-09-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain PMA3_RS15330 c22caf7afe455ce7b36e7968e35f99dd 296 Pfam PF01513 ATP-NAD kinase 6 271 2.8E-69 T 13-09-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PMA3_RS15330 c22caf7afe455ce7b36e7968e35f99dd 296 Gene3D G3DSA:2.60.200.30 151 261 9.7E-45 T 13-09-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PMA3_RS00080 347261f7a9411cfef6a789b271c4c3f4 197 Gene3D G3DSA:3.40.30.10 123 192 2.4E-4 T 13-09-2016 IPR012336 Thioredoxin-like fold PMA3_RS06725 d6416677e29309b0ad2da1169d6e48fe 309 PRINTS PR00990 Ribokinase signature 219 230 7.1E-5 T 13-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PMA3_RS06725 d6416677e29309b0ad2da1169d6e48fe 309 PRINTS PR00990 Ribokinase signature 6 27 7.1E-5 T 13-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PMA3_RS06725 d6416677e29309b0ad2da1169d6e48fe 309 PRINTS PR00990 Ribokinase signature 103 116 7.1E-5 T 13-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PMA3_RS06725 d6416677e29309b0ad2da1169d6e48fe 309 PRINTS PR00990 Ribokinase signature 178 193 7.1E-5 T 13-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PMA3_RS06725 d6416677e29309b0ad2da1169d6e48fe 309 Pfam PF00294 pfkB family carbohydrate kinase 3 292 1.3E-47 T 13-09-2016 IPR011611 Carbohydrate kinase PfkB PMA3_RS06725 d6416677e29309b0ad2da1169d6e48fe 309 PANTHER PTHR10584 1 305 1.9E-51 T 13-09-2016 PMA3_RS06725 d6416677e29309b0ad2da1169d6e48fe 309 Gene3D G3DSA:3.40.1190.20 1 305 7.0E-65 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS06725 d6416677e29309b0ad2da1169d6e48fe 309 SUPERFAMILY SSF53613 1 293 1.11E-60 T 13-09-2016 IPR029056 Ribokinase-like PMA3_RS28775 e0e61d1daee8e0e7c45e399f96d501eb 141 Pfam PF10027 Predicted integral membrane protein (DUF2269) 6 140 2.3E-30 T 13-09-2016 IPR018729 Protein of unknown function DUF2269, transmembrane PMA3_RS13820 246f8fed07eca62800b1a0912eb8e8cd 203 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 4.8E-36 T 13-09-2016 IPR009698 Protein of unknown function DUF1282 PMA3_RS12310 851b45d4baf79cfce09d16d59206e4bd 282 PANTHER PTHR18966:SF191 27 267 1.4E-27 T 13-09-2016 PMA3_RS12310 851b45d4baf79cfce09d16d59206e4bd 282 SUPERFAMILY SSF53850 12 269 1.49E-55 T 13-09-2016 PMA3_RS12310 851b45d4baf79cfce09d16d59206e4bd 282 SMART SM00062 40 269 2.0E-52 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS12310 851b45d4baf79cfce09d16d59206e4bd 282 Gene3D G3DSA:3.40.190.10 225 270 2.4E-30 T 13-09-2016 PMA3_RS12310 851b45d4baf79cfce09d16d59206e4bd 282 Gene3D G3DSA:3.40.190.10 38 120 2.4E-30 T 13-09-2016 PMA3_RS12310 851b45d4baf79cfce09d16d59206e4bd 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 267 1.7E-48 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS12310 851b45d4baf79cfce09d16d59206e4bd 282 Gene3D G3DSA:3.40.190.10 121 217 1.2E-16 T 13-09-2016 PMA3_RS12310 851b45d4baf79cfce09d16d59206e4bd 282 PANTHER PTHR18966 27 267 1.4E-27 T 13-09-2016 PMA3_RS14830 ac3ccd6c55f2d915a42856066477bae3 368 Gene3D G3DSA:3.90.226.10 17 205 2.4E-56 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS14830 ac3ccd6c55f2d915a42856066477bae3 368 Pfam PF16113 Enoyl-CoA hydratase/isomerase 28 360 1.1E-119 T 13-09-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 PMA3_RS14830 ac3ccd6c55f2d915a42856066477bae3 368 Gene3D G3DSA:1.10.12.10 287 334 2.0E-5 T 13-09-2016 IPR014748 Crontonase, C-terminal PMA3_RS14830 ac3ccd6c55f2d915a42856066477bae3 368 PANTHER PTHR11941:SF53 5 201 6.8E-112 T 13-09-2016 PMA3_RS14830 ac3ccd6c55f2d915a42856066477bae3 368 PANTHER PTHR11941:SF53 266 343 6.8E-112 T 13-09-2016 PMA3_RS14830 ac3ccd6c55f2d915a42856066477bae3 368 SUPERFAMILY SSF52096 270 347 5.94E-69 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS14830 ac3ccd6c55f2d915a42856066477bae3 368 SUPERFAMILY SSF52096 17 201 5.94E-69 T 13-09-2016 IPR029045 ClpP/crotonase-like domain PMA3_RS14830 ac3ccd6c55f2d915a42856066477bae3 368 PANTHER PTHR11941 266 343 6.8E-112 T 13-09-2016 PMA3_RS14830 ac3ccd6c55f2d915a42856066477bae3 368 PANTHER PTHR11941 5 201 6.8E-112 T 13-09-2016 PMA3_RS08095 e310560b996e5a6aea191461f865b084 249 PANTHER PTHR30060 4 246 7.0E-95 T 13-09-2016 PMA3_RS08095 e310560b996e5a6aea191461f865b084 249 PANTHER PTHR30060:SF1 4 246 7.0E-95 T 13-09-2016 PMA3_RS08095 e310560b996e5a6aea191461f865b084 249 Pfam PF03741 Integral membrane protein TerC family 19 209 7.7E-52 T 13-09-2016 IPR005496 Integral membrane protein TerC GO:0016021 PMA3_RS20105 8b1ce332bab4ae4ddc64cefe4fca1f4b 137 Gene3D G3DSA:3.40.50.2300 5 63 2.1E-6 T 13-09-2016 PMA3_RS20105 8b1ce332bab4ae4ddc64cefe4fca1f4b 137 SUPERFAMILY SSF52172 6 59 2.34E-6 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.9E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.9E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.9E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.2E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.2E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.2E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.2E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.2E-25 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PANTHER PTHR24322 155 186 5.6E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PANTHER PTHR24322 11 139 5.6E-41 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PANTHER PTHR24322:SF418 155 186 5.6E-41 T 13-09-2016 PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PANTHER PTHR24322:SF418 11 139 5.6E-41 T 13-09-2016 PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 SUPERFAMILY SSF51735 6 227 5.09E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 Pfam PF00106 short chain dehydrogenase 8 196 2.4E-43 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 PIRSF PIRSF000126 1 263 8.8E-75 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS10725 3685e3b1f5044a78e43185643de3507c 263 Gene3D G3DSA:3.40.50.720 8 226 2.6E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS18920 73096339240c33ed4627b84ecf8b762b 73 Gene3D G3DSA:1.20.1250.20 2 68 3.0E-4 T 13-09-2016 PMA3_RS20870 247ed689d585c5791b3e1169c7dfc192 301 SUPERFAMILY SSF53448 4 242 1.37E-25 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS20870 247ed689d585c5791b3e1169c7dfc192 301 Gene3D G3DSA:3.90.550.10 7 204 8.3E-15 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS20870 247ed689d585c5791b3e1169c7dfc192 301 Pfam PF00535 Glycosyl transferase family 2 7 107 8.6E-10 T 13-09-2016 IPR001173 Glycosyltransferase 2-like PMA3_RS22565 b13ca404f623075aea813c1bac48813a 313 PANTHER PTHR22602:SF0 4 286 1.2E-50 T 13-09-2016 PMA3_RS22565 b13ca404f623075aea813c1bac48813a 313 Gene3D G3DSA:3.30.70.1400 14 98 4.0E-28 T 13-09-2016 PMA3_RS22565 b13ca404f623075aea813c1bac48813a 313 SUPERFAMILY SSF101790 228 306 3.4E-12 T 13-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PMA3_RS22565 b13ca404f623075aea813c1bac48813a 313 PANTHER PTHR22602 4 286 1.2E-50 T 13-09-2016 PMA3_RS22565 b13ca404f623075aea813c1bac48813a 313 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 170 235 1.8E-26 T 13-09-2016 IPR017703 YgfZ/GcvT conserved site PMA3_RS22565 b13ca404f623075aea813c1bac48813a 313 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 210 265 5.8E-5 T 13-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PMA3_RS22565 b13ca404f623075aea813c1bac48813a 313 SUPERFAMILY SSF103025 3 226 1.35E-52 T 13-09-2016 PMA3_RS14170 8b469e3814db903c31c3ac5ac4f5099f 634 Pfam PF06980 Protein of unknown function (DUF1302) 32 634 1.4E-132 T 13-09-2016 IPR010727 Protein of unknown function DUF1302 PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 181 3.9E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 246 266 3.9E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 44 61 3.9E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 210 3.9E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 229 3.9E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 130 3.9E-36 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 178 206 - T 13-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 49 281 5.3E-66 T 13-09-2016 PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PANTHER PTHR24322 47 175 1.8E-64 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PANTHER PTHR24322 191 223 1.8E-64 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 191 210 6.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 6.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 6.2E-9 T 13-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 SUPERFAMILY SSF51735 41 282 9.29E-86 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 Gene3D G3DSA:3.40.50.720 38 281 4.0E-88 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PANTHER PTHR24322:SF105 47 175 1.8E-64 T 13-09-2016 PMA3_RS13840 3101df0d30aac1c82a8462afe232d724 285 PANTHER PTHR24322:SF105 191 223 1.8E-64 T 13-09-2016 PMA3_RS03365 0262df38f9ff38784fae18a734bd6a46 422 Gene3D G3DSA:2.40.160.10 34 422 7.9E-145 T 13-09-2016 IPR023614 Porin domain PMA3_RS03365 0262df38f9ff38784fae18a734bd6a46 422 Pfam PF03573 outer membrane porin, OprD family 30 420 5.0E-151 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS03365 0262df38f9ff38784fae18a734bd6a46 422 PANTHER PTHR34596 1 422 1.8E-151 T 13-09-2016 PMA3_RS05775 30ccbb933dbbf620375ece645037a797 155 SUPERFAMILY SSF140566 1 128 8.63E-27 T 13-09-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PMA3_RS05775 30ccbb933dbbf620375ece645037a797 155 Gene3D G3DSA:1.20.58.300 1 128 1.0E-31 T 13-09-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PMA3_RS05775 30ccbb933dbbf620375ece645037a797 155 Pfam PF05130 FlgN protein 1 142 5.5E-24 T 13-09-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 SUPERFAMILY SSF64518 218 525 2.75E-82 T 13-09-2016 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 SUPERFAMILY SSF64518 1 188 2.75E-82 T 13-09-2016 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 7.5E-20 T 13-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 523 2.8E-75 T 13-09-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 PANTHER PTHR30244:SF5 384 523 5.3E-62 T 13-09-2016 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 PANTHER PTHR30244:SF5 1 185 5.3E-62 T 13-09-2016 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 Gene3D G3DSA:1.20.1330.10 430 483 5.4E-28 T 13-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 Gene3D G3DSA:1.20.1330.10 53 168 5.4E-28 T 13-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 PANTHER PTHR30244 384 523 5.3E-62 T 13-09-2016 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 PANTHER PTHR30244 1 185 5.3E-62 T 13-09-2016 PMA3_RS21785 065fcf189663f2197977fdd6b56975d3 525 Pfam PF00700 Bacterial flagellin C-terminal helical region 443 520 3.1E-6 T 13-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PMA3_RS19110 1e9bae13c2451cbac313906c1fb5e52d 457 PANTHER PTHR33408 1 448 1.2E-16 T 13-09-2016 PMA3_RS19110 1e9bae13c2451cbac313906c1fb5e52d 457 Pfam PF05598 Transposase domain (DUF772) 52 128 5.5E-26 T 13-09-2016 IPR008490 Transposase InsH, N-terminal PMA3_RS19110 1e9bae13c2451cbac313906c1fb5e52d 457 Pfam PF13751 Transposase DDE domain 320 445 4.0E-17 T 13-09-2016 IPR025668 Transposase DDE domain PMA3_RS19110 1e9bae13c2451cbac313906c1fb5e52d 457 PANTHER PTHR33408:SF2 1 448 1.2E-16 T 13-09-2016 PMA3_RS03405 b5881554ef133162be93d22087980f73 405 PANTHER PTHR30012:SF0 9 405 1.5E-162 T 13-09-2016 PMA3_RS03405 b5881554ef133162be93d22087980f73 405 PANTHER PTHR30012 9 405 1.5E-162 T 13-09-2016 PMA3_RS03405 b5881554ef133162be93d22087980f73 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 13-09-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 PMA3_RS03405 b5881554ef133162be93d22087980f73 405 Pfam PF00482 Type II secretion system (T2SS), protein F 276 397 7.6E-31 T 13-09-2016 IPR018076 Type II secretion system F domain PMA3_RS03405 b5881554ef133162be93d22087980f73 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 2.1E-33 T 13-09-2016 IPR018076 Type II secretion system F domain PMA3_RS03405 b5881554ef133162be93d22087980f73 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.2E-19 T 13-09-2016 IPR003004 GspF/PilC family PMA3_RS03405 b5881554ef133162be93d22087980f73 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.2E-19 T 13-09-2016 IPR003004 GspF/PilC family PMA3_RS03405 b5881554ef133162be93d22087980f73 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 2.2E-19 T 13-09-2016 IPR003004 GspF/PilC family PMA3_RS03405 b5881554ef133162be93d22087980f73 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 2.2E-19 T 13-09-2016 IPR003004 GspF/PilC family PMA3_RS07710 54045530bee335ae2df074f2d97adc8b 61 Pfam PF06568 Domain of unknown function (DUF1127) 14 46 5.5E-11 T 13-09-2016 IPR009506 Protein of unknown function DUF1127 PMA3_RS12810 68f2dd2fcaf7c556e71f23f031ece315 446 Pfam PF07690 Major Facilitator Superfamily 34 298 3.0E-28 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS12810 68f2dd2fcaf7c556e71f23f031ece315 446 PANTHER PTHR23508:SF17 21 445 1.1E-140 T 13-09-2016 PMA3_RS12810 68f2dd2fcaf7c556e71f23f031ece315 446 Gene3D G3DSA:1.20.1250.20 254 442 9.4E-26 T 13-09-2016 PMA3_RS12810 68f2dd2fcaf7c556e71f23f031ece315 446 Gene3D G3DSA:1.20.1250.20 26 234 2.2E-28 T 13-09-2016 PMA3_RS12810 68f2dd2fcaf7c556e71f23f031ece315 446 PANTHER PTHR23508 21 445 1.1E-140 T 13-09-2016 PMA3_RS12810 68f2dd2fcaf7c556e71f23f031ece315 446 SUPERFAMILY SSF103473 22 444 1.31E-73 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS12810 68f2dd2fcaf7c556e71f23f031ece315 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 312 329 - T 13-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PMA3_RS19515 e8d93c6525a8e71f441a395cb074c7a2 234 Pfam PF06912 Protein of unknown function (DUF1275) 29 217 4.5E-31 T 13-09-2016 IPR010699 Protein of unknown function DUF1275 PMA3_RS19515 e8d93c6525a8e71f441a395cb074c7a2 234 PANTHER PTHR37314:SF1 8 234 2.9E-57 T 13-09-2016 PMA3_RS19515 e8d93c6525a8e71f441a395cb074c7a2 234 PANTHER PTHR37314 8 234 2.9E-57 T 13-09-2016 PMA3_RS01850 8cf5dc49e165f88a508e3d8d13e5dabb 365 Pfam PF00534 Glycosyl transferases group 1 194 333 2.8E-24 T 13-09-2016 IPR001296 Glycosyl transferase, family 1 PMA3_RS01850 8cf5dc49e165f88a508e3d8d13e5dabb 365 PANTHER PTHR12526 108 332 7.6E-39 T 13-09-2016 PMA3_RS01850 8cf5dc49e165f88a508e3d8d13e5dabb 365 SUPERFAMILY SSF53756 67 351 8.37E-48 T 13-09-2016 PMA3_RS01850 8cf5dc49e165f88a508e3d8d13e5dabb 365 Gene3D G3DSA:3.40.50.2000 167 343 6.4E-27 T 13-09-2016 PMA3_RS18170 48ce1018538f52b0256c836a083a3d57 318 SUPERFAMILY SSF53686 5 312 2.49E-78 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS18170 48ce1018538f52b0256c836a083a3d57 318 PANTHER PTHR10314 3 317 7.6E-88 T 13-09-2016 PMA3_RS18170 48ce1018538f52b0256c836a083a3d57 318 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 28 305 1.9E-64 T 13-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PMA3_RS18170 48ce1018538f52b0256c836a083a3d57 318 Gene3D G3DSA:3.40.50.1100 72 311 8.2E-54 T 13-09-2016 PMA3_RS18170 48ce1018538f52b0256c836a083a3d57 318 PANTHER PTHR10314:SF17 3 317 7.6E-88 T 13-09-2016 PMA3_RS26655 10362c67f6c477db93dec281c1169d61 120 PANTHER PTHR33931:SF2 1 113 1.2E-33 T 13-09-2016 PMA3_RS26655 10362c67f6c477db93dec281c1169d61 120 PANTHER PTHR33931 1 113 1.2E-33 T 13-09-2016 PMA3_RS26655 10362c67f6c477db93dec281c1169d61 120 Pfam PF03788 LrgA family 13 106 3.2E-20 T 13-09-2016 IPR005538 LrgA/CidA family GO:0016021 PMA3_RS01570 b9e9ae0d4efdfb057832be41ea8d0445 198 SMART SM00530 13 69 0.0032 T 13-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PMA3_RS01570 b9e9ae0d4efdfb057832be41ea8d0445 198 Gene3D G3DSA:1.10.260.40 5 73 3.7E-12 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS01570 b9e9ae0d4efdfb057832be41ea8d0445 198 SUPERFAMILY SSF47413 5 70 1.15E-8 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS26625 004479888b1f0696505eb21f67667e9a 1092 Gene3D G3DSA:2.150.10.10 437 622 4.2E-10 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS26625 004479888b1f0696505eb21f67667e9a 1092 SUPERFAMILY SSF51120 573 630 1.57E-8 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS26625 004479888b1f0696505eb21f67667e9a 1092 SUPERFAMILY SSF51120 439 506 1.57E-8 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS24025 f42013e9fe2fcc0368af5ed1a40a0bd0 460 Pfam PF04966 Carbohydrate-selective porin, OprB family 88 460 6.3E-114 T 13-09-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PMA3_RS24025 f42013e9fe2fcc0368af5ed1a40a0bd0 460 PANTHER PTHR37944 37 460 1.3E-152 T 13-09-2016 PMA3_RS24025 f42013e9fe2fcc0368af5ed1a40a0bd0 460 PANTHER PTHR37944:SF1 37 460 1.3E-152 T 13-09-2016 PMA3_RS15685 aee2b8d210193de7c4867403792d0488 153 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 13 152 6.4E-64 T 13-09-2016 IPR030991 Cytochrome c-550 PedF PMA3_RS15685 aee2b8d210193de7c4867403792d0488 153 SUPERFAMILY SSF46626 7 148 3.25E-19 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS15685 aee2b8d210193de7c4867403792d0488 153 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 69 146 3.2E-13 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS15685 aee2b8d210193de7c4867403792d0488 153 Gene3D G3DSA:1.10.760.10 60 150 5.7E-20 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS03015 d0ba4cce83ede187c679d2afda5ed140 480 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 1.2E-169 T 13-09-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PMA3_RS03015 d0ba4cce83ede187c679d2afda5ed140 480 PIRSF PIRSF006446 2 462 3.8E-235 T 13-09-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PMA3_RS03015 d0ba4cce83ede187c679d2afda5ed140 480 PANTHER PTHR30365:SF8 1 456 4.7E-291 T 13-09-2016 PMA3_RS03015 d0ba4cce83ede187c679d2afda5ed140 480 PANTHER PTHR30365 1 456 4.7E-291 T 13-09-2016 PMA3_RS08860 781978112f67d3c8611e974e304825ed 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 251 9.9E-22 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS08860 781978112f67d3c8611e974e304825ed 264 PANTHER PTHR22748 4 258 4.6E-158 T 13-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PMA3_RS08860 781978112f67d3c8611e974e304825ed 264 SUPERFAMILY SSF56219 4 258 2.22E-79 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS08860 781978112f67d3c8611e974e304825ed 264 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 258 3.2E-70 T 13-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PMA3_RS08860 781978112f67d3c8611e974e304825ed 264 PANTHER PTHR22748:SF9 4 258 4.6E-158 T 13-09-2016 PMA3_RS08860 781978112f67d3c8611e974e304825ed 264 Gene3D G3DSA:3.60.10.10 4 258 8.9E-78 T 13-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase PMA3_RS08860 781978112f67d3c8611e974e304825ed 264 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 257 9.1E-70 T 13-09-2016 PMA3_RS27030 7343376ec630f358aa20e508281417a2 705 PANTHER PTHR30460 246 656 2.7E-96 T 13-09-2016 PMA3_RS27030 7343376ec630f358aa20e508281417a2 705 Pfam PF00924 Mechanosensitive ion channel 464 659 4.4E-34 T 13-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PMA3_RS27030 7343376ec630f358aa20e508281417a2 705 SUPERFAMILY SSF50182 507 570 1.14E-9 T 13-09-2016 IPR010920 LSM domain PMA3_RS27030 7343376ec630f358aa20e508281417a2 705 SUPERFAMILY SSF82861 422 505 5.1E-14 T 13-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PMA3_RS27030 7343376ec630f358aa20e508281417a2 705 Gene3D G3DSA:2.30.30.60 524 569 1.6E-8 T 13-09-2016 PMA3_RS27030 7343376ec630f358aa20e508281417a2 705 SUPERFAMILY SSF82689 572 660 1.83E-8 T 13-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PMA3_RS27030 7343376ec630f358aa20e508281417a2 705 PANTHER PTHR30460:SF0 246 656 2.7E-96 T 13-09-2016 PMA3_RS21435 a461e455caf77f3008a6e8143f4f375d 295 PIRSF PIRSF011468 9 295 7.9E-159 T 13-09-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 PMA3_RS21435 a461e455caf77f3008a6e8143f4f375d 295 Pfam PF06007 Phosphonate metabolism protein PhnJ 18 289 3.7E-146 T 13-09-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 PMA3_RS02905 32f49b9c120b08915aa38a8424844428 189 PANTHER PTHR13256 5 185 4.8E-51 T 13-09-2016 PMA3_RS02905 32f49b9c120b08915aa38a8424844428 189 SUPERFAMILY SSF55729 3 154 1.73E-37 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS02905 32f49b9c120b08915aa38a8424844428 189 PANTHER PTHR13256:SF19 5 185 4.8E-51 T 13-09-2016 PMA3_RS02905 32f49b9c120b08915aa38a8424844428 189 Gene3D G3DSA:3.40.630.30 2 185 9.2E-52 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS02905 32f49b9c120b08915aa38a8424844428 189 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 9.4E-30 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS19135 e1219bddd84e968ce2f6c1265eb0fc50 127 Gene3D G3DSA:3.10.180.10 4 123 1.3E-22 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS19135 e1219bddd84e968ce2f6c1265eb0fc50 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 119 5.6E-8 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS19135 e1219bddd84e968ce2f6c1265eb0fc50 127 PANTHER PTHR35006 1 124 7.9E-36 T 13-09-2016 PMA3_RS19135 e1219bddd84e968ce2f6c1265eb0fc50 127 SUPERFAMILY SSF54593 4 125 1.35E-20 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS09045 2e5df2c0d28113ed1a7eb13fc039f828 986 Gene3D G3DSA:1.25.40.10 556 615 9.1E-6 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS09045 2e5df2c0d28113ed1a7eb13fc039f828 986 Gene3D G3DSA:1.25.40.10 937 967 9.1E-6 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS09045 2e5df2c0d28113ed1a7eb13fc039f828 