        recF NONE
        gyrB    6266 ..    6287 + -15.9  -5.45802   ACAACGCCCTCGAAA           GGCCAACCC TCAG GGGTTGGCC            TTTTTGTTTTCCCGC 100 82
LOY33_RS00030 NONE
LOY33_RS00035 NONE
LOY33_RS00040   11110 ..   11149 +  -6.9  -2.73875   TGGTGGTCAACACCC  TGGCGCGCTGAACGCCG CTCACT CGGCGAGCAGTTCGCCC   TGCTCTTCGGCGCAC  51 15
LOY33_RS00050 NONE
LOY33_RS00055   15546 ..   15561 +  -7.5  -5.60993   TAATCCACAAAAAAA              CCGGC CTAAAA GCCGG               TTTTTTTATCGCGCG  95 53
LOY33_RS00080 NONE
LOY33_RS00085   22066 ..   22078 +  -3.3  -3.22077   ACGTGGAACAGCTTC                TCCAC GTC GCGGA                TGTACTTTTTATCCA  46 491
        dprA NONE
LOY33_RS00120   28287 ..   28338 +    -6  -2.90615   TGAGCCTTGGCCGCC TCGGCCAGCGGATAGC--GCTGCTGG ATAT CCA-CAGCCAGCTTGCCGCTGG-CGA TCATTTCGAACAGCT  48 177
        hemF NONE
        aroE   31140 ..   31173 +  -7.4  -3.28712   TCGATGAGCTGCGCC     GGCAGCTGGCGCG GGGCTAGAA CGCGGC-GCTGCC     TTCTCCGGCAAGGCC  56 6
LOY33_RS00150   34097 ..   34122 +  -8.1  -3.10164   CGGCAGGTCGGTGTG         GCGGCGCAGGC GCTC GATGGCGCCGC          TTACCTGATCGCTGG  54 326
LOY33_RS00165   37209 ..   37223 +  -4.2  -3.64822   GATTTCCGCTTCCAT               GCTTTG CAA CGAGGC               TTTACGTAGCGAGCT  54 310
LOY33_RS00175 NONE
LOY33_RS00180   37905 ..   37962 +   -26  -3.19246   GCGGCTGATCGGTGA GT--CTTTCGCCAGCAAGGCTGGCTCCT ACGT AGGAGCCAGCCTTGCTGGCAAAAGGGAC TTCAGTTGCCCTTGA 100 33
LOY33_RS00190   39604 ..   39616 +  -3.3  -3.41602   GGCGCAGATCAGAAC                GACGC ACG GCTTC                TTGTGGTCAAATGGC  47 45
LOY33_RS00195   40401 ..   40414 +  -2.3  -3.62572   CATCCGGCAGGCAAA               CCGGT GCCG ACCAG                TTTGCGCTGCTCGTC  51 523
LOY33_RS00210   42174 ..   42184 +  -2.4  -4.63218   TCATCAGCGTCTGCG                 CCGG GTC CAGG                 TTTTCTTCGGCCAGC  70 229
        prlC NONE
LOY33_RS00230 NONE
LOY33_RS00235 NONE
LOY33_RS00240   48891 ..   48917 +  -9.6  -5.20216   TGTCGCTGCTGTAAT         GCATTAATGG GTAGTTG CCATTAATGC         TTTTTTGCTAGTATC 100 27
LOY33_RS00245   49941 ..   49981 + -10.9  -3.14931   TTTCCATGAATGCCT  TGCCGGCCTGCCGGCGGCT TGC GGCTGCCCGCGTGGCGGCG  TTACTGCGGCGTGCG  69 114
LOY33_RS00250   51589 ..   51629 + -12.7  -3.14211   ACGATTCGCCAGCAA GGCTGGCTCCTACACGGG GTGTAA TCC-TGTAGGAGCCAGCA  TTGCTGGCGAAGGCT  76 41
        coxB NONE
        ctaD NONE
LOY33_RS00270 NONE
LOY33_RS00275 NONE
LOY33_RS00285 NONE
LOY33_RS00290 NONE
LOY33_RS00295 NONE
        cyoE NONE
LOY33_RS00305   61092 ..   61120 +  -8.7  -3.91897   GGAGCGGGCTTGACC        CGCGATGGGCTGC GTA GCAGCCCTTGGCA        TTTCTGAATCAGAAC  72 108
        katE   66310 ..   66350 +  -8.1  -4.08064   TCTATTTTCGTGATT  TTCAACGCCACTACGGTGC TCG GCGCCGTGGGGTCGATGAC  TTTTGCCGGCGGCTT  69 319
LOY33_RS00350   70400 ..   70416 +  -4.4  -3.28712   GCCCGGTCAGGTGGG              TGCCTT CGAAC AAGGCG              TTGTCGCGGAACAGG  49 469
        polA   74450 ..   74468 +  -4.4  -5.75342   CCCGAACTTCCCCCT             CCCCATAC GAA GTCCGGGG             TTTTTTTTGCCCGGC 100 265
LOY33_RS00375   76213 ..   76230 + -12.7  -5.24531   GCGCAAAAATGAAAA             GGGTGGC CCGG GCCACCC              TTTTTTGTGCCCGCT 100 71
        dsbA NONE
LOY33_RS00385 NONE
LOY33_RS00390 NONE
LOY33_RS00395   80636 ..   80653 +  -3.3  -2.77899   CCAGCGCTGAGCGGT             ACC-GCCC AAC GGGCAGGC             TGATTCGTCCGGCAG  41 31
LOY33_RS00400   82459 ..   82487 +  -4.3  -4.15044   TGCACGATCTCCTTG        CACAGTGCCAGGC CCA GCCCGGCACCGCC        TTTCTTGCGCCCAAC  62 159
LOY33_RS00415 NONE
LOY33_RS00420 NONE
LOY33_RS00425 NONE
LOY33_RS00430   87926 ..   87954 +  -9.6  -2.64651   CAGGGCAGCCCCCGG        TCAGACTTGTGC ACCCG GCGCAAGCCTGA        TGCATTTCCCCGCTT  60 262
        gltP   89775 ..   89792 + -12.7  -5.10461   GCCTGAAACACAAGA             GCCCCGA CCCG TCGGGGC              TTTTTGTTGCCTGCC 100 51
LOY33_RS00440   91489 ..   91532 +  -6.5  -3.38272   AGGCGTCGAGCATGC GGTTGCGCAGCAGTGCCGGC ACCGG GTCGGCCCAGC-GTGCGCCC TTGTAGCTGCTGATC  55 333
LOY33_RS00490  102182 ..  102216 +  -9.9  -2.57132   CTGGCTCAGTTGCTG    GCCC-ACCAGCCCGGC ATTG GCTGCGCTGGCAGGGC     GTTGTACGGGCGGGC  57 221
LOY33_RS00570  121392 ..  121409 +  -2.5  -2.97747   TTCTATTAATAAGGA             GCCAGCC CATG GGCGCGC              TATCTCATCTGCGGG  40 32
LOY33_RS00575  122642 ..  122694 +  -3.3  -3.92267   TCTCCTATCTATATA GAGGGTGGCTAGGGCTGATTTGATA AAG TTTCAAATTAGCCCTTGACGCACGA TTTAATCTCTCTATA  55 47
LOY33_RS00580  124766 ..  124776 +  -5.4  -3.20432   TGAAGAAGACGATTA                 GGTT AGC AACC                 TTCGATTGGGTCTGT  51 92
LOY33_RS00585 NONE
LOY33_RS00590  124966 ..  125006 + -10.7  -3.88559   TGCTAGTTTGTCAAA  GCTTAGAAATGAATATTCG CAT CGAATATTGATTTCTGAAC  TTTATCAGAATCGTT  77 48
LOY33_RS00595  128179 ..  128192 +  -5.3  -4.15222   TGTCTGAACAAGACC               TTCTG GCAA CAGAA                TTTCTTGACGACCAT  66 147
         rrf  128321 ..  128354 + -20.5  -3.59979   TCAAGATTAAATTCC     GAAACCCCTATCTGC ATCT GCAGGTAGGGGTTTC      TTTAGAGTAGAAGCA 100 35
         rrf  128543 ..  128577 + -23.8   -3.6422   GTCAAGATTCAATTC     CAGAACCCCTGTCTGC GTT GCAGACAGGGGTTTTG     TCTTTTCAGGGGCTA 100 34
LOY33_RS00635 NONE
LOY33_RS00640  137622 ..  137632 +  -4.6  -3.61398   GCCCCGGCCCTGGGC                 GCCG TAG TGGC                 TTCTTCGCCGGCCAC  53 19
LOY33_RS00650  139064 ..  139078 +    -7  -3.31248   TACCGCACCACCATC               CAGGGC GAC GCCCCG               TTCTGACCCGTCTTC  56 5
LOY33_RS00655 NONE
LOY33_RS00660 NONE
LOY33_RS00665 NONE
LOY33_RS00670  142815 ..  142825 +  -8.2  -3.14211   CATTGCCGCTATTGA                 CGCC CGG GGCG                 TTGATCGAAGAACAT  57 60
LOY33_RS00675 NONE
LOY33_RS00680 NONE
LOY33_RS00685 NONE
LOY33_RS00690 NONE
LOY33_RS00695  147885 ..  147902 +  -6.9  -3.06696   TCCTGGCGCTGGGCG             GCGGCTG GTAG CAACCGC              TATCTTGCAGGGCCA  54 15
LOY33_RS00700  148425 ..  148448 +    -3  -3.29471   CAAATAAGCGCTGAG          CGGCACCTGT ACCT GCAGTTGGCG           TTGCTATGCTCAGAA  45 34
LOY33_RS00705  149488 ..  149526 +  -5.3  -5.39905   CATCAGCGCCTCGAG  CACCGTCTGGTGCG-ACC TGAT GGTGTGTACCGCATGGTG   TTTTTCTTCTTTGGT  95 389
LOY33_RS00720 NONE
LOY33_RS00725  154030 ..  154060 +  -8.8  -3.33162   GGCGGCGCTCGATCT       GGTGATCGCCGCAG AAG CAGCGGCTGGCACC       TTGTGAGGTCGCATC  64 142
LOY33_RS00730 NONE
LOY33_RS00735 NONE
LOY33_RS00740 NONE
LOY33_RS00745 NONE
LOY33_RS00750  167025 ..  167038 +  -8.1  -3.18264   AGACTCTCCAGCGCC               CCGCA CCTG TGCGG                TTGATCGATCAAGCG  59 113
LOY33_RS00755  168010 ..  168031 + -13.7   -4.4767   GCGCCCATGAAAAAA           GGCCCGGGT TTTC ACCTGGGCC            TTTTGTCGTAGATGG 100 61
        gabD  169848 ..  169882 + -15.7  -5.02074   GTAAGGCTTTACCTC    TGCCAGCGGGGC-GCG AGAG CGCCGTCCCGCTGGCC     TTTTTTACACCGTGA 100 48
        gabT  171310 ..  171323 +  -9.5  -5.75342   CGCGATAGGAAAAAA               CCCGC CTCG GCGGG                TTTTTTTTCGCCCAA 100 47
LOY33_RS00775  173108 ..  173139 +  -6.4  -4.10657   CGATGTCCAGCAGCA      GGAACGCCATCGGC GCCT GCTCCTGGCGTGCC       TTTTCGAAGGTGTGG  66 506
LOY33_RS00790  177216 ..  177238 +    -5   -3.0395   TTAGTTATATAAAAA           TTCTTAAATA GTA TTTTTAAGAA           TATTCCACCCTCTCT  47 146
        oscA NONE
LOY33_RS00800  178611 ..  178630 + -11.4  -3.21912   CAGTAGCCAGCATGG            GCCCGGGA TTCG TCTCGGGC             TTCGTGCGTTAAACC  71 68
        cysT  179472 ..  179500 +  -2.3  -3.16071   CGCATCGAAACCCCG        TGAAGGAGGCCTG ACC CATGTCTGCATCA        TCTGTTGGTGTGGCC  41 23
        cysW NONE
LOY33_RS00815  181659 ..  181672 +  -3.7  -3.14051   CATCGCCCAGGTCGT               GCCGC TCCT GCGGG                TCTTCCTGCAGGTCG  45 330
LOY33_RS00830  186585 ..  186595 +  -3.2   -3.3341   CCCTGGGCGTGACCG                 GTCG CTA TGAC                 TTCTGAGGGGTTTTT  47 9
LOY33_RS00835 NONE
LOY33_RS00840 NONE
LOY33_RS00845  188841 ..  188869 + -16.7  -5.61596   AGGGCAACGCATTCG        GGGGCCGTATCCT GGC AGGGGACGGCCCC        TTTTTTTATGCCCGT 100 57
LOY33_RS00850  189605 ..  189632 +    -9  -3.98256   GGAACAGCACGCACT        GCGTCGCGCCTG ACCC CGGGCGCTACCC         TCTTTTTCATCAAGA  75 13
LOY33_RS00855  190677 ..  190687 +  -3.2  -3.81146   TGCAGATGCGAATGA                 GGTG GAT TACC                 TTCTTGCTTCGCAAG  55 77
LOY33_RS00860  191450 ..  191481 +  -7.2  -3.38699   GCATTGTCTGTTGCG      GCGCCGGATGCACCT GGC AGGC-CAGCCGGTGC      TCTCTTCTTTATCAG  58 48
LOY33_RS00865  192455 ..  192480 + -16.9  -5.81412   CCGCACGATGCAAAA         CGCCGACTCCGG TTA CCGG-GTCGGCG         TTTTTTTTGAATGGG 100 56
LOY33_RS00870 NONE
LOY33_RS00875 NONE
LOY33_RS00880 NONE
LOY33_RS00885  195913 ..  195936 + -10.2  -3.48276   GCGGGCTTGACCCGC          GAC-GGGCCGC CCC GCGGCCCCGCC          TTCTCTCCGGCCACC  71 113
LOY33_RS00895 NONE
LOY33_RS00900 NONE
LOY33_RS00905  201760 ..  201782 +  -4.1  -3.57792   CTGGGCGTACTGCAG          TTGCTCGACC ATCA GG-CGGGCGA           TTTGGAAGTCGCTGA  51 410
LOY33_RS00970  214422 ..  214442 +  -3.2  -4.57569   AGCATGATGATGGGA            CGCAGAAG TAGAT CTTCAGTG            TTTTTGAAGGCCTCA  69 15
        betT  216693 ..  216712 +   -15  -2.71924   CCTTCGCCGGCAAGG            CCGGCTCC TACA GGAGCCGG             ATTTGCCGGCGAATG  83 52
