locus-tag class description HKK55_RS00030 PF17946 RecC C-terminal domain HKK55_RS00035 PF00580 UvrD/REP helicase N-terminal domain HKK55_RS00035 PF13361 UvrD-like helicase C-terminal domain HKK55_RS00035 PF12705 PD-(D/E)XK nuclease superfamily HKK55_RS00040 PF13538 UvrD-like helicase C-terminal domain HKK55_RS00050 PF17152 Periplasmic sensor domain HKK55_RS00050 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS00060 PF03466 LysR substrate binding domain HKK55_RS00060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS00065 PF00171 Aldehyde dehydrogenase family HKK55_RS00070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HKK55_RS00070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HKK55_RS00105 PF02321 Outer membrane efflux protein HKK55_RS00110 PF03412 Peptidase C39 family HKK55_RS00110 PF00664 ABC transporter transmembrane region HKK55_RS00110 PF00005 ABC transporter HKK55_RS00115 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS00125 PF01225 Mur ligase family, catalytic domain HKK55_RS00125 PF08245 Mur ligase middle domain HKK55_RS00125 PF02875 Mur ligase family, glutamate ligase domain HKK55_RS00140 PF04199 Putative cyclase HKK55_RS00145 PF03301 Tryptophan 2,3-dioxygenase HKK55_RS00150 PF00324 Amino acid permease HKK55_RS00155 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS00155 PF00175 Oxidoreductase NAD-binding domain HKK55_RS00155 PF00970 Oxidoreductase FAD-binding domain HKK55_RS00160 PF00866 Ring hydroxylating beta subunit HKK55_RS00165 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HKK55_RS00165 PF00355 Rieske [2Fe-2S] domain HKK55_RS00170 PF12833 Helix-turn-helix domain HKK55_RS00175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS00175 PF03466 LysR substrate binding domain HKK55_RS00180 PF13378 Enolase C-terminal domain-like HKK55_RS00180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HKK55_RS00185 PF02426 Muconolactone delta-isomerase HKK55_RS00190 PF00775 Dioxygenase HKK55_RS00190 PF04444 Catechol dioxygenase N terminus HKK55_RS00195 PF01037 Lrp/AsnC ligand binding domain HKK55_RS00200 PF00266 Aminotransferase class-V HKK55_RS00205 PF00324 Amino acid permease HKK55_RS00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS00210 PF03466 LysR substrate binding domain HKK55_RS00225 PF02525 Flavodoxin-like fold HKK55_RS00230 PF03466 LysR substrate binding domain HKK55_RS00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS00240 PF01740 STAS domain HKK55_RS00240 PF00916 Sulfate permease family HKK55_RS00250 PF02447 GntP family permease HKK55_RS00255 PF02685 Glucokinase HKK55_RS00255 PF01418 Helix-turn-helix domain, rpiR family HKK55_RS00255 PF01380 SIS domain HKK55_RS00260 PF07969 Amidohydrolase family HKK55_RS00275 PF16591 Helical bimodular sensor domain HKK55_RS00275 PF00672 HAMP domain HKK55_RS00275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS00295 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS00295 PF03473 MOSC domain HKK55_RS00295 PF03476 MOSC N-terminal beta barrel domain HKK55_RS00300 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS00300 PF00155 Aminotransferase class I and II HKK55_RS00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS00310 PF03466 LysR substrate binding domain HKK55_RS00365 PF02652 L-lactate permease HKK55_RS00370 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS00370 PF07729 FCD domain HKK55_RS00375 PF01668 SmpB protein HKK55_RS00380 PF00209 Sodium:neurotransmitter symporter family HKK55_RS00385 PF03364 Polyketide cyclase / dehydrase and lipid transport HKK55_RS00390 PF03658 RnfH family Ubiquitin HKK55_RS00395 PF04355 SmpA / OmlA family HKK55_RS00400 PF01475 Ferric uptake regulator family HKK55_RS00405 PF02463 RecF/RecN/SMC N terminal domain HKK55_RS00410 PF01025 GrpE HKK55_RS00415 PF00012 Hsp70 protein HKK55_RS00420 PF00226 DnaJ domain HKK55_RS00420 PF01556 DnaJ C terminal domain HKK55_RS00420 PF00684 DnaJ central domain HKK55_RS00425 PF05173 Dihydrodipicolinate reductase, C-terminus HKK55_RS00425 PF01113 Dihydrodipicolinate reductase, N-terminus HKK55_RS00430 PF00117 Glutamine amidotransferase class-I HKK55_RS00430 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HKK55_RS00435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKK55_RS00435 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HKK55_RS00435 PF02142 MGS-like domain HKK55_RS00440 PF01272 Transcription elongation factor, GreA/GreB, C-term HKK55_RS00440 PF03449 Transcription elongation factor, N-terminal HKK55_RS00450 PF01985 CRS1 / YhbY (CRM) domain HKK55_RS00455 PF01728 FtsJ-like methyltransferase HKK55_RS00460 PF06480 FtsH Extracellular HKK55_RS00460 PF17862 AAA+ lid domain HKK55_RS00460 PF00004 ATPase family associated with various cellular activities (AAA) HKK55_RS00460 PF01434 Peptidase family M41 HKK55_RS00465 PF00809 Pterin binding enzyme HKK55_RS00470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKK55_RS00470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKK55_RS00470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKK55_RS00470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKK55_RS00475 PF00121 Triosephosphate isomerase HKK55_RS00480 PF03840 Preprotein translocase SecG subunit HKK55_RS00495 PF02576 RimP N-terminal domain HKK55_RS00495 PF17384 RimP C-terminal SH3 domain HKK55_RS00500 PF00575 S1 RNA binding domain HKK55_RS00500 PF13184 NusA-like KH domain HKK55_RS00500 PF08529 NusA N-terminal domain HKK55_RS00505 PF08364 Bacterial translation initiation factor IF-2 associated region HKK55_RS00505 PF11987 Translation-initiation factor 2 HKK55_RS00505 PF04760 Translation initiation factor IF-2, N-terminal region HKK55_RS00505 PF00009 Elongation factor Tu GTP binding domain HKK55_RS00510 PF02033 Ribosome-binding factor A HKK55_RS00515 PF01509 TruB family pseudouridylate synthase (N terminal domain) HKK55_RS00515 PF16198 tRNA pseudouridylate synthase B C-terminal domain HKK55_RS00515 PF09157 Pseudouridine synthase II TruB, C-terminal HKK55_RS00520 PF00312 Ribosomal protein S15 HKK55_RS00525 PF03725 3' exoribonuclease family, domain 2 HKK55_RS00525 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HKK55_RS00525 PF01138 3' exoribonuclease family, domain 1 HKK55_RS00525 PF00013 KH domain HKK55_RS00525 PF00575 S1 RNA binding domain HKK55_RS00530 PF04972 BON domain HKK55_RS00540 PF17785 PUA-like domain HKK55_RS00540 PF10672 S-adenosylmethionine-dependent methyltransferase HKK55_RS00550 PF00501 AMP-binding enzyme HKK55_RS00550 PF16177 Acetyl-coenzyme A synthetase N-terminus HKK55_RS00550 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS00555 PF00342 Phosphoglucose isomerase HKK55_RS00560 PF02569 Pantoate-beta-alanine ligase HKK55_RS00565 PF02548 Ketopantoate hydroxymethyltransferase HKK55_RS00570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HKK55_RS00575 PF12627 Probable RNA and SrmB- binding site of polymerase A HKK55_RS00575 PF12626 Polymerase A arginine-rich C-terminus HKK55_RS00575 PF01743 Poly A polymerase head domain HKK55_RS00580 PF02954 Bacterial regulatory protein, Fis family HKK55_RS00580 PF00158 Sigma-54 interaction domain HKK55_RS00580 PF00072 Response regulator receiver domain HKK55_RS00585 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS00585 PF08447 PAS fold HKK55_RS00585 PF00989 PAS fold HKK55_RS00585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS00595 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKK55_RS00600 PF01258 Prokaryotic dksA/traR C4-type zinc finger HKK55_RS00605 PF00155 Aminotransferase class I and II HKK55_RS00610 PF03749 Sugar fermentation stimulation protein RE domain HKK55_RS00610 PF17746 SfsA N-terminal OB domain HKK55_RS00620 PF01497 Periplasmic binding protein HKK55_RS00625 PF01032 FecCD transport family HKK55_RS00630 PF00005 ABC transporter HKK55_RS00650 PF14814 Bifunctional transglycosylase second domain HKK55_RS00650 PF00912 Transglycosylase HKK55_RS00650 PF00905 Penicillin binding protein transpeptidase domain HKK55_RS00660 PF04287 tRNA pseudouridine synthase C HKK55_RS00665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKK55_RS00665 PF00205 Thiamine pyrophosphate enzyme, central domain HKK55_RS00665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKK55_RS00670 PF10369 Small subunit of acetolactate synthase HKK55_RS00675 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HKK55_RS00675 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HKK55_RS00680 PF01066 CDP-alcohol phosphatidyltransferase HKK55_RS00685 PF00174 Oxidoreductase molybdopterin binding domain HKK55_RS00690 PF01794 Ferric reductase like transmembrane component HKK55_RS00720 PF04403 Paraquat-inducible protein A HKK55_RS00725 PF04403 Paraquat-inducible protein A HKK55_RS00730 PF02470 MlaD protein HKK55_RS00755 PF00583 Acetyltransferase (GNAT) family HKK55_RS00765 PF00484 Carbonic anhydrase HKK55_RS00780 PF04185 Phosphoesterase family HKK55_RS00785 PF02667 Short chain fatty acid transporter HKK55_RS00800 PF07690 Major Facilitator Superfamily HKK55_RS00800 PF00083 Sugar (and other) transporter HKK55_RS00805 PF02447 GntP family permease HKK55_RS00810 PF01545 Cation efflux family HKK55_RS00815 PF00072 Response regulator receiver domain HKK55_RS00815 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS00820 PF02321 Outer membrane efflux protein HKK55_RS00825 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS00825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS00830 PF00873 AcrB/AcrD/AcrF family HKK55_RS00845 PF03573 outer membrane porin, OprD family HKK55_RS00855 PF08447 PAS fold HKK55_RS00855 PF13426 PAS domain HKK55_RS00855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS00865 PF01613 Flavin reductase like domain HKK55_RS00885 PF07478 D-ala D-ala ligase C-terminus HKK55_RS00885 PF01820 D-ala D-ala ligase N-terminus HKK55_RS00975 PF00589 Phage integrase family HKK55_RS00975 PF13356 Arm DNA-binding domain HKK55_RS00975 PF14659 Phage integrase, N-terminal SAM-like domain HKK55_RS00990 PF07690 Major Facilitator Superfamily HKK55_RS00995 PF04542 Sigma-70 region 2 HKK55_RS00995 PF08281 Sigma-70, region 4 HKK55_RS01005 PF00813 FliP family HKK55_RS01015 PF01312 FlhB HrpN YscU SpaS Family HKK55_RS01030 PF00263 Bacterial type II and III secretion system protein HKK55_RS01030 PF03958 Bacterial type II/III secretion system short domain HKK55_RS01055 PF01514 Secretory protein of YscJ/FliF family HKK55_RS01070 PF00158 Sigma-54 interaction domain HKK55_RS01070 PF02954 Bacterial regulatory protein, Fis family HKK55_RS01075 PF01926 50S ribosome-binding GTPase HKK55_RS01075 PF06071 Protein of unknown function (DUF933) HKK55_RS01080 PF01195 Peptidyl-tRNA hydrolase HKK55_RS01085 PF01386 Ribosomal L25p family HKK55_RS01085 PF14693 Ribosomal protein TL5, C-terminal domain HKK55_RS01090 PF14572 Phosphoribosyl synthetase-associated domain HKK55_RS01090 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HKK55_RS01100 PF00288 GHMP kinases N terminal domain HKK55_RS01100 PF08544 GHMP kinases C terminal HKK55_RS01105 PF03550 Outer membrane lipoprotein LolB HKK55_RS01115 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HKK55_RS01115 PF01488 Shikimate / quinate 5-dehydrogenase HKK55_RS01115 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HKK55_RS01120 PF03462 PCRF domain HKK55_RS01120 PF00472 RF-1 domain HKK55_RS01125 PF05175 Methyltransferase small domain HKK55_RS01125 PF17827 PrmC N-terminal domain HKK55_RS01130 PF00899 ThiF family HKK55_RS01135 PF01177 Asp/Glu/Hydantoin racemase HKK55_RS01145 PF00106 short chain dehydrogenase HKK55_RS01150 PF00875 DNA photolyase HKK55_RS01150 PF03441 FAD binding domain of DNA photolyase HKK55_RS01155 PF13411 MerR HTH family regulatory protein HKK55_RS01165 PF01593 Flavin containing amine oxidoreductase HKK55_RS01170 PF08338 Domain of unknown function (DUF1731) HKK55_RS01170 PF01370 NAD dependent epimerase/dehydratase family HKK55_RS01175 PF00762 Ferrochelatase HKK55_RS01185 PF00593 TonB dependent receptor HKK55_RS01185 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS01190 PF13180 PDZ domain HKK55_RS01195 PF01784 NIF3 (NGG1p interacting factor 3) HKK55_RS01200 PF01507 Phosphoadenosine phosphosulfate reductase family HKK55_RS01205 PF00009 Elongation factor Tu GTP binding domain HKK55_RS01210 PF01553 Acyltransferase HKK55_RS01215 PF01515 Phosphate acetyl/butaryl transferase HKK55_RS01215 PF07085 DRTGG domain HKK55_RS01225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK55_RS01230 PF00255 Glutathione peroxidase HKK55_RS01235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK55_RS01235 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS01240 PF00534 Glycosyl transferases group 1 HKK55_RS01240 PF13439 Glycosyltransferase Family 4 HKK55_RS01250 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS01265 PF02152 Dihydroneopterin aldolase HKK55_RS01270 PF01227 GTP cyclohydrolase I HKK55_RS01285 PF13411 MerR HTH family regulatory protein HKK55_RS01295 PF13426 PAS domain HKK55_RS01295 PF01740 STAS domain HKK55_RS01300 PF00258 Flavodoxin HKK55_RS01305 PF00596 Class II Aldolase and Adducin N-terminal domain HKK55_RS01310 PF00561 alpha/beta hydrolase fold HKK55_RS01315 PF00106 short chain dehydrogenase HKK55_RS01325 PF07044 Protein of unknown function (DUF1329) HKK55_RS01330 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS01330 PF00072 Response regulator receiver domain HKK55_RS01340 PF04209 homogentisate 1,2-dioxygenase HKK55_RS01345 PF01557 Fumarylacetoacetate (FAA) hydrolase family HKK55_RS01350 PF13417 Glutathione S-transferase, N-terminal domain HKK55_RS01355 PF07690 Major Facilitator Superfamily HKK55_RS01360 PF13369 Transglutaminase-like superfamily HKK55_RS01365 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HKK55_RS01365 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HKK55_RS01380 PF06146 Phosphate-starvation-inducible E HKK55_RS01395 PF03315 Serine dehydratase beta chain HKK55_RS01395 PF03313 Serine dehydratase alpha chain HKK55_RS01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS01400 PF03466 LysR substrate binding domain HKK55_RS01410 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS01410 PF00593 TonB dependent receptor HKK55_RS01410 PF07660 Secretin and TonB N terminus short domain HKK55_RS01415 PF04773 FecR protein HKK55_RS01415 PF16220 Domain of unknown function (DUF4880) HKK55_RS01420 PF04542 Sigma-70 region 2 HKK55_RS01420 PF08281 Sigma-70, region 4 HKK55_RS01455 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS01465 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HKK55_RS01470 PF12833 Helix-turn-helix domain HKK55_RS01475 PF00892 EamA-like transporter family HKK55_RS01480 PF00158 Sigma-54 interaction domain HKK55_RS01480 PF02954 Bacterial regulatory protein, Fis family HKK55_RS01485 PF00042 Globin HKK55_RS01485 PF00175 Oxidoreductase NAD-binding domain HKK55_RS01485 PF00970 Oxidoreductase FAD-binding domain HKK55_RS01490 PF02600 Disulfide bond formation protein DsbB HKK55_RS01495 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HKK55_RS01495 PF06481 COX Aromatic Rich Motif HKK55_RS01500 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKK55_RS01505 PF00510 Cytochrome c oxidase subunit III HKK55_RS01510 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HKK55_RS01515 PF01040 UbiA prenyltransferase family HKK55_RS01520 PF02371 Transposase IS116/IS110/IS902 family HKK55_RS01520 PF01548 Transposase HKK55_RS01525 PF06508 Queuosine biosynthesis protein QueC HKK55_RS01540 PF00464 Serine hydroxymethyltransferase HKK55_RS01550 PF00732 GMC oxidoreductase HKK55_RS01550 PF05199 GMC oxidoreductase HKK55_RS01555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS01555 PF00034 Cytochrome c HKK55_RS01570 PF00034 Cytochrome c HKK55_RS01570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS01575 PF01266 FAD dependent oxidoreductase HKK55_RS01580 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS01585 PF00005 ABC transporter HKK55_RS01595 PF00202 Aminotransferase class-III HKK55_RS01600 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS01605 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS01605 PF08448 PAS fold HKK55_RS01625 PF04333 MlaA lipoprotein HKK55_RS01630 PF00072 Response regulator receiver domain HKK55_RS01630 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS01635 PF00672 HAMP domain HKK55_RS01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS01635 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS01645 PF00583 Acetyltransferase (GNAT) family HKK55_RS01650 PF00034 Cytochrome c HKK55_RS01655 PF00445 Ribonuclease T2 family HKK55_RS01675 PF00072 Response regulator receiver domain HKK55_RS01675 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS01680 PF08521 Two-component sensor kinase N-terminal HKK55_RS01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS01680 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS01705 PF08000 Bacterial PH domain HKK55_RS01720 PF02547 Queuosine biosynthesis protein HKK55_RS01725 PF01702 Queuine tRNA-ribosyltransferase HKK55_RS01730 PF02699 Preprotein translocase subunit HKK55_RS01735 PF13721 SecD export protein N-terminal TM region HKK55_RS01735 PF07549 SecD/SecF GG Motif HKK55_RS01735 PF02355 Protein export membrane protein HKK55_RS01740 PF02355 Protein export membrane protein HKK55_RS01740 PF07549 SecD/SecF GG Motif HKK55_RS01745 PF05433 Glycine zipper 2TM domain HKK55_RS01750 PF00459 Inositol monophosphatase family HKK55_RS01755 PF00588 SpoU rRNA Methylase family HKK55_RS01760 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS01760 PF06426 Serine acetyltransferase, N-terminal HKK55_RS01765 PF02082 Transcriptional regulator HKK55_RS01770 PF00266 Aminotransferase class-V HKK55_RS01775 PF01592 NifU-like N terminal domain HKK55_RS01780 PF01521 Iron-sulphur cluster biosynthesis HKK55_RS01785 PF07743 HSCB C-terminal oligomerisation domain HKK55_RS01785 PF00226 DnaJ domain HKK55_RS01790 PF00012 Hsp70 protein HKK55_RS01795 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS01800 PF04384 Iron-sulphur cluster assembly HKK55_RS01805 PF00334 Nucleoside diphosphate kinase HKK55_RS01810 PF04055 Radical SAM superfamily HKK55_RS01825 PF04551 GcpE protein HKK55_RS01830 PF13393 Histidyl-tRNA synthetase HKK55_RS01830 PF03129 Anticodon binding domain HKK55_RS01840 PF13360 PQQ-like domain HKK55_RS01845 PF01926 50S ribosome-binding GTPase HKK55_RS01845 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HKK55_RS01850 PF00155 Aminotransferase class I and II HKK55_RS01855 PF00795 Carbon-nitrogen hydrolase HKK55_RS01860 PF00682 HMGL-like HKK55_RS01860 PF08502 LeuA allosteric (dimerisation) domain HKK55_RS01865 PF01551 Peptidase family M23 HKK55_RS01865 PF08525 Opacity-associated protein A N-terminal motif HKK55_RS01865 PF01476 LysM domain HKK55_RS01870 PF02601 Exonuclease VII, large subunit HKK55_RS01870 PF13742 OB-fold nucleic acid binding domain HKK55_RS01875 PF03466 LysR substrate binding domain HKK55_RS01875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS01890 PF00571 CBS domain HKK55_RS01890 PF00478 IMP dehydrogenase / GMP reductase domain HKK55_RS01895 PF00117 Glutamine amidotransferase class-I HKK55_RS01895 PF00958 GMP synthase C terminal domain HKK55_RS01895 PF02540 NAD synthase HKK55_RS01905 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS01905 PF07702 UTRA domain HKK55_RS01910 PF00367 phosphotransferase system, EIIB HKK55_RS01910 PF02378 Phosphotransferase system, EIIC HKK55_RS01915 PF00128 Alpha amylase, catalytic domain HKK55_RS01915 PF16657 Maltogenic Amylase, C-terminal domain HKK55_RS01920 PF02264 LamB porin HKK55_RS01925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HKK55_RS01925 PF00381 PTS HPr component phosphorylation site HKK55_RS01925 PF05524 PEP-utilising enzyme, N-terminal HKK55_RS01925 PF00391 PEP-utilising enzyme, mobile domain HKK55_RS01925 PF02896 PEP-utilising enzyme, TIM barrel domain HKK55_RS01930 PF00367 phosphotransferase system, EIIB HKK55_RS01930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HKK55_RS01935 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS01935 PF01464 Transglycosylase SLT domain HKK55_RS01940 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HKK55_RS01940 PF02769 AIR synthase related protein, C-terminal domain HKK55_RS01940 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HKK55_RS01945 PF01784 NIF3 (NGG1p interacting factor 3) HKK55_RS01955 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HKK55_RS01955 PF00367 phosphotransferase system, EIIB HKK55_RS01955 PF02378 Phosphotransferase system, EIIC HKK55_RS01960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HKK55_RS01960 PF00381 PTS HPr component phosphorylation site HKK55_RS01960 PF05524 PEP-utilising enzyme, N-terminal HKK55_RS01960 PF02896 PEP-utilising enzyme, TIM barrel domain HKK55_RS01960 PF00391 PEP-utilising enzyme, mobile domain HKK55_RS01965 PF01380 SIS domain HKK55_RS01970 PF01979 Amidohydrolase family HKK55_RS01975 PF07702 UTRA domain HKK55_RS01975 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS01985 PF09297 NADH pyrophosphatase zinc ribbon domain HKK55_RS01985 PF00293 NUDIX domain HKK55_RS01990 PF00293 NUDIX domain HKK55_RS01995 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS02010 PF02222 ATP-grasp domain HKK55_RS02015 PF00083 Sugar (and other) transporter HKK55_RS02015 PF07690 Major Facilitator Superfamily HKK55_RS02020 PF03471 Transporter associated domain HKK55_RS02020 PF00571 CBS domain HKK55_RS02020 PF01595 Cyclin M transmembrane N-terminal domain HKK55_RS02030 PF02881 SRP54-type protein, helical bundle domain HKK55_RS02030 PF00448 SRP54-type protein, GTPase domain HKK55_RS02030 PF02978 Signal peptide binding domain HKK55_RS02035 PF00886 Ribosomal protein S16 HKK55_RS02040 PF05239 PRC-barrel domain HKK55_RS02040 PF01782 RimM N-terminal domain HKK55_RS02045 PF01746 tRNA (Guanine-1)-methyltransferase HKK55_RS02050 PF01245 Ribosomal protein L19 HKK55_RS02055 PF02080 TrkA-C domain HKK55_RS02055 PF00999 Sodium/hydrogen exchanger family HKK55_RS02055 PF03471 Transporter associated domain HKK55_RS02060 PF02899 Phage integrase, N-terminal SAM-like domain HKK55_RS02060 PF00589 Phage integrase family HKK55_RS02065 PF10411 Disulfide bond isomerase protein N-terminus HKK55_RS02065 PF13098 Thioredoxin-like domain HKK55_RS02070 PF00742 Homoserine dehydrogenase HKK55_RS02070 PF01842 ACT domain HKK55_RS02070 PF03447 Homoserine dehydrogenase, NAD binding domain HKK55_RS02075 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS02075 PF14821 Threonine synthase N terminus HKK55_RS02080 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS02080 PF01627 Hpt domain HKK55_RS02080 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS02080 PF00989 PAS fold HKK55_RS02080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS02080 PF00072 Response regulator receiver domain HKK55_RS02085 PF13426 PAS domain HKK55_RS02085 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS02085 PF00563 EAL domain HKK55_RS02090 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS02090 PF00072 Response regulator receiver domain HKK55_RS02110 PF02515 CoA-transferase family III HKK55_RS02115 PF07152 YaeQ protein HKK55_RS02120 PF01368 DHH family HKK55_RS02120 PF02272 DHHA1 domain HKK55_RS02120 PF17768 RecJ OB domain HKK55_RS02125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK55_RS02135 PF04349 Periplasmic glucan biosynthesis protein, MdoG HKK55_RS02145 PF00672 HAMP domain HKK55_RS02145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS02145 PF12729 Four helix bundle sensory module for signal transduction HKK55_RS02155 PF01739 CheR methyltransferase, SAM binding domain HKK55_RS02165 PF01584 CheW-like domain HKK55_RS02165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS02165 PF01627 Hpt domain HKK55_RS02165 PF00072 Response regulator receiver domain HKK55_RS02170 PF01339 CheB methylesterase HKK55_RS02170 PF00072 Response regulator receiver domain HKK55_RS02175 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS02175 PF01590 GAF domain HKK55_RS02175 PF00563 EAL domain HKK55_RS02175 PF00360 Phytochrome region HKK55_RS02185 PF00152 tRNA synthetases class II (D, K and N) HKK55_RS02185 PF01336 OB-fold nucleic acid binding domain HKK55_RS02200 PF12146 Serine aminopeptidase, S33 HKK55_RS02215 PF00691 OmpA family HKK55_RS02215 PF05736 OprF membrane domain HKK55_RS02230 PF00311 Phosphoenolpyruvate carboxylase HKK55_RS02235 PF05191 Adenylate kinase, active site lid HKK55_RS02240 PF00814 Glycoprotease family HKK55_RS02250 PF01904 Protein of unknown function DUF72 HKK55_RS02265 PF04445 Putative SAM-dependent methyltransferase HKK55_RS02275 PF13533 Biotin-lipoyl like HKK55_RS02280 PF00873 AcrB/AcrD/AcrF family HKK55_RS02305 PF01553 Acyltransferase HKK55_RS02310 PF00313 'Cold-shock' DNA-binding domain HKK55_RS02320 PF13847 Methyltransferase domain HKK55_RS02325 PF07687 Peptidase dimerisation domain HKK55_RS02325 PF01546 Peptidase family M20/M25/M40 HKK55_RS02330 PF03552 Cellulose synthase HKK55_RS02330 PF00535 Glycosyl transferase family 2 HKK55_RS02330 PF07238 PilZ domain HKK55_RS02335 PF00899 ThiF family HKK55_RS02345 PF02657 Fe-S metabolism associated domain HKK55_RS02350 PF00266 Aminotransferase class-V HKK55_RS02355 PF14602 Hexapeptide repeat of succinyl-transferase HKK55_RS02355 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HKK55_RS02360 PF03960 ArsC family HKK55_RS02365 PF00999 Sodium/hydrogen exchanger family HKK55_RS02370 PF00155 Aminotransferase class I and II HKK55_RS02375 PF01842 ACT domain HKK55_RS02375 PF08335 GlnD PII-uridylyltransferase HKK55_RS02375 PF01966 HD domain HKK55_RS02375 PF01909 Nucleotidyltransferase domain HKK55_RS02380 PF00557 Metallopeptidase family M24 HKK55_RS02385 PF00318 Ribosomal protein S2 HKK55_RS02390 PF00889 Elongation factor TS HKK55_RS02395 PF00696 Amino acid kinase family HKK55_RS02400 PF01765 Ribosome recycling factor HKK55_RS02405 PF01255 Putative undecaprenyl diphosphate synthase HKK55_RS02415 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HKK55_RS02415 PF13288 DXP reductoisomerase C-terminal domain HKK55_RS02415 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HKK55_RS02420 PF17820 PDZ domain HKK55_RS02420 PF02163 Peptidase family M50 HKK55_RS02420 PF13180 PDZ domain HKK55_RS02425 PF07244 Surface antigen variable number repeat HKK55_RS02425 PF01103 Surface antigen HKK55_RS02430 PF03938 Outer membrane protein (OmpH-like) HKK55_RS02435 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS02435 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HKK55_RS02440 PF07977 FabA-like domain HKK55_RS02445 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HKK55_RS02445 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS02450 PF02684 Lipid-A-disaccharide synthetase HKK55_RS02455 PF01351 Ribonuclease HII HKK55_RS02460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HKK55_RS02460 PF14579 Helix-hairpin-helix motif HKK55_RS02460 PF02811 PHP domain HKK55_RS02460 PF07733 Bacterial DNA polymerase III alpha NTPase domain HKK55_RS02460 PF01336 OB-fold nucleic acid binding domain HKK55_RS02465 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HKK55_RS02470 PF09179 TilS substrate binding domain HKK55_RS02470 PF11734 TilS substrate C-terminal domain HKK55_RS02470 PF01171 PP-loop family HKK55_RS02475 PF00117 Glutamine amidotransferase class-I HKK55_RS02475 PF06418 CTP synthase N-terminus HKK55_RS02480 PF00793 DAHP synthetase I family HKK55_RS02485 PF03952 Enolase, N-terminal domain HKK55_RS02485 PF00113 Enolase, C-terminal TIM barrel domain HKK55_RS02490 PF04977 Septum formation initiator HKK55_RS02495 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HKK55_RS02500 PF03466 LysR substrate binding domain HKK55_RS02500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS02505 PF00107 Zinc-binding dehydrogenase HKK55_RS02505 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS02510 PF00756 Putative esterase HKK55_RS02515 PF02542 YgbB family HKK55_RS02520 PF01142 tRNA pseudouridine synthase D (TruD) HKK55_RS02525 PF01975 Survival protein SurE HKK55_RS02535 PF01551 Peptidase family M23 HKK55_RS02535 PF01476 LysM domain HKK55_RS02540 PF04545 Sigma-70, region 4 HKK55_RS02540 PF04539 Sigma-70 region 3 HKK55_RS02540 PF00140 Sigma-70 factor, region 1.2 HKK55_RS02540 PF04542 Sigma-70 region 2 HKK55_RS02545 PF00313 'Cold-shock' DNA-binding domain HKK55_RS02550 PF00692 dUTPase HKK55_RS02560 PF00005 ABC transporter HKK55_RS02570 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS02575 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS02580 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS02585 PF01804 Penicillin amidase HKK55_RS02590 PF02798 Glutathione S-transferase, N-terminal domain HKK55_RS02590 PF00043 Glutathione S-transferase, C-terminal domain HKK55_RS02595 PF00857 Isochorismatase family HKK55_RS02600 PF07516 SecA Wing and Scaffold domain HKK55_RS02600 PF01043 SecA preprotein cross-linking domain HKK55_RS02600 PF07517 SecA DEAD-like domain HKK55_RS02600 PF02810 SEC-C motif HKK55_RS02610 PF02810 SEC-C motif HKK55_RS02620 PF00691 OmpA family HKK55_RS02620 PF05736 OprF membrane domain HKK55_RS02640 PF13307 Helicase C-terminal domain HKK55_RS02640 PF06733 DEAD_2 HKK55_RS02645 PF17992 Agarase CBM like domain HKK55_RS02645 PF02449 Beta-galactosidase HKK55_RS02650 PF00144 Beta-lactamase HKK55_RS02655 PF00691 OmpA family HKK55_RS02655 PF04972 BON domain HKK55_RS02660 PF01243 Pyridoxamine 5'-phosphate oxidase HKK55_RS02660 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HKK55_RS02680 PF06965 Na+/H+ antiporter 1 HKK55_RS02685 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS02705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS02705 PF03466 LysR substrate binding domain HKK55_RS02720 PF05114 Protein of unknown function (DUF692) HKK55_RS02730 PF00005 ABC transporter HKK55_RS02735 PF00005 ABC transporter HKK55_RS02735 PF12399 Branched-chain amino acid ATP-binding cassette transporter HKK55_RS02740 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS02740 PF11862 Domain of unknown function (DUF3382) HKK55_RS02745 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS02755 PF13458 Periplasmic binding protein HKK55_RS02770 PF00563 EAL domain HKK55_RS02770 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS02770 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS02775 PF03692 Putative zinc- or iron-chelating domain HKK55_RS02780 PF07690 Major Facilitator Superfamily HKK55_RS02785 PF00176 SNF2 family N-terminal domain HKK55_RS02785 PF18339 RapA N-terminal Tudor like domain 1 HKK55_RS02785 PF12137 RNA polymerase recycling family C-terminal HKK55_RS02785 PF00271 Helicase conserved C-terminal domain HKK55_RS02785 PF18337 RapA N-terminal Tudor like domain HKK55_RS02800 PF01384 Phosphate transporter family HKK55_RS02810 PF01614 Bacterial transcriptional regulator HKK55_RS02810 PF09339 IclR helix-turn-helix domain HKK55_RS02815 PF07690 Major Facilitator Superfamily HKK55_RS02820 PF01144 Coenzyme A transferase HKK55_RS02825 PF01144 Coenzyme A transferase HKK55_RS02830 PF00108 Thiolase, N-terminal domain HKK55_RS02830 PF02803 Thiolase, C-terminal domain HKK55_RS02835 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal HKK55_RS02835 PF00775 Dioxygenase HKK55_RS02840 PF00775 Dioxygenase HKK55_RS02845 PF00083 Sugar (and other) transporter HKK55_RS02850 PF00206 Lyase HKK55_RS02850 PF10397 Adenylosuccinate lyase C-terminus HKK55_RS02855 PF12146 Serine aminopeptidase, S33 HKK55_RS02860 PF02627 Carboxymuconolactone decarboxylase family HKK55_RS02875 PF03573 outer membrane porin, OprD family HKK55_RS02880 PF02321 Outer membrane efflux protein HKK55_RS02885 PF00873 AcrB/AcrD/AcrF family HKK55_RS02890 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS02890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS02895 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS02895 PF08361 MAATS-type transcriptional repressor, C-terminal region HKK55_RS02905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK55_RS02910 PF07690 Major Facilitator Superfamily HKK55_RS02950 PF01546 Peptidase family M20/M25/M40 HKK55_RS02950 PF07687 Peptidase dimerisation domain HKK55_RS02955 PF07690 Major Facilitator Superfamily HKK55_RS02960 PF01425 Amidase HKK55_RS02975 PF13091 PLD-like domain HKK55_RS02980 PF14310 Fibronectin type III-like domain HKK55_RS02980 PF00933 Glycosyl hydrolase family 3 N terminal domain HKK55_RS02980 PF01915 Glycosyl hydrolase family 3 C-terminal domain HKK55_RS02985 PF04011 LemA family HKK55_RS03005 PF00892 EamA-like transporter family HKK55_RS03010 PF00593 TonB dependent receptor HKK55_RS03010 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS03025 PF07411 Domain of unknown function (DUF1508) HKK55_RS03030 PF00701 Dihydrodipicolinate synthetase family HKK55_RS03035 PF00596 Class II Aldolase and Adducin N-terminal domain HKK55_RS03040 PF08671 Anti-repressor SinI HKK55_RS03040 PF01381 Helix-turn-helix HKK55_RS03050 PF00465 Iron-containing alcohol dehydrogenase HKK55_RS03055 PF07690 Major Facilitator Superfamily HKK55_RS03070 PF03466 LysR substrate binding domain HKK55_RS03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03075 PF02515 CoA-transferase family III HKK55_RS03080 PF00682 HMGL-like HKK55_RS03085 PF07690 Major Facilitator Superfamily HKK55_RS03095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03095 PF03466 LysR substrate binding domain HKK55_RS03100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKK55_RS03130 PF04324 BFD-like [2Fe-2S] binding domain HKK55_RS03130 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS03140 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HKK55_RS03140 PF01266 FAD dependent oxidoreductase HKK55_RS03145 PF05544 Proline racemase HKK55_RS03150 PF00701 Dihydrodipicolinate synthetase family HKK55_RS03155 PF13520 Amino acid permease HKK55_RS03160 PF00171 Aldehyde dehydrogenase family HKK55_RS03165 PF02615 Malate/L-lactate dehydrogenase HKK55_RS03170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HKK55_RS03170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HKK55_RS03185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03185 PF03466 LysR substrate binding domain HKK55_RS03210 PF05973 Phage derived protein Gp49-like (DUF891) HKK55_RS03220 PF00561 alpha/beta hydrolase fold HKK55_RS03225 PF00849 RNA pseudouridylate synthase HKK55_RS03225 PF01479 S4 domain HKK55_RS03250 PF03167 Uracil DNA glycosylase superfamily HKK55_RS03260 PF01970 Tripartite tricarboxylate transporter TctA family HKK55_RS03275 PF03573 outer membrane porin, OprD family HKK55_RS03280 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS03280 PF00072 Response regulator receiver domain HKK55_RS03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS03285 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS03295 PF01571 Aminomethyltransferase folate-binding domain HKK55_RS03300 PF03937 Flavinator of succinate dehydrogenase HKK55_RS03310 PF02910 Fumarate reductase flavoprotein C-term HKK55_RS03310 PF00890 FAD binding domain HKK55_RS03315 PF08281 Sigma-70, region 4 HKK55_RS03315 PF04542 Sigma-70 region 2 HKK55_RS03320 PF03873 Anti sigma-E protein RseA, C-terminal domain HKK55_RS03320 PF03872 Anti sigma-E protein RseA, N-terminal domain HKK55_RS03325 PF03888 MucB/RseB N-terminal domain HKK55_RS03325 PF17188 MucB/RseB C-terminal domain HKK55_RS03330 PF13180 PDZ domain HKK55_RS03335 PF01435 Peptidase family M48 HKK55_RS03340 PF01206 Sulfurtransferase TusA HKK55_RS03345 PF01594 AI-2E family transporter HKK55_RS03350 PF00578 AhpC/TSA family HKK55_RS03360 PF00701 Dihydrodipicolinate synthetase family HKK55_RS03365 PF06804 NlpB/DapX lipoprotein HKK55_RS03370 PF00753 Metallo-beta-lactamase superfamily HKK55_RS03375 PF01259 SAICAR synthetase HKK55_RS03390 PF03466 LysR substrate binding domain HKK55_RS03390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03400 PF07690 Major Facilitator Superfamily HKK55_RS03415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03415 PF03466 LysR substrate binding domain HKK55_RS03420 PF06772 Bacterial low temperature requirement A protein (LtrA) HKK55_RS03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03430 PF03466 LysR substrate binding domain HKK55_RS03435 PF07690 Major Facilitator Superfamily HKK55_RS03440 PF00171 Aldehyde dehydrogenase family HKK55_RS03445 PF00205 Thiamine pyrophosphate enzyme, central domain HKK55_RS03445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKK55_RS03445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKK55_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03450 PF03466 LysR substrate binding domain HKK55_RS03455 PF13460 NAD(P)H-binding HKK55_RS03465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03465 PF03466 LysR substrate binding domain HKK55_RS03480 PF01494 FAD binding domain HKK55_RS03485 PF07690 Major Facilitator Superfamily HKK55_RS03495 PF02560 Cyanate lyase C-terminal domain HKK55_RS03500 PF00484 Carbonic anhydrase HKK55_RS03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03505 PF03466 LysR substrate binding domain HKK55_RS03510 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS03515 PF00120 Glutamine synthetase, catalytic domain HKK55_RS03520 PF08019 Phosphoethanolamine transferase EptA/EptB HKK55_RS03520 PF00884 Sulfatase HKK55_RS03530 PF01612 3'-5' exonuclease HKK55_RS03530 PF00570 HRDC domain HKK55_RS03535 PF05166 YcgL domain HKK55_RS03540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS03555 PF03692 Putative zinc- or iron-chelating domain HKK55_RS03575 PF01844 HNH endonuclease HKK55_RS03595 PF00326 Prolyl oligopeptidase family HKK55_RS03595 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HKK55_RS03605 PF13230 Glutamine amidotransferases class-II HKK55_RS03615 PF03466 LysR substrate binding domain HKK55_RS03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03620 PF03746 LamB/YcsF family HKK55_RS03625 PF02682 Carboxyltransferase domain, subdomain C and D HKK55_RS03630 PF02626 Carboxyltransferase domain, subdomain A and B HKK55_RS03640 PF00004 ATPase family associated with various cellular activities (AAA) HKK55_RS03640 PF07724 AAA domain (Cdc48 subfamily) HKK55_RS03640 PF17871 AAA lid domain HKK55_RS03640 PF10431 C-terminal, D2-small domain, of ClpB protein HKK55_RS03640 PF02861 Clp amino terminal domain, pathogenicity island component HKK55_RS03650 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS03670 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HKK55_RS03680 