986 SUPERFAMILY SSF48452 554 614 1.71E-5 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS09045 2e5df2c0d28113ed1a7eb13fc039f828 986 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 170 241 3.7E-27 T 13-09-2016 IPR020012 Motility protein FimV, N-terminal PMA3_RS09045 2e5df2c0d28113ed1a7eb13fc039f828 986 Gene3D G3DSA:3.10.350.10 164 217 2.5E-4 T 13-09-2016 IPR018392 LysM domain PMA3_RS09045 2e5df2c0d28113ed1a7eb13fc039f828 986 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 942 985 1.8E-21 T 13-09-2016 IPR020011 Motility protein FimV, C-terminal PMA3_RS11265 2977729bd3bc3ac0fec53cd76c50d629 277 Gene3D G3DSA:3.40.50.1820 14 264 2.4E-64 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS11265 2977729bd3bc3ac0fec53cd76c50d629 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 8.5E-11 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS11265 2977729bd3bc3ac0fec53cd76c50d629 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 8.5E-11 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS11265 2977729bd3bc3ac0fec53cd76c50d629 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 8.5E-11 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS11265 2977729bd3bc3ac0fec53cd76c50d629 277 PANTHER PTHR10992 15 264 8.0E-55 T 13-09-2016 PMA3_RS11265 2977729bd3bc3ac0fec53cd76c50d629 277 Pfam PF00561 alpha/beta hydrolase fold 23 246 1.5E-26 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS11265 2977729bd3bc3ac0fec53cd76c50d629 277 PRINTS PR00412 Epoxide hydrolase signature 239 261 1.6E-6 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS11265 2977729bd3bc3ac0fec53cd76c50d629 277 PRINTS PR00412 Epoxide hydrolase signature 206 222 1.6E-6 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS11265 2977729bd3bc3ac0fec53cd76c50d629 277 PRINTS PR00412 Epoxide hydrolase signature 47 62 1.6E-6 T 13-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PMA3_RS11265 2977729bd3bc3ac0fec53cd76c50d629 277 SUPERFAMILY SSF53474 14 264 7.84E-63 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13320 2e745ecb7887aa0d4321df8f27dfd1b4 345 Gene3D G3DSA:3.40.50.1820 219 323 1.0E-34 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13320 2e745ecb7887aa0d4321df8f27dfd1b4 345 Gene3D G3DSA:3.40.50.1820 12 180 1.0E-34 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13320 2e745ecb7887aa0d4321df8f27dfd1b4 345 PIRSF PIRSF031982 6 337 9.1E-94 T 13-09-2016 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL PMA3_RS13320 2e745ecb7887aa0d4321df8f27dfd1b4 345 SUPERFAMILY SSF53474 13 180 4.89E-28 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS13320 2e745ecb7887aa0d4321df8f27dfd1b4 345 SUPERFAMILY SSF53474 219 301 4.89E-28 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS06000 d70bce86c97686ac5158916a1684a601 115 Pfam PF14333 Domain of unknown function (DUF4389) 11 85 1.4E-28 T 13-09-2016 IPR025498 Protein of unknown function DUF4389 PMA3_RS00250 3c2ad60399def7df16fea4f3f67e08f8 497 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 13 494 1.8E-230 T 13-09-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 PMA3_RS00250 3c2ad60399def7df16fea4f3f67e08f8 497 PANTHER PTHR21432 1 494 2.5E-268 T 13-09-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PMA3_RS00250 3c2ad60399def7df16fea4f3f67e08f8 497 Gene3D G3DSA:3.40.1080.10 12 220 4.1E-43 T 13-09-2016 PMA3_RS00250 3c2ad60399def7df16fea4f3f67e08f8 497 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 463 1.9E-40 T 13-09-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PMA3_RS00250 3c2ad60399def7df16fea4f3f67e08f8 497 Gene3D G3DSA:3.40.810.20 225 490 6.1E-80 T 13-09-2016 PMA3_RS00250 3c2ad60399def7df16fea4f3f67e08f8 497 PANTHER PTHR21432:SF10 1 494 2.5E-268 T 13-09-2016 PMA3_RS00250 3c2ad60399def7df16fea4f3f67e08f8 497 SUPERFAMILY SSF100950 3 222 4.95E-75 T 13-09-2016 PMA3_RS00250 3c2ad60399def7df16fea4f3f67e08f8 497 SUPERFAMILY SSF100950 225 494 1.67E-82 T 13-09-2016 PMA3_RS00250 3c2ad60399def7df16fea4f3f67e08f8 497 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 12 215 1.9E-29 T 13-09-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PMA3_RS29685 956d2cdf769910280d61cf73a2a3ecc0 303 Pfam PF00072 Response regulator receiver domain 6 119 1.2E-26 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS29685 956d2cdf769910280d61cf73a2a3ecc0 303 PANTHER PTHR26402 4 125 1.7E-37 T 13-09-2016 PMA3_RS29685 956d2cdf769910280d61cf73a2a3ecc0 303 SMART SM00448 4 119 5.9E-29 T 13-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PMA3_RS29685 956d2cdf769910280d61cf73a2a3ecc0 303 SUPERFAMILY SSF52172 1 129 4.98E-36 T 13-09-2016 IPR011006 CheY-like superfamily PMA3_RS29685 956d2cdf769910280d61cf73a2a3ecc0 303 Gene3D G3DSA:3.40.50.2300 2 130 2.4E-37 T 13-09-2016 PMA3_RS06835 1d522c6e64e7c654494ffcd9bf912b50 50 Pfam PF11752 Protein of unknown function (DUF3309) 2 50 2.1E-22 T 13-09-2016 IPR021738 Protein of unknown function DUF3309 PMA3_RS01855 fbb7c0eee6d3d8a5bde43c6b681a1b99 201 Gene3D G3DSA:1.10.510.10 118 185 1.1E-5 T 13-09-2016 PMA3_RS01855 fbb7c0eee6d3d8a5bde43c6b681a1b99 201 SUPERFAMILY SSF56112 25 176 1.71E-11 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS29690 962918becd968bc6770e72a9363768dd 253 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 224 6.2E-79 T 13-09-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PMA3_RS29690 962918becd968bc6770e72a9363768dd 253 PANTHER PTHR10010 7 231 1.1E-89 T 13-09-2016 PMA3_RS29690 962918becd968bc6770e72a9363768dd 253 Gene3D G3DSA:1.20.58.220 10 120 2.4E-37 T 13-09-2016 PMA3_RS29690 962918becd968bc6770e72a9363768dd 253 Gene3D G3DSA:1.20.58.220 129 238 4.2E-35 T 13-09-2016 PMA3_RS29690 962918becd968bc6770e72a9363768dd 253 PANTHER PTHR10010:SF14 7 231 1.1E-89 T 13-09-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PMA3_RS29690 962918becd968bc6770e72a9363768dd 253 SUPERFAMILY SSF109755 14 234 5.13E-73 T 13-09-2016 PMA3_RS29690 962918becd968bc6770e72a9363768dd 253 PIRSF PIRSF003107 8 229 1.8E-78 T 13-09-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PMA3_RS29690 962918becd968bc6770e72a9363768dd 253 Pfam PF01895 PhoU domain 27 113 1.3E-23 T 13-09-2016 IPR026022 PhoU domain PMA3_RS29690 962918becd968bc6770e72a9363768dd 253 Pfam PF01895 PhoU domain 131 214 1.2E-18 T 13-09-2016 IPR026022 PhoU domain PMA3_RS17550 77b29de0bf52a6f097d901bbe2a4a6e1 744 PANTHER PTHR15498:SF49 41 282 3.8E-29 T 13-09-2016 PMA3_RS17550 77b29de0bf52a6f097d901bbe2a4a6e1 744 PANTHER PTHR15498 41 282 3.8E-29 T 13-09-2016 PMA3_RS09495 d911b81a9588448f7c8ff2d82f80c28e 239 PANTHER PTHR30133 13 239 4.2E-71 T 13-09-2016 PMA3_RS09495 d911b81a9588448f7c8ff2d82f80c28e 239 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 18 123 4.1E-15 T 13-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PMA3_RS09495 d911b81a9588448f7c8ff2d82f80c28e 239 Gene3D G3DSA:1.10.3720.10 18 231 6.5E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09495 d911b81a9588448f7c8ff2d82f80c28e 239 SUPERFAMILY SSF161098 18 216 3.14E-36 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS09495 d911b81a9588448f7c8ff2d82f80c28e 239 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 228 2.6E-19 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS22440 bd328b2f999b3e86335d526ade84c564 270 Pfam PF07103 Protein of unknown function (DUF1365) 6 245 2.8E-65 T 13-09-2016 IPR010775 Protein of unknown function DUF1365 PMA3_RS22440 bd328b2f999b3e86335d526ade84c564 270 PANTHER PTHR33973 1 244 1.4E-54 T 13-09-2016 PMA3_RS19250 c50ad6936e418628d8842b8a56333ab6 240 Pfam PF10670 Domain of unknown function (DUF4198) 20 212 9.2E-16 T 13-09-2016 IPR019613 Protein of unknown function DUF4198 PMA3_RS08880 efb2d82ff279740626e2821c9f2c4fcf 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 261 1.3E-14 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS08880 efb2d82ff279740626e2821c9f2c4fcf 373 SUPERFAMILY SSF111369 52 261 1.14E-16 T 13-09-2016 PMA3_RS08880 efb2d82ff279740626e2821c9f2c4fcf 373 PANTHER PTHR30469 2 369 3.3E-46 T 13-09-2016 PMA3_RS08880 efb2d82ff279740626e2821c9f2c4fcf 373 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 358 8.2E-55 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS08880 efb2d82ff279740626e2821c9f2c4fcf 373 Gene3D G3DSA:2.40.50.100 169 200 9.2E-15 T 13-09-2016 PMA3_RS08880 efb2d82ff279740626e2821c9f2c4fcf 373 Gene3D G3DSA:2.40.50.100 65 94 9.2E-15 T 13-09-2016 PMA3_RS08480 77f90f6ec228b43d1931a79c29aa017c 372 Gene3D G3DSA:3.40.50.2000 186 357 1.3E-17 T 13-09-2016 PMA3_RS08480 77f90f6ec228b43d1931a79c29aa017c 372 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 210 362 5.5E-9 T 13-09-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PMA3_RS08480 77f90f6ec228b43d1931a79c29aa017c 372 SUPERFAMILY SSF53756 19 370 6.02E-11 T 13-09-2016 PMA3_RS08480 77f90f6ec228b43d1931a79c29aa017c 372 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 7 315 1.1E-98 T 13-09-2016 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase PMA3_RS21185 67f263b467e123d1fc6dcf953aa0df93 334 SUPERFAMILY SSF51556 28 330 7.66E-20 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS21185 67f263b467e123d1fc6dcf953aa0df93 334 Pfam PF04909 Amidohydrolase 28 325 3.8E-12 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS21185 67f263b467e123d1fc6dcf953aa0df93 334 Gene3D G3DSA:3.20.20.140 28 331 8.2E-28 T 13-09-2016 PMA3_RS26240 9cbfc1b9ab0638deb6ea78fd9a88fcb1 74 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 4 63 3.0E-15 T 13-09-2016 IPR018691 Protein of unknown function DUF2188 PMA3_RS26095 9cbfc1b9ab0638deb6ea78fd9a88fcb1 74 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 4 63 3.0E-15 T 13-09-2016 IPR018691 Protein of unknown function DUF2188 PMA3_RS26090 e7c707f184f5c2f332aef9c1e8c969ca 240 Pfam PF06884 Protein of unknown function (DUF1264) 46 210 3.1E-71 T 13-09-2016 IPR010686 Protein of unknown function DUF1264 PMA3_RS26090 e7c707f184f5c2f332aef9c1e8c969ca 240 PANTHER PTHR31360 7 232 4.9E-115 T 13-09-2016 PMA3_RS26090 e7c707f184f5c2f332aef9c1e8c969ca 240 PANTHER PTHR31360:SF3 7 232 4.9E-115 T 13-09-2016 PMA3_RS00820 561dfd402208a09574917be7f775be8b 135 SUPERFAMILY SSF55174 10 105 3.66E-26 T 13-09-2016 PMA3_RS00820 561dfd402208a09574917be7f775be8b 135 Gene3D G3DSA:3.10.290.10 9 105 1.0E-33 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS00820 561dfd402208a09574917be7f775be8b 135 PANTHER PTHR11079:SF70 4 104 4.1E-20 T 13-09-2016 PMA3_RS00820 561dfd402208a09574917be7f775be8b 135 PANTHER PTHR11079 4 104 4.1E-20 T 13-09-2016 PMA3_RS00820 561dfd402208a09574917be7f775be8b 135 Pfam PF01479 S4 domain 11 56 2.3E-9 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS00820 561dfd402208a09574917be7f775be8b 135 PIRSF PIRSF016821 8 134 3.2E-38 T 13-09-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 PMA3_RS00820 561dfd402208a09574917be7f775be8b 135 SMART SM00363 11 74 4.6E-7 T 13-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 PMA3_RS15675 75df9924a157ac6422a8cd77271fca8a 253 SUPERFAMILY SSF81296 167 252 4.34E-16 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS15675 75df9924a157ac6422a8cd77271fca8a 253 Pfam PF13501 Sulfur oxidation protein SoxY 39 145 1.0E-23 T 13-09-2016 IPR032711 Ig-like SoxY domain PMA3_RS15675 75df9924a157ac6422a8cd77271fca8a 253 Pfam PF08770 Sulphur oxidation protein SoxZ 171 251 1.3E-9 T 13-09-2016 IPR014880 Sulphur oxidation protein SoxZ PMA3_RS15675 75df9924a157ac6422a8cd77271fca8a 253 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 34 249 8.6E-60 T 13-09-2016 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier PMA3_RS15675 75df9924a157ac6422a8cd77271fca8a 253 Gene3D G3DSA:2.60.40.10 171 251 2.2E-11 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS16555 8b9c5c9790b9fe4a62e40f9559568887 117 PIRSF PIRSF007028 1 117 4.8E-52 T 13-09-2016 IPR009874 Protein of unknown function DUF1428 PMA3_RS16555 8b9c5c9790b9fe4a62e40f9559568887 117 SUPERFAMILY SSF54909 1 116 3.06E-52 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS16555 8b9c5c9790b9fe4a62e40f9559568887 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 4.9E-47 T 13-09-2016 IPR009874 Protein of unknown function DUF1428 PMA3_RS16555 8b9c5c9790b9fe4a62e40f9559568887 117 Gene3D G3DSA:3.30.70.900 1 116 1.1E-54 T 13-09-2016 PMA3_RS21880 c76026a9dd2f6eb0315fcb1078119d23 63 Pfam PF06945 Protein of unknown function (DUF1289) 7 50 3.7E-17 T 13-09-2016 IPR010710 Protein of unknown function DUF1289 PMA3_RS29535 59f8dfac6e86a1e981bc439f7ca197a0 402 PANTHER PTHR36178:SF1 1 402 1.5E-184 T 13-09-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PMA3_RS29535 59f8dfac6e86a1e981bc439f7ca197a0 402 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 397 1.1E-176 T 13-09-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PMA3_RS29535 59f8dfac6e86a1e981bc439f7ca197a0 402 PANTHER PTHR36178 1 402 1.5E-184 T 13-09-2016 PMA3_RS29535 59f8dfac6e86a1e981bc439f7ca197a0 402 Pfam PF03616 Sodium/glutamate symporter 3 366 1.4E-150 T 13-09-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PMA3_RS06905 578116976b11b502830afc62c821e428 173 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 91 148 6.8E-22 T 13-09-2016 IPR018637 Domain of unknown function DUF2059 PMA3_RS06745 42a49fb1f42df7ac41f6ae2a2850d0b5 330 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 317 2.8E-102 T 13-09-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130|UniPathway: UPA00081 PMA3_RS27105 09383d84782bbff8ebaeb60d946140ab 385 SUPERFAMILY SSF56059 6 169 3.04E-81 T 13-09-2016 PMA3_RS27105 09383d84782bbff8ebaeb60d946140ab 385 SUPERFAMILY SSF56059 264 381 3.04E-81 T 13-09-2016 PMA3_RS27105 09383d84782bbff8ebaeb60d946140ab 385 SUPERFAMILY SSF52440 171 276 4.89E-36 T 13-09-2016 IPR016185 Pre-ATP-grasp domain PMA3_RS27105 09383d84782bbff8ebaeb60d946140ab 385 PANTHER PTHR30094:SF5 9 385 8.4E-127 T 13-09-2016 PMA3_RS27105 09383d84782bbff8ebaeb60d946140ab 385 PANTHER PTHR30094 9 385 8.4E-127 T 13-09-2016 PMA3_RS27105 09383d84782bbff8ebaeb60d946140ab 385 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 383 5.7E-142 T 13-09-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain PMA3_RS20315 374f9712b53e8e688a3e37a5a56f6aa0 387 PIRSF PIRSF012641 23 385 2.7E-128 T 13-09-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase PMA3_RS20315 374f9712b53e8e688a3e37a5a56f6aa0 387 Pfam PF10005 zinc-ribbon domain 26 119 2.2E-27 T 13-09-2016 IPR011201 Zinc-ribbon domain, bacteria PMA3_RS20315 374f9712b53e8e688a3e37a5a56f6aa0 387 Pfam PF15887 Putative zinc-binding metallo-peptidase 123 372 5.1E-105 T 13-09-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase PMA3_RS29955 43685653c104f758c70b88881284b925 213 PANTHER PTHR30086 4 209 3.6E-73 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS29955 43685653c104f758c70b88881284b925 213 PIRSF PIRSF006324 3 212 8.2E-55 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS29955 43685653c104f758c70b88881284b925 213 PANTHER PTHR30086:SF7 4 209 3.6E-73 T 13-09-2016 PMA3_RS29955 43685653c104f758c70b88881284b925 213 Pfam PF01810 LysE type translocator 17 208 9.0E-38 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS23635 8ebfcf927a27f5480c90a2d8db704797 366 PIRSF PIRSF028101 1 366 2.9E-148 T 13-09-2016 IPR008311 Uncharacterised conserved protein UCP028101 PMA3_RS23635 8ebfcf927a27f5480c90a2d8db704797 366 Pfam PF07433 Protein of unknown function (DUF1513) 61 364 2.0E-111 T 13-09-2016 IPR008311 Uncharacterised conserved protein UCP028101 PMA3_RS23635 8ebfcf927a27f5480c90a2d8db704797 366 SUPERFAMILY SSF50969 54 354 1.18E-18 T 13-09-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PMA3_RS23635 8ebfcf927a27f5480c90a2d8db704797 366 Gene3D G3DSA:2.130.10.10 79 346 3.9E-14 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS21295 ed12efcffe9c69c16b5131c279ccc8b9 103 Pfam PF04341 Protein of unknown function, DUF485 10 98 7.8E-34 T 13-09-2016 IPR007436 Protein of unknown function DUF485 PMA3_RS21295 ed12efcffe9c69c16b5131c279ccc8b9 103 PANTHER PTHR38598 2 103 3.9E-44 T 13-09-2016 PMA3_RS12610 10ab1ccee48648c87d4567cfa438e8ed 507 SUPERFAMILY SSF46626 488 506 1.02E-17 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12610 10ab1ccee48648c87d4567cfa438e8ed 507 SUPERFAMILY SSF46626 310 431 1.02E-17 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12610 10ab1ccee48648c87d4567cfa438e8ed 507 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 322 368 7.2E-5 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12610 10ab1ccee48648c87d4567cfa438e8ed 507 Gene3D G3DSA:1.10.760.10 487 506 5.5E-11 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS12610 10ab1ccee48648c87d4567cfa438e8ed 507 Gene3D G3DSA:1.10.760.10 315 430 5.5E-11 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS11180 a15b3e044eb5df3636e02f7dde6d813c 453 PIRSF PIRSF002744 1 452 3.9E-123 T 13-09-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PMA3_RS11180 a15b3e044eb5df3636e02f7dde6d813c 453 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 428 3.7E-78 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS11180 a15b3e044eb5df3636e02f7dde6d813c 453 PANTHER PTHR31806 1 452 9.2E-126 T 13-09-2016 PMA3_RS11180 a15b3e044eb5df3636e02f7dde6d813c 453 PANTHER PTHR31806:SF1 1 452 9.2E-126 T 13-09-2016 PMA3_RS10885 616c0d4975fe597a705a3900f1c72b81 114 PANTHER PTHR34583:SF1 1 114 7.7E-50 T 13-09-2016 PMA3_RS10885 616c0d4975fe597a705a3900f1c72b81 114 PANTHER PTHR34583 1 114 7.7E-50 T 13-09-2016 PMA3_RS10885 616c0d4975fe597a705a3900f1c72b81 114 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 109 2.3E-24 T 13-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PMA3_RS00260 0b3aa6403110c4082a514585dd82cd2a 107 PANTHER PTHR10160 11 96 6.3E-32 T 13-09-2016 PMA3_RS00260 0b3aa6403110c4082a514585dd82cd2a 107 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 12 95 1.6E-35 T 13-09-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 PMA3_RS00260 0b3aa6403110c4082a514585dd82cd2a 107 PANTHER PTHR10160:SF19 11 96 6.3E-32 T 13-09-2016 PMA3_RS27685 e7c1253764406e900b338b188f130472 213 SUPERFAMILY SSF140990 14 175 1.09E-8 T 13-09-2016 PMA3_RS20545 7715a608f31e359493051c599d4b3afe 242 PANTHER PTHR28047 1 232 3.8E-70 T 13-09-2016 PMA3_RS20545 7715a608f31e359493051c599d4b3afe 242 PANTHER PTHR28047:SF1 1 232 3.8E-70 T 13-09-2016 PMA3_RS12405 df36f12f0a0b256d4507ab9b96aa0ef4 93 Gene3D G3DSA:3.10.50.40 3 93 1.4E-35 T 13-09-2016 PMA3_RS12405 df36f12f0a0b256d4507ab9b96aa0ef4 93 PANTHER PTHR10657 4 93 1.7E-41 T 13-09-2016 PMA3_RS12405 df36f12f0a0b256d4507ab9b96aa0ef4 93 SUPERFAMILY SSF54534 3 89 2.75E-29 T 13-09-2016 PMA3_RS12405 df36f12f0a0b256d4507ab9b96aa0ef4 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 13-09-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PMA3_RS12405 df36f12f0a0b256d4507ab9b96aa0ef4 93 Pfam PF13616 PPIC-type PPIASE domain 7 91 3.3E-23 T 13-09-2016 PMA3_RS00660 ff6aaab5d0610a18dd7997806601fd72 127 Pfam PF12680 SnoaL-like domain 17 113 1.1E-7 T 13-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain PMA3_RS00660 ff6aaab5d0610a18dd7997806601fd72 127 SUPERFAMILY SSF54427 17 116 3.26E-12 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS00660 ff6aaab5d0610a18dd7997806601fd72 127 Gene3D G3DSA:3.10.450.50 4 121 2.5E-18 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS14140 b646c30ac83ec5dbb165d076f010a711 336 PANTHER PTHR30106 4 336 1.9E-57 T 13-09-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PMA3_RS14140 b646c30ac83ec5dbb165d076f010a711 336 Pfam PF03601 Conserved hypothetical protein 698 18 316 8.7E-73 T 13-09-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PMA3_RS16495 c0846a791e31718b3c0e0dbfe105971a 688 Gene3D G3DSA:3.20.20.80 82 201 3.5E-16 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS16495 c0846a791e31718b3c0e0dbfe105971a 688 Gene3D G3DSA:3.20.20.80 250 426 3.5E-16 T 13-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PMA3_RS16495 c0846a791e31718b3c0e0dbfe105971a 688 TIGRFAM TIGR02455 TreS_stutzeri: trehalose synthase 1 687 0.0 T 13-09-2016 IPR012665 Trehalose synthase PMA3_RS16495 c0846a791e31718b3c0e0dbfe105971a 688 SUPERFAMILY SSF51445 491 549 1.82E-34 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS16495 c0846a791e31718b3c0e0dbfe105971a 688 SUPERFAMILY SSF51445 225 450 1.82E-34 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS16495 c0846a791e31718b3c0e0dbfe105971a 688 SUPERFAMILY SSF51445 53 182 1.82E-34 T 13-09-2016 IPR017853 Glycoside hydrolase superfamily PMA3_RS22970 1aa0cd84f9978416df7d8fb52b7b4192 144 Gene3D G3DSA:3.40.630.30 26 120 2.1E-13 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22970 1aa0cd84f9978416df7d8fb52b7b4192 144 SUPERFAMILY SSF55729 12 112 5.83E-16 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS22970 1aa0cd84f9978416df7d8fb52b7b4192 144 Pfam PF00583 Acetyltransferase (GNAT) family 41 107 2.0E-10 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS30280 ddde590a8658c83b32e186f24dc6c269 312 PANTHER PTHR36698:SF2 2 312 1.2E-94 T 13-09-2016 PMA3_RS30280 ddde590a8658c83b32e186f24dc6c269 312 PANTHER PTHR36698 2 312 1.2E-94 T 13-09-2016 PMA3_RS30280 ddde590a8658c83b32e186f24dc6c269 312 Pfam PF02470 MlaD protein 39 115 2.6E-13 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS05965 e2fee68d275ffc0682e833520398ceea 180 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 180 1.1E-60 T 13-09-2016 IPR018636 Protein of unknown function DUF2058 