LOY33_RS01000  222140 ..  222164 +  -9.2  -5.75342   AAGAATCGAGAACAG          CCCGCTCAGT CTTGC GCTGCGCGGG          TTTTTTTTGCGCACA 100 39
LOY33_RS01005  222958 ..  222975 + -12.7  -5.71712   CAGCAGGGCATTTCG             GGGCCGT TTCG ACGGCCC              TTTTTTTATGTCCGC 100 58
        ssuE  223887 ..  223901 +    -7  -3.11281   CCACAGCAAAAAGGA               GAGCGC TAT GCGCAC               TGTCGTTTTGCGTCG  54 116
LOY33_RS01015  224916 ..  224930 +  -2.8  -4.64846   CTTAGGAGACAACTC               CAATGA GCC TCAATG               TTTTCTGGTTTCTGC  69 82
        ssuD  226067 ..  226088 +    -3  -2.57985   GCGGCCAAGGCGTGA           GGATCG AAGCATGAAA CGATCC            TCCATTCCCTTGTCG  40 26
        ssuC NONE
        ssuB NONE
LOY33_RS01035  227983 ..  228008 +  -2.4  -3.53012   ACCTGTAGGAGCCGG         CCTTGCCGGC GAAAGG GCCGTCAGCG          TTTGGGCAGAAAGGG  47 84
        ompR  234082 ..  234105 +   -11  -4.70659   GCAGGTCAGCATAGG          CAGGGCG-CCC CTC GGGTTGCCCTG          TTTTTGCCTGTGCCG  93 55
LOY33_RS01065  235783 ..  235803 + -10.3  -3.14344   AGGTTGGAGCGGAAC            TCGCCGGGC TTG GCCTGGCGC            TTCATCGAGGCGATC  62 318
LOY33_RS01080 NONE
        hslO  239268 ..  239285 +  -2.6  -2.93869   CGTTCTGACAGGAGG             GCCCTA CTTTTT TTGGGC              GTTTCTGGCATAATC  40 87
LOY33_RS01095  240946 ..  240977 + -17.4  -3.65313   GCTGCTCGCCAGCTG      AGAAAAAGCCGCCC GAAT GGGCGGCTTTTTCG       TTTGGGCTGTGATTC 100 44
LOY33_RS01110  242304 ..  242319 +  -6.1  -3.04144   TGCATGATCTGCGAG              CGGTG CGCCTC CACCG               TCTTCACGCTCAGGC  49 129
        lysM  256990 ..  257022 +    -4  -3.71917   CCTGCAGAAAGGTGT     CGGC-GTCC-GGGCGC AGC GCGATCAGGTCGGCCG     TTTCCAGTTTCAGCT  54 480
        nudE NONE
        cysQ  258753 ..  258777 + -12.1  -3.68886   CGGTGTAGTACGTAC          TGCCCGCCG AACTGCA CGGCGGGCG          TTTCACTGCCTTCGT  81 33
LOY33_RS01255  272375 ..  272391 +  -7.3  -3.54447   GTGGTTTAATTATTT              TTGGCTT TTA AAGCCGA              TATTTATCGGCTATA  60 149
        aguB NONE
        aguA  274457 ..  274473 + -13.7  -5.81412   GGCCTGGCAAATCAA              GCCCGTC ATC GACGGGC              TTTTTTTTGCCTGCG 100 45
LOY33_RS01270  274831 ..  274856 + -18.3  -5.24531   CCGCTGAACTGGAAA         GGGCGCCACCG ATTG CGGTGGTGCCC          TTTTTTGTGGAGGCT 100 34
LOY33_RS01280  278742 ..  278773 + -23.2  -4.11216   GATCGATTCGACCTT      CAAACAACCCCGGC CTAG GCCGGGGTTGTTTG       TTTTCGGCGTACCGC 100 39
LOY33_RS01295 NONE
LOY33_RS01300  284276 ..  284290 +  -2.8  -3.72576   CGCTCTCGTAGCCGC               GCGA GTTGCCG TCGC               TTTCGTAGGCCAGGC  53 285
LOY33_RS01315  286903 ..  286916 +  -9.5  -3.21276   GCAGTAGAGGCCGCG               CCGGC AAGG GCCGG                TCTTGTGGGGGCACC  66 34
LOY33_RS01335  290978 ..  291002 +  -5.6  -3.30635   GCGTAGAGGAAGCGA          CAGGGGCCGA CCTGT TCAACCCCTG          TTGTGACAGACTTTC  51 35
LOY33_RS01340  291494 ..  291526 +   -15  -3.83205   ATTTCATTGTTCGGG     CGAATACCC-GGCGT GGGT GCGCCTGGGTATTCG      TTTCATGTCAGGGCT 100 129
LOY33_RS01350  293291 ..  293311 +  -5.4  -3.36878   GTTGGCTGACCTTGA           GCGT-GCGC TCGA GCGCCATGC            TTGTGGATAACTGAA  53 276
LOY33_RS01415 NONE
        mdtI  305649 ..  305668 +  -7.1  -4.59853   AAATGACCAGCTGTC            GCCAGCCC TTGTC GGGC-GGC            TTTTTCAGCGATTCA  79 179
LOY33_RS01480  317014 ..  317024 +  -5.4  -2.94416   GCGGGTCAAGCCCGC                 TCCT ACA AGGA                 TCTCTGCTGACCGTG  48 48
        hisB  317759 ..  317784 +  -3.3  -2.59564   ATGCCGTCGACCAAG         GGCTGCCTGT AATGCAG AC-GGTAGCC         GTTATCGACTACGGC  40 14
        hisH NONE
LOY33_RS01495  318650 ..  318682 +  -2.7  -3.35597   TGAAAGCGACTTGTG     GT-CGCTCGAGAAG AACTGA CTTCCCGAGCTCAC      TGTTTACCGAATAGA  46 7
        hisA NONE
        hisF  320295 ..  320307 +  -4.1  -3.07043   GAGCCGGCCTTGCCG                GCGAA GCA TTTGC                TGTTAAGGTAATGCA  45 92
LOY33_RS01510  321114 ..  321133 +  -4.2  -2.81464   TAACTATGTAGTGCC            GCGGCCATG CAC CG-GGCTGC            TGTGATGGATCGTCG  43 46
LOY33_RS01515  326291 ..  326311 +  -8.1  -3.63515   GGCATAGGGCACCTT            GGCCAGGGC CGC GCCCAGGCG            TTGTTCCAGCTCCGG  63 487
LOY33_RS01540 NONE
        grxC  331915 ..  331933 +    -3  -2.80816   CTGAATTCCCTACAA             GACCCTGC AAA GAAGGATC             TGTCATGACTGAAGA  41 37
        secB  332448 ..  332463 + -11.8   -5.1675   TGCGGTACGTTGAAA              GCGCCC TTCG GGGCGC               TTTTTTCATGCCTCA 100 47
LOY33_RS01560  333748 ..  333765 + -10.5  -2.71144   AGCACCGCTGCATCG             CGCCGCC GCCC GGCGGTG              TGCTTGAGCGCCGTC  57 406
        thiI  339725 ..  339743 +  -5.2  -2.68823   TGTGCGCGTTTATCG             TCCGACAT AAG ATGCCGGG             GTTGTATGGCGGCAG  46 16
        typA  341700 ..  341737 + -20.7  -3.86015   TTAGCTCAGGCTGAA   TGAAAACGCCCCCGGTC GAAA GGCCGGGGGCGTTTTTG    TTTGTGCAAGGCCTG 100 42
LOY33_RS01595  344905 ..  344939 + -12.2  -2.87468   GGAGTAGGCGCCTGG    CATCGGGCCCGGGGG CGTGAA CCTTCGGGCC-GATG     TGTCGTCTGATCGGG  71 34
LOY33_RS01600 NONE
LOY33_RS01605  346665 ..  346723 + -10.6  -2.95204   CTGAACCCAATCGCG ----GGTCAAGCCCGCTCCCACTAGGAC TATCGCT GTCCTTGTGGGAGCGGGCTTGACCCGCG ATTGTTTCACCCTAG  64 42
LOY33_RS01615  349093 ..  349123 + -11.9  -2.74701   GGTGCTGATGTACTC      GGGGCAGG-GTCTC AAAT GAAACGCCTGCCCC       TGCTGTTGAGCCTGT  70 7
LOY33_RS01620  349757 ..  349767 +  -8.2  -3.59979   CCTTGCCGGCGAAGG                 CCGC GCT GCGG                 TTTGAGATCAGCCCA  62 99
        hutC NONE
LOY33_RS01635  352663 ..  352684 +  -4.5  -3.27129   TGTTTTTTGGTTGCC           TGTACTTGT ACAT ACAAGTAAA            TATATGTTTGTATTG  49 126
        hutU  354460 ..  354471 +  -7.2  -3.53012   ACTGAATTCATGACG                GGCG TGAA CGCC                 TTTCGAGACGGAGCA  60 58
        hutH  356057 ..  356086 + -19.3  -4.13767   GCAGGCCAGCCGTCT       GCCGCGCGAACCC TGGC GGGTTCGCGCTGC        TTTTCGCCTACAAAA 100 58
LOY33_RS01650 NONE
        hutI NONE
        hutG  359655 ..  359667 +  -3.3  -3.74749   CCGAACACAGGTACA                TGCTC AAA GCGCA                TTTCGGGTTTATGAT  52 132
         pip NONE
         dtd  361231 ..  361252 + -13.7  -4.36931   TAATCGCGCGAAATG           TGGGCCTGC GTTC GCAGGCCCG            TTTTACTCTGACTTG  95 131
LOY33_RS01675 NONE
        mdoH  365694 ..  365734 + -13.4  -3.54307   CCCTTCGCCAGCAAC GCTGGCTCCTACAG-GTCA TCCG TGCCGTTGTAGGAGCCGGC  TTTGCCGGCGATGTT  83 50
LOY33_RS01685  366677 ..  366697 +   -14  -3.36823   CGGTTCGAAACCCGA            CGCGCAGG CTGGC CCTGCGCG            TTCGCTTTTACGGAA  83 58
LOY33_RS01690 NONE
LOY33_RS01695  368760 ..  368779 +  -9.2  -2.62263   GCTCAGTTCGACGCT            GTCGCGGC TCAG GTCGCGGC             TGCTGTCGAGCAGGT  54 375
LOY33_RS01760  381156 ..  381192 +  -8.7  -3.05384   CGCAGGTTCACTGCA   GGCCCTGTGCGCGCGGG CTTGA CCCGCGA-CA-GGGGCC   TTCACTGCACAGCAA  60 68
LOY33_RS01765 NONE
LOY33_RS01770  382554 ..  382575 + -14.4   -4.9792   TAGCTGTACAGAAAA           CGCCCGGC CTGTGT GCCGGGCG            TTTTTATGTGGGGTG 100 48
        pilG  397841 ..  397871 + -14.7  -2.75825   GAACAACCCGCACCC       TGACGCTGCCGCC CTCCT GGCTGCGGCGTCA       TGCCTTTATTGGGGA  80 23
        pilH NONE
LOY33_RS01855 NONE
LOY33_RS01860 NONE
LOY33_RS01865 NONE
LOY33_RS01870 NONE
LOY33_RS01875  407481 ..  407500 +  -9.2  -3.64703   CTGCTGCGCCACCGC            CAGCGCCA CCAC TGGCGCGG             TTTCGGTACGCAGCA  68 128
LOY33_RS01890  411790 ..  411803 +  -2.3  -3.93556   TCTCGATCGTTCAAA               GCGAA ATTT TCCGC                TTTAATTCGATAGAT  53 199
LOY33_RS01895 NONE
LOY33_RS01900  413047 ..  413066 + -16.4  -4.96848   GCCTGTAAACAAGAA            CGCCGCCC CTAG GGGCGGCG             TTTTTGTGTGCGCAG 100 48
LOY33_RS01940  422102 ..  422119 +  -9.1  -3.28712   AGGTGAGCACGCGGA             TGGTGCC GCGC GGCACCG              TTCTCCAGCGGCGCA  61 191
LOY33_RS01950 NONE
LOY33_RS01955  425031 ..  425057 +  -6.4  -3.41051   TGCTCGACCAGCCAG         CGGCCCACCG GGCGATA CGGGTGGCCG         TTCTGGTCGGCATAG  55 487
LOY33_RS01965  426705 ..  426719 +  -3.4  -3.71848   CTTCTTGGCAGCGCA               GCCGGT CAG GCCGGG               TTGTTCCTCGGCAGC  53 427
         tkt  433204 ..  433217 +  -2.4  -3.06183   GGTTCCTGCAGGTTG               CAGA TAACAT TCTG                TTCCGTGAGCATCCC  41 147
         epd NONE
LOY33_RS02000 NONE
LOY33_RS02005  435707 ..  435753 +  -6.6  -3.29381   GAGGAACACCAGCGC CAGGCC-CCGGGTTGCCCTTGA TCGGT TCGAGG-CAACCTGTTGGCCGG TTCGTGGTCTTCTAG  54 5
LOY33_RS02010  436108 ..  436135 +  -6.8  -2.75064   CAAGGCACCGTGACT        GGCCGGGCCGAC CGCT GTCGGCCCACAC         TACTTGAATAGCAAC  51 28
         fba  437293 ..  437308 + -10.4  -5.61596   TGGTTGTACGAAAAA              CCCGCA GCGA TGCGGG               TTTTTTTGTGCCCGT 100 48
LOY33_RS02025 NONE
LOY33_RS02030  440956 ..  440991 +  -3.8  -3.34013   CTGCTCCACCACGAA    CACCTCGATGCGCAGC GTCA GCAGCGCGTACAGCTG     TTGCTTGCCAAGGTC  47 462
LOY33_RS02040  442007 ..  442030 + -10.2  -2.93901   CCGGTTGCTCAAGGA          CTACGGCCTG TAGT CAGGCCGGGG           TGTCCTTGATCAGGT  64 13
        putP  459228 ..  459268 + -21.9  -3.30771   CTGCATCATGCTGCC  CGGCAACGGCCCGGCCTCT TCT GGAGGTCGGGCCGTTGTCA  TTCTGGCGGCTGTCA 100 46
        rlmJ  460201 ..  460259 +  -2.7  -2.52464   TGTTGGCCTATCGCG -----GGTCAAGCCCGCTCCCACAGAGGCA ATGA TGTCCTTGTGGGAGCGGGCTTGACCCGCGA TGGGTTCCACGCCAG  38 54