PF11898 Domain of unknown function (DUF3418) HKK55_RS03680 PF00270 DEAD/DEAH box helicase HKK55_RS03680 PF04408 Helicase associated domain (HA2) HKK55_RS03680 PF00271 Helicase conserved C-terminal domain HKK55_RS03680 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HKK55_RS03685 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HKK55_RS03685 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HKK55_RS03690 PF08281 Sigma-70, region 4 HKK55_RS03690 PF04542 Sigma-70 region 2 HKK55_RS03700 PF07396 Phosphate-selective porin O and P HKK55_RS03705 PF01548 Transposase HKK55_RS03705 PF02371 Transposase IS116/IS110/IS902 family HKK55_RS03710 PF00270 DEAD/DEAH box helicase HKK55_RS03710 PF00271 Helicase conserved C-terminal domain HKK55_RS03715 PF00924 Mechanosensitive ion channel HKK55_RS03720 PF00892 EamA-like transporter family HKK55_RS03725 PF02525 Flavodoxin-like fold HKK55_RS03740 PF00561 alpha/beta hydrolase fold HKK55_RS03745 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HKK55_RS03750 PF00664 ABC transporter transmembrane region HKK55_RS03750 PF00005 ABC transporter HKK55_RS03755 PF00230 Major intrinsic protein HKK55_RS03795 PF13509 S1 domain HKK55_RS03795 PF17783 CvfB-like winged helix domain HKK55_RS03800 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HKK55_RS03810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03810 PF03466 LysR substrate binding domain HKK55_RS03815 PF00474 Sodium:solute symporter family HKK55_RS03830 PF00491 Arginase family HKK55_RS03835 PF03466 LysR substrate binding domain HKK55_RS03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS03845 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS03850 PF05958 tRNA (Uracil-5-)-methyltransferase HKK55_RS03855 PF02824 TGS domain HKK55_RS03855 PF13291 ACT domain HKK55_RS03855 PF04607 Region found in RelA / SpoT proteins HKK55_RS03860 PF03819 MazG nucleotide pyrophosphohydrolase domain HKK55_RS03865 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HKK55_RS03880 PF00551 Formyl transferase HKK55_RS03885 PF00586 AIR synthase related protein, N-terminal domain HKK55_RS03885 PF02769 AIR synthase related protein, C-terminal domain HKK55_RS03895 PF01594 AI-2E family transporter HKK55_RS03900 PF00308 Bacterial dnaA protein HKK55_RS03905 PF00877 NlpC/P60 family HKK55_RS03910 PF00877 NlpC/P60 family HKK55_RS03915 PF07995 Glucose / Sorbosone dehydrogenase HKK55_RS03920 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HKK55_RS03920 PF12557 Cob(I)alamin adenosyltransferase N terminal HKK55_RS03925 PF07685 CobB/CobQ-like glutamine amidotransferase domain HKK55_RS03925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HKK55_RS03930 PF00881 Nitroreductase family HKK55_RS03935 PF03186 CobD/Cbib protein HKK55_RS03935 PF17113 Regulatory signalling modulator protein AmpE HKK55_RS03940 PF00155 Aminotransferase class I and II HKK55_RS03945 PF07685 CobB/CobQ-like glutamine amidotransferase domain HKK55_RS03945 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HKK55_RS03950 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HKK55_RS03955 PF02277 Phosphoribosyltransferase HKK55_RS03960 PF00300 Histidine phosphatase superfamily (branch 1) HKK55_RS03965 PF02654 Cobalamin-5-phosphate synthase HKK55_RS03970 PF01047 MarR family HKK55_RS03980 PF00255 Glutathione peroxidase HKK55_RS03985 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HKK55_RS04005 PF02646 RmuC family HKK55_RS04010 PF00672 HAMP domain HKK55_RS04010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS04010 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS04010 PF01627 Hpt domain HKK55_RS04010 PF00072 Response regulator receiver domain HKK55_RS04015 PF04304 Protein of unknown function (DUF454) HKK55_RS04025 PF16124 RecQ zinc-binding HKK55_RS04025 PF09382 RQC domain HKK55_RS04025 PF00271 Helicase conserved C-terminal domain HKK55_RS04025 PF00270 DEAD/DEAH box helicase HKK55_RS04025 PF00570 HRDC domain HKK55_RS04030 PF01047 MarR family HKK55_RS04035 PF01734 Patatin-like phospholipase HKK55_RS04055 PF12852 Cupin HKK55_RS04055 PF12833 Helix-turn-helix domain HKK55_RS04065 PF00155 Aminotransferase class I and II HKK55_RS04070 PF01329 Pterin 4 alpha carbinolamine dehydratase HKK55_RS04075 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HKK55_RS04080 PF00158 Sigma-54 interaction domain HKK55_RS04080 PF13188 PAS domain HKK55_RS04080 PF18024 Helix-turn-helix domain HKK55_RS04085 PF00460 Flagella basal body rod protein HKK55_RS04085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HKK55_RS04090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HKK55_RS04090 PF00460 Flagella basal body rod protein HKK55_RS04095 PF02107 Flagellar L-ring protein HKK55_RS04100 PF02119 Flagellar P-ring protein HKK55_RS04105 PF10135 Rod binding protein HKK55_RS04105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HKK55_RS04110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HKK55_RS04110 PF00460 Flagella basal body rod protein HKK55_RS04120 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HKK55_RS04120 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HKK55_RS04125 PF07196 Flagellin hook IN motif HKK55_RS04125 PF00700 Bacterial flagellin C-terminal helical region HKK55_RS04125 PF00669 Bacterial flagellin N-terminal helical region HKK55_RS04135 PF02465 Flagellar hook-associated protein 2 N-terminus HKK55_RS04135 PF07195 Flagellar hook-associated protein 2 C-terminus HKK55_RS04135 PF07196 Flagellin hook IN motif HKK55_RS04140 PF02561 Flagellar protein FliS HKK55_RS04150 PF00158 Sigma-54 interaction domain HKK55_RS04150 PF02954 Bacterial regulatory protein, Fis family HKK55_RS04150 PF06490 Flagellar regulatory protein FleQ HKK55_RS04155 PF13426 PAS domain HKK55_RS04155 PF00989 PAS fold HKK55_RS04155 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS04155 PF13188 PAS domain HKK55_RS04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS04160 PF00158 Sigma-54 interaction domain HKK55_RS04160 PF00072 Response regulator receiver domain HKK55_RS04160 PF02954 Bacterial regulatory protein, Fis family HKK55_RS04165 PF02049 Flagellar hook-basal body complex protein FliE HKK55_RS04170 PF08345 Flagellar M-ring protein C-terminal HKK55_RS04170 PF01514 Secretory protein of YscJ/FliF family HKK55_RS04175 PF14842 FliG N-terminal domain HKK55_RS04175 PF14841 FliG middle domain HKK55_RS04175 PF01706 FliG C-terminal domain HKK55_RS04185 PF18269 T3SS EscN ATPase C-terminal domain HKK55_RS04185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKK55_RS04195 PF13466 STAS domain HKK55_RS04200 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS04200 PF00072 Response regulator receiver domain HKK55_RS04220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HKK55_RS04220 PF02154 Flagellar motor switch protein FliM HKK55_RS04225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HKK55_RS04230 PF04347 Flagellar biosynthesis protein, FliO HKK55_RS04235 PF00813 FliP family HKK55_RS04240 PF01313 Bacterial export proteins, family 3 HKK55_RS04245 PF01311 Bacterial export proteins, family 1 HKK55_RS04250 PF01312 FlhB HrpN YscU SpaS Family HKK55_RS04255 PF00313 'Cold-shock' DNA-binding domain HKK55_RS04260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK55_RS04270 PF00771 FHIPEP family HKK55_RS04275 PF00448 SRP54-type protein, GTPase domain HKK55_RS04280 PF10609 NUBPL iron-transfer P-loop NTPase HKK55_RS04285 PF04542 Sigma-70 region 2 HKK55_RS04285 PF04539 Sigma-70 region 3 HKK55_RS04285 PF04545 Sigma-70, region 4 HKK55_RS04290 PF00072 Response regulator receiver domain HKK55_RS04295 PF04344 Chemotaxis phosphatase, CheZ HKK55_RS04300 PF01584 CheW-like domain HKK55_RS04300 PF02895 Signal transducing histidine kinase, homodimeric domain HKK55_RS04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS04300 PF01627 Hpt domain HKK55_RS04300 PF00072 Response regulator receiver domain HKK55_RS04305 PF00072 Response regulator receiver domain HKK55_RS04305 PF01339 CheB methylesterase HKK55_RS04310 PF01618 MotA/TolQ/ExbB proton channel family HKK55_RS04315 PF00691 OmpA family HKK55_RS04315 PF13677 Membrane MotB of proton-channel complex MotA/MotB HKK55_RS04320 PF13614 AAA domain HKK55_RS04330 PF01584 CheW-like domain HKK55_RS04340 PF01312 FlhB HrpN YscU SpaS Family HKK55_RS04350 PF00005 ABC transporter HKK55_RS04355 PF03379 CcmB protein HKK55_RS04360 PF01578 Cytochrome C assembly protein HKK55_RS04365 PF04995 Heme exporter protein D (CcmD) HKK55_RS04370 PF03100 CcmE HKK55_RS04375 PF01578 Cytochrome C assembly protein HKK55_RS04375 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HKK55_RS04380 PF08534 Redoxin HKK55_RS04385 PF03918 Cytochrome C biogenesis protein HKK55_RS04405 PF00005 ABC transporter HKK55_RS04415 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS04420 PF07702 UTRA domain HKK55_RS04420 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS04425 PF06754 Phosphonate metabolism protein PhnG HKK55_RS04435 PF05861 Bacterial phosphonate metabolism protein (PhnI) HKK55_RS04440 PF06007 Phosphonate metabolism protein PhnJ HKK55_RS04445 PF00005 ABC transporter HKK55_RS04450 PF00005 ABC transporter HKK55_RS04455 PF07969 Amidohydrolase family HKK55_RS04465 PF12706 Beta-lactamase superfamily domain HKK55_RS04480 PF00067 Cytochrome P450 HKK55_RS04490 PF03466 LysR substrate binding domain HKK55_RS04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS04500 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKK55_RS04500 PF00413 Matrixin HKK55_RS04500 PF08548 Peptidase M10 serralysin C terminal HKK55_RS04505 PF07690 Major Facilitator Superfamily HKK55_RS04520 PF00027 Cyclic nucleotide-binding domain HKK55_RS04520 PF00520 Ion transport protein HKK55_RS04530 PF00224 Pyruvate kinase, barrel domain HKK55_RS04530 PF02887 Pyruvate kinase, alpha/beta domain HKK55_RS04535 PF13660 Domain of unknown function (DUF4147) HKK55_RS04535 PF05161 MOFRL family HKK55_RS04540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HKK55_RS04540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HKK55_RS04545 PF01261 Xylose isomerase-like TIM barrel HKK55_RS04550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKK55_RS04550 PF00205 Thiamine pyrophosphate enzyme, central domain HKK55_RS04550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKK55_RS04555 PF03928 Haem-degrading HKK55_RS04565 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS04565 PF08362 YcdC-like protein, C-terminal region HKK55_RS04570 PF13533 Biotin-lipoyl like HKK55_RS04575 PF00873 AcrB/AcrD/AcrF family HKK55_RS04580 PF00873 AcrB/AcrD/AcrF family HKK55_RS04585 PF02321 Outer membrane efflux protein HKK55_RS04590 PF05661 Protein of unknown function (DUF808) HKK55_RS04595 PF04632 Fusaric acid resistance protein family HKK55_RS04600 PF04333 MlaA lipoprotein HKK55_RS04620 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HKK55_RS04625 PF04341 Protein of unknown function, DUF485 HKK55_RS04630 PF00474 Sodium:solute symporter family HKK55_RS04635 PF00285 Citrate synthase, C-terminal domain HKK55_RS04640 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HKK55_RS04645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HKK55_RS04650 PF00890 FAD binding domain HKK55_RS04650 PF02910 Fumarate reductase flavoprotein C-term HKK55_RS04655 PF13085 2Fe-2S iron-sulfur cluster binding domain HKK55_RS04660 PF00676 Dehydrogenase E1 component HKK55_RS04660 PF16870 2-oxoglutarate dehydrogenase C-terminal HKK55_RS04660 PF02779 Transketolase, pyrimidine binding domain HKK55_RS04660 PF16078 2-oxoglutarate dehydrogenase N-terminus HKK55_RS04665 PF02817 e3 binding domain HKK55_RS04665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKK55_RS04665 PF00364 Biotin-requiring enzyme HKK55_RS04670 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS04670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKK55_RS04675 PF00549 CoA-ligase HKK55_RS04675 PF08442 ATP-grasp domain HKK55_RS04680 PF02629 CoA binding domain HKK55_RS04680 PF00549 CoA-ligase HKK55_RS04685 PF05525 Branched-chain amino acid transport protein HKK55_RS04710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS04710 PF00183 Hsp90 protein HKK55_RS04720 PF02678 Pirin HKK55_RS04720 PF05726 Pirin C-terminal cupin domain HKK55_RS04735 PF12729 Four helix bundle sensory module for signal transduction HKK55_RS04735 PF00672 HAMP domain HKK55_RS04735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS04740 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK55_RS04740 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK55_RS04745 PF07977 FabA-like domain HKK55_RS04750 PF01627 Hpt domain HKK55_RS04750 PF00072 Response regulator receiver domain HKK55_RS04750 PF00672 HAMP domain HKK55_RS04750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS04750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HKK55_RS04750 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS04760 PF00593 TonB dependent receptor HKK55_RS04760 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS04765 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HKK55_RS04765 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HKK55_RS04780 PF00501 AMP-binding enzyme HKK55_RS04785 PF03061 Thioesterase superfamily HKK55_RS04795 PF00561 alpha/beta hydrolase fold HKK55_RS04805 PF01594 AI-2E family transporter HKK55_RS04810 PF16527 Two-component sensor protein CpxA, periplasmic domain HKK55_RS04810 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS04810 PF00672 HAMP domain HKK55_RS04815 PF00072 Response regulator receiver domain HKK55_RS04815 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS04820 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HKK55_RS04825 PF00107 Zinc-binding dehydrogenase HKK55_RS04825 PF16884 N-terminal domain of oxidoreductase HKK55_RS04835 PF00155 Aminotransferase class I and II HKK55_RS04835 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS04840 PF00672 HAMP domain HKK55_RS04840 PF16591 Helical bimodular sensor domain HKK55_RS04840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS04845 PF00561 alpha/beta hydrolase fold HKK55_RS04885 PF01618 MotA/TolQ/ExbB proton channel family HKK55_RS04895 PF02472 Biopolymer transport protein ExbD/TolR HKK55_RS04900 PF13302 Acetyltransferase (GNAT) domain HKK55_RS04905 PF09423 PhoD-like phosphatase HKK55_RS04905 PF16655 PhoD-like phosphatase, N-terminal domain HKK55_RS04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS04915 PF03466 LysR substrate binding domain HKK55_RS04925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS04925 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS04925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS04925 PF09317 Domain of unknown function (DUF1974) HKK55_RS04935 PF00043 Glutathione S-transferase, C-terminal domain HKK55_RS04935 PF13417 Glutathione S-transferase, N-terminal domain HKK55_RS04940 PF00005 ABC transporter HKK55_RS04945 PF01061 ABC-2 type transporter HKK55_RS04970 PF07690 Major Facilitator Superfamily HKK55_RS04975 PF00893 Small Multidrug Resistance protein HKK55_RS04980 PF01758 Sodium Bile acid symporter family HKK55_RS04985 PF04381 Putative exonuclease, RdgC HKK55_RS05010 PF07690 Major Facilitator Superfamily HKK55_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS05015 PF03466 LysR substrate binding domain HKK55_RS05030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK55_RS05030 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKK55_RS05055 PF00563 EAL domain HKK55_RS05055 PF17153 Periplasmic sensor domain, extracellular HKK55_RS05060 PF11818 C-terminal domain of tail specific protease (DUF3340) HKK55_RS05060 PF00595 PDZ domain HKK55_RS05060 PF17804 Tail specific protease N-terminal domain HKK55_RS05060 PF03572 Peptidase family S41 HKK55_RS05065 PF00698 Acyl transferase domain HKK55_RS05065 PF14765 Polyketide synthase dehydratase HKK55_RS05065 PF00550 Phosphopantetheine attachment site HKK55_RS05065 PF08659 KR domain HKK55_RS05065 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS05075 PF08402 TOBE domain HKK55_RS05075 PF00005 ABC transporter HKK55_RS05085 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS05100 PF07702 UTRA domain HKK55_RS05100 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS05105 PF01546 Peptidase family M20/M25/M40 HKK55_RS05105 PF07687 Peptidase dimerisation domain HKK55_RS05110 PF00924 Mechanosensitive ion channel HKK55_RS05120 PF02127 Aminopeptidase I zinc metalloprotease (M18) HKK55_RS05125 PF00849 RNA pseudouridylate synthase HKK55_RS05130 PF03776 Septum formation topological specificity factor MinE HKK55_RS05135 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HKK55_RS05140 PF05209 Septum formation inhibitor MinC, N-terminal domain HKK55_RS05140 PF03775 Septum formation inhibitor MinC, C-terminal domain HKK55_RS05145 PF03279 Bacterial lipid A biosynthesis acyltransferase HKK55_RS05165 PF00860 Permease family HKK55_RS05175 PF04115 Ureidoglycolate lyase HKK55_RS05180 PF03561 Allantoicase repeat HKK55_RS05185 PF09349 OHCU decarboxylase HKK55_RS05185 PF01014 Uricase HKK55_RS05195 PF00576 HIUase/Transthyretin family HKK55_RS05210 PF00860 Permease family HKK55_RS05220 PF00155 Aminotransferase class I and II HKK55_RS05225 PF02798 Glutathione S-transferase, N-terminal domain HKK55_RS05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS05230 PF03466 LysR substrate binding domain HKK55_RS05235 PF03600 Citrate transporter HKK55_RS05255 PF01227 GTP cyclohydrolase I HKK55_RS05260 PF01713 Smr domain HKK55_RS05275 PF05175 Methyltransferase small domain HKK55_RS05285 PF12146 Serine aminopeptidase, S33 HKK55_RS05285 PF13026 Protein of unknown function (DUF3887) HKK55_RS05290 PF01264 Chorismate synthase HKK55_RS05295 PF12832 MFS_1 like family HKK55_RS05300 PF03079 ARD/ARD' family HKK55_RS05305 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS05305 PF03472 Autoinducer binding domain HKK55_RS05315 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS05315 PF00501 AMP-binding enzyme HKK55_RS05320 PF00023 Ankyrin repeat HKK55_RS05320 PF12796 Ankyrin repeats (3 copies) HKK55_RS05335 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HKK55_RS05335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HKK55_RS05340 PF00884 Sulfatase HKK55_RS05340 PF16347 Domain of unknown function (DUF4976) HKK55_RS05350 PF00561 alpha/beta hydrolase fold HKK55_RS05350 PF00106 short chain dehydrogenase HKK55_RS05355 PF02599 Global regulator protein family HKK55_RS05360 PF06794 Uncharacterised protein family (UPF0270) HKK55_RS05370 PF08443 RimK-like ATP-grasp domain HKK55_RS05370 PF08245 Mur ligase middle domain HKK55_RS05370 PF02875 Mur ligase family, glutamate ligase domain HKK55_RS05375 PF13537 Glutamine amidotransferase domain HKK55_RS05375 PF00733 Asparagine synthase HKK55_RS05380 PF01266 FAD dependent oxidoreductase HKK55_RS05380 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HKK55_RS05385 PF12468 Type III secretion system leucine rich repeat protein HKK55_RS05385 PF14496 C-terminal novel E3 ligase, LRR-interacting HKK55_RS05390 PF03976 Polyphosphate kinase 2 (PPK2) HKK55_RS05395 PF00108 Thiolase, N-terminal domain HKK55_RS05395 PF02803 Thiolase, C-terminal domain HKK55_RS05400 PF00892 EamA-like transporter family HKK55_RS05405 PF10415 Fumarase C C-terminus HKK55_RS05405 PF00206 Lyase HKK55_RS05415 PF01722 BolA-like protein HKK55_RS05430 PF00664 ABC transporter transmembrane region HKK55_RS05430 PF00005 ABC transporter HKK55_RS05435 PF00563 EAL domain HKK55_RS05435 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS05435 PF08448 PAS fold HKK55_RS05445 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS05450 PF00106 short chain dehydrogenase HKK55_RS05455 PF13419 Haloacid dehalogenase-like hydrolase HKK55_RS05465 PF01979 Amidohydrolase family HKK55_RS05470 PF01008 Initiation factor 2 subunit family HKK55_RS05475 PF03989 DNA gyrase C-terminal domain, beta-propeller HKK55_RS05475 PF00521 DNA gyrase/topoisomerase IV, subunit A HKK55_RS05480 PF00266 Aminotransferase class-V HKK55_RS05485 PF01842 ACT domain HKK55_RS05485 PF00800 Prephenate dehydratase HKK55_RS05485 PF01817 Chorismate mutase type II HKK55_RS05490 PF00155 Aminotransferase class I and II HKK55_RS05495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKK55_RS05500 PF02224 Cytidylate kinase HKK55_RS05505 PF00575 S1 RNA binding domain HKK55_RS05510 PF00216 Bacterial DNA-binding protein HKK55_RS05525 PF00483 Nucleotidyl transferase HKK55_RS05530 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HKK55_RS05535 PF05523 WxcM-like, C-terminal HKK55_RS05540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HKK55_RS05545 PF01943 Polysaccharide biosynthesis protein HKK55_RS05550 PF00535 Glycosyl transferase family 2 HKK55_RS05565 PF00535 Glycosyl transferase family 2 HKK55_RS05570 PF01370 NAD dependent epimerase/dehydratase family HKK55_RS05575 PF00953 Glycosyl transferase family 4 HKK55_RS05580 PF02719 Polysaccharide biosynthesis protein HKK55_RS05630 PF03814 Potassium-transporting ATPase A subunit HKK55_RS05640 PF02669 K+-transporting ATPase, c chain HKK55_RS05645 PF13492 GAF domain HKK55_RS05645 PF02702 Osmosensitive K+ channel His kinase sensor domain HKK55_RS05645 PF13493 Domain of unknown function (DUF4118) HKK55_RS05645 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS05645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS05650 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS05650 PF00072 Response regulator receiver domain HKK55_RS05655 PF01734 Patatin-like phospholipase HKK55_RS05680 PF12729 Four helix bundle sensory module for signal transduction HKK55_RS05680 PF00672 HAMP domain HKK55_RS05680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS05685 PF01026 TatD related DNase HKK55_RS05690 PF01464 Transglycosylase SLT domain HKK55_RS05690 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS05715 PF00005 ABC transporter HKK55_RS05725 PF01272 Transcription elongation factor, GreA/GreB, C-term HKK55_RS05725 PF03449 Transcription elongation factor, N-terminal HKK55_RS05735 PF00005 ABC transporter HKK55_RS05740 PF13472 GDSL-like Lipase/Acylhydrolase family HKK55_RS05750 PF03734 L,D-transpeptidase catalytic domain HKK55_RS05750 PF17969 L,D-transpeptidase C-terminal domain HKK55_RS05755 PF11839 Alanine-zipper, major outer membrane lipoprotein HKK55_RS05765 PF00793 DAHP synthetase I family HKK55_RS05780 PF08546 Ketopantoate reductase PanE/ApbA C terminal HKK55_RS05780 PF02558 Ketopantoate reductase PanE/ApbA HKK55_RS05795 PF03466 LysR substrate binding domain HKK55_RS05795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS05800 PF03449 Transcription elongation factor, N-terminal HKK55_RS05800 PF01272 Transcription elongation factor, GreA/GreB, C-term HKK55_RS05815 PF01132 Elongation factor P (EF-P) OB domain HKK55_RS05815 PF09285 Elongation factor P, C-terminal HKK55_RS05815 PF08207 Elongation factor P (EF-P) KOW-like domain HKK55_RS05820 PF02566 OsmC-like protein HKK55_RS05825 PF01047 MarR family HKK55_RS05830 PF03466 LysR substrate binding domain HKK55_RS05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS05840 PF03466 LysR substrate binding domain HKK55_RS05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS05850 PF06224 Winged helix DNA-binding domain HKK55_RS05855 PF01474 Class-II DAHP synthetase family HKK55_RS05865 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS05870 PF03880 DbpA RNA binding domain HKK55_RS05870 PF00271 Helicase conserved C-terminal domain HKK55_RS05870 PF00270 DEAD/DEAH box helicase HKK55_RS05875 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HKK55_RS05880 PF05724 Thiopurine S-methyltransferase (TPMT) HKK55_RS05885 PF01435 Peptidase family M48 HKK55_RS05890 PF00155 Aminotransferase class I and II HKK55_RS05895 PF01641 SelR domain HKK55_RS05900 PF00255 Glutathione peroxidase HKK55_RS05905 PF01047 MarR family HKK55_RS05910 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS05910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS05910 PF01627 Hpt domain HKK55_RS05910 PF00072 Response regulator receiver domain HKK55_RS05910 PF00672 HAMP domain HKK55_RS05910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HKK55_RS05920 PF13185 GAF domain HKK55_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS05925 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS05925 PF00072 Response regulator receiver domain HKK55_RS05925 PF00989 PAS fold HKK55_RS05925 PF01627 Hpt domain HKK55_RS05925 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS05930 PF00072 Response regulator receiver domain HKK55_RS05930 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS05940 PF01966 HD domain HKK55_RS05945 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS05945 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS05945 PF00563 EAL domain HKK55_RS05945 PF13188 PAS domain HKK55_RS05965 PF00909 Ammonium Transporter Family HKK55_RS05980 PF01479 S4 domain HKK55_RS05980 PF00849 RNA pseudouridylate synthase HKK55_RS05990 PF12804 MobA-like NTP transferase domain HKK55_RS05995 PF00994 Probable molybdopterin binding domain HKK55_RS06000 PF03453 MoeA N-terminal region (domain I and II) HKK55_RS06000 PF03454 MoeA C-terminal region (domain IV) HKK55_RS06000 PF00994 Probable molybdopterin binding domain HKK55_RS06005 PF00781 Diacylglycerol kinase catalytic domain HKK55_RS06010 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS06010 PF00072 Response regulator receiver domain HKK55_RS06015 PF05231 MASE1 HKK55_RS06015 PF07730 Histidine kinase HKK55_RS06015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS06035 PF06865 Pyrimidine/purine nucleoside phosphorylase HKK55_RS06045 PF00289 Biotin carboxylase, N-terminal domain HKK55_RS06045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKK55_RS06045 PF00364 Biotin-requiring enzyme HKK55_RS06045 PF02785 Biotin carboxylase C-terminal domain HKK55_RS06050 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS06055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS06055 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS06055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS06060 PF01039 Carboxyl transferase domain HKK55_RS06075 PF17932 Tetracyclin repressor-like, C-terminal domain HKK55_RS06075 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS06095 PF00975 Thioesterase domain HKK55_RS06100 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS06100 PF00550 Phosphopantetheine attachment site HKK55_RS06100 PF00668 Condensation domain HKK55_RS06100 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS06100 PF00501 AMP-binding enzyme HKK55_RS06100 PF00501 AMP-binding enzyme HKK55_RS06100 PF00550 Phosphopantetheine attachment site HKK55_RS06100 PF00668 Condensation domain HKK55_RS06105 PF13098 Thioredoxin-like domain HKK55_RS06110 PF00578 AhpC/TSA family HKK55_RS06115 PF02683 Cytochrome C biogenesis protein transmembrane region HKK55_RS06115 PF11412 Disulphide bond corrector protein DsbC HKK55_RS06120 PF00072 Response regulator receiver domain HKK55_RS06120 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS06125 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS06125 PF08521 Two-component sensor kinase N-terminal HKK55_RS06125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS06130 PF01510 N-acetylmuramoyl-L-alanine amidase HKK55_RS06135 PF00202 Aminotransferase class-III HKK55_RS06140 PF03621 MbtH-like protein HKK55_RS06145 PF13407 Periplasmic binding protein domain HKK55_RS06150 PF00005 ABC transporter HKK55_RS06155 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS06160 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS06160 PF00107 Zinc-binding dehydrogenase HKK55_RS06165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HKK55_RS06165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HKK55_RS06175 PF00356 Bacterial regulatory proteins, lacI family HKK55_RS06175 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HKK55_RS06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS06180 PF03466 LysR substrate binding domain HKK55_RS06185 PF01425 Amidase HKK55_RS06190 PF01546 Peptidase family M20/M25/M40 HKK55_RS06190 PF07687 Peptidase dimerisation domain HKK55_RS06195 PF00005 ABC transporter HKK55_RS06200 PF00005 ABC transporter HKK55_RS06200 PF12399 Branched-chain amino acid ATP-binding cassette transporter HKK55_RS06210 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS06220 PF07729 FCD domain HKK55_RS06220 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS06230 PF00672 HAMP domain HKK55_RS06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS06230 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS06235 PF00072 Response regulator receiver domain HKK55_RS06235 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS06240 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HKK55_RS06245 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HKK55_RS06250 PF00300 Histidine phosphatase superfamily (branch 1) HKK55_RS06255 PF00005 ABC transporter HKK55_RS06285 PF01047 MarR family HKK55_RS06290 PF02321 Outer membrane efflux protein HKK55_RS06300 PF00550 Phosphopantetheine attachment site HKK55_RS06300 PF00668 Condensation domain HKK55_RS06300 PF00501 AMP-binding enzyme HKK55_RS06300 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS06305 PF01965 DJ-1/PfpI family HKK55_RS06305 PF12833 Helix-turn-helix domain HKK55_RS06310 PF00550 Phosphopantetheine attachment site HKK55_RS06310 PF00501 AMP-binding enzyme HKK55_RS06310 PF00668 Condensation domain HKK55_RS06310 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS06315 PF00501 AMP-binding enzyme HKK55_RS06315 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS06315 PF00668 Condensation domain HKK55_RS06315 PF00975 Thioesterase domain HKK55_RS06315 PF00550 Phosphopantetheine attachment site HKK55_RS06320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS06325 PF02687 FtsX-like permease family HKK55_RS06325 PF00005 ABC transporter HKK55_RS06325 PF12704 MacB-like periplasmic core domain HKK55_RS06335 PF01053 Cys/Met metabolism PLP-dependent enzyme HKK55_RS06340 PF13404 AsnC-type helix-turn-helix domain HKK55_RS06340 PF01037 Lrp/AsnC ligand binding domain HKK55_RS06345 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS06345 PF00155 Aminotransferase class I and II HKK55_RS06350 PF01810 LysE type translocator HKK55_RS06355 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS06355 PF05230 MASE2 domain HKK55_RS06360 PF07687 Peptidase dimerisation domain HKK55_RS06360 PF01546 Peptidase family M20/M25/M40 HKK55_RS06365 PF00873 AcrB/AcrD/AcrF family HKK55_RS06370 PF13533 Biotin-lipoyl like HKK55_RS06375 PF07690 Major Facilitator Superfamily HKK55_RS06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS06380 PF03466 LysR substrate binding domain HKK55_RS06385 PF05726 Pirin C-terminal cupin domain HKK55_RS06385 PF02678 Pirin HKK55_RS06390 PF00857 Isochorismatase family HKK55_RS06395 PF00857 Isochorismatase family HKK55_RS06405 PF02627 Carboxymuconolactone decarboxylase family HKK55_RS06410 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS06410 PF00593 TonB dependent receptor HKK55_RS06415 PF00483 Nucleotidyl transferase HKK55_RS06430 PF13649 Methyltransferase domain HKK55_RS06450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HKK55_RS06455 PF01761 3-dehydroquinate synthase HKK55_RS06470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK55_RS06470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKK55_RS06490 PF14525 AraC-binding-like domain HKK55_RS06490 PF12833 Helix-turn-helix domain HKK55_RS06495 PF00120 Glutamine synthetase, catalytic domain HKK55_RS06500 PF13416 Bacterial extracellular solute-binding protein HKK55_RS06505 PF01266 FAD dependent oxidoreductase HKK55_RS06510 PF01547 Bacterial extracellular solute-binding protein HKK55_RS06515 PF01266 FAD dependent oxidoreductase HKK55_RS06520 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS06520 PF04324 BFD-like [2Fe-2S] binding domain HKK55_RS06530 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS06535 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS06540 PF00005 ABC transporter HKK55_RS06540 PF08402 TOBE domain HKK55_RS06545 PF09339 IclR helix-turn-helix domain HKK55_RS06545 PF01614 Bacterial transcriptional regulator HKK55_RS06555 PF01554 MatE HKK55_RS06565 PF01810 LysE type translocator HKK55_RS06570 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS06575 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS06580 PF00005 ABC transporter HKK55_RS06585 PF00266 Aminotransferase class-V HKK55_RS06600 PF08281 Sigma-70, region 4 HKK55_RS06600 PF04542 Sigma-70 region 2 HKK55_RS06610 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS06610 PF07660 Secretin and TonB N terminus short domain HKK55_RS06610 PF00593 TonB dependent receptor HKK55_RS06630 PF07690 Major Facilitator Superfamily HKK55_RS06640 PF07690 Major Facilitator Superfamily HKK55_RS06645 PF05336 L-rhamnose mutarotase HKK55_RS06660 PF13378 Enolase C-terminal domain-like HKK55_RS06660 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HKK55_RS06665 PF01557 Fumarylacetoacetate (FAA) hydrolase family HKK55_RS06680 PF07729 FCD domain HKK55_RS06680 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS06685 PF01678 Diaminopimelate epimerase HKK55_RS06690 PF04717 Type VI secretion system, phage-baseplate injector HKK55_RS06690 PF16671 Actin cross-linking domain HKK55_RS06710 PF07969 Amidohydrolase family HKK55_RS06715 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HKK55_RS06720 PF00293 NUDIX domain HKK55_RS06725 PF01242 6-pyruvoyl tetrahydropterin synthase HKK55_RS06745 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS06745 PF00072 Response regulator receiver domain HKK55_RS06750 PF08918 PhoQ Sensor HKK55_RS06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS06755 PF00672 HAMP domain HKK55_RS06755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS06760 PF03553 Na+/H+ antiporter family HKK55_RS06760 PF13726 Na+-H+ antiporter family HKK55_RS06765 PF00672 HAMP domain HKK55_RS06765 PF17200 Single Cache domain 2 HKK55_RS06765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS06800 PF08501 Shikimate dehydrogenase substrate binding domain HKK55_RS06805 PF04337 Protein of unknown function, DUF480 HKK55_RS06815 PF00375 Sodium:dicarboxylate symporter family HKK55_RS06820 PF07690 Major Facilitator Superfamily HKK55_RS06825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS06825 PF03466 LysR substrate binding domain HKK55_RS06835 PF03471 Transporter associated domain HKK55_RS06835 PF03741 Integral membrane protein TerC family HKK55_RS06840 PF00586 AIR synthase related protein, N-terminal domain HKK55_RS06840 PF02769 AIR synthase related protein, C-terminal domain HKK55_RS06850 PF03773 Predicted permease HKK55_RS06860 PF02798 Glutathione S-transferase, N-terminal domain HKK55_RS06865 PF02567 Phenazine biosynthesis-like protein HKK55_RS06870 PF01810 LysE type translocator HKK55_RS06875 PF00490 Delta-aminolevulinic acid dehydratase HKK55_RS06880 PF01810 LysE type translocator HKK55_RS06885 PF07759 Protein of unknown function (DUF1615) HKK55_RS06895 PF03061 Thioesterase superfamily HKK55_RS06900 PF00108 Thiolase, N-terminal domain HKK55_RS06900 PF02803 Thiolase, C-terminal domain HKK55_RS06905 PF01144 Coenzyme A transferase HKK55_RS06910 PF01144 Coenzyme A transferase HKK55_RS06915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS06915 PF03466 LysR substrate binding domain HKK55_RS06925 PF02146 Sir2 family HKK55_RS06930 PF00571 CBS domain HKK55_RS06935 PF01751 Toprim domain HKK55_RS06935 PF01131 DNA topoisomerase HKK55_RS06940 PF07690 Major Facilitator Superfamily HKK55_RS06940 PF00083 Sugar (and other) transporter HKK55_RS06945 PF00732 GMC oxidoreductase HKK55_RS06945 PF05199 GMC oxidoreductase HKK55_RS06960 PF08713 DNA alkylation repair enzyme HKK55_RS06965 PF00120 Glutamine synthetase, catalytic domain HKK55_RS06985 PF01435 Peptidase family M48 HKK55_RS06990 PF04011 LemA family HKK55_RS06995 PF07690 Major Facilitator Superfamily HKK55_RS07005 PF05532 CsbD-like HKK55_RS07010 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS07010 PF00072 Response regulator receiver domain HKK55_RS07025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKK55_RS07025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK55_RS07030 PF01037 Lrp/AsnC ligand binding domain HKK55_RS07035 PF00005 ABC transporter HKK55_RS07040 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS07045 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS07050 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS07055 PF02423 Ornithine cyclodeaminase/mu-crystallin family HKK55_RS07065 PF00583 Acetyltransferase (GNAT) family HKK55_RS07070 PF01063 Amino-transferase class IV HKK55_RS07075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKK55_RS07075 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS07080 PF00364 Biotin-requiring enzyme HKK55_RS07080 PF02817 e3 binding domain HKK55_RS07080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKK55_RS07085 PF02779 Transketolase, pyrimidine binding domain HKK55_RS07085 PF02780 Transketolase, C-terminal domain HKK55_RS07090 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal HKK55_RS07090 PF00676 Dehydrogenase E1 component HKK55_RS07095 PF01037 Lrp/AsnC ligand binding domain HKK55_RS07100 PF00753 Metallo-beta-lactamase superfamily HKK55_RS07115 PF01925 Sulfite exporter TauE/SafE HKK55_RS07145 PF02321 Outer membrane efflux protein HKK55_RS07145 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HKK55_RS07150 PF02687 FtsX-like permease family HKK55_RS07150 PF00005 ABC transporter HKK55_RS07150 PF12704 MacB-like periplasmic core domain HKK55_RS07155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS07165 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HKK55_RS07175 PF12833 Helix-turn-helix domain HKK55_RS07175 PF02311 AraC-like ligand binding domain HKK55_RS07180 PF01726 LexA DNA binding domain HKK55_RS07180 PF00717 Peptidase S24-like HKK55_RS07185 PF03846 Cell division inhibitor SulA HKK55_RS07195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HKK55_RS07195 PF01336 OB-fold nucleic acid binding domain HKK55_RS07195 PF02811 PHP domain HKK55_RS07195 PF07733 Bacterial DNA polymerase III alpha NTPase domain HKK55_RS07195 PF14579 Helix-hairpin-helix motif HKK55_RS07200 PF17755 UvrA DNA-binding domain HKK55_RS07205 PF13533 Biotin-lipoyl like HKK55_RS07215 PF12704 MacB-like