PMA3_RS13550 f73033231816fc93c5522616b2343ab1 233 Pfam PF01988 VIT family 19 226 5.1E-56 T 13-09-2016 IPR008217 Ccc1 family PMA3_RS13550 f73033231816fc93c5522616b2343ab1 233 PANTHER PTHR31851 9 233 7.7E-62 T 13-09-2016 PMA3_RS25065 17a9fc9a52d373c3011371d6b1138f57 155 PANTHER PTHR33371 1 146 7.2E-39 T 13-09-2016 PMA3_RS25065 17a9fc9a52d373c3011371d6b1138f57 155 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 147 2.5E-54 T 13-09-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PMA3_RS25065 17a9fc9a52d373c3011371d6b1138f57 155 Pfam PF02470 MlaD protein 38 116 1.1E-23 T 13-09-2016 IPR003399 Mce/MlaD PMA3_RS06795 531429df7aad841afaca772060daf0e7 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 249 7.3E-13 T 13-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PMA3_RS06795 531429df7aad841afaca772060daf0e7 274 SUPERFAMILY SSF53850 31 256 3.26E-25 T 13-09-2016 PMA3_RS06795 531429df7aad841afaca772060daf0e7 274 Gene3D G3DSA:3.40.190.10 27 141 1.0E-7 T 13-09-2016 PMA3_RS19440 06934dddc3dd194174f48e83d555fbb7 152 PANTHER PTHR23091:SF256 7 149 8.6E-30 T 13-09-2016 PMA3_RS19440 06934dddc3dd194174f48e83d555fbb7 152 Gene3D G3DSA:3.40.630.30 6 145 7.2E-31 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19440 06934dddc3dd194174f48e83d555fbb7 152 SUPERFAMILY SSF55729 7 146 8.58E-30 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS19440 06934dddc3dd194174f48e83d555fbb7 152 PANTHER PTHR23091 7 149 8.6E-30 T 13-09-2016 PMA3_RS19440 06934dddc3dd194174f48e83d555fbb7 152 Pfam PF00583 Acetyltransferase (GNAT) family 57 136 1.8E-14 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS07350 2afbcf6db2041cb6aeff8163858bf660 180 PIRSF PIRSF029505 1 179 1.1E-89 T 13-09-2016 IPR016922 Uncharacterised conserved protein UCP029505 PMA3_RS27075 e6c34af7e7a2f4523797ffa06d987998 184 PANTHER PTHR11080:SF35 4 180 2.9E-55 T 13-09-2016 PMA3_RS27075 e6c34af7e7a2f4523797ffa06d987998 184 SUPERFAMILY SSF52499 3 181 1.01E-51 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS27075 e6c34af7e7a2f4523797ffa06d987998 184 PANTHER PTHR11080 4 180 2.9E-55 T 13-09-2016 PMA3_RS27075 e6c34af7e7a2f4523797ffa06d987998 184 Pfam PF00857 Isochorismatase family 5 148 2.5E-38 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS27075 e6c34af7e7a2f4523797ffa06d987998 184 Gene3D G3DSA:3.40.50.850 1 181 1.1E-52 T 13-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PMA3_RS04850 c8babf1dd612d342cd252e3293c014d9 268 Pfam PF01148 Cytidylyltransferase family 3 265 3.0E-65 T 13-09-2016 PMA3_RS04850 c8babf1dd612d342cd252e3293c014d9 268 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 13-09-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 PMA3_RS04850 c8babf1dd612d342cd252e3293c014d9 268 PANTHER PTHR13773 1 265 6.3E-71 T 13-09-2016 PMA3_RS01845 5462d7a2af5520cf0d117ae2e5519094 253 SUPERFAMILY SSF53448 7 150 1.35E-12 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS01845 5462d7a2af5520cf0d117ae2e5519094 253 Gene3D G3DSA:3.90.550.10 9 123 8.7E-7 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS26365 63aced4c5901cdb19c1a795f60b7fc3b 121 Pfam PF00816 H-NS histone family 14 109 1.4E-5 T 13-09-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 PMA3_RS11770 fab44e38bcb0b8bf91be0fdd8a0fc571 548 Pfam PF06980 Protein of unknown function (DUF1302) 38 548 1.3E-102 T 13-09-2016 IPR010727 Protein of unknown function DUF1302 PMA3_RS04430 6a092d4b41735a820d62315ec8fa6e57 71 PANTHER PTHR35175 7 57 8.1E-18 T 13-09-2016 PMA3_RS04430 6a092d4b41735a820d62315ec8fa6e57 71 Pfam PF06945 Protein of unknown function (DUF1289) 10 55 1.5E-19 T 13-09-2016 IPR010710 Protein of unknown function DUF1289 PMA3_RS18120 334718def69709cf2fdf481fc50bf0f2 296 Gene3D G3DSA:3.10.180.10 4 123 4.6E-23 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS18120 334718def69709cf2fdf481fc50bf0f2 296 SUPERFAMILY SSF54593 2 120 7.86E-19 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS18120 334718def69709cf2fdf481fc50bf0f2 296 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 243 264 - T 13-09-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 PMA3_RS18120 334718def69709cf2fdf481fc50bf0f2 296 Gene3D G3DSA:3.10.180.10 138 292 4.3E-47 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS18120 334718def69709cf2fdf481fc50bf0f2 296 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 145 265 1.1E-19 T 13-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PMA3_RS18120 334718def69709cf2fdf481fc50bf0f2 296 SUPERFAMILY SSF54593 138 291 9.54E-30 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS11200 090672208fb73d5505d2b6ca84e8d1f3 468 PIRSF PIRSF002744 1 463 2.3E-99 T 13-09-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PMA3_RS11200 090672208fb73d5505d2b6ca84e8d1f3 468 PANTHER PTHR31806 11 467 2.4E-91 T 13-09-2016 PMA3_RS11200 090672208fb73d5505d2b6ca84e8d1f3 468 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 18 439 6.1E-41 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 Gene3D G3DSA:3.40.50.620 1 157 4.8E-57 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 63 3.5E-20 T 13-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 3.3E-59 T 13-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 Pfam PF01467 Cytidylyltransferase-like 5 133 2.3E-24 T 13-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 SUPERFAMILY SSF52374 1 156 3.75E-47 T 13-09-2016 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 7.8E-51 T 13-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 7.8E-51 T 13-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 7.8E-51 T 13-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 7.8E-51 T 13-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 7.8E-51 T 13-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 80 9.0E-5 T 13-09-2016 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 PANTHER PTHR21342 1 159 1.2E-82 T 13-09-2016 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 36.527 T 13-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PMA3_RS28625 b7fcac6d8424e9170a272ff7feb4288d 159 PANTHER PTHR21342:SF1 1 159 1.2E-82 T 13-09-2016 PMA3_RS26330 07ea0156a30cd36cc906d5006cda8c5f 277 SUPERFAMILY SSF88713 5 272 1.58E-56 T 13-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PMA3_RS26330 07ea0156a30cd36cc906d5006cda8c5f 277 Pfam PF01522 Polysaccharide deacetylase 18 155 1.6E-18 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS26330 07ea0156a30cd36cc906d5006cda8c5f 277 Gene3D G3DSA:3.20.20.370 4 271 6.1E-75 T 13-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PMA3_RS26330 07ea0156a30cd36cc906d5006cda8c5f 277 PANTHER PTHR10587 53 194 1.1E-24 T 13-09-2016 PMA3_RS22040 3d67ab8fb5ed3be93af6a1d4e8f2469e 135 SUPERFAMILY SSF54427 2 126 2.09E-21 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS22040 3d67ab8fb5ed3be93af6a1d4e8f2469e 135 Gene3D G3DSA:3.10.450.50 3 130 3.7E-22 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS22040 3d67ab8fb5ed3be93af6a1d4e8f2469e 135 Pfam PF13474 SnoaL-like domain 7 128 1.3E-13 T 13-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain PMA3_RS02475 0a5689e39b7eefe2026233152a92c11d 241 PANTHER PTHR36925 1 220 3.1E-66 T 13-09-2016 PMA3_RS02475 0a5689e39b7eefe2026233152a92c11d 241 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 3 236 7.0E-57 T 13-09-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 PMA3_RS06005 08e0d9e27aa32ab421b3b94ba4f81b89 150 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 74 1.3E-11 T 13-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PMA3_RS06005 08e0d9e27aa32ab421b3b94ba4f81b89 150 SUPERFAMILY SSF53254 1 136 1.8E-21 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS06005 08e0d9e27aa32ab421b3b94ba4f81b89 150 PANTHER PTHR23029 1 78 3.3E-12 T 13-09-2016 PMA3_RS06005 08e0d9e27aa32ab421b3b94ba4f81b89 150 Gene3D G3DSA:3.40.50.1240 1 147 3.8E-29 T 13-09-2016 IPR029033 Histidine phosphatase superfamily PMA3_RS06005 08e0d9e27aa32ab421b3b94ba4f81b89 150 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 118 1.2E-22 T 13-09-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- PMA3_RS06005 08e0d9e27aa32ab421b3b94ba4f81b89 150 SMART SM00855 2 109 1.8E-6 T 13-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PMA3_RS00200 ee1a2c435bd8d1ddc24f4c9385bf6b94 71 Pfam PF07311 Dodecin 6 68 4.4E-30 T 13-09-2016 IPR009923 Dodecin PMA3_RS00200 ee1a2c435bd8d1ddc24f4c9385bf6b94 71 PANTHER PTHR39324:SF1 1 71 5.4E-23 T 13-09-2016 PMA3_RS00200 ee1a2c435bd8d1ddc24f4c9385bf6b94 71 SUPERFAMILY SSF89807 6 69 8.76E-26 T 13-09-2016 IPR009923 Dodecin PMA3_RS00200 ee1a2c435bd8d1ddc24f4c9385bf6b94 71 Gene3D G3DSA:3.30.1660.10 4 69 8.9E-34 T 13-09-2016 IPR025543 Dodecin-like PMA3_RS00200 ee1a2c435bd8d1ddc24f4c9385bf6b94 71 PANTHER PTHR39324 1 71 5.4E-23 T 13-09-2016 PMA3_RS11275 7afd77c2750a60fb665f96ecc3a66711 363 PANTHER PTHR37951 1 335 2.0E-20 T 13-09-2016 PMA3_RS11275 7afd77c2750a60fb665f96ecc3a66711 363 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 9 357 8.3E-112 T 13-09-2016 IPR017740 Type VI secretion system-associated, ImpA PMA3_RS11275 7afd77c2750a60fb665f96ecc3a66711 363 PANTHER PTHR37951:SF1 1 335 2.0E-20 T 13-09-2016 PMA3_RS11275 7afd77c2750a60fb665f96ecc3a66711 363 Pfam PF06812 ImpA, N-terminal, type VI secretion system 18 133 6.5E-25 T 13-09-2016 IPR010657 ImpA, N-terminal PMA3_RS14630 397d53db532c407ff1ae2749515fa66f 120 PANTHER PTHR38598 19 116 3.8E-27 T 13-09-2016 PMA3_RS14630 397d53db532c407ff1ae2749515fa66f 120 Pfam PF04341 Protein of unknown function, DUF485 28 115 6.5E-28 T 13-09-2016 IPR007436 Protein of unknown function DUF485 PMA3_RS16900 65eacae5f01d123f6debf1bbfe727e09 737 Pfam PF03170 Bacterial cellulose synthase subunit 50 185 2.7E-5 T 13-09-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 PMA3_RS28925 d15c35dc3131eb8be062ab81baf842cc 260 Gene3D G3DSA:1.10.3720.10 50 245 2.1E-27 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28925 d15c35dc3131eb8be062ab81baf842cc 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 242 4.7E-27 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS28925 d15c35dc3131eb8be062ab81baf842cc 260 PANTHER PTHR30151:SF22 1 259 4.9E-182 T 13-09-2016 PMA3_RS28925 d15c35dc3131eb8be062ab81baf842cc 260 PANTHER PTHR30151 1 259 4.9E-182 T 13-09-2016 PMA3_RS28925 d15c35dc3131eb8be062ab81baf842cc 260 SUPERFAMILY SSF161098 52 233 2.09E-35 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS03915 01f3a4d31ec3f2f1966f4de6c5d2cd69 194 Pfam PF01169 Uncharacterized protein family UPF0016 105 180 1.8E-21 T 13-09-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PMA3_RS03915 01f3a4d31ec3f2f1966f4de6c5d2cd69 194 Pfam PF01169 Uncharacterized protein family UPF0016 10 79 7.0E-20 T 13-09-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PMA3_RS03915 01f3a4d31ec3f2f1966f4de6c5d2cd69 194 PANTHER PTHR12608 10 191 3.9E-37 T 13-09-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PMA3_RS21975 e16cd398b7fb4f62bebd888261adfc7b 599 Gene3D G3DSA:1.25.40.10 555 582 4.5E-4 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS21975 e16cd398b7fb4f62bebd888261adfc7b 599 Gene3D G3DSA:1.25.40.10 344 385 4.5E-4 T 13-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PMA3_RS21975 e16cd398b7fb4f62bebd888261adfc7b 599 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 556 597 1.7E-15 T 13-09-2016 IPR020011 Motility protein FimV, C-terminal PMA3_RS17215 53d2285c772da40250a1996921d10094 85 Pfam PF10976 Protein of unknown function (DUF2790) 36 81 1.2E-12 T 13-09-2016 IPR021245 Protein of unknown function DUF2790 PMA3_RS18600 f4549ba54e2819d8ec410f610b0c0cdd 144 Pfam PF11026 Protein of unknown function (DUF2721) 18 140 3.6E-23 T 13-09-2016 IPR021279 Protein of unknown function DUF2721 PMA3_RS13115 8efb24f1de191eb504a4db25db0dac0e 1610 Gene3D G3DSA:3.40.390.10 1365 1484 5.2E-5 T 13-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PMA3_RS05490 c169b940265e0a7f7a9be596d0466d3e 146 PANTHER PTHR42641 4 140 1.1E-59 T 13-09-2016 PMA3_RS05490 c169b940265e0a7f7a9be596d0466d3e 146 PANTHER PTHR42641:SF2 4 140 1.1E-59 T 13-09-2016 PMA3_RS05490 c169b940265e0a7f7a9be596d0466d3e 146 Pfam PF05232 Chlorhexidine efflux transporter 5 67 9.3E-23 T 13-09-2016 IPR007896 Chlorhexidine efflux transporter PMA3_RS05490 c169b940265e0a7f7a9be596d0466d3e 146 Pfam PF05232 Chlorhexidine efflux transporter 73 136 6.2E-25 T 13-09-2016 IPR007896 Chlorhexidine efflux transporter PMA3_RS22280 b183bc6fcdca103194054a6f119fd96b 392 Pfam PF05762 VWA domain containing CoxE-like protein 186 272 1.4E-9 T 13-09-2016 IPR008912 Uncharacterised protein family CoxE-like PMA3_RS04355 275132ca691efccfd0185dd16b2bea31 373 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 353 6.6E-75 T 13-09-2016 IPR005495 Permease LptG/LptF-related GO:0016021 PMA3_RS04355 275132ca691efccfd0185dd16b2bea31 373 PANTHER PTHR33529:SF2 2 373 4.1E-112 T 13-09-2016 PMA3_RS04355 275132ca691efccfd0185dd16b2bea31 373 PANTHER PTHR33529 2 373 4.1E-112 T 13-09-2016 PMA3_RS04355 275132ca691efccfd0185dd16b2bea31 373 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 354 1.8E-117 T 13-09-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 PMA3_RS12050 8101424d5eee7581fbd29b259cbb8ca6 91 Pfam PF06155 Protein of unknown function (DUF971) 8 87 8.6E-21 T 13-09-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 PMA3_RS18565 20330e0a827174c4ba041e5af38ca2d5 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS18565 20330e0a827174c4ba041e5af38ca2d5 491 Pfam PF00171 Aldehyde dehydrogenase family 20 477 2.8E-152 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS18565 20330e0a827174c4ba041e5af38ca2d5 491 PANTHER PTHR11699:SF203 1 491 4.0E-266 T 13-09-2016 PMA3_RS18565 20330e0a827174c4ba041e5af38ca2d5 491 Gene3D G3DSA:3.40.605.10 17 272 2.6E-76 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS18565 20330e0a827174c4ba041e5af38ca2d5 491 Gene3D G3DSA:3.40.309.10 273 456 3.4E-62 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS18565 20330e0a827174c4ba041e5af38ca2d5 491 PANTHER PTHR11699 1 491 4.0E-266 T 13-09-2016 PMA3_RS18565 20330e0a827174c4ba041e5af38ca2d5 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 13-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS18565 20330e0a827174c4ba041e5af38ca2d5 491 SUPERFAMILY SSF53720 17 484 9.29E-147 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS15520 8fdc2149b7ce31bc028cc1d21cf38089 63 SUPERFAMILY SSF55331 1 39 2.04E-7 T 13-09-2016 IPR014347 Tautomerase/MIF superfamily PMA3_RS15520 8fdc2149b7ce31bc028cc1d21cf38089 63 Gene3D G3DSA:3.30.429.10 1 39 1.1E-9 T 13-09-2016 PMA3_RS15520 8fdc2149b7ce31bc028cc1d21cf38089 63 Pfam PF14552 Tautomerase enzyme 1 39 1.5E-9 T 13-09-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 PMA3_RS13050 89e36ff8fab052d5ee8c165412034b7d 94 Pfam PF11275 Protein of unknown function (DUF3077) 8 78 1.1E-9 T 13-09-2016 IPR021427 Protein of unknown function DUF3077 PMA3_RS10445 df825e89bc5f979f88bee5bb90597235 736 Gene3D G3DSA:3.40.720.10 228 518 1.9E-34 T 13-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PMA3_RS10445 df825e89bc5f979f88bee5bb90597235 736 PANTHER PTHR10342:SF237 282 531 1.2E-48 T 13-09-2016 PMA3_RS10445 df825e89bc5f979f88bee5bb90597235 736 Pfam PF00884 Sulfatase 227 494 2.4E-34 T 13-09-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PMA3_RS10445 df825e89bc5f979f88bee5bb90597235 736 PANTHER PTHR10342 282 531 1.2E-48 T 13-09-2016 PMA3_RS10445 df825e89bc5f979f88bee5bb90597235 736 SUPERFAMILY SSF53649 226 558 1.14E-54 T 13-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PMA3_RS10360 15e6cfc4cb408dd971aee3b3be9fd64a 356 SUPERFAMILY SSF51658 91 282 2.49E-20 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS10360 15e6cfc4cb408dd971aee3b3be9fd64a 356 Pfam PF01261 Xylose isomerase-like TIM barrel 89 237 1.6E-13 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS10360 15e6cfc4cb408dd971aee3b3be9fd64a 356 Gene3D G3DSA:3.20.20.150 55 242 2.4E-25 T 13-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PMA3_RS20055 22a9697a04e5ea163882d74dd9df2ba3 146 SUPERFAMILY SSF69118 4 144 4.11E-48 T 13-09-2016 IPR029032 AhpD-like PMA3_RS20055 22a9697a04e5ea163882d74dd9df2ba3 146 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 1.1E-22 T 13-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS20055 22a9697a04e5ea163882d74dd9df2ba3 146 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 30 77 1.4E-18 T 13-09-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PMA3_RS20055 22a9697a04e5ea163882d74dd9df2ba3 146 Gene3D G3DSA:1.20.1290.10 1 145 5.0E-56 T 13-09-2016 IPR029032 AhpD-like PMA3_RS24505 0822a59de745fc56ead0e14509566f80 383 SUPERFAMILY SSF55681 101 170 4.35E-22 T 13-09-2016 PMA3_RS24505 0822a59de745fc56ead0e14509566f80 383 SUPERFAMILY SSF55681 197 380 4.35E-22 T 13-09-2016 PMA3_RS24505 0822a59de745fc56ead0e14509566f80 383 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 199 369 4.7E-10 T 13-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PMA3_RS24505 0822a59de745fc56ead0e14509566f80 383 Gene3D G3DSA:3.30.930.10 113 373 3.8E-14 T 13-09-2016 PMA3_RS24445 134cd0ebfc4072b0bb861f9f4052a6eb 252 SUPERFAMILY SSF51197 40 251 1.6E-28 T 13-09-2016 PMA3_RS24445 134cd0ebfc4072b0bb861f9f4052a6eb 252 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 74 250 4.2E-15 T 13-09-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PMA3_RS24445 134cd0ebfc4072b0bb861f9f4052a6eb 252 Gene3D G3DSA:3.60.130.10 39 251 9.1E-28 T 13-09-2016 PMA3_RS24445 134cd0ebfc4072b0bb861f9f4052a6eb 252 PANTHER PTHR10696 46 251 2.5E-17 T 13-09-2016 PMA3_RS25370 8839702df03b6309c15a3c9f5e9a6b74 217 Gene3D G3DSA:1.10.3720.10 11 204 5.7E-33 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25370 8839702df03b6309c15a3c9f5e9a6b74 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 210 3.0E-20 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS25370 8839702df03b6309c15a3c9f5e9a6b74 217 PANTHER PTHR30177 14 215 1.3E-82 T 13-09-2016 PMA3_RS25370 8839702df03b6309c15a3c9f5e9a6b74 217 PANTHER PTHR30177:SF4 14 215 1.3E-82 T 13-09-2016 PMA3_RS25370 8839702df03b6309c15a3c9f5e9a6b74 217 SUPERFAMILY SSF161098 14 203 1.96E-35 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS16865 42116a54113b03f1fc1a0a4bfbb2c538 150 SUPERFAMILY SSF82784 19 147 7.98E-27 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS16865 42116a54113b03f1fc1a0a4bfbb2c538 150 PANTHER PTHR33797:SF3 2 148 1.2E-35 T 13-09-2016 PMA3_RS16865 42116a54113b03f1fc1a0a4bfbb2c538 150 PANTHER PTHR33797 2 148 1.2E-35 T 13-09-2016 PMA3_RS16865 42116a54113b03f1fc1a0a4bfbb2c538 150 Pfam PF02566 OsmC-like protein 53 145 1.8E-13 T 13-09-2016 IPR003718 OsmC/Ohr family PMA3_RS16865 42116a54113b03f1fc1a0a4bfbb2c538 150 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 24 147 4.2E-29 T 13-09-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 PMA3_RS16865 42116a54113b03f1fc1a0a4bfbb2c538 150 Gene3D G3DSA:3.30.300.20 57 147 2.6E-26 T 13-09-2016 IPR015946 K homology domain-like, alpha/beta PMA3_RS28995 4c7c7a7072d9600cedd268ff1d1e72f8 105 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 99 7.0E-39 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS28995 4c7c7a7072d9600cedd268ff1d1e72f8 105 Pfam PF09498 Protein of unknown function (DUF2388) 29 98 9.4E-33 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS23575 43f1a4f2d897e795dd6dbf263675717b 330 SUPERFAMILY SSF51735 1 263 3.39E-65 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23575 43f1a4f2d897e795dd6dbf263675717b 330 SUPERFAMILY SSF51735 293 326 3.39E-65 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23575 43f1a4f2d897e795dd6dbf263675717b 330 Gene3D G3DSA:3.40.50.720 1 320 8.3E-56 T 13-09-2016 IPR016040 NAD(P)-binding domain PMA3_RS23575 43f1a4f2d897e795dd6dbf263675717b 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 227 1.4E-33 T 13-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PMA3_RS23575 43f1a4f2d897e795dd6dbf263675717b 330 PANTHER PTHR10366:SF418 272 327 1.5E-88 T 13-09-2016 PMA3_RS23575 43f1a4f2d897e795dd6dbf263675717b 330 PANTHER PTHR10366 272 327 1.5E-88 T 13-09-2016 PMA3_RS23575 43f1a4f2d897e795dd6dbf263675717b 330 PANTHER PTHR10366 2 251 1.5E-88 T 13-09-2016 PMA3_RS23575 43f1a4f2d897e795dd6dbf263675717b 330 PANTHER PTHR10366:SF418 2 251 1.5E-88 T 13-09-2016 PMA3_RS28700 b6497166da36d76c551aae1cb198c2bf 176 SUPERFAMILY SSF69318 7 157 9.68E-5 T 13-09-2016 PMA3_RS28700 b6497166da36d76c551aae1cb198c2bf 176 Gene3D G3DSA:4.10.1080.10 36 68 5.5E-4 T 13-09-2016 IPR028974 TSP type-3 repeat GO:0005509 PMA3_RS28700 b6497166da36d76c551aae1cb198c2bf 176 Gene3D G3DSA:4.10.1080.10 124 160 5.5E-4 T 13-09-2016 IPR028974 TSP type-3 repeat GO:0005509 PMA3_RS12860 56e3310b6d73de31145c9dc5b5c40050 206 Pfam PF07486 Cell Wall Hydrolase 95 198 2.9E-23 T 13-09-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 PMA3_RS26635 43ab25b7631308e4f5b5c46622699886 1173 SUPERFAMILY SSF51120 629 716 3.14E-11 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS26635 43ab25b7631308e4f5b5c46622699886 1173 SUPERFAMILY SSF51120 520 601 3.14E-11 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS26635 43ab25b7631308e4f5b5c46622699886 1173 Gene3D G3DSA:2.150.10.10 516 706 2.6E-9 T 13-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PMA3_RS04710 3d85053603c55a5302446c188fbdac58 366 SUPERFAMILY SSF111369 47 274 1.96E-26 T 13-09-2016 PMA3_RS04710 3d85053603c55a5302446c188fbdac58 