LOY33_RS02095 NONE
LOY33_RS02100 NONE
LOY33_RS02105 NONE
LOY33_RS02110 NONE
LOY33_RS02115  466514 ..  466526 +  -6.2  -2.59743   CTGCGCAACGCGGTA                GGCC GTTAA GGCC                GTTCATCTGTCACTT  48 17
LOY33_RS02120 NONE
LOY33_RS02125  468485 ..  468506 + -14.5  -4.41348   GCGTCTGTGATCCAG           TCGACCACC TTCG GGTGGTCGA            TTTGTTTCAGGCCAG 100 31
        msbA  471079 ..  471101 +   -17  -3.29043   ACCTGAGTCACCCTG           CCAGGGCGCG TTC TGCGCCCTGG           TTGTCACAGCAGGTT  90 35
        hldE  472675 ..  472699 + -13.5  -4.35926   AAAGCCAGCCCCAAC          AGCTGGCGGGC CTT GCCCGTCAGCC          TTTTAAGTTTCGAGT 100 87
LOY33_RS02165 NONE
        waaA  478682 ..  478733 + -12.3  -4.08216   GATCGACTGCTTGCG CGCCTGCA-CCTGCTCTACGTCGGT GTTC ACCG-CGCGGTGCAGGTTGCGGGTG TTTTCCACCACCTGG  83 413
        thiC NONE
        cytX  483616 ..  483628 +  -4.8  -3.62046   GACGTGCGGTGACTT                CTGG AATGG CCAG                TTCTTCACGAACTCG  52 150
LOY33_RS02195 NONE
LOY33_RS02200  485469 ..  485489 +  -2.5  -2.52676   GTGACCGGTGTCGTG           GGC-GCGG GGTTTG CCGTTGCC            TGCATTCCCACCATA  38 45
        cpdA  486457 ..  486474 +  -5.5  -3.06183   ACTGCGCGTCTTTTG             TGCTCGT TGCG ACGGGCG              TTGCATGGGCATCGG  49 132
LOY33_RS02210 NONE
        parE  489030 ..  489043 +  -3.1  -3.18912   TCCAAAGGCAACCTG               GCCGAG GTA CT-GGC               TTGATCGCTCGGTGC  45 8
LOY33_RS02220 NONE
LOY33_RS02225 NONE
        parC  492928 ..  492942 +  -2.1   -3.2056   TGGTGCCAGCGTAGC               TGCGT GCCCG ACGTA               TTCATGAGTATCACT  44 133
LOY33_RS02235  493757 ..  493789 + -25.1  -4.57073   TAGGCCGATAGGCCT      CAAAACGCCCGATGC ACC GCATCGGGCGTTTTG      TTTTTCAGGGCCATA 100 79
        serB  498077 ..  498094 + -12.7  -5.10461   GCCTGGCACAAAAAA             GCCCGCA TCGC TGCGGGC              TTTTTGTTGGGTCAG 100 160
        motA NONE
        motB  503386 ..  503424 + -20.5  -2.91681   AGTGAGCCGGCAGCC  G-ACAACGCCCGCATGGA GTGA TCCGTGCGGGCGTTGTGC   TGTGTGGGGTTCGGC 100 36
LOY33_RS02285  505123 ..  505165 +  -7.7  -2.79183   GGCGAGTCGATCAGC TCACCGCCACC-CG-GGAAGT GGT ACAGCCGCGCGGTGGTGGTGG TGTGCTGGCCCTGGC  51 267
         orn  506583 ..  506593 +  -2.4   -4.2828   GCGCCAACAATCGTT                 GGCG CGC CCCC                 TTTTGGTGCCTGGGG  62 49
LOY33_RS02300  507424 ..  507450 +  -6.4  -2.78384   CGACGGATACTCCCG         CCGCGCCTGGAG CGC CTCCAGCACCGG         TATGGTCGAGGGCGC  47 185
LOY33_RS02310 NONE
        tsaE NONE
LOY33_RS02320 NONE
        mutL NONE
        miaA  514144 ..  514159 +  -2.4  -2.93149   TACTCTTGGGGGTGG              GGCGGC CTGA GCCATC               ATATTTCTTTGATTT  40 59
         hfq  514460 ..  514472 +  -3.3  -3.15458   CGCTGAGCCAGGTAA                CGCCT GAT AGGAG                TCTGCTTTGTTCTTT  43 19
        hflX  515833 ..  515851 + -13.8  -4.14397   TCTGTAGCATTGGAC             GGCGCGCC GTG GGCGCGTC             TTTGCTTTATCAGAT  95 48
        hflK NONE
        hflC  517988 ..  518004 + -13.7   -5.1287   GTGTATGATGCGGCA              GCCGGGA AAT TCCCGGC              TTTTTTGCGTCTGCA 100 101
LOY33_RS02355  519381 ..  519408 +  -3.2  -3.54424   GCTGGCCATTTGAGA        TTCCACGCCGGC ACGA GCCGGCGCCAAG         TTTGCGCGAATGAGG  49 28
LOY33_RS02360  520744 ..  520770 + -19.4  -5.75945   GTAGGCAGTAAAGAA         CGCCGCTGTCCC TCC GGGCCAGCGGCG         TTTTTTTTGGCCAGT 100 47
LOY33_RS02365  523212 ..  523238 +   -15  -3.05521   CAGAACGCCTTGAAC         GGCGTCGCGCCC AGG GTGCGCGCCGCC         TCTTCCAGCTGTGGT  74 381
         rnr NONE
        rlmB  529778 ..  529789 +  -7.2  -3.52192   CCAATTGCCTTGCGT                GCGC CCCG GCGC                 TTCTCTACAATTGCG  60 148
        rpsF NONE
        rpsR NONE
LOY33_RS02410 NONE
        rplI  532039 ..  532080 + -12.3  -4.57073   GGGTGCCAGCCGGTT AACATCGGGCACGATCCTGC ATT GCAGG-TCGTGCCCTTTGTC TTTTTCAACACCCTG 100 65
        dnaB  533513 ..  533553 +  -6.1  -4.06505   CGACGAATAAGGTGC  CGATGGCCAATTCCGACTT CTG ACGTCGGAATTGGTCAAAA  TTTGTGCTATATTCC  66 31
LOY33_RS02425  536006 ..  536032 +  -2.1  -2.83271   GAGCGGGCTTGACCC         GCGATGAGGCC CGCAA GGCCACATCCA         TCCTTCTCCCCATCC  39 119
LOY33_RS02430 NONE
LOY33_RS02435  539609 ..  539625 +  -2.1  -2.61116   ATCGTCCCTGAATGG              CGCATGA TGG TCCCGCG              GATTTTGTGTATACA  38 168
         azu  540287 ..  540297 +  -4.6  -3.53091   AGGAGCCGGCCTTGC                 CGGC GAA GTCG                 TTTCAAGGGGCGAAT  53 104
LOY33_RS02455  543958 ..  543973 + -11.8  -4.62783   CCGGGCACTCGCTGC              CCGGGG CGCG CCCCGG               TTTTTGCCGTACCTG 100 55
LOY33_RS02460 NONE
        livM NONE
LOY33_RS02470 NONE
LOY33_RS02475  547896 ..  547911 + -11.8  -5.96219   GAACATTAAAGAAGA              CCCCGG CTTG CCGGGG               TTTTTTTTGTGCGTA 100 45
LOY33_RS02480  549464 ..  549496 +  -9.8  -3.14132   CACTTTCGCCGGCAA      GGCCGGCTCCTGCA ACTCA TGTAGGAGCCAGCG      TTGCTGGCGAAGGCA  64 44
LOY33_RS02500  554205 ..  554234 +  -3.5  -3.91352   AGCTGTCGATGGCGA       T-GCGCTCGGCGAC CAG GTCTTCGAGCACCA       TTTCCTTGAGGGTCT  59 248
LOY33_RS02515  556384 ..  556412 +  -6.6  -4.57073   CCTGCAGGTACAGCA        GTTGCAGCGGCG GCAGG CGCAGTTGCCAC        TTTTTCAGCAGGGTG  76 356
LOY33_RS02525 NONE
LOY33_RS02530  558429 ..  558447 +  -6.6  -3.29511   GTTGCGGGTGCTGAA             CGCCACCT GCA GGGTGCCG             TTATCGACCAGTCGG  53 271
LOY33_RS02545  560864 ..  560907 + -14.6  -4.06678   GAGCTGGTGTAAGGC CGA-CGGGCCTCTTCGCCAGC CTT GCTGGCGAAGAGGCCAACTCA TTTCTGTGGATAAGT 100 29
        cbpA NONE
LOY33_RS02570  565518 ..  565551 +  -5.2  -3.02043   AAGCCCGCTCCCACC     GATACGCCGTTGGC CTCCAA GCCAGCGCTGTACC      TGTTAGAGCGGGCTT  49 59
LOY33_RS02605  572569 ..  572589 +  -4.5  -2.80816   GCACCGGCACACGCG            CCTGGCGCT TGC GGCGCACGG            TCTGGTAGGTCACGG  44 57
        cobG NONE
LOY33_RS02675 NONE
LOY33_RS02680 NONE
        cobJ  590497 ..  590520 +   -16  -5.14563   TCGTAGGGAAAGAAA          GGTGCGCCTG GAAA CGGGCGCACC           TTTTTTCATGCAGGC 100 51
LOY33_RS02690  591397 ..  591426 + -13.5  -2.78596   GAAGAAGTAATTCTA       CCGGCACCGGTGT CAAG GCGCCGGTGCCGC        TATCCTCAAGGAGTC  76 31
LOY33_RS02695 NONE
LOY33_RS02700  592969 ..  593005 +  -4.9  -3.41051   CACCAGGCCAACGGT    GAAGCTGGCCAGGGCGA TAC TCACGATGGCCAGCAGC    TTGTCGTCCCAGTGC  51 182
LOY33_RS02765  609837 ..  609859 + -16.3  -4.62069   GCAACACAAAAAAAA           GACCCCGGC ACCAG GCCGGGGTC           TTTTTCACATCACAC 100 120
LOY33_RS02800  619432 ..  619459 +  -4.8  -3.01712   CGCAGTGATCGACCT        GCGCCAGCTGCTG TCC CAG-GGCTGATGC        TGTTCAGCCAGAGCG  46 1
LOY33_RS02805  620127 ..  620158 +  -9.4  -4.91109   CAGAGTGGGGCTTCG      C-GGTCGGTACCTCG CCC CGGGGCATCGACCAG      TTTTTGTCCTCAACG 100 160
LOY33_RS02810  620562 ..  620572 +  -2.4  -4.72272   TCCGGCGGCTGATGG                 CCGC TGC GAGG                 TTTTTCCTGCAGCAC  70 29
        speA  622677 ..  622699 +  -5.4  -2.70932   ATACCCTGTAGGAGC           CGGCCTTGCC GGC GAAGAGGCCG           TCATTCACGCCACAA  47 81
LOY33_RS02825  629606 ..  629617 +  -3.6  -2.76046   TCACCCACGCAAAAA                GGTG TCCG CGCC                 TGATGTTCAGCTTAG  43 490
        pbpC  631991 ..  632026 + -12.7  -3.61178   AGATGGATATAACGC    GAAAGGGGAAGG-GCT GCCAA AGCACCTTCCCCTTGC    TTTCAAGTGCCTGAA  81 54
LOY33_RS02840  633903 ..  633932 + -12.9  -4.60487   CCTACGCTTGAGGCT       GACGAGGGAACCG TCTT TGGTTCCCTCGTA        TTTTTCAGGATCATG 100 81
LOY33_RS02845  635697 ..  635722 + -11.1  -3.14881   GGAGCGGGCTTGACC         CGCGATGGCCGC GTG GCGGCCAG-GCG         TTACTGAACCAGTTG  69 92
        cpaB NONE
LOY33_RS02865 NONE
LOY33_RS02870 NONE
LOY33_RS02875  641366 ..  641385 + -10.6  -2.97245   TCAACGATGCGGAGC            CCGGGCCG TGAG CGGCGCGG             TGTGGTTGTGGCTGG  64 15
LOY33_RS02880 NONE
LOY33_RS02885 NONE
LOY33_RS02890 NONE
LOY33_RS02895  644116 ..  644133 + -12.7  -3.36581   CATGCCCAAGAAAAA             GCCCAGC GTCG GCTGGGC              TTCATTCACGATTTG  79 43
LOY33_RS02920 NONE
LOY33_RS02925  650273 ..  650285 +  -5.5  -3.22298   CAGCGGATCGACCAA                CTTGC CGA GCAGG                TTCCTGATCACTGGC  51 124
LOY33_RS02975  659775 ..  659821 +  -9.4  -2.74192   ACCGCGATCATCGAG CGCTGACC-AGCGGCGCCTCCT TGGCC AGG-GGCGCCGGGCGGTTGGCG TAGTGTTCGGCCATG  61 20
LOY33_RS02985  661807 ..  661817 +  -2.4  -3.24232   CGATGGCCGGCAACC                 CGTG ATA CCCG                 TGTGTTTGGCAAAAC  44 172
LOY33_RS02990  663120 ..  663137 +  -3.3  -3.37028   CATCTTGGCGCTCAG             GCCGGTA CGTT TGGCGGC              TTGTCCGATGTTCAT  48 399
LOY33_RS03010  666445 ..  666455 +  -8.2  -2.52464   CATTCCGGTGTGCGA                 GCGC TGC GCGC                 TCGATTGCCGGCAAG  53 141
LOY33_RS03015  667765 ..  667785 +  -6.7  -3.63073   GCCGACCTGCTTGAG            CGGGTGCGG GGC CCGCAAGCG            TTGTTGCAGGGTGTC  58 27
LOY33_RS03030  670277 ..  670293 +    -8  -4.08216   CAGAAGGCCACATGG              TTGCCC AAAAC GGGCAA              TTTTGCCGGAGATAG  71 231
LOY33_RS03035  671380 ..  671392 +  -4.1  -3.66288   CACGCCACGTTCGAG                CATCT CGA GGATG                TTGTGTTCGCGCATG  54 249