periplasmic core domain HKK55_RS07215 PF02687 FtsX-like permease family HKK55_RS07215 PF00005 ABC transporter HKK55_RS07220 PF02687 FtsX-like permease family HKK55_RS07220 PF12704 MacB-like periplasmic core domain HKK55_RS07220 PF00005 ABC transporter HKK55_RS07230 PF00561 alpha/beta hydrolase fold HKK55_RS07235 PF03466 LysR substrate binding domain HKK55_RS07235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS07245 PF00171 Aldehyde dehydrogenase family HKK55_RS07255 PF00484 Carbonic anhydrase HKK55_RS07260 PF07690 Major Facilitator Superfamily HKK55_RS07300 PF01565 FAD binding domain HKK55_RS07300 PF04030 D-arabinono-1,4-lactone oxidase HKK55_RS07310 PF00690 Cation transporter/ATPase, N-terminus HKK55_RS07310 PF00689 Cation transporting ATPase, C-terminus HKK55_RS07315 PF02308 MgtC family HKK55_RS07320 PF00072 Response regulator receiver domain HKK55_RS07320 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS07325 PF01627 Hpt domain HKK55_RS07325 PF00072 Response regulator receiver domain HKK55_RS07325 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS07325 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS07325 PF00989 PAS fold HKK55_RS07325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS07335 PF00248 Aldo/keto reductase family HKK55_RS07350 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS07350 PF00593 TonB dependent receptor HKK55_RS07355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS07355 PF03466 LysR substrate binding domain HKK55_RS07370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKK55_RS07385 PF02254 TrkA-N domain HKK55_RS07385 PF00999 Sodium/hydrogen exchanger family HKK55_RS07390 PF12951 Passenger-associated-transport-repeat HKK55_RS07405 PF03466 LysR substrate binding domain HKK55_RS07405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS07420 PF01566 Natural resistance-associated macrophage protein HKK55_RS07425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS07425 PF03466 LysR substrate binding domain HKK55_RS07470 PF03502 Nucleoside-specific channel-forming protein, Tsx HKK55_RS07475 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase HKK55_RS07480 PF12833 Helix-turn-helix domain HKK55_RS07505 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HKK55_RS07505 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HKK55_RS07510 PF02540 NAD synthase HKK55_RS07515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS07515 PF03466 LysR substrate binding domain HKK55_RS07520 PF00248 Aldo/keto reductase family HKK55_RS07525 PF00106 short chain dehydrogenase HKK55_RS07535 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS07535 PF00672 HAMP domain HKK55_RS07540 PF00072 Response regulator receiver domain HKK55_RS07540 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS07560 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS07560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS07565 PF00873 AcrB/AcrD/AcrF family HKK55_RS07570 PF01380 SIS domain HKK55_RS07570 PF01418 Helix-turn-helix domain, rpiR family HKK55_RS07575 PF00294 pfkB family carbohydrate kinase HKK55_RS07580 PF01261 Xylose isomerase-like TIM barrel HKK55_RS07585 PF04962 KduI/IolB family HKK55_RS07590 PF00171 Aldehyde dehydrogenase family HKK55_RS07600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKK55_RS07600 PF00205 Thiamine pyrophosphate enzyme, central domain HKK55_RS07600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKK55_RS07605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK55_RS07605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKK55_RS07610 PF01261 Xylose isomerase-like TIM barrel HKK55_RS07615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK55_RS07615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKK55_RS07625 PF13407 Periplasmic binding protein domain HKK55_RS07630 PF00005 ABC transporter HKK55_RS07635 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS07640 PF01258 Prokaryotic dksA/traR C4-type zinc finger HKK55_RS07675 PF00593 TonB dependent receptor HKK55_RS07675 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS07690 PF01425 Amidase HKK55_RS07695 PF08220 DeoR-like helix-turn-helix domain HKK55_RS07695 PF00455 DeoR C terminal sensor domain HKK55_RS07700 PF01546 Peptidase family M20/M25/M40 HKK55_RS07730 PF01590 GAF domain HKK55_RS07730 PF02954 Bacterial regulatory protein, Fis family HKK55_RS07730 PF00158 Sigma-54 interaction domain HKK55_RS07735 PF17912 MalK OB fold domain HKK55_RS07735 PF00005 ABC transporter HKK55_RS07740 PF08402 TOBE domain HKK55_RS07740 PF00005 ABC transporter HKK55_RS07745 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS07750 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS07775 PF00361 Proton-conducting membrane transporter HKK55_RS07780 PF00361 Proton-conducting membrane transporter HKK55_RS07785 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HKK55_RS07785 PF00361 Proton-conducting membrane transporter HKK55_RS07790 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HKK55_RS07795 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HKK55_RS07800 PF12838 4Fe-4S dicluster domain HKK55_RS07805 PF00146 NADH dehydrogenase HKK55_RS07810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HKK55_RS07810 PF00384 Molybdopterin oxidoreductase HKK55_RS07810 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HKK55_RS07815 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HKK55_RS07815 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HKK55_RS07825 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HKK55_RS07825 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HKK55_RS07830 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HKK55_RS07835 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HKK55_RS07840 PF00463 Isocitrate lyase family HKK55_RS07850 PF13673 Acetyltransferase (GNAT) domain HKK55_RS07855 PF08007 Cupin superfamily protein HKK55_RS07860 PF00206 Lyase HKK55_RS07860 PF08328 Adenylosuccinate lyase C-terminal HKK55_RS07865 PF04356 Protein of unknown function (DUF489) HKK55_RS07875 PF00293 NUDIX domain HKK55_RS07885 PF03971 Monomeric isocitrate dehydrogenase HKK55_RS07890 PF00180 Isocitrate/isopropylmalate dehydrogenase HKK55_RS07895 PF00313 'Cold-shock' DNA-binding domain HKK55_RS07900 PF02617 ATP-dependent Clp protease adaptor protein ClpS HKK55_RS07905 PF17871 AAA lid domain HKK55_RS07905 PF02861 Clp amino terminal domain, pathogenicity island component HKK55_RS07905 PF00004 ATPase family associated with various cellular activities (AAA) HKK55_RS07905 PF10431 C-terminal, D2-small domain, of ClpB protein HKK55_RS07905 PF07724 AAA domain (Cdc48 subfamily) HKK55_RS07910 PF01176 Translation initiation factor 1A / IF-1 HKK55_RS07915 PF04377 Arginine-tRNA-protein transferase, C terminus HKK55_RS07915 PF04376 Arginine-tRNA-protein transferase, N terminus HKK55_RS07920 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HKK55_RS07925 PF09397 Ftsk gamma domain HKK55_RS07925 PF17854 FtsK alpha domain HKK55_RS07925 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HKK55_RS07925 PF01580 FtsK/SpoIIIE family HKK55_RS07930 PF03548 Outer membrane lipoprotein carrier protein LolA HKK55_RS07935 PF12002 MgsA AAA+ ATPase C terminal HKK55_RS07935 PF00004 ATPase family associated with various cellular activities (AAA) HKK55_RS07935 PF16193 AAA C-terminal domain HKK55_RS07940 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HKK55_RS07945 PF02403 Seryl-tRNA synthetase N-terminal domain HKK55_RS07945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKK55_RS07950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKK55_RS07950 PF14824 Sirohaem biosynthesis protein central HKK55_RS07950 PF10414 Sirohaem synthase dimerisation region HKK55_RS07955 PF13409 Glutathione S-transferase, N-terminal domain HKK55_RS07960 PF00591 Glycosyl transferase family, a/b domain HKK55_RS07960 PF02885 Glycosyl transferase family, helical bundle domain HKK55_RS07965 PF04358 DsrC like protein HKK55_RS07975 PF02635 DsrE/DsrF-like family HKK55_RS07980 PF02635 DsrE/DsrF-like family HKK55_RS07985 PF01027 Inhibitor of apoptosis-promoting Bax1 HKK55_RS07995 PF00145 C-5 cytosine-specific DNA methylase HKK55_RS08040 PF00444 Ribosomal protein L36 HKK55_RS08100 PF00376 MerR family regulatory protein HKK55_RS08100 PF09278 MerR, DNA binding HKK55_RS08125 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HKK55_RS08145 PF03466 LysR substrate binding domain HKK55_RS08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS08165 PF13649 Methyltransferase domain HKK55_RS08190 PF07690 Major Facilitator Superfamily HKK55_RS08200 PF01223 DNA/RNA non-specific endonuclease HKK55_RS08220 PF01557 Fumarylacetoacetate (FAA) hydrolase family HKK55_RS08245 PF00563 EAL domain HKK55_RS08245 PF01590 GAF domain HKK55_RS08245 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS08245 PF00360 Phytochrome region HKK55_RS08255 PF01243 Pyridoxamine 5'-phosphate oxidase HKK55_RS08255 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HKK55_RS08260 PF02567 Phenazine biosynthesis-like protein HKK55_RS08265 PF00117 Glutamine amidotransferase class-I HKK55_RS08265 PF00425 chorismate binding enzyme HKK55_RS08270 PF00857 Isochorismatase family HKK55_RS08275 PF01474 Class-II DAHP synthetase family HKK55_RS08280 PF03284 Phenazine biosynthesis protein A/B HKK55_RS08285 PF03284 Phenazine biosynthesis protein A/B HKK55_RS08290 PF03472 Autoinducer binding domain HKK55_RS08290 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS08295 PF00765 Autoinducer synthase HKK55_RS08305 PF03099 Biotin/lipoate A/B protein ligase family HKK55_RS08305 PF00293 NUDIX domain HKK55_RS08310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK55_RS08310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKK55_RS08315 PF00445 Ribonuclease T2 family HKK55_RS08325 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS08325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK55_RS08330 PF00596 Class II Aldolase and Adducin N-terminal domain HKK55_RS08335 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS08335 PF13977 BetI-type transcriptional repressor, C-terminal HKK55_RS08340 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS08345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS08345 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS08345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS08355 PF00205 Thiamine pyrophosphate enzyme, central domain HKK55_RS08355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKK55_RS08355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKK55_RS08360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS08365 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS08375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKK55_RS08375 PF00005 ABC transporter HKK55_RS08380 PF02525 Flavodoxin-like fold HKK55_RS08390 PF00202 Aminotransferase class-III HKK55_RS08395 PF13416 Bacterial extracellular solute-binding protein HKK55_RS08400 PF00248 Aldo/keto reductase family HKK55_RS08405 PF05638 Type VI secretion system effector, Hcp HKK55_RS08435 PF03793 PASTA domain HKK55_RS08435 PF00069 Protein kinase domain HKK55_RS08455 PF02378 Phosphotransferase system, EIIC HKK55_RS08465 PF00106 short chain dehydrogenase HKK55_RS08470 PF00743 Flavin-binding monooxygenase-like HKK55_RS08475 PF00561 alpha/beta hydrolase fold HKK55_RS08475 PF08386 TAP-like protein HKK55_RS08480 PF00487 Fatty acid desaturase HKK55_RS08500 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HKK55_RS08505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS08505 PF09317 Domain of unknown function (DUF1974) HKK55_RS08505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS08520 PF00108 Thiolase, N-terminal domain HKK55_RS08520 PF02803 Thiolase, C-terminal domain HKK55_RS08525 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS08525 PF00501 AMP-binding enzyme HKK55_RS08530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK55_RS08530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKK55_RS08555 PF10282 Lactonase, 7-bladed beta-propeller HKK55_RS08580 PF12320 Type 5 capsule protein repressor C-terminal domain HKK55_RS08580 PF00149 Calcineurin-like phosphoesterase HKK55_RS08610 PF01882 Protein of unknown function DUF58 HKK55_RS08615 PF17863 AAA lid domain HKK55_RS08615 PF07726 ATPase family associated with various cellular activities (AAA) HKK55_RS08625 PF05088 Bacterial NAD-glutamate dehydrogenase HKK55_RS08635 PF07729 FCD domain HKK55_RS08635 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS08640 PF00375 Sodium:dicarboxylate symporter family HKK55_RS08645 PF03352 Methyladenine glycosylase HKK55_RS08655 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS08655 PF00155 Aminotransferase class I and II HKK55_RS08660 PF02627 Carboxymuconolactone decarboxylase family HKK55_RS08680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK55_RS08680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS08695 PF11791 Aconitate B N-terminal domain HKK55_RS08695 PF06434 Aconitate hydratase 2 N-terminus HKK55_RS08695 PF00330 Aconitase family (aconitate hydratase) HKK55_RS08705 PF00582 Universal stress protein family HKK55_RS08710 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HKK55_RS08720 PF00072 Response regulator receiver domain HKK55_RS08720 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS08725 PF00672 HAMP domain HKK55_RS08725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS08725 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS08735 PF00144 Beta-lactamase HKK55_RS08740 PF04828 Glutathione-dependent formaldehyde-activating enzyme HKK55_RS08760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS08760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS08760 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS08770 PF02515 CoA-transferase family III HKK55_RS08775 PF03328 HpcH/HpaI aldolase/citrate lyase family HKK55_RS08780 PF03480 Bacterial extracellular solute-binding protein, family 7 HKK55_RS08785 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HKK55_RS08790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HKK55_RS08800 PF00144 Beta-lactamase HKK55_RS08805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS08805 PF03466 LysR substrate binding domain HKK55_RS08810 PF01738 Dienelactone hydrolase family HKK55_RS08825 PF00892 EamA-like transporter family HKK55_RS08830 PF00155 Aminotransferase class I and II HKK55_RS08830 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS08845 PF01053 Cys/Met metabolism PLP-dependent enzyme HKK55_RS08850 PF00571 CBS domain HKK55_RS08850 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS08865 PF01494 FAD binding domain HKK55_RS08875 PF05662 Coiled stalk of trimeric autotransporter adhesin HKK55_RS08875 PF05658 Head domain of trimeric autotransporter adhesin HKK55_RS08875 PF03895 YadA-like membrane anchor domain HKK55_RS08875 PF13018 Extended Signal Peptide of Type V secretion system HKK55_RS08875 PF05658 Head domain of trimeric autotransporter adhesin HKK55_RS08875 PF13018 Extended Signal Peptide of Type V secretion system HKK55_RS08875 PF05662 Coiled stalk of trimeric autotransporter adhesin HKK55_RS08875 PF03895 YadA-like membrane anchor domain HKK55_RS08880 PF03466 LysR substrate binding domain HKK55_RS08880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS08885 PF07969 Amidohydrolase family HKK55_RS08905 PF00117 Glutamine amidotransferase class-I HKK55_RS08915 PF07690 Major Facilitator Superfamily HKK55_RS08920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS08920 PF00672 HAMP domain HKK55_RS08920 PF12729 Four helix bundle sensory module for signal transduction HKK55_RS08925 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HKK55_RS08935 PF07690 Major Facilitator Superfamily HKK55_RS08940 PF03466 LysR substrate binding domain HKK55_RS08940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS08965 PF12849 PBP superfamily domain HKK55_RS08970 PF12849 PBP superfamily domain HKK55_RS08990 PF01618 MotA/TolQ/ExbB proton channel family HKK55_RS08995 PF02472 Biopolymer transport protein ExbD/TolR HKK55_RS09020 PF00639 PPIC-type PPIASE domain HKK55_RS09030 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS09035 PF02515 CoA-transferase family III HKK55_RS09040 PF07690 Major Facilitator Superfamily HKK55_RS09045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS09045 PF03466 LysR substrate binding domain HKK55_RS09050 PF00005 ABC transporter HKK55_RS09050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKK55_RS09055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKK55_RS09055 PF00005 ABC transporter HKK55_RS09060 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS09060 PF12911 N-terminal TM domain of oligopeptide transport permease C HKK55_RS09065 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS09070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS09075 PF01427 D-ala-D-ala dipeptidase HKK55_RS09085 PF02666 Phosphatidylserine decarboxylase HKK55_RS09090 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS09090 PF00072 Response regulator receiver domain HKK55_RS09095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HKK55_RS09095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HKK55_RS09100 PF00501 AMP-binding enzyme HKK55_RS09100 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS09105 PF00083 Sugar (and other) transporter HKK55_RS09105 PF08946 Osmosensory transporter coiled coil HKK55_RS09130 PF13593 SBF-like CPA transporter family (DUF4137) HKK55_RS09140 PF07690 Major Facilitator Superfamily HKK55_RS09150 PF12833 Helix-turn-helix domain HKK55_RS09150 PF01965 DJ-1/PfpI family HKK55_RS09160 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS09160 PF00107 Zinc-binding dehydrogenase HKK55_RS09170 PF17954 Quercetinase C-terminal cupin domain HKK55_RS09170 PF02678 Pirin HKK55_RS09185 PF07969 Amidohydrolase family HKK55_RS09190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS09190 PF03466 LysR substrate binding domain HKK55_RS09195 PF00593 TonB dependent receptor HKK55_RS09195 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS09200 PF01042 Endoribonuclease L-PSP HKK55_RS09205 PF01593 Flavin containing amine oxidoreductase HKK55_RS09210 PF00593 TonB dependent receptor HKK55_RS09210 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS09215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK55_RS09215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS09220 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS09220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS09220 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS09230 PF00296 Luciferase-like monooxygenase HKK55_RS09245 PF05995 Cysteine dioxygenase type I HKK55_RS09250 PF03466 LysR substrate binding domain HKK55_RS09250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS09255 PF00596 Class II Aldolase and Adducin N-terminal domain HKK55_RS09260 PF00296 Luciferase-like monooxygenase HKK55_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS09270 PF00005 ABC transporter HKK55_RS09285 PF12833 Helix-turn-helix domain HKK55_RS09285 PF02311 AraC-like ligand binding domain HKK55_RS09295 PF00356 Bacterial regulatory proteins, lacI family HKK55_RS09300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKK55_RS09300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK55_RS09310 PF03825 Nucleoside H+ symporter HKK55_RS09315 PF01037 Lrp/AsnC ligand binding domain HKK55_RS09325 PF04960 Glutaminase HKK55_RS09335 PF16653 Saccharopine dehydrogenase C-terminal domain HKK55_RS09335 PF03435 Saccharopine dehydrogenase NADP binding domain HKK55_RS09340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HKK55_RS09350 PF13416 Bacterial extracellular solute-binding protein HKK55_RS09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS09360 PF03466 LysR substrate binding domain HKK55_RS09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS09365 PF03466 LysR substrate binding domain HKK55_RS09375 PF17938 Tetracyclin repressor-like, C-terminal domain HKK55_RS09375 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS09510 PF00293 NUDIX domain HKK55_RS09515 PF01844 HNH endonuclease HKK55_RS09530 PF02525 Flavodoxin-like fold HKK55_RS09545 PF02525 Flavodoxin-like fold HKK55_RS09550 PF01638 HxlR-like helix-turn-helix HKK55_RS09565 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS09565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS09565 PF08521 Two-component sensor kinase N-terminal HKK55_RS09570 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS09570 PF00072 Response regulator receiver domain HKK55_RS09585 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKK55_RS09585 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKK55_RS09600 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS09610 PF00106 short chain dehydrogenase HKK55_RS09615 PF12833 Helix-turn-helix domain HKK55_RS09615 PF06719 AraC-type transcriptional regulator N-terminus HKK55_RS09620 PF00326 Prolyl oligopeptidase family HKK55_RS09620 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HKK55_RS09650 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS09655 PF00005 ABC transporter HKK55_RS09660 PF13407 Periplasmic binding protein domain HKK55_RS09670 PF12833 Helix-turn-helix domain HKK55_RS09675 PF00296 Luciferase-like monooxygenase HKK55_RS09680 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS09685 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS09690 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS09690 PF07729 FCD domain HKK55_RS09695 PF00920 Dehydratase family HKK55_RS09700 PF07690 Major Facilitator Superfamily HKK55_RS09710 PF00171 Aldehyde dehydrogenase family HKK55_RS09720 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HKK55_RS09725 PF00005 ABC transporter HKK55_RS09730 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS09735 PF01263 Aldose 1-epimerase HKK55_RS09760 PF01810 LysE type translocator HKK55_RS09800 PF00690 Cation transporter/ATPase, N-terminus HKK55_RS09800 PF00689 Cation transporting ATPase, C-terminus HKK55_RS09810 PF01810 LysE type translocator HKK55_RS09820 PF02040 Arsenical pump membrane protein HKK55_RS09825 PF01022 Bacterial regulatory protein, arsR family HKK55_RS09840 PF03591 AzlC protein HKK55_RS09860 PF06912 Protein of unknown function (DUF1275) HKK55_RS09865 PF00005 ABC transporter HKK55_RS09865 PF16326 ABC transporter C-terminal domain HKK55_RS09865 PF12848 ABC transporter HKK55_RS09875 PF03459 TOBE domain HKK55_RS09875 PF00005 ABC transporter HKK55_RS09880 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS09890 PF03060 Nitronate monooxygenase HKK55_RS09895 PF00561 alpha/beta hydrolase fold HKK55_RS09925 PF00107 Zinc-binding dehydrogenase HKK55_RS09925 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS09925 PF00698 Acyl transferase domain HKK55_RS09925 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK55_RS09925 PF08659 KR domain HKK55_RS09925 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK55_RS09925 PF16197 Ketoacyl-synthetase C-terminal extension HKK55_RS09925 PF00550 Phosphopantetheine attachment site HKK55_RS09925 PF14765 Polyketide synthase dehydratase HKK55_RS09930 PF12833 Helix-turn-helix domain HKK55_RS09930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HKK55_RS09930 PF02805 Metal binding domain of Ada HKK55_RS09930 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HKK55_RS09935 PF13532 2OG-Fe(II) oxygenase superfamily HKK55_RS09940 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA HKK55_RS09960 PF00034 Cytochrome c HKK55_RS09965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS09985 PF00483 Nucleotidyl transferase HKK55_RS09990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKK55_RS09990 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS10005 PF00578 AhpC/TSA family HKK55_RS10005 PF10417 C-terminal domain of 1-Cys peroxiredoxin HKK55_RS10010 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS10010 PF13192 Thioredoxin domain HKK55_RS10015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKK55_RS10030 PF00563 EAL domain HKK55_RS10030 PF12792 CSS motif domain associated with EAL HKK55_RS10035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKK55_RS10040 PF00892 EamA-like transporter family HKK55_RS10045 PF01037 Lrp/AsnC ligand binding domain HKK55_RS10050 PF00248 Aldo/keto reductase family HKK55_RS10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS10070 PF03466 LysR substrate binding domain HKK55_RS10080 PF07690 Major Facilitator Superfamily HKK55_RS10085 PF13556 PucR C-terminal helix-turn-helix domain HKK55_RS10085 PF17853 GGDEF-like domain HKK55_RS10085 PF05651 Putative sugar diacid recognition HKK55_RS10090 PF02595 Glycerate kinase family HKK55_RS10095 PF00850 Histone deacetylase domain HKK55_RS10110 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS10110 PF00072 Response regulator receiver domain HKK55_RS10120 PF04542 Sigma-70 region 2 HKK55_RS10120 PF08281 Sigma-70, region 4 HKK55_RS10125 PF16220 Domain of unknown function (DUF4880) HKK55_RS10125 PF04773 FecR protein HKK55_RS10130 PF00593 TonB dependent receptor HKK55_RS10130 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS10135 PF00593 TonB dependent receptor HKK55_RS10135 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS10140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS10145 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS10150 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS10150 PF12911 N-terminal TM domain of oligopeptide transport permease C HKK55_RS10155 PF00005 ABC transporter HKK55_RS10155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKK55_RS10160 PF00294 pfkB family carbohydrate kinase HKK55_RS10165 PF07690 Major Facilitator Superfamily HKK55_RS10175 PF00455 DeoR C terminal sensor domain HKK55_RS10175 PF08220 DeoR-like helix-turn-helix domain HKK55_RS10180 PF01791 DeoC/LacD family aldolase HKK55_RS10185 PF04403 Paraquat-inducible protein A HKK55_RS10190 PF04403 Paraquat-inducible protein A HKK55_RS10195 PF02470 MlaD protein HKK55_RS10205 PF00873 AcrB/AcrD/AcrF family HKK55_RS10210 PF13533 Biotin-lipoyl like HKK55_RS10215 PF02321 Outer membrane efflux protein HKK55_RS10255 PF04717 Type VI secretion system, phage-baseplate injector HKK55_RS10265 PF04820 Tryptophan halogenase HKK55_RS10270 PF08933 Domain of unknown function (DUF1864) HKK55_RS10275 PF04820 Tryptophan halogenase HKK55_RS10280 PF00355 Rieske [2Fe-2S] domain HKK55_RS10290 PF00999 Sodium/hydrogen exchanger family HKK55_RS10295 PF01613 Flavin reductase like domain HKK55_RS10305 PF01042 Endoribonuclease L-PSP HKK55_RS10310 PF01136 Peptidase family U32 HKK55_RS10310 PF12392 Collagenase HKK55_RS10315 PF03466 LysR substrate binding domain HKK55_RS10315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS10320 PF00171 Aldehyde dehydrogenase family HKK55_RS10330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HKK55_RS10330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HKK55_RS10335 PF00356 Bacterial regulatory proteins, lacI family HKK55_RS10340 PF13407 Periplasmic binding protein domain HKK55_RS10345 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS10350 PF00005 ABC transporter HKK55_RS10360 PF13977 BetI-type transcriptional repressor, C-terminal HKK55_RS10360 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS10365 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS10370 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS10375 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS10380 PF00155 Aminotransferase class I and II HKK55_RS10395 PF14403 Circularly permuted ATP-grasp type 2 HKK55_RS10400 PF14403 Circularly permuted ATP-grasp type 2 HKK55_RS10400 PF04168 A predicted alpha-helical domain with a conserved ER motif. HKK55_RS10410 PF01625 Peptide methionine sulfoxide reductase HKK55_RS10415 PF00578 AhpC/TSA family HKK55_RS10415 PF02683 Cytochrome C biogenesis protein transmembrane region HKK55_RS10415 PF17991 Thioredoxin like C-terminal domain HKK55_RS10420 PF01641 SelR domain HKK55_RS10425 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS10425 PF00072 Response regulator receiver domain HKK55_RS10435 PF00561 alpha/beta hydrolase fold HKK55_RS10440 PF00271 Helicase conserved C-terminal domain HKK55_RS10440 PF00270 DEAD/DEAH box helicase HKK55_RS10445 PF18081 Fanconi anemia-associated nuclease SAP domain HKK55_RS10445 PF08774 VRR-NUC domain HKK55_RS10455 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKK55_RS10460 PF12951 Passenger-associated-transport-repeat HKK55_RS10460 PF03797 Autotransporter beta-domain HKK55_RS10460 PF00082 Subtilase family HKK55_RS10465 PF12951 Passenger-associated-transport-repeat HKK55_RS10465 PF00082 Subtilase family HKK55_RS10465 PF03797 Autotransporter beta-domain HKK55_RS10470 PF02321 Outer membrane efflux protein HKK55_RS10475 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS10480 PF00664 ABC transporter transmembrane region HKK55_RS10480 PF00005 ABC transporter HKK55_RS10485 PF02974 Protease inhibitor Inh HKK55_RS10490 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKK55_RS10490 PF00413 Matrixin HKK55_RS10490 PF08548 Peptidase M10 serralysin C terminal HKK55_RS10495 PF03576 Peptidase family S58 HKK55_RS10500 PF00324 Amino acid permease HKK55_RS10505 PF00072 Response regulator receiver domain HKK55_RS10505 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS10510 PF13416 Bacterial extracellular solute-binding protein HKK55_RS10520 PF01266 FAD dependent oxidoreductase HKK55_RS10535 PF13361 UvrD-like helicase C-terminal domain HKK55_RS10535 PF00580 UvrD/REP helicase N-terminal domain HKK55_RS10535 PF12462 DNA helicase IV / RNA helicase N terminal HKK55_RS10540 PF02678 Pirin HKK55_RS10540 PF17954 Quercetinase C-terminal cupin domain HKK55_RS10545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKK55_RS10545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKK55_RS10545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKK55_RS10545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKK55_RS10550 PF00155 Aminotransferase class I and II HKK55_RS10550 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS10560 PF08659 KR domain HKK55_RS10560 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK55_RS10560 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK55_RS10560 PF16197 Ketoacyl-synthetase C-terminal extension HKK55_RS10560 PF00550 Phosphopantetheine attachment site HKK55_RS10560 PF14765 Polyketide synthase dehydratase HKK55_RS10560 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS10560 PF00698 Acyl transferase domain HKK55_RS10560 PF00107 Zinc-binding dehydrogenase HKK55_RS10565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS10565 PF03466 LysR substrate binding domain HKK55_RS10570 PF00873 AcrB/AcrD/AcrF family HKK55_RS10575 PF13533 Biotin-lipoyl like HKK55_RS10580 PF02321 Outer membrane efflux protein HKK55_RS10585 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS10585 PF00072 Response regulator receiver domain HKK55_RS10590 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS10590 PF00072 Response regulator receiver domain HKK55_RS10595 PF00672 HAMP domain HKK55_RS10595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS10595 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS10600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS10600 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS10605 PF00873 AcrB/AcrD/AcrF family HKK55_RS10610 PF02321 Outer membrane efflux protein HKK55_RS10615 PF12833 Helix-turn-helix domain HKK55_RS10620 PF03239 Iron permease FTR1 family HKK55_RS10625 PF13473 Cupredoxin-like domain HKK55_RS10625 PF09375 Imelysin HKK55_RS10630 PF04261 Dyp-type peroxidase family HKK55_RS10635 PF13473 Cupredoxin-like domain HKK55_RS10635 PF09375 Imelysin HKK55_RS10645 PF13091 PLD-like domain HKK55_RS10660 PF07995 Glucose / Sorbosone dehydrogenase HKK55_RS10670 PF02735 Ku70/Ku80 beta-barrel domain HKK55_RS10675 PF13298 DNA polymerase Ligase (LigD) HKK55_RS10675 PF01068 ATP dependent DNA ligase domain HKK55_RS10675 PF04679 ATP dependent DNA ligase C terminal region HKK55_RS10695 PF08003 Protein of unknown function (DUF1698) HKK55_RS10700 PF00005 ABC transporter HKK55_RS10700 PF12848 ABC transporter HKK55_RS10705 PF07690 Major Facilitator Superfamily HKK55_RS10715 PF02525 Flavodoxin-like fold HKK55_RS10720 PF03466 LysR substrate binding domain HKK55_RS10720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS10735 PF02673 Bacitracin resistance protein BacA HKK55_RS10740 PF00672 HAMP domain HKK55_RS10740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS10740 PF17200 Single Cache domain 2 HKK55_RS10755 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS10760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS10760 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS10760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS10780 PF09335 SNARE associated Golgi protein HKK55_RS10800 PF00561 alpha/beta hydrolase fold HKK55_RS10805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK55_RS10805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS10805 PF01842 ACT domain HKK55_RS10810 PF00534 Glycosyl transferases group 1 HKK55_RS10810 PF08323 Starch synthase catalytic domain HKK55_RS10815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HKK55_RS10815 PF00128 Alpha amylase, catalytic domain HKK55_RS10815 PF11941 Domain of unknown function (DUF3459) HKK55_RS10820 PF02446 4-alpha-glucanotransferase HKK55_RS10825 PF00128 Alpha amylase, catalytic domain HKK55_RS10835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HKK55_RS10835 PF00128 Alpha amylase, catalytic domain HKK55_RS10865 PF00128 Alpha amylase, catalytic domain HKK55_RS10865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HKK55_RS10865 PF02806 Alpha amylase, C-terminal all-beta domain HKK55_RS10870 PF16657 Maltogenic Amylase, C-terminal domain HKK55_RS10870 PF00128 Alpha amylase, catalytic domain HKK55_RS10875 PF11896 Domain of unknown function (DUF3416) HKK55_RS10875 PF00128 Alpha amylase, catalytic domain HKK55_RS10885 PF13746 4Fe-4S dicluster domain HKK55_RS10885 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HKK55_RS10885 PF12801 4Fe-4S binding domain HKK55_RS10890 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS10890 PF00155 Aminotransferase class I and II HKK55_RS10905 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS10905 PF00563 EAL domain HKK55_RS10905 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS10910 PF02321 Outer membrane efflux protein HKK55_RS10915 PF00873 AcrB/AcrD/AcrF family HKK55_RS10920 PF00873 AcrB/AcrD/AcrF family HKK55_RS10925 PF13533 Biotin-lipoyl like HKK55_RS10930 PF08534 Redoxin HKK55_RS10945 PF11769 Protein of unknown function (DUF3313) HKK55_RS10955 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKK55_RS10970 PF01177 Asp/Glu/Hydantoin racemase HKK55_RS10975 PF00583 Acetyltransferase (GNAT) family HKK55_RS10980 PF02899 Phage integrase, N-terminal SAM-like domain HKK55_RS10980 PF00589 Phage integrase family HKK55_RS10990 PF07724 AAA domain (Cdc48 subfamily) HKK55_RS10990 PF00004 ATPase family associated with various cellular activities (AAA) HKK55_RS10990 PF02861 Clp amino terminal domain, pathogenicity island component HKK55_RS10990 PF10431 C-terminal, D2-small domain, of ClpB protein HKK55_RS10990 PF17871 AAA lid domain HKK55_RS11000 PF13087 AAA domain HKK55_RS11000 PF13195 Protein of unknown function (DUF4011) HKK55_RS11000 PF13086 AAA domain HKK55_RS11000 PF13087 AAA domain HKK55_RS11000 PF13195 Protein of unknown function (DUF4011) HKK55_RS11000 PF13086 AAA domain HKK55_RS11010 PF00535 Glycosyl transferase family 2 HKK55_RS11015 PF01370 NAD dependent epimerase/dehydratase family HKK55_RS11015 PF02911 Formyl transferase, C-terminal domain HKK55_RS11015 PF00551 Formyl transferase HKK55_RS11020 PF01522 Polysaccharide deacetylase HKK55_RS11025 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HKK55_RS11030 PF00892 EamA-like transporter family HKK55_RS11035 PF00893 Small Multidrug Resistance protein HKK55_RS11040 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HKK55_RS11040 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HKK55_RS11040 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HKK55_RS11060 PF01804 Penicillin amidase HKK55_RS11075 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS11085 PF00005 ABC transporter HKK55_RS11105 PF03466 LysR substrate binding domain HKK55_RS11105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS11110 PF00248 Aldo/keto reductase family HKK55_RS11115 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS11120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS11120 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS11120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS11125 PF02803 Thiolase, C-terminal domain HKK55_RS11125 PF00108 Thiolase, N-terminal domain HKK55_RS11130 PF00106 short chain dehydrogenase HKK55_RS11135 PF00501 AMP-binding enzyme HKK55_RS11135 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS11140 PF01062 Bestrophin, RFP-TM, chloride channel HKK55_RS11150 PF06745 KaiC HKK55_RS11155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS11155 PF00072 Response regulator receiver domain HKK55_RS11155 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS11155 PF13188 PAS domain HKK55_RS11155 PF08448 PAS fold HKK55_RS11165 PF00072 Response regulator receiver domain HKK55_RS11165 PF00158 Sigma-54 interaction domain HKK55_RS11170 PF00072 Response regulator receiver domain HKK55_RS11170 PF09456 RcsC Alpha-Beta-Loop (ABL) HKK55_RS11170 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS11175 PF01339 CheB methylesterase HKK55_RS11180 PF03705 CheR methyltransferase, all-alpha domain HKK55_RS11180 PF01739 CheR methyltransferase, SAM binding domain HKK55_RS11185 PF01627 Hpt domain HKK55_RS11185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS11185 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS11185 PF00072 Response regulator receiver domain HKK55_RS11195 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS11195 PF00072 Response regulator receiver domain HKK55_RS11210 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS11215 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS11220 PF17912 MalK OB fold domain HKK55_RS11220 PF00005 ABC transporter HKK55_RS11225 PF01232 Mannitol dehydrogenase Rossmann domain HKK55_RS11225 PF08125 Mannitol