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 352 3.0E-77 T 13-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PMA3_RS04710 3d85053603c55a5302446c188fbdac58 366 PANTHER PTHR32347 1 354 1.6E-86 T 13-09-2016 PMA3_RS04710 3d85053603c55a5302446c188fbdac58 366 PANTHER PTHR32347:SF12 1 354 1.6E-86 T 13-09-2016 PMA3_RS04710 3d85053603c55a5302446c188fbdac58 366 Gene3D G3DSA:2.40.50.100 61 91 3.7E-19 T 13-09-2016 PMA3_RS04710 3d85053603c55a5302446c188fbdac58 366 Gene3D G3DSA:2.40.50.100 166 197 3.7E-19 T 13-09-2016 PMA3_RS04710 3d85053603c55a5302446c188fbdac58 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 260 1.1E-23 T 13-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PMA3_RS08040 cec1731a7c9a94e1f8cbb88949cdb9e4 353 PANTHER PTHR21716:SF13 1 343 5.0E-91 T 13-09-2016 PMA3_RS08040 cec1731a7c9a94e1f8cbb88949cdb9e4 353 PANTHER PTHR21716 1 343 5.0E-91 T 13-09-2016 IPR002549 Transmembrane protein TqsA-like PMA3_RS08040 cec1731a7c9a94e1f8cbb88949cdb9e4 353 Pfam PF01594 Domain of unknown function DUF20 14 336 2.8E-54 T 13-09-2016 IPR002549 Transmembrane protein TqsA-like PMA3_RS27810 86b9e61cea2285542dd1c2a00d3ef2ab 633 PANTHER PTHR35399:SF2 15 633 9.3E-217 T 13-09-2016 PMA3_RS27810 86b9e61cea2285542dd1c2a00d3ef2ab 633 SUPERFAMILY SSF63829 292 389 7.85E-15 T 13-09-2016 PMA3_RS27810 86b9e61cea2285542dd1c2a00d3ef2ab 633 SUPERFAMILY SSF63829 430 600 7.85E-15 T 13-09-2016 PMA3_RS27810 86b9e61cea2285542dd1c2a00d3ef2ab 633 Pfam PF05787 Bacterial protein of unknown function (DUF839) 59 600 1.4E-182 T 13-09-2016 IPR008557 Protein of unknown function DUF839 PMA3_RS27810 86b9e61cea2285542dd1c2a00d3ef2ab 633 Gene3D G3DSA:2.120.10.30 424 594 1.4E-9 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS27810 86b9e61cea2285542dd1c2a00d3ef2ab 633 PANTHER PTHR35399 15 633 9.3E-217 T 13-09-2016 PMA3_RS10315 3ad88b107ccc8a1e25fc50a4566cb16f 271 Pfam PF06724 Domain of Unknown Function (DUF1206) 190 259 1.2E-11 T 13-09-2016 IPR009597 Domain of unknown function DUF1206 PMA3_RS10315 3ad88b107ccc8a1e25fc50a4566cb16f 271 Pfam PF06724 Domain of Unknown Function (DUF1206) 14 79 3.0E-18 T 13-09-2016 IPR009597 Domain of unknown function DUF1206 PMA3_RS10315 3ad88b107ccc8a1e25fc50a4566cb16f 271 Pfam PF06724 Domain of Unknown Function (DUF1206) 95 167 3.8E-11 T 13-09-2016 IPR009597 Domain of unknown function DUF1206 PMA3_RS25600 a2f19c5462b2568779bd0257334d9731 175 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 6 143 37.874 T 13-09-2016 IPR026592 Outer membrane protein assembly factor BamE PMA3_RS25600 a2f19c5462b2568779bd0257334d9731 175 PANTHER PTHR37482:SF1 2 159 6.2E-46 T 13-09-2016 PMA3_RS25600 a2f19c5462b2568779bd0257334d9731 175 PANTHER PTHR37482 2 159 6.2E-46 T 13-09-2016 PMA3_RS25600 a2f19c5462b2568779bd0257334d9731 175 Pfam PF04355 SmpA / OmlA family 35 101 6.5E-26 T 13-09-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PMA3_RS24465 7722cf389f6fbb11388e07e37d8a1478 153 SUPERFAMILY SSF51182 27 145 2.23E-21 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS24465 7722cf389f6fbb11388e07e37d8a1478 153 Gene3D G3DSA:2.60.120.10 20 146 3.7E-22 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS24465 7722cf389f6fbb11388e07e37d8a1478 153 Pfam PF07883 Cupin domain 72 137 1.5E-12 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS06175 2dc502da1c7a996e9d0a908bbca0109d 254 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 3 253 44.948 T 13-09-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PMA3_RS06175 2dc502da1c7a996e9d0a908bbca0109d 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 246 3.7E-96 T 13-09-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PMA3_RS06175 2dc502da1c7a996e9d0a908bbca0109d 254 PANTHER PTHR21485 5 254 2.0E-117 T 13-09-2016 PMA3_RS06175 2dc502da1c7a996e9d0a908bbca0109d 254 Gene3D G3DSA:3.90.550.10 5 253 3.3E-81 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS06175 2dc502da1c7a996e9d0a908bbca0109d 254 PANTHER PTHR21485:SF4 5 254 2.0E-117 T 13-09-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PMA3_RS06175 2dc502da1c7a996e9d0a908bbca0109d 254 Pfam PF02348 Cytidylyltransferase 7 226 8.8E-59 T 13-09-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PMA3_RS06175 2dc502da1c7a996e9d0a908bbca0109d 254 SUPERFAMILY SSF53448 5 252 3.29E-62 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS25850 38b708ee24546e5cd66ece769ca30164 254 Pfam PF01925 Sulfite exporter TauE/SafE 20 248 3.4E-25 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS12935 b786664877f0d7620af5d624b0a8ba6c 163 SUPERFAMILY SSF55729 1 133 2.4E-15 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS12935 b786664877f0d7620af5d624b0a8ba6c 163 Pfam PF00583 Acetyltransferase (GNAT) family 62 133 1.3E-7 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS12935 b786664877f0d7620af5d624b0a8ba6c 163 Gene3D G3DSA:3.40.630.30 1 133 3.2E-13 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS26645 fb81d1411dc1ea7ad8704ae813daa853 196 PANTHER PTHR23327:SF0 1 155 2.6E-49 T 13-09-2016 PMA3_RS26645 fb81d1411dc1ea7ad8704ae813daa853 196 SMART SM00464 2 189 9.1E-14 T 13-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PMA3_RS26645 fb81d1411dc1ea7ad8704ae813daa853 196 SUPERFAMILY SSF88697 1 188 3.48E-44 T 13-09-2016 IPR015947 PUA-like domain PMA3_RS26645 fb81d1411dc1ea7ad8704ae813daa853 196 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 188 1.2E-20 T 13-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PMA3_RS26645 fb81d1411dc1ea7ad8704ae813daa853 196 PANTHER PTHR23327 1 155 2.6E-49 T 13-09-2016 PMA3_RS16165 86fd333526b8b18cc00bf13d2cdc3bae 330 SMART SM00729 14 218 5.7E-8 T 13-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PMA3_RS16165 86fd333526b8b18cc00bf13d2cdc3bae 330 PANTHER PTHR22960 1 283 1.0E-114 T 13-09-2016 PMA3_RS16165 86fd333526b8b18cc00bf13d2cdc3bae 330 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 13-09-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS16165 86fd333526b8b18cc00bf13d2cdc3bae 330 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 330 4.5E-108 T 13-09-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS16165 86fd333526b8b18cc00bf13d2cdc3bae 330 Gene3D G3DSA:3.20.20.70 6 288 3.6E-68 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS16165 86fd333526b8b18cc00bf13d2cdc3bae 330 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 330 39.37 T 13-09-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS16165 86fd333526b8b18cc00bf13d2cdc3bae 330 Pfam PF06463 Molybdenum Cofactor Synthesis C 184 312 1.2E-33 T 13-09-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PMA3_RS16165 86fd333526b8b18cc00bf13d2cdc3bae 330 SUPERFAMILY SSF102114 6 292 9.16E-71 T 13-09-2016 PMA3_RS16165 86fd333526b8b18cc00bf13d2cdc3bae 330 Pfam PF13353 4Fe-4S single cluster domain 21 113 4.6E-8 T 13-09-2016 PMA3_RS16165 86fd333526b8b18cc00bf13d2cdc3bae 330 Pfam PF04055 Radical SAM superfamily 18 178 6.6E-28 T 13-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PMA3_RS08665 e4665eedacf8a9201261ca99e4b72f28 188 Pfam PF10972 Peptidoglycan-binding protein, CsiV 63 172 1.2E-16 T 13-09-2016 IPR021241 Peptidoglycan-binding protein, CsiV PMA3_RS20900 cdd635767466137dd6cfdfd35a985983 134 Pfam PF05523 WxcM-like, C-terminal 5 131 3.2E-47 T 13-09-2016 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 PMA3_RS20900 cdd635767466137dd6cfdfd35a985983 134 Gene3D G3DSA:2.60.120.10 26 124 9.4E-6 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS20900 cdd635767466137dd6cfdfd35a985983 134 SUPERFAMILY SSF51182 5 132 3.34E-42 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS14980 aca4ec167614bc9f1761c99adb8f72fd 169 PANTHER PTHR33778 1 161 5.6E-49 T 13-09-2016 PMA3_RS14980 aca4ec167614bc9f1761c99adb8f72fd 169 Pfam PF02308 MgtC family 32 157 1.1E-38 T 13-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PMA3_RS14980 aca4ec167614bc9f1761c99adb8f72fd 169 PRINTS PR01837 MgtC/SapB protein signature 54 72 3.1E-42 T 13-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PMA3_RS14980 aca4ec167614bc9f1761c99adb8f72fd 169 PRINTS PR01837 MgtC/SapB protein signature 81 103 3.1E-42 T 13-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PMA3_RS14980 aca4ec167614bc9f1761c99adb8f72fd 169 PRINTS PR01837 MgtC/SapB protein signature 112 136 3.1E-42 T 13-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PMA3_RS14980 aca4ec167614bc9f1761c99adb8f72fd 169 PRINTS PR01837 MgtC/SapB protein signature 35 54 3.1E-42 T 13-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PMA3_RS25070 befcdc2d34f30b961f4aa8bab77553dd 265 PANTHER PTHR30188 2 263 3.2E-117 T 13-09-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PMA3_RS25070 befcdc2d34f30b961f4aa8bab77553dd 265 PANTHER PTHR30188:SF4 2 263 3.2E-117 T 13-09-2016 PMA3_RS25070 befcdc2d34f30b961f4aa8bab77553dd 265 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 12 262 8.2E-92 T 13-09-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PMA3_RS25070 befcdc2d34f30b961f4aa8bab77553dd 265 Pfam PF02405 Permease MlaE 49 260 3.4E-76 T 13-09-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PMA3_RS04785 8c4c3117f25b023d637b85227440d576 134 SUPERFAMILY SSF82649 3 133 1.62E-43 T 13-09-2016 PMA3_RS04785 8c4c3117f25b023d637b85227440d576 134 PANTHER PTHR12735 1 134 1.2E-49 T 13-09-2016 PMA3_RS04785 8c4c3117f25b023d637b85227440d576 134 Gene3D G3DSA:3.90.1010.10 2 133 5.5E-46 T 13-09-2016 PMA3_RS04785 8c4c3117f25b023d637b85227440d576 134 Pfam PF02657 Fe-S metabolism associated domain 12 131 6.7E-40 T 13-09-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 PMA3_RS04785 8c4c3117f25b023d637b85227440d576 134 PANTHER PTHR12735:SF26 1 134 1.2E-49 T 13-09-2016 PMA3_RS11165 24e1f8c1976f85ecfd6fa34f4a9be031 359 PANTHER PTHR24421 127 334 1.0E-47 T 13-09-2016 PMA3_RS11165 24e1f8c1976f85ecfd6fa34f4a9be031 359 SUPERFAMILY SSF55874 215 337 7.86E-16 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11165 24e1f8c1976f85ecfd6fa34f4a9be031 359 Gene3D G3DSA:3.30.565.10 228 339 9.6E-11 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11165 24e1f8c1976f85ecfd6fa34f4a9be031 359 Pfam PF07730 Histidine kinase 149 207 3.3E-10 T 13-09-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PMA3_RS11165 24e1f8c1976f85ecfd6fa34f4a9be031 359 PANTHER PTHR24421:SF12 127 334 1.0E-47 T 13-09-2016 PMA3_RS11165 24e1f8c1976f85ecfd6fa34f4a9be031 359 SMART SM00387 248 342 6.5E-10 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS11165 24e1f8c1976f85ecfd6fa34f4a9be031 359 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 251 324 1.7E-8 T 13-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PMA3_RS04725 14d40169ab553cf20c88e28fba227e52 229 Pfam PF13852 Protein of unknown function (DUF4197) 29 227 3.3E-74 T 13-09-2016 IPR025245 Protein of unknown function DUF4197 PMA3_RS11780 0f30c1d953abadfa7f46605f97d14f5d 277 Pfam PF12697 Alpha/beta hydrolase family 34 267 3.4E-19 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS11780 0f30c1d953abadfa7f46605f97d14f5d 277 SUPERFAMILY SSF53474 11 275 6.28E-61 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS11780 0f30c1d953abadfa7f46605f97d14f5d 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 1.1E-13 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS11780 0f30c1d953abadfa7f46605f97d14f5d 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 1.1E-13 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS11780 0f30c1d953abadfa7f46605f97d14f5d 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.1E-13 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS11780 0f30c1d953abadfa7f46605f97d14f5d 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 76 1.1E-13 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS11780 0f30c1d953abadfa7f46605f97d14f5d 277 PANTHER PTHR10992 163 276 5.6E-51 T 13-09-2016 PMA3_RS11780 0f30c1d953abadfa7f46605f97d14f5d 277 PANTHER PTHR10992 4 147 5.6E-51 T 13-09-2016 PMA3_RS11780 0f30c1d953abadfa7f46605f97d14f5d 277 Gene3D G3DSA:3.40.50.1820 11 275 5.6E-59 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS15310 164c797026484ccc1497732542886e1e 276 Pfam PF10977 Protein of unknown function (DUF2797) 39 272 2.8E-94 T 13-09-2016 IPR021246 Protein of unknown function DUF2797 PMA3_RS20520 3be18e8949e0ea20cc358a1fe77b95c7 328 Gene3D G3DSA:3.30.470.20 40 101 8.5E-4 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS20520 3be18e8949e0ea20cc358a1fe77b95c7 328 Gene3D G3DSA:3.30.470.20 239 289 5.0E-5 T 13-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PMA3_RS20520 3be18e8949e0ea20cc358a1fe77b95c7 328 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 323 2.3E-172 T 13-09-2016 IPR011758 Alpha-L-glutamate ligase-related protein PMA3_RS20520 3be18e8949e0ea20cc358a1fe77b95c7 328 Pfam PF14397 Sugar-transfer associated ATP-grasp 21 294 2.7E-101 T 13-09-2016 PMA3_RS20520 3be18e8949e0ea20cc358a1fe77b95c7 328 SUPERFAMILY SSF56059 232 281 6.26E-18 T 13-09-2016 PMA3_RS20520 3be18e8949e0ea20cc358a1fe77b95c7 328 SUPERFAMILY SSF56059 41 202 6.26E-18 T 13-09-2016 PMA3_RS06330 98e65facdea487a69a0d3e979abebd9b 80 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 31 69 0.004 T 13-09-2016 PMA3_RS28035 af9ef4383d2f2313a656f5be003c4109 93 SUPERFAMILY SSF47413 37 90 1.88E-9 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS28035 af9ef4383d2f2313a656f5be003c4109 93 Gene3D G3DSA:1.10.260.40 38 91 3.3E-13 T 13-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PMA3_RS28035 af9ef4383d2f2313a656f5be003c4109 93 Pfam PF13560 Helix-turn-helix domain 39 91 3.2E-7 T 13-09-2016 PMA3_RS22425 ce67604f46502cc1a6e13da56394e576 140 Pfam PF12680 SnoaL-like domain 11 105 6.6E-11 T 13-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain PMA3_RS22425 ce67604f46502cc1a6e13da56394e576 140 SUPERFAMILY SSF54427 1 116 8.28E-19 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS22425 ce67604f46502cc1a6e13da56394e576 140 Gene3D G3DSA:3.10.450.50 10 118 2.3E-11 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS19230 55df29026948140199874a13cdd04c97 351 Gene3D G3DSA:3.40.718.10 2 348 2.2E-120 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS19230 55df29026948140199874a13cdd04c97 351 SUPERFAMILY SSF53659 3 348 3.26E-117 T 13-09-2016 PMA3_RS19230 55df29026948140199874a13cdd04c97 351 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 239 258 - T 13-09-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PMA3_RS19230 55df29026948140199874a13cdd04c97 351 PANTHER PTHR11835:SF33 4 351 6.7E-221 T 13-09-2016 PMA3_RS19230 55df29026948140199874a13cdd04c97 351 PANTHER PTHR11835 4 351 6.7E-221 T 13-09-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PMA3_RS19230 55df29026948140199874a13cdd04c97 351 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 345 4.2E-88 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS19230 55df29026948140199874a13cdd04c97 351 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 348 2.1E-168 T 13-09-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 PMA3_RS19230 55df29026948140199874a13cdd04c97 351 SMART SM01329 5 345 4.6E-171 T 13-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PMA3_RS02095 be090db0abde5dcd37ca4aec4e429490 521 SUPERFAMILY SSF161098 17 254 2.73E-43 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS02095 be090db0abde5dcd37ca4aec4e429490 521 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 506 2.0E-13 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS02095 be090db0abde5dcd37ca4aec4e429490 521 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 250 4.2E-15 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS02095 be090db0abde5dcd37ca4aec4e429490 521 Gene3D G3DSA:1.10.3720.10 318 512 6.5E-26 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS02095 be090db0abde5dcd37ca4aec4e429490 521 SUPERFAMILY SSF161098 280 513 5.23E-31 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS02095 be090db0abde5dcd37ca4aec4e429490 521 Gene3D G3DSA:1.10.3720.10 24 260 2.6E-39 T 13-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PMA3_RS02095 be090db0abde5dcd37ca4aec4e429490 521 PANTHER PTHR30193 17 266 9.9E-87 T 13-09-2016 PMA3_RS02095 be090db0abde5dcd37ca4aec4e429490 521 PANTHER PTHR30193:SF3 17 266 9.9E-87 T 13-09-2016 PMA3_RS12480 0201c767219b11398b43c27a91dd2d68 103 SUPERFAMILY SSF53474 14 100 3.61E-8 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS12480 0201c767219b11398b43c27a91dd2d68 103 Gene3D G3DSA:3.40.50.1820 12 100 8.3E-10 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS30150 e77218cbd9c0e32dd1b0045dd6e21546 295 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 286 8.0E-48 T 13-09-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PMA3_RS30150 e77218cbd9c0e32dd1b0045dd6e21546 295 PANTHER PTHR30606:SF5 10 295 1.9E-117 T 13-09-2016 PMA3_RS30150 e77218cbd9c0e32dd1b0045dd6e21546 295 PANTHER PTHR30606 10 295 1.9E-117 T 13-09-2016 PMA3_RS30150 e77218cbd9c0e32dd1b0045dd6e21546 295 PIRSF PIRSF026649 1 295 2.9E-97 T 13-09-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PMA3_RS18355 98ed939eb0ffe23a0e8744e834769de3 484 PANTHER PTHR32024:SF3 3 484 3.6E-271 T 13-09-2016 PMA3_RS18355 98ed939eb0ffe23a0e8744e834769de3 484 Pfam PF02386 Cation transport protein 64 477 8.8E-45 T 13-09-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PMA3_RS18355 98ed939eb0ffe23a0e8744e834769de3 484 PANTHER PTHR32024 3 484 3.6E-271 T 13-09-2016 PMA3_RS18355 98ed939eb0ffe23a0e8744e834769de3 484 PIRSF PIRSF006247 1 484 6.1E-170 T 13-09-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 PMA3_RS09855 8ebbb1d986bdb2fdeb3333b7daf122ba 422 Pfam PF03573 outer membrane porin, OprD family 28 420 8.9E-151 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS09855 8ebbb1d986bdb2fdeb3333b7daf122ba 422 Gene3D G3DSA:2.40.160.10 32 422 1.9E-145 T 13-09-2016 IPR023614 Porin domain PMA3_RS09855 8ebbb1d986bdb2fdeb3333b7daf122ba 422 PANTHER PTHR34596 1 422 1.4E-163 T 13-09-2016 PMA3_RS10375 c3a96f5944cd51780d5d848f0a397627 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 274 6.2E-59 T 13-09-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PMA3_RS10375 c3a96f5944cd51780d5d848f0a397627 282 Gene3D G3DSA:3.60.130.10 1 282 1.6E-88 T 13-09-2016 PMA3_RS10375 c3a96f5944cd51780d5d848f0a397627 282 SUPERFAMILY SSF51197 1 281 1.51E-86 T 13-09-2016 PMA3_RS10375 c3a96f5944cd51780d5d848f0a397627 282 PANTHER PTHR30468 1 282 9.7E-68 T 13-09-2016 PMA3_RS02270 749f5e7a259fc398f5b8dd91ccab7505 190 PIRSF PIRSF016919 1 190 3.5E-66 T 13-09-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PMA3_RS02270 749f5e7a259fc398f5b8dd91ccab7505 190 Pfam PF04955 HupE / UreJ protein 11 187 1.5E-60 T 13-09-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PMA3_RS15730 ed5f6dc6a9b4b77c80e982f997a5c8d6 185 SUPERFAMILY SSF52821 51 185 2.88E-19 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS15730 ed5f6dc6a9b4b77c80e982f997a5c8d6 185 TIGRFAM TIGR03865 PQQ_CXXCW: PQQ-dependent catabolism-associated CXXCW motif protein 20 181 2.6E-67 T 13-09-2016 IPR022376 PQQ-dependent catabolism-associated CXXCW motif PMA3_RS15730 ed5f6dc6a9b4b77c80e982f997a5c8d6 185 Pfam PF00581 Rhodanese-like domain 69 172 5.5E-6 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS15730 ed5f6dc6a9b4b77c80e982f997a5c8d6 185 Gene3D G3DSA:3.40.250.10 56 177 2.9E-15 T 13-09-2016 IPR001763 Rhodanese-like domain PMA3_RS02845 606cfe5a0c01e00e1b738d958570e32c 141 PANTHER PTHR11803 27 139 3.6E-32 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS02845 606cfe5a0c01e00e1b738d958570e32c 141 Pfam PF01042 Endoribonuclease L-PSP 26 133 7.1E-22 T 13-09-2016 IPR006175 YjgF/YER057c/UK114 family PMA3_RS02845 606cfe5a0c01e00e1b738d958570e32c 141 Gene3D G3DSA:3.30.1330.40 5 138 3.8E-40 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS02845 606cfe5a0c01e00e1b738d958570e32c 141 SUPERFAMILY SSF55298 25 137 1.38E-31 T 13-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PMA3_RS18940 453957c2729007b2486260c54f2ed8a5 164 PANTHER PTHR12418:SF16 43 164 3.2E-12 T 13-09-2016 PMA3_RS18940 453957c2729007b2486260c54f2ed8a5 164 Gene3D G3DSA:3.10.129.10 8 158 3.6E-45 T 13-09-2016 IPR029069 HotDog domain PMA3_RS18940 453957c2729007b2486260c54f2ed8a5 164 PANTHER PTHR12418 43 164 3.2E-12 T 13-09-2016 PMA3_RS18940 453957c2729007b2486260c54f2ed8a5 164 SUPERFAMILY SSF54637 17 150 1.71E-28 T 13-09-2016 IPR029069 HotDog domain PMA3_RS11985 52336e0d43ed884172a6cf0ec85476b1 223 PANTHER PTHR23291 11 223 4.3E-105 T 13-09-2016 IPR006214 Bax inhibitor 1-related PMA3_RS11985 52336e0d43ed884172a6cf0ec85476b1 223 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 89 120 - T 13-09-2016 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 PMA3_RS11985 52336e0d43ed884172a6cf0ec85476b1 223 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 216 4.6E-40 T 13-09-2016 PMA3_RS11985 52336e0d43ed884172a6cf0ec85476b1 223 PANTHER PTHR23291:SF37 11 223 4.3E-105 T 13-09-2016 PMA3_RS03345 d818afd09614ef23b673c03febe334ac 175 PANTHER PTHR36930:SF1 1 173 3.9E-40 T 13-09-2016 PMA3_RS03345 d818afd09614ef23b673c03febe334ac 175 Pfam PF03473 MOSC domain 54 160 3.3E-8 T 13-09-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PMA3_RS03345 d818afd09614ef23b673c03febe334ac 175 SUPERFAMILY SSF50800 11 162 9.94E-39 T 13-09-2016 IPR011037 Pyruvate kinase-like, insert domain PMA3_RS03345 d818afd09614ef23b673c03febe334ac 175 Gene3D G3DSA:2.40.33.20 11 163 1.6E-39 T 