LOY33_RS03045  673610 ..  673640 +   -11  -2.90075   TTGAACAGGGCCAGG       TCGGCCTGCTTGCC CAC GGCCAGCTCGCCGA       TGTCGTTGCGCCCAA  61 235
LOY33_RS03075  679643 ..  679674 +  -2.3  -4.03234   TTCGATGCGGTGGGC      GA-AGCGATCAACC AGGTC GGCTGATCCCTCTC      TTTATATAAGCAGGC  56 2
LOY33_RS03080  681237 ..  681260 + -18.2  -5.26119   AGGTCGGGCTGAAAG          GAGGGAGGCC GCAA GGCCTCCCTC           TTTTGTTTTTCAGCG 100 40
LOY33_RS03085  683395 ..  683405 +  -5.4  -3.20432   TGAAGAAGACGATTA                 GGTT AGC AACC                 TTCGATTGGGTCTGT  51 92
LOY33_RS03090 NONE
LOY33_RS03095  683595 ..  683635 + -10.7  -3.88559   TGCTAGTTTGTCAAA  GCTTAGAAATGAATATTCG CGT CGAATATTGATTTCTGAAC  TTTATCAGAATCGTT  77 48
LOY33_RS03100  686809 ..  686822 +  -5.3  -4.15222   TGTCTGAACAAGACC               TTCTG GCAA CAGAA                TTTCTTGACGACCAT  66 147
         rrf  686950 ..  686985 + -19.2  -3.51934   GTCAAGATTAAATTC    CGAAACCCCTATCTGC ATCT GCAGGTAGGGGTTTTG     TCTTTGTGGGCCGAA 100 34
        recC NONE
        recB NONE
        recD  696394 ..  696408 +  -5.6  -3.05294   TATGCTATCTTGCCC               CCACGC AAG GCATGG               TCTTAAGAGATTTCC  49 108
LOY33_RS03125 NONE
LOY33_RS03130 NONE
LOY33_RS03135  698886 ..  698912 + -13.7  -2.64794   GCTTGCGCAGGTCCT         CCCGGCAGTAC ATCCA GAACTGCCGGG         TAATCTCCACTTCCC  69 138
LOY33_RS03145 NONE
        mmsB  702297 ..  702313 +  -4.3  -2.65815   ATCGCGGGTCAAGCC              CGCTCCC ACA GGGACTG              TGCTGTACCTGTGGG  42 46
LOY33_RS03190  710286 ..  710304 +  -3.9  -4.07568   TAAGCGTTGAATTCG             TGCTTTT TGGTC AAAAGCG             TTTTGCCCGCGCGAG  60 387
LOY33_RS03200 NONE
LOY33_RS03205  711958 ..  711984 +  -2.9  -3.55761   CGCAAGCTGTCGATC        T-ACGCCTGCTG AAAA CCGCAGGCGGCA         TTTGAAAAATCCCTG  49 14
         ggt  713947 ..  713998 +  -7.7  -2.78547   GTTCAGGATGCTGCG GCTGATCTCTTCGGCCACCGCGC TCTGCT GCTCGGCCGCCGCGGCGATCTGC TGGTTCATCGACTGG  51 255
        pcaH NONE
        pcaG  718667 ..  718683 +  -2.9  -3.57144   TAGGTGACGTTGTTG              TTGGTGC CCG GTACCAC              TTTCCAGGTCAGCGC  49 360
LOY33_RS03250  722590 ..  722612 +  -9.2  -6.02345   TCAGGTAAACCAAGG           CAGTTTTGTG GAG CGCAAAGCTG           TTTTTTTTGTACTTG 100 72
LOY33_RS03255  723495 ..  723519 + -12.8  -3.14132   CCGCAAGGTAATGAA          CGCCGGCTCC CTGTA GGAGCCAGCG          TTGCTGGCGAAGGGC  76 10
LOY33_RS03265 NONE
LOY33_RS03270  727852 ..  727903 +  -4.4  -3.05384   GAGCCTCCAGTCGCC GGCAGGGCCGGCACCTG--C-GGGT TGACC ACCCTGTACAGGTGCCGGCTAAGCG TTCAATCCCCCAGGC  47 48
LOY33_RS03280  730428 ..  730438 +  -6.8  -2.75577   GGTCGACGAACACGC                 TGCC AAA GGCA                 TAGCTTTTCAGGTCG  48 352
LOY33_RS03295  733250 ..  733307 +  -5.4  -2.75064   TGGCTGGCCTCATCG CGGGTCAATCCCGCCCCCAC-AGATTC AGTGA GGCCCTTGTGGGAGCAAGCTTGACCCG TGATTGGGTGCGCGC  47 43
LOY33_RS03305 NONE
        cydB NONE
LOY33_RS03315  737582 ..  737607 + -16.1  -5.83822   CTGGGCGGGTTTACA         CCCTGCGCCGC GTGA GCTGCGCAGGG          TTTTTTTTGCCTGTC 100 64
LOY33_RS03330  740701 ..  740724 +  -5.3  -3.53343   TTCAGGGCTGCTGGT          TCTGCG-CCT TGAGC AGGTCGCGGA          TTTCGCCCAGCAGTT  55 88
        radA  742646 ..  742680 +  -7.2  -3.95786   ATTGTTTGAATAAAA     TGTAATCAATTTGCCA TGA TGGCAAATTGACGCCA     TTGTTCTGTCTCTCT  68 28
LOY33_RS03345 NONE
LOY33_RS03350 NONE
LOY33_RS03355  758624 ..  758634 +  -8.2  -2.70932   GCCAAGCATTCTGCG                 GCGC GTG GCGC                 TGATTGCCGAAAGAA  54 253
LOY33_RS03375 NONE
LOY33_RS03380  764096 ..  764127 +   -26    -2.974   CCGCGTGTGACAAAC      CTGTGGGAGCCCGG GCAG CCGGGCTCCCACAG       TCATTTCAGTGTTCA 100 54
        yjiA  765214 ..  765232 +   -16  -4.62336   CGATGCCACAAAAAA             GCCCGGCT GGG AGCCGGGC             TTTTTCACATCAGGT 100 126
        tssA NONE
        tssB NONE
        tssC NONE
        tssE  774956 ..  774966 +  -8.2  -2.85351   CAGGTCAACTGAGAC                 GCGC ACC GCGC                 TGTCGTCTCGCGAAC  54 29
        tssF NONE
        tssG NONE
        tssH NONE
LOY33_RS03435  781941 ..  781962 + -15.1  -3.16564   TTCCCTTACAACCGT           GCGCTGCCC CGGC GGGCGGCGC            TTCGTGCAATGCCCA  85 67
LOY33_RS03440 NONE
        tagH NONE
        tssJ NONE
        tssK NONE
        icmH NONE
        tssM NONE
LOY33_RS03470 NONE
LOY33_RS03475  791480 ..  791521 + -24.7  -4.75063   AAGGCCTACAGACGA GTGCGCAACTTCTTGCACA GTAC TGCGCAAGAAGTTGCGCAC  TTTTTCGGGTTTTCT 100 134
LOY33_RS03480  792199 ..  792215 +  -9.3  -3.37344   CTGGCGTACCCCGGT              CGCCGGC TAA GCCTGCG              TTAGTTCACTGCCCC  67 16
        vgrG NONE
LOY33_RS03490 NONE
LOY33_RS03495  800360 ..  800380 +  -6.9  -2.72829   ATGAGGGGGGCTTAA            TTGCGCA AGGTGTA TGCGCAA            ATTTCGGAAAGTATG  51 26
LOY33_RS03500 NONE
LOY33_RS03505  801549 ..  801573 +  -5.7  -4.27192   CTGGAGGATTGGGTC          GATTTCACGAT GGT ATCGTGAACAC          TTTTAGTGAGAGTTT  69 124
LOY33_RS03510  802333 ..  802344 +  -2.2   -3.1478   CGCAGGACAGCGGAG                TGTC CTCA GACG                 TGTTGATAACATGCT  41 215
LOY33_RS03515  802996 ..  803009 +  -6.7  -3.36452   CCCGCGTTCCCACGA               CATGC AACG GCATG                TTGATGTTCAGCCCT  56 127
LOY33_RS03520  803379 ..  803395 +  -2.1  -3.53012   GTCATCAGCTAGGCA              TTGCCCG CAA CGTGCAC              TTTCCCGCCCGGCCG  47 29
        ettA  805183 ..  805200 + -14.1  -5.81412   GGTCTTGCACTGAAA             CGGGGCC TTCG GGCCCCG              TTTTTTTTGCCTGGA 100 48
        gdhA  806861 ..  806876 +    -6  -3.14344   CAGCAGGGCCCGGCC              CAGGGG TGAC CCCCAG               TTGATCAGGCCACTG  51 124
LOY33_RS03555  813047 ..  813079 +  -7.6  -4.41114   GGCGCATGGCACATG     ACCGCTCGGCGCCGA CCGC TTGTCGCCG-GCGGA      TTTCTTCTATCCTCA  78 115
LOY33_RS03560  813536 ..  813558 +  -9.8  -4.34402   CCGGATCATCCACTG           GCCTGTGGCA GCG TGTCGCGGGC           TTTTCCTGTCACAGG  83 46
LOY33_RS03565  814133 ..  814173 + -20.6  -4.00468   CGGGGTATCACGCCT TGTCAGCCGCCCGTCCGTT GCAT AACGGACGGGCGGTTG-CG  TTTCTGGCTTGTGCT 100 45
LOY33_RS03570  814602 ..  814612 +  -2.4  -4.38154   CTTGCCCTTTTCACA                 GCGG GCG CGGC                 TTTTGTGCGCCCTGT  62 72
LOY33_RS03575  815590 ..  815621 +    -6  -4.02817   TCAGATAAGTCATGG      CTATTCTCCTTGAA AGCG TTCAATGAGAATAA       TTCTTATTATCAAAA  66 356
        rplU NONE
        rpmA  817999 ..  818032 + -14.7  -3.89822   TAATCGCGCGATCGC     TGGAAAAGCCCTGTC TCGC GACGGGGCTTTTTCG      TTTGTGGGGTGAGTC 100 38
        cgtA  819421 ..  819440 + -13.6  -4.39166   TTGCAGTACACTAAA            CGCCGCTT TTTC AAGCGGCG             TTTTGGTATCTAAAG  95 45
        proB NONE
LOY33_RS03615 NONE
LOY33_RS03635 NONE
        rimI  827475 ..  827498 +    -8  -3.16564   TACGCTCAGGTCCCA          GTCGGCCGGG TGGT CGCCGCCGAC           TTCATCGGCTGAGCG  54 135
         can  828611 ..  828644 +  -2.4  -3.89572   CTCCGGCGTCATCTG     GCGTACCGTGCGG AAAAACAGC CCGCA-GGTCTGC     TTCTTCTCCTTCACT  56 186
LOY33_RS03660 NONE
LOY33_RS03665  832297 ..  832335 +  -7.4  -2.71364   TCGTAGCCGGCGCGG  CTG-CTGCCCCTGGCCG ACTGGC CGCTCAGGCGCAGCCAG   TGCTTCCAGGCGTCG  51 238
LOY33_RS03675 NONE
LOY33_RS03680 NONE
LOY33_RS03685 NONE
LOY33_RS03690  837835 ..  837856 + -10.1  -4.81685   TCAGGCATGAAAAAA           GGGCCTACC TTTC GGTAAGCCC            TTTTTAGTACTTGGT  95 109
LOY33_RS03715  843451 ..  843489 + -25.4  -3.60627   CAAGCGCTGACAGCG   CGCCGGCCAGGCGTCGAT GCG ATTGACGCCTGGCCGGGG   TTTCACCTAGAGTGC 100 31
LOY33_RS03720  845367 ..  845394 + -16.3  -2.90075   TCGCTACGGTTCTTG        CCGGCGGCCAC CTTGCA GTGGCCGCTGG         TGTAGTTGGGCAGGC  79 489
LOY33_RS03745 NONE
LOY33_RS03750  853384 ..  853396 +  -5.5  -3.64703   CCCGGCAGCACTTCG                CCGGA CAC TTCGG                TTTCGATGCCGCGCG  57 433
        metE  862153 ..  862188 + -29.2  -3.49951   GAACAAGCCTGGCAA    CGCCGATCCTGCAGGC CATG GCCTGCAGGATCGGCG     TTGTATCAGCGTGTG 100 84
        hemA NONE
        prfA NONE
        prmC NONE
LOY33_RS03845  875492 ..  875521 +  -4.1  -3.14878   CTGCAGCGTGTGTGG       CGCCGGCCATGCGT GAA GCGCC-GGTCGGGG       TGTTCGATTCCGGCG  45 10
        murI  876399 ..  876415 +  -5.2  -3.02881   TTTAGGAAAAGGGAC              GTTTCT CATGA AGAAAC              TGCTTTGCTTGGCTG  49 133
LOY33_RS03855  876955 ..  876976 + -15.9  -5.46698   CTGCACCACGAAAAA           GGCCCTGAC TTGC GTCAGGGCC            TTTTTTCATTTTGGC 100 56
LOY33_RS03885  883184 ..  883199 +  -7.6  -2.83715   TCTGAAAAGGATGTT              GCATGA CCGA TCATGC               TCTGCTGCTGGTCAA  54 36
        hemH  884685 ..  884714 +  -6.4  -3.01712   AGTTCTTGGTCAGCA       TCACC-GCGCCGG TCACT TCGGCGTAGGTGG       TGTTGGGCGGGCCGC  49 508
LOY33_RS03905  886968 ..  886978 +  -2.4  -3.38522   CGCGAAAGGGGCGAT                 GCGG TAT CAGC                 TATTTGCGGTGCCTG  46 65
LOY33_RS03910 NONE
LOY33_RS03915  887932 ..  887945 +  -9.5   -5.1675   GCAGCCATGAAAAAA               CGCCC CGAG GGGCG                TTTTTTCATGCATCA 100 48
LOY33_RS03925  890869 ..  890896 + -17.1  -4.72986   ACGGCAAACGAAAAA        GCCCGATGCCT CGTTGC AGGCATCGGGC         TTTTTAGTGGGCGTG 100 49
LOY33_RS03935  891718 ..  891731 +  -3.8  -3.01712   TCGCATACTGCAGCA               CCAG GTACGG CTGG                TGTTCCACCGGGCAG  44 195
LOY33_RS03945 NONE
LOY33_RS03950 NONE