dehydrogenase C-terminal domain HKK55_RS11230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HKK55_RS11230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HKK55_RS11235 PF00294 pfkB family carbohydrate kinase HKK55_RS11240 PF00230 Major intrinsic protein HKK55_RS11255 PF03974 Ecotin HKK55_RS11260 PF00585 C-terminal regulatory domain of Threonine dehydratase HKK55_RS11260 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS11270 PF00557 Metallopeptidase family M24 HKK55_RS11275 PF01544 CorA-like Mg2+ transporter protein HKK55_RS11280 PF18030 RimK PreATP-grasp domain HKK55_RS11280 PF08443 RimK-like ATP-grasp domain HKK55_RS11290 PF00296 Luciferase-like monooxygenase HKK55_RS11295 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS11295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS11300 PF01925 Sulfite exporter TauE/SafE HKK55_RS11305 PF00293 NUDIX domain HKK55_RS11305 PF09297 NADH pyrophosphatase zinc ribbon domain HKK55_RS11305 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HKK55_RS11310 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS11315 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS11315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS11315 PF00672 HAMP domain HKK55_RS11320 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS11320 PF00072 Response regulator receiver domain HKK55_RS11325 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS11325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS11330 PF00873 AcrB/AcrD/AcrF family HKK55_RS11355 PF00356 Bacterial regulatory proteins, lacI family HKK55_RS11365 PF00294 pfkB family carbohydrate kinase HKK55_RS11375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK55_RS11375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS11380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS11380 PF00672 HAMP domain HKK55_RS11380 PF12729 Four helix bundle sensory module for signal transduction HKK55_RS11385 PF00491 Arginase family HKK55_RS11390 PF13416 Bacterial extracellular solute-binding protein HKK55_RS11400 PF00860 Permease family HKK55_RS11415 PF00795 Carbon-nitrogen hydrolase HKK55_RS11420 PF03466 LysR substrate binding domain HKK55_RS11420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS11435 PF02615 Malate/L-lactate dehydrogenase HKK55_RS11480 PF02954 Bacterial regulatory protein, Fis family HKK55_RS11480 PF00158 Sigma-54 interaction domain HKK55_RS11480 PF00072 Response regulator receiver domain HKK55_RS11490 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HKK55_RS11500 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HKK55_RS11500 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HKK55_RS11505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HKK55_RS11505 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HKK55_RS11515 PF00884 Sulfatase HKK55_RS11520 PF07660 Secretin and TonB N terminus short domain HKK55_RS11520 PF00593 TonB dependent receptor HKK55_RS11520 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS11530 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS11530 PF00072 Response regulator receiver domain HKK55_RS11535 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS11535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS11535 PF00672 HAMP domain HKK55_RS11540 PF02417 Chromate transporter HKK55_RS11545 PF00583 Acetyltransferase (GNAT) family HKK55_RS11550 PF03969 AFG1-like ATPase HKK55_RS11565 PF00248 Aldo/keto reductase family HKK55_RS11580 PF01433 Peptidase family M1 domain HKK55_RS11580 PF11940 Domain of unknown function (DUF3458) Ig-like fold HKK55_RS11580 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HKK55_RS11590 PF07023 Protein of unknown function (DUF1315) HKK55_RS11595 PF01694 Rhomboid family HKK55_RS11595 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HKK55_RS11600 PF00149 Calcineurin-like phosphoesterase HKK55_RS11605 PF01513 ATP-NAD kinase HKK55_RS11620 PF13519 von Willebrand factor type A domain HKK55_RS11620 PF07728 AAA domain (dynein-related subfamily) HKK55_RS11620 PF17863 AAA lid domain HKK55_RS11625 PF02514 CobN/Magnesium Chelatase HKK55_RS11630 PF07683 Cobalamin synthesis protein cobW C-terminal domain HKK55_RS11630 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKK55_RS11635 PF01638 HxlR-like helix-turn-helix HKK55_RS11640 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK55_RS11640 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK55_RS11660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKK55_RS11665 PF01521 Iron-sulphur cluster biosynthesis HKK55_RS11665 PF01106 NifU-like domain HKK55_RS11675 PF00809 Pterin binding enzyme HKK55_RS11675 PF02310 B12 binding domain HKK55_RS11675 PF02607 B12 binding domain HKK55_RS11675 PF02965 Vitamin B12 dependent methionine synthase, activation domain HKK55_RS11675 PF02574 Homocysteine S-methyltransferase HKK55_RS11690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HKK55_RS11690 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HKK55_RS11700 PF01548 Transposase HKK55_RS11700 PF02371 Transposase IS116/IS110/IS902 family HKK55_RS11710 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS11710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK55_RS11715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKK55_RS11715 PF00205 Thiamine pyrophosphate enzyme, central domain HKK55_RS11715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKK55_RS11720 PF03466 LysR substrate binding domain HKK55_RS11720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS11725 PF02525 Flavodoxin-like fold HKK55_RS11730 PF03358 NADPH-dependent FMN reductase HKK55_RS11760 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HKK55_RS11760 PF01276 Orn/Lys/Arg decarboxylase, major domain HKK55_RS11760 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HKK55_RS11765 PF00929 Exonuclease HKK55_RS11780 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS11780 PF00107 Zinc-binding dehydrogenase HKK55_RS11785 PF12833 Helix-turn-helix domain HKK55_RS11785 PF10114 Sensory domain found in PocR HKK55_RS11790 PF03009 Glycerophosphoryl diester phosphodiesterase family HKK55_RS11795 PF00075 RNase H HKK55_RS11805 PF16123 Hydroxyacylglutathione hydrolase C-terminus HKK55_RS11805 PF00753 Metallo-beta-lactamase superfamily HKK55_RS11810 PF01476 LysM domain HKK55_RS11810 PF01464 Transglycosylase SLT domain HKK55_RS11815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS11820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS11825 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS11830 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS11830 PF12911 N-terminal TM domain of oligopeptide transport permease C HKK55_RS11835 PF00005 ABC transporter HKK55_RS11835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKK55_RS11840 PF12833 Helix-turn-helix domain HKK55_RS11845 PF01810 LysE type translocator HKK55_RS11850 PF07729 FCD domain HKK55_RS11850 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS11855 PF07690 Major Facilitator Superfamily HKK55_RS11860 PF13378 Enolase C-terminal domain-like HKK55_RS11860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HKK55_RS11865 PF03573 outer membrane porin, OprD family HKK55_RS11875 PF00293 NUDIX domain HKK55_RS11880 PF00455 DeoR C terminal sensor domain HKK55_RS11880 PF08220 DeoR-like helix-turn-helix domain HKK55_RS11885 PF12146 Serine aminopeptidase, S33 HKK55_RS11890 PF01070 FMN-dependent dehydrogenase HKK55_RS11905 PF08220 DeoR-like helix-turn-helix domain HKK55_RS11905 PF00455 DeoR C terminal sensor domain HKK55_RS11910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK55_RS11910 PF01842 ACT domain HKK55_RS11910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS11920 PF01638 HxlR-like helix-turn-helix HKK55_RS11940 PF02630 SCO1/SenC HKK55_RS11950 PF03573 outer membrane porin, OprD family HKK55_RS11955 PF00206 Lyase HKK55_RS11955 PF14698 Argininosuccinate lyase C-terminal HKK55_RS11960 PF00375 Sodium:dicarboxylate symporter family HKK55_RS11965 PF03466 LysR substrate binding domain HKK55_RS11965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS11990 PF01042 Endoribonuclease L-PSP HKK55_RS12000 PF07687 Peptidase dimerisation domain HKK55_RS12000 PF01546 Peptidase family M20/M25/M40 HKK55_RS12010 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HKK55_RS12040 PF01678 Diaminopimelate epimerase HKK55_RS12045 PF02583 Metal-sensitive transcriptional repressor HKK55_RS12050 PF01545 Cation efflux family HKK55_RS12060 PF01471 Putative peptidoglycan binding domain HKK55_RS12060 PF03734 L,D-transpeptidase catalytic domain HKK55_RS12070 PF02633 Creatinine amidohydrolase HKK55_RS12090 PF14834 Glutathione S-transferase, C-terminal domain HKK55_RS12090 PF02798 Glutathione S-transferase, N-terminal domain HKK55_RS12105 PF00202 Aminotransferase class-III HKK55_RS12110 PF01717 Cobalamin-independent synthase, Catalytic domain HKK55_RS12110 PF08267 Cobalamin-independent synthase, N-terminal domain HKK55_RS12115 PF14525 AraC-binding-like domain HKK55_RS12115 PF12833 Helix-turn-helix domain HKK55_RS12125 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HKK55_RS12125 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS12125 PF00034 Cytochrome c HKK55_RS12130 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS12130 PF01799 [2Fe-2S] binding domain HKK55_RS12135 PF12802 MarR family HKK55_RS12145 PF01494 FAD binding domain HKK55_RS12150 PF00561 alpha/beta hydrolase fold HKK55_RS12155 PF17645 Arylmalonate decarboxylase HKK55_RS12160 PF00857 Isochorismatase family HKK55_RS12165 PF07690 Major Facilitator Superfamily HKK55_RS12170 PF00155 Aminotransferase class I and II HKK55_RS12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12175 PF03459 TOBE domain HKK55_RS12185 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS12190 PF00005 ABC transporter HKK55_RS12195 PF00593 TonB dependent receptor HKK55_RS12195 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS12200 PF04773 FecR protein HKK55_RS12200 PF16220 Domain of unknown function (DUF4880) HKK55_RS12205 PF08281 Sigma-70, region 4 HKK55_RS12205 PF04542 Sigma-70 region 2 HKK55_RS12210 PF12804 MobA-like NTP transferase domain HKK55_RS12210 PF14602 Hexapeptide repeat of succinyl-transferase HKK55_RS12210 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS12215 PF00474 Sodium:solute symporter family HKK55_RS12220 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS12225 PF05199 GMC oxidoreductase HKK55_RS12225 PF00732 GMC oxidoreductase HKK55_RS12230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HKK55_RS12230 PF13378 Enolase C-terminal domain-like HKK55_RS12235 PF07690 Major Facilitator Superfamily HKK55_RS12240 PF00171 Aldehyde dehydrogenase family HKK55_RS12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12245 PF03466 LysR substrate binding domain HKK55_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12255 PF03466 LysR substrate binding domain HKK55_RS12260 PF00083 Sugar (and other) transporter HKK55_RS12265 PF00171 Aldehyde dehydrogenase family HKK55_RS12270 PF00248 Aldo/keto reductase family HKK55_RS12280 PF00268 Ribonucleotide reductase, small chain HKK55_RS12290 PF00456 Transketolase, thiamine diphosphate binding domain HKK55_RS12290 PF17831 Pyruvate dehydrogenase E1 component middle domain HKK55_RS12300 PF01066 CDP-alcohol phosphatidyltransferase HKK55_RS12305 PF01925 Sulfite exporter TauE/SafE HKK55_RS12310 PF08241 Methyltransferase domain HKK55_RS12315 PF00654 Voltage gated chloride channel HKK55_RS12320 PF03695 Uncharacterised protein family (UPF0149) HKK55_RS12320 PF02810 SEC-C motif HKK55_RS12330 PF07237 Protein of unknown function (DUF1428) HKK55_RS12335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKK55_RS12345 PF02525 Flavodoxin-like fold HKK55_RS12365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12365 PF03466 LysR substrate binding domain HKK55_RS12370 PF07690 Major Facilitator Superfamily HKK55_RS12380 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS12380 PF17151 Periplasmic sensor domain HKK55_RS12385 PF00561 alpha/beta hydrolase fold HKK55_RS12395 PF04542 Sigma-70 region 2 HKK55_RS12395 PF08281 Sigma-70, region 4 HKK55_RS12420 PF13581 Histidine kinase-like ATPase domain HKK55_RS12420 PF13426 PAS domain HKK55_RS12420 PF07536 HWE histidine kinase HKK55_RS12425 PF08946 Osmosensory transporter coiled coil HKK55_RS12425 PF00083 Sugar (and other) transporter HKK55_RS12440 PF00710 Asparaginase, N-terminal HKK55_RS12440 PF17763 Glutaminase/Asparaginase C-terminal domain HKK55_RS12450 PF07690 Major Facilitator Superfamily HKK55_RS12455 PF03466 LysR substrate binding domain HKK55_RS12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12470 PF00482 Type II secretion system (T2SS), protein F HKK55_RS12475 PF00437 Type II/IV secretion system protein HKK55_RS12480 PF03958 Bacterial type II/III secretion system short domain HKK55_RS12480 PF00263 Bacterial type II and III secretion system protein HKK55_RS12495 PF03934 Type II secretion system (T2SS), protein K HKK55_RS12500 PF08334 Type II secretion system (T2SS), protein G HKK55_RS12500 PF07963 Prokaryotic N-terminal methylation motif HKK55_RS12505 PF07963 Prokaryotic N-terminal methylation motif HKK55_RS12505 PF02501 Type II secretion system (T2SS), protein I HKK55_RS12515 PF12019 Type II transport protein GspH HKK55_RS12515 PF07963 Prokaryotic N-terminal methylation motif HKK55_RS12520 PF11612 Type II secretion system (T2SS), protein J HKK55_RS12520 PF07963 Prokaryotic N-terminal methylation motif HKK55_RS12545 PF01810 LysE type translocator HKK55_RS12555 PF14759 Reductase C-terminal HKK55_RS12555 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS12570 PF00356 Bacterial regulatory proteins, lacI family HKK55_RS12575 PF13426 PAS domain HKK55_RS12575 PF02954 Bacterial regulatory protein, Fis family HKK55_RS12575 PF00158 Sigma-54 interaction domain HKK55_RS12580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HKK55_RS12580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HKK55_RS12590 PF13407 Periplasmic binding protein domain HKK55_RS12600 PF02673 Bacitracin resistance protein BacA HKK55_RS12610 PF00384 Molybdopterin oxidoreductase HKK55_RS12610 PF01568 Molydopterin dinucleotide binding domain HKK55_RS12615 PF04055 Radical SAM superfamily HKK55_RS12615 PF06463 Molybdenum Cofactor Synthesis C HKK55_RS12620 PF03454 MoeA C-terminal region (domain IV) HKK55_RS12620 PF03453 MoeA N-terminal region (domain I and II) HKK55_RS12620 PF00994 Probable molybdopterin binding domain HKK55_RS12625 PF00994 Probable molybdopterin binding domain HKK55_RS12630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12630 PF03466 LysR substrate binding domain HKK55_RS12640 PF13416 Bacterial extracellular solute-binding protein HKK55_RS12645 PF00795 Carbon-nitrogen hydrolase HKK55_RS12650 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS12650 PF00072 Response regulator receiver domain HKK55_RS12655 PF03576 Peptidase family S58 HKK55_RS12665 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS12670 PF00005 ABC transporter HKK55_RS12670 PF08402 TOBE domain HKK55_RS12685 PF00072 Response regulator receiver domain HKK55_RS12685 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS12690 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS12690 PF08521 Two-component sensor kinase N-terminal HKK55_RS12695 PF00171 Aldehyde dehydrogenase family HKK55_RS12700 PF00732 GMC oxidoreductase HKK55_RS12700 PF05199 GMC oxidoreductase HKK55_RS12705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12705 PF03466 LysR substrate binding domain HKK55_RS12715 PF01037 Lrp/AsnC ligand binding domain HKK55_RS12720 PF00324 Amino acid permease HKK55_RS12725 PF00155 Aminotransferase class I and II HKK55_RS12730 PF03328 HpcH/HpaI aldolase/citrate lyase family HKK55_RS12735 PF01037 Lrp/AsnC ligand binding domain HKK55_RS12745 PF14525 AraC-binding-like domain HKK55_RS12745 PF12833 Helix-turn-helix domain HKK55_RS12750 PF00106 short chain dehydrogenase HKK55_RS12755 PF00970 Oxidoreductase FAD-binding domain HKK55_RS12755 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS12755 PF00175 Oxidoreductase NAD-binding domain HKK55_RS12760 PF00866 Ring hydroxylating beta subunit HKK55_RS12765 PF00355 Rieske [2Fe-2S] domain HKK55_RS12765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HKK55_RS12770 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS12770 PF00107 Zinc-binding dehydrogenase HKK55_RS12775 PF03466 LysR substrate binding domain HKK55_RS12775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12780 PF02515 CoA-transferase family III HKK55_RS12790 PF02656 Domain of unknown function (DUF202) HKK55_RS12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12795 PF03466 LysR substrate binding domain HKK55_RS12805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS12805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS12805 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS12810 PF00501 AMP-binding enzyme HKK55_RS12810 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS12815 PF03466 LysR substrate binding domain HKK55_RS12815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12830 PF07044 Protein of unknown function (DUF1329) HKK55_RS12835 PF14870 Photosynthesis system II assembly factor YCF48 HKK55_RS12840 PF03176 MMPL family HKK55_RS12845 PF00005 ABC transporter HKK55_RS12850 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS12855 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS12860 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS12865 PF07687 Peptidase dimerisation domain HKK55_RS12865 PF01546 Peptidase family M20/M25/M40 HKK55_RS12870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS12870 PF03466 LysR substrate binding domain HKK55_RS12885 PF07690 Major Facilitator Superfamily HKK55_RS12890 PF00107 Zinc-binding dehydrogenase HKK55_RS12890 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS12900 PF05199 GMC oxidoreductase HKK55_RS12900 PF00732 GMC oxidoreductase HKK55_RS12905 PF01645 Conserved region in glutamate synthase HKK55_RS12910 PF03061 Thioesterase superfamily HKK55_RS12915 PF00034 Cytochrome c HKK55_RS12915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS12920 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS12920 PF01799 [2Fe-2S] binding domain HKK55_RS12925 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HKK55_RS12930 PF01676 Metalloenzyme superfamily HKK55_RS12935 PF00591 Glycosyl transferase family, a/b domain HKK55_RS12935 PF02885 Glycosyl transferase family, helical bundle domain HKK55_RS12935 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HKK55_RS12940 PF01773 Na+ dependent nucleoside transporter N-terminus HKK55_RS12940 PF07662 Na+ dependent nucleoside transporter C-terminus HKK55_RS12940 PF07670 Nucleoside recognition HKK55_RS12945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HKK55_RS12950 PF00005 ABC transporter HKK55_RS12960 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS12975 PF12697 Alpha/beta hydrolase family HKK55_RS12980 PF09339 IclR helix-turn-helix domain HKK55_RS12980 PF01614 Bacterial transcriptional regulator HKK55_RS12990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKK55_RS12990 PF00205 Thiamine pyrophosphate enzyme, central domain HKK55_RS12990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKK55_RS12995 PF03447 Homoserine dehydrogenase, NAD binding domain HKK55_RS12995 PF01958 Domain of unknown function DUF108 HKK55_RS13000 PF00171 Aldehyde dehydrogenase family HKK55_RS13010 PF01494 FAD binding domain HKK55_RS13025 PF00355 Rieske [2Fe-2S] domain HKK55_RS13035 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS13035 PF00970 Oxidoreductase FAD-binding domain HKK55_RS13045 PF01593 Flavin containing amine oxidoreductase HKK55_RS13050 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS13060 PF07969 Amidohydrolase family HKK55_RS13070 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKK55_RS13070 PF08548 Peptidase M10 serralysin C terminal HKK55_RS13080 PF00593 TonB dependent receptor HKK55_RS13080 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS13095 PF00360 Phytochrome region HKK55_RS13095 PF01590 GAF domain HKK55_RS13095 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS13095 PF00563 EAL domain HKK55_RS13100 PF07690 Major Facilitator Superfamily HKK55_RS13105 PF00924 Mechanosensitive ion channel HKK55_RS13105 PF12794 Mechanosensitive ion channel inner membrane domain 1 HKK55_RS13105 PF12795 Mechanosensitive ion channel porin domain HKK55_RS13120 PF00899 ThiF family HKK55_RS13125 PF07690 Major Facilitator Superfamily HKK55_RS13130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS13130 PF03466 LysR substrate binding domain HKK55_RS13145 PF01066 CDP-alcohol phosphatidyltransferase HKK55_RS13150 PF01541 GIY-YIG catalytic domain HKK55_RS13150 PF08459 UvrC Helix-hairpin-helix N-terminal HKK55_RS13150 PF02151 UvrB/uvrC motif HKK55_RS13155 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS13155 PF00072 Response regulator receiver domain HKK55_RS13170 PF00795 Carbon-nitrogen hydrolase HKK55_RS13175 PF00793 DAHP synthetase I family HKK55_RS13180 PF05698 Bacterial trigger factor protein (TF) C-terminus HKK55_RS13185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS13190 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS13195 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS13195 PF12911 N-terminal TM domain of oligopeptide transport permease C HKK55_RS13200 PF00005 ABC transporter HKK55_RS13200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKK55_RS13205 PF00158 Sigma-54 interaction domain HKK55_RS13205 PF02954 Bacterial regulatory protein, Fis family HKK55_RS13205 PF00989 PAS fold HKK55_RS13215 PF00106 short chain dehydrogenase HKK55_RS13220 PF00501 AMP-binding enzyme HKK55_RS13220 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS13225 PF00072 Response regulator receiver domain HKK55_RS13225 PF13188 PAS domain HKK55_RS13225 PF08448 PAS fold HKK55_RS13225 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS13235 PF00294 pfkB family carbohydrate kinase HKK55_RS13255 PF00005 ABC transporter HKK55_RS13260 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS13265 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS13270 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS13275 PF00085 Thioredoxin HKK55_RS13280 PF02567 Phenazine biosynthesis-like protein HKK55_RS13285 PF03741 Integral membrane protein TerC family HKK55_RS13285 PF03471 Transporter associated domain HKK55_RS13290 PF04198 Putative sugar-binding domain HKK55_RS13295 PF02502 Ribose/Galactose Isomerase HKK55_RS13300 PF00005 ABC transporter HKK55_RS13305 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS13310 PF13407 Periplasmic binding protein domain HKK55_RS13320 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS13320 PF00107 Zinc-binding dehydrogenase HKK55_RS13325 PF02733 Dak1 domain HKK55_RS13330 PF02734 DAK2 domain HKK55_RS13335 PF03466 LysR substrate binding domain HKK55_RS13335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS13340 PF07690 Major Facilitator Superfamily HKK55_RS13345 PF08496 Peptidase family S49 N-terminal HKK55_RS13345 PF01343 Peptidase family S49 HKK55_RS13365 PF07063 Domain of unknown function (DUF1338) HKK55_RS13375 PF02779 Transketolase, pyrimidine binding domain HKK55_RS13375 PF00456 Transketolase, thiamine diphosphate binding domain HKK55_RS13375 PF02780 Transketolase, C-terminal domain HKK55_RS13385 PF00005 ABC transporter HKK55_RS13405 PF12399 Branched-chain amino acid ATP-binding cassette transporter HKK55_RS13405 PF00005 ABC transporter HKK55_RS13415 PF00296 Luciferase-like monooxygenase HKK55_RS13425 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS13425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS13450 PF00361 Proton-conducting membrane transporter HKK55_RS13450 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HKK55_RS13450 PF13244 Domain of unknown function (DUF4040) HKK55_RS13450 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HKK55_RS13455 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HKK55_RS13460 PF00361 Proton-conducting membrane transporter HKK55_RS13470 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HKK55_RS13475 PF03334 Na+/H+ antiporter subunit HKK55_RS13480 PF01406 tRNA synthetases class I (C) catalytic domain HKK55_RS13480 PF09190 DALR domain HKK55_RS13485 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKK55_RS13485 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HKK55_RS13490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HKK55_RS13495 PF00149 Calcineurin-like phosphoesterase HKK55_RS13500 PF07690 Major Facilitator Superfamily HKK55_RS13505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS13505 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS13510 PF02321 Outer membrane efflux protein HKK55_RS13515 PF01047 MarR family HKK55_RS13520 PF04357 TamB, inner membrane protein subunit of TAM complex HKK55_RS13525 PF07244 Surface antigen variable number repeat HKK55_RS13525 PF17243 POTRA domain TamA domain 1 HKK55_RS13525 PF01103 Surface antigen HKK55_RS13535 PF03372 Endonuclease/Exonuclease/phosphatase family HKK55_RS13540 PF12849 PBP superfamily domain HKK55_RS13545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS13545 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS13545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS13550 PF03466 LysR substrate binding domain HKK55_RS13550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS13555 PF13411 MerR HTH family regulatory protein HKK55_RS13560 PF00682 HMGL-like HKK55_RS13565 PF00501 AMP-binding enzyme HKK55_RS13565 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS13570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS13570 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS13570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS13575 PF01039 Carboxyl transferase domain HKK55_RS13585 PF02785 Biotin carboxylase C-terminal domain HKK55_RS13585 PF00289 Biotin carboxylase, N-terminal domain HKK55_RS13585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKK55_RS13585 PF00364 Biotin-requiring enzyme HKK55_RS13600 PF00246 Zinc carboxypeptidase HKK55_RS13600 PF18027 Cytosolic carboxypeptidase N-terminal domain HKK55_RS13610 PF01638 HxlR-like helix-turn-helix HKK55_RS13615 PF07690 Major Facilitator Superfamily HKK55_RS13620 PF01292 Prokaryotic cytochrome b561 HKK55_RS13630 PF04542 Sigma-70 region 2 HKK55_RS13630 PF08281 Sigma-70, region 4 HKK55_RS13675 PF03969 AFG1-like ATPase HKK55_RS13685 PF01709 Transcriptional regulator HKK55_RS13695 PF03466 LysR substrate binding domain HKK55_RS13695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS13700 PF03466 LysR substrate binding domain HKK55_RS13700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS13705 PF00266 Aminotransferase class-V HKK55_RS13715 PF01292 Prokaryotic cytochrome b561 HKK55_RS13725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK55_RS13725 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS13730 PF00795 Carbon-nitrogen hydrolase HKK55_RS13735 PF12833 Helix-turn-helix domain HKK55_RS13735 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HKK55_RS13745 PF03466 LysR substrate binding domain HKK55_RS13745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS13750 PF07690 Major Facilitator Superfamily HKK55_RS13755 PF00639 PPIC-type PPIASE domain HKK55_RS13755 PF09312 SurA N-terminal domain HKK55_RS13760 PF00216 Bacterial DNA-binding protein HKK55_RS13765 PF00004 ATPase family associated with various cellular activities (AAA) HKK55_RS13765 PF05362 Lon protease (S16) C-terminal proteolytic domain HKK55_RS13765 PF02190 ATP-dependent protease La (LON) substrate-binding domain HKK55_RS13770 PF07724 AAA domain (Cdc48 subfamily) HKK55_RS13770 PF10431 C-terminal, D2-small domain, of ClpB protein HKK55_RS13770 PF06689 ClpX C4-type zinc finger HKK55_RS13775 PF00574 Clp protease HKK55_RS13780 PF05698 Bacterial trigger factor protein (TF) C-terminus HKK55_RS13780 PF05697 Bacterial trigger factor protein (TF) HKK55_RS13780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK55_RS13805 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HKK55_RS13805 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HKK55_RS13810 PF00768 D-alanyl-D-alanine carboxypeptidase HKK55_RS13830 PF00873 AcrB/AcrD/AcrF family HKK55_RS13835 PF13533 Biotin-lipoyl like HKK55_RS13840 PF02321 Outer membrane efflux protein HKK55_RS13845 PF07687 Peptidase dimerisation domain HKK55_RS13845 PF01546 Peptidase family M20/M25/M40 HKK55_RS13850 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HKK55_RS13855 PF01979 Amidohydrolase family HKK55_RS13860 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HKK55_RS13860 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS13865 PF01180 Dihydroorotate dehydrogenase HKK55_RS13870 PF08362 YcdC-like protein, C-terminal region HKK55_RS13870 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS13875 PF04234 CopC domain HKK55_RS13885 PF01370 NAD dependent epimerase/dehydratase family HKK55_RS13890 PF08450 SMP-30/Gluconolactonase/LRE-like region HKK55_RS13895 PF03480 Bacterial extracellular solute-binding protein, family 7 HKK55_RS13905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HKK55_RS13915 PF13533 Biotin-lipoyl like HKK55_RS13925 PF00005 ABC transporter HKK55_RS13925 PF00664 ABC transporter transmembrane region HKK55_RS13930 PF07660 Secretin and TonB N terminus short domain HKK55_RS13930 PF00593 TonB dependent receptor HKK55_RS13930 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS13955 PF07859 alpha/beta hydrolase fold HKK55_RS13960 PF00501 AMP-binding enzyme HKK55_RS13960 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS13960 PF00668 Condensation domain HKK55_RS13960 PF00550 Phosphopantetheine attachment site HKK55_RS13965 PF07993 Male sterility protein HKK55_RS13965 PF00501 AMP-binding enzyme HKK55_RS13965 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS13965 PF00550 Phosphopantetheine attachment site HKK55_RS13965 PF00668 Condensation domain HKK55_RS13985 PF07690 Major Facilitator Superfamily HKK55_RS13990 PF13533 Biotin-lipoyl like HKK55_RS13995 PF02321 Outer membrane efflux protein HKK55_RS14010 PF00723 Glycosyl hydrolases family 15 HKK55_RS14020 PF01965 DJ-1/PfpI family HKK55_RS14020 PF12833 Helix-turn-helix domain HKK55_RS14025 PF01965 DJ-1/PfpI family HKK55_RS14030 PF01810 LysE type translocator HKK55_RS14035 PF02397 Bacterial sugar transferase HKK55_RS14040 PF00483 Nucleotidyl transferase HKK55_RS14040 PF01050 Mannose-6-phosphate isomerase HKK55_RS14090 PF03023 Lipid II flippase MurJ HKK55_RS14100 PF01593 Flavin containing amine oxidoreductase HKK55_RS14115 PF13302 Acetyltransferase (GNAT) domain HKK55_RS14120 PF00136 DNA polymerase family B HKK55_RS14120 PF03104 DNA polymerase family B, exonuclease domain HKK55_RS14125 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS14125 PF00593 TonB dependent receptor HKK55_RS14140 PF01447 Thermolysin metallopeptidase, catalytic domain HKK55_RS14140 PF02868 Thermolysin metallopeptidase, alpha-helical domain HKK55_RS14140 PF16485 Protealysin propeptide HKK55_RS14160 PF00905 Penicillin binding protein transpeptidase domain HKK55_RS14160 PF03717 Penicillin-binding Protein dimerisation domain HKK55_RS14165 PF00296 Luciferase-like monooxygenase HKK55_RS14170 PF00171 Aldehyde dehydrogenase family HKK55_RS14175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS14175 PF03466 LysR substrate binding domain HKK55_RS14205 PF00892 EamA-like transporter family HKK55_RS14215 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS14225 PF01323 DSBA-like thioredoxin domain HKK55_RS14230 PF00557 Metallopeptidase family M24 HKK55_RS14230 PF01321 Creatinase/Prolidase N-terminal domain HKK55_RS14235 PF00266 Aminotransferase class-V HKK55_RS14245 PF07995 Glucose / Sorbosone dehydrogenase HKK55_RS14255 PF03358 NADPH-dependent FMN reductase HKK55_RS14260 PF00296 Luciferase-like monooxygenase HKK55_RS14265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS14265 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS14270 PF00158 Sigma-54 interaction domain HKK55_RS14280 PF09278 MerR, DNA binding HKK55_RS14280 PF00376 MerR family regulatory protein HKK55_RS14285 PF03180 NLPA lipoprotein HKK55_RS14290 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS14295 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS14295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS14305 PF00561 alpha/beta hydrolase fold HKK55_RS14310 PF00574 Clp protease HKK55_RS14315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS14315 PF03466 LysR substrate binding domain HKK55_RS14325 PF00694 Aconitase C-terminal domain HKK55_RS14330 PF00330 Aconitase family (aconitate hydratase) HKK55_RS14360 PF00005 ABC transporter HKK55_RS14365 PF00950 ABC 3 transport family HKK55_RS14380 PF01557 Fumarylacetoacetate (FAA) hydrolase family HKK55_RS14385 PF01557 Fumarylacetoacetate (FAA) hydrolase family HKK55_RS14390 PF00171 Aldehyde dehydrogenase family HKK55_RS14395 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HKK55_RS14400 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase HKK55_RS14405 PF07690 Major Facilitator Superfamily HKK55_RS14410 PF01557 Fumarylacetoacetate (FAA) hydrolase family HKK55_RS14415 PF03328 HpcH/HpaI aldolase/citrate lyase family HKK55_RS14420 PF01047 MarR family HKK55_RS14425 PF01266 FAD dependent oxidoreductase HKK55_RS14435 PF10703 MoaF N-terminal domain HKK55_RS14435 PF17409 MoaF C-terminal domain HKK55_RS14450 PF05593 RHS Repeat HKK55_RS14450 PF03527 RHS protein HKK55_RS14470 PF12852 Cupin HKK55_RS14470 PF12833 Helix-turn-helix domain HKK55_RS14480 PF13520 Amino acid permease HKK55_RS14490 PF01613 Flavin reductase like domain HKK55_RS14495 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS14500 PF00171 Aldehyde dehydrogenase family HKK55_RS14505 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS14505 PF03472 Autoinducer binding domain HKK55_RS14510 PF00765 Autoinducer synthase HKK55_RS14515 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK55_RS14515 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK55_RS14550 PF00037 4Fe-4S binding domain HKK55_RS14550 PF11953 Domain of unknown function (DUF3470) HKK55_RS14560 PF03649 Uncharacterised protein family (UPF0014) HKK55_RS14565 PF00005 ABC transporter HKK55_RS14575 PF10397 Adenylosuccinate lyase C-terminus HKK55_RS14575 PF00206 Lyase HKK55_RS14580 PF10397 Adenylosuccinate lyase C-terminus HKK55_RS14580 PF00206 Lyase HKK55_RS14605 PF00403 Heavy-metal-associated domain HKK55_RS14610 PF02321 Outer membrane efflux protein HKK55_RS14615 PF00873 AcrB/AcrD/AcrF family HKK55_RS14620 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS14620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS14625 PF04185 Phosphoesterase family HKK55_RS14625 PF05506 Domain of unknown function (DUF756) HKK55_RS14650 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HKK55_RS14680 PF09669 Phage regulatory protein Rha (Phage_pRha) HKK55_RS14680 PF10549 ORF11CD3 domain HKK55_RS14835 PF01638 HxlR-like helix-turn-helix HKK55_RS14995 PF00145 C-5 cytosine-specific DNA methylase HKK55_RS15055 PF00216 Bacterial DNA-binding protein HKK55_RS15060 PF03483 B3/4 domain HKK55_RS15060 PF03484 tRNA synthetase B5 domain HKK55_RS15060 PF03147 Ferredoxin-fold anticodon binding domain HKK55_RS15060 PF01588 Putative tRNA binding domain HKK55_RS15060 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HKK55_RS15065 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HKK55_RS15065 PF01409 tRNA synthetases class II core domain (F) HKK55_RS15070 PF00453 Ribosomal protein L20 HKK55_RS15075 PF01632 Ribosomal protein L35 HKK55_RS15080 PF00707 Translation initiation factor IF-3, C-terminal domain HKK55_RS15080 PF05198 Translation initiation factor IF-3, N-terminal domain HKK55_RS15085 PF02824 TGS domain HKK55_RS15085 PF03129 Anticodon binding domain HKK55_RS15085 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKK55_RS15085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKK55_RS15095 PF00313 'Cold-shock' DNA-binding domain HKK55_RS15115 PF01156 Inosine-uridine preferring nucleoside hydrolase HKK55_RS15120 PF05025 RbsD / FucU transport protein family HKK55_RS15125 PF00294 pfkB family carbohydrate kinase HKK55_RS15130 PF00356 Bacterial regulatory proteins, lacI family HKK55_RS15135 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS15140 PF00005 ABC transporter HKK55_RS15145 PF13407 Periplasmic binding protein domain HKK55_RS15150 PF17763 Glutaminase/Asparaginase C-terminal domain HKK55_RS15150 PF00710 Asparaginase, N-terminal HKK55_RS15160 PF04231 Endonuclease I HKK55_RS15170 PF02599 Global regulator protein family HKK55_RS15185 PF13419 Haloacid dehalogenase-like hydrolase HKK55_RS15195 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS15195 PF00072 Response regulator receiver domain HKK55_RS15200 PF00672 HAMP domain HKK55_RS15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS15200 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS15205 PF01470 Pyroglutamyl peptidase HKK55_RS15225 PF01266 FAD dependent oxidoreductase HKK55_RS15230 PF13478 XdhC Rossmann domain HKK55_RS15230 PF02625 XdhC and CoxI family HKK55_RS15235 PF00034 Cytochrome c HKK55_RS15235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS15240 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS15240 PF01799 [2Fe-2S] binding domain HKK55_RS15245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HKK55_RS15245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HKK55_RS15270 PF01053 Cys/Met metabolism PLP-dependent enzyme HKK55_RS15275 PF00156 Phosphoribosyl transferase domain HKK55_RS15280 PF02674 Colicin V production protein HKK55_RS15285 PF05036 Sporulation related domain HKK55_RS15290 PF02875 Mur ligase family, glutamate ligase domain HKK55_RS15290 PF08245 Mur ligase middle domain HKK55_RS15295 PF17848 Acetyl-coA carboxylase zinc finger domain HKK55_RS15295 PF01039 Carboxyl transferase domain HKK55_RS15300 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HKK55_RS15305 PF01416 tRNA pseudouridine synthase HKK55_RS15315 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKK55_RS15315 PF02774 Semialdehyde dehydrogenase, dimerisation domain HKK55_RS15320 PF02371 Transposase IS116/IS110/IS902 family HKK55_RS15320 PF01548 Transposase HKK55_RS15325 