13-09-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like PMA3_RS03345 d818afd09614ef23b673c03febe334ac 175 PANTHER PTHR36930 1 173 3.9E-40 T 13-09-2016 PMA3_RS12840 c6b6fbda002a5dd3979e1b917ea9a7ee 55 TIGRFAM TIGR02973 nitrate_rd_NapE: periplasmic nitrate reductase, NapE protein 11 52 5.4E-23 T 13-09-2016 IPR004448 Nitrate reductas, NapE, periplasmic PMA3_RS12840 c6b6fbda002a5dd3979e1b917ea9a7ee 55 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 53 7.9E-25 T 13-09-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE PMA3_RS22340 72be016587d2380d2e0d7f41a83065de 125 Pfam PF11127 Protein of unknown function (DUF2892) 21 79 1.4E-8 T 13-09-2016 IPR021309 Protein of unknown function DUF2892 PMA3_RS06560 0b4e439ef7c070fb621c109a624cb697 421 SUPERFAMILY SSF52402 139 340 3.77E-7 T 13-09-2016 PMA3_RS06560 0b4e439ef7c070fb621c109a624cb697 421 Gene3D G3DSA:3.40.50.620 139 340 2.8E-5 T 13-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PMA3_RS11520 f8072babae5f7e71c662e208d3eabc73 374 SUPERFAMILY SSF69279 31 191 9.07E-5 T 13-09-2016 PMA3_RS05470 faf004b4b61ca16ea485567132419073 141 PANTHER PTHR35174 7 120 1.2E-29 T 13-09-2016 PMA3_RS05470 faf004b4b61ca16ea485567132419073 141 Pfam PF13474 SnoaL-like domain 7 128 7.1E-20 T 13-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain PMA3_RS05470 faf004b4b61ca16ea485567132419073 141 PANTHER PTHR35174:SF3 7 120 1.2E-29 T 13-09-2016 PMA3_RS05470 faf004b4b61ca16ea485567132419073 141 Gene3D G3DSA:3.10.450.50 2 125 1.7E-35 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS05470 faf004b4b61ca16ea485567132419073 141 SUPERFAMILY SSF54427 5 125 3.74E-32 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS16475 54fa8ef581edf4c7a3f0a35a63e62b7b 319 PANTHER PTHR21240:SF9 23 318 4.5E-70 T 13-09-2016 PMA3_RS16475 54fa8ef581edf4c7a3f0a35a63e62b7b 319 Pfam PF04909 Amidohydrolase 25 318 3.3E-28 T 13-09-2016 IPR006680 Amidohydrolase-related GO:0016787 PMA3_RS16475 54fa8ef581edf4c7a3f0a35a63e62b7b 319 SUPERFAMILY SSF51556 23 318 6.29E-42 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS16475 54fa8ef581edf4c7a3f0a35a63e62b7b 319 PANTHER PTHR21240 23 318 4.5E-70 T 13-09-2016 PMA3_RS16475 54fa8ef581edf4c7a3f0a35a63e62b7b 319 Gene3D G3DSA:3.20.20.140 20 318 1.4E-50 T 13-09-2016 PMA3_RS03255 f9545a814473c05d2ec85d21198e954a 159 Pfam PF14341 PilX N-terminal 13 62 1.6E-13 T 13-09-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain PMA3_RS04545 2480009dd625b35173613cf18c310306 474 Gene3D G3DSA:3.40.605.10 2 258 7.1E-95 T 13-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS04545 2480009dd625b35173613cf18c310306 474 PANTHER PTHR11699 1 474 7.0E-294 T 13-09-2016 PMA3_RS04545 2480009dd625b35173613cf18c310306 474 PANTHER PTHR11699:SF109 1 474 7.0E-294 T 13-09-2016 IPR015657 Aminobutyraldehyde dehydrogenase KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 PMA3_RS04545 2480009dd625b35173613cf18c310306 474 SUPERFAMILY SSF53720 2 472 1.57E-157 T 13-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PMA3_RS04545 2480009dd625b35173613cf18c310306 474 Pfam PF00171 Aldehyde dehydrogenase family 17 470 1.7E-164 T 13-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PMA3_RS04545 2480009dd625b35173613cf18c310306 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 13-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PMA3_RS04545 2480009dd625b35173613cf18c310306 474 Gene3D G3DSA:3.40.309.10 259 445 1.4E-61 T 13-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PMA3_RS18965 59db17b475e5a4571e0e69f4f8d3d767 360 SUPERFAMILY SSF50978 118 333 4.76E-5 T 13-09-2016 IPR017986 WD40-repeat-containing domain GO:0005515 PMA3_RS28900 c36d85c37ee5c662558533cb8eeba8bf 126 Pfam PF07722 Peptidase C26 5 103 1.5E-7 T 13-09-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 PMA3_RS17965 505746a0e088d6cf9bc38da2ede2e38a 539 PANTHER PTHR40269 27 462 2.6E-78 T 13-09-2016 PMA3_RS17965 505746a0e088d6cf9bc38da2ede2e38a 539 PANTHER PTHR40269:SF1 27 462 2.6E-78 T 13-09-2016 PMA3_RS17965 505746a0e088d6cf9bc38da2ede2e38a 539 Pfam PF11737 Protein of unknown function (DUF3300) 65 317 9.9E-86 T 13-09-2016 IPR021728 Protein of unknown function DUF3300 PMA3_RS00375 34a9c042fe7ff5a2524b410608b5ed77 72 Pfam PF11120 Cellulose biosynthesis protein BcsF 1 56 3.4E-10 T 13-09-2016 IPR019995 Cellulose biosynthesis, BcsF/YhjT PMA3_RS01915 cfe418504478b2075e5b7296113fd4ef 430 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 14 374 7.0E-25 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS01915 cfe418504478b2075e5b7296113fd4ef 430 PANTHER PTHR30569 1 422 1.5E-44 T 13-09-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 PMA3_RS01915 cfe418504478b2075e5b7296113fd4ef 430 TIGRFAM TIGR02358 thia_cytX: putative hydroxymethylpyrimidine transporter CytX 24 415 1.7E-130 T 13-09-2016 IPR012732 Hydroxymethylpyrimidine transporter CytX PMA3_RS30050 423d29e54bf85c2c45089c1129e3a389 265 PANTHER PTHR13696 1 263 3.1E-89 T 13-09-2016 PMA3_RS30050 423d29e54bf85c2c45089c1129e3a389 265 SUPERFAMILY SSF52540 1 253 5.84E-67 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS30050 423d29e54bf85c2c45089c1129e3a389 265 PANTHER PTHR13696:SF52 1 263 3.1E-89 T 13-09-2016 PMA3_RS30050 423d29e54bf85c2c45089c1129e3a389 265 Pfam PF13614 AAA domain 3 178 8.4E-63 T 13-09-2016 IPR025669 AAA domain PMA3_RS30050 423d29e54bf85c2c45089c1129e3a389 265 Gene3D G3DSA:3.40.50.300 3 256 7.4E-71 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS01715 162f9c997d562fab69a0dc7463ebadaf 100 SUPERFAMILY SSF102829 11 97 4.18E-19 T 13-09-2016 IPR007838 Cell division protein ZapA-like PMA3_RS01715 162f9c997d562fab69a0dc7463ebadaf 100 Pfam PF05164 Cell division protein ZapA 11 87 6.0E-14 T 13-09-2016 IPR007838 Cell division protein ZapA-like PMA3_RS12650 7aaae2232455082f16341819ce342bea 336 PANTHER PTHR30482 17 312 6.3E-72 T 13-09-2016 PMA3_RS12650 7aaae2232455082f16341819ce342bea 336 PANTHER PTHR30482:SF2 17 312 6.3E-72 T 13-09-2016 PMA3_RS12650 7aaae2232455082f16341819ce342bea 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 303 4.0E-37 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS01885 59918a0e87f30ebe6d5b345bdc11335b 391 Pfam PF01266 FAD dependent oxidoreductase 8 310 7.1E-17 T 13-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PMA3_RS01885 59918a0e87f30ebe6d5b345bdc11335b 391 SUPERFAMILY SSF51905 7 222 4.53E-22 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS01885 59918a0e87f30ebe6d5b345bdc11335b 391 SUPERFAMILY SSF51905 262 302 4.53E-22 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS01885 59918a0e87f30ebe6d5b345bdc11335b 391 Gene3D G3DSA:3.50.50.60 144 221 1.2E-20 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS01885 59918a0e87f30ebe6d5b345bdc11335b 391 Gene3D G3DSA:3.50.50.60 6 86 1.2E-20 T 13-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PMA3_RS09770 d4a2e942feeaa2fa763baf97a138d4b6 217 SUPERFAMILY SSF52266 28 202 2.14E-35 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS09770 d4a2e942feeaa2fa763baf97a138d4b6 217 Gene3D G3DSA:3.40.50.1110 28 202 6.8E-34 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS09770 d4a2e942feeaa2fa763baf97a138d4b6 217 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 201 1.2E-21 T 13-09-2016 IPR013830 SGNH hydrolase-type esterase domain PMA3_RS28380 09f3795efd48d1b3f72541d5a36479e3 209 SUPERFAMILY SSF46785 8 95 1.89E-8 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28380 09f3795efd48d1b3f72541d5a36479e3 209 Gene3D G3DSA:3.30.460.10 92 183 1.1E-12 T 13-09-2016 PMA3_RS28380 09f3795efd48d1b3f72541d5a36479e3 209 Gene3D G3DSA:1.10.10.10 8 76 2.1E-6 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS28380 09f3795efd48d1b3f72541d5a36479e3 209 SUPERFAMILY SSF81301 95 192 7.14E-13 T 13-09-2016 PMA3_RS01930 0ac05f518fa01cd839d62a74b34e6655 150 PANTHER PTHR38774 2 150 3.0E-44 T 13-09-2016 PMA3_RS01930 0ac05f518fa01cd839d62a74b34e6655 150 PANTHER PTHR38774:SF1 2 150 3.0E-44 T 13-09-2016 PMA3_RS01930 0ac05f518fa01cd839d62a74b34e6655 150 Pfam PF06853 Protein of unknown function (DUF1249) 27 145 1.0E-41 T 13-09-2016 IPR009659 Protein of unknown function DUF1249 PMA3_RS06990 a3aee89fb07456fcbe6353e14d777ee5 151 Pfam PF06803 Protein of unknown function (DUF1232) 72 106 1.4E-13 T 13-09-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 PMA3_RS22060 a7211b1e33690dfd7b0aeb2b6f1dd1d8 83 Gene3D G3DSA:1.10.1200.10 10 79 7.8E-6 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS22060 a7211b1e33690dfd7b0aeb2b6f1dd1d8 83 SUPERFAMILY SSF47336 10 79 3.8E-7 T 13-09-2016 IPR009081 Phosphopantetheine binding ACP domain PMA3_RS18380 4df1da608144bb9dd2d4f2828da00cce 107 Gene3D G3DSA:1.10.10.10 5 98 2.3E-37 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18380 4df1da608144bb9dd2d4f2828da00cce 107 PANTHER PTHR33204 4 98 1.1E-36 T 13-09-2016 PMA3_RS18380 4df1da608144bb9dd2d4f2828da00cce 107 SUPERFAMILY SSF46785 5 98 3.3E-29 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS18380 4df1da608144bb9dd2d4f2828da00cce 107 Pfam PF01638 HxlR-like helix-turn-helix 16 98 9.1E-31 T 13-09-2016 IPR002577 Helix-turn-helix, HxlR type PMA3_RS05505 ff80048be6fbf051d2a8b70d861d352c 375 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 46 351 2.3E-36 T 13-09-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PMA3_RS05505 ff80048be6fbf051d2a8b70d861d352c 375 Gene3D G3DSA:3.20.20.190 40 356 2.2E-75 T 13-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PMA3_RS05505 ff80048be6fbf051d2a8b70d861d352c 375 SUPERFAMILY SSF51695 39 357 5.49E-61 T 13-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PMA3_RS05505 ff80048be6fbf051d2a8b70d861d352c 375 PANTHER PTHR23344 209 239 1.4E-61 T 13-09-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 PMA3_RS05505 ff80048be6fbf051d2a8b70d861d352c 375 PANTHER PTHR23344 261 359 1.4E-61 T 13-09-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 PMA3_RS05505 ff80048be6fbf051d2a8b70d861d352c 375 PANTHER PTHR23344 11 190 1.4E-61 T 13-09-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 PMA3_RS18470 fdb3d851ee77d51a0c4bc5e134d258bc 159 Pfam PF12973 ChrR Cupin-like domain 42 99 6.1E-7 T 13-09-2016 IPR025979 ChrR-like cupin domain PMA3_RS18470 fdb3d851ee77d51a0c4bc5e134d258bc 159 SUPERFAMILY SSF51182 3 140 3.32E-24 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS18470 fdb3d851ee77d51a0c4bc5e134d258bc 159 Gene3D G3DSA:2.60.120.10 8 156 6.4E-40 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS12835 215abaddf839cf793e5a726ef6c6565b 86 PANTHER PTHR38603 1 80 2.1E-22 T 13-09-2016 PMA3_RS12835 215abaddf839cf793e5a726ef6c6565b 86 Pfam PF03927 NapD protein 5 77 2.4E-26 T 13-09-2016 IPR005623 Chaperone NapD, nitrate reductase assembly PMA3_RS01305 6eb9c7bb1dd90d6bdc624f2a390db7b6 266 Pfam PF05013 N-formylglutamate amidohydrolase 13 230 6.0E-67 T 13-09-2016 IPR007709 N-formylglutamate amidohydrolase PMA3_RS01305 6eb9c7bb1dd90d6bdc624f2a390db7b6 266 SUPERFAMILY SSF53187 5 262 2.01E-80 T 13-09-2016 PMA3_RS01305 6eb9c7bb1dd90d6bdc624f2a390db7b6 266 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 4 262 9.7E-119 T 13-09-2016 IPR010247 N-formylglutamate deformylase PMA3_RS01305 6eb9c7bb1dd90d6bdc624f2a390db7b6 266 Gene3D G3DSA:3.40.630.40 4 263 1.2E-90 T 13-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PMA3_RS09585 e9eae08236aa21d130a3762da9ef9038 412 SUPERFAMILY SSF56601 29 405 7.51E-87 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS09585 e9eae08236aa21d130a3762da9ef9038 412 Gene3D G3DSA:3.40.710.10 94 386 2.8E-41 T 13-09-2016 IPR012338 Beta-lactamase/transpeptidase-like PMA3_RS09585 e9eae08236aa21d130a3762da9ef9038 412 PANTHER PTHR22935:SF2 81 405 5.6E-76 T 13-09-2016 PMA3_RS09585 e9eae08236aa21d130a3762da9ef9038 412 Pfam PF00144 Beta-lactamase 102 389 3.5E-33 T 13-09-2016 IPR001466 Beta-lactamase-related PMA3_RS09585 e9eae08236aa21d130a3762da9ef9038 412 PANTHER PTHR22935 81 405 5.6E-76 T 13-09-2016 PMA3_RS04805 cb7fba0ca506ccc79a0410c5fc545d78 233 SUPERFAMILY SSF55486 37 231 1.27E-26 T 13-09-2016 PMA3_RS04805 cb7fba0ca506ccc79a0410c5fc545d78 233 Pfam PF01400 Astacin (Peptidase family M12A) 41 230 1.8E-6 T 13-09-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 PMA3_RS04805 cb7fba0ca506ccc79a0410c5fc545d78 233 Gene3D G3DSA:3.40.390.10 38 231 1.1E-27 T 13-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PMA3_RS22150 72d75c6ec27f39d3ec1a4ff3fe9b4a47 271 PANTHER PTHR10992 3 259 7.0E-64 T 13-09-2016 PMA3_RS22150 72d75c6ec27f39d3ec1a4ff3fe9b4a47 271 Pfam PF00561 alpha/beta hydrolase fold 21 127 9.0E-24 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS22150 72d75c6ec27f39d3ec1a4ff3fe9b4a47 271 Gene3D G3DSA:3.40.50.1820 2 257 9.4E-70 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS22150 72d75c6ec27f39d3ec1a4ff3fe9b4a47 271 PANTHER PTHR10992:SF771 3 259 7.0E-64 T 13-09-2016 PMA3_RS22150 72d75c6ec27f39d3ec1a4ff3fe9b4a47 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 6.1E-8 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS22150 72d75c6ec27f39d3ec1a4ff3fe9b4a47 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 6.1E-8 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS22150 72d75c6ec27f39d3ec1a4ff3fe9b4a47 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 6.1E-8 T 13-09-2016 IPR000073 Alpha/beta hydrolase fold-1 PMA3_RS22150 72d75c6ec27f39d3ec1a4ff3fe9b4a47 271 SUPERFAMILY SSF53474 2 257 4.8E-68 T 13-09-2016 IPR029058 Alpha/Beta hydrolase fold PMA3_RS01500 c12fcf3269591c88bffc5277143bb64a 175 Pfam PF04351 Pilus assembly protein, PilP 27 171 1.8E-44 T 13-09-2016 IPR007446 Pilus assembly protein PilP PMA3_RS01500 c12fcf3269591c88bffc5277143bb64a 175 PIRSF PIRSF016481 1 175 1.6E-52 T 13-09-2016 IPR007446 Pilus assembly protein PilP PMA3_RS27845 3367843812ddee9e76b71a6ff6513ef9 235 PANTHER PTHR30231 36 226 3.5E-24 T 13-09-2016 PMA3_RS27845 3367843812ddee9e76b71a6ff6513ef9 235 Gene3D G3DSA:3.30.420.10 33 215 2.0E-34 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS27845 3367843812ddee9e76b71a6ff6513ef9 235 SMART SM00479 40 210 2.8E-11 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS27845 3367843812ddee9e76b71a6ff6513ef9 235 Pfam PF00929 Exonuclease 42 200 5.2E-12 T 13-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PMA3_RS27845 3367843812ddee9e76b71a6ff6513ef9 235 SUPERFAMILY SSF53098 34 213 3.8E-39 T 13-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PMA3_RS10670 00ade1f648f5bf6a51611dda0b8c8120 201 SUPERFAMILY SSF55166 52 175 4.45E-30 T 13-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PMA3_RS10670 00ade1f648f5bf6a51611dda0b8c8120 201 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 111 172 1.4E-14 T 13-09-2016 PMA3_RS19770 5631efa761176445f66f51f9c83f6d21 165 SMART SM00953 24 151 1.4E-13 T 13-09-2016 IPR014914 RES domain PMA3_RS19770 5631efa761176445f66f51f9c83f6d21 165 Pfam PF08808 RES domain 11 140 1.8E-20 T 13-09-2016 IPR014914 RES domain PMA3_RS28815 64e41580d867df5e539ba5a814fab0c3 141 Pfam PF14347 Domain of unknown function (DUF4399) 50 141 5.5E-38 T 13-09-2016 IPR025512 Domain of unknown function DUF4399 PMA3_RS13540 3a64afdfb746359348118eb52d0cab3a 267 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 131 227 6.9E-12 T 13-09-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PMA3_RS03895 252aa49c8189a7349d72a450c58e11a2 60 PIRSF PIRSF037225 1 60 1.6E-25 T 13-09-2016 IPR017143 Uncharacterised conserved protein UCP037225 PMA3_RS03895 252aa49c8189a7349d72a450c58e11a2 60 Pfam PF14255 Cysteine-rich CPXCG 7 56 9.5E-23 T 13-09-2016 IPR025990 Cysteine-rich CPXCG protein PMA3_RS07660 36d6aab3f7d00d929d82daa5c1ace1d3 301 PANTHER PTHR31367 1 300 1.7E-143 T 13-09-2016 PMA3_RS07660 36d6aab3f7d00d929d82daa5c1ace1d3 301 PANTHER PTHR31367:SF5 1 300 1.7E-143 T 13-09-2016 PMA3_RS07660 36d6aab3f7d00d929d82daa5c1ace1d3 301 Pfam PF06189 5'-nucleotidase 38 297 2.1E-114 T 13-09-2016 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: REACT_1698 PMA3_RS18815 c36c33e57c0f57a4c586a8e5c2ee3ffd 249 SUPERFAMILY SSF48317 28 237 5.89E-12 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS18815 c36c33e57c0f57a4c586a8e5c2ee3ffd 249 Pfam PF01569 PAP2 superfamily 101 230 3.4E-14 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS18815 c36c33e57c0f57a4c586a8e5c2ee3ffd 249 Gene3D G3DSA:1.20.144.10 70 232 5.0E-8 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS14155 69a74885288cb38c996a293449aafbd1 351 Pfam PF05853 beta-keto acid cleavage enzyme 15 319 6.3E-63 T 13-09-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 PMA3_RS14155 69a74885288cb38c996a293449aafbd1 351 Gene3D G3DSA:3.20.20.70 14 321 2.0E-79 T 13-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PMA3_RS14155 69a74885288cb38c996a293449aafbd1 351 PANTHER PTHR37418 134 323 7.0E-23 T 13-09-2016 PMA3_RS14155 69a74885288cb38c996a293449aafbd1 351 PANTHER PTHR37418 13 99 7.0E-23 T 13-09-2016 PMA3_RS27660 016733020fcdcb5aed5912bbcb86cf64 95 Pfam PF12161 HsdM N-terminal domain 42 77 2.0E-6 T 13-09-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PMA3_RS27660 016733020fcdcb5aed5912bbcb86cf64 95 SUPERFAMILY SSF53335 40 80 2.66E-7 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS10700 aa4f3ece3b002045759c534ffb35a754 88 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 36 86 7.6E-17 T 13-09-2016 IPR014299 Pentapeptide MXKDX repeat protein PMA3_RS10700 aa4f3ece3b002045759c534ffb35a754 88 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 4 76 5.7E-20 T 13-09-2016 IPR014299 Pentapeptide MXKDX repeat protein PMA3_RS25985 266d46ec38ecbe0fe5282905f9d36824 121 Pfam PF09722 Protein of unknown function (DUF2384) 72 118 4.1E-8 T 13-09-2016 IPR024467 Domain of unknown function DUF2384 PMA3_RS00865 eaba96eca207da2524a8ff6088756067 162 Pfam PF13488 Glycine zipper 76 119 3.9E-5 T 13-09-2016 PMA3_RS06800 2bd350d6c55619ff99c5c69693d2bd7f 118 Pfam PF14346 Domain of unknown function (DUF4398) 12 111 2.6E-25 T 13-09-2016 IPR025511 Domain of unknown function DUF4398 PMA3_RS13065 2a52b11b75982fb62e6968b47bd58285 120 PANTHER PTHR30173 4 105 2.7E-14 T 13-09-2016 PMA3_RS13065 2a52b11b75982fb62e6968b47bd58285 120 Gene3D G3DSA:1.10.10.10 50 104 2.7E-19 T 13-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PMA3_RS13065 2a52b11b75982fb62e6968b47bd58285 120 SUPERFAMILY SSF88659 48 105 1.31E-15 T 13-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS13065 2a52b11b75982fb62e6968b47bd58285 120 Pfam PF08281 Sigma-70, region 4 51 102 1.6E-14 T 13-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PMA3_RS23420 ad701c69b6365d9d9bce8ffa82d68878 506 Pfam PF13559 Domain of unknown function (DUF4129) 426 497 6.0E-6 T 13-09-2016 IPR025403 Domain of unknown function DUF4129 PMA3_RS15595 a8bec370422ba4a56195294e879c832b 285 Pfam PF05425 Copper resistance protein D 180 276 2.1E-14 T 13-09-2016 IPR008457 Copper resistance protein D GO:0016021 PMA3_RS15595 a8bec370422ba4a56195294e879c832b 285 PANTHER PTHR34820 1 284 1.5E-27 T 13-09-2016 PMA3_RS17800 05bdc8affccc87bf3591f3e134bf3cef 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 104 1.1E-22 T 13-09-2016 IPR008407 Branched-chain amino acid transport, AzlD PMA3_RS21180 02f6304856d6ca04613d9640e7266e80 237 Pfam PF11306 Protein of unknown function (DUF3108) 15 218 7.8E-24 T 13-09-2016 IPR021457 Protein of unknown function DUF3108 PMA3_RS18845 c8aba00897d4d8e2bc35d46a71d4f0b9 179 SUPERFAMILY SSF51182 7 173 2.97E-26 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS18845 c8aba00897d4d8e2bc35d46a71d4f0b9 179 Gene3D G3DSA:2.60.120.10 35 173 9.1E-20 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS18845 c8aba00897d4d8e2bc35d46a71d4f0b9 179 Pfam PF07883 Cupin domain 84 153 1.3E-13 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS29470 0b790699d123ff329552e638bfc511cc 120 PANTHER PTHR40943 1 120 1.1E-49 T 13-09-2016 PMA3_RS29470 0b790699d123ff329552e638bfc511cc 120 SUPERFAMILY SSF51182 14 114 7.27E-23 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS29470 0b790699d123ff329552e638bfc511cc 120 Gene3D G3DSA:2.60.120.10 18 118 1.7E-34 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS29470 0b790699d123ff329552e638bfc511cc 120 Pfam PF05899 Protein of unknown function (DUF861) 41 113 6.7E-22 T 13-09-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PMA3_RS20715 151e3a36f787573ee78a6fc3fddf4fe1 273 SUPERFAMILY SSF46626 156 270 4.25E-19 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS20715 151e3a36f787573ee78a6fc3fddf4fe1 273 Gene3D G3DSA:1.10.760.10 177 266 3.0E-13 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS20715 151e3a36f787573ee78a6fc3fddf4fe1 273 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 181 263 3.9E-8 T 13-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PMA3_RS17315 d341db947ae387ee3284ea11ba1b6efc 242 Pfam PF04391 Protein of unknown function (DUF533) 52 237 3.4E-56 T 13-09-2016 IPR007486 Inner membrane protein YebE PMA3_RS17315 d341db947ae387ee3284ea11ba1b6efc 242 SUPERFAMILY SSF158682 91 238 1.7E-21 T 13-09-2016 IPR029024 TerB-like PMA3_RS17315 d341db947ae387ee3284ea11ba1b6efc 242 Gene3D G3DSA:1.10.3680.10 91 237 9.0E-19 T 13-09-2016 IPR029024 TerB-like PMA3_RS00555 c74d9737e992f52fbbc77982f466df03 395 Pfam PF00487 Fatty acid desaturase 11 214 3.1E-12 T 13-09-2016 IPR005804 Fatty acid desaturase domain GO:0006629 PMA3_RS00555 c74d9737e992f52fbbc77982f466df03 395 PANTHER PTHR11351 12 374 1.5E-194 T 13-09-2016 PMA3_RS00555 c74d9737e992f52fbbc77982f466df03 