LOY33_RS03955  894338 ..  894353 +    -6  -3.03243   GCTCTCCAGCGCCTG              GGCCGC CTGC GCCGCC               TGTTGCACGCTGACT  49 348
LOY33_RS03965  897223 ..  897278 + -29.2  -2.71364   AATAGCGCCGTGACC TTCGCCGGCACTGCCGGCTCCTAC CTGAACCT GTAGGAGCCGGCCTTGCCGGCGAA TGCTTCACACGCTAG 100 36
LOY33_RS03985  900967 ..  900977 +  -8.2  -2.80816   ACTGAGGCGGTTGAT                 GGCC ATT GGCC                 TGTCATCCCTGAGGG  54 36
LOY33_RS03990  902878 ..  902891 +  -3.8    -3.727   GCCCGCGCAGTTGGC               GAGC GAATCA GCTC                TTTGGGTGTAGTACC  54 132
LOY33_RS03995 NONE
LOY33_RS04000  906413 ..  906433 + -15.4  -4.17296   GTGTGATCCCCAGAA            CGCCCCGG CTTGA CCGGGGCG            TTTCTGTGTGTGGCC 100 56
LOY33_RS04005  909365 ..  909404 + -13.7  -3.20723   TTGTAGCACGGCAGT  CG-GCCAAGTATGATGGC ATCGC GCCATCACGCTTGGCGCG  TTGGCTTCGTGCCGC  82 35
LOY33_RS04010 NONE
LOY33_RS04015  911995 ..  912035 +  -5.9  -3.31428   GGCCACCTGCATTTC  TTGTGTCCCGGTTCGCGCC TTC GTCGCTGACCGGGTGGCGA  TCTATTGTCTTTCGG  51 117
LOY33_RS04020  913376 ..  913386 +  -8.2  -3.61398   GTTCTGATGGAGTGA                 GCGC GAT GCGC                 TTGTTCGCCGGGAGG  62 34
LOY33_RS04025 NONE
LOY33_RS04030  914491 ..  914503 +  -3.3  -3.53012   CTGGTCCGACACGGT                GGTGC CTG GTGCC                TTTGACCAGCAAGGG  49 54
LOY33_RS04035  915837 ..  915851 +  -5.6  -4.89339   ACGGCGCGTGGTCTG               CAGGTC CTT GCCCTG               TTTTTCTGGGTGCTT  84 514
LOY33_RS04055  919272 ..  919326 + -15.2  -5.14563   CAGAAGGTCGCTAAG GCGCCCGGGCAAGTCTGTCGTGTTCTC CCAG GAGG-CA-GACGG-CTTGGCCGGGCGC TTTTTTAGTGGGCAG 100 56
LOY33_RS04060 NONE
LOY33_RS04065  921204 ..  921235 +  -9.4  -3.03124   ACGGTGCCGGTGCCT      GTTCGCAGGCGCCGC GCA GGTGCGCCT-CGAAC      TGTTCGACGATGGCC  64 71
LOY33_RS04075 NONE
        trxB  926319 ..  926347 +  -5.1  -4.45544   CCGCAGCGATCGCTT        CGGCAATCCCGCC GCT GGCGGCAATGTGG        TTTTCCTTGATCAGA  74 428
LOY33_RS04095 NONE
        ampD NONE
        ampE  930772 ..  930794 + -14.8  -3.14132   CTCACAACGTGTAAA           CGGGCTGCCG CAA CGGCGGCTCG           TTCCTACAGGGCGCC  83 41
LOY33_RS04110  932964 ..  932994 + -10.3  -3.01712   GGTCTGAGCGAGGGC       TGGGCCCTTCGCC GGCAA GGCGCAGGGCCGG       TATTACCAGCCAAAC  64 34
        ptsP NONE
        pfkB NONE
LOY33_RS04135  940958 ..  940970 +  -3.5  -4.56597   TATAAGTTGTTGATT                TTAAA AGA TTTAA                TTTTTACAGAAAAGC  69 377
LOY33_RS04145  941584 ..  941613 + -14.3  -3.34962   CGCATCGTCCGCACA       GCCCAGCAAGGTC GAAA GATCCTGCTGGGC        TTCTGGCGTCTGCAG  75 91
LOY33_RS04185  953342 ..  953359 +  -4.7  -3.57144   CGGCCTGATGCAGTT             GCTCGAC CAGC GCCGGGC              TTTCCACGTGCAGGG  52 101
        hmpA  958394 ..  958415 +  -4.3  -3.53836   CACGAATGTGCTGCA           GG-CGCCGGC TAA GCTGCCGACC           TTAATCTTCTTTTAA  51 83
LOY33_RS04215  959302 ..  959315 +  -3.7  -3.78022   AGTTGCAGGATTAAA               GGAGC TCCG GCCCC                TTTCGTGACTCTGAC  54 303
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD  963516 ..  963526 +  -3.2  -2.75562   GGCGAAGTGAGGTAA                 GACG GCA TGTC                 CTTTAAGCACTTTAT  41 31
        cyoE  964429 ..  964451 +  -9.1  -5.81032   ATGTGTTGAAAGAGA          CCCCGG-GCC GAAA GGTGCCGGGG           TTTTTTTTGCCCTTC 100 45
LOY33_RS04245  966337 ..  966382 + -17.5  -3.55622   GTCTGTGCTGACACC GCGGCATCGGTCGC-GGCCGCG CTG CGCGGCCCGCGATCGAATCCAC TTTACAGGCATTGCC  95 30
        alaC  967752 ..  967798 +  -4.2  -3.83744   TGCTCCCGTAGGAGC CGGCCTTGCCGGCGAAGGGCG CGACAC CGCCTTCCGTCGGCC-GCCCA TATTTCTTTCACTGC  57 61
LOY33_RS04255  968353 ..  968363 +  -2.4  -3.53224   GTATTAACACCATTT                 GACG TAA CGCC                 TTTGCGCAAGGGCTC  47 107
LOY33_RS04260  983567 ..  983595 +  -4.4  -3.03701   TGAAGGCGGTGGCTT        GAGCGCAGGTAC CTCAA GTACCATCGCCC        TCTGATTTGATGAGA  47 65
LOY33_RS04265 NONE
LOY33_RS04270 NONE
LOY33_RS04275 NONE
LOY33_RS04280 NONE
LOY33_RS04285 NONE
LOY33_RS04290  989349 ..  989374 +  -3.9  -2.62184   ACCGGCCGCGCCCAG         GCGCGG-GGTGA GGA TCAGCGCCGCGG         TGATGTAGGCCACCC  40 213
LOY33_RS04300 NONE
LOY33_RS04305  991073 ..  991100 + -10.4  -3.14132   CCCTTCGCGGGCAAT        GGCACGCGCTCG ATGA CAGGCGCGCGCC         TTGCTGGCGAAGGCC  66 44
LOY33_RS04320  993806 ..  993816 +  -5.4  -3.53224   GCCGATCAAATACCC                 TGAC ACC GTCA                 TTTCCCAACCCCGTA  55 23
LOY33_RS04325  994661 ..  994693 +  -6.1  -3.62096   CATCTGTGCGATCTT      GTCGCCGCCGCCCTG GGG CAGTTGGGTGGTGAC      TTTCAGGTAGTACAC  58 303
LOY33_RS04335 NONE
LOY33_RS04340 NONE
LOY33_RS04345 NONE
LOY33_RS04350 NONE
LOY33_RS04355 NONE
LOY33_RS04375 NONE
LOY33_RS04380 1004995 .. 1005012 +  -8.4  -5.14563   GGTACTGCAAGGGAA             CCGGCT CGCAGT AGCCGG              TTTTTTCATGCCCGC 100 48
LOY33_RS04385 NONE
LOY33_RS04390 NONE
LOY33_RS04395 1008513 .. 1008531 +  -5.8  -3.64703   CGTTGAATTGTGTTT             CCCGTCAG CGG CAGCCGGG             TTTCGCTGCCGCCGG  58 35
LOY33_RS04400 1009375 .. 1009400 + -21.9  -3.16683   CTTCTGAGCCCCGGT         GGCCCGCGCTG GCGA CAGCGCGGGCC          TTGGTCGAATCGCAT 100 34
LOY33_RS04405 1010518 .. 1010530 + -10.5  -3.18264   CTGCACCGGGTAGCC                CGGGC CCT GCCCG                TTACTGGCTGGCGGC  68 51
LOY33_RS04440 1017846 .. 1017869 +  -2.4  -4.66833   GGGAGGTGACATGCT          CTTGC-AACTG CAG CAGCTGGCAGG          TTTTTAACCTTGGGA  66 61
LOY33_RS04445 NONE
LOY33_RS04450 1018953 .. 1018989 +  -2.9  -3.25823   GTTCAAGCCTTTTGG   CGGGATCGGCT-GCTC AAACCA GCGCTGGTAGATCCCG    TTGATCTCCCCCGAG  46 329
LOY33_RS04470 1022479 .. 1022495 +  -7.2   -3.9777   CCCAGAGACTAAAAA              GCCCGC AGTCA GTGGGC              TTTATGGGTGTTGCG  68 72
LOY33_RS04475 1023941 .. 1023964 +   -14    -3.494   TTCTGAATAGAAAAA          GGGGTAGAAA TTTC TTTCTACCCC           TTCTCTAAGCCCTTG  83 518
        queA NONE
         tgt NONE
        yajC 1026782 .. 1026807 +   -14  -3.01712   CAGATTTTCTACAAT         CGACGGGGCGC GCAAG GCGCCCCG-CG         TCTTGAACGGGCGGC  77 45
        secD NONE
        secF 1029649 .. 1029671 + -11.3  -5.67063   TGAGCGGTACAAGAA           GGTGCGAGT ATTGA ACTCGCGCC           TTTTTTTATGCTCCA 100 59
LOY33_RS04510 1030379 .. 1030411 + -25.1  -4.57073   TAGGCCGATAGGCCT      CAAAACGCCCGATGC ACC GCATCGGGCGTTTTG      TTTTTCAGGGCCATA 100 119
        trmJ NONE
        cysE 1034227 .. 1034252 +  -8.1  -3.75665   GTCGACGCATTGACA         GAAGGGCGTGC GCTG GCGCGCCCGAC          TTTGCTACACTCTGC  66 28
        iscR 1034860 .. 1034873 +  -2.3  -3.60098   AGATTGAGACATCCG               CCGTC GAAT GACCG                TTTCGACTGCGCGAT  47 15
LOY33_RS04540 1036135 .. 1036149 +  -3.5  -2.94099   GCGCACTAAGTAGTC              GCCAGC AAGA GC-GGC               TCTCTGATGAGGAAG  42 32
        iscU NONE
        iscA NONE
        hscB 1037445 .. 1037469 +  -5.5  -2.63596   GCCTCGACGATTAAC          CCGGTGGCGCC GTT GGCGACACCCC          TGGTATCAGATAAGC  46 27
        hscA NONE
         fdx NONE
        iscX 1039940 .. 1039958 + -10.2  -4.34557   GGCAATCCCCCGGAA             CCCGCGTA TAA TTCGCGGG             TTTAATTTTTCGCTT  85 58
         ndk NONE
        rlmN NONE
        pilW NONE
LOY33_RS04590 NONE
        ispG NONE
        hisS 1045811 .. 1045824 +  -2.3  -2.83403   CGCGCAGGCGTGAAG               CGGGT CAAC AGCCG                ATTTGGTGAAAAGGA  39 28
LOY33_RS04605 NONE
        bamB 1047695 .. 1047715 + -18.3  -4.64992   CGCCGCCCGAACTCC            GGCCGCTGC ACT GCAGCGGCC            TTTGTATTTTTTGAA 100 87
         der 1049245 .. 1049277 +  -9.8  -3.53012   CCTTGCCGGCGAAAT     GGGCA-GCGCGGATC AACT GAACCGCGCTTACCC      TTTCGCCAGCAACGC  69 56
LOY33_RS04620 NONE
LOY33_RS04625 1051622 .. 1051632 +  -2.4  -3.21099   TCACCACTCGCCAGC                 CAGC CCT GCAG                 TTCCTCCTCGCACAG  42 360
LOY33_RS04640 NONE
LOY33_RS04645 NONE
LOY33_RS04650 NONE
LOY33_RS04655 1058609 .. 1058630 + -15.9  -3.83502   GGGCCCATGAAAAAA           GGCGACGGT TGCA ACCGTCGCC            TTTCGTGTGCAACTG 100 47
LOY33_RS04665 NONE
LOY33_RS04670 1061986 .. 1061996 +  -2.4  -4.38712   CATTTTCATTCGCAG                 GCGG TGG CCGA                 TTTTCTGACCCTCAG  62 93
LOY33_RS04675 1064467 .. 1064502 +  -8.8  -3.34501   ACAACGCCTTCGCTA    CGCCGATCACACAGGC CATG GCCTGCCGGACCGGCG     TTGTCAGCCTTGTCT  64 40
LOY33_RS04700 1069926 .. 1069955 + -26.5  -4.54727   TTTTCGCACACCCCA       CGCCCGCGCAGCC CCCT GGCTGCGCGGGCG        TTTTCGTTTCAGCCC 100 42
LOY33_RS04775 NONE
LOY33_RS04780 1092180 .. 1092198 +  -8.8  -3.01712   AGAAGCGCCCGGTTC             GGCGCTGA ACC TCAGGGCC             TCTTCGCCGGCAAGG  59 18
LOY33_RS04785 NONE
LOY33_RS04790 1095015 .. 1095034 +  -7.8  -4.75472   ATCGCCCATGACCTG            GCGGCGAA CCTG TTCGCCGG             TTTTGTTGCTCTCGC  85 385
        mreB 1101147 .. 1101189 + -14.9   -2.9462   CCGGTTTACAGGTAG CGCCCACA-GTGCTACCTGT ATGT GCTGGTGGCGCGTGTGGGCG TCGTTTCCATCCATC  84 65
        mreC NONE
        mreD NONE
LOY33_RS04840 NONE
         rng NONE
LOY33_RS04850 NONE
LOY33_RS04855 NONE
        tldD 1111656 .. 1111695 +  -2.9  -4.86862   GTGGTAAGGCGCTCG  CCCATATCAACCAGCG CCTGCATCT CGC-GCTTGATTTGGG  TTTTGCTTTTTTCGC  77 504
        pmbA 1113271 .. 1113289 + -13.1   -5.0925   AGGTTACACATCGAA             GCCCGGC CCCGT GCCGGGC             TTTTTGCTTTTCGCC 100 100