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKK55_RS15325 PF02774 Semialdehyde dehydrogenase, dimerisation domain HKK55_RS15330 PF00180 Isocitrate/isopropylmalate dehydrogenase HKK55_RS15335 PF08241 Methyltransferase domain HKK55_RS15340 PF00694 Aconitase C-terminal domain HKK55_RS15345 PF00330 Aconitase family (aconitate hydratase) HKK55_RS15350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS15355 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS15355 PF00563 EAL domain HKK55_RS15355 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS15370 PF01207 Dihydrouridine synthase (Dus) HKK55_RS15380 PF00561 alpha/beta hydrolase fold HKK55_RS15410 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKK55_RS15415 PF13533 Biotin-lipoyl like HKK55_RS15420 PF07690 Major Facilitator Superfamily HKK55_RS15425 PF02151 UvrB/uvrC motif HKK55_RS15425 PF04851 Type III restriction enzyme, res subunit HKK55_RS15425 PF00271 Helicase conserved C-terminal domain HKK55_RS15425 PF12344 Ultra-violet resistance protein B HKK55_RS15425 PF17757 UvrB interaction domain HKK55_RS15430 PF00155 Aminotransferase class I and II HKK55_RS15495 PF08946 Osmosensory transporter coiled coil HKK55_RS15495 PF00083 Sugar (and other) transporter HKK55_RS15505 PF04134 Protein of unknown function, DUF393 HKK55_RS15525 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS15530 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS15535 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS15545 PF00005 ABC transporter HKK55_RS15550 PF01380 SIS domain HKK55_RS15550 PF01418 Helix-turn-helix domain, rpiR family HKK55_RS15560 PF04816 tRNA (adenine(22)-N(1))-methyltransferase HKK55_RS15565 PF01062 Bestrophin, RFP-TM, chloride channel HKK55_RS15570 PF07690 Major Facilitator Superfamily HKK55_RS15575 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS15580 PF03466 LysR substrate binding domain HKK55_RS15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS15590 PF01022 Bacterial regulatory protein, arsR family HKK55_RS15600 PF02798 Glutathione S-transferase, N-terminal domain HKK55_RS15605 PF03167 Uracil DNA glycosylase superfamily HKK55_RS15610 PF00563 EAL domain HKK55_RS15610 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS15610 PF13188 PAS domain HKK55_RS15610 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS15630 PF00664 ABC transporter transmembrane region HKK55_RS15630 PF03412 Peptidase C39 family HKK55_RS15630 PF00005 ABC transporter HKK55_RS15665 PF00593 TonB dependent receptor HKK55_RS15665 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS15670 PF01497 Periplasmic binding protein HKK55_RS15675 PF00005 ABC transporter HKK55_RS15680 PF01032 FecCD transport family HKK55_RS15685 PF01032 FecCD transport family HKK55_RS15690 PF00005 ABC transporter HKK55_RS15695 PF04954 Siderophore-interacting protein HKK55_RS15695 PF08021 Siderophore-interacting FAD-binding domain HKK55_RS15695 PF00005 ABC transporter HKK55_RS15695 PF00664 ABC transporter transmembrane region HKK55_RS15705 PF00668 Condensation domain HKK55_RS15705 PF00550 Phosphopantetheine attachment site HKK55_RS15705 PF00501 AMP-binding enzyme HKK55_RS15705 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS15705 PF07993 Male sterility protein HKK55_RS15710 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HKK55_RS15715 PF00501 AMP-binding enzyme HKK55_RS15715 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS15715 PF00550 Phosphopantetheine attachment site HKK55_RS15715 PF00668 Condensation domain HKK55_RS15720 PF00425 chorismate binding enzyme HKK55_RS15725 PF00501 AMP-binding enzyme HKK55_RS15725 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS15730 PF00282 Pyridoxal-dependent decarboxylase conserved domain HKK55_RS15740 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HKK55_RS15740 PF18381 YcaO cyclodehydratase C-terminal domain HKK55_RS15780 PF02515 CoA-transferase family III HKK55_RS15785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKK55_RS15785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKK55_RS15785 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HKK55_RS15790 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS15795 PF09339 IclR helix-turn-helix domain HKK55_RS15800 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS15800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS15800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS15805 PF07690 Major Facilitator Superfamily HKK55_RS15810 PF00561 alpha/beta hydrolase fold HKK55_RS15815 PF00860 Permease family HKK55_RS15820 PF07690 Major Facilitator Superfamily HKK55_RS15825 PF03466 LysR substrate binding domain HKK55_RS15825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS15830 PF00202 Aminotransferase class-III HKK55_RS15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS15835 PF03466 LysR substrate binding domain HKK55_RS15845 PF12241 Trans-2-enoyl-CoA reductase catalytic region HKK55_RS15845 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HKK55_RS15845 PF07055 Enoyl reductase FAD binding domain HKK55_RS15855 PF11892 Domain of unknown function (DUF3412) HKK55_RS15855 PF03641 Possible lysine decarboxylase HKK55_RS15855 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HKK55_RS15860 PF03466 LysR substrate binding domain HKK55_RS15860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS15870 PF01042 Endoribonuclease L-PSP HKK55_RS15890 PF03466 LysR substrate binding domain HKK55_RS15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS15900 PF06039 Malate:quinone oxidoreductase (Mqo) HKK55_RS15905 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS15910 PF01261 Xylose isomerase-like TIM barrel HKK55_RS15915 PF00561 alpha/beta hydrolase fold HKK55_RS15925 PF00376 MerR family regulatory protein HKK55_RS15925 PF09278 MerR, DNA binding HKK55_RS15930 PF07690 Major Facilitator Superfamily HKK55_RS15950 PF01207 Dihydrouridine synthase (Dus) HKK55_RS15955 PF02673 Bacitracin resistance protein BacA HKK55_RS15975 PF02397 Bacterial sugar transferase HKK55_RS15980 PF06082 Exopolysaccharide biosynthesis protein YbjH HKK55_RS15995 PF02563 Polysaccharide biosynthesis/export protein HKK55_RS15995 PF10531 SLBB domain HKK55_RS15995 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HKK55_RS16005 PF16363 GDP-mannose 4,6 dehydratase HKK55_RS16010 PF00483 Nucleotidyl transferase HKK55_RS16045 PF00534 Glycosyl transferases group 1 HKK55_RS16045 PF13439 Glycosyltransferase Family 4 HKK55_RS16050 PF13807 G-rich domain on putative tyrosine kinase HKK55_RS16050 PF02706 Chain length determinant protein HKK55_RS16050 PF13614 AAA domain HKK55_RS16055 PF01451 Low molecular weight phosphotyrosine protein phosphatase HKK55_RS16065 PF00923 Transaldolase/Fructose-6-phosphate aldolase HKK55_RS16075 PF02954 Bacterial regulatory protein, Fis family HKK55_RS16075 PF00158 Sigma-54 interaction domain HKK55_RS16075 PF00072 Response regulator receiver domain HKK55_RS16085 PF04333 MlaA lipoprotein HKK55_RS16100 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HKK55_RS16100 PF14489 QueF-like protein HKK55_RS16110 PF00072 Response regulator receiver domain HKK55_RS16110 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS16115 PF00672 HAMP domain HKK55_RS16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS16115 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS16120 PF12704 MacB-like periplasmic core domain HKK55_RS16120 PF02687 FtsX-like permease family HKK55_RS16125 PF00005 ABC transporter HKK55_RS16130 PF02687 FtsX-like permease family HKK55_RS16130 PF12704 MacB-like periplasmic core domain HKK55_RS16140 PF03009 Glycerophosphoryl diester phosphodiesterase family HKK55_RS16145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKK55_RS16145 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS16150 PF02424 ApbE family HKK55_RS16155 PF07690 Major Facilitator Superfamily HKK55_RS16160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HKK55_RS16160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HKK55_RS16165 PF00271 Helicase conserved C-terminal domain HKK55_RS16165 PF17757 UvrB interaction domain HKK55_RS16165 PF03461 TRCF domain HKK55_RS16165 PF00270 DEAD/DEAH box helicase HKK55_RS16165 PF02559 CarD-like/TRCF domain HKK55_RS16175 PF00176 SNF2 family N-terminal domain HKK55_RS16175 PF00271 Helicase conserved C-terminal domain HKK55_RS16175 PF12419 SNF2 Helicase protein HKK55_RS16180 PF00933 Glycosyl hydrolase family 3 N terminal domain HKK55_RS16185 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS16190 PF01726 LexA DNA binding domain HKK55_RS16190 PF00717 Peptidase S24-like HKK55_RS16195 PF03846 Cell division inhibitor SulA HKK55_RS16210 PF01751 Toprim domain HKK55_RS16210 PF01396 Topoisomerase DNA binding C4 zinc finger HKK55_RS16210 PF08272 Topoisomerase I zinc-ribbon-like HKK55_RS16210 PF01131 DNA topoisomerase HKK55_RS16220 PF00108 Thiolase, N-terminal domain HKK55_RS16220 PF02803 Thiolase, C-terminal domain HKK55_RS16225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKK55_RS16225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKK55_RS16225 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS16235 PF00582 Universal stress protein family HKK55_RS16245 PF01464 Transglycosylase SLT domain HKK55_RS16245 PF14718 Soluble lytic murein transglycosylase L domain HKK55_RS16250 PF00005 ABC transporter HKK55_RS16250 PF00664 ABC transporter transmembrane region HKK55_RS16260 PF01548 Transposase HKK55_RS16260 PF02371 Transposase IS116/IS110/IS902 family HKK55_RS16265 PF11890 Domain of unknown function (DUF3410) HKK55_RS16265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS16265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK55_RS16270 PF01554 MatE HKK55_RS16275 PF01206 Sulfurtransferase TusA HKK55_RS16280 PF01728 FtsJ-like methyltransferase HKK55_RS16280 PF18125 RlmM ferredoxin-like domain HKK55_RS16285 PF00330 Aconitase family (aconitate hydratase) HKK55_RS16285 PF00694 Aconitase C-terminal domain HKK55_RS16295 PF08447 PAS fold HKK55_RS16295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS16305 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKK55_RS16320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS16320 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HKK55_RS16325 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKK55_RS16340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS16340 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HKK55_RS16355 PF13746 4Fe-4S dicluster domain HKK55_RS16355 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HKK55_RS16355 PF12801 4Fe-4S binding domain HKK55_RS16365 PF00403 Heavy-metal-associated domain HKK55_RS16380 PF04055 Radical SAM superfamily HKK55_RS16380 PF06969 HemN C-terminal domain HKK55_RS16390 PF13545 Crp-like helix-turn-helix domain HKK55_RS16390 PF00027 Cyclic nucleotide-binding domain HKK55_RS16395 PF00156 Phosphoribosyl transferase domain HKK55_RS16400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS16400 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS16400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS16405 PF13662 Toprim domain HKK55_RS16405 PF02132 RecR protein HKK55_RS16410 PF16884 N-terminal domain of oxidoreductase HKK55_RS16410 PF00107 Zinc-binding dehydrogenase HKK55_RS16415 PF02575 YbaB/EbfC DNA-binding family HKK55_RS16420 PF12169 DNA polymerase III subunits gamma and tau domain III HKK55_RS16420 PF12170 DNA polymerase III tau subunit V interacting with alpha HKK55_RS16420 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HKK55_RS16425 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS16425 PF00563 EAL domain HKK55_RS16425 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS16430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS16430 PF08447 PAS fold HKK55_RS16450 PF03466 LysR substrate binding domain HKK55_RS16450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS16475 PF10005 zinc-ribbon domain HKK55_RS16475 PF15887 Putative zinc-binding metallo-peptidase HKK55_RS16480 PF00533 BRCA1 C Terminus (BRCT) domain HKK55_RS16480 PF01653 NAD-dependent DNA ligase adenylation domain HKK55_RS16480 PF03120 NAD-dependent DNA ligase OB-fold domain HKK55_RS16480 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HKK55_RS16480 PF12826 Helix-hairpin-helix motif HKK55_RS16485 PF04354 ZipA, C-terminal FtsZ-binding domain HKK55_RS16490 PF02463 RecF/RecN/SMC N terminal domain HKK55_RS16500 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS16500 PF01799 [2Fe-2S] binding domain HKK55_RS16505 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HKK55_RS16505 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HKK55_RS16515 PF01979 Amidohydrolase family HKK55_RS16520 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS16520 PF07729 FCD domain HKK55_RS16525 PF03594 Benzoate membrane transport protein HKK55_RS16530 PF04320 Protein with unknown function (DUF469) HKK55_RS16535 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HKK55_RS16540 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS16540 PF08448 PAS fold HKK55_RS16545 PF01170 Putative RNA methylase family UPF0020 HKK55_RS16545 PF02926 THUMP domain HKK55_RS16545 PF10672 S-adenosylmethionine-dependent methyltransferase HKK55_RS16550 PF04957 Ribosome modulation factor HKK55_RS16555 PF01180 Dihydroorotate dehydrogenase HKK55_RS16560 PF01464 Transglycosylase SLT domain HKK55_RS16565 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS16570 PF03958 Bacterial type II/III secretion system short domain HKK55_RS16570 PF00263 Bacterial type II and III secretion system protein HKK55_RS16575 PF00005 ABC transporter HKK55_RS16580 PF08376 Nitrate and nitrite sensing HKK55_RS16580 PF03861 ANTAR domain HKK55_RS16585 PF07690 Major Facilitator Superfamily HKK55_RS16590 PF00069 Protein kinase domain HKK55_RS16590 PF13191 AAA ATPase domain HKK55_RS16595 PF18267 Rubredoxin NAD+ reductase C-terminal domain HKK55_RS16595 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS16595 PF04324 BFD-like [2Fe-2S] binding domain HKK55_RS16595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HKK55_RS16595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HKK55_RS16600 PF00355 Rieske [2Fe-2S] domain HKK55_RS16605 PF01568 Molydopterin dinucleotide binding domain HKK55_RS16605 PF00384 Molybdopterin oxidoreductase HKK55_RS16605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HKK55_RS16605 PF04324 BFD-like [2Fe-2S] binding domain HKK55_RS16610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKK55_RS16615 PF05736 OprF membrane domain HKK55_RS16615 PF00691 OmpA family HKK55_RS16625 PF00924 Mechanosensitive ion channel HKK55_RS16625 PF05552 Conserved TM helix HKK55_RS16635 PF01544 CorA-like Mg2+ transporter protein HKK55_RS16640 PF03737 Aldolase/RraA HKK55_RS16650 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HKK55_RS16650 PF00391 PEP-utilising enzyme, mobile domain HKK55_RS16650 PF02896 PEP-utilising enzyme, TIM barrel domain HKK55_RS16655 PF03618 Kinase/pyrophosphorylase HKK55_RS16660 PF00155 Aminotransferase class I and II HKK55_RS16660 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS16665 PF00892 EamA-like transporter family HKK55_RS16670 PF00581 Rhodanese-like domain HKK55_RS16670 PF00899 ThiF family HKK55_RS16675 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS16680 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS16685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKK55_RS16685 PF01411 tRNA synthetases class II (A) HKK55_RS16685 PF02272 DHHA1 domain HKK55_RS16690 PF03972 MmgE/PrpD family HKK55_RS16695 PF04303 PrpF protein HKK55_RS16700 PF00694 Aconitase C-terminal domain HKK55_RS16700 PF00330 Aconitase family (aconitate hydratase) HKK55_RS16705 PF00285 Citrate synthase, C-terminal domain HKK55_RS16715 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS16715 PF07729 FCD domain HKK55_RS16720 PF08443 RimK-like ATP-grasp domain HKK55_RS16720 PF18030 RimK PreATP-grasp domain HKK55_RS16730 PF08443 RimK-like ATP-grasp domain HKK55_RS16730 PF18030 RimK PreATP-grasp domain HKK55_RS16735 PF04715 Anthranilate synthase component I, N terminal region HKK55_RS16735 PF00425 chorismate binding enzyme HKK55_RS16745 PF01507 Phosphoadenosine phosphosulfate reductase family HKK55_RS16750 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HKK55_RS16755 PF01177 Asp/Glu/Hydantoin racemase HKK55_RS16760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS16760 PF03466 LysR substrate binding domain HKK55_RS16770 PF13419 Haloacid dehalogenase-like hydrolase HKK55_RS16810 PF02779 Transketolase, pyrimidine binding domain HKK55_RS16810 PF02780 Transketolase, C-terminal domain HKK55_RS16810 PF00456 Transketolase, thiamine diphosphate binding domain HKK55_RS16815 PF00923 Transaldolase/Fructose-6-phosphate aldolase HKK55_RS16820 PF12833 Helix-turn-helix domain HKK55_RS16825 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS16825 PF00107 Zinc-binding dehydrogenase HKK55_RS16830 PF07690 Major Facilitator Superfamily HKK55_RS16850 PF00577 Outer membrane usher protein HKK55_RS16850 PF13954 PapC N-terminal domain HKK55_RS16850 PF13953 PapC C-terminal domain HKK55_RS16855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HKK55_RS16855 PF02753 Pili assembly chaperone PapD, C-terminal domain HKK55_RS16860 PF16970 Type-1 fimbrial protein, A HKK55_RS16865 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS16865 PF00072 Response regulator receiver domain HKK55_RS16865 PF00989 PAS fold HKK55_RS16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS16865 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS16865 PF01627 Hpt domain HKK55_RS16870 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS16870 PF00072 Response regulator receiver domain HKK55_RS16870 PF09456 RcsC Alpha-Beta-Loop (ABL) HKK55_RS16870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS16875 PF00072 Response regulator receiver domain HKK55_RS16875 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS16880 PF00072 Response regulator receiver domain HKK55_RS16880 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS16885 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS16885 PF01590 GAF domain HKK55_RS16885 PF00563 EAL domain HKK55_RS16885 PF00360 Phytochrome region HKK55_RS16895 PF00682 HMGL-like HKK55_RS16895 PF07836 DmpG-like communication domain HKK55_RS16900 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKK55_RS16900 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation HKK55_RS16910 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS16910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS16915 PF00005 ABC transporter HKK55_RS16915 PF00664 ABC transporter transmembrane region HKK55_RS16925 PF01523 Putative modulator of DNA gyrase HKK55_RS16930 PF03544 Gram-negative bacterial TonB protein C-terminal HKK55_RS16935 PF01618 MotA/TolQ/ExbB proton channel family HKK55_RS16940 PF02472 Biopolymer transport protein ExbD/TolR HKK55_RS16945 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS16945 PF00593 TonB dependent receptor HKK55_RS16950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS16955 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS16960 PF12911 N-terminal TM domain of oligopeptide transport permease C HKK55_RS16960 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS16965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKK55_RS16965 PF00005 ABC transporter HKK55_RS16970 PF00924 Mechanosensitive ion channel HKK55_RS16970 PF12795 Mechanosensitive ion channel porin domain HKK55_RS16970 PF12794 Mechanosensitive ion channel inner membrane domain 1 HKK55_RS16980 PF00108 Thiolase, N-terminal domain HKK55_RS16980 PF02803 Thiolase, C-terminal domain HKK55_RS16985 PF00106 short chain dehydrogenase HKK55_RS16990 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS16990 PF00501 AMP-binding enzyme HKK55_RS17010 PF02470 MlaD protein HKK55_RS17015 PF04403 Paraquat-inducible protein A HKK55_RS17020 PF04403 Paraquat-inducible protein A HKK55_RS17030 PF01011 PQQ enzyme repeat HKK55_RS17030 PF13360 PQQ-like domain HKK55_RS17100 PF07517 SecA DEAD-like domain HKK55_RS17100 PF02810 SEC-C motif HKK55_RS17100 PF07516 SecA Wing and Scaffold domain HKK55_RS17100 PF01043 SecA preprotein cross-linking domain HKK55_RS17125 PF02195 ParB-like nuclease domain HKK55_RS17165 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS17165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKK55_RS17165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKK55_RS17170 PF01553 Acyltransferase HKK55_RS17175 PF01544 CorA-like Mg2+ transporter protein HKK55_RS17180 PF02540 NAD synthase HKK55_RS17180 PF00117 Glutamine amidotransferase class-I HKK55_RS17180 PF00958 GMP synthase C terminal domain HKK55_RS17185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKK55_RS17185 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS17185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKK55_RS17190 PF02803 Thiolase, C-terminal domain HKK55_RS17190 PF00108 Thiolase, N-terminal domain HKK55_RS17200 PF01841 Transglutaminase-like superfamily HKK55_RS17200 PF08379 Bacterial transglutaminase-like N-terminal region HKK55_RS17205 PF14403 Circularly permuted ATP-grasp type 2 HKK55_RS17205 PF04168 A predicted alpha-helical domain with a conserved ER motif. HKK55_RS17210 PF14403 Circularly permuted ATP-grasp type 2 HKK55_RS17225 PF01852 START domain HKK55_RS17230 PF03692 Putative zinc- or iron-chelating domain HKK55_RS17240 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS17240 PF00155 Aminotransferase class I and II HKK55_RS17245 PF05736 OprF membrane domain HKK55_RS17245 PF00691 OmpA family HKK55_RS17260 PF01012 Electron transfer flavoprotein domain HKK55_RS17260 PF00766 Electron transfer flavoprotein FAD-binding domain HKK55_RS17265 PF01012 Electron transfer flavoprotein domain HKK55_RS17275 PF06719 AraC-type transcriptional regulator N-terminus HKK55_RS17275 PF12833 Helix-turn-helix domain HKK55_RS17280 PF00107 Zinc-binding dehydrogenase HKK55_RS17280 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS17285 PF09339 IclR helix-turn-helix domain HKK55_RS17285 PF01614 Bacterial transcriptional regulator HKK55_RS17290 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS17295 PF00005 ABC transporter HKK55_RS17300 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HKK55_RS17315 PF01966 HD domain HKK55_RS17335 PF08241 Methyltransferase domain HKK55_RS17340 PF00294 pfkB family carbohydrate kinase HKK55_RS17350 PF03747 ADP-ribosylglycohydrolase HKK55_RS17355 PF07702 UTRA domain HKK55_RS17355 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS17370 PF04055 Radical SAM superfamily HKK55_RS17370 PF06463 Molybdenum Cofactor Synthesis C HKK55_RS17375 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS17380 PF01026 TatD related DNase HKK55_RS17385 PF09115 DNA polymerase III, delta subunit, C terminal HKK55_RS17390 PF02223 Thymidylate kinase HKK55_RS17395 PF02618 YceG-like family HKK55_RS17400 PF01063 Amino-transferase class IV HKK55_RS17405 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK55_RS17405 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK55_RS17410 PF00550 Phosphopantetheine attachment site HKK55_RS17420 PF00698 Acyl transferase domain HKK55_RS17425 PF02504 Fatty acid synthesis protein HKK55_RS17430 PF01783 Ribosomal L32p protein family HKK55_RS17435 PF02620 Large ribosomal RNA subunit accumulation protein YceD HKK55_RS17440 PF02545 Maf-like protein HKK55_RS17445 PF01343 Peptidase family S49 HKK55_RS17445 PF06965 Na+/H+ antiporter 1 HKK55_RS17450 PF13419 Haloacid dehalogenase-like hydrolase HKK55_RS17455 PF01479 S4 domain HKK55_RS17455 PF00849 RNA pseudouridylate synthase HKK55_RS17460 PF00575 S1 RNA binding domain HKK55_RS17460 PF10150 Ribonuclease E/G family HKK55_RS17460 PF12111 Polyribonucleotide phosphorylase C terminal HKK55_RS17465 PF12804 MobA-like NTP transferase domain HKK55_RS17465 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS17470 PF13478 XdhC Rossmann domain HKK55_RS17470 PF02625 XdhC and CoxI family HKK55_RS17475 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HKK55_RS17480 PF01799 [2Fe-2S] binding domain HKK55_RS17480 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS17485 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HKK55_RS17485 PF01565 FAD binding domain HKK55_RS17490 PF01451 Low molecular weight phosphotyrosine protein phosphatase HKK55_RS17495 PF02348 Cytidylyltransferase HKK55_RS17500 PF03966 Trm112p-like protein HKK55_RS17505 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HKK55_RS17510 PF02472 Biopolymer transport protein ExbD/TolR HKK55_RS17515 PF01618 MotA/TolQ/ExbB proton channel family HKK55_RS17520 PF03772 Competence protein HKK55_RS17520 PF00753 Metallo-beta-lactamase superfamily HKK55_RS17530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS17530 PF16750 Sensor domain of 2-component histidine kinase HKK55_RS17530 PF00672 HAMP domain HKK55_RS17530 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS17535 PF00072 Response regulator receiver domain HKK55_RS17535 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS17540 PF00672 HAMP domain HKK55_RS17540 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS17540 PF01627 Hpt domain HKK55_RS17540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HKK55_RS17540 PF00072 Response regulator receiver domain HKK55_RS17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS17545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK55_RS17545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS17560 PF00085 Thioredoxin HKK55_RS17565 PF03960 ArsC family HKK55_RS17570 PF03358 NADPH-dependent FMN reductase HKK55_RS17585 PF01171 PP-loop family HKK55_RS17590 PF04893 Yip1 domain HKK55_RS17595 PF10263 SprT-like family HKK55_RS17595 PF17283 SprT-like zinc ribbon domain HKK55_RS17600 PF02515 CoA-transferase family III HKK55_RS17605 PF00375 Sodium:dicarboxylate symporter family HKK55_RS17610 PF12833 Helix-turn-helix domain HKK55_RS17610 PF02311 AraC-like ligand binding domain HKK55_RS17615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS17615 PF08918 PhoQ Sensor HKK55_RS17620 PF00072 Response regulator receiver domain HKK55_RS17620 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS17630 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HKK55_RS17630 PF01648 4'-phosphopantetheinyl transferase superfamily HKK55_RS17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS17635 PF00672 HAMP domain HKK55_RS17635 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS17640 PF00072 Response regulator receiver domain HKK55_RS17640 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS17645 PF02867 Ribonucleotide reductase, barrel domain HKK55_RS17645 PF03477 ATP cone domain HKK55_RS17645 PF00317 Ribonucleotide reductase, all-alpha domain HKK55_RS17655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HKK55_RS17655 PF00460 Flagella basal body rod protein HKK55_RS17655 PF07559 Flagellar basal body protein FlaE HKK55_RS17660 PF03963 Flagellar hook capping protein - N-terminal region HKK55_RS17660 PF13860 FlgD Ig-like domain HKK55_RS17660 PF13861 FlgD Tudor-like domain HKK55_RS17665 PF00460 Flagella basal body rod protein HKK55_RS17665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HKK55_RS17670 PF00460 Flagella basal body rod protein HKK55_RS17675 PF01739 CheR methyltransferase, SAM binding domain HKK55_RS17675 PF03705 CheR methyltransferase, all-alpha domain HKK55_RS17680 PF01584 CheW-like domain HKK55_RS17680 PF00072 Response regulator receiver domain HKK55_RS17700 PF07317 Flagellar regulator YcgR HKK55_RS17700 PF07238 PilZ domain HKK55_RS17705 PF07690 Major Facilitator Superfamily HKK55_RS17730 PF03869 Arc-like DNA binding domain HKK55_RS17735 PF00571 CBS domain HKK55_RS17735 PF01769 Divalent cation transporter HKK55_RS17735 PF03448 MgtE intracellular N domain HKK55_RS17755 PF02599 Global regulator protein family HKK55_RS17760 PF13840 ACT domain HKK55_RS17760 PF01842 ACT domain HKK55_RS17760 PF00696 Amino acid kinase family HKK55_RS17765 PF01411 tRNA synthetases class II (A) HKK55_RS17765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKK55_RS17765 PF02272 DHHA1 domain HKK55_RS17770 PF01212 Beta-eliminating lyase HKK55_RS17775 PF00885 6,7-dimethyl-8-ribityllumazine synthase HKK55_RS17780 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HKK55_RS17790 PF04996 Succinylarginine dihydrolase HKK55_RS17795 PF00171 Aldehyde dehydrogenase family HKK55_RS17800 PF04958 Arginine N-succinyltransferase beta subunit HKK55_RS17805 PF04958 Arginine N-succinyltransferase beta subunit HKK55_RS17810 PF00202 Aminotransferase class-III HKK55_RS17815 PF12833 Helix-turn-helix domain HKK55_RS17820 PF00005 ABC transporter HKK55_RS17830 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS17835 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS17840 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS17845 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS17845 PF00501 AMP-binding enzyme HKK55_RS17845 PF16177 Acetyl-coenzyme A synthetase N-terminus HKK55_RS17855 PF00268 Ribonucleotide reductase, small chain HKK55_RS17870 PF01850 PIN domain HKK55_RS17875 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HKK55_RS17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS17880 PF03466 LysR substrate binding domain HKK55_RS17885 PF14698 Argininosuccinate lyase C-terminal HKK55_RS17885 PF00206 Lyase HKK55_RS17890 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS17895 PF00005 ABC transporter HKK55_RS17900 PF01464 Transglycosylase SLT domain HKK55_RS17900 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS17905 PF07690 Major Facilitator Superfamily HKK55_RS17920 PF01965 DJ-1/PfpI family HKK55_RS17920 PF12833 Helix-turn-helix domain HKK55_RS17925 PF00106 short chain dehydrogenase HKK55_RS17930 PF01425 Amidase HKK55_RS17935 PF12706 Beta-lactamase superfamily domain HKK55_RS17945 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS17945 PF05230 MASE2 domain HKK55_RS17960 PF00117 Glutamine amidotransferase class-I HKK55_RS17960 PF06418 CTP synthase N-terminus HKK55_RS17970 PF03009 Glycerophosphoryl diester phosphodiesterase family HKK55_RS17985 PF01384 Phosphate transporter family HKK55_RS17990 PF02626 Carboxyltransferase domain, subdomain A and B HKK55_RS18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS18005 PF03466 LysR substrate binding domain HKK55_RS18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS18010 PF03466 LysR substrate binding domain HKK55_RS18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS18025 PF03466 LysR substrate binding domain HKK55_RS18035 PF03466 LysR substrate binding domain HKK55_RS18035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS18040 PF03466 LysR substrate binding domain HKK55_RS18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS18045 PF00106 short chain dehydrogenase HKK55_RS18050 PF04542 Sigma-70 region 2 HKK55_RS18050 PF08281 Sigma-70, region 4 HKK55_RS18060 PF03795 YCII-related domain HKK55_RS18080 PF00155 Aminotransferase class I and II HKK55_RS18085 PF02447 GntP family permease HKK55_RS18095 PF00356 Bacterial regulatory proteins, lacI family HKK55_RS18095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HKK55_RS18105 PF01370 NAD dependent epimerase/dehydratase family HKK55_RS18110 PF00083 Sugar (and other) transporter HKK55_RS18120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS18120 PF08447 PAS fold HKK55_RS18120 PF13426 PAS domain HKK55_RS18125 PF03466 LysR substrate binding domain HKK55_RS18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS18130 PF00043 Glutathione S-transferase, C-terminal domain HKK55_RS18130 PF02798 Glutathione S-transferase, N-terminal domain HKK55_RS18135 PF00221 Aromatic amino acid lyase HKK55_RS18140 PF02423 Ornithine cyclodeaminase/mu-crystallin family HKK55_RS18145 PF09084 NMT1/THI5 like HKK55_RS18155 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS18155 PF00593 TonB dependent receptor HKK55_RS18160 PF04773 FecR protein HKK55_RS18160 PF16220 Domain of unknown function (DUF4880) HKK55_RS18165 PF04542 Sigma-70 region 2 HKK55_RS18165 PF08281 Sigma-70, region 4 HKK55_RS18190 PF01327 Polypeptide deformylase HKK55_RS18195 PF03631 Virulence factor BrkB HKK55_RS18210 PF00501 AMP-binding enzyme HKK55_RS18210 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS18215 PF00501 AMP-binding enzyme HKK55_RS18215 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS18220 PF12146 Serine aminopeptidase, S33 HKK55_RS18225 PF01575 MaoC like domain HKK55_RS18235 PF12843 Putative quorum-sensing-regulated virulence factor HKK55_RS18240 PF00266 Aminotransferase class-V HKK55_RS18245 PF01081 KDPG and KHG aldolase HKK55_RS18250 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HKK55_RS18255 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HKK55_RS18255 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HKK55_RS18260 PF01418 Helix-turn-helix domain, rpiR family HKK55_RS18260 PF01380 SIS domain HKK55_RS18265 PF01263 Aldose 1-epimerase HKK55_RS18270 PF04966 Carbohydrate-selective porin, OprB family HKK55_RS18275 PF00005 ABC transporter HKK55_RS18275 PF17912 MalK OB fold domain HKK55_RS18280 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS18285 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS18290 PF01547 Bacterial extracellular solute-binding protein HKK55_RS18305 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family HKK55_RS18310 PF03466 LysR substrate binding domain HKK55_RS18310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS18320 PF01810 LysE type translocator HKK55_RS18325 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HKK55_RS18325 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HKK55_RS18330 PF00563 EAL domain HKK55_RS18330 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS18330 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS18340 PF02386 Cation transport protein HKK55_RS18345 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HKK55_RS18345 PF12833 Helix-turn-helix domain HKK55_RS18355 PF07690 Major Facilitator Superfamily HKK55_RS18370 PF07690 Major Facilitator Superfamily HKK55_RS18375 PF00472 RF-1 domain HKK55_RS18385 PF00324 Amino acid permease HKK55_RS18400 PF00849 RNA pseudouridylate synthase HKK55_RS18400 PF01479 S4 domain HKK55_RS18405 PF04079 Segregation and condensation complex subunit ScpB HKK55_RS18410 PF02616 Segregation and condensation protein ScpA HKK55_RS18415 PF01300 Telomere recombination HKK55_RS18425 PF04279 Intracellular septation protein A HKK55_RS18430 PF03795 YCII-related domain HKK55_RS18440 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS18440 PF00072 Response regulator receiver domain HKK55_RS18450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS18450 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS18450 PF08521 Two-component sensor kinase N-terminal HKK55_RS18455 PF02515 CoA-transferase family III HKK55_RS18460 PF06029 AlkA N-terminal domain HKK55_RS18460 PF00730 HhH-GPD superfamily base excision DNA repair protein HKK55_RS18465 PF13520 Amino acid permease HKK55_RS18470 PF13520 Amino acid permease HKK55_RS18480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKK55_RS18480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKK55_RS18485 PF00696 Amino acid kinase family HKK55_RS18495 PF00158 Sigma-54 interaction domain HKK55_RS18495 PF18024 Helix-turn-helix domain HKK55_RS18500 PF01597 Glycine cleavage H-protein HKK55_RS18505 PF02347 Glycine cleavage system P-protein HKK55_RS18510 PF03315 Serine dehydratase beta chain HKK55_RS18510 PF03313 Serine dehydratase alpha chain HKK55_RS18515 PF08669 Glycine cleavage T-protein C-terminal barrel domain HKK55_RS18515 PF01571 Aminomethyltransferase folate-binding domain HKK55_RS18520 PF00313 'Cold-shock' DNA-binding domain HKK55_RS18530 PF02445 Quinolinate synthetase A protein HKK55_RS18535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS18535 PF03466 LysR substrate binding domain HKK55_RS18540 PF01070 FMN-dependent dehydrogenase HKK55_RS18545 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HKK55_RS18545 PF17287 POTRA domain HKK55_RS18545 PF08479 POTRA domain, ShlB-type HKK55_RS18550 PF13332 Hemagglutinin repeat HKK55_RS18550 PF05860 haemagglutination activity domain HKK55_RS18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS18560 PF03466 LysR substrate binding domain HKK55_RS18570 PF06508 Queuosine biosynthesis protein QueC HKK55_RS18575 PF04055 Radical SAM superfamily HKK55_RS18580 PF13525 Outer membrane lipoprotein HKK55_RS18580 PF16331 TolA binding protein trimerisation HKK55_RS18585 PF00691 OmpA family HKK55_RS18590 PF04052 TolB amino-terminal domain HKK55_RS18590 PF07676 WD40-like Beta Propeller Repeat HKK55_RS18600 PF02472 Biopolymer transport protein ExbD/TolR HKK55_RS18605 PF01618 MotA/TolQ/ExbB proton channel family HKK55_RS18610 PF03061 Thioesterase superfamily HKK55_RS18615 PF05496 Holliday junction DNA helicase RuvB P-loop domain HKK55_RS18615 PF17864 RuvB AAA lid domain HKK55_RS18615 PF05491 RuvB C-terminal winged helix domain HKK55_RS18620 PF07499 RuvA, C-terminal domain HKK55_RS18620 PF01330 RuvA N terminal domain HKK55_RS18625 PF02075 Crossover junction endodeoxyribonuclease RuvC HKK55_RS18630 PF01709 Transcriptional regulator HKK55_RS18635 PF01336 OB-fold nucleic acid binding domain HKK55_RS18635 PF02938 GAD domain HKK55_RS18635 PF00152 tRNA synthetases class II (D, K and N) HKK55_RS18650 PF00210 Ferritin-like domain HKK55_RS18655 PF00313 'Cold-shock' DNA-binding domain HKK55_RS18660 PF04102 SlyX HKK55_RS18670 PF03573 outer membrane porin, OprD family HKK55_RS18675 PF05552 Conserved TM helix HKK55_RS18675 PF00924 Mechanosensitive ion channel HKK55_RS18680 PF04461 Protein of unknown function (DUF520) HKK55_RS18685 PF02558 Ketopantoate reductase PanE/ApbA HKK55_RS18685 PF08546 Ketopantoate reductase PanE/ApbA C terminal HKK55_RS18690 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS18690 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS18690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS18695 PF01923 Cobalamin adenosyltransferase HKK55_RS18700 PF00293 NUDIX domain HKK55_RS18705 PF01960 ArgJ family HKK55_RS18710 PF07516 SecA Wing and Scaffold domain HKK55_RS18710 PF02810 SEC-C motif HKK55_RS18710 PF07517 SecA DEAD-like domain HKK55_RS18710 PF01043 SecA preprotein cross-linking domain HKK55_RS18720 PF05872 Bacterial