395 PANTHER PTHR11351:SF33 12 374 1.5E-194 T 13-09-2016 PMA3_RS00555 c74d9737e992f52fbbc77982f466df03 395 Pfam PF01610 Transposase 271 387 1.6E-8 T 13-09-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PMA3_RS08420 f4caee95ee4e479e741855428084b36f 126 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 42 120 3.9E-18 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS08420 f4caee95ee4e479e741855428084b36f 126 Pfam PF09498 Protein of unknown function (DUF2388) 64 120 1.2E-14 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS05200 af6b331aacf48e3cb1f6f57f2581a36b 69 Pfam PF02810 SEC-C motif 51 68 9.4E-9 T 13-09-2016 IPR004027 SEC-C motif PMA3_RS05200 af6b331aacf48e3cb1f6f57f2581a36b 69 Gene3D G3DSA:3.10.450.50 21 68 2.1E-11 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS05200 af6b331aacf48e3cb1f6f57f2581a36b 69 SUPERFAMILY SSF103642 48 68 1.36E-8 T 13-09-2016 PMA3_RS13670 f931e7d627d4d819ba39d451d48268d8 91 Pfam PF07865 Protein of unknown function (DUF1652) 12 78 2.5E-26 T 13-09-2016 IPR012448 Protein of unknown function DUF1652 PMA3_RS09705 50cd9115776c87459b375ba63948b64f 140 PANTHER PTHR33452 8 128 3.7E-19 T 13-09-2016 PMA3_RS09705 50cd9115776c87459b375ba63948b64f 140 PANTHER PTHR33452:SF1 8 128 3.7E-19 T 13-09-2016 PMA3_RS09705 50cd9115776c87459b375ba63948b64f 140 Pfam PF07681 DoxX 10 91 3.0E-12 T 13-09-2016 IPR032808 DoxX family PMA3_RS02640 6f4afd9d8806134cf760b2787b0961b4 207 Pfam PF13590 Domain of unknown function (DUF4136) 51 206 2.6E-19 T 13-09-2016 IPR025411 Domain of unknown function DUF4136 PMA3_RS28030 89692a213e6c131d20fac5cd6c73c484 133 Pfam PF07007 Protein of unknown function (DUF1311) 26 125 5.9E-14 T 13-09-2016 IPR009739 Protein of unknown function DUF1311 PMA3_RS11795 58377a039f859c80fdf32cc9c71e158b 211 Gene3D G3DSA:3.10.450.50 14 131 9.9E-25 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS11795 58377a039f859c80fdf32cc9c71e158b 211 Pfam PF13577 SnoaL-like domain 13 131 1.6E-20 T 13-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain PMA3_RS11795 58377a039f859c80fdf32cc9c71e158b 211 SUPERFAMILY SSF54427 8 177 1.09E-32 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS17660 94b92f7f8844cc9fe79ec287870b5f73 650 Gene3D G3DSA:2.130.10.10 137 413 9.6E-44 T 13-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PMA3_RS17660 94b92f7f8844cc9fe79ec287870b5f73 650 PANTHER PTHR13833:SF51 95 392 1.8E-42 T 13-09-2016 PMA3_RS17660 94b92f7f8844cc9fe79ec287870b5f73 650 Pfam PF02239 Cytochrome D1 heme domain 237 338 1.4E-8 T 13-09-2016 PMA3_RS17660 94b92f7f8844cc9fe79ec287870b5f73 650 SUPERFAMILY SSF51004 170 465 1.44E-46 T 13-09-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PMA3_RS17660 94b92f7f8844cc9fe79ec287870b5f73 650 PANTHER PTHR13833 95 392 1.8E-42 T 13-09-2016 PMA3_RS20365 45ee7db9093d1f6675f86cef75930884 396 TIGRFAM TIGR00843 benE: benzoate transporter 12 391 1.2E-128 T 13-09-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PMA3_RS20365 45ee7db9093d1f6675f86cef75930884 396 Pfam PF03594 Benzoate membrane transport protein 14 389 2.3E-155 T 13-09-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PMA3_RS20365 45ee7db9093d1f6675f86cef75930884 396 PANTHER PTHR30199 1 394 1.6E-159 T 13-09-2016 PMA3_RS20365 45ee7db9093d1f6675f86cef75930884 396 PANTHER PTHR30199:SF0 1 394 1.6E-159 T 13-09-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PMA3_RS16995 21179d2b5bbac116e09005aa443ea55d 328 PANTHER PTHR10443:SF24 1 246 4.3E-61 T 13-09-2016 PMA3_RS16995 21179d2b5bbac116e09005aa443ea55d 328 PANTHER PTHR10443:SF24 276 320 4.3E-61 T 13-09-2016 PMA3_RS16995 21179d2b5bbac116e09005aa443ea55d 328 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 13 321 9.4E-85 T 13-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PMA3_RS16995 21179d2b5bbac116e09005aa443ea55d 328 Gene3D G3DSA:3.20.20.140 2 323 8.2E-83 T 13-09-2016 PMA3_RS16995 21179d2b5bbac116e09005aa443ea55d 328 SUPERFAMILY SSF51556 6 245 7.48E-83 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS16995 21179d2b5bbac116e09005aa443ea55d 328 SUPERFAMILY SSF51556 276 324 7.48E-83 T 13-09-2016 IPR032466 Metal-dependent hydrolase PMA3_RS16995 21179d2b5bbac116e09005aa443ea55d 328 PANTHER PTHR10443 276 320 4.3E-61 T 13-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PMA3_RS16995 21179d2b5bbac116e09005aa443ea55d 328 PANTHER PTHR10443 1 246 4.3E-61 T 13-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PMA3_RS02765 388f6088202dfa2c34b3c116f243acae 69 Pfam PF10981 Protein of unknown function (DUF2788) 14 61 3.3E-22 T 13-09-2016 IPR021249 Protein of unknown function DUF2788 PMA3_RS00195 e0870742f05464c4474dd8ebc8caba89 73 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 73 2.0E-18 T 13-09-2016 IPR010595 Protein of unknown function DUF1161 PMA3_RS00195 e0870742f05464c4474dd8ebc8caba89 73 Pfam PF06649 Protein of unknown function (DUF1161) 24 73 7.2E-22 T 13-09-2016 IPR010595 Protein of unknown function DUF1161 PMA3_RS01815 a5eba58b9d4854b77d25654d428e9e77 110 Pfam PF07119 Protein of unknown function (DUF1375) 13 98 1.4E-16 T 13-09-2016 IPR010780 Protein of unknown function DUF1375 PMA3_RS01950 a829cf3597a27f5cc0ce7ab1408dcaa2 329 Pfam PF13449 Esterase-like activity of phytase 40 186 2.6E-9 T 13-09-2016 IPR027372 Phytase-like domain PMA3_RS01950 a829cf3597a27f5cc0ce7ab1408dcaa2 329 SUPERFAMILY SSF101898 42 213 6.54E-6 T 13-09-2016 PMA3_RS28825 5cb5abfbd8ac830282c2a2e078cc80c8 161 PANTHER PTHR30087:SF1 1 161 6.0E-68 T 13-09-2016 PMA3_RS28825 5cb5abfbd8ac830282c2a2e078cc80c8 161 Pfam PF04463 Protein of unknown function (DUF523) 4 147 1.9E-42 T 13-09-2016 IPR007553 Domain of unknown function DUF523 PMA3_RS28825 5cb5abfbd8ac830282c2a2e078cc80c8 161 PANTHER PTHR30087 1 161 6.0E-68 T 13-09-2016 PMA3_RS03790 86b247eb333e7fa6056c758551911e1f 172 SUPERFAMILY SSF56925 26 144 2.22E-5 T 13-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PMA3_RS03790 86b247eb333e7fa6056c758551911e1f 172 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 39 170 2.9E-25 T 13-09-2016 IPR018550 Lipid A 3-O-deacylase-related PMA3_RS03790 86b247eb333e7fa6056c758551911e1f 172 PIRSF PIRSF029681 1 171 6.3E-45 T 13-09-2016 IPR018550 Lipid A 3-O-deacylase-related PMA3_RS03790 86b247eb333e7fa6056c758551911e1f 172 Gene3D G3DSA:2.40.160.20 25 171 9.5E-51 T 13-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PMA3_RS14040 85d6fefc04e253d5d029ef3eb0559ee5 152 Pfam PF08808 RES domain 3 143 1.5E-20 T 13-09-2016 IPR014914 RES domain PMA3_RS14040 85d6fefc04e253d5d029ef3eb0559ee5 152 SMART SM00953 14 140 3.6E-18 T 13-09-2016 IPR014914 RES domain PMA3_RS16270 5cd7bc8382f95d59862bc12e148dedb2 396 Pfam PF05940 NnrS protein 14 390 5.2E-108 T 13-09-2016 IPR010266 NnrS PMA3_RS27100 1a67725a522a8fef5bc1adef0e46aa98 242 Pfam PF06693 Protein of unknown function (DUF1190) 33 231 4.2E-32 T 13-09-2016 IPR009576 Biofilm formation YgiB PMA3_RS06550 e6d39cb6ca0e3de5af3ecd4a2fb5fcdc 647 Gene3D G3DSA:3.40.50.300 26 60 1.0E-4 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06550 e6d39cb6ca0e3de5af3ecd4a2fb5fcdc 647 SUPERFAMILY SSF52540 84 133 2.09E-7 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06550 e6d39cb6ca0e3de5af3ecd4a2fb5fcdc 647 SUPERFAMILY SSF52540 25 56 2.09E-7 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06550 e6d39cb6ca0e3de5af3ecd4a2fb5fcdc 647 SUPERFAMILY SSF52540 208 283 2.09E-7 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS06550 e6d39cb6ca0e3de5af3ecd4a2fb5fcdc 647 Pfam PF07693 KAP family P-loop domain 15 416 2.4E-50 T 13-09-2016 IPR011646 KAP family P-loop domain PMA3_RS06550 e6d39cb6ca0e3de5af3ecd4a2fb5fcdc 647 PANTHER PTHR22674 228 326 4.0E-14 T 13-09-2016 PMA3_RS00180 7c953b21213d1eaeed98d18e88ab5c52 77 Pfam PF06649 Protein of unknown function (DUF1161) 24 74 1.8E-24 T 13-09-2016 IPR010595 Protein of unknown function DUF1161 PMA3_RS00180 7c953b21213d1eaeed98d18e88ab5c52 77 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 74 7.0E-30 T 13-09-2016 IPR010595 Protein of unknown function DUF1161 PMA3_RS17310 9f2fb13205553f9498c5776fbeacc1b4 150 SUPERFAMILY SSF51182 20 115 3.13E-24 T 13-09-2016 IPR011051 RmlC-like cupin domain PMA3_RS17310 9f2fb13205553f9498c5776fbeacc1b4 150 Pfam PF07883 Cupin domain 45 99 9.8E-17 T 13-09-2016 IPR013096 Cupin 2, conserved barrel PMA3_RS17310 9f2fb13205553f9498c5776fbeacc1b4 150 Gene3D G3DSA:2.60.120.10 23 145 1.9E-25 T 13-09-2016 IPR014710 RmlC-like jelly roll fold PMA3_RS22300 1652dbb4a4044ab9e7b6db9ac0d5a7dc 180 PIRSF PIRSF029393 1 172 2.1E-64 T 13-09-2016 IPR016917 Uncharacterised conserved protein UCP029393 PMA3_RS22300 1652dbb4a4044ab9e7b6db9ac0d5a7dc 180 Pfam PF11157 Protein of unknown function (DUF2937) 3 160 8.3E-59 T 13-09-2016 IPR022584 Protein of unknown function DUF2937 PMA3_RS11300 aa096c1434797f466b7eebb3591bcdb4 242 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 19 229 2.5E-60 T 13-09-2016 IPR017732 Type IV / VI secretion system, DotU PMA3_RS11300 aa096c1434797f466b7eebb3591bcdb4 242 PANTHER PTHR38033:SF1 19 241 2.3E-23 T 13-09-2016 PMA3_RS11300 aa096c1434797f466b7eebb3591bcdb4 242 PANTHER PTHR38033 19 241 2.3E-23 T 13-09-2016 PMA3_RS11300 aa096c1434797f466b7eebb3591bcdb4 242 Pfam PF09850 Type VI secretion system protein DotU 19 223 5.6E-53 T 13-09-2016 IPR017732 Type IV / VI secretion system, DotU PMA3_RS08440 654145b19e6851c353712924772304bf 695 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 24 679 2.5E-251 T 13-09-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH PMA3_RS25240 d71dac64eaf94422255d92762f8a3645 313 Pfam PF03547 Membrane transport protein 168 302 8.6E-11 T 13-09-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PMA3_RS25240 d71dac64eaf94422255d92762f8a3645 313 Pfam PF03547 Membrane transport protein 13 143 2.6E-9 T 13-09-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PMA3_RS25240 d71dac64eaf94422255d92762f8a3645 313 PANTHER PTHR31752 93 309 1.7E-56 T 13-09-2016 PMA3_RS25240 d71dac64eaf94422255d92762f8a3645 313 PANTHER PTHR31752:SF13 93 309 1.7E-56 T 13-09-2016 PMA3_RS02645 c16307392b13945e35ac8cb02153a091 184 Pfam PF13590 Domain of unknown function (DUF4136) 21 183 9.2E-28 T 13-09-2016 IPR025411 Domain of unknown function DUF4136 PMA3_RS28170 4a0a4849ac3d046f594cf4f084be0fa9 98 PIRSF PIRSF037266 1 98 5.0E-47 T 13-09-2016 IPR017162 Uncharacterised conserved protein UCP037266 PMA3_RS28170 4a0a4849ac3d046f594cf4f084be0fa9 98 Pfam PF09904 Winged helix-turn helix 5 95 3.5E-40 T 13-09-2016 IPR017162 Uncharacterised conserved protein UCP037266 PMA3_RS13835 c685c9d2b6e83c88b8c69bf929cbc6d7 146 PANTHER PTHR34582:SF6 4 146 4.0E-30 T 13-09-2016 PMA3_RS13835 c685c9d2b6e83c88b8c69bf929cbc6d7 146 Pfam PF04239 Protein of unknown function (DUF421) 85 144 2.6E-13 T 13-09-2016 IPR007353 Protein of unknown function DUF421 PMA3_RS13835 c685c9d2b6e83c88b8c69bf929cbc6d7 146 Gene3D G3DSA:3.30.240.20 76 144 3.4E-21 T 13-09-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain PMA3_RS13835 c685c9d2b6e83c88b8c69bf929cbc6d7 146 PANTHER PTHR34582 4 146 4.0E-30 T 13-09-2016 PMA3_RS13725 efa5e6597cf8da142ad892836ae96073 372 Pfam PF05488 PAAR motif 15 84 5.3E-8 T 13-09-2016 IPR008727 PAAR motif PMA3_RS13725 efa5e6597cf8da142ad892836ae96073 372 Pfam PF15607 Bacterial toxin 44 218 339 1.4E-24 T 13-09-2016 IPR028946 Bacterial toxin 44 PMA3_RS15590 2fabcdefe6ec14e2f1eafdabf2ee1138 121 Pfam PF04234 CopC domain 25 119 2.1E-21 T 13-09-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 PMA3_RS15590 2fabcdefe6ec14e2f1eafdabf2ee1138 121 SUPERFAMILY SSF81296 24 120 3.5E-24 T 13-09-2016 IPR014756 Immunoglobulin E-set PMA3_RS15590 2fabcdefe6ec14e2f1eafdabf2ee1138 121 Gene3D G3DSA:2.60.40.1220 24 120 2.5E-26 T 13-09-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like PMA3_RS02460 345d6ea5730821d71ac0cc99293ac4d7 132 Pfam PF11162 Protein of unknown function (DUF2946) 9 130 4.1E-13 T 13-09-2016 IPR021333 Protein of unknown function DUF2946 PMA3_RS00480 52ebed192be7ad73d7c767e75e6eee22 174 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 3 134 4.1E-21 T 13-09-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 PMA3_RS00480 52ebed192be7ad73d7c767e75e6eee22 174 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 3 135 1.0E-51 T 13-09-2016 PMA3_RS00480 52ebed192be7ad73d7c767e75e6eee22 174 Pfam PF13994 PgaD-like protein 4 131 7.0E-26 T 13-09-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 PMA3_RS21150 05cb7f6b6168fa4cef68fa4a026703b3 216 SUPERFAMILY SSF54001 74 201 8.17E-38 T 13-09-2016 PMA3_RS21150 05cb7f6b6168fa4cef68fa4a026703b3 216 PANTHER PTHR21666 78 214 1.5E-34 T 13-09-2016 PMA3_RS21150 05cb7f6b6168fa4cef68fa4a026703b3 216 Pfam PF00877 NlpC/P60 family 89 198 8.6E-29 T 13-09-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS21150 05cb7f6b6168fa4cef68fa4a026703b3 216 Gene3D G3DSA:3.90.1720.10 76 203 2.1E-41 T 13-09-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PMA3_RS07465 d81d411cbc922e1627902bc313750749 225 Gene3D G3DSA:3.40.50.200 5 216 3.9E-19 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS07465 d81d411cbc922e1627902bc313750749 225 SUPERFAMILY SSF52743 6 223 5.89E-27 T 13-09-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PMA3_RS06820 686fd9f05def3aaac65bfca86ba2cfd2 84 PANTHER PTHR36931 1 83 6.2E-34 T 13-09-2016 PMA3_RS06820 686fd9f05def3aaac65bfca86ba2cfd2 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 60 2.1E-6 T 13-09-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PMA3_RS03795 720be9dd586a48d67bf7a97121ec0efd 101 Pfam PF03692 Putative zinc- or iron-chelating domain 16 84 1.0E-9 T 13-09-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PMA3_RS23950 44a79fd7733c9b1d7f7c646410ffcde4 502 Pfam PF14264 Glucosyl transferase GtrII 30 336 9.2E-28 T 13-09-2016 IPR025686 Glucosyl transferase II PMA3_RS26970 f740cdcc3db3306157d6ee57fdd9b6fa 152 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 62 132 1.8E-6 T 13-09-2016 PMA3_RS01680 31eb537347e3cde31dc6a82e2fdd36c2 241 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 24 238 6.4E-80 T 13-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PMA3_RS06670 f4f2818c6fb78ff8c452051e59d8d243 201 Pfam PF16105 Domain of unknown function (DUF4823) 48 195 3.1E-57 T 13-09-2016 IPR032248 Protein of unknown function DUF4823 PMA3_RS18585 bc0a2ead500ae366c759cb6cf0005e9d 363 Pfam PF12275 Protein of unknown function (DUF3616) 23 358 1.1E-123 T 13-09-2016 IPR022060 Protein of unknown function DUF3616 PMA3_RS12655 2d8e3f60faa51801d34268b3839fcfe6 286 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 275 2.6E-35 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS12655 2d8e3f60faa51801d34268b3839fcfe6 286 PANTHER PTHR11795:SF379 2 286 6.7E-84 T 13-09-2016 PMA3_RS12655 2d8e3f60faa51801d34268b3839fcfe6 286 PANTHER PTHR11795 2 286 6.7E-84 T 13-09-2016 PMA3_RS21755 ccfa417000c991e9c0d38c8934c5a4da 98 Pfam PF05400 Flagellar protein FliT 16 94 1.8E-6 T 13-09-2016 IPR008622 Flagellar protein FliT PMA3_RS29430 6a307cc7d5410183d5596eb51a8a4e7e 117 Pfam PF03692 Putative zinc- or iron-chelating domain 19 82 5.8E-10 T 13-09-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PMA3_RS29430 6a307cc7d5410183d5596eb51a8a4e7e 117 PIRSF PIRSF029611 1 117 4.3E-71 T 13-09-2016 IPR016928 Uncharacterised conserved protein UCP029611 PMA3_RS08735 78edeba6e5a575a5dd19dc67f2243332 87 Pfam PF14357 Domain of unknown function (DUF4404) 6 87 1.0E-26 T 13-09-2016 IPR025516 Protein of unknown function DUF4404 PMA3_RS17575 94d4cccfc49b8c39d29998fa43914be1 288 Pfam PF03783 Curli production assembly/transport component CsgG 47 259 3.3E-77 T 13-09-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 PMA3_RS22820 72c8b84da9430284ebc5539fee16126e 401 SUPERFAMILY SSF53335 127 317 5.18E-18 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS22820 72c8b84da9430284ebc5539fee16126e 401 Gene3D G3DSA:3.40.50.150 185 274 5.8E-11 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS22820 72c8b84da9430284ebc5539fee16126e 401 Pfam PF13679 Methyltransferase domain 164 300 6.9E-27 T 13-09-2016 IPR025714 Methyltransferase domain PMA3_RS22820 72c8b84da9430284ebc5539fee16126e 401 PANTHER PTHR13369 164 369 3.2E-26 T 13-09-2016 PMA3_RS20930 d954fdf61b424ccb9d3837689fbf97d5 75 Pfam PF06305 Protein of unknown function (DUF1049) 26 74 1.4E-6 T 13-09-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PMA3_RS19925 df5aad4f33e7a838f96ca1a2f2383ac9 151 PANTHER PTHR34821 1 145 8.0E-22 T 13-09-2016 PMA3_RS19925 df5aad4f33e7a838f96ca1a2f2383ac9 151 Pfam PF04657 Putative inner membrane exporter, YdcZ 7 141 3.2E-31 T 13-09-2016 IPR006750 Putative inner membrane exporter, YdcZ PMA3_RS25680 3702baab6aeb02b9ebce01c2e5cdaca9 483 PIRSF PIRSF006060 12 480 1.4E-39 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS25680 3702baab6aeb02b9ebce01c2e5cdaca9 483 Pfam PF13520 Amino acid permease 47 460 2.0E-21 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS25680 3702baab6aeb02b9ebce01c2e5cdaca9 483 PANTHER PTHR11785 48 458 1.0E-13 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS13915 8c1a6e9b8a8516b2b72dad4afa647c92 187 Pfam PF09361 Phasin protein 7 108 6.1E-22 T 13-09-2016 IPR018968 Phasin PMA3_RS13915 8c1a6e9b8a8516b2b72dad4afa647c92 187 TIGRFAM TIGR01841 phasin: phasin family protein 28 116 6.3E-19 T 13-09-2016 IPR010127 Phasin, subfamily 1 PMA3_RS03900 76bc56e5e7f1c2ed1b1a32c43db2a78a 86 Pfam PF09413 Putative prokaryotic signal transducing protein 1 66 1.6E-7 T 13-09-2016 IPR018551 Domain of unknown function DUF2007 PMA3_RS00235 632b45bd32bca3a8c8c897852476b1f1 105 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 19 105 4.2E-30 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS00235 632b45bd32bca3a8c8c897852476b1f1 105 Pfam PF09498 Protein of unknown function (DUF2388) 36 104 1.3E-29 T 13-09-2016 IPR012661 Conserved hypothetical protein CHP02448 PMA3_RS17270 545bb474f36991298121d0ba546f41d2 241 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 2 211 2.4E-15 T 13-09-2016 IPR003776 YcaO-like domain PMA3_RS03065 7f05ab89fabeaeec1c952851e9937308 65 PANTHER PTHR38453 1 65 1.2E-38 T 13-09-2016 PMA3_RS03065 7f05ab89fabeaeec1c952851e9937308 65 Pfam PF04328 Protein of unknown function (DUF466) 5 65 1.2E-29 T 13-09-2016 IPR007423 Protein of unknown function DUF466 PMA3_RS03065 7f05ab89fabeaeec1c952851e9937308 65 PANTHER PTHR38453:SF2 1 65 1.2E-38 T 13-09-2016 PMA3_RS26675 fb56f42dd5c3c9a75bd62049f8627309 94 Pfam PF07119 Protein of unknown function (DUF1375) 8 80 1.3E-23 T 13-09-2016 IPR010780 Protein of unknown function DUF1375 PMA3_RS17815 c9724919fea4c84214f886840f7bcc4d 186 Pfam PF04366 Las17-binding protein actin regulator 99 182 8.1E-8 T 13-09-2016 IPR007461 Ysc84 actin-binding domain PMA3_RS24795 50ca7429a0ca45b27830c58cb04621cd 105 Pfam PF12021 Protein of unknown function (DUF3509) 5 88 8.9E-32 T 13-09-2016 IPR021898 Protein of unknown function DUF3509 PMA3_RS13150 230fda3e3e16f619e289462e763f42b9 157 Pfam PF03168 Late embryogenesis abundant protein 50 140 4.0E-21 T 13-09-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 PMA3_RS13150 230fda3e3e16f619e289462e763f42b9 157 SMART SM00769 30 150 6.7E-39 T 13-09-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 PMA3_RS13150 230fda3e3e16f619e289462e763f42b9 157 SUPERFAMILY SSF117070 8 151 3.4E-29 T 13-09-2016 PMA3_RS13150 230fda3e3e16f619e289462e763f42b9 157 Gene3D G3DSA:2.60.40.10 41 102 1.2E-7 T 13-09-2016 IPR013783 Immunoglobulin-like fold PMA3_RS28535 9e0f4681ba3e4d3e68dcd2628f3df0e4 123 PANTHER PTHR10584 5 66 4.7E-20 T 13-09-2016 PMA3_RS28535 9e0f4681ba3e4d3e68dcd2628f3df0e4 123 PANTHER PTHR10584:SF191 5 66 4.7E-20 T 13-09-2016 PMA3_RS28535 9e0f4681ba3e4d3e68dcd2628f3df0e4 123 Pfam PF04241 Protein of unknown function (DUF423) 19 105 6.5E-30 T 13-09-2016 IPR006696 Protein of unknown function DUF423 PMA3_RS29590 5a6556e7e9a10a1f2a5b34994818fc42 142 PANTHER PTHR30558 1 137 1.2E-73 T 13-09-2016 PMA3_RS29590 5a6556e7e9a10a1f2a5b34994818fc42 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 134 6.2E-30 T 13-09-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PMA3_RS29590 5a6556e7e9a10a1f2a5b34994818fc42 142 PANTHER PTHR30558:SF9 1 137 1.2E-73 T 13-09-2016 PMA3_RS29590 5a6556e7e9a10a1f2a5b34994818fc42 142 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 137 4.6E-68 T 13-09-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 PMA3_RS00145 7e4d86e7eaae32486b795f75eaf40e75 95 Pfam PF09526 Probable metal-binding protein (DUF2387) 8 82 8.4E-34 T 13-09-2016 IPR012658 Conserved hypothetical protein CHP02443 PMA3_RS00145 7e4d86e7eaae32486b795f75eaf40e75 95 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 7 56 4.4E-27 T 13-09-2016 IPR012658 Conserved hypothetical protein CHP02443 PMA3_RS11125 c2a93a08212b8ce0581fe18b476b7927 559 Pfam PF13520 Amino acid permease 23 479 3.5E-88 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS11125 c2a93a08212b8ce0581fe18b476b7927 559 PIRSF PIRSF006060 6 536 4.2E-79 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS11125 c2a93a08212b8ce0581fe18b476b7927 559 PANTHER PTHR11785 330 530 4.9E-37 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS11125 c2a93a08212b8ce0581fe18b476b7927 559 PANTHER PTHR11785 161 307 4.9E-37 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS11125 c2a93a08212b8ce0581fe18b476b7927 559 PANTHER PTHR11785 19 136 4.9E-37 T 13-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PMA3_RS07705 