LOY33_RS04875 NONE
LOY33_RS04880 1115142 .. 1115156 +    -7  -4.08706   GGTATCTGACACCGC               CCACCG CTT CGGAGG               TTTCTGTCATGCAGC  68 32
LOY33_RS04885 1115625 .. 1115639 +  -2.8  -3.09933   ATTATGGAACCCACT               GATATG CCG CATACC               TTGCCTGCATTGCCA  43 24
LOY33_RS04890 NONE
LOY33_RS04895 1117377 .. 1117397 +  -8.2  -3.76482   ACGAACTTGGCCGCT            GCTCGGGC GTGCA GCCCCAGC            TTGTTGATAATCTCG  68 261
LOY33_RS04950 NONE
        mlaE NONE
        mlaD NONE
LOY33_RS04965 NONE
LOY33_RS04970 1127481 .. 1127526 +    -6  -5.39721   ACGGGTGCGCGACGG GCCCCTCTGTCAGAG-TCCTCG TTTA CGGGGTTCGCAGGC-GAGGGGC TTTTTTGTATGATGG  95 43
LOY33_RS04975 NONE
        murA NONE
        hisG 1129845 .. 1129871 +  -7.2  -2.88861   ACCGCGGCTGACCCC         TGCGCGCGAC CTTCGCT GTCGCGCCCG         TCTATCCGCGTCATA  53 30
        hisD NONE
        hisC 1132371 .. 1132414 + -31.2  -3.06183   ATAGCGCCTTGTCTT TCGCCAGCTAGGCGGGCTCC TGCG GGAGCCGGCCTAGCTGGCGA TTGCATCGACGTGGC 100 40
LOY33_RS05000 NONE
LOY33_RS05005 NONE
LOY33_RS05010 NONE
LOY33_RS05015 1135379 .. 1135408 + -10.7  -3.18023   TCGGTGAGCTGGGTG       GGCAGGC-CCTTGA TGA TCAGGGTGCCGGCC       TCTTCGTCGTACTCG  64 46
LOY33_RS05025 1137057 .. 1137082 + -10.3  -5.64274   AACAGCTTCTGAAAA         CCGCGTCCGGT GCGA GCCAGGCGCGG          TTTTTTTGTGGGTGC 100 46
        lptF NONE
        lptG 1146055 .. 1146072 + -12.7  -4.93547   CCTGGCCAACAAAAA             GCCGACC TCAG GGTCGGC              TTTTTCATTGGTTGC 100 48
        arcD 1162337 .. 1162357 +  -7.5  -3.53012   GCGTCTGCTCCACGG            CCGGGGC CAGGTCT GCCTCGG            TTTCGCCGGCCAACG  60 242
         edd NONE
LOY33_RS05170 NONE
LOY33_RS05175 NONE
LOY33_RS05180 1175593 .. 1175626 +    -6   -2.6193   CGCAGTGCGGGCCAG     CGGGTGAATGTCAC AGGTCG GTGACATTCGCGCA      TCCCTTCGTTACTTC  48 2
LOY33_RS05185 1177015 .. 1177050 + -11.9  -2.87132   GCGGGCCCCTTCGCC   GGCA-AGGC-CGGCTCC TACA GGAGCCGCGCCGCTGCC    TGTGTAGGAGCCGGC  71 51
LOY33_RS05190 NONE
LOY33_RS05195 NONE
LOY33_RS05200 1180009 .. 1180032 +  -3.9  -3.30124   CACCGACAACATTGC          CCAATTCAG GGGCCG CTGAATTCG           TTGTAAAGCATGGAC  47 7
LOY33_RS05205 1181448 .. 1181460 +  -6.2  -4.07687   TATGTTGTAAATTTA                CGCC AATTC GGCG                TTTTGCCGGCAAGGT  66 46
LOY33_RS05210 1182533 .. 1182554 +  -7.3  -3.01712   GATAATGCGCGAGGT           CATCGGCAT GTAG ATGTCGGTG            TCTTCAGGCAGCGGG  51 165
         zwf NONE
         pgl NONE
LOY33_RS05230 1186349 .. 1186369 + -10.4  -6.06723   GCTGTACGGCTTTGA            GGTGCGCT TGGTC GGCGCACC            TTTTTTTTTGCCGGC 100 55
LOY33_RS05235 NONE
LOY33_RS05240 1188412 .. 1188448 +  -5.7  -2.84634   GCCCGTTCCACGCCG    TCGACCTGCGGGTACAG CCG CTGCAGCTGCAAGGCGA    TCTGGTCGTCTGCGG  46 462
LOY33_RS05280 NONE
LOY33_RS05285 1198803 .. 1198826 +    -6  -3.36823   ACATTGAGTCAGACG          GCGCGC-ATGA GTA TAATGGCGCGC          TTCCATTTTCCCGCC  56 57
        guaB 1200346 .. 1200372 + -14.4  -2.94412   CTGGCAATACCTGTA         AGCGGGGCTGTT CAC GACAGCCCCGCG         TCGTTTCCGATTACC  82 46
        guaA 1202159 .. 1202187 + -14.7  -3.29043   CTCGTTCACTATTGA        GACTTTTACCGTC TTT GACGGTAAAAGCC        TTCTCGGGAAAGCTT  86 202
LOY33_RS05305 NONE
LOY33_RS05310 1204433 .. 1204451 + -13.1   -4.7497   CATCACTCGCTTGAA             CCCGCCC GAACA GGGCGGG             TTTTTCGTAGGTGGA 100 57
LOY33_RS05320 NONE
LOY33_RS05325 1207221 .. 1207237 +    -8  -2.78891   CCGGCACTACTGTTA              GCTGCT CAGGC AGCAGC              TCCTTCAGTTAGAGT  54 25
LOY33_RS05335 1211539 .. 1211570 + -13.6  -2.76263   AGCCTAATTCCCCTG      CGCGGCAGGGGCAG GCAG CAACCCTTGCCGCG       TCATTCGCTGCTGCA  76 34
LOY33_RS05340 1211969 .. 1212026 +  -9.2  -3.07043   CGTATCGTCGCGTAT GCTGGC-CGGCGCCGCCGGC-ACATGG AGGCAAG CTATGCCGCCGGCG-CGACGCGCTAGC TCTTGAACTGGTCAA  64 111
LOY33_RS05360 1215192 .. 1215208 +  -7.9  -2.77899   CTTAATTGGCAGTAT              TGCGCCG ACG CGGTGCG              TGCTTGATCGAAACG  54 101
LOY33_RS05365 1216243 .. 1216256 +  -2.3  -4.16842   GCAAAACGTCCCTGA               GCAAG AGCC CTGGC                TTTCTTGAGACTGCC  59 4
LOY33_RS05370 NONE
LOY33_RS05375 1217522 .. 1217543 +  -2.2  -2.84634   TCAGGAGTCAGGGAT           GTCGTGCT ATCGGG AGTACGCC            TATCGTGCTATCAGG  39 73
LOY33_RS05380 NONE
LOY33_RS05385 NONE
LOY33_RS05390 NONE
LOY33_RS05395 1219814 .. 1219829 +  -6.8  -3.66018   TCCTGTGCATCTCAT              CGTGCC ATCG GGCATG               TTGTTCCGCTGGTCA  63 63
LOY33_RS05400 1222528 .. 1222538 +  -8.2  -3.08073   TGCAGCATTGGTCAG                 CGGG GTT CCCG                 TCTCTTGGGAGTACT  56 325
LOY33_RS05410 NONE
LOY33_RS05415 NONE
LOY33_RS05420 1225361 .. 1225381 +  -3.8  -4.56597   AACGTGCCGCTGACC            GCGACGGG TTTCT CCCGGCGG            TTTTTGCGCAGCGGC  70 333
LOY33_RS05430 NONE
LOY33_RS05435 NONE
LOY33_RS05440 NONE
LOY33_RS05445 1229312 .. 1229338 + -14.5  -5.30616   TTTTCTCGCCATACA        CGCCGCAATGCG CTCT CGC-TTGCGGCG         TTTTTCTTTGGCTCG 100 68
LOY33_RS05450 NONE
LOY33_RS05455 NONE
        trbB NONE
LOY33_RS05465 1233368 .. 1233378 +  -8.2  -2.64616   GTTCTTCTCGTTCTC                 CGGC GGG GCCG                 TCGTATGAGTGCCCC  53 7
LOY33_RS05470 NONE
        trbE NONE
        trbJ 1236851 .. 1236881 +  -3.3  -3.48063   GTTTCTACAACAACT      GACGGAGGCGGCCAT GCG AT-G-CGCTCCCGTC      TTGTCGGTTTCGCTG  47 24
LOY33_RS05485 NONE
        trbL NONE
        trbF 1239292 .. 1239303 +  -2.2  -3.36273   CTGCCTTTCCGCTTT                TACG CTTT CGTG                 TTGATGTTCGCGGCC  46 43
        trbG NONE
LOY33_RS05505 1241708 .. 1241718 +  -3.2  -3.85698   CCCTGATCCCTCACA                 TGCT CGA AGCG                 TTTATGGCCGGGGAC  55 184
LOY33_RS05515 NONE
LOY33_RS05520 1243368 .. 1243378 +  -6.8  -3.87815   ATTTGTTCTGAGCGG                 CGAC GTG GTCG                 TTTATCGAGATCGCG  66 198
LOY33_RS05525 NONE
LOY33_RS05530 NONE
LOY33_RS05535 NONE
LOY33_RS05540 NONE
LOY33_RS05545 1251061 .. 1251092 + -20.3  -3.91897   CCCGCCAGCCAGAAA      GCCAAAAGCCCGC CTAATA GCGGGCTTTTGGC       TTTCTGGCTGGCGGC 100 312
LOY33_RS05555 NONE
LOY33_RS05560 NONE
LOY33_RS05565 1254676 .. 1254686 +  -5.4  -3.08088   GGTGCCCGCATGTGA                 GGAT GCA ATCC                 TATGTTCGAAGGTTT  49 66
LOY33_RS05570 NONE
LOY33_RS05575 1256058 .. 1256068 +  -2.4  -3.21099   AAGGACTTCCTGCGC                 CGGG TAT CCCA                 TTCCTGATCGCGGGC  44 8
LOY33_RS05580 1256608 .. 1256631 +  -3.6  -3.53012   GTTGCCCCGGCCGCA          GGCGCGCTTG CTAT CCTGCACGCC           TTTGCGCCCCAGCCA  51 78
LOY33_RS05585 1257466 .. 1257481 +  -3.2  -2.52795   TACAGGCGGTGCAGG              GTGACG TTCA TGTCGC               TGGCTTCAAGGGCTT  39 479
LOY33_RS05595 NONE
LOY33_RS05600 1260183 .. 1260221 + -19.8   -4.8269   GGCCGCTACCCCCGG   TGCAAGGGAGCATTCGAT TTA ATCGAATGCTCCCTTGAG   TTTTTAGTAATTGTC 100 40
LOY33_RS05605 NONE
LOY33_RS05610 1262964 .. 1263017 +  -5.1  -5.24129   CCGGCGCCTGCCCCC CCTGTAATGCTCCCCCTGTGCGCAGC CCG GCTGCGGGCACGGGGCGC-TTGCGAC TTTTTTATGGCGGCG  86 53
LOY33_RS05615 1264530 .. 1264553 + -18.2  -4.72272   GCGAGGCGAAAGCAA          GGGCAAGGCC AGGC GGCCTTGCCC           TTTTTCATCGCCGCC 100 72
LOY33_RS05630 NONE
        tadA 1272901 .. 1272925 +  -7.8  -3.40611   GTCTTGCTGTACCAC          TGCTTCTGCG ACAGG CGCGGCAGCA          TCTTCTTCACGTCCA  59 306
        purL NONE
LOY33_RS05650 1279085 .. 1279095 +  -8.2  -2.61274   TACCAGCAATGGCAA                 GGCG ATG CGCC                 GTTCCTTGCGGTACA  52 495
        gspK 1281406 .. 1281450 + -18.1   -3.2614   CTATCGAAGCTCATC CCG-TCGGGGCTGG-CGAACT GGTTG AGTTCGGTCAGCCCCGAGCGG TTGATGTCGGCGCTG  89 420
LOY33_RS05680 NONE
LOY33_RS05685 NONE
        gspD 1287330 .. 1287340 +  -3.2  -3.17763   CTGGACGAGGGCACC                 TGGT GAA ACCG                 TTGCTGCCCTATCGC  45 20
LOY33_RS05695 NONE
        gspF NONE
        gspG NONE
        gspH 1290881 .. 1290902 +  -2.1    -3.727   CAGGTGGTGAACGTG           CCATGAAGG CTCG CCAGCGTGG            TTTCACTCTGCTCGA  51 20
LOY33_RS05715 NONE
LOY33_RS05720 NONE
LOY33_RS05725 NONE
        gspM NONE
LOY33_RS05735 1293961 .. 1293974 +  -3.7  -4.56597   CCTTCAATTGGTGAT               TCGCC AGTG GGCGC                TTTTTCGCCGGCAAG  70 27
LOY33_RS05750 NONE
LOY33_RS05755 NONE
LOY33_RS05760 1296738 .. 1296751 +  -2.3  -2.81905   CTCAAGTACCCTGTA               CGGCT TGCC AACCG                GTGTTTCTATGTTCT  39 66
LOY33_RS05765 1297217 .. 1297235 + -10.3  -4.17316   CACGCAAGAACGCCT             GCGCCAT GTAAA ATGGCGC             TTCTTTTCACCGGGT  82 15
        purT 1298585 .. 1298605 +  -4.6  -3.53012   AGCAGCCTGTCTTCA            GAGTTCCG TATGC CGGGTCTC            TTTCAGGCACAGCAC  53 130
         ffh 1303613 .. 1303630 +  -6.9  -3.58726   CGGAACCCCGCCGCT             GGCGGGA CCCG TGCCGCC              TTCTATATACAGAAG  60 77
        rpsP NONE
        rimM 1304584 .. 1304621 +  -5.5  -3.28745   GGTGGAATGGGACGC   GGACTTCTAGACGATGG CGAG CCTTCGTGTCGAAGTCA    TTACGTTGTTCCCCG  51 16
        trmD 1305363 .. 1305374 +  -5.8  -3.06696   AACGTATCGATGGTG                GGTC TGAC GACC                 TATCTTAGGAGCACA  49 39
        rplS 1305787 .. 1305802 + -10.4  -5.56673   CCATGCGAAAAGAAA              GCAGCC TTCG GGCTGC               TTTTTTGTTGTCCGT 100 70