protein of unknown function (DUF853) HKK55_RS18725 PF00672 HAMP domain HKK55_RS18725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS18725 PF02743 Cache domain HKK55_RS18735 PF00551 Formyl transferase HKK55_RS18745 PF00929 Exonuclease HKK55_RS18745 PF08411 Exonuclease C-terminal HKK55_RS18770 PF07726 ATPase family associated with various cellular activities (AAA) HKK55_RS18770 PF17863 AAA lid domain HKK55_RS18790 PF00224 Pyruvate kinase, barrel domain HKK55_RS18790 PF02887 Pyruvate kinase, alpha/beta domain HKK55_RS18795 PF00378 Enoyl-CoA hydratase/isomerase HKK55_RS18800 PF00970 Oxidoreductase FAD-binding domain HKK55_RS18800 PF00111 2Fe-2S iron-sulfur cluster binding domain HKK55_RS18800 PF00175 Oxidoreductase NAD-binding domain HKK55_RS18805 PF05683 Fumarase C-terminus HKK55_RS18805 PF05681 Fumarate hydratase (Fumerase) HKK55_RS18810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS18810 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS18815 PF00072 Response regulator receiver domain HKK55_RS18815 PF02954 Bacterial regulatory protein, Fis family HKK55_RS18815 PF00158 Sigma-54 interaction domain HKK55_RS18820 PF00083 Sugar (and other) transporter HKK55_RS18845 PF06719 AraC-type transcriptional regulator N-terminus HKK55_RS18845 PF12833 Helix-turn-helix domain HKK55_RS18850 PF00672 HAMP domain HKK55_RS18850 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS18850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS18855 PF00072 Response regulator receiver domain HKK55_RS18855 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS18860 PF02685 Glucokinase HKK55_RS18865 PF00920 Dehydratase family HKK55_RS18870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HKK55_RS18870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HKK55_RS18875 PF08281 Sigma-70, region 4 HKK55_RS18875 PF04542 Sigma-70 region 2 HKK55_RS18880 PF04773 FecR protein HKK55_RS18880 PF16220 Domain of unknown function (DUF4880) HKK55_RS18885 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS18885 PF00593 TonB dependent receptor HKK55_RS18890 PF01126 Heme oxygenase HKK55_RS18895 PF04304 Protein of unknown function (DUF454) HKK55_RS18900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS18900 PF00672 HAMP domain HKK55_RS18925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS18930 PF00873 AcrB/AcrD/AcrF family HKK55_RS18950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS18950 PF00672 HAMP domain HKK55_RS18950 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS18955 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS18955 PF00072 Response regulator receiver domain HKK55_RS18960 PF00884 Sulfatase HKK55_RS18970 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS18970 PF00072 Response regulator receiver domain HKK55_RS18975 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS18975 PF16527 Two-component sensor protein CpxA, periplasmic domain HKK55_RS18975 PF00672 HAMP domain HKK55_RS18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS18980 PF01270 Glycosyl hydrolases family 8 HKK55_RS18985 PF00118 TCP-1/cpn60 chaperonin family HKK55_RS18990 PF00166 Chaperonin 10 Kd subunit HKK55_RS18995 PF04186 FxsA cytoplasmic membrane protein HKK55_RS19020 PF07690 Major Facilitator Superfamily HKK55_RS19025 PF04073 Aminoacyl-tRNA editing domain HKK55_RS19025 PF03129 Anticodon binding domain HKK55_RS19025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKK55_RS19035 PF11798 IMS family HHH motif HKK55_RS19035 PF00817 impB/mucB/samB family HKK55_RS19050 PF03706 Lysylphosphatidylglycerol synthase TM region HKK55_RS19050 PF09924 Uncharacterised conserved protein (DUF2156) HKK55_RS19060 PF02705 K+ potassium transporter HKK55_RS19065 PF04055 Radical SAM superfamily HKK55_RS19065 PF00919 Uncharacterized protein family UPF0004 HKK55_RS19065 PF18693 TRAM domain HKK55_RS19070 PF00117 Glutamine amidotransferase class-I HKK55_RS19070 PF03352 Methyladenine glycosylase HKK55_RS19070 PF00958 GMP synthase C terminal domain HKK55_RS19070 PF13302 Acetyltransferase (GNAT) domain HKK55_RS19070 PF13673 Acetyltransferase (GNAT) domain HKK55_RS19075 PF00849 RNA pseudouridylate synthase HKK55_RS19075 PF01479 S4 domain HKK55_RS19080 PF07308 Protein of unknown function (DUF1456) HKK55_RS19085 PF01980 tRNA-methyltransferase O HKK55_RS19085 PF18389 TrmO C-terminal domain HKK55_RS19090 PF00175 Oxidoreductase NAD-binding domain HKK55_RS19090 PF00970 Oxidoreductase FAD-binding domain HKK55_RS19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS19095 PF03466 LysR substrate binding domain HKK55_RS19100 PF01219 Prokaryotic diacylglycerol kinase HKK55_RS19105 PF00072 Response regulator receiver domain HKK55_RS19105 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS19125 PF02631 RecX family HKK55_RS19130 PF00154 recA bacterial DNA recombination protein HKK55_RS19135 PF02464 Competence-damaged protein HKK55_RS19140 PF00182 Chitinase class I HKK55_RS19230 PF00717 Peptidase S24-like HKK55_RS19230 PF01381 Helix-turn-helix HKK55_RS19235 PF01624 MutS domain I HKK55_RS19235 PF05188 MutS domain II HKK55_RS19235 PF05192 MutS domain III HKK55_RS19235 PF00488 MutS domain V HKK55_RS19235 PF05190 MutS family domain IV HKK55_RS19240 PF11953 Domain of unknown function (DUF3470) HKK55_RS19240 PF00037 4Fe-4S binding domain HKK55_RS19245 PF10609 NUBPL iron-transfer P-loop NTPase HKK55_RS19250 PF09334 tRNA synthetases class I (M) HKK55_RS19250 PF01588 Putative tRNA binding domain HKK55_RS19255 PF02508 Rnf-Nqr subunit, membrane protein HKK55_RS19260 PF04060 Putative Fe-S cluster HKK55_RS19265 PF03116 NQR2, RnfD, RnfE family HKK55_RS19270 PF04205 FMN-binding domain HKK55_RS19275 PF02508 Rnf-Nqr subunit, membrane protein HKK55_RS19280 PF00730 HhH-GPD superfamily base excision DNA repair protein HKK55_RS19280 PF00633 Helix-hairpin-helix motif HKK55_RS19280 PF10576 Iron-sulfur binding domain of endonuclease III HKK55_RS19290 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS19290 PF00072 Response regulator receiver domain HKK55_RS19295 PF00764 Arginosuccinate synthase HKK55_RS19305 PF01979 Amidohydrolase family HKK55_RS19310 PF00929 Exonuclease HKK55_RS19320 PF10417 C-terminal domain of 1-Cys peroxiredoxin HKK55_RS19320 PF00578 AhpC/TSA family HKK55_RS19325 PF04324 BFD-like [2Fe-2S] binding domain HKK55_RS19330 PF00210 Ferritin-like domain HKK55_RS19335 PF00462 Glutaredoxin HKK55_RS19340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HKK55_RS19340 PF00384 Molybdopterin oxidoreductase HKK55_RS19340 PF01568 Molydopterin dinucleotide binding domain HKK55_RS19345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKK55_RS19345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKK55_RS19350 PF00005 ABC transporter HKK55_RS19350 PF08402 TOBE domain HKK55_RS19355 PF04073 Aminoacyl-tRNA editing domain HKK55_RS19360 PF00230 Major intrinsic protein HKK55_RS19365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HKK55_RS19365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HKK55_RS19370 PF00455 DeoR C terminal sensor domain HKK55_RS19370 PF08220 DeoR-like helix-turn-helix domain HKK55_RS19375 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HKK55_RS19375 PF01266 FAD dependent oxidoreductase HKK55_RS19380 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS19385 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS19390 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS19395 PF00005 ABC transporter HKK55_RS19400 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS19400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS19405 PF02954 Bacterial regulatory protein, Fis family HKK55_RS19405 PF00158 Sigma-54 interaction domain HKK55_RS19405 PF00072 Response regulator receiver domain HKK55_RS19410 PF06942 GlpM protein HKK55_RS19415 PF00072 Response regulator receiver domain HKK55_RS19415 PF00158 Sigma-54 interaction domain HKK55_RS19415 PF02954 Bacterial regulatory protein, Fis family HKK55_RS19420 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS19420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS19435 PF00202 Aminotransferase class-III HKK55_RS19460 PF00892 EamA-like transporter family HKK55_RS19480 PF00561 alpha/beta hydrolase fold HKK55_RS19485 PF03466 LysR substrate binding domain HKK55_RS19485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS19495 PF01810 LysE type translocator HKK55_RS19500 PF00293 NUDIX domain HKK55_RS19510 PF00072 Response regulator receiver domain HKK55_RS19515 PF01197 Ribosomal protein L31 HKK55_RS19525 PF01645 Conserved region in glutamate synthase HKK55_RS19545 PF00324 Amino acid permease HKK55_RS19580 PF14496 C-terminal novel E3 ligase, LRR-interacting HKK55_RS19625 PF03551 Transcriptional regulator PadR-like family HKK55_RS19630 PF04954 Siderophore-interacting protein HKK55_RS19630 PF08021 Siderophore-interacting FAD-binding domain HKK55_RS19640 PF09905 DNA-binding protein VF530 HKK55_RS19645 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS19645 PF00593 TonB dependent receptor HKK55_RS19650 PF01011 PQQ enzyme repeat HKK55_RS19660 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS19660 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS19660 PF00563 EAL domain HKK55_RS19670 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKK55_RS19670 PF07683 Cobalamin synthesis protein cobW C-terminal domain HKK55_RS19690 PF07690 Major Facilitator Superfamily HKK55_RS19695 PF01522 Polysaccharide deacetylase HKK55_RS19700 PF01425 Amidase HKK55_RS19705 PF07729 FCD domain HKK55_RS19705 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS19710 PF00004 ATPase family associated with various cellular activities (AAA) HKK55_RS19710 PF05362 Lon protease (S16) C-terminal proteolytic domain HKK55_RS19710 PF02190 ATP-dependent protease La (LON) substrate-binding domain HKK55_RS19720 PF07947 YhhN family HKK55_RS19725 PF13649 Methyltransferase domain HKK55_RS19730 PF08003 Protein of unknown function (DUF1698) HKK55_RS19735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HKK55_RS19740 PF00394 Multicopper oxidase HKK55_RS19740 PF07731 Multicopper oxidase HKK55_RS19740 PF07732 Multicopper oxidase HKK55_RS19745 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HKK55_RS19750 PF02565 Recombination protein O C terminal HKK55_RS19750 PF11967 Recombination protein O N terminal HKK55_RS19755 PF01926 50S ribosome-binding GTPase HKK55_RS19755 PF07650 KH domain HKK55_RS19760 PF00035 Double-stranded RNA binding motif HKK55_RS19760 PF14622 Ribonuclease-III-like HKK55_RS19765 PF10502 Signal peptidase, peptidase S26 HKK55_RS19770 PF06421 GTP-binding protein LepA C-terminus HKK55_RS19770 PF00679 Elongation factor G C-terminus HKK55_RS19770 PF00009 Elongation factor Tu GTP binding domain HKK55_RS19770 PF03144 Elongation factor Tu domain 2 HKK55_RS19775 PF03739 Lipopolysaccharide export system permease LptF/LptG HKK55_RS19780 PF03739 Lipopolysaccharide export system permease LptF/LptG HKK55_RS19785 PF02789 Cytosol aminopeptidase family, N-terminal domain HKK55_RS19785 PF00883 Cytosol aminopeptidase family, catalytic domain HKK55_RS19790 PF04364 DNA polymerase III chi subunit, HolC HKK55_RS19800 PF10458 Valyl tRNA synthetase tRNA binding arm HKK55_RS19800 PF00133 tRNA synthetases class I (I, L, M and V) HKK55_RS19800 PF08264 Anticodon-binding domain of tRNA HKK55_RS19805 PF05971 RNA methyltransferase HKK55_RS19810 PF00216 Bacterial DNA-binding protein HKK55_RS19815 PF04245 37-kD nucleoid-associated bacterial protein HKK55_RS19830 PF01541 GIY-YIG catalytic domain HKK55_RS19840 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS19840 PF00072 Response regulator receiver domain HKK55_RS19845 PF00072 Response regulator receiver domain HKK55_RS19845 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS19845 PF09456 RcsC Alpha-Beta-Loop (ABL) HKK55_RS19845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS19860 PF06551 Protein of unknown function (DUF1120) HKK55_RS19875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HKK55_RS19880 PF13954 PapC N-terminal domain HKK55_RS19880 PF00577 Outer membrane usher protein HKK55_RS19880 PF13953 PapC C-terminal domain HKK55_RS19885 PF06551 Protein of unknown function (DUF1120) HKK55_RS19890 PF06551 Protein of unknown function (DUF1120) HKK55_RS19895 PF07690 Major Facilitator Superfamily HKK55_RS19900 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS19900 PF07729 FCD domain HKK55_RS19910 PF00005 ABC transporter HKK55_RS19915 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS19920 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS19925 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS19930 PF02230 Phospholipase/Carboxylesterase HKK55_RS19935 PF00270 DEAD/DEAH box helicase HKK55_RS19935 PF00271 Helicase conserved C-terminal domain HKK55_RS19940 PF01266 FAD dependent oxidoreductase HKK55_RS19945 PF02391 MoaE protein HKK55_RS19950 PF02597 ThiS family HKK55_RS19955 PF01967 MoaC family HKK55_RS19960 PF12951 Passenger-associated-transport-repeat HKK55_RS19960 PF00082 Subtilase family HKK55_RS19960 PF03797 Autotransporter beta-domain HKK55_RS19965 PF02562 PhoH-like protein HKK55_RS19965 PF13638 PIN domain HKK55_RS19970 PF03422 Carbohydrate binding module (family 6) HKK55_RS19970 PF00457 Glycosyl hydrolases family 11 HKK55_RS19970 PF01522 Polysaccharide deacetylase HKK55_RS19980 PF03883 Peroxide stress protein YaaA HKK55_RS19985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HKK55_RS19985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HKK55_RS19985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HKK55_RS19995 PF07238 PilZ domain HKK55_RS20000 PF08238 Sel1 repeat HKK55_RS20005 PF13372 Alginate export HKK55_RS20010 PF05048 Periplasmic copper-binding protein (NosD) HKK55_RS20015 PF16824 C-terminal carbohydrate-binding module HKK55_RS20015 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX HKK55_RS20020 PF05426 Alginate lyase HKK55_RS20025 PF03062 MBOAT, membrane-bound O-acyltransferase family HKK55_RS20030 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX HKK55_RS20035 PF11182 Alginate O-acetyl transferase AlgF HKK55_RS20040 PF01050 Mannose-6-phosphate isomerase HKK55_RS20040 PF00483 Nucleotidyl transferase HKK55_RS20050 PF00106 short chain dehydrogenase HKK55_RS20055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS20055 PF03466 LysR substrate binding domain HKK55_RS20060 PF07690 Major Facilitator Superfamily HKK55_RS20070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS20070 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS20080 PF04632 Fusaric acid resistance protein family HKK55_RS20085 PF02321 Outer membrane efflux protein HKK55_RS20095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS20095 PF03466 LysR substrate binding domain HKK55_RS20100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK55_RS20100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS20105 PF13188 PAS domain HKK55_RS20105 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS20105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS20105 PF00072 Response regulator receiver domain HKK55_RS20105 PF08448 PAS fold HKK55_RS20120 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS20130 PF13533 Biotin-lipoyl like HKK55_RS20135 PF00873 AcrB/AcrD/AcrF family HKK55_RS20140 PF00072 Response regulator receiver domain HKK55_RS20140 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS20145 PF00672 HAMP domain HKK55_RS20145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS20145 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS20150 PF03573 outer membrane porin, OprD family HKK55_RS20155 PF00563 EAL domain HKK55_RS20155 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS20155 PF00360 Phytochrome region HKK55_RS20155 PF01590 GAF domain HKK55_RS20160 PF01590 GAF domain HKK55_RS20160 PF00360 Phytochrome region HKK55_RS20160 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS20160 PF00563 EAL domain HKK55_RS20165 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HKK55_RS20170 PF00091 Tubulin/FtsZ family, GTPase domain HKK55_RS20170 PF12327 FtsZ family, C-terminal domain HKK55_RS20175 PF02491 SHS2 domain inserted in FTSA HKK55_RS20180 PF03799 Cell division protein FtsQ HKK55_RS20180 PF08478 POTRA domain, FtsQ-type HKK55_RS20185 PF01820 D-ala D-ala ligase N-terminus HKK55_RS20185 PF07478 D-ala D-ala ligase C-terminus HKK55_RS20190 PF08245 Mur ligase middle domain HKK55_RS20190 PF02875 Mur ligase family, glutamate ligase domain HKK55_RS20190 PF01225 Mur ligase family, catalytic domain HKK55_RS20195 PF04101 Glycosyltransferase family 28 C-terminal domain HKK55_RS20195 PF03033 Glycosyltransferase family 28 N-terminal domain HKK55_RS20200 PF01098 Cell cycle protein HKK55_RS20205 PF02875 Mur ligase family, glutamate ligase domain HKK55_RS20205 PF08245 Mur ligase middle domain HKK55_RS20210 PF00953 Glycosyl transferase family 4 HKK55_RS20210 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HKK55_RS20215 PF08245 Mur ligase middle domain HKK55_RS20215 PF02875 Mur ligase family, glutamate ligase domain HKK55_RS20215 PF01225 Mur ligase family, catalytic domain HKK55_RS20220 PF02875 Mur ligase family, glutamate ligase domain HKK55_RS20220 PF08245 Mur ligase middle domain HKK55_RS20220 PF01225 Mur ligase family, catalytic domain HKK55_RS20225 PF00905 Penicillin binding protein transpeptidase domain HKK55_RS20225 PF03717 Penicillin-binding Protein dimerisation domain HKK55_RS20230 PF04999 Cell division protein FtsL HKK55_RS20235 PF01795 MraW methylase family HKK55_RS20240 PF02381 MraZ protein, putative antitoxin-like HKK55_RS20250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKK55_RS20255 PF04348 LppC putative lipoprotein HKK55_RS20260 PF02021 Uncharacterised protein family UPF0102 HKK55_RS20265 PF13580 SIS domain HKK55_RS20270 PF04972 BON domain HKK55_RS20275 PF00691 OmpA family HKK55_RS20280 PF00753 Metallo-beta-lactamase superfamily HKK55_RS20285 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS20285 PF17874 MalT-like TPR region HKK55_RS20290 PF07044 Protein of unknown function (DUF1329) HKK55_RS20300 PF00501 AMP-binding enzyme HKK55_RS20300 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS20305 PF01810 LysE type translocator HKK55_RS20310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK55_RS20310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS20315 PF08468 Methyltransferase small domain N-terminal HKK55_RS20315 PF05175 Methyltransferase small domain HKK55_RS20320 PF01169 Uncharacterized protein family UPF0016 HKK55_RS20325 PF01435 Peptidase family M48 HKK55_RS20330 PF02586 SOS response associated peptidase (SRAP) HKK55_RS20370 PF06039 Malate:quinone oxidoreductase (Mqo) HKK55_RS20400 PF00860 Permease family HKK55_RS20405 PF00155 Aminotransferase class I and II HKK55_RS20410 PF00815 Histidinol dehydrogenase HKK55_RS20415 PF01634 ATP phosphoribosyltransferase HKK55_RS20420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKK55_RS20435 PF05494 MlaC protein HKK55_RS20440 PF02470 MlaD protein HKK55_RS20445 PF02405 Permease MlaE HKK55_RS20450 PF00005 ABC transporter HKK55_RS20455 PF00571 CBS domain HKK55_RS20455 PF01380 SIS domain HKK55_RS20470 PF03968 OstA-like protein HKK55_RS20475 PF00005 ABC transporter HKK55_RS20475 PF12399 Branched-chain amino acid ATP-binding cassette transporter HKK55_RS20480 PF00309 Sigma-54 factor, Activator interacting domain (AID) HKK55_RS20480 PF04963 Sigma-54 factor, core binding domain HKK55_RS20480 PF04552 Sigma-54, DNA binding domain HKK55_RS20485 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HKK55_RS20490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HKK55_RS20495 PF03668 P-loop ATPase protein family HKK55_RS20500 PF00381 PTS HPr component phosphorylation site HKK55_RS20505 PF02535 ZIP Zinc transporter HKK55_RS20510 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HKK55_RS20510 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HKK55_RS20520 PF10415 Fumarase C C-terminus HKK55_RS20520 PF00206 Lyase HKK55_RS20530 PF01523 Putative modulator of DNA gyrase HKK55_RS20535 PF04751 Protein of unknown function (DUF615) HKK55_RS20540 PF01523 Putative modulator of DNA gyrase HKK55_RS20545 PF00795 Carbon-nitrogen hydrolase HKK55_RS20555 PF00575 S1 RNA binding domain HKK55_RS20555 PF10150 Ribonuclease E/G family HKK55_RS20560 PF02545 Maf-like protein HKK55_RS20570 PF04085 rod shape-determining protein MreC HKK55_RS20580 PF02686 Glu-tRNAGln amidotransferase C subunit HKK55_RS20585 PF01425 Amidase HKK55_RS20590 PF02637 GatB domain HKK55_RS20590 PF02934 GatB/GatE catalytic domain HKK55_RS20595 PF03330 Lytic transglycolase HKK55_RS20600 PF01699 Sodium/calcium exchanger protein HKK55_RS20605 PF02627 Carboxymuconolactone decarboxylase family HKK55_RS20615 PF08666 SAF domain HKK55_RS20615 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HKK55_RS20620 PF07690 Major Facilitator Superfamily HKK55_RS20625 PF00171 Aldehyde dehydrogenase family HKK55_RS20630 PF00701 Dihydrodipicolinate synthetase family HKK55_RS20640 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS20640 PF07729 FCD domain HKK55_RS20645 PF04386 Stringent starvation protein B HKK55_RS20650 PF02798 Glutathione S-transferase, N-terminal domain HKK55_RS20650 PF00043 Glutathione S-transferase, C-terminal domain HKK55_RS20655 PF02167 Cytochrome C1 family HKK55_RS20660 PF00033 Cytochrome b/b6/petB HKK55_RS20660 PF00032 Cytochrome b(C-terminal)/b6/petD HKK55_RS20665 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HKK55_RS20665 PF00355 Rieske [2Fe-2S] domain HKK55_RS20670 PF00380 Ribosomal protein S9/S16 HKK55_RS20675 PF00572 Ribosomal protein L13 HKK55_RS20680 PF00248 Aldo/keto reductase family HKK55_RS20685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS20685 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS20685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS20695 PF03969 AFG1-like ATPase HKK55_RS20700 PF00579 tRNA synthetases class I (W and Y) HKK55_RS20715 PF06472 ABC transporter transmembrane region 2 HKK55_RS20715 PF00005 ABC transporter HKK55_RS20720 PF02954 Bacterial regulatory protein, Fis family HKK55_RS20720 PF00072 Response regulator receiver domain HKK55_RS20725 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS20725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS20740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS20745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS20750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS20755 PF03573 outer membrane porin, OprD family HKK55_RS20760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS20765 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS20770 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS20770 PF12911 N-terminal TM domain of oligopeptide transport permease C HKK55_RS20775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKK55_RS20775 PF00005 ABC transporter HKK55_RS20780 PF00005 ABC transporter HKK55_RS20780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HKK55_RS20795 PF16658 Class II release factor RF3, C-terminal domain HKK55_RS20795 PF03144 Elongation factor Tu domain 2 HKK55_RS20795 PF00009 Elongation factor Tu GTP binding domain HKK55_RS20800 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS20805 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HKK55_RS20810 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS20815 PF00571 CBS domain HKK55_RS20815 PF00005 ABC transporter HKK55_RS20820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HKK55_RS20820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HKK55_RS20830 PF13640 2OG-Fe(II) oxygenase superfamily HKK55_RS20830 PF18331 PKHD-type hydroxylase C-terminal domain HKK55_RS20835 PF00593 TonB dependent receptor HKK55_RS20835 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS20840 PF00667 FAD binding domain HKK55_RS20840 PF00258 Flavodoxin HKK55_RS20840 PF00175 Oxidoreductase NAD-binding domain HKK55_RS20845 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS20845 PF00593 TonB dependent receptor HKK55_RS20850 PF16220 Domain of unknown function (DUF4880) HKK55_RS20850 PF04773 FecR protein HKK55_RS20860 PF09423 PhoD-like phosphatase HKK55_RS20860 PF16655 PhoD-like phosphatase, N-terminal domain HKK55_RS20865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HKK55_RS20865 PF02378 Phosphotransferase system, EIIC HKK55_RS20870 PF00294 pfkB family carbohydrate kinase HKK55_RS20875 PF05524 PEP-utilising enzyme, N-terminal HKK55_RS20875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HKK55_RS20875 PF00381 PTS HPr component phosphorylation site HKK55_RS20875 PF02896 PEP-utilising enzyme, TIM barrel domain HKK55_RS20875 PF00391 PEP-utilising enzyme, mobile domain HKK55_RS20880 PF00356 Bacterial regulatory proteins, lacI family HKK55_RS20880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HKK55_RS20885 PF01026 TatD related DNase HKK55_RS20895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS20895 PF00672 HAMP domain HKK55_RS20905 PF01510 N-acetylmuramoyl-L-alanine amidase HKK55_RS20915 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HKK55_RS20915 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HKK55_RS20935 PF00114 Pilin (bacterial filament) HKK55_RS20935 PF07963 Prokaryotic N-terminal methylation motif HKK55_RS20940 PF00482 Type II secretion system (T2SS), protein F HKK55_RS20945 PF06750 Bacterial Peptidase A24 N-terminal domain HKK55_RS20945 PF01478 Type IV leader peptidase family HKK55_RS20950 PF01121 Dephospho-CoA kinase HKK55_RS20955 PF03884 DNA gyrase inhibitor YacG HKK55_RS20975 PF01053 Cys/Met metabolism PLP-dependent enzyme HKK55_RS20990 PF00501 AMP-binding enzyme HKK55_RS20990 PF00550 Phosphopantetheine attachment site HKK55_RS20990 PF00668 Condensation domain HKK55_RS20990 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS21005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS21005 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS21005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS21010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS21010 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS21010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS21020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HKK55_RS21020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HKK55_RS21025 PF00975 Thioesterase domain HKK55_RS21025 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS21025 PF00550 Phosphopantetheine attachment site HKK55_RS21025 PF00668 Condensation domain HKK55_RS21025 PF00501 AMP-binding enzyme HKK55_RS21035 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS21045 PF00171 Aldehyde dehydrogenase family HKK55_RS21060 PF00501 AMP-binding enzyme HKK55_RS21060 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS21060 PF00550 Phosphopantetheine attachment site HKK55_RS21060 PF00668 Condensation domain HKK55_RS21075 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS21100 PF02861 Clp amino terminal domain, pathogenicity island component HKK55_RS21100 PF10431 C-terminal, D2-small domain, of ClpB protein HKK55_RS21100 PF07724 AAA domain (Cdc48 subfamily) HKK55_RS21100 PF00004 ATPase family associated with various cellular activities (AAA) HKK55_RS21100 PF17871 AAA lid domain HKK55_RS21110 PF00849 RNA pseudouridylate synthase HKK55_RS21110 PF01479 S4 domain HKK55_RS21115 PF13525 Outer membrane lipoprotein HKK55_RS21125 PF01266 FAD dependent oxidoreductase HKK55_RS21130 PF07963 Prokaryotic N-terminal methylation motif HKK55_RS21130 PF00114 Pilin (bacterial filament) HKK55_RS21155 PF02401 LytB protein HKK55_RS21160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK55_RS21165 PF01252 Signal peptidase (SPase) II HKK55_RS21170 PF08264 Anticodon-binding domain of tRNA HKK55_RS21170 PF00133 tRNA synthetases class I (I, L, M and V) HKK55_RS21170 PF06827 Zinc finger found in FPG and IleRS HKK55_RS21175 PF01687 Riboflavin kinase HKK55_RS21175 PF06574 FAD synthetase HKK55_RS21180 PF03023 Lipid II flippase MurJ HKK55_RS21185 PF01649 Ribosomal protein S20 HKK55_RS21190 PF05981 CreA protein HKK55_RS21195 PF00696 Amino acid kinase family HKK55_RS21195 PF01472 PUA domain HKK55_RS21200 PF01018 GTP1/OBG HKK55_RS21200 PF01926 50S ribosome-binding GTPase HKK55_RS21205 PF01016 Ribosomal L27 protein HKK55_RS21210 PF00829 Ribosomal prokaryotic L21 protein HKK55_RS21215 PF00348 Polyprenyl synthetase HKK55_RS21220 PF03831 PhnA domain HKK55_RS21220 PF08274 PhnA Zinc-Ribbon HKK55_RS21225 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS21225 PF12804 MobA-like NTP transferase domain HKK55_RS21230 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKK55_RS21230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK55_RS21235 PF03350 Uncharacterized protein family, UPF0114 HKK55_RS21250 PF05362 Lon protease (S16) C-terminal proteolytic domain HKK55_RS21250 PF13654 AAA domain HKK55_RS21275 PF03449 Transcription elongation factor, N-terminal HKK55_RS21275 PF01272 Transcription elongation factor, GreA/GreB, C-term HKK55_RS21280 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HKK55_RS21280 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HKK55_RS21285 PF00005 ABC transporter HKK55_RS21285 PF12848 ABC transporter HKK55_RS21290 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS21290 PF00563 EAL domain HKK55_RS21290 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS21295 PF00464 Serine hydroxymethyltransferase HKK55_RS21300 PF07683 Cobalamin synthesis protein cobW C-terminal domain HKK55_RS21300 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKK55_RS21305 PF04328 Selenoprotein, putative HKK55_RS21310 PF13722 5TM C-terminal transporter carbon starvation CstA HKK55_RS21310 PF02554 Carbon starvation protein CstA HKK55_RS21315 PF07238 PilZ domain HKK55_RS21320 PF18073 Rubredoxin metal binding domain HKK55_RS21330 PF06628 Catalase-related immune-responsive HKK55_RS21330 PF00199 Catalase HKK55_RS21335 PF01741 Large-conductance mechanosensitive channel, MscL HKK55_RS21340 PF00970 Oxidoreductase FAD-binding domain HKK55_RS21340 PF00175 Oxidoreductase NAD-binding domain HKK55_RS21345 PF03472 Autoinducer binding domain HKK55_RS21345 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS21350 PF05175 Methyltransferase small domain HKK55_RS21360 PF02322 Cytochrome bd terminal oxidase subunit II HKK55_RS21365 PF01654 Cytochrome bd terminal oxidase subunit I HKK55_RS21380 PF00860 Permease family HKK55_RS21385 PF05958 tRNA (Uracil-5-)-methyltransferase HKK55_RS21390 PF06438 Heme-binding protein A (HasA) HKK55_RS21410 PF01220 Dehydroquinase class II HKK55_RS21415 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HKK55_RS21415 PF08501 Shikimate dehydrogenase substrate binding domain HKK55_RS21420 PF17938 Tetracyclin repressor-like, C-terminal domain HKK55_RS21420 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS21430 PF07690 Major Facilitator Superfamily HKK55_RS21445 PF04228 Putative neutral zinc metallopeptidase HKK55_RS21465 PF13302 Acetyltransferase (GNAT) domain HKK55_RS21470 PF00850 Histone deacetylase domain HKK55_RS21480 PF00271 Helicase conserved C-terminal domain HKK55_RS21480 PF00270 DEAD/DEAH box helicase HKK55_RS21485 PF00892 EamA-like transporter family HKK55_RS21490 PF13404 AsnC-type helix-turn-helix domain HKK55_RS21490 PF01037 Lrp/AsnC ligand binding domain HKK55_RS21515 PF00929 Exonuclease HKK55_RS21515 PF04851 Type III restriction enzyme, res subunit HKK55_RS21515 PF13307 Helicase C-terminal domain HKK55_RS21525 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) HKK55_RS21540 PF00270 DEAD/DEAH box helicase HKK55_RS21540 PF08482 ATP-dependent helicase C-terminal HKK55_RS21540 PF00271 Helicase conserved C-terminal domain HKK55_RS21540 PF04408 Helicase associated domain (HA2) HKK55_RS21550 PF16916 Dimerisation domain of Zinc Transporter HKK55_RS21550 PF01545 Cation efflux family HKK55_RS21560 PF01037 Lrp/AsnC ligand binding domain HKK55_RS21570 PF00849 RNA pseudouridylate synthase HKK55_RS21575 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus HKK55_RS21575 PF01048 Phosphorylase superfamily HKK55_RS21580 PF18158 Adaptive response protein AidB N-terminal domain HKK55_RS21580 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS21580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS21585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS21585 PF01627 Hpt domain HKK55_RS21585 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS21585 PF00672 HAMP domain HKK55_RS21585 PF00072 Response regulator receiver domain HKK55_RS21585 PF17149 Periplasmic sensor domain found in signal transduction proteins HKK55_RS21590 PF08543 Phosphomethylpyrimidine kinase HKK55_RS21595 PF02581 Thiamine monophosphate synthase HKK55_RS21600 PF00202 Aminotransferase class-III HKK55_RS21615 PF01938 TRAM domain HKK55_RS21615 PF00919 Uncharacterized protein family UPF0004 HKK55_RS21615 PF04055 Radical SAM superfamily HKK55_RS21620 PF02562 PhoH-like protein HKK55_RS21625 PF02130 Uncharacterized protein family UPF0054 HKK55_RS21630 PF03471 Transporter associated domain HKK55_RS21630 PF00571 CBS domain HKK55_RS21635 PF00795 Carbon-nitrogen hydrolase HKK55_RS21650 PF13603 Leucyl-tRNA synthetase, Domain 2 HKK55_RS21650 PF00133 tRNA synthetases class I (I, L, M and V) HKK55_RS21650 PF08264 Anticodon-binding domain of tRNA HKK55_RS21650 PF09334 tRNA synthetases class I (M) HKK55_RS21670 PF13406 Transglycosylase SLT domain HKK55_RS21675 PF17676 LD-carboxypeptidase C-terminal domain HKK55_RS21675 PF02016 LD-carboxypeptidase N-terminal domain HKK55_RS21680 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HKK55_RS21680 PF04055 Radical SAM superfamily HKK55_RS21685 PF03099 Biotin/lipoate A/B protein ligase family HKK55_RS21690 PF04359 Protein of unknown function (DUF493) HKK55_RS21695 PF00768 D-alanyl-D-alanine carboxypeptidase HKK55_RS21695 PF07943 Penicillin-binding protein 5, C-terminal domain HKK55_RS21700 PF05036 Sporulation related domain HKK55_RS21700 PF03330 Lytic transglycolase HKK55_RS21705 PF13406 Transglycosylase SLT domain HKK55_RS21710 PF01098 Cell cycle protein HKK55_RS21715 PF00905 Penicillin binding protein transpeptidase domain HKK55_RS21715 PF03717 Penicillin-binding Protein dimerisation domain HKK55_RS21720 PF02590 Predicted SPOUT methyltransferase HKK55_RS21730 PF01467 Cytidylyltransferase-like HKK55_RS21735 PF00171 Aldehyde dehydrogenase family HKK55_RS21740 PF02245 Methylpurine-DNA glycosylase (MPG) HKK55_RS21745 PF09335 SNARE associated Golgi protein HKK55_RS21760 PF04172 LrgB-like family HKK55_RS21765 PF03788 LrgA family HKK55_RS21770 PF01575 MaoC like domain HKK55_RS21780 PF13460 NAD(P)H-binding HKK55_RS21790 PF02441 Flavoprotein HKK55_RS21795 PF08245 Mur ligase middle domain HKK55_RS21795 PF01225 Mur ligase family, catalytic domain HKK55_RS21795 PF02875 Mur ligase family, glutamate ligase domain HKK55_RS21800 PF00158 Sigma-54 interaction domain HKK55_RS21800 PF02954 Bacterial regulatory protein, Fis family HKK55_RS21800 PF01590 GAF domain HKK55_RS21805 PF00171 Aldehyde dehydrogenase family HKK55_RS21810 PF13520 Amino acid permease HKK55_RS21815 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HKK55_RS21820 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HKK55_RS21825 PF00583 Acetyltransferase (GNAT) family HKK55_RS21830 PF09335 SNARE associated Golgi protein HKK55_RS21835 PF06167 Glucose-regulated metallo-peptidase M90 HKK55_RS21840 PF00719 Inorganic pyrophosphatase HKK55_RS21845 PF01381 Helix-turn-helix HKK55_RS21845 PF00717 Peptidase S24-like HKK55_RS21875 PF13006 Insertion element 4 transposase N-terminal HKK55_RS21875 PF01609 Transposase DDE domain HKK55_RS21930 PF00577 Outer membrane usher protein HKK55_RS21930 PF13954 PapC N-terminal domain HKK55_RS21930 PF13953 PapC C-terminal domain HKK55_RS21935 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HKK55_RS21935 PF02753 Pili assembly chaperone PapD, C-terminal domain HKK55_RS21940 PF00419 Fimbrial protein HKK55_RS21965 PF02525 Flavodoxin-like fold HKK55_RS21970 PF03466 LysR substrate binding domain HKK55_RS21970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS21975 PF00563 EAL domain HKK55_RS21975 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS21975 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS21980 PF00072 Response regulator receiver domain HKK55_RS21980 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS21985 PF01627 Hpt domain HKK55_RS21985 PF00989 PAS fold HKK55_RS21985 PF00072 Response regulator receiver domain HKK55_RS21985 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS21985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS21985 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS21995 PF00577 Outer membrane usher protein HKK55_RS21995 PF13954 PapC N-terminal domain HKK55_RS21995 PF13953 PapC C-terminal domain HKK55_RS22000 PF02753 Pili assembly chaperone PapD, C-terminal domain HKK55_RS22000 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HKK55_RS22010 PF00563 EAL domain HKK55_RS22010 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS22010 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS22010 PF13188 PAS domain HKK55_RS22025 PF05598 Transposase domain (DUF772) HKK55_RS22025 PF01609 Transposase DDE domain HKK55_RS22030 PF13018 Extended Signal Peptide of Type V secretion system HKK55_RS22030 PF05658 Head domain of trimeric autotransporter adhesin HKK55_RS22030 PF05662 Coiled stalk of trimeric autotransporter adhesin HKK55_RS22030 PF03895 YadA-like membrane anchor domain HKK55_RS22035 PF01609 Transposase DDE domain HKK55_RS22035 PF05598 Transposase domain (DUF772) HKK55_RS22040 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS22040 PF00072 Response regulator receiver domain HKK55_RS22045 PF00072 Response regulator receiver domain HKK55_RS22045 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS22045 PF00989 PAS fold HKK55_RS22045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS22045 PF01627 Hpt domain HKK55_RS22045 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS22055 PF02525 Flavodoxin-like fold HKK55_RS22060 PF13411 MerR HTH family regulatory protein HKK55_RS22060 PF07739 TipAS antibiotic-recognition domain HKK55_RS22065 PF02609 Exonuclease VII small subunit HKK55_RS22070 PF00348 Polyprenyl synthetase HKK55_RS22075 PF02779 Transketolase, pyrimidine binding domain HKK55_RS22075 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HKK55_RS22075 PF02780 Transketolase, C-terminal domain HKK55_RS22080 PF00593 