aaf9d8c3c075dcf673aabfdbe19cae00 73 Pfam PF06568 Domain of unknown function (DUF1127) 21 56 7.2E-12 T 13-09-2016 IPR009506 Protein of unknown function DUF1127 PMA3_RS06335 e22be1ad8ea1c2bbdc89d4d51337cc36 121 Pfam PF00816 H-NS histone family 14 109 9.9E-5 T 13-09-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 PMA3_RS29625 8a43b0b45e93a3f138fb703f1d43e775 448 Pfam PF15604 Novel toxin 15 305 445 5.1E-30 T 13-09-2016 IPR028949 Novel toxin 15 PMA3_RS27910 58544b1df1d063ccfdc0b29af093b854 186 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 12 175 2.6E-42 T 13-09-2016 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE PMA3_RS06490 71043e1fe72622b818acd5fae9d127a2 110 Pfam PF10976 Protein of unknown function (DUF2790) 30 106 2.9E-23 T 13-09-2016 IPR021245 Protein of unknown function DUF2790 PMA3_RS20050 ee9d3e8aadf6970ad6cc678a62f9fc94 620 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 49 208 4.5E-29 T 13-09-2016 IPR024618 Domain of unknown function DUF3857 PMA3_RS20050 ee9d3e8aadf6970ad6cc678a62f9fc94 620 Pfam PF01841 Transglutaminase-like superfamily 260 332 6.4E-8 T 13-09-2016 IPR002931 Transglutaminase-like PMA3_RS20050 ee9d3e8aadf6970ad6cc678a62f9fc94 620 SUPERFAMILY SSF54001 254 333 6.87E-11 T 13-09-2016 PMA3_RS05335 a2435a46054a2845b9fd1bacb190491c 101 Pfam PF10052 Protein of unknown function (DUF2288) 8 97 2.3E-31 T 13-09-2016 IPR018741 Protein of unknown function DUF2288 PMA3_RS11270 3fa8d4fa65265c5f5d3d95826c400adc 196 Pfam PF06684 Amino acid synthesis 5 181 1.0E-70 T 13-09-2016 IPR009569 Amino acid synthesis, putative PMA3_RS11270 3fa8d4fa65265c5f5d3d95826c400adc 196 Gene3D G3DSA:3.30.1330.110 1 191 4.1E-83 T 13-09-2016 IPR009569 Amino acid synthesis, putative PMA3_RS11270 3fa8d4fa65265c5f5d3d95826c400adc 196 SUPERFAMILY SSF160519 1 190 3.92E-69 T 13-09-2016 IPR009569 Amino acid synthesis, putative PMA3_RS13980 895ddffa155a7caa37c519d73adde7c5 358 PANTHER PTHR21716:SF20 17 357 2.2E-60 T 13-09-2016 PMA3_RS13980 895ddffa155a7caa37c519d73adde7c5 358 PANTHER PTHR21716 17 357 2.2E-60 T 13-09-2016 IPR002549 Transmembrane protein TqsA-like PMA3_RS13980 895ddffa155a7caa37c519d73adde7c5 358 Pfam PF01594 Domain of unknown function DUF20 22 348 9.3E-29 T 13-09-2016 IPR002549 Transmembrane protein TqsA-like PMA3_RS24655 33afe2f8935e48c79a8c26029416c9e4 217 Pfam PF11182 Alginate O-acetyl transferase AlgF 19 194 3.9E-83 T 13-09-2016 PMA3_RS24655 33afe2f8935e48c79a8c26029416c9e4 217 ProDom PD022759 ALGINATE BIOSYNTHESIS ALGF PRECURSOR SIGNAL PERIPLASMIC TRANSFERASE O-ACETYLTRANSFERASE 5 216 4.0E-110 T 13-09-2016 PMA3_RS15830 03765e529a2f9dbb727dd42d85136af5 202 PANTHER PTHR30086 4 196 1.0E-61 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS15830 03765e529a2f9dbb727dd42d85136af5 202 Pfam PF01810 LysE type translocator 18 196 7.1E-14 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS15830 03765e529a2f9dbb727dd42d85136af5 202 PANTHER PTHR30086:SF12 4 196 1.0E-61 T 13-09-2016 PMA3_RS10895 ce4233d0795eee073cab99ebdb6a13d0 341 PANTHER PTHR12715 44 340 2.4E-37 T 13-09-2016 PMA3_RS10895 ce4233d0795eee073cab99ebdb6a13d0 341 Pfam PF00892 EamA-like transporter family 49 178 7.2E-16 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS10895 ce4233d0795eee073cab99ebdb6a13d0 341 Pfam PF00892 EamA-like transporter family 189 319 2.6E-10 T 13-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PMA3_RS10895 ce4233d0795eee073cab99ebdb6a13d0 341 SUPERFAMILY SSF103481 230 322 2.75E-9 T 13-09-2016 PMA3_RS10895 ce4233d0795eee073cab99ebdb6a13d0 341 SUPERFAMILY SSF103481 82 180 9.02E-13 T 13-09-2016 PMA3_RS15915 98aa0cede920e177fbb7830dcda0049c 174 Pfam PF16304 Domain of unknown function (DUF4946) 26 174 3.6E-65 T 13-09-2016 IPR032543 Protein of unknown function DUF4946 PMA3_RS18450 a28ba32f991b9d393541325929801930 153 Gene3D G3DSA:3.40.630.30 18 138 2.8E-18 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS18450 a28ba32f991b9d393541325929801930 153 SUPERFAMILY SSF55729 19 141 4.12E-19 T 13-09-2016 IPR016181 Acyl-CoA N-acyltransferase PMA3_RS18450 a28ba32f991b9d393541325929801930 153 Pfam PF00583 Acetyltransferase (GNAT) family 60 135 2.8E-11 T 13-09-2016 IPR000182 GNAT domain GO:0008080 PMA3_RS08540 14fd47d9b0be718975a96fd5d34c1a0f 299 Gene3D G3DSA:3.10.129.10 205 292 4.8E-5 T 13-09-2016 IPR029069 HotDog domain PMA3_RS20815 69adb56c751f208e665b159369715d9c 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 28 3.8E-8 T 13-09-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PMA3_RS20815 69adb56c751f208e665b159369715d9c 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 28 1.1E-10 T 13-09-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PMA3_RS04690 de264156a8390a1fce5e2ad3c6376853 232 Pfam PF06904 Extensin-like protein C-terminus 62 232 1.2E-60 T 13-09-2016 IPR009683 Extensin-like, C-terminal PMA3_RS24185 3cf9a1bac9bf67cbad010f474df1d737 263 SUPERFAMILY SSF56317 9 252 1.29E-65 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS24185 3cf9a1bac9bf67cbad010f474df1d737 263 PANTHER PTHR23088:SF28 1 261 4.1E-134 T 13-09-2016 PMA3_RS24185 3cf9a1bac9bf67cbad010f474df1d737 263 Gene3D G3DSA:3.60.110.10 8 258 7.3E-68 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS24185 3cf9a1bac9bf67cbad010f474df1d737 263 PANTHER PTHR23088 1 261 4.1E-134 T 13-09-2016 PMA3_RS24185 3cf9a1bac9bf67cbad010f474df1d737 263 Pfam PF00795 Carbon-nitrogen hydrolase 12 248 3.4E-34 T 13-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PMA3_RS10945 b6e5d3964cdf25db27903f1bf2ae78f6 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 3 101 1.1E-22 T 13-09-2016 IPR008407 Branched-chain amino acid transport, AzlD PMA3_RS13565 f270d93eacbe27b34cef0aeeb89a598e 156 Pfam PF10029 Predicted periplasmic protein (DUF2271) 23 150 3.7E-36 T 13-09-2016 IPR014469 Protein of unknown function DUF2271 PMA3_RS24160 dba29277dca177d12aac8de44ada61d6 255 Pfam PF01925 Sulfite exporter TauE/SafE 23 247 3.3E-29 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS24160 dba29277dca177d12aac8de44ada61d6 255 PANTHER PTHR30269 12 255 5.2E-49 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS24160 dba29277dca177d12aac8de44ada61d6 255 PANTHER PTHR30269:SF14 12 255 5.2E-49 T 13-09-2016 PMA3_RS24395 c365f2198d61b111461d67b91989fd8c 167 Gene3D G3DSA:3.40.50.300 7 114 3.7E-14 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24395 c365f2198d61b111461d67b91989fd8c 167 SUPERFAMILY SSF52540 7 128 2.11E-14 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS24395 c365f2198d61b111461d67b91989fd8c 167 PANTHER PTHR37816 4 112 1.0E-18 T 13-09-2016 PMA3_RS12000 7505a20dc125fb589dc20ed771660153 347 Pfam PF04632 Fusaric acid resistance protein family 20 329 3.8E-18 T 13-09-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PMA3_RS12000 7505a20dc125fb589dc20ed771660153 347 PANTHER PTHR30509 2 285 1.0E-23 T 13-09-2016 PMA3_RS07290 fe0696221cbcfb1afbc4fe28370f4396 260 Gene3D G3DSA:2.110.10.10 15 46 6.4E-7 T 13-09-2016 IPR000585 Hemopexin-like domain PMA3_RS07290 fe0696221cbcfb1afbc4fe28370f4396 260 Gene3D G3DSA:2.110.10.10 171 233 6.4E-7 T 13-09-2016 IPR000585 Hemopexin-like domain PMA3_RS05870 a533ec481568ddf52d428164ba80078f 164 SMART SM00731 7 158 2.1E-46 T 13-09-2016 IPR006640 SprT-like PMA3_RS05870 a533ec481568ddf52d428164ba80078f 164 PANTHER PTHR38773 1 164 6.3E-75 T 13-09-2016 PMA3_RS05870 a533ec481568ddf52d428164ba80078f 164 Pfam PF10263 SprT-like family 10 156 2.1E-29 T 13-09-2016 IPR006640 SprT-like PMA3_RS05870 a533ec481568ddf52d428164ba80078f 164 Hamap MF_00746 Protein SprT [sprT]. 3 158 36.856 T 13-09-2016 IPR023483 Uncharacterised protein family SprT PMA3_RS10345 ab79f6d8226c3381a8bdc20777eb1467 435 Pfam PF07690 Major Facilitator Superfamily 32 319 4.4E-27 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS10345 ab79f6d8226c3381a8bdc20777eb1467 435 Pfam PF07690 Major Facilitator Superfamily 322 417 2.0E-9 T 13-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PMA3_RS10345 ab79f6d8226c3381a8bdc20777eb1467 435 Gene3D G3DSA:1.20.1250.20 227 414 3.4E-22 T 13-09-2016 PMA3_RS10345 ab79f6d8226c3381a8bdc20777eb1467 435 Gene3D G3DSA:1.20.1250.20 19 202 3.5E-21 T 13-09-2016 PMA3_RS10345 ab79f6d8226c3381a8bdc20777eb1467 435 SUPERFAMILY SSF103473 16 414 1.57E-49 T 13-09-2016 IPR020846 Major facilitator superfamily domain PMA3_RS13405 e236866c4b52e78e97767e3ac627a39e 431 Pfam PF13692 Glycosyl transferases group 1 219 356 1.2E-20 T 13-09-2016 PMA3_RS13405 e236866c4b52e78e97767e3ac627a39e 431 SUPERFAMILY SSF53756 160 389 4.04E-21 T 13-09-2016 PMA3_RS13405 e236866c4b52e78e97767e3ac627a39e 431 SUPERFAMILY SSF53756 8 127 4.04E-21 T 13-09-2016 PMA3_RS17890 376096feab58f9ef7f51e9a88fc4aea4 148 Pfam PF08808 RES domain 3 140 6.5E-18 T 13-09-2016 IPR014914 RES domain PMA3_RS17890 376096feab58f9ef7f51e9a88fc4aea4 148 SMART SM00953 11 135 5.6E-19 T 13-09-2016 IPR014914 RES domain PMA3_RS15095 12a92d5315732f699af0e50e51b63027 475 PANTHER PTHR40940 175 386 5.0E-14 T 13-09-2016 PMA3_RS15095 12a92d5315732f699af0e50e51b63027 475 Pfam PF13584 Oxygen tolerance 76 370 1.1E-19 T 13-09-2016 IPR025738 Aerotolerance-related protein BatD PMA3_RS15095 12a92d5315732f699af0e50e51b63027 475 PANTHER PTHR40940:SF1 175 386 5.0E-14 T 13-09-2016 PMA3_RS26305 ffe6c1b4c6e1f1c7acebae202617da8b 298 Gene3D G3DSA:1.20.1510.10 4 207 3.0E-21 T 13-09-2016 IPR027469 Cation efflux protein transmembrane domain PMA3_RS26305 ffe6c1b4c6e1f1c7acebae202617da8b 298 SUPERFAMILY SSF161111 4 208 3.14E-29 T 13-09-2016 PMA3_RS26305 ffe6c1b4c6e1f1c7acebae202617da8b 298 Pfam PF01545 Cation efflux family 9 209 3.4E-31 T 13-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PMA3_RS29295 f804e4b129c3ce56023f53ee11669195 241 Pfam PF04340 Protein of unknown function, DUF484 18 233 7.8E-70 T 13-09-2016 IPR007435 Protein of unknown function DUF484 PMA3_RS29295 f804e4b129c3ce56023f53ee11669195 241 PANTHER PTHR38765 8 241 2.0E-70 T 13-09-2016 PMA3_RS19965 689ea261306bb14baf6a415a172a2d28 102 Pfam PF03413 Peptidase propeptide and YPEB domain 40 98 4.3E-15 T 13-09-2016 IPR025711 PepSY domain PMA3_RS22925 1521d1acabe37ab624bdb674bb58c1f6 161 Gene3D G3DSA:3.20.80.10 37 160 1.1E-27 T 13-09-2016 IPR011256 Regulatory factor, effector binding domain PMA3_RS22925 1521d1acabe37ab624bdb674bb58c1f6 161 Pfam PF06445 GyrI-like small molecule binding domain 22 160 2.5E-26 T 13-09-2016 IPR029442 GyrI-like small molecule binding domain PMA3_RS22925 1521d1acabe37ab624bdb674bb58c1f6 161 SMART SM00871 10 160 5.7E-31 T 13-09-2016 IPR010499 Bacterial transcription activator, effector binding PMA3_RS22925 1521d1acabe37ab624bdb674bb58c1f6 161 SUPERFAMILY SSF55136 37 160 3.14E-32 T 13-09-2016 IPR011256 Regulatory factor, effector binding domain PMA3_RS07725 4fdb3836cdfe48dfe173f44e5e9bb43e 251 PANTHER PTHR11558 5 196 3.6E-20 T 13-09-2016 PMA3_RS07725 4fdb3836cdfe48dfe173f44e5e9bb43e 251 Gene3D G3DSA:3.40.50.150 8 215 8.8E-49 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS07725 4fdb3836cdfe48dfe173f44e5e9bb43e 251 SUPERFAMILY SSF53335 5 199 7.74E-41 T 13-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS08825 88b83b7af24fd1fcf9df91a561a4e19c 234 PANTHER PTHR38477 8 227 1.7E-68 T 13-09-2016 PMA3_RS08825 88b83b7af24fd1fcf9df91a561a4e19c 234 PANTHER PTHR38477:SF1 8 227 1.7E-68 T 13-09-2016 PMA3_RS08825 88b83b7af24fd1fcf9df91a561a4e19c 234 Pfam PF13645 L,D-transpeptidase catalytic domain 37 204 2.4E-64 T 13-09-2016 IPR032676 Putative L,D-transpeptidase catalytic domain PMA3_RS17170 e406c539d4ab2e4840c8c38958ec851b 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 13 157 1.3E-15 T 13-09-2016 IPR009936 Protein of unknown function DUF1468 PMA3_RS21550 e3da37c099b6660bda14b1eb8b7816d2 130 Pfam PF10975 Protein of unknown function (DUF2802) 62 129 5.1E-23 T 13-09-2016 IPR021244 Protein of unknown function DUF2802 PMA3_RS08770 4e9c8cc3be15530e08a1fa7f2e4aced9 117 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 73 111 5.6E-10 T 13-09-2016 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 PMA3_RS00810 053b9da0414bb9267fe6a56b884d6c66 159 SUPERFAMILY SSF50630 9 144 7.97E-43 T 13-09-2016 IPR021109 Aspartic peptidase domain PMA3_RS00810 053b9da0414bb9267fe6a56b884d6c66 159 PANTHER PTHR38037 1 157 6.6E-61 T 13-09-2016 PMA3_RS00810 053b9da0414bb9267fe6a56b884d6c66 159 Gene3D G3DSA:2.40.70.10 8 135 5.6E-43 T 13-09-2016 IPR021109 Aspartic peptidase domain PMA3_RS00810 053b9da0414bb9267fe6a56b884d6c66 159 Pfam PF05618 Putative ATP-dependant zinc protease 9 147 1.4E-45 T 13-09-2016 PMA3_RS28795 b68e7429fed28727ac014643e0f860d3 309 Gene3D G3DSA:2.120.10.30 82 300 2.8E-13 T 13-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like PMA3_RS28795 b68e7429fed28727ac014643e0f860d3 309 SUPERFAMILY SSF50956 22 307 1.07E-33 T 13-09-2016 PMA3_RS28795 b68e7429fed28727ac014643e0f860d3 309 Pfam PF06977 SdiA-regulated 61 306 3.4E-97 T 13-09-2016 IPR009722 SdiA-regulated PMA3_RS01490 87b79040948c64fc110ed507907c074f 187 PANTHER PTHR40278:SF1 1 187 5.4E-49 T 13-09-2016 PMA3_RS01490 87b79040948c64fc110ed507907c074f 187 PANTHER PTHR40278 1 187 5.4E-49 T 13-09-2016 PMA3_RS01490 87b79040948c64fc110ed507907c074f 187 Pfam PF05137 Fimbrial assembly protein (PilN) 100 177 3.2E-22 T 13-09-2016 IPR007813 Fimbrial assembly PilN PMA3_RS16300 9187ba0c38a524fb94bc2070e3dd2d43 85 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 9 77 2.1E-15 T 13-09-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 PMA3_RS13940 ebb1e7eec8f7809aa92e969998852938 163 Pfam PF05233 PHB accumulation regulatory domain 113 150 1.0E-7 T 13-09-2016 IPR007897 PHB accumulation regulatory PMA3_RS13940 ebb1e7eec8f7809aa92e969998852938 163 Pfam PF05233 PHB accumulation regulatory domain 72 108 7.2E-10 T 13-09-2016 IPR007897 PHB accumulation regulatory PMA3_RS13940 ebb1e7eec8f7809aa92e969998852938 163 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 7 109 7.0E-39 T 13-09-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR PMA3_RS13940 ebb1e7eec8f7809aa92e969998852938 163 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 8 67 3.0E-28 T 13-09-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal PMA3_RS05840 9e12457eb857c859e74bddfec26e1344 200 Gene3D G3DSA:2.40.160.20 63 168 2.5E-5 T 13-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PMA3_RS05840 9e12457eb857c859e74bddfec26e1344 200 SUPERFAMILY SSF56925 52 200 8.89E-14 T 13-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PMA3_RS14080 1f3b23c2d31ffd9cda9b77f8be6059a8 120 Pfam PF16703 Domain of unknown function (DUF5064) 4 119 1.2E-42 T 13-09-2016 IPR032024 Protein of unknown function DUF5064 PMA3_RS09075 01f246aa9252894f03fb2adfd7aa8768 186 PANTHER PTHR36926:SF1 2 162 5.1E-71 T 13-09-2016 PMA3_RS09075 01f246aa9252894f03fb2adfd7aa8768 186 PANTHER PTHR36926 2 162 5.1E-71 T 13-09-2016 PMA3_RS09075 01f246aa9252894f03fb2adfd7aa8768 186 Pfam PF02674 Colicin V production protein 6 143 2.8E-34 T 13-09-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PMA3_RS00305 93285f52ee5001dbfd33bde5f8363a91 155 SUPERFAMILY SSF55961 18 150 5.5E-24 T 13-09-2016 PMA3_RS00305 93285f52ee5001dbfd33bde5f8363a91 155 Gene3D G3DSA:3.30.530.20 18 152 5.3E-27 T 13-09-2016 IPR023393 START-like domain PMA3_RS00305 93285f52ee5001dbfd33bde5f8363a91 155 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 18 149 7.3E-18 T 13-09-2016 IPR019587 Polyketide cyclase/dehydrase PMA3_RS26300 35123223e6d59e85b04521daf496960c 243 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 29 243 1.7E-27 T 13-09-2016 IPR010239 Conserved hypothetical protein CHP02001 PMA3_RS26300 35123223e6d59e85b04521daf496960c 243 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 11 243 2.3E-46 T 13-09-2016 IPR010239 Conserved hypothetical protein CHP02001 PMA3_RS24730 d8974922df1fdf74af22ba2351a3953b 169 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 11 165 7.5E-32 T 13-09-2016 IPR018681 Protein of unknown function DUF2165, transmembrane PMA3_RS12580 3054d12a348edd83250798d930028cad 350 SUPERFAMILY SSF144052 37 336 2.75E-12 T 13-09-2016 PMA3_RS08415 21727925ae2e5f55e066b86d2bdea3be 177 Pfam PF13644 DKNYY family 19 150 3.3E-6 T 13-09-2016 IPR027375 DKNYY family PMA3_RS08415 21727925ae2e5f55e066b86d2bdea3be 177 Pfam PF13644 DKNYY family 17 52 6.2E-6 T 13-09-2016 IPR027375 DKNYY family PMA3_RS26070 eafda4ca6caf44c57a2ed52b81ca3924 86 Pfam PF07865 Protein of unknown function (DUF1652) 5 70 5.1E-20 T 13-09-2016 IPR012448 Protein of unknown function DUF1652 PMA3_RS07555 01831c985d983d6e2dd36ce303ab4a45 72 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 13 55 2.3E-8 T 13-09-2016 IPR008621 Cbb3-type cytochrome oxidase component PMA3_RS23990 ea8ff4771e5344de6cb75b7079b4fd8c 247 SUPERFAMILY SSF49354 23 165 3.4E-8 T 13-09-2016 IPR008962 PapD-like PMA3_RS20865 46f321273c32b74bc49ba51346cfdf1d 305 SUPERFAMILY SSF53448 6 222 1.88E-32 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS20865 46f321273c32b74bc49ba51346cfdf1d 305 Gene3D G3DSA:3.90.550.10 8 235 6.7E-26 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS20865 46f321273c32b74bc49ba51346cfdf1d 305 Pfam PF00535 Glycosyl transferase family 2 9 129 7.7E-14 T 13-09-2016 IPR001173 Glycosyltransferase 2-like PMA3_RS20865 46f321273c32b74bc49ba51346cfdf1d 305 PANTHER PTHR22916 1 290 1.5E-15 T 13-09-2016 PMA3_RS05585 2e7a59de2449b512db39b8763f6cd864 87 Pfam PF10976 Protein of unknown function (DUF2790) 8 85 2.0E-30 T 13-09-2016 IPR021245 Protein of unknown function DUF2790 PMA3_RS07755 117c90650c5e5d1911da4c0340d95e7b 367 SUPERFAMILY SSF53448 166 228 3.37E-5 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS07755 117c90650c5e5d1911da4c0340d95e7b 367 SUPERFAMILY SSF53448 98 139 3.37E-5 T 13-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases PMA3_RS20760 7640d36f73f8fb5ed1781011d7d4c1fb 121 Pfam PF06127 Protein of unknown function (DUF962) 12 76 1.5E-5 T 13-09-2016 IPR009305 Protein of unknown function DUF962 PMA3_RS05020 32c6846d39c524b4dac9fdf4bb611521 141 Pfam PF13652 Putative quorum-sensing-regulated virulence factor 22 132 7.8E-62 T 13-09-2016 IPR025203 Putative quorum-sensing-regulated virulence factor, QSregVF PMA3_RS01085 5ab6ec8efd3d9eab0dd1a7a17c2e1ba1 85 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 11 83 1.6E-27 T 13-09-2016 IPR018680 Protein of unknown function DUF2164 PMA3_RS20575 d40759f7b7bb6c46db1d4c70951cc1d5 144 Pfam PF13488 Glycine zipper 76 117 5.5E-5 T 13-09-2016 PMA3_RS00440 e3f0e440d711175bd6e06c123e3cf0ea 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 1.2E-21 T 13-09-2016 IPR012451 Protein of unknown function DUF1656 PMA3_RS16140 e49f07aa59903a45d96f1d6c8bec64ef 73 Pfam PF11278 Protein of unknown function (DUF3079) 1 50 6.3E-32 T 13-09-2016 IPR021430 Protein of unknown function DUF3079 PMA3_RS22330 2761d3352e68e4edd9b48d108db65193 123 SMART SM00507 26 82 3.1E-4 T 13-09-2016 IPR003615 HNH nuclease PMA3_RS22330 2761d3352e68e4edd9b48d108db65193 123 Pfam PF01844 HNH endonuclease 39 87 3.6E-12 T 13-09-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PMA3_RS10935 0bf7088ab526ee262009900c3630cc41 123 Pfam PF10861 Protein of Unknown function (DUF2784) 4 111 1.1E-37 T 13-09-2016 IPR021218 Protein of unknown function DUF2784 PMA3_RS25795 85c519712715a9f85545b251afb6e4f6 277 Gene3D G3DSA:1.20.144.10 71 234 1.2E-6 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS25795 85c519712715a9f85545b251afb6e4f6 277 Pfam PF01569 PAP2 superfamily 122 251 5.1E-8 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS25795 85c519712715a9f85545b251afb6e4f6 277 SUPERFAMILY SSF48317 109 257 2.09E-9 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS25795 85c519712715a9f85545b251afb6e4f6 277 SUPERFAMILY SSF48317 56 82 2.09E-9 T 13-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PMA3_RS15940 c89af8893e4a3447d12ebe840c4c5c73 338 Pfam PF11740 Plasmid replication region DNA-binding N-term 9 118 4.9E-24 T 13-09-2016 IPR021104 KfrA, N-terminal DNA-binding domain PMA3_RS18615 627ac576953359482b34010b7f92cec3 737 Pfam PF12228 Protein of unknown function (DUF3604) 28 601 4.8E-218 T 13-09-2016 IPR022028 Protein of unknown function DUF3604 PMA3_RS11505 daa1f4158bbe2ff2200edd8f609fa058 1105 Pfam PF13699 Domain of unknown function (DUF4157) 80 156 1.3E-31 T 13-09-2016 IPR025295 Domain of unknown function DUF4157 PMA3_RS17365 e0c297335a54e28560c2da38a3b7a1b1 87 Pfam PF10976 Protein of unknown function (DUF2790) 23 84 1.8E-18 T 13-09-2016 IPR021245 Protein of unknown function DUF2790 PMA3_RS13360 9f2a6765703c88bbb6eecdb41c173bbb 89 Pfam PF07865 Protein of unknown function (DUF1652) 6 73 7.7E-27 T 13-09-2016 IPR012448 Protein of unknown function DUF1652 PMA3_RS06360 cdd1b59387eb36069b9b6319bb8f5416 327 Pfam PF01758 Sodium Bile acid symporter family 41 217 9.2E-15 T 13-09-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PMA3_RS16950 87bfc4617428cad21983deaed66a3962 168 Pfam PF10027 Predicted integral membrane protein (DUF2269) 5 153 5.6E-49 T 13-09-2016 IPR018729 Protein of unknown function DUF2269, transmembrane PMA3_RS01805 42da1d99c262b94338528e022587d13f 250 PIRSF PIRSF026326 3 236 3.1E-67 T 13-09-2016 IPR027023 Putative lipopolysaccharide kinase InaA PMA3_RS01805 42da1d99c262b94338528e022587d13f 250 SUPERFAMILY SSF56112 35 229 5.18E-10 T 13-09-2016 IPR011009 Protein kinase-like domain PMA3_RS01805 42da1d99c262b94338528e022587d13f 250 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 