LOY33_RS05815 1306225 .. 1306240 +  -7.5  -3.28712   AGACAAGCGGCCGGT              GCCGG TGTTGC CCGGC               TTCTGAACGGCCAAC  56 4
        xerD 1309114 .. 1309132 +  -2.2  -4.66163   TCGCGGTTTACACCC             GGGCCCTG GAT CGCGGCCG             TTTTTCGGTACGCCT  66 104
        dsbC 1309935 .. 1309960 +  -8.9  -5.00616   AGTAATTCAATCAGT         GAGCCGTCACC ATGG GGAGACGGCTG          TTTTTTCGACCGGCG 100 36
LOY33_RS05835 NONE
        thrC 1312775 .. 1312798 + -15.2  -5.06414   GCAGCGTTGAACCAG          GCCCCGGTGC GCAA GCCCCGGGGC           TTTTTGTTGCGCGGC 100 53
LOY33_RS05845 NONE
LOY33_RS05850 1313889 .. 1313915 +  -7.3  -4.89063   GCAGCCCTCGTTTAA        CCCCGA-CGG CCTCCCCA CCGCTCGGGG         TTTCTTTTTGCCTGC  87 136
LOY33_RS05865 1316696 .. 1316725 +  -3.5  -4.56597   GCTGCAATGGCTGCT      GGGCGAGCGCGGC TGATCC GCC-CGC-CGACC       TTTTTCAAACCAGAG  69 10
        recJ NONE
LOY33_RS05875 1319975 .. 1319994 +  -9.2  -3.36273   TAGTCCGAATCGTTG            GCCCAGGC CAGC GCCTGCGC             TTCGTCTTCGAAGCG  63 320
LOY33_RS05905 1326178 .. 1326199 +  -2.2  -4.91511   CGCGTGCAGATAAGG           TGCGTGGG CTATAA TCTGCGCA            TTTTTCTGCTCGCGT  74 105
LOY33_RS05910 NONE
LOY33_RS05915 NONE
LOY33_RS05920 NONE
LOY33_RS05925 NONE
LOY33_RS05930 NONE
LOY33_RS05935 NONE
LOY33_RS05940 1334783 .. 1334808 +  -3.2   -4.0162   CCAAAGGCCGCCCGA         CGGG-CTGCCG CGCAC CTGCAGACTCG         TTTATACTCTCCGGC  58 126
        prfB 1335931 .. 1335949 +  -8.1  -2.64155   CGAGTACCTGGAAGC             CAGCCTC AAGCA GGGGCTG             TAAGTTTCGCGACCC  53 4
        lysS 1337540 .. 1337557 + -10.5  -4.84527   GAGTGTCTTGAACAA             GCCGCCT CTAG GGGCGGC              TTTTTCATGTCTGCG  95 39
LOY33_RS05955 NONE
LOY33_RS05960 NONE
LOY33_RS05965 NONE
LOY33_RS05970 NONE
LOY33_RS05975 1341531 .. 1341547 +    -5  -3.72893   CTGGTCAGTTCCATG              CGGGCC TGTTC GACCCG              TTTCATCAAGGCCTG  55 135
         ppc 1351159 .. 1351176 +  -6.3  -3.31322   GATTGGCCCTGAGTG             GCGAATC CATT GATTTGC              TTATAAAAAATTGAG  54 251
         adk 1351872 .. 1351895 + -18.2  -4.11183   GCTCGGATGTGCACA          CAACGGCCCG CTTG CGGGCCGTTG           TTGTTTATAATGCCG 100 46
        tsaB 1352680 .. 1352708 +  -2.4  -2.54371   GTCCAGTTATCAGTC       G-GGCATTTGCGA AGTC TCTCAGGTGCCGC        TAAATTGCCATCATT  38 91
LOY33_RS06015 NONE
LOY33_RS06020 1353878 .. 1353894 +  -4.3  -2.62184   GCACAGGGCGCCCGC              AGCCGAG CAG CTTGGCC              TGCTCTGACCGCCCC  42 1
LOY33_RS06025 1354769 .. 1354787 +    -3  -3.15324   GTTCAGGCGCTGATC             GTCCATGC GGG GAGTGGGC             ATTTTCCTGGCGATA  43 28
LOY33_RS06030 1355674 .. 1355687 +  -3.7  -3.76482   CCTGGCTCATCACCA               CCGGG CGCA CCCAG                TTGTTGCTGATGTCC  57 237
LOY33_RS06040 1357145 .. 1357159 +  -7.8  -3.12351   GCCATGCTGGTCGAC               GCGCTG CAG CAGTGC               TTCCATCTCGCGCAG  54 212
LOY33_RS06050 NONE
LOY33_RS06055 1362159 .. 1362198 + -10.6  -2.72661   CTTCTTGGCCAGGCT  GGTAGCCGCGG-CCGCCGG GTT CTGGCGGATCGTCGCTTCC  TGCTTGCCGATCATC  60 137
LOY33_RS06075 1366338 .. 1366361 +  -5.2  -3.68936   CTCGCCATCGGCGCT          GATGCGGATC CAGC GGTCGGCGTC           TTCTTCACCTTCCTC  57 176
        tcdA 1372821 .. 1372841 +  -6.7  -3.05384   CTGCGTCGCGTCCAG            GGGGGCCAG GCG CTCGCCCCA            TTGCATCAGCAGGCG  51 307
LOY33_RS06130 1378419 .. 1378442 +  -9.6  -2.55722   TGACCGAACCCGGGT          CGTAGGCGTT GTGC AATGCCTGCG           TGCGTTCGATCCTGT  54 275
        rpsB 1384962 .. 1384976 + -12.8  -4.59853   CTCGGCACGCAAAAA               GGGGGC TTG GCCCCC               TTTTTGCCACCTTGA 100 62
         tsf 1386009 .. 1386036 +   -17  -3.85698   CTCTGTCGCCCCAAA        GAGGCTGCCCGC TCAC GCGCGCAGCCTC         TTTGTCAAAGCGGGG 100 52
        pyrH NONE
         frr NONE
        uppS 1388215 .. 1388229 +  -3.5  -2.81815   AACCAGCGAGCAGGT              CGAGGC TGGA GCC-CG               TGCTTAATGCTTAAA  41 4
LOY33_RS06180 1389045 .. 1389088 +  -4.6  -3.18274   CGCCAACTGGGGCGC GCTGTGAGCCGCCC-GCAACG GATCA CGGTGCTGGGCG-C-CACAGG TTCCATTGGCCTGAG  49 19
        ispC NONE
        rseP 1391664 .. 1391691 +   -12    -4.183   CGCTTCGCTCAATTG        CGAACCTGCCGCG TCC CGCGGTGGG-TCG        TTTATTGCCAGTTGG  90 41
        bamA 1394111 .. 1394121 +  -3.2  -2.55015   CGGATTCTGTAGGAG                 TGCA TCG TGCG                 TAAGTTGACTCAACT  39 65
LOY33_RS06200 NONE
        lpxD 1395736 .. 1395762 + -10.1  -2.57501   CCTTGATTTGCTAAA        GGAGCGCCGCTC GAAC GTGCG-CGCTCC         CTATCTTTACTACAG  62 83
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB 1398814 .. 1398839 +   -14  -4.35644   GGCTGTAGTTTTGAT         CGAGGCCCGG TACAAT CCGGGCCTTG          TTGTTTTGTGCTGCT  95 76
        dnaE NONE
LOY33_RS06235 1403426 .. 1403438 +  -5.5  -2.63913   TTATGATCGCCTGAT                GAGCT ACG GGCTC                TGATCTGAACTCATC  46 10
        tilS 1405020 .. 1405033 +  -5.2  -3.53761   CCTTCGCTTTCCCCG               GCGG CACTGA CCGC                TTTAACGCAGACTTC  55 257
LOY33_RS06245 NONE
        kdsA 1407572 .. 1407593 + -15.9  -2.66216   GTACCGCCCGTTCAT           CCCCTGACC CCCG GGTCAGGGG            CTTGTCCTCGTCAGG  84 60
         eno 1409072 .. 1409089 +  -9.1  -3.16564   TGCTTTCCCCACAAA             GCCTGGC TTCG GTCAGGC              TTCGTGCCATCAGCC  60 115
        ftsB NONE
        ispD 1410108 .. 1410141 + -12.5  -3.48276   TGGCTGAGGCAGCGC     TGGGCCAATCGCGG CAATTGA CCGCGGT-GGCCCA     TTCTCTGGCAAGCCA  81 5
LOY33_RS06275 NONE
        fghA 1413245 .. 1413265 + -12.6  -5.65177   AAGCAGGTAGAATCA            CGCCCTGA CTCAA TCAGGGCG            TTTTTTTATGCGTAT 100 74
        ispF NONE
        truD NONE
        surE NONE
LOY33_RS06300 1416242 .. 1416258 +  -7.9  -2.87931   CGCGGGCGTCGAATT              CCCGGTG CAT TGCCGGG              TCTATGGGGCGTGCG  56 52
LOY33_RS06305 1417224 .. 1417242 +  -4.5  -2.78216   GCAAACCTGTAGATC             CGTTGCA ATTCC TGCCACG             TCGTTGATAAGCATG  44 0
        rpoS 1418386 .. 1418406 + -16.9  -5.14163   ACGGCTGTGAAAAGG            CGCCTCGAC CCA GTCGAGGCG            TTTTTGTTCGTGCCT 100 46
LOY33_RS06325 1422857 .. 1422870 +  -9.5  -5.28778   ACGCTTTCTCAGAAA               CCCGC CCCG GCGGG                TTTTTTGTGCCTGCT 100 46
LOY33_RS06335 1425982 .. 1425995 +  -4.5  -3.03124   CGACCATCCACCCCG               CTGAC GGGC GTCGG                TGTTCGGAGGTGAAG  47 22
LOY33_RS06340 1426481 .. 1426500 +   -15  -4.42238   GGCATCCATCTGTCA            CGCCCAGG TTCG CCTGGGCG             TTTTCATTGCGATGC 100 58
LOY33_RS06345 NONE
LOY33_RS06350 1427636 .. 1427651 + -11.8  -5.28176   CAAGCACTGAACCCC              GCCCGC CGAC GCGGGC               TTTTTTATGCCTGGA 100 31
LOY33_RS06355 NONE
LOY33_RS06360 NONE
LOY33_RS06365 NONE
LOY33_RS06370 NONE
LOY33_RS06375 1431813 .. 1431830 +  -9.8  -4.99435   GCATCACCCCCTGAA             GCCCCG CACTGT CGGGGC              TTTTTCATTCTTCAA 100 27
LOY33_RS06380 NONE
LOY33_RS06385 1432475 .. 1432493 +   -16  -4.72272   GATCCAACCTTACAA             GGCCCTGC ACC GCAGGGCC             TTTTTCATACCCGGA 100 93
LOY33_RS06390 NONE
LOY33_RS06395 1434197 .. 1434209 +  -3.3  -3.40403   CAACGTTCGGCCCTG                GGCCT GTA AGGAC                TTCTCATGACCCAAG  47 17
LOY33_RS06400 1434586 .. 1434606 + -14.1  -2.80816   CCACCGAGATCATGA            CCATGTCGT TCA ACGACATGG            TCTGGTGGCTCACGG  80 97
LOY33_RS06405 NONE
LOY33_RS06410 NONE
LOY33_RS06415 1437090 .. 1437120 + -13.9  -2.57132   CTGGCGCGCCCCCCC       TGCCTGCCAGCGC TGCGT GCGCGGGCAGGCC       CTTCTGGAGCAGCAA  74 42
LOY33_RS06420 1438193 .. 1438227 +  -3.6   -2.5001   CTGAACCCCTATGCA     TTTTGGAGAATGATGA TGG TCATCACTCAGCAGAA     CTTGATGCAGATTCT  41 37
LOY33_RS06425 1438737 .. 1438751 +  -4.9  -3.07192   TCAAACTCTGGGCCC               GCGCC CGCGA GGTGC               TGTGTTGAACCGCTT  47 3
LOY33_RS06430 1439239 .. 1439251 +  -3.4  -3.01712   GGTTACATACGCGCG                CTCA CACCT TGAG                TGTTCAGCCACGCCG  42 14
LOY33_RS06435 NONE
        recA NONE
        recX 1441565 .. 1441580 +  -5.4  -4.08692   CGGGGCTTCATTGTG              CTGAGGC TTT GCC-CAG              TTTTCCGAGCGGTTG  64 127
LOY33_RS06460 1444512 .. 1444525 +  -3.7  -4.74103   GAATGCTGTTTTCCT               GGCCC CGAC GTGCC                TTTTTGGCTTCCGGC  75 180
LOY33_RS06465 1445266 .. 1445290 +  -8.5  -5.08824   GGAATCGGTTTCAAC          GAGTTAAGGCC ACT GGCCTTCACGC          TTTTTTGACTCGGCG 100 19
LOY33_RS06470 1446039 .. 1446068 +  -6.3  -3.19389   AAAGGTCAGGCGCGT       GCCTGAACCCTGC TCGC GCAGAATCCAGGC        TTCATGGGTCAGTTC  51 352
         fpr 1447558 .. 1447575 + -11.3  -6.09133   AGTACCAATAAAAAA             CGCAGAC CTTG GTCTGCG              TTTTTTTTTGCCCTG 100 47
LOY33_RS06510 1453835 .. 1453851 +  -8.7  -3.65199   GGCGAGGCTTCTACT              GTTCAGC GAC GCTGGAC              TTTCCCTGGCGCGTT  69 105
        dinB 1459555 .. 1459582 + -21.4  -3.23216   CACGCCCGAGTGAAA        CGCCAGGCATCG TGGT CGATGCCTGGCG         TTCATGGTGCTGGAG 100 28
LOY33_RS06555 NONE
LOY33_RS06560 1465212 .. 1465238 + -15.9  -3.61398   AGGCGTAAAAAAAAA        CCGCGATCGGCC GAGT GGCCG-TCGCGG         TTCTTCACGCGAGGA  90 108
LOY33_RS06570 1466655 .. 1466682 + -12.8   -5.1675   TGTTGAAAGACGCAA        GCCCGATTTTTC TTTA GAGGAATCGGGC         TTTTTTAATGGGTAC 100 65