TonB dependent receptor HKK55_RS22080 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS22085 PF01497 Periplasmic binding protein HKK55_RS22095 PF00925 GTP cyclohydrolase II HKK55_RS22105 PF02769 AIR synthase related protein, C-terminal domain HKK55_RS22105 PF00586 AIR synthase related protein, N-terminal domain HKK55_RS22110 PF01029 NusB family HKK55_RS22115 PF00885 6,7-dimethyl-8-ribityllumazine synthase HKK55_RS22120 PF00925 GTP cyclohydrolase II HKK55_RS22120 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HKK55_RS22125 PF00677 Lumazine binding domain HKK55_RS22130 PF01872 RibD C-terminal domain HKK55_RS22130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HKK55_RS22135 PF03477 ATP cone domain HKK55_RS22150 PF00085 Thioredoxin HKK55_RS22165 PF00005 ABC transporter HKK55_RS22190 PF00271 Helicase conserved C-terminal domain HKK55_RS22190 PF00270 DEAD/DEAH box helicase HKK55_RS22190 PF08494 DEAD/H associated HKK55_RS22195 PF07690 Major Facilitator Superfamily HKK55_RS22210 PF00072 Response regulator receiver domain HKK55_RS22210 PF12833 Helix-turn-helix domain HKK55_RS22215 PF00857 Isochorismatase family HKK55_RS22225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS22225 PF03466 LysR substrate binding domain HKK55_RS22230 PF00561 alpha/beta hydrolase fold HKK55_RS22235 PF00436 Single-strand binding protein family HKK55_RS22240 PF07690 Major Facilitator Superfamily HKK55_RS22245 PF17755 UvrA DNA-binding domain HKK55_RS22245 PF17760 UvrA interaction domain HKK55_RS22250 PF00210 Ferritin-like domain HKK55_RS22255 PF00199 Catalase HKK55_RS22255 PF06628 Catalase-related immune-responsive HKK55_RS22260 PF01196 Ribosomal protein L17 HKK55_RS22265 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HKK55_RS22265 PF01000 RNA polymerase Rpb3/RpoA insert domain HKK55_RS22265 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HKK55_RS22270 PF00163 Ribosomal protein S4/S9 N-terminal domain HKK55_RS22270 PF01479 S4 domain HKK55_RS22275 PF00411 Ribosomal protein S11 HKK55_RS22280 PF00416 Ribosomal protein S13/S18 HKK55_RS22285 PF00444 Ribosomal protein L36 HKK55_RS22290 PF00344 SecY translocase HKK55_RS22295 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HKK55_RS22300 PF00327 Ribosomal protein L30p/L7e HKK55_RS22305 PF03719 Ribosomal protein S5, C-terminal domain HKK55_RS22305 PF00333 Ribosomal protein S5, N-terminal domain HKK55_RS22310 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HKK55_RS22315 PF00347 Ribosomal protein L6 HKK55_RS22320 PF00410 Ribosomal protein S8 HKK55_RS22325 PF00253 Ribosomal protein S14p/S29e HKK55_RS22330 PF00673 ribosomal L5P family C-terminus HKK55_RS22330 PF00281 Ribosomal protein L5 HKK55_RS22335 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HKK55_RS22335 PF00467 KOW motif HKK55_RS22340 PF00238 Ribosomal protein L14p/L23e HKK55_RS22345 PF00366 Ribosomal protein S17 HKK55_RS22350 PF00831 Ribosomal L29 protein HKK55_RS22355 PF00252 Ribosomal protein L16p/L10e HKK55_RS22360 PF07650 KH domain HKK55_RS22360 PF00189 Ribosomal protein S3, C-terminal domain HKK55_RS22365 PF00237 Ribosomal protein L22p/L17e HKK55_RS22370 PF00203 Ribosomal protein S19 HKK55_RS22375 PF00181 Ribosomal Proteins L2, RNA binding domain HKK55_RS22375 PF03947 Ribosomal Proteins L2, C-terminal domain HKK55_RS22380 PF00276 Ribosomal protein L23 HKK55_RS22385 PF00573 Ribosomal protein L4/L1 family HKK55_RS22390 PF00297 Ribosomal protein L3 HKK55_RS22395 PF00338 Ribosomal protein S10p/S20e HKK55_RS22400 PF00009 Elongation factor Tu GTP binding domain HKK55_RS22400 PF03143 Elongation factor Tu C-terminal domain HKK55_RS22400 PF03144 Elongation factor Tu domain 2 HKK55_RS22405 PF00679 Elongation factor G C-terminus HKK55_RS22405 PF03144 Elongation factor Tu domain 2 HKK55_RS22405 PF00009 Elongation factor Tu GTP binding domain HKK55_RS22405 PF14492 Elongation Factor G, domain II HKK55_RS22405 PF03764 Elongation factor G, domain IV HKK55_RS22410 PF00177 Ribosomal protein S7p/S5e HKK55_RS22415 PF00164 Ribosomal protein S12/S23 HKK55_RS22420 PF00623 RNA polymerase Rpb1, domain 2 HKK55_RS22420 PF04997 RNA polymerase Rpb1, domain 1 HKK55_RS22420 PF04983 RNA polymerase Rpb1, domain 3 HKK55_RS22420 PF05000 RNA polymerase Rpb1, domain 4 HKK55_RS22420 PF04998 RNA polymerase Rpb1, domain 5 HKK55_RS22425 PF04560 RNA polymerase Rpb2, domain 7 HKK55_RS22425 PF04561 RNA polymerase Rpb2, domain 2 HKK55_RS22425 PF04565 RNA polymerase Rpb2, domain 3 HKK55_RS22425 PF10385 RNA polymerase beta subunit external 1 domain HKK55_RS22425 PF00562 RNA polymerase Rpb2, domain 6 HKK55_RS22425 PF04563 RNA polymerase beta subunit HKK55_RS22430 PF16320 Ribosomal protein L7/L12 dimerisation domain HKK55_RS22430 PF00542 Ribosomal protein L7/L12 C-terminal domain HKK55_RS22435 PF00466 Ribosomal protein L10 HKK55_RS22440 PF00687 Ribosomal protein L1p/L10e family HKK55_RS22445 PF00298 Ribosomal protein L11, RNA binding domain HKK55_RS22445 PF03946 Ribosomal protein L11, N-terminal domain HKK55_RS22450 PF00467 KOW motif HKK55_RS22450 PF02357 Transcription termination factor nusG HKK55_RS22455 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HKK55_RS22485 PF03309 Type III pantothenate kinase HKK55_RS22490 PF08279 HTH domain HKK55_RS22490 PF02237 Biotin protein ligase C terminal domain HKK55_RS22490 PF03099 Biotin/lipoate A/B protein ligase family HKK55_RS22520 PF00579 tRNA synthetases class I (W and Y) HKK55_RS22520 PF01479 S4 domain HKK55_RS22525 PF01551 Peptidase family M23 HKK55_RS22525 PF04225 Opacity-associated protein A LysM-like domain HKK55_RS22530 PF03702 Anhydro-N-acetylmuramic acid kinase HKK55_RS22535 PF01521 Iron-sulphur cluster biosynthesis HKK55_RS22540 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKK55_RS22540 PF02774 Semialdehyde dehydrogenase, dimerisation domain HKK55_RS22560 PF00106 short chain dehydrogenase HKK55_RS22565 PF01230 HIT domain HKK55_RS22570 PF03232 Ubiquinone biosynthesis protein COQ7 HKK55_RS22575 PF02566 OsmC-like protein HKK55_RS22580 PF13545 Crp-like helix-turn-helix domain HKK55_RS22580 PF00027 Cyclic nucleotide-binding domain HKK55_RS22590 PF00218 Indole-3-glycerol phosphate synthase HKK55_RS22595 PF02885 Glycosyl transferase family, helical bundle domain HKK55_RS22595 PF00591 Glycosyl transferase family, a/b domain HKK55_RS22600 PF00117 Glutamine amidotransferase class-I HKK55_RS22605 PF03797 Autotransporter beta-domain HKK55_RS22605 PF00657 GDSL-like Lipase/Acylhydrolase HKK55_RS22610 PF00425 chorismate binding enzyme HKK55_RS22610 PF04715 Anthranilate synthase component I, N terminal region HKK55_RS22615 PF13419 Haloacid dehalogenase-like hydrolase HKK55_RS22620 PF00834 Ribulose-phosphate 3 epimerase family HKK55_RS22625 PF00465 Iron-containing alcohol dehydrogenase HKK55_RS22630 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS22635 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS22645 PF00005 ABC transporter HKK55_RS22645 PF08402 TOBE domain HKK55_RS22650 PF00072 Response regulator receiver domain HKK55_RS22650 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS22655 PF05384 Sensor protein DegS HKK55_RS22655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS22655 PF07730 Histidine kinase HKK55_RS22665 PF05099 Tellurite resistance protein TerB HKK55_RS22665 PF00226 DnaJ domain HKK55_RS22670 PF00483 Nucleotidyl transferase HKK55_RS22675 PF01636 Phosphotransferase enzyme family HKK55_RS22680 PF04453 LPS transport system D HKK55_RS22680 PF03968 OstA-like protein HKK55_RS22685 PF09312 SurA N-terminal domain HKK55_RS22685 PF00639 PPIC-type PPIASE domain HKK55_RS22690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HKK55_RS22695 PF00398 Ribosomal RNA adenine dimethylase HKK55_RS22700 PF04379 ApaG domain HKK55_RS22705 PF00149 Calcineurin-like phosphoesterase HKK55_RS22710 PF00581 Rhodanese-like domain HKK55_RS22715 PF08298 PrkA AAA domain HKK55_RS22715 PF06798 PrkA serine protein kinase C-terminal domain HKK55_RS22720 PF04285 Protein of unknown function (DUF444) HKK55_RS22725 PF04293 SpoVR like protein HKK55_RS22730 PF12627 Probable RNA and SrmB- binding site of polymerase A HKK55_RS22730 PF01743 Poly A polymerase head domain HKK55_RS22730 PF01966 HD domain HKK55_RS22740 PF02152 Dihydroneopterin aldolase HKK55_RS22745 PF02660 Glycerol-3-phosphate acyltransferase HKK55_RS22750 PF00814 Glycoprotease family HKK55_RS22755 PF01165 Ribosomal protein S21 HKK55_RS22760 PF10410 DnaB-helicase binding domain of primase HKK55_RS22760 PF08278 DNA primase DnaG DnaB-binding HKK55_RS22760 PF13662 Toprim domain HKK55_RS22760 PF08275 DNA primase catalytic core, N-terminal domain HKK55_RS22760 PF01807 CHC2 zinc finger HKK55_RS22765 PF04542 Sigma-70 region 2 HKK55_RS22765 PF04539 Sigma-70 region 3 HKK55_RS22765 PF04545 Sigma-70, region 4 HKK55_RS22765 PF04546 Sigma-70, non-essential region HKK55_RS22765 PF03979 Sigma-70 factor, region 1.1 HKK55_RS22765 PF00140 Sigma-70 factor, region 1.2 HKK55_RS22770 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS22770 PF00563 EAL domain HKK55_RS22770 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS22795 PF03109 ABC1 family HKK55_RS22800 PF01425 Amidase HKK55_RS22810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS22810 PF03466 LysR substrate binding domain HKK55_RS22825 PF01011 PQQ enzyme repeat HKK55_RS22830 PF13407 Periplasmic binding protein domain HKK55_RS22840 PF01593 Flavin containing amine oxidoreductase HKK55_RS22845 PF00795 Carbon-nitrogen hydrolase HKK55_RS22850 PF00675 Insulinase (Peptidase family M16) HKK55_RS22850 PF05193 Peptidase M16 inactive domain HKK55_RS22855 PF08042 PqqA family HKK55_RS22860 PF12706 Beta-lactamase superfamily domain HKK55_RS22865 PF03070 TENA/THI-4/PQQC family HKK55_RS22870 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HKK55_RS22875 PF04055 Radical SAM superfamily HKK55_RS22875 PF13186 Iron-sulfur cluster-binding domain HKK55_RS22880 PF01679 Proteolipid membrane potential modulator HKK55_RS22895 PF00202 Aminotransferase class-III HKK55_RS22900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS22900 PF03466 LysR substrate binding domain HKK55_RS22905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS22905 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS22905 PF12806 Acetyl-CoA dehydrogenase C-terminal like HKK55_RS22905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS22910 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS22910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS22910 PF12806 Acetyl-CoA dehydrogenase C-terminal like HKK55_RS22910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS22915 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS22920 PF01548 Transposase HKK55_RS22920 PF02371 Transposase IS116/IS110/IS902 family HKK55_RS22925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS22925 PF12806 Acetyl-CoA dehydrogenase C-terminal like HKK55_RS22925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS22925 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS22940 PF08241 Methyltransferase domain HKK55_RS22945 PF08241 Methyltransferase domain HKK55_RS22945 PF12697 Alpha/beta hydrolase family HKK55_RS22950 PF00155 Aminotransferase class I and II HKK55_RS22955 PF06968 Biotin and Thiamin Synthesis associated domain HKK55_RS22955 PF04055 Radical SAM superfamily HKK55_RS22960 PF00156 Phosphoribosyl transferase domain HKK55_RS22965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS22965 PF03459 TOBE domain HKK55_RS22975 PF01636 Phosphotransferase enzyme family HKK55_RS22980 PF00892 EamA-like transporter family HKK55_RS22985 PF01909 Nucleotidyltransferase domain HKK55_RS22985 PF01966 HD domain HKK55_RS22985 PF08335 GlnD PII-uridylyltransferase HKK55_RS22985 PF01842 ACT domain HKK55_RS22990 PF01274 Malate synthase HKK55_RS23000 PF00158 Sigma-54 interaction domain HKK55_RS23000 PF00072 Response regulator receiver domain HKK55_RS23010 PF07733 Bacterial DNA polymerase III alpha NTPase domain HKK55_RS23010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HKK55_RS23010 PF02811 PHP domain HKK55_RS23010 PF14579 Helix-hairpin-helix motif HKK55_RS23010 PF00929 Exonuclease HKK55_RS23010 PF11490 DNA polymerase III polC-type N-terminus II HKK55_RS23015 PF08281 Sigma-70, region 4 HKK55_RS23015 PF04542 Sigma-70 region 2 HKK55_RS23025 PF00593 TonB dependent receptor HKK55_RS23025 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS23045 PF06123 Inner membrane protein CreD HKK55_RS23050 PF00672 HAMP domain HKK55_RS23050 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS23050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS23055 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS23055 PF00072 Response regulator receiver domain HKK55_RS23060 PF18030 RimK PreATP-grasp domain HKK55_RS23060 PF08443 RimK-like ATP-grasp domain HKK55_RS23065 PF01553 Acyltransferase HKK55_RS23080 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS23080 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HKK55_RS23085 PF00551 Formyl transferase HKK55_RS23095 PF17806 Sarcosine oxidase A3 domain HKK55_RS23095 PF08669 Glycine cleavage T-protein C-terminal barrel domain HKK55_RS23095 PF01571 Aminomethyltransferase folate-binding domain HKK55_RS23095 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS23100 PF04267 Sarcosine oxidase, delta subunit family HKK55_RS23105 PF01266 FAD dependent oxidoreductase HKK55_RS23110 PF00464 Serine hydroxymethyltransferase HKK55_RS23120 PF01212 Beta-eliminating lyase HKK55_RS23130 PF00042 Globin HKK55_RS23130 PF00970 Oxidoreductase FAD-binding domain HKK55_RS23130 PF00175 Oxidoreductase NAD-binding domain HKK55_RS23135 PF00355 Rieske [2Fe-2S] domain HKK55_RS23135 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HKK55_RS23150 PF01012 Electron transfer flavoprotein domain HKK55_RS23150 PF00766 Electron transfer flavoprotein FAD-binding domain HKK55_RS23155 PF13183 4Fe-4S dicluster domain HKK55_RS23155 PF02754 Cysteine-rich domain HKK55_RS23160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HKK55_RS23180 PF07690 Major Facilitator Superfamily HKK55_RS23200 PF12833 Helix-turn-helix domain HKK55_RS23200 PF01965 DJ-1/PfpI family HKK55_RS23210 PF05853 beta-keto acid cleavage enzyme HKK55_RS23215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HKK55_RS23215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HKK55_RS23225 PF06155 Protein of unknown function (DUF971) HKK55_RS23225 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HKK55_RS23235 PF12833 Helix-turn-helix domain HKK55_RS23235 PF01965 DJ-1/PfpI family HKK55_RS23240 PF03315 Serine dehydratase beta chain HKK55_RS23240 PF03313 Serine dehydratase alpha chain HKK55_RS23245 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HKK55_RS23250 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS23255 PF00571 CBS domain HKK55_RS23255 PF00005 ABC transporter HKK55_RS23260 PF02028 BCCT, betaine/carnitine/choline family transporter HKK55_RS23265 PF13977 BetI-type transcriptional repressor, C-terminal HKK55_RS23265 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS23270 PF00171 Aldehyde dehydrogenase family HKK55_RS23275 PF00732 GMC oxidoreductase HKK55_RS23275 PF05199 GMC oxidoreductase HKK55_RS23280 PF03737 Aldolase/RraA HKK55_RS23295 PF00561 alpha/beta hydrolase fold HKK55_RS23300 PF07690 Major Facilitator Superfamily HKK55_RS23305 PF03880 DbpA RNA binding domain HKK55_RS23305 PF00270 DEAD/DEAH box helicase HKK55_RS23305 PF00271 Helicase conserved C-terminal domain HKK55_RS23315 PF12805 FUSC-like inner membrane protein yccS HKK55_RS23325 PF13673 Acetyltransferase (GNAT) domain HKK55_RS23335 PF01863 Protein of unknown function DUF45 HKK55_RS23340 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS23340 PF00563 EAL domain HKK55_RS23340 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS23350 PF00842 Alanine racemase, C-terminal domain HKK55_RS23350 PF01168 Alanine racemase, N-terminal domain HKK55_RS23355 PF01116 Fructose-bisphosphate aldolase class-II HKK55_RS23370 PF00162 Phosphoglycerate kinase HKK55_RS23375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HKK55_RS23375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HKK55_RS23380 PF02779 Transketolase, pyrimidine binding domain HKK55_RS23380 PF02780 Transketolase, C-terminal domain HKK55_RS23380 PF00456 Transketolase, thiamine diphosphate binding domain HKK55_RS23390 PF02773 S-adenosylmethionine synthetase, C-terminal domain HKK55_RS23390 PF02772 S-adenosylmethionine synthetase, central domain HKK55_RS23390 PF00438 S-adenosylmethionine synthetase, N-terminal domain HKK55_RS23400 PF01653 NAD-dependent DNA ligase adenylation domain HKK55_RS23400 PF03120 NAD-dependent DNA ligase OB-fold domain HKK55_RS23435 PF00535 Glycosyl transferase family 2 HKK55_RS23455 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HKK55_RS23455 PF05221 S-adenosyl-L-homocysteine hydrolase HKK55_RS23460 PF02219 Methylenetetrahydrofolate reductase HKK55_RS23470 PF00270 DEAD/DEAH box helicase HKK55_RS23470 PF00271 Helicase conserved C-terminal domain HKK55_RS23475 PF04264 YceI-like domain HKK55_RS23480 PF01292 Prokaryotic cytochrome b561 HKK55_RS23485 PF00202 Aminotransferase class-III HKK55_RS23490 PF04452 RNA methyltransferase HKK55_RS23495 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS23505 PF01266 FAD dependent oxidoreductase HKK55_RS23510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS23510 PF03466 LysR substrate binding domain HKK55_RS23515 PF03006 Haemolysin-III related HKK55_RS23530 PF03466 LysR substrate binding domain HKK55_RS23530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS23545 PF00698 Acyl transferase domain HKK55_RS23550 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG HKK55_RS23560 PF01039 Carboxyl transferase domain HKK55_RS23565 PF06857 Malonate decarboxylase delta subunit (MdcD) HKK55_RS23570 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HKK55_RS23575 PF16957 Malonate decarboxylase, alpha subunit, transporter HKK55_RS23595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS23595 PF01584 CheW-like domain HKK55_RS23595 PF00072 Response regulator receiver domain HKK55_RS23595 PF01627 Hpt domain HKK55_RS23595 PF02895 Signal transducing histidine kinase, homodimeric domain HKK55_RS23600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS23600 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HKK55_RS23605 PF01584 CheW-like domain HKK55_RS23610 PF00072 Response regulator receiver domain HKK55_RS23615 PF00072 Response regulator receiver domain HKK55_RS23620 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HKK55_RS23620 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HKK55_RS23630 PF02622 Uncharacterized ACR, COG1678 HKK55_RS23635 PF03652 Holliday junction resolvase HKK55_RS23640 PF00156 Phosphoribosyl transferase domain HKK55_RS23645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKK55_RS23645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKK55_RS23650 PF01979 Amidohydrolase family HKK55_RS23660 PF00877 NlpC/P60 family HKK55_RS23665 PF00437 Type II/IV secretion system protein HKK55_RS23670 PF01168 Alanine racemase, N-terminal domain HKK55_RS23675 PF03807 NADP oxidoreductase coenzyme F420-dependent HKK55_RS23675 PF14748 Pyrroline-5-carboxylate reductase dimerisation HKK55_RS23680 PF02325 YGGT family HKK55_RS23685 PF02594 Uncharacterised ACR, YggU family COG1872 HKK55_RS23690 PF00561 alpha/beta hydrolase fold HKK55_RS23695 PF00561 alpha/beta hydrolase fold HKK55_RS23695 PF07021 Methionine biosynthesis protein MetW HKK55_RS23705 PF01725 Ham1 family HKK55_RS23710 PF06969 HemN C-terminal domain HKK55_RS23710 PF04055 Radical SAM superfamily HKK55_RS23720 PF02390 Putative methyltransferase HKK55_RS23725 PF05690 Thiazole biosynthesis protein ThiG HKK55_RS23730 PF05690 Thiazole biosynthesis protein ThiG HKK55_RS23730 PF02597 ThiS family HKK55_RS23735 PF04241 Protein of unknown function (DUF423) HKK55_RS23740 PF00912 Transglycosylase HKK55_RS23745 PF04542 Sigma-70 region 2 HKK55_RS23745 PF00140 Sigma-70 factor, region 1.2 HKK55_RS23745 PF04545 Sigma-70, region 4 HKK55_RS23750 PF18075 FtsX extracellular domain HKK55_RS23755 PF00005 ABC transporter HKK55_RS23760 PF00448 SRP54-type protein, GTPase domain HKK55_RS23760 PF02881 SRP54-type protein, helical bundle domain HKK55_RS23765 PF05193 Peptidase M16 inactive domain HKK55_RS23765 PF00675 Insulinase (Peptidase family M16) HKK55_RS23770 PF05193 Peptidase M16 inactive domain HKK55_RS23780 PF00561 alpha/beta hydrolase fold HKK55_RS23785 PF00581 Rhodanese-like domain HKK55_RS23790 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS23795 PF00171 Aldehyde dehydrogenase family HKK55_RS23805 PF00732 GMC oxidoreductase HKK55_RS23805 PF05199 GMC oxidoreductase HKK55_RS23810 PF01467 Cytidylyltransferase-like HKK55_RS23815 PF00037 4Fe-4S binding domain HKK55_RS23820 PF06827 Zinc finger found in FPG and IleRS HKK55_RS23820 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HKK55_RS23820 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HKK55_RS23830 PF17785 PUA-like domain HKK55_RS23830 PF10672 S-adenosylmethionine-dependent methyltransferase HKK55_RS23835 PF07690 Major Facilitator Superfamily HKK55_RS23840 PF00920 Dehydratase family HKK55_RS23855 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HKK55_RS23860 PF04221 RelB antitoxin HKK55_RS23865 PF00186 Dihydrofolate reductase HKK55_RS23875 PF01926 50S ribosome-binding GTPase HKK55_RS23875 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HKK55_RS23880 PF01966 HD domain HKK55_RS23885 PF01266 FAD dependent oxidoreductase HKK55_RS23895 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS23900 PF08402 TOBE domain HKK55_RS23900 PF00005 ABC transporter HKK55_RS23905 PF03466 LysR substrate binding domain HKK55_RS23905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS23915 PF13411 MerR HTH family regulatory protein HKK55_RS23920 PF00303 Thymidylate synthase HKK55_RS23925 PF01790 Prolipoprotein diacylglyceryl transferase HKK55_RS23930 PF01925 Sulfite exporter TauE/SafE HKK55_RS23940 PF05524 PEP-utilising enzyme, N-terminal HKK55_RS23940 PF00391 PEP-utilising enzyme, mobile domain HKK55_RS23940 PF02896 PEP-utilising enzyme, TIM barrel domain HKK55_RS23940 PF01590 GAF domain HKK55_RS23945 PF00293 NUDIX domain HKK55_RS23960 PF00585 C-terminal regulatory domain of Threonine dehydratase HKK55_RS23960 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS23965 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HKK55_RS23970 PF04389 Peptidase family M28 HKK55_RS23975 PF06977 SdiA-regulated HKK55_RS23980 PF06977 SdiA-regulated HKK55_RS23985 PF01557 Fumarylacetoacetate (FAA) hydrolase family HKK55_RS23990 PF01565 FAD binding domain HKK55_RS23990 PF02913 FAD linked oxidases, C-terminal domain HKK55_RS23995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKK55_RS23995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKK55_RS23995 PF01842 ACT domain HKK55_RS24005 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS24010 PF04463 Protein of unknown function (DUF523) HKK55_RS24035 PF01804 Penicillin amidase HKK55_RS24040 PF01965 DJ-1/PfpI family HKK55_RS24040 PF12833 Helix-turn-helix domain HKK55_RS24050 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS24055 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS24060 PF00005 ABC transporter HKK55_RS24060 PF08402 TOBE domain HKK55_RS24065 PF13416 Bacterial extracellular solute-binding protein HKK55_RS24070 PF13416 Bacterial extracellular solute-binding protein HKK55_RS24075 PF00202 Aminotransferase class-III HKK55_RS24080 PF00120 Glutamine synthetase, catalytic domain HKK55_RS24085 PF07722 Peptidase C26 HKK55_RS24090 PF00120 Glutamine synthetase, catalytic domain HKK55_RS24100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS24100 PF03459 TOBE domain HKK55_RS24105 PF00005 ABC transporter HKK55_RS24110 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS24115 PF00296 Luciferase-like monooxygenase HKK55_RS24120 PF09084 NMT1/THI5 like HKK55_RS24125 PF03358 NADPH-dependent FMN reductase HKK55_RS24130 PF00578 AhpC/TSA family HKK55_RS24130 PF10417 C-terminal domain of 1-Cys peroxiredoxin HKK55_RS24135 PF03573 outer membrane porin, OprD family HKK55_RS24140 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HKK55_RS24145 PF00696 Amino acid kinase family HKK55_RS24145 PF00583 Acetyltransferase (GNAT) family HKK55_RS24150 PF07687 Peptidase dimerisation domain HKK55_RS24150 PF01546 Peptidase family M20/M25/M40 HKK55_RS24160 PF13404 AsnC-type helix-turn-helix domain HKK55_RS24160 PF01037 Lrp/AsnC ligand binding domain HKK55_RS24170 PF00437 Type II/IV secretion system protein HKK55_RS24180 PF01145 SPFH domain / Band 7 family HKK55_RS24180 PF16200 C-terminal region of band_7 HKK55_RS24195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HKK55_RS24200 PF01597 Glycine cleavage H-protein HKK55_RS24205 PF01571 Aminomethyltransferase folate-binding domain HKK55_RS24205 PF08669 Glycine cleavage T-protein C-terminal barrel domain HKK55_RS24210 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS24220 PF01494 FAD binding domain HKK55_RS24225 PF01494 FAD binding domain HKK55_RS24230 PF05195 Aminopeptidase P, N-terminal domain HKK55_RS24230 PF00557 Metallopeptidase family M24 HKK55_RS24235 PF03695 Uncharacterised protein family (UPF0149) HKK55_RS24245 PF05164 Cell division protein ZapA HKK55_RS24255 PF01812 5-formyltetrahydrofolate cyclo-ligase family HKK55_RS24275 PF08990 Erythronolide synthase docking HKK55_RS24275 PF16197 Ketoacyl-synthetase C-terminal extension HKK55_RS24275 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK55_RS24275 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS24275 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK55_RS24275 PF08659 KR domain HKK55_RS24275 PF00698 Acyl transferase domain HKK55_RS24275 PF14765 Polyketide synthase dehydratase HKK55_RS24275 PF00550 Phosphopantetheine attachment site HKK55_RS24280 PF07690 Major Facilitator Superfamily HKK55_RS24290 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS24290 PF00593 TonB dependent receptor HKK55_RS24300 PF00175 Oxidoreductase NAD-binding domain HKK55_RS24305 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HKK55_RS24310 PF01757 Acyltransferase family HKK55_RS24315 PF07497 Rho termination factor, RNA-binding domain HKK55_RS24315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKK55_RS24315 PF07498 Rho termination factor, N-terminal domain HKK55_RS24320 PF00085 Thioredoxin HKK55_RS24325 PF07729 FCD domain HKK55_RS24325 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS24330 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS24335 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS24345 PF00005 ABC transporter HKK55_RS24355 PF13954 PapC N-terminal domain HKK55_RS24355 PF00577 Outer membrane usher protein HKK55_RS24355 PF13953 PapC C-terminal domain HKK55_RS24360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HKK55_RS24370 PF02541 Ppx/GppA phosphatase family HKK55_RS24375 PF02503 Polyphosphate kinase middle domain HKK55_RS24375 PF13090 Polyphosphate kinase C-terminal domain 2 HKK55_RS24375 PF13089 Polyphosphate kinase N-terminal domain HKK55_RS24375 PF17941 Polyphosphate kinase C-terminal domain 1 HKK55_RS24380 PF00490 Delta-aminolevulinic acid dehydratase HKK55_RS24385 PF09335 SNARE associated Golgi protein HKK55_RS24390 PF04116 Fatty acid hydroxylase superfamily HKK55_RS24400 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HKK55_RS24405 PF03239 Iron permease FTR1 family HKK55_RS24410 PF01810 LysE type translocator HKK55_RS24420 PF00005 ABC transporter HKK55_RS24420 PF12848 ABC transporter HKK55_RS24435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKK55_RS24435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKK55_RS24440 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HKK55_RS24445 PF02600 Disulfide bond formation protein DsbB HKK55_RS24460 PF03900 Porphobilinogen deaminase, C-terminal domain HKK55_RS24460 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HKK55_RS24465 PF00072 Response regulator receiver domain HKK55_RS24465 PF04397 LytTr DNA-binding domain HKK55_RS24470 PF00206 Lyase HKK55_RS24470 PF14698 Argininosuccinate lyase C-terminal HKK55_RS24475 PF13417 Glutathione S-transferase, N-terminal domain HKK55_RS24475 PF14497 Glutathione S-transferase, C-terminal domain HKK55_RS24490 PF01295 Adenylate cyclase, class-I HKK55_RS24490 PF12633 Adenylate cyclase NT domain HKK55_RS24495 PF01272 Transcription elongation factor, GreA/GreB, C-term HKK55_RS24495 PF14760 Rnk N-terminus HKK55_RS24505 PF01491 Frataxin-like domain HKK55_RS24510 PF13627 Prokaryotic lipoprotein-attachment site HKK55_RS24515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HKK55_RS24515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HKK55_RS24520 PF01678 Diaminopimelate epimerase HKK55_RS24530 PF00589 Phage integrase family HKK55_RS24530 PF02899 Phage integrase, N-terminal SAM-like domain HKK55_RS24535 PF13419 Haloacid dehalogenase-like hydrolase HKK55_RS24545 PF01894 Uncharacterised protein family UPF0047 HKK55_RS24550 PF00909 Ammonium Transporter Family HKK55_RS24555 PF00543 Nitrogen regulatory protein P-II HKK55_RS24560 PF04380 Membrane fusogenic activity HKK55_RS24570 PF01078 Magnesium chelatase, subunit ChlI HKK55_RS24570 PF13335 Magnesium chelatase, subunit ChlI C-terminal HKK55_RS24585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS24585 PF00672 HAMP domain HKK55_RS24590 PF03466 LysR substrate binding domain HKK55_RS24590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS24595 PF01554 MatE HKK55_RS24600 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS24600 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS24600 PF00563 EAL domain HKK55_RS24605 PF00580 UvrD/REP helicase N-terminal domain HKK55_RS24605 PF13361 UvrD-like helicase C-terminal domain HKK55_RS24615 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HKK55_RS24615 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HKK55_RS24620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS24630 PF00842 Alanine racemase, C-terminal domain HKK55_RS24630 PF01168 Alanine racemase, N-terminal domain HKK55_RS24640 PF01266 FAD dependent oxidoreductase HKK55_RS24645 PF01037 Lrp/AsnC ligand binding domain HKK55_RS24655 PF01266 FAD dependent oxidoreductase HKK55_RS24665 PF00155 Aminotransferase class I and II HKK55_RS24665 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS24670 PF13091 PLD-like domain HKK55_RS24680 PF00171 Aldehyde dehydrogenase family HKK55_RS24695 PF00471 Ribosomal protein L33 HKK55_RS24700 PF00830 Ribosomal L28 family HKK55_RS24705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HKK55_RS24710 PF04002 RadC-like JAB domain HKK55_RS24715 PF04127 DNA / pantothenate metabolism flavoprotein HKK55_RS24715 PF02441 Flavoprotein HKK55_RS24720 PF00692 dUTPase HKK55_RS24725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKK55_RS24725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKK55_RS24725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKK55_RS24725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKK55_RS24730 PF00696 Amino acid kinase family HKK55_RS24735 PF00156 Phosphoribosyl transferase domain HKK55_RS24740 PF03372 Endonuclease/Exonuclease/phosphatase family HKK55_RS24750 PF01138 3' exoribonuclease family, domain 1 HKK55_RS24750 PF03725 3' exoribonuclease family, domain 2 HKK55_RS24755 PF03755 YicC-like family, N-terminal region HKK55_RS24755 PF08340 Domain of unknown function (DUF1732) HKK55_RS24760 PF00625 Guanylate kinase HKK55_RS24765 PF01192 RNA polymerase Rpb6 HKK55_RS24770 PF02824 TGS domain HKK55_RS24770 PF13291 ACT domain HKK55_RS24770 PF04607 Region found in RelA / SpoT proteins HKK55_RS24775 PF01042 Endoribonuclease L-PSP HKK55_RS24795 PF01618 MotA/TolQ/ExbB proton channel family HKK55_RS24800 PF02472 Biopolymer transport protein ExbD/TolR HKK55_RS24805 PF03544 Gram-negative bacterial TonB protein C-terminal HKK55_RS24810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS24810 PF03466 LysR substrate binding domain HKK55_RS24815 PF00271 Helicase conserved C-terminal domain HKK55_RS24815 PF17191 RecG wedge domain HKK55_RS24815 PF00270 DEAD/DEAH box helicase HKK55_RS24835 PF03781 Sulfatase-modifying factor enzyme 1 HKK55_RS24845 PF00005 ABC transporter HKK55_RS24845 PF12704 MacB-like periplasmic core domain HKK55_RS24845 PF02687 FtsX-like permease family HKK55_RS24850 PF03793 PASTA domain HKK55_RS24850 PF00069 Protein kinase domain HKK55_RS24870 PF00691 OmpA family HKK55_RS24870 PF13677 Membrane MotB of proton-channel complex MotA/MotB HKK55_RS24905 PF05638 Type VI secretion system effector, Hcp HKK55_RS24925 PF07724 AAA domain (Cdc48 subfamily) HKK55_RS24925 PF00004 ATPase family associated with various cellular activities (AAA) HKK55_RS24925 PF10431 C-terminal, D2-small domain, of ClpB protein HKK55_RS24925 PF17871 AAA lid domain HKK55_RS24930 PF04717 Type VI secretion system, phage-baseplate injector HKK55_RS24930 PF16671 Actin cross-linking domain HKK55_RS24935 PF13291 ACT domain HKK55_RS24935 PF04607 Region found in RelA / SpoT proteins HKK55_RS24935 PF02824 TGS domain HKK55_RS24965 PF00216 Bacterial DNA-binding protein HKK55_RS24970 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS24970 PF18113 Rubredoxin binding C-terminal domain HKK55_RS24975 PF00301 Rubredoxin HKK55_RS24980 PF04345 Chorismate lyase HKK55_RS24985 PF01040 UbiA prenyltransferase family HKK55_RS24995 PF00072 Response regulator receiver domain HKK55_RS24995 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS25000 PF00989 PAS fold HKK55_RS25000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS25000 PF11808 Phosphate regulon sensor protein PhoR HKK55_RS25000 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS25005 PF01595 Cyclin M transmembrane N-terminal domain HKK55_RS25005 PF03471 Transporter associated domain HKK55_RS25005 PF00571 CBS domain HKK55_RS25010 PF01551 Peptidase family M23 HKK55_RS25025 PF00072 Response regulator receiver domain HKK55_RS25030 PF01895 PhoU domain HKK55_RS25035 PF00005 ABC transporter HKK55_RS25040 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS25045 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS25050 PF12849 PBP superfamily domain HKK55_RS25055 PF07690 Major Facilitator Superfamily HKK55_RS25060 PF03061 Thioesterase superfamily HKK55_RS25080 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HKK55_RS25080 PF02222 ATP-grasp domain HKK55_RS25085 PF00731 AIR carboxylase HKK55_RS25090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS25090 PF03466 LysR substrate binding domain HKK55_RS25095 PF10415 Fumarase C C-terminus HKK55_RS25095 PF00206 Lyase HKK55_RS25100 PF01235 Sodium:alanine symporter family HKK55_RS25105 PF00710 Asparaginase, N-terminal HKK55_RS25105 PF17763 Glutaminase/Asparaginase C-terminal domain HKK55_RS25110 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HKK55_RS25110 PF12833 Helix-turn-helix domain HKK55_RS25115 PF00850 Histone deacetylase domain HKK55_RS25120 PF13416 Bacterial extracellular solute-binding protein HKK55_RS25130 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS25130 PF00155 Aminotransferase class I and II HKK55_RS25170 PF00364 Biotin-requiring enzyme HKK55_RS25170 PF02436 Conserved carboxylase domain HKK55_RS25170 PF00682 HMGL-like HKK55_RS25175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKK55_RS25175 PF02785 Biotin carboxylase C-terminal domain HKK55_RS25175 PF00289 Biotin carboxylase, N-terminal domain HKK55_RS25180 PF03466 LysR substrate binding domain HKK55_RS25180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS25190 PF01380 SIS domain HKK55_RS25190 PF01418 Helix-turn-helix domain, rpiR family HKK55_RS25195 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS25195 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS25195 PF00563 EAL domain HKK55_RS25200 PF13361 UvrD-like helicase C-terminal domain HKK55_RS25200 PF00580 UvrD/REP helicase N-terminal domain HKK55_RS25215 PF02254 TrkA-N domain HKK55_RS25215 PF00999 Sodium/hydrogen exchanger family HKK55_RS25220 PF03061 Thioesterase superfamily HKK55_RS25225 PF08543 Phosphomethylpyrimidine kinase HKK55_RS25235 PF07683 Cobalamin synthesis protein cobW C-terminal domain HKK55_RS25235 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKK55_RS25245 PF07683 Cobalamin synthesis protein cobW C-terminal domain HKK55_RS25245 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKK55_RS25260 PF11741 AMIN domain HKK55_RS25260 PF01520 N-acetylmuramoyl-L-alanine amidase HKK55_RS25265 PF02649 Type I GTP cyclohydrolase folE2 HKK55_RS25270 PF00005 ABC transporter HKK55_RS25275 PF00950 ABC 3 transport family HKK55_RS25280 PF01297 Zinc-uptake complex component A periplasmic HKK55_RS25285 PF01502 Phosphoribosyl-AMP cyclohydrolase HKK55_RS25295 PF01979 Amidohydrolase family HKK55_RS25300 PF12276 Protein of unknown function (DUF3617) HKK55_RS25305 PF13396 Phospholipase_D-nuclease N-terminal HKK55_RS25305 PF13091 PLD-like domain HKK55_RS25325 PF05114 Protein of unknown function (DUF692) HKK55_RS25355 PF01066 CDP-alcohol phosphatidyltransferase HKK55_RS25360 PF12147 Putative methyltransferase HKK55_RS25360 PF12146 Serine aminopeptidase, S33 HKK55_RS25365 PF00782 Dual specificity phosphatase, catalytic domain HKK55_RS25395 PF01835 MG2 domain HKK55_RS25395 PF17962 Bacterial macroglobulin domain 6 HKK55_RS25395 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HKK55_RS25395 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HKK55_RS25395 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HKK55_RS25395 PF00207 Alpha-2-macroglobulin family HKK55_RS25395 PF07703 Alpha-2-macroglobulin bait region domain HKK55_RS25400 PF00905 Penicillin binding protein transpeptidase domain HKK55_RS25400 PF00912 Transglycosylase HKK55_RS25400 PF06832 Penicillin-Binding Protein C-terminus Family HKK55_RS25410 PF01380 SIS domain HKK55_RS25415 PF08220 DeoR-like helix-turn-helix domain HKK55_RS25415 PF00455 DeoR C terminal sensor domain HKK55_RS25420 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS25420 PF12804 MobA-like NTP transferase domain HKK55_RS25425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HKK55_RS25425 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HKK55_RS25430 PF02874 ATP synthase alpha/beta family, beta-barrel domain HKK55_RS25430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKK55_RS25435 PF00231 ATP synthase