23 223 1.3E-55 T 13-09-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PMA3_RS17580 3321d28376b3be3bd7e2d3726ea699c2 144 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 25 139 8.9E-29 T 13-09-2016 IPR018893 Type VIII secretion system, CsgF PMA3_RS02450 7c68c9cb046421adc051a612a3dabb72 154 Pfam PF11162 Protein of unknown function (DUF2946) 23 151 1.2E-13 T 13-09-2016 IPR021333 Protein of unknown function DUF2946 PMA3_RS00085 007b76090011a08be63a259a6da02251 246 Pfam PF02104 SURF1 family 17 217 1.7E-29 T 13-09-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 PMA3_RS05165 891f8e67e7f9e48d82d2c9b01215d9f6 372 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 32 358 1.3E-22 T 13-09-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 PMA3_RS05165 891f8e67e7f9e48d82d2c9b01215d9f6 372 SUPERFAMILY SSF53187 17 111 8.6E-44 T 13-09-2016 PMA3_RS05165 891f8e67e7f9e48d82d2c9b01215d9f6 372 SUPERFAMILY SSF53187 146 363 8.6E-44 T 13-09-2016 PMA3_RS05165 891f8e67e7f9e48d82d2c9b01215d9f6 372 Gene3D G3DSA:3.40.630.10 17 250 1.0E-15 T 13-09-2016 PMA3_RS29730 8c5c953e9aebbb9be781f7866d1e6187 178 Pfam PF11736 Protein of unknown function (DUF3299) 25 171 1.8E-43 T 13-09-2016 IPR021727 Protein of unknown function DUF3299 PMA3_RS13960 40b68cf099c16c04c010619a93a69811 108 PANTHER PTHR38598 8 106 3.1E-30 T 13-09-2016 PMA3_RS13960 40b68cf099c16c04c010619a93a69811 108 Pfam PF04341 Protein of unknown function, DUF485 17 104 1.4E-30 T 13-09-2016 IPR007436 Protein of unknown function DUF485 PMA3_RS22795 81a72a878c18f3a44b37d42ae9b60f8a 339 Pfam PF16263 Domain of unknown function (DUF4917) 26 326 1.1E-56 T 13-09-2016 IPR032581 Protein of unknown function DUF4917 PMA3_RS21160 83939a13b95dd07e53c70b6ed63c6aa3 357 Pfam PF01594 Domain of unknown function DUF20 14 338 1.1E-60 T 13-09-2016 IPR002549 Transmembrane protein TqsA-like PMA3_RS21160 83939a13b95dd07e53c70b6ed63c6aa3 357 PANTHER PTHR21716 13 353 2.8E-65 T 13-09-2016 IPR002549 Transmembrane protein TqsA-like PMA3_RS22235 50466bec096c1ab54aa9fc8359795af3 177 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 25 160 4.0E-14 T 13-09-2016 IPR009936 Protein of unknown function DUF1468 PMA3_RS30265 a7a17f6ad1a2c9e9fe68d07dda669dfd 342 Pfam PF11141 Protein of unknown function (DUF2914) 268 333 2.2E-25 T 13-09-2016 IPR022606 Protein of unknown function DUF2914 PMA3_RS30265 a7a17f6ad1a2c9e9fe68d07dda669dfd 342 PIRSF PIRSF029727 1 342 7.2E-171 T 13-09-2016 IPR016937 Uncharacterised conserved protein UCP029727 PMA3_RS28045 38edad4f371c6077d4968d42d2621b1b 138 Pfam PF11215 Protein of unknown function (DUF3010) 1 133 1.6E-47 T 13-09-2016 IPR021378 Protein of unknown function DUF3010 PMA3_RS02995 5876f5637cac5bd20e38b642b281123f 151 Pfam PF16219 Domain of unknown function (DUF4879) 28 150 2.4E-44 T 13-09-2016 IPR032624 Protein of unknown function DUF4879 PMA3_RS20700 bb0bb49fc488b7236d565a5c97c77b3e 244 Pfam PF00117 Glutamine amidotransferase class-I 85 191 7.2E-12 T 13-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PMA3_RS20700 bb0bb49fc488b7236d565a5c97c77b3e 244 SUPERFAMILY SSF52317 3 208 8.28E-41 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS20700 bb0bb49fc488b7236d565a5c97c77b3e 244 PANTHER PTHR11922 1 203 9.1E-38 T 13-09-2016 PMA3_RS20700 bb0bb49fc488b7236d565a5c97c77b3e 244 Gene3D G3DSA:3.40.50.880 7 233 1.6E-43 T 13-09-2016 IPR029062 Class I glutamine amidotransferase-like PMA3_RS20700 bb0bb49fc488b7236d565a5c97c77b3e 244 PANTHER PTHR11922:SF34 1 203 9.1E-38 T 13-09-2016 PMA3_RS27955 c635633a861a3f3f93d2ab3ed5cf61dd 109 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 4 86 2.4E-39 T 13-09-2016 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PMA3_RS27955 c635633a861a3f3f93d2ab3ed5cf61dd 109 Pfam PF04267 Sarcosine oxidase, delta subunit family 4 84 5.6E-36 T 13-09-2016 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PMA3_RS17835 4fad7cc1aea34a44958e8905994a18dc 134 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 11 111 3.0E-20 T 13-09-2016 IPR020358 Uncharacterised protein family Y4oB PMA3_RS26455 fe0190f00bf44fa93c5be47459d88567 79 Pfam PF13438 Domain of unknown function (DUF4113) 27 76 1.2E-17 T 13-09-2016 IPR025188 Domain of unknown function DUF4113 PMA3_RS26425 92997f6267f010b08f14813c028e40d7 482 SUPERFAMILY SSF53067 125 164 1.59E-6 T 13-09-2016 PMA3_RS26425 92997f6267f010b08f14813c028e40d7 482 SUPERFAMILY SSF53067 46 76 1.59E-6 T 13-09-2016 PMA3_RS26425 92997f6267f010b08f14813c028e40d7 482 SUPERFAMILY SSF53067 228 404 1.59E-6 T 13-09-2016 PMA3_RS14020 a8e654d0972fd7ad71534a53fc9c2512 476 PANTHER PTHR31806 3 473 3.2E-90 T 13-09-2016 PMA3_RS14020 a8e654d0972fd7ad71534a53fc9c2512 476 PIRSF PIRSF002744 2 473 5.9E-108 T 13-09-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PMA3_RS14020 a8e654d0972fd7ad71534a53fc9c2512 476 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 24 449 1.5E-48 T 13-09-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PMA3_RS24850 bfbbb76179d6ce3941a36b9d0f510e16 597 Pfam PF06980 Protein of unknown function (DUF1302) 31 597 2.0E-212 T 13-09-2016 IPR010727 Protein of unknown function DUF1302 PMA3_RS29880 8d89da972d0731af590e6d2fd5910072 137 Pfam PF11743 Protein of unknown function (DUF3301) 8 101 9.0E-29 T 13-09-2016 IPR021732 Protein of unknown function DUF3301 PMA3_RS15145 f5affcfb1a7e9ac33b329e5557a70e70 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 77 1.6E-13 T 13-09-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PMA3_RS15145 f5affcfb1a7e9ac33b329e5557a70e70 97 SUPERFAMILY SSF54909 1 96 2.19E-17 T 13-09-2016 IPR011008 Dimeric alpha-beta barrel PMA3_RS15145 f5affcfb1a7e9ac33b329e5557a70e70 97 Gene3D G3DSA:3.30.70.900 2 93 5.4E-16 T 13-09-2016 PMA3_RS05235 4cfd7bb11eb6d9269ca0419dff43f7f2 154 Pfam PF05425 Copper resistance protein D 48 150 2.6E-16 T 13-09-2016 IPR008457 Copper resistance protein D GO:0016021 PMA3_RS21450 44b623f4527b36e03ef0f75cdeb87f79 147 Pfam PF06754 Phosphonate metabolism protein PhnG 7 145 6.9E-53 T 13-09-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 PMA3_RS21450 44b623f4527b36e03ef0f75cdeb87f79 147 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 7 146 3.3E-51 T 13-09-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 PMA3_RS18620 0fba3a4e0257b87678a685a311c5c78c 225 Pfam PF11769 Protein of unknown function (DUF3313) 17 218 1.9E-48 T 13-09-2016 IPR021747 Protein of unknown function DUF3313 PMA3_RS14065 47a38c2cdd15b7d2b93fcb02650b9aea 340 Pfam PF11168 Protein of unknown function (DUF2955) 11 150 1.8E-32 T 13-09-2016 IPR022604 Protein of unknown function DUF2955 PMA3_RS06650 601a8e62639ba65d8dca73d4b99c816d 118 Pfam PF07238 PilZ domain 17 106 1.0E-11 T 13-09-2016 IPR009875 PilZ domain GO:0035438 PMA3_RS24700 36eab33b6a5002d84930afa4658bff0c 66 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 1.4E-21 T 13-09-2016 IPR012451 Protein of unknown function DUF1656 PMA3_RS01205 6ffa03327f7110f26940b82b26798bf1 147 Pfam PF03692 Putative zinc- or iron-chelating domain 26 126 1.3E-14 T 13-09-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PMA3_RS15065 538b287565f11a4fd165ba3e0cf285d4 317 Pfam PF13557 Putative MetA-pathway of phenol degradation 70 311 3.4E-47 T 13-09-2016 IPR025737 MetA-pathway of phenol degradation, putative PMA3_RS00010 dafcfc9aef2cae6871b43bf78afc6aca 95 Pfam PF11191 Protein of unknown function (DUF2782) 20 95 7.3E-23 T 13-09-2016 IPR021357 Protein of unknown function DUF2782 PMA3_RS17140 f8a1643dabbd007253086a8483441710 176 SUPERFAMILY SSF54593 68 175 4.95E-16 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS17140 f8a1643dabbd007253086a8483441710 176 Gene3D G3DSA:3.10.180.10 60 175 1.0E-30 T 13-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PMA3_RS22775 ed5f1889431d493dda6621507d9e75ef 212 PANTHER PTHR30086 1 208 5.6E-21 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS22775 ed5f1889431d493dda6621507d9e75ef 212 Pfam PF01810 LysE type translocator 18 201 2.1E-22 T 13-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PMA3_RS04650 5ef4a3aade05e4d52dfbf9ae628cebed 137 Pfam PF14346 Domain of unknown function (DUF4398) 32 129 1.5E-26 T 13-09-2016 IPR025511 Domain of unknown function DUF4398 PMA3_RS04510 bcb94fe6263b0326a9b2d293c77d2f22 287 SUPERFAMILY SSF53850 29 264 8.69E-9 T 13-09-2016 PMA3_RS04510 bcb94fe6263b0326a9b2d293c77d2f22 287 TIGRFAM TIGR02285 TIGR02285: conserved hypothetical protein 7 273 1.2E-72 T 13-09-2016 IPR011972 Conserved hypothetical protein CHP02285 PMA3_RS18420 11c7a749326a70d83fbcbb17622ecd2a 139 Gene3D G3DSA:3.10.450.50 9 131 6.5E-17 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS18420 11c7a749326a70d83fbcbb17622ecd2a 139 Pfam PF12680 SnoaL-like domain 10 117 8.0E-17 T 13-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain PMA3_RS18420 11c7a749326a70d83fbcbb17622ecd2a 139 SUPERFAMILY SSF54427 1 128 7.99E-24 T 13-09-2016 IPR032710 NTF2-like domain PMA3_RS08835 721344cfdba652b57505a6cdc60f8fee 263 Gene3D G3DSA:3.90.1480.10 30 246 3.8E-17 T 13-09-2016 PMA3_RS08835 721344cfdba652b57505a6cdc60f8fee 263 ProDom PD024016 LIPOPOLYSACCHARIDE BIOSYNTHESIS CORE RFAZ WAAZ 31 259 4.0E-17 T 13-09-2016 PMA3_RS07675 8172bdde3a5eb803853fe2ee17a3b56a 160 SUPERFAMILY SSF54534 85 159 9.55E-8 T 13-09-2016 PMA3_RS07675 8172bdde3a5eb803853fe2ee17a3b56a 160 Gene3D G3DSA:3.10.50.30 82 159 1.2E-9 T 13-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PMA3_RS26840 8f548a1d2e4277ebe8082ffb99ee6db4 230 Pfam PF14335 Domain of unknown function (DUF4391) 15 224 1.2E-55 T 13-09-2016 IPR025503 Protein of unknown function DUF4391 PMA3_RS26750 49763c208419907720fed739136b81cc 482 Pfam PF13148 Protein of unknown function (DUF3987) 39 402 3.1E-84 T 13-09-2016 IPR025048 Protein of unknown function DUF3987) PMA3_RS29440 0934e76c23842b55e04c15fd6c806e7d 81 Pfam PF06568 Domain of unknown function (DUF1127) 38 71 3.4E-8 T 13-09-2016 IPR009506 Protein of unknown function DUF1127 PMA3_RS16220 49388aa0cf867386aba1e4dd76c26363 132 PIRSF PIRSF037181 1 131 1.5E-48 T 13-09-2016 IPR014958 DGC PMA3_RS16220 49388aa0cf867386aba1e4dd76c26363 132 Pfam PF08859 DGC domain 8 111 3.9E-30 T 13-09-2016 IPR014958 DGC PMA3_RS23985 75d4830bc5523700a0e02d51a10b0d43 164 Pfam PF04449 CS1 type fimbrial major subunit 67 155 5.8E-6 T 13-09-2016 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 PMA3_RS06450 c3334c0dded197229f598cfbf50791c0 113 Pfam PF12487 Protein of unknown function (DUF3703) 7 110 8.0E-30 T 13-09-2016 IPR022172 Protein of unknown function DUF3703 PMA3_RS02615 e864c9dcba524ac75e9a40a69d53abfc 260 Pfam PF13503 Domain of unknown function (DUF4123) 8 126 3.1E-14 T 13-09-2016 IPR025391 Domain of unknown function DUF4123 PMA3_RS23020 64f0ddcfe173bf481a621f886faeecc5 68 Pfam PF07869 Protein of unknown function (DUF1656) 5 60 3.0E-19 T 13-09-2016 IPR012451 Protein of unknown function DUF1656 PMA3_RS13460 110301b28c7b5a840f06e5e9150bb13b 66 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 1.7E-18 T 13-09-2016 IPR012451 Protein of unknown function DUF1656 PMA3_RS18550 6512822fff6d7512b0ba1cc23c1c8744 413 PANTHER PTHR34596 1 413 7.9E-164 T 13-09-2016 PMA3_RS18550 6512822fff6d7512b0ba1cc23c1c8744 413 Gene3D G3DSA:2.40.160.10 28 413 2.7E-144 T 13-09-2016 IPR023614 Porin domain PMA3_RS18550 6512822fff6d7512b0ba1cc23c1c8744 413 Pfam PF03573 outer membrane porin, OprD family 23 411 1.0E-147 T 13-09-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PMA3_RS12905 4b9ae2728ec491c2ceeeef7da5b7480d 116 SMART SM00749 23 86 4.5E-5 T 13-09-2016 IPR014004 Transport-associated and nodulation domain, bacteria PMA3_RS12905 4b9ae2728ec491c2ceeeef7da5b7480d 116 Pfam PF04972 BON domain 18 79 1.4E-14 T 13-09-2016 IPR007055 BON domain PMA3_RS14470 6df71f990d4099274a5f664ca5b07728 429 Pfam PF11862 Domain of unknown function (DUF3382) 8 100 9.1E-8 T 13-09-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal PMA3_RS14470 6df71f990d4099274a5f664ca5b07728 429 Pfam PF02653 Branched-chain amino acid transport system / permease component 114 398 1.1E-53 T 13-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PMA3_RS14470 6df71f990d4099274a5f664ca5b07728 429 PANTHER PTHR30482 62 413 1.9E-154 T 13-09-2016 PMA3_RS14470 6df71f990d4099274a5f664ca5b07728 429 PANTHER PTHR30482:SF9 62 413 1.9E-154 T 13-09-2016 PMA3_RS08055 e53bb8f3e47ebf836e00e31f6fac9a25 122 Pfam PF12778 PXPV repeat (3 copies) 75 88 0.0051 T 13-09-2016 IPR024446 PXPV repeat PMA3_RS26540 67e217b82eaea83d461e3359c7251096 54 Pfam PF03889 Domain of unknown function 10 40 7.1E-15 T 13-09-2016 IPR005589 Protein of unknown function DUF331 PMA3_RS15335 8fdfce8c04bd2ef61c36bb34b9d62319 316 Pfam PF08907 Domain of unknown function (DUF1853) 20 305 2.4E-103 T 13-09-2016 IPR015003 Protein of unknown function DUF1853 PMA3_RS12785 2d9ed6c9077a2b814aa76ce65383dfc9 223 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 28 210 3.9E-34 T 13-09-2016 IPR018728 Domain of unknown function DUF2268 PMA3_RS19850 fdd5524d280e59cbda16b21575c77128 1224 PANTHER PTHR36985 3 1224 8.4E-269 T 13-09-2016 PMA3_RS19850 fdd5524d280e59cbda16b21575c77128 1224 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 899 1224 1.6E-54 T 13-09-2016 IPR007452 Translocation and assembly module TamB PMA3_RS22495 03812375463bff64c5674e72e11f385e 372 Pfam PF06804 NlpB/DapX lipoprotein 36 369 2.3E-26 T 13-09-2016 IPR010653 NlpB/DapX lipoprotein PMA3_RS07135 7c7a538b369843f8d995f4285a6f0378 129 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 18 126 3.8E-18 T 13-09-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PMA3_RS22270 7fe0bf7548f1a16d486291ad92ecb5dc 76 Pfam PF13711 Domain of unknown function (DUF4160) 12 72 8.3E-14 T 13-09-2016 IPR025427 Protein of unknown function DUF4160 PMA3_RS11070 c2f03a463a10d328f5b8a100dd5b79bc 99 Pfam PF04267 Sarcosine oxidase, delta subunit family 3 79 4.0E-28 T 13-09-2016 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PMA3_RS00950 215615705a886339987e915095e53d04 97 Pfam PF11275 Protein of unknown function (DUF3077) 9 83 9.1E-34 T 13-09-2016 IPR021427 Protein of unknown function DUF3077 PMA3_RS14045 fed69a51e25e48a4c28757c145d4531d 154 Pfam PF13441 YMGG-like Gly-zipper 60 121 3.6E-9 T 13-09-2016 IPR027367 YMGG-like Gly-zipper PMA3_RS07695 6f24cb1095355044dbd4b6aa15d4e7d1 249 PANTHER PTHR30269 1 248 1.0E-46 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS07695 6f24cb1095355044dbd4b6aa15d4e7d1 249 Pfam PF01925 Sulfite exporter TauE/SafE 8 244 4.5E-42 T 13-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PMA3_RS26990 efc2eeb9b24b5ac931b143ab040a2f06 191 Pfam PF10986 Protein of unknown function (DUF2796) 32 186 2.3E-54 T 13-09-2016 IPR021253 Protein of unknown function DUF2796 PMA3_RS25770 30a7f42409b5a2a9838d134e78e13f3a 211 Pfam PF04367 Protein of unknown function (DUF502) 60 150 1.1E-5 T 13-09-2016 IPR007462 Protein of unknown function DUF502 PMA3_RS18970 27062af352b86a05626439f24d735d84 63 Gene3D G3DSA:2.40.160.60 22 53 3.3E-6 T 13-09-2016 PMA3_RS10860 e466662a5b7432738ca8457b71e4d3a9 145 Pfam PF13160 Protein of unknown function (DUF3995) 13 138 1.1E-32 T 13-09-2016 IPR025058 Protein of unknown function DUF3995 PMA3_RS13605 4b411c0cadc48563100d13d22889f217 248 Pfam PF03692 Putative zinc- or iron-chelating domain 9 118 2.6E-10 T 13-09-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PMA3_RS17345 01609ad0ddcea997c36482bc5af4fc41 89 Pfam PF14026 Protein of unknown function (DUF4242) 4 79 9.0E-29 T 13-09-2016 IPR025336 Protein of unknown function DUF4242 PMA3_RS24635 df79278f1f5f3ee9cb4b7555ee3ac209 482 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 64 330 8.0E-87 T 13-09-2016 IPR031811 AlgX, SGNH hydrolase-like domain KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 PMA3_RS24635 df79278f1f5f3ee9cb4b7555ee3ac209 482 Pfam PF16824 C-terminal carbohydrate-binding module 351 477 1.1E-59 T 13-09-2016 IPR031798 Alginate biosynthesis protein AlgX, C-terminal carbohydrate-binding module KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 PMA3_RS03340 45378444d3615f805162a61a57bb4992 57 Pfam PF11293 Protein of unknown function (DUF3094) 2 56 4.5E-34 T 13-09-2016 IPR021444 Protein of unknown function DUF3094 PMA3_RS13005 4e1a690fbdd640533b8f302ae3f14e83 225 Pfam PF12261 Thermostable hemolysin 29 199 1.1E-61 T 13-09-2016 IPR022050 Thermostable hemolysin PMA3_RS25290 2c798727346fd2bc57b4b0f775545cf3 238 Pfam PF04402 Protein of unknown function (DUF541) 35 228 1.4E-27 T 13-09-2016 IPR007497 Protein of unknown function DUF541 PMA3_RS13280 6bf940e89859611c8b8e1aa90812f963 142 PANTHER PTHR12962:SF1 47 134 1.9E-27 T 13-09-2016 PMA3_RS13280 6bf940e89859611c8b8e1aa90812f963 142 Pfam PF06961 Protein of unknown function (DUF1294) 61 113 1.4E-24 T 13-09-2016 IPR010718 Protein of unknown function DUF1294 PMA3_RS13280 6bf940e89859611c8b8e1aa90812f963 142 PANTHER PTHR12962 47 134 1.9E-27 T 13-09-2016 PMA3_RS19960 b13ad40db2fba8e5f24258840473c19d 107 Pfam PF03413 Peptidase propeptide and YPEB domain 46 104 7.9E-11 T 13-09-2016 IPR025711 PepSY domain PMA3_RS29915 2bafa2bec39fe8ff18f7fbba8b0b9e0b 173 Pfam PF12276 Protein of unknown function (DUF3617) 1 167 1.9E-39 T 13-09-2016 IPR022061 Protein of unknown function DUF3617 PMA3_RS02860 d203f1d8e9a14496b73a276fdc4ded45 253 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 250 1.6E-67 T 13-09-2016 IPR018648 Protein of unknown function DUF2076 PMA3_RS06635 bd1510c8f3f2b44ecb6ca0c8110660ff 257 Gene3D G3DSA:3.40.50.300 159 247 3.6E-22 T 13-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PMA3_RS18900 6c6e67872d973105ce9645a4de9e7310 409 SUPERFAMILY SSF56935 46 380 3.11E-9 T 13-09-2016 PMA3_RS18610 93083261368bc677fc492ecc01649f18 332 Pfam PF13795 HupE / UreJ protein 145 294 5.4E-46 T 13-09-2016 IPR032809 Putative HupE/UreJ protein PMA3_RS25990 9392779c258945428ee81e8ba3787149 292 Gene3D G3DSA:1.10.3290.10 76 198 9.8E-11 T 13-09-2016 IPR003812 Fido domain PMA3_RS25990 9392779c258945428ee81e8ba3787149 292 SUPERFAMILY SSF140931 91 197 1.57E-7 T 13-09-2016 IPR003812 Fido domain PMA3_RS28500 d31e36de8167da67a7b6803467c35b08 144 Pfam PF14467 Domain of unknown function (DUF4426) 29 142 1.6E-43 T 13-09-2016 IPR025218 Domain of unknown function DUF4426 PMA3_RS24350 b32dadcc8d9e5d6f9528b1fb8cee133b 102 Pfam PF11275 Protein of unknown function (DUF3077) 9 83 1.6E-26 T 13-09-2016 IPR021427 Protein of unknown function DUF3077 PMA3_RS17120 90a0444e0169723e1d2ca2fdd9671012 143 SUPERFAMILY SSF48150 27 136 2.98E-8 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS17120 90a0444e0169723e1d2ca2fdd9671012 143 Gene3D G3DSA:1.10.340.30 28 135 5.5E-6 T 13-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PMA3_RS15115 e450ce2a7fc5a12820ff7055bf63b1c3 223 Pfam PF11769 Protein of unknown function (DUF3313) 17 213 2.2E-58 T 13-09-2016 IPR021747 Protein of unknown function DUF3313 PMA3_RS02345 5d61ec088fcbe80e1ca51472392184cb 101 Pfam PF07769 psiF repeat 23 55 1.0E-19 T 13-09-2016 IPR011690 Phosphate-starvation-induced PsiF repeat PMA3_RS02345 5d61ec088fcbe80e1ca51472392184cb 101 Pfam PF07769 psiF repeat 67 99 6.2E-20 T 13-09-2016 IPR011690 Phosphate-starvation-induced PsiF repeat PMA3_RS12685 18c3d5d5782e2b2dfb57593d102e0f3d 62 Gene3D G3DSA:1.20.140.10 11 55 3.6E-14 T 13-09-2016 PMA3_RS11490 aebc94b55a3f3681fdb7331517a57aa0 436 Pfam PF14065 Protein of unknown function (DUF4255) 12 205 7.0E-40 T 13-09-2016 IPR025351 Protein of unknown function DUF4255 PMA3_RS05910 d8de1aff20a9623f0b5700c56c775ec6 134 Pfam PF03724 META domain 26 127 3.6E-27 T 13-09-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ PMA3_RS05910 d8de1aff20a9623f0b5700c56c775ec6 134 PANTHER PTHR35535 18 130 4.6E-23 T 13-09-2016 PMA3_RS29540 d1db352df99696dbf9636c6c7da78da0 122 Pfam PF09685 Domain of unknown function (DUF4870) 16 121 2.1E-38 T 13-09-2016 IPR019109 Protein of unknown function DUF4870 PMA3_RS04735 3a10d233b8c242a627d8ac9c2cd2856a 115 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 9 100 1.0E-5 T 13-09-2016 PMA3_RS23935 edf54be02afe4f046d94f893ea2a8500 564 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 68 227 1.3E-9 T 13-09-2016 PMA3_RS29045 6885c4c637a12b80432aa27a8ec685b3 69 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 5 69 2.3E-30 T 13-09-2016 IPR012662 Conserved hypothetical protein CHP02449 PMA3_RS04215 af97a6e89214165313c47b8bb87bb40c 249 Pfam PF03692 Putative zinc- or iron-chelating domain 7 111 2.9E-11 T 13-09-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PMA3_RS08000 b05429166519d383b1fb545693c607a2 542 Pfam PF11394 Protein of unknown function (DUF2875) 86 535 1.4E-208 T 13-09-2016 IPR021531 Protein of unknown function DUF2875 PMA3_RS01175 f069c3ac89e825a7a40e09658a22e355 206 Pfam PF13511 Domain of unknown function (DUF4124) 6 58 5.7E-11 T 13-09-2016 IPR025392 Domain of unknown function DUF4124 PMA3_RS03125 8d8c7d21acdf14ee8194ddad3244ae6b 162 Pfam PF11220 Protein of unknown function (DUF3015) 19 158 2.8E-55 T 13-09-2016 IPR021383 Protein of unknown function DUF3015 PMA3_RS19780 8772963194d9b2e973fae3a55fe7884e 90 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 3 90 8.7E-39 T 13-09-2016 IPR018678 Protein of unknown function DUF2160, transmembrane PMA3_RS20270 d7a79c9f58c628279db87790e509ae28 84 Pfam PF07865 Protein of unknown function (DUF1652) 6 71 3.5E-16 T 13-09-2016 IPR012448 Protein of unknown function DUF1652