LOY33_RS06575 NONE
LOY33_RS06580 NONE
        aspS 1469435 .. 1469456 + -15.9  -3.75332   AGTAAGCGGGCCCGG           GGCGCATCC ACTT GGATGCGCC            TTTGCGTTACGGCAT 100 36
LOY33_RS06590 1470312 .. 1470364 + -16.4  -3.98256   CAGTTCTGGCGTACT C-GAGGCCGGATTCGTCCGCAGGCAC CTT GTGCCCGTG-ACGGGTCCGGCTTCTG TCTTTTTAATGGCGC 100 45
        ruvC 1470931 .. 1470941 +    -4  -2.52795   GGCCGCCTAAGGCTC                 TGAT AGC ATCA                 TCGGTTAACACAATT  41 23
        ruvA NONE
        ruvB NONE
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA 1475553 .. 1475563 +  -3.2  -2.72471   TTAACCTTCTTAGAG                 GACT GCT GGTC                 GTTCTCTGCTGCGCA  41 41
        tolB NONE
         pal NONE
        ybgF 1478224 .. 1478240 + -10.8  -5.27477   CCCGCCTGGAAGAAA              CCCGCG CTAGT CGCGGG              TTTTTTCGTTAGAAT 100 45
        queE NONE
        queC 1479717 .. 1479742 +  -7.7  -3.28712   TTTTTTACGGTGGGG         TGTTGATTTCC TTAA GGAAATCAGTA          TTATACGCCCCACGC  59 42
LOY33_RS06655 1479846 .. 1479868 + -13.5  -5.92337   CCACCATTTCGAAAA           CCCGCTTTC CATGA GAAAGCGGG           TTTTTTTTCGTCTGT 100 35
LOY33_RS06675 NONE
LOY33_RS06680 1486589 .. 1486647 +  -4.1  -3.28712   CGGTCACTCTCGACA GCCCTGCAAGCCGCGACTGGTCTCTCCCTCA GAA TGAGGG-GTG-TCAG-CGCG--T-GCAGGGC TTCTGGAGGGGGGGC  47 54
LOY33_RS06685 NONE
LOY33_RS06690 1489182 .. 1489212 + -18.3  -3.53012   GCAGGCAACTGACCG       CTGGGCTGGCGGG CTTGC CCCGCCAGCCTGG       TTTGGCAAAAAACCC 100 29
        nadA 1490455 .. 1490500 + -24.7   -2.8547   CGCCTGAAAGCAGCA TCGCGGGTCGAGCCCGCTCCC ACAA GGGGGCGGGGCTGACCCGCGA TATGGTGTGCGCGCT 100 34
LOY33_RS06705 NONE
LOY33_RS06710 1493428 .. 1493461 +  -2.4  -3.70853   CCGCTGCTCTAGCCG    CGGC-GCA-CGCTTCG CCGG CGAAGCGCTTCAGCCC     TTGTTCAATGCTTGC  51 29
        dapA NONE
        bamC 1496753 .. 1496768 +  -6.8  -3.07994   GCGTGCTGAGCGTCA              TCCAGG ACAA CCTGGG               TTAAGTGCGCTTCGC  54 6
LOY33_RS06735 NONE
LOY33_RS06740 1498303 .. 1498331 +  -3.9   -3.5393   AAGCGCCTGATACCA        CGCGAATTTTTTT CAC AAGAAGCTTTGCG        TTTGGGAAAACTGCT  51 56
LOY33_RS06745 1498466 .. 1498492 +   -21   -5.0925   GCCATACATGCAAGA         GCCCCTGAAACC TAC GGTTTCAGGGGC         TTTTTGCTTTTCGCG 100 37
LOY33_RS06750 1498840 .. 1498860 + -12.6  -5.27938   AGTGATGAAAATGAA            TGAGGCGC TTGCT GCGCCTCA            TTTTTCTTTCAGCGT 100 36
LOY33_RS06755 1500154 .. 1500168 + -11.4  -3.25204   CAGGTCATCATCAAC               GGGCTG GAT CAGCCC               TCTCTTTCGGAATCA  71 68
LOY33_RS06760 1501562 .. 1501572 +    -4  -3.20808   CTTTGAAAGGTGTAA                 CAAA TCT TTTG                 ATTTATTGTGCTGAC  47 130
LOY33_RS06765 1501876 .. 1501898 + -14.9  -5.86332   GGCCTGATCAAGAAA           CCCCGACAC GCCAA GTGTCGGGG           TTTTTTTTGGCTTGC 100 64
LOY33_RS06775 1502752 .. 1502774 +  -7.7  -2.62192   CTGCTCCTGAATAAA           GGCTGAACA AGAAG TGTTCTGCC           CTTCGTTCAATAAAG  53 69
LOY33_RS06780 1504546 .. 1504604 +  -6.7  -2.94099   GCTACACACTGACCG CGTGCGCAGGCTGGCG-AGGGAA-CGGC GGTCGA GCGGTTTCCCGGCGGTGGCCTGCGC-CG TATATACTGCGCGCC  51 29
         rnd NONE
LOY33_RS06790 1506079 .. 1506118 + -17.8  -3.86822   GCTTTTTTCTGTCTT  GCATGGCGC-GGCCCGCGC AGT GAGCGGGCCAGCGCCGTGG  TTTATGCCAAGGTTA 100 41
LOY33_RS06795 1507255 .. 1507267 +  -9.1  -3.29461   GGCCTGCAGGTACTC                GGCCA GGC TGGCC                TTGTCGCCCAGCTTG  61 206
LOY33_RS06805 NONE
LOY33_RS06810 1510054 .. 1510064 +  -8.2  -3.03159   TTACTTGAATTTGGG                 CCCG GAG CGGG                 TGTTCAGGCCCTTGG  57 469
LOY33_RS06830 1511434 .. 1511448 +  -5.6    -3.922   CGCGGATGATCTTGG               CGGCCA CCT TGGGCG               TTTCGTTGAGCATTT  63 105
LOY33_RS06845 1514571 .. 1514581 +  -2.4  -3.89346   GGCAGCCGCGAGCGC                 CTCG AAC CGCG                 TTTGTAAGATCCGCC  53 8
LOY33_RS06850 NONE
LOY33_RS06855 NONE
LOY33_RS06860 NONE
        pxpB NONE
LOY33_RS06870 1518330 .. 1518371 +  -9.3  -2.70932   GAGGTTTGCCGACTG ACAG-GGCCTCTTCGCCGGC AAG GCCGGCGAAGGGTTCACCGC TACTTGGACAGAAAC  61 25
        cysK 1522850 .. 1522880 + -19.8  -2.72866   TGCCAACACTGAATG       TCCGGCCCCGGT TGTTTTT ACCGGGGCCGGA       TCGGTTTATCATGTC 100 105
LOY33_RS06895 1524113 .. 1524125 +  -4.8  -3.44229   GCGTGCGTTGTCGCA                CCAC CCGGC GTGG                TTGTAGTGCTGGGCT  51 261
LOY33_RS06900 1525286 .. 1525297 +  -2.2  -3.04398   CCGGGATCATGAAGG                TCAC GGTG GTGG                 ATTTTACCGGGCCGA  41 162
        aceK 1528459 .. 1528495 +  -7.1  -3.08015   AGGCGTTTTTCCATG    CGCTGCTGGCGCTGC TCGATCT GCCTGGCCAGCGGCG    TCTTCACATACTTGG  52 481
LOY33_RS06920 1529989 .. 1530009 +  -5.3   -3.1364   AGCGCCAGGCTGATG            GTCGAGCGA CGC TTGCCCGGC            TTGCGTACTTCCATC  49 123
LOY33_RS06935 1532350 .. 1532369 + -11.4  -3.51235   GCGTGTAGCCGATAA            CGGCCATC TTCG GGTGGCCG             TTCTGCTGTCTGTGG  74 49
LOY33_RS06940 NONE
         def 1534046 .. 1534056 +  -8.2  -2.73364   TGCTGCGCTGATAGC                 GCGC CAG GCGC                 TCATTGAGCTGCAGC  52 66
LOY33_RS06955 1535240 .. 1535255 +  -2.5  -3.48276   CCAGCGGCAGGTCCA              G-GCCC AGGGC GGGCGC              TTCTATGAACCCCAC  46 316
LOY33_RS06975 1539293 .. 1539313 +  -5.5  -4.13767   CTCCTTTGGAAAAAA            TGCTATC TTATTTT GATAGCA            TTTTCCGATGAACAA  66 55
LOY33_RS06980 NONE
LOY33_RS06985 NONE
LOY33_RS06990 1540816 .. 1540833 +  -9.1  -4.61873   CGCATTGACCGGTCA             GGGCTGC GCCA GCAGCTC              TTTTGCTTTATGAAG  86 195
       fadD2 1544983 .. 1545040 + -33.7  -3.16647   TATCGCCTGAAAGCC ATTCGCCGGCCAGGCTGGCTCCTAC TTTGCCGT GTAGGAGCCGGCCTGGCCGGCGAAG CTTTTGCTGAATAGA 100 31
       fadD1 1546984 .. 1547042 +  -8.5  -2.78032   TCGGGCCTCATCGCG ----GGTCAAGCCCGCTCCCACAAGGA-CA GTAG TGATCCCTGTGGGAGCGGGCTTGACCCGCG ATGTTTTCAACGCAG  58 51
        hrpA 1554224 .. 1554239 +  -5.4  -3.53012   ATTGCCTGTATTAAT              TGGTAC TTTC GTGCCA               TTTGACCGACAGAAC  55 145
LOY33_RS07035 NONE
LOY33_RS07040 NONE
LOY33_RS07045 1556401 .. 1556420 +  -5.6  -5.03715   GATTCGTCCCCAGCA            CAAGTGGC CTGA GCCGCGTG             TTTTTTCAACGTAAT  86 158
LOY33_RS07050 1557830 .. 1557847 + -14.1  -5.86061   ATCCGTTAGATCTTC             GCCCCGC ACCT GCGGGGC              TTTTTTTTGCTCGCA 100 67
LOY33_RS07055 1559394 .. 1559408 +  -5.6  -3.53224   CGCGATGCGCTGGCG               CTGGCC GCC GGACAG               TTTCACGCCACGCTC  54 412
LOY33_RS07080 NONE
LOY33_RS07085 1564409 .. 1564436 + -17.8  -5.28778   CCTTTGGGTGTACCT        GCCCGGTCAGAC ACTG GTTTGACCGGGC         TTTTTTGTGGGTGGT 100 77
LOY33_RS07090 NONE
LOY33_RS07095 1566417 .. 1566437 +  -4.6  -2.72043   AGACCCGTTGAGCCT            GCTGGCAC CTTGA GTGCAGGC            CTTTCAAAAGCGGTT  44 30
LOY33_RS07100 1567388 .. 1567414 + -12.3  -3.21099   ACCGGCCGGTAGCAG        CCCGGCGCGCAG GTCG CTGC-CGCTGGG         TTGCTGGTACAGGCC  75 29
LOY33_RS07110 1570417 .. 1570434 +  -4.1  -4.30576   GAAGGGCAGCGGCAG             CGGTGAT GCTC ATCAGCG              TTTTCATGGTCGGAC  68 345
LOY33_RS07120 1571056 .. 1571073 +    -4  -3.15544   TGCCGCGATAATGGG             GGTCGC CCTTGA GCGCCC              TTCGTAAGAATACCG  45 116
LOY33_RS07125 1572048 .. 1572104 + -11.5  -2.52464   TGGCGGCCACTACCA GC-GCCGGTTGCAGGCTGGCGCTGAAC TGATT GCTCAACGCC-GCCAGCAGCGGGCCGC TGAGTTGGCCGAGGG  65 80
LOY33_RS07135 1574367 .. 1574399 + -14.4  -4.31329   CGCTAGCGTGCTGCT     GAA-ACCGACGCATT GCGC AATGCGTCGGTATTC      TTTTGCGATTTTTCA 100 272
LOY33_RS07140 1574948 .. 1574970 +  -8.3  -2.62933   TCGTCCATGACCCTC           CACCCCGCT ACCCA GGCGGGGCG           TCCTATGCCAGATTC  53 406
LOY33_RS07155 NONE
LOY33_RS07160 NONE
LOY33_RS07165 1581026 .. 1581059 +  -6.7  -4.30719   CGGTGATGATGTCCA     CCGTGGC-GGTCATGC CCG GGATGATCAGCAACGG     TTTGTTGTCCCCGCC  75 121
LOY33_RS07185 1593807 .. 1593826 + -11.4  -2.71011   CCAGGTAGTCGCGAA            TCCACGGC CCAA GCCGTGGG             TGATTGACCAGCCAT  62 341
        recQ 1596967 .. 1596985 +  -3.9  -3.29144   ATGTAGAAAGGTTGT             TTGTCAT CATTT ATGACGA             TTATGCAGCGCCTGC  47 35
LOY33_RS07205 1597906 .. 1597920 +  -3.4  -3.84712   GTTCGGCCCGCTGCT               CAGGGC CTT GTCCAG               TTTCATGTCCCATTG  56 421
LOY33_RS07215 1600377 .. 1600389 +  -2.6  -3.28712   CGGCAGCAGACACAG                TGCC ACCAC GGCG                TTCTGGCACAGCGCC  44 351
LOY33_RS07225 1602359 .. 1602370 +  -7.2  -3.01712   TATCCTTTGCGTTCA                CCGC AGGA GCGG                 TCTTACCCAAAAGAA  53 488
LOY33_RS07235 1603554 .. 1603568 +  -3.4  -3.53012   GGGTGGCGAAGTTGC               CCGCCG GGC CGATGG               TTTCGCCCAGGCCCG  49 101
LOY33_RS07245 1605980 .. 1605990 +  -3.2  -2.57132   TTGAAGCGCACGGCA                 TTGC GCA GCAG                 GTTGTCCAGCGCACG  39 452
LOY33_RS07280 NONE
LOY33_RS07285 1611529 .. 1611551 +  -3.2  -3.13522   GCCGGTGGACCTGTA           CATCCCGCCC GAT GCGCTGGAAG           TGTTCCTCGAAGCCT  43 138
LOY33_RS07290 NONE
        scpB 1613090 .. 1613102 +  -6.9  -2.90194   CTGTGGTGCGTTTGT                CGTCG GTT CGGCG                TATGATTCGCGACCT  53 89
        rluB 1614257 .. 1614274 + -11.3  -5.39755   TAAGCGCTCACACAA             GCCAACC TTCG GGTTGGC              TTTTTTGTGCTTGTG 100 38
LOY33_RS07305