HKK55_RS25440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKK55_RS25440 PF00306 ATP synthase alpha/beta chain, C terminal domain HKK55_RS25440 PF02874 ATP synthase alpha/beta family, beta-barrel domain HKK55_RS25445 PF00213 ATP synthase delta (OSCP) subunit HKK55_RS25450 PF00430 ATP synthase B/B' CF(0) HKK55_RS25455 PF00137 ATP synthase subunit C HKK55_RS25460 PF00119 ATP synthase A chain HKK55_RS25465 PF03899 ATP synthase I chain HKK55_RS25470 PF17762 HTH domain found in ParB protein HKK55_RS25470 PF02195 ParB-like nuclease domain HKK55_RS25475 PF13614 AAA domain HKK55_RS25480 PF02527 rRNA small subunit methyltransferase G HKK55_RS25485 PF13932 GidA associated domain HKK55_RS25485 PF01134 Glucose inhibited division protein A HKK55_RS25490 PF12631 MnmE helical domain HKK55_RS25490 PF10396 GTP-binding protein TrmE N-terminus HKK55_RS25490 PF01926 50S ribosome-binding GTPase HKK55_RS25495 PF02096 60Kd inner membrane protein HKK55_RS25495 PF14849 YidC periplasmic domain HKK55_RS25500 PF01809 Putative membrane protein insertion efficiency factor HKK55_RS25505 PF00825 Ribonuclease P HKK55_RS25510 PF00468 Ribosomal protein L34 HKK55_RS25515 PF08299 Bacterial dnaA protein helix-turn-helix HKK55_RS25515 PF00308 Bacterial dnaA protein HKK55_RS25515 PF11638 DnaA N-terminal domain HKK55_RS25520 PF02768 DNA polymerase III beta subunit, C-terminal domain HKK55_RS25520 PF00712 DNA polymerase III beta subunit, N-terminal domain HKK55_RS25520 PF02767 DNA polymerase III beta subunit, central domain HKK55_RS25525 PF02463 RecF/RecN/SMC N terminal domain HKK55_RS25530 PF01751 Toprim domain HKK55_RS25530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS25530 PF00986 DNA gyrase B subunit, carboxyl terminus HKK55_RS25530 PF00204 DNA gyrase B HKK55_RS25530 PF18053 DNA gyrase B subunit insert domain HKK55_RS25535 PF00072 Response regulator receiver domain HKK55_RS25535 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS25545 PF18698 Histidine kinase sensor domain HKK55_RS25545 PF00672 HAMP domain HKK55_RS25545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS25545 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS25545 PF00989 PAS fold HKK55_RS25560 PF05746 DALR anticodon binding domain HKK55_RS25560 PF02092 Glycyl-tRNA synthetase beta subunit HKK55_RS25565 PF02091 Glycyl-tRNA synthetase alpha subunit HKK55_RS25570 PF03352 Methyladenine glycosylase HKK55_RS25585 PF02080 TrkA-C domain HKK55_RS25585 PF02254 TrkA-N domain HKK55_RS25590 PF01029 NusB family HKK55_RS25590 PF01189 16S rRNA methyltransferase RsmB/F HKK55_RS25595 PF02911 Formyl transferase, C-terminal domain HKK55_RS25595 PF00551 Formyl transferase HKK55_RS25600 PF01327 Polypeptide deformylase HKK55_RS25610 PF17782 DprA winged helix domain HKK55_RS25610 PF02481 DNA recombination-mediator protein A HKK55_RS25615 PF01300 Telomere recombination HKK55_RS25620 PF00107 Zinc-binding dehydrogenase HKK55_RS25620 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS25625 PF01218 Coproporphyrinogen III oxidase HKK55_RS25630 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HKK55_RS25630 PF08501 Shikimate dehydrogenase substrate binding domain HKK55_RS25630 PF01488 Shikimate / quinate 5-dehydrogenase HKK55_RS25635 PF00916 Sulfate permease family HKK55_RS25635 PF01740 STAS domain HKK55_RS25640 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HKK55_RS25645 PF00884 Sulfatase HKK55_RS25645 PF12411 Choline sulfatase enzyme C terminal HKK55_RS25650 PF03466 LysR substrate binding domain HKK55_RS25650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS25660 PF05035 2-keto-3-deoxy-galactonokinase HKK55_RS25665 PF01081 KDPG and KHG aldolase HKK55_RS25670 PF13378 Enolase C-terminal domain-like HKK55_RS25670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HKK55_RS25675 PF07690 Major Facilitator Superfamily HKK55_RS25680 PF08031 Berberine and berberine like HKK55_RS25680 PF01565 FAD binding domain HKK55_RS25690 PF00290 Tryptophan synthase alpha chain HKK55_RS25695 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS25700 PF03466 LysR substrate binding domain HKK55_RS25700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS25710 PF07311 Dodecin HKK55_RS25720 PF00296 Luciferase-like monooxygenase HKK55_RS25725 PF02566 OsmC-like protein HKK55_RS25750 PF13419 Haloacid dehalogenase-like hydrolase HKK55_RS25755 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS25760 PF01432 Peptidase family M3 HKK55_RS25765 PF09526 Probable metal-binding protein (DUF2387) HKK55_RS25770 PF01432 Peptidase family M3 HKK55_RS25780 PF13618 Gluconate 2-dehydrogenase subunit 3 HKK55_RS25785 PF05199 GMC oxidoreductase HKK55_RS25785 PF00732 GMC oxidoreductase HKK55_RS25790 PF00034 Cytochrome c HKK55_RS25790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS25795 PF04055 Radical SAM superfamily HKK55_RS25800 PF00484 Carbonic anhydrase HKK55_RS25805 PF01740 STAS domain HKK55_RS25805 PF00916 Sulfate permease family HKK55_RS25815 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HKK55_RS25815 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HKK55_RS25820 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKK55_RS25825 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 HKK55_RS25830 PF00510 Cytochrome c oxidase subunit III HKK55_RS25850 PF02628 Cytochrome oxidase assembly protein HKK55_RS25855 PF01040 UbiA prenyltransferase family HKK55_RS25860 PF02630 SCO1/SenC HKK55_RS25865 PF03180 NLPA lipoprotein HKK55_RS25870 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS25875 PF00005 ABC transporter HKK55_RS25875 PF09383 NIL domain HKK55_RS25880 PF00199 Catalase HKK55_RS25880 PF18011 C-terminal domain found in long catalases HKK55_RS25880 PF06628 Catalase-related immune-responsive HKK55_RS25890 PF00950 ABC 3 transport family HKK55_RS25895 PF00005 ABC transporter HKK55_RS25900 PF01475 Ferric uptake regulator family HKK55_RS25905 PF01297 Zinc-uptake complex component A periplasmic HKK55_RS25910 PF01636 Phosphotransferase enzyme family HKK55_RS25920 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HKK55_RS25920 PF00476 DNA polymerase family A HKK55_RS25920 PF01367 5'-3' exonuclease, C-terminal SAM fold HKK55_RS25920 PF01612 3'-5' exonuclease HKK55_RS25925 PF01926 50S ribosome-binding GTPase HKK55_RS25930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HKK55_RS25935 PF00034 Cytochrome c HKK55_RS25940 PF01323 DSBA-like thioredoxin domain HKK55_RS25950 PF00072 Response regulator receiver domain HKK55_RS25950 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS25955 PF01510 N-acetylmuramoyl-L-alanine amidase HKK55_RS25960 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS25960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS25960 PF00672 HAMP domain HKK55_RS25960 PF08448 PAS fold HKK55_RS25960 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB HKK55_RS25965 PF00158 Sigma-54 interaction domain HKK55_RS25965 PF02954 Bacterial regulatory protein, Fis family HKK55_RS25965 PF00072 Response regulator receiver domain HKK55_RS25975 PF07043 Protein of unknown function (DUF1328) HKK55_RS25985 PF00375 Sodium:dicarboxylate symporter family HKK55_RS25990 PF07670 Nucleoside recognition HKK55_RS26005 PF00005 ABC transporter HKK55_RS26010 PF02405 Permease MlaE HKK55_RS26020 PF00675 Insulinase (Peptidase family M16) HKK55_RS26020 PF05193 Peptidase M16 inactive domain HKK55_RS26025 PF02690 Na+/Pi-cotransporter HKK55_RS26030 PF03741 Integral membrane protein TerC family HKK55_RS26035 PF03600 Citrate transporter HKK55_RS26075 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HKK55_RS26075 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HKK55_RS26080 PF02233 NAD(P) transhydrogenase beta subunit HKK55_RS26085 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HKK55_RS26090 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HKK55_RS26090 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HKK55_RS26095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS26095 PF03466 LysR substrate binding domain HKK55_RS26100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS26100 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS26100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS26105 PF02515 CoA-transferase family III HKK55_RS26155 PF02743 Cache domain HKK55_RS26155 PF00672 HAMP domain HKK55_RS26155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS26165 PF00668 Condensation domain HKK55_RS26165 PF00501 AMP-binding enzyme HKK55_RS26165 PF00550 Phosphopantetheine attachment site HKK55_RS26165 PF00975 Thioesterase domain HKK55_RS26165 PF13193 AMP-binding enzyme C-terminal domain HKK55_RS26180 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS26180 PF07729 FCD domain HKK55_RS26190 PF13188 PAS domain HKK55_RS26190 PF00563 EAL domain HKK55_RS26190 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS26190 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS26205 PF02321 Outer membrane efflux protein HKK55_RS26210 PF00005 ABC transporter HKK55_RS26210 PF00664 ABC transporter transmembrane region HKK55_RS26210 PF03412 Peptidase C39 family HKK55_RS26215 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS26215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS26220 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HKK55_RS26230 PF00005 ABC transporter HKK55_RS26235 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS26240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS26240 PF03466 LysR substrate binding domain HKK55_RS26245 PF07690 Major Facilitator Superfamily HKK55_RS26250 PF13533 Biotin-lipoyl like HKK55_RS26255 PF02321 Outer membrane efflux protein HKK55_RS26285 PF04632 Fusaric acid resistance protein family HKK55_RS26295 PF13533 Biotin-lipoyl like HKK55_RS26300 PF02321 Outer membrane efflux protein HKK55_RS26310 PF06097 Bacterial protein of unknown function (DUF945) HKK55_RS26320 PF14883 Hypothetical glycosyl hydrolase family 13 HKK55_RS26320 PF01522 Polysaccharide deacetylase HKK55_RS26325 PF00535 Glycosyl transferase family 2 HKK55_RS26335 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HKK55_RS26335 PF17287 POTRA domain HKK55_RS26335 PF08479 POTRA domain, ShlB-type HKK55_RS26405 PF03783 Curli production assembly/transport component CsgG HKK55_RS26415 PF05643 Putative bacterial lipoprotein (DUF799) HKK55_RS26420 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKK55_RS26420 PF08548 Peptidase M10 serralysin C terminal HKK55_RS26425 PF12450 von Willebrand factor HKK55_RS26425 PF00092 von Willebrand factor type A domain HKK55_RS26425 PF12034 Domain of unknown function (DUF3520) HKK55_RS26430 PF08281 Sigma-70, region 4 HKK55_RS26430 PF04542 Sigma-70 region 2 HKK55_RS26485 PF00171 Aldehyde dehydrogenase family HKK55_RS26490 PF00202 Aminotransferase class-III HKK55_RS26495 PF02371 Transposase IS116/IS110/IS902 family HKK55_RS26495 PF01548 Transposase HKK55_RS26500 PF00072 Response regulator receiver domain HKK55_RS26500 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS26505 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS26505 PF00072 Response regulator receiver domain HKK55_RS26510 PF00672 HAMP domain HKK55_RS26510 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS26510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS26515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKK55_RS26515 PF00529 HlyD membrane-fusion protein of T1SS HKK55_RS26520 PF00873 AcrB/AcrD/AcrF family HKK55_RS26530 PF00072 Response regulator receiver domain HKK55_RS26530 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS26540 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS26540 PF00563 EAL domain HKK55_RS26540 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS26555 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS26560 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS26565 PF12857 TOBE-like domain HKK55_RS26565 PF00005 ABC transporter HKK55_RS26590 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS26590 PF00072 Response regulator receiver domain HKK55_RS26595 PF12833 Helix-turn-helix domain HKK55_RS26595 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HKK55_RS26605 PF00884 Sulfatase HKK55_RS26610 PF00005 ABC transporter HKK55_RS26615 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS26620 PF09084 NMT1/THI5 like HKK55_RS26625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS26625 PF03466 LysR substrate binding domain HKK55_RS26630 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HKK55_RS26635 PF16347 Domain of unknown function (DUF4976) HKK55_RS26635 PF00884 Sulfatase HKK55_RS26640 PF03466 LysR substrate binding domain HKK55_RS26640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS26645 PF00593 TonB dependent receptor HKK55_RS26645 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS26650 PF07690 Major Facilitator Superfamily HKK55_RS26655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HKK55_RS26660 PF03466 LysR substrate binding domain HKK55_RS26660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS26665 PF03544 Gram-negative bacterial TonB protein C-terminal HKK55_RS26670 PF01618 MotA/TolQ/ExbB proton channel family HKK55_RS26675 PF02472 Biopolymer transport protein ExbD/TolR HKK55_RS26685 PF00158 Sigma-54 interaction domain HKK55_RS26690 PF03180 NLPA lipoprotein HKK55_RS26700 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS26705 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS26710 PF00005 ABC transporter HKK55_RS26715 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS26720 PF02463 RecF/RecN/SMC N terminal domain HKK55_RS26735 PF00873 AcrB/AcrD/AcrF family HKK55_RS26750 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS26755 PF00005 ABC transporter HKK55_RS26755 PF09383 NIL domain HKK55_RS26760 PF03180 NLPA lipoprotein HKK55_RS26765 PF00296 Luciferase-like monooxygenase HKK55_RS26770 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS26770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS26775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS26775 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS26800 PF00291 Pyridoxal-phosphate dependent enzyme HKK55_RS26805 PF00132 Bacterial transferase hexapeptide (six repeats) HKK55_RS26810 PF02028 BCCT, betaine/carnitine/choline family transporter HKK55_RS26825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS26825 PF03466 LysR substrate binding domain HKK55_RS26830 PF03573 outer membrane porin, OprD family HKK55_RS26835 PF00248 Aldo/keto reductase family HKK55_RS26840 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HKK55_RS26845 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS26850 PF00005 ABC transporter HKK55_RS26855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HKK55_RS26860 PF04262 Glutamate-cysteine ligase HKK55_RS26870 PF16921 Tex protein YqgF-like domain HKK55_RS26870 PF09371 Tex-like protein N-terminal domain HKK55_RS26870 PF00575 S1 RNA binding domain HKK55_RS26870 PF17674 HHH domain HKK55_RS26875 PF00072 Response regulator receiver domain HKK55_RS26875 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS26880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS26880 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS26880 PF00672 HAMP domain HKK55_RS26885 PF08443 RimK-like ATP-grasp domain HKK55_RS26885 PF18030 RimK PreATP-grasp domain HKK55_RS26890 PF08443 RimK-like ATP-grasp domain HKK55_RS26890 PF18030 RimK PreATP-grasp domain HKK55_RS26895 PF01479 S4 domain HKK55_RS26900 PF01430 Hsp33 protein HKK55_RS26905 PF01293 Phosphoenolpyruvate carboxykinase HKK55_RS26920 PF00570 HRDC domain HKK55_RS26920 PF09382 RQC domain HKK55_RS26920 PF16124 RecQ zinc-binding HKK55_RS26920 PF00271 Helicase conserved C-terminal domain HKK55_RS26920 PF00270 DEAD/DEAH box helicase HKK55_RS26925 PF03061 Thioesterase superfamily HKK55_RS26935 PF00384 Molybdopterin oxidoreductase HKK55_RS26940 PF02634 FdhD/NarQ family HKK55_RS26945 PF01476 LysM domain HKK55_RS26945 PF04972 BON domain HKK55_RS26950 PF13419 Haloacid dehalogenase-like hydrolase HKK55_RS26955 PF00293 NUDIX domain HKK55_RS26960 PF00459 Inositol monophosphatase family HKK55_RS26970 PF00072 Response regulator receiver domain HKK55_RS26970 PF00158 Sigma-54 interaction domain HKK55_RS26970 PF02954 Bacterial regulatory protein, Fis family HKK55_RS26975 PF02743 Cache domain HKK55_RS26975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS26975 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS26980 PF04321 RmlD substrate binding domain HKK55_RS26985 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HKK55_RS26990 PF00483 Nucleotidyl transferase HKK55_RS26995 PF16363 GDP-mannose 4,6 dehydratase HKK55_RS27000 PF00202 Aminotransferase class-III HKK55_RS27010 PF04371 Porphyromonas-type peptidyl-arginine deiminase HKK55_RS27020 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS27020 PF00593 TonB dependent receptor HKK55_RS27030 PF03573 outer membrane porin, OprD family HKK55_RS27040 PF01361 Tautomerase enzyme HKK55_RS27080 PF01569 PAP2 superfamily HKK55_RS27120 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HKK55_RS27135 PF03472 Autoinducer binding domain HKK55_RS27135 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS27140 PF01965 DJ-1/PfpI family HKK55_RS27150 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS27155 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS27160 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS27165 PF00005 ABC transporter HKK55_RS27170 PF00324 Amino acid permease HKK55_RS27205 PF02321 Outer membrane efflux protein HKK55_RS27210 PF03412 Peptidase C39 family HKK55_RS27210 PF00005 ABC transporter HKK55_RS27210 PF00664 ABC transporter transmembrane region HKK55_RS27225 PF00082 Subtilase family HKK55_RS27230 PF00589 Phage integrase family HKK55_RS27250 PF02899 Phage integrase, N-terminal SAM-like domain HKK55_RS27250 PF00589 Phage integrase family HKK55_RS27265 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HKK55_RS27265 PF17287 POTRA domain HKK55_RS27265 PF08479 POTRA domain, ShlB-type HKK55_RS27280 PF06958 S-type Pyocin HKK55_RS27280 PF11429 Colicin D HKK55_RS27280 PF03515 Colicin-like bacteriocin tRNase domain HKK55_RS27285 PF09204 Bacterial self-protective colicin-like immunity HKK55_RS27320 PF03869 Arc-like DNA binding domain HKK55_RS27325 PF00300 Histidine phosphatase superfamily (branch 1) HKK55_RS27355 PF04362 Bacterial Fe(2+) trafficking HKK55_RS27360 PF14815 NUDIX domain HKK55_RS27360 PF00633 Helix-hairpin-helix motif HKK55_RS27360 PF00730 HhH-GPD superfamily base excision DNA repair protein HKK55_RS27360 PF10576 Iron-sulfur binding domain of endonuclease III HKK55_RS27370 PF07690 Major Facilitator Superfamily HKK55_RS27375 PF00475 Imidazoleglycerol-phosphate dehydratase HKK55_RS27380 PF00117 Glutamine amidotransferase class-I HKK55_RS27390 PF00977 Histidine biosynthesis protein HKK55_RS27395 PF00977 Histidine biosynthesis protein HKK55_RS27410 PF04748 Divergent polysaccharide deacetylase HKK55_RS27415 PF03572 Peptidase family S41 HKK55_RS27415 PF13180 PDZ domain HKK55_RS27420 PF01551 Peptidase family M23 HKK55_RS27425 PF01676 Metalloenzyme superfamily HKK55_RS27425 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HKK55_RS27430 PF00581 Rhodanese-like domain HKK55_RS27435 PF00462 Glutaredoxin HKK55_RS27440 PF02556 Preprotein translocase subunit SecB HKK55_RS27445 PF00588 SpoU rRNA Methylase family HKK55_RS27455 PF02954 Bacterial regulatory protein, Fis family HKK55_RS27455 PF00072 Response regulator receiver domain HKK55_RS27455 PF00158 Sigma-54 interaction domain HKK55_RS27460 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS27460 PF00989 PAS fold HKK55_RS27460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS27465 PF01817 Chorismate mutase type II HKK55_RS27470 PF00120 Glutamine synthetase, catalytic domain HKK55_RS27470 PF03951 Glutamine synthetase, beta-Grasp domain HKK55_RS27475 PF02568 Thiamine biosynthesis protein (ThiI) HKK55_RS27475 PF02926 THUMP domain HKK55_RS27490 PF00343 Carbohydrate phosphorylase HKK55_RS27505 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HKK55_RS27515 PF08212 Lipocalin-like domain HKK55_RS27520 PF01979 Amidohydrolase family HKK55_RS27525 PF07702 UTRA domain HKK55_RS27525 PF00392 Bacterial regulatory proteins, gntR family HKK55_RS27530 PF05962 HutD HKK55_RS27535 PF17391 Urocanase N-terminal domain HKK55_RS27535 PF17392 Urocanase C-terminal domain HKK55_RS27535 PF01175 Urocanase Rossmann-like domain HKK55_RS27540 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HKK55_RS27550 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS27555 PF00571 CBS domain HKK55_RS27555 PF00005 ABC transporter HKK55_RS27560 PF00221 Aromatic amino acid lyase HKK55_RS27565 PF00221 Aromatic amino acid lyase HKK55_RS27570 PF00324 Amino acid permease HKK55_RS27575 PF01979 Amidohydrolase family HKK55_RS27585 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HKK55_RS27590 PF07859 alpha/beta hydrolase fold HKK55_RS27595 PF00561 alpha/beta hydrolase fold HKK55_RS27600 PF02580 D-Tyr-tRNA(Tyr) deacylase HKK55_RS27605 PF04349 Periplasmic glucan biosynthesis protein, MdoG HKK55_RS27610 PF00535 Glycosyl transferase family 2 HKK55_RS27615 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS27620 PF00497 Bacterial extracellular solute-binding proteins, family 3 HKK55_RS27625 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS27630 PF00005 ABC transporter HKK55_RS27635 PF00672 HAMP domain HKK55_RS27635 PF16591 Helical bimodular sensor domain HKK55_RS27635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS27640 PF00672 HAMP domain HKK55_RS27640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS27640 PF16591 Helical bimodular sensor domain HKK55_RS27650 PF00902 Sec-independent protein translocase protein (TatC) HKK55_RS27655 PF02416 mttA/Hcf106 family HKK55_RS27660 PF02416 mttA/Hcf106 family HKK55_RS27665 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HKK55_RS27670 PF01502 Phosphoribosyl-AMP cyclohydrolase HKK55_RS27675 PF03109 ABC1 family HKK55_RS27685 PF01209 ubiE/COQ5 methyltransferase family HKK55_RS27710 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HKK55_RS27715 PF00561 alpha/beta hydrolase fold HKK55_RS27720 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HKK55_RS27730 PF00004 ATPase family associated with various cellular activities (AAA) HKK55_RS27730 PF07724 AAA domain (Cdc48 subfamily) HKK55_RS27735 PF00227 Proteasome subunit HKK55_RS27745 PF05746 DALR anticodon binding domain HKK55_RS27745 PF03485 Arginyl tRNA synthetase N terminal domain HKK55_RS27745 PF00750 tRNA synthetases class I (R) HKK55_RS27750 PF18074 Primosomal protein N C-terminal domain HKK55_RS27750 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HKK55_RS27750 PF17764 3′ DNA-binding domain (3′BD) HKK55_RS27750 PF00271 Helicase conserved C-terminal domain HKK55_RS27750 PF00270 DEAD/DEAH box helicase HKK55_RS27755 PF01197 Ribosomal protein L31 HKK55_RS27765 PF03949 Malic enzyme, NAD binding domain HKK55_RS27765 PF00390 Malic enzyme, N-terminal domain HKK55_RS27770 PF00912 Transglycosylase HKK55_RS27770 PF00905 Penicillin binding protein transpeptidase domain HKK55_RS27770 PF17092 Penicillin-binding protein OB-like domain HKK55_RS27795 PF03958 Bacterial type II/III secretion system short domain HKK55_RS27795 PF11741 AMIN domain HKK55_RS27795 PF00263 Bacterial type II and III secretion system protein HKK55_RS27795 PF07660 Secretin and TonB N terminus short domain HKK55_RS27800 PF01202 Shikimate kinase HKK55_RS27805 PF01761 3-dehydroquinate synthase HKK55_RS27815 PF01493 GXGXG motif HKK55_RS27815 PF01645 Conserved region in glutamate synthase HKK55_RS27815 PF04898 Glutamate synthase central domain HKK55_RS27815 PF00310 Glutamine amidotransferases class-II HKK55_RS27820 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKK55_RS27820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HKK55_RS27825 PF01208 Uroporphyrinogen decarboxylase (URO-D) HKK55_RS27830 PF07690 Major Facilitator Superfamily HKK55_RS27835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS27835 PF03466 LysR substrate binding domain HKK55_RS27850 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK55_RS27850 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK55_RS27865 PF00109 Beta-ketoacyl synthase, N-terminal domain HKK55_RS27865 PF02801 Beta-ketoacyl synthase, C-terminal domain HKK55_RS27875 PF08241 Methyltransferase domain HKK55_RS27900 PF00221 Aromatic amino acid lyase HKK55_RS27915 PF07977 FabA-like domain HKK55_RS27925 PF00550 Phosphopantetheine attachment site HKK55_RS27930 PF00550 Phosphopantetheine attachment site HKK55_RS27945 PF13614 AAA domain HKK55_RS27955 PF00085 Thioredoxin HKK55_RS27965 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HKK55_RS27970 PF00924 Mechanosensitive ion channel HKK55_RS27970 PF12795 Mechanosensitive ion channel porin domain HKK55_RS27970 PF12794 Mechanosensitive ion channel inner membrane domain 1 HKK55_RS27975 PF03471 Transporter associated domain HKK55_RS27975 PF00999 Sodium/hydrogen exchanger family HKK55_RS27975 PF02080 TrkA-C domain HKK55_RS27980 PF00672 HAMP domain HKK55_RS27980 PF12729 Four helix bundle sensory module for signal transduction HKK55_RS27980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS27995 PF02770 Acyl-CoA dehydrogenase, middle domain HKK55_RS27995 PF12806 Acetyl-CoA dehydrogenase C-terminal like HKK55_RS27995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HKK55_RS27995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HKK55_RS28000 PF00171 Aldehyde dehydrogenase family HKK55_RS28000 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HKK55_RS28000 PF14850 DNA-binding domain of Proline dehydrogenase HKK55_RS28000 PF01619 Proline dehydrogenase HKK55_RS28005 PF00474 Sodium:solute symporter family HKK55_RS28015 PF04717 Type VI secretion system, phage-baseplate injector HKK55_RS28025 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HKK55_RS28030 PF01625 Peptide methionine sulfoxide reductase HKK55_RS28035 PF00563 EAL domain HKK55_RS28035 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS28035 PF03707 Bacterial signalling protein N terminal repeat HKK55_RS28040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKK55_RS28040 PF00364 Biotin-requiring enzyme HKK55_RS28040 PF02817 e3 binding domain HKK55_RS28045 PF00456 Transketolase, thiamine diphosphate binding domain HKK55_RS28045 PF17831 Pyruvate dehydrogenase E1 component middle domain HKK55_RS28050 PF08335 GlnD PII-uridylyltransferase HKK55_RS28050 PF03710 Glutamate-ammonia ligase adenylyltransferase HKK55_RS28055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HKK55_RS28060 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HKK55_RS28065 PF00534 Glycosyl transferases group 1 HKK55_RS28065 PF13439 Glycosyltransferase Family 4 HKK55_RS28095 PF00593 TonB dependent receptor HKK55_RS28095 PF07715 TonB-dependent Receptor Plug Domain HKK55_RS28105 PF16861 Carbamoyltransferase C-terminus HKK55_RS28105 PF02543 Carbamoyltransferase N-terminus HKK55_RS28110 PF13439 Glycosyltransferase Family 4 HKK55_RS28110 PF00534 Glycosyl transferases group 1 HKK55_RS28130 PF00535 Glycosyl transferase family 2 HKK55_RS28135 PF04932 O-Antigen ligase HKK55_RS28140 PF00664 ABC transporter transmembrane region HKK55_RS28140 PF00005 ABC transporter HKK55_RS28150 PF00009 Elongation factor Tu GTP binding domain HKK55_RS28155 PF00294 pfkB family carbohydrate kinase HKK55_RS28155 PF01467 Cytidylyltransferase-like HKK55_RS28160 PF01370 NAD dependent epimerase/dehydratase family HKK55_RS28170 PF00248 Aldo/keto reductase family HKK55_RS28175 PF01266 FAD dependent oxidoreductase HKK55_RS28180 PF00893 Small Multidrug Resistance protein HKK55_RS28185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS28185 PF03466 LysR substrate binding domain HKK55_RS28190 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HKK55_RS28195 PF02321 Outer membrane efflux protein HKK55_RS28200 PF01964 Radical SAM ThiC family HKK55_RS28200 PF13667 ThiC-associated domain HKK55_RS28215 PF00293 NUDIX domain HKK55_RS28225 PF00149 Calcineurin-like phosphoesterase HKK55_RS28235 PF07690 Major Facilitator Superfamily HKK55_RS28240 PF03466 LysR substrate binding domain HKK55_RS28240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS28245 PF05728 Uncharacterised protein family (UPF0227) HKK55_RS28250 PF01751 Toprim domain HKK55_RS28250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS28250 PF00204 DNA gyrase B HKK55_RS28250 PF00986 DNA gyrase B subunit, carboxyl terminus HKK55_RS28265 PF00521 DNA gyrase/topoisomerase IV, subunit A HKK55_RS28265 PF03989 DNA gyrase C-terminal domain, beta-propeller HKK55_RS28285 PF02666 Phosphatidylserine decarboxylase HKK55_RS28290 PF00581 Rhodanese-like domain HKK55_RS28300 PF01618 MotA/TolQ/ExbB proton channel family HKK55_RS28305 PF00691 OmpA family HKK55_RS28305 PF13677 Membrane MotB of proton-channel complex MotA/MotB HKK55_RS28310 PF03193 RsgA GTPase HKK55_RS28315 PF00929 Exonuclease HKK55_RS28320 PF03458 UPF0126 domain HKK55_RS28325 PF08331 Domain of unknown function (DUF1730) HKK55_RS28330 PF01256 Carbohydrate kinase HKK55_RS28330 PF03853 YjeF-related protein N-terminus HKK55_RS28335 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HKK55_RS28340 PF11741 AMIN domain HKK55_RS28340 PF01520 N-acetylmuramoyl-L-alanine amidase HKK55_RS28345 PF08676 MutL C terminal dimerisation domain HKK55_RS28345 PF01119 DNA mismatch repair protein, C-terminal domain HKK55_RS28355 PF17209 Hfq protein HKK55_RS28360 PF13167 GTP-binding GTPase N-terminal HKK55_RS28360 PF16360 GTP-binding GTPase Middle Region HKK55_RS28360 PF01926 50S ribosome-binding GTPase HKK55_RS28365 PF01145 SPFH domain / Band 7 family HKK55_RS28365 PF12221 Bacterial membrane protein N terminal HKK55_RS28370 PF01145 SPFH domain / Band 7 family HKK55_RS28375 PF13393 Histidyl-tRNA synthetase HKK55_RS28380 PF00709 Adenylosuccinate synthetase HKK55_RS28385 PF17200 Single Cache domain 2 HKK55_RS28385 PF00672 HAMP domain HKK55_RS28385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS28390 PF00528 Binding-protein-dependent transport system inner membrane component HKK55_RS28395 PF01547 Bacterial extracellular solute-binding protein HKK55_RS28410 PF00575 S1 RNA binding domain HKK55_RS28410 PF08461 Ribonuclease R winged-helix domain HKK55_RS28410 PF00773 RNB domain HKK55_RS28410 PF17876 Cold shock domain HKK55_RS28410 PF08206 Ribonuclease B OB domain HKK55_RS28415 PF08032 RNA 2'-O ribose methyltransferase substrate binding HKK55_RS28415 PF00588 SpoU rRNA Methylase family HKK55_RS28420 PF01250 Ribosomal protein S6 HKK55_RS28425 PF01084 Ribosomal protein S18 HKK55_RS28435 PF03948 Ribosomal protein L9, C-terminal domain HKK55_RS28435 PF01281 Ribosomal protein L9, N-terminal domain HKK55_RS28440 PF03796 DnaB-like helicase C terminal domain HKK55_RS28440 PF00772 DnaB-like helicase N terminal domain HKK55_RS28450 PF08497 Radical SAM N-terminal HKK55_RS28450 PF04055 Radical SAM superfamily HKK55_RS28450 PF11842 Domain of unknown function (DUF3362) HKK55_RS28480 PF04168 A predicted alpha-helical domain with a conserved ER motif. HKK55_RS28480 PF14403 Circularly permuted ATP-grasp type 2 HKK55_RS28495 PF03641 Possible lysine decarboxylase HKK55_RS28500 PF00127 Copper binding proteins, plastocyanin/azurin family HKK55_RS28505 PF02540 NAD synthase HKK55_RS28510 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HKK55_RS28510 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HKK55_RS28515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS28515 PF03466 LysR substrate binding domain HKK55_RS28520 PF00171 Aldehyde dehydrogenase family HKK55_RS28525 PF01266 FAD dependent oxidoreductase HKK55_RS28530 PF13458 Periplasmic binding protein HKK55_RS28535 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS28540 PF11862 Domain of unknown function (DUF3382) HKK55_RS28540 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS28545 PF00005 ABC transporter HKK55_RS28545 PF12399 Branched-chain amino acid ATP-binding cassette transporter HKK55_RS28550 PF00005 ABC transporter HKK55_RS28555 PF00106 short chain dehydrogenase HKK55_RS28570 PF04955 HupE / UreJ protein HKK55_RS28575 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKK55_RS28580 PF01730 UreF HKK55_RS28585 PF05194 UreE urease accessory protein, C-terminal domain HKK55_RS28585 PF02814 UreE urease accessory protein, N-terminal domain HKK55_RS28590 PF00877 NlpC/P60 family HKK55_RS28595 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS28605 PF05170 AsmA family HKK55_RS28615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS28615 PF03466 LysR substrate binding domain HKK55_RS28620 PF02525 Flavodoxin-like fold HKK55_RS28625 PF00893 Small Multidrug Resistance protein HKK55_RS28630 PF00561 alpha/beta hydrolase fold HKK55_RS28635 PF00892 EamA-like transporter family HKK55_RS28640 PF02311 AraC-like ligand binding domain HKK55_RS28640 PF12833 Helix-turn-helix domain HKK55_RS28655 PF00012 Hsp70 protein HKK55_RS28660 PF01556 DnaJ C terminal domain HKK55_RS28660 PF00226 DnaJ domain HKK55_RS28670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS28670 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS28670 PF01590 GAF domain HKK55_RS28670 PF08446 PAS fold HKK55_RS28670 PF00360 Phytochrome region HKK55_RS28675 PF01979 Amidohydrolase family HKK55_RS28675 PF00449 Urease alpha-subunit, N-terminal domain HKK55_RS28680 PF00699 Urease beta subunit HKK55_RS28685 PF13673 Acetyltransferase (GNAT) domain HKK55_RS28695 PF00547 Urease, gamma subunit HKK55_RS28700 PF01774 UreD urease accessory protein HKK55_RS28705 PF00005 ABC transporter HKK55_RS28710 PF12399 Branched-chain amino acid ATP-binding cassette transporter HKK55_RS28710 PF00005 ABC transporter HKK55_RS28720 PF02653 Branched-chain amino acid transport system / permease component HKK55_RS28725 PF13458 Periplasmic binding protein HKK55_RS28730 PF01032 FecCD transport family HKK55_RS28740 PF00005 ABC transporter HKK55_RS28770 PF02571 Precorrin-6x reductase CbiJ/CobK HKK55_RS28775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKK55_RS28785 PF02570 Precorrin-8X methylmutase HKK55_RS28790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKK55_RS28795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKK55_RS28805 PF01914 MarC family integral membrane protein HKK55_RS28810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS28810 PF00512 His Kinase A (phospho-acceptor) domain HKK55_RS28810 PF01627 Hpt domain HKK55_RS28810 PF00072 Response regulator receiver domain HKK55_RS28810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HKK55_RS28810 PF00672 HAMP domain HKK55_RS28815 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HKK55_RS28815 PF02843 Phosphoribosylglycinamide synthetase, C domain HKK55_RS28815 PF02844 Phosphoribosylglycinamide synthetase, N domain HKK55_RS28820 PF02142 MGS-like domain HKK55_RS28820 PF01808 AICARFT/IMPCHase bienzyme HKK55_RS28825 PF02954 Bacterial regulatory protein, Fis family HKK55_RS28830 PF01207 Dihydrouridine synthase (Dus) HKK55_RS28845 PF02785 Biotin carboxylase C-terminal domain HKK55_RS28845 PF00289 Biotin carboxylase, N-terminal domain HKK55_RS28845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKK55_RS28850 PF00364 Biotin-requiring enzyme HKK55_RS28855 PF01220 Dehydroquinase class II HKK55_RS28860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKK55_RS28865 PF00990 Diguanylate cyclase, GGDEF domain HKK55_RS28865 PF00072 Response regulator receiver domain HKK55_RS28875 PF00293 NUDIX domain HKK55_RS28880 PF01253 Translation initiation factor SUI1 HKK55_RS28885 PF17810 Arginine decarboxylase helical bundle domain HKK55_RS28885 PF17944 Arginine decarboxylase C-terminal helical extension HKK55_RS28885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HKK55_RS28900 PF01554 MatE HKK55_RS28920 PF03466 LysR substrate binding domain HKK55_RS28920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS28925 PF07678 A-macroglobulin TED domain HKK55_RS28925 PF01835 MG2 domain HKK55_RS28925 PF07703 Alpha-2-macroglobulin bait region domain HKK55_RS28925 PF00207 Alpha-2-macroglobulin family HKK55_RS28925 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HKK55_RS28925 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HKK55_RS28925 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HKK55_RS28925 PF17962 Bacterial macroglobulin domain 6 HKK55_RS28925 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HKK55_RS28935 PF06832 Penicillin-Binding Protein C-terminus Family HKK55_RS28935 PF00912 Transglycosylase HKK55_RS28935 PF00905 Penicillin binding protein transpeptidase domain HKK55_RS28945 PF13847 Methyltransferase domain HKK55_RS28965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKK55_RS28965 PF08447 PAS fold HKK55_RS28965 PF08448 PAS fold HKK55_RS28980 PF00196 Bacterial regulatory proteins, luxR family HKK55_RS28980 PF00072 Response regulator receiver domain HKK55_RS29005 PF00437 Type II/IV secretion system protein HKK55_RS29015 PF00263 Bacterial type II and III secretion system protein HKK55_RS29015 PF04972 BON domain HKK55_RS29015 PF13629 Pilus formation protein N terminal region HKK55_RS29030 PF00072 Response regulator receiver domain HKK55_RS29030 PF00486 Transcriptional regulatory protein, C terminal HKK55_RS29055 PF02803 Thiolase, C-terminal domain HKK55_RS29055 PF00108 Thiolase, N-terminal domain HKK55_RS29065 PF00376 MerR family regulatory protein HKK55_RS29065 PF09278 MerR, DNA binding HKK55_RS29080 PF07690 Major Facilitator Superfamily HKK55_RS29090 PF08240 Alcohol dehydrogenase GroES-like domain HKK55_RS29090 PF00107 Zinc-binding dehydrogenase HKK55_RS29095 PF03992 Antibiotic biosynthesis monooxygenase HKK55_RS29100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS29100 PF03466 LysR substrate binding domain HKK55_RS29110 PF00962 Adenosine/AMP deaminase HKK55_RS29115 PF01699 Sodium/calcium exchanger protein HKK55_RS29120 PF01979 Amidohydrolase family HKK55_RS29130 PF09186 Domain of unknown function (DUF1949) HKK55_RS29130 PF01205 Uncharacterized protein family UPF0029 HKK55_RS29135 PF00440 Bacterial regulatory proteins, tetR family HKK55_RS29135 PF08362 YcdC-like protein, C-terminal region HKK55_RS29140 PF00860 Permease family HKK55_RS29145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKK55_RS29145 PF03466 LysR substrate binding domain HKK55_RS29150 PF00202 Aminotransferase class-III HKK55_RS29155 PF00171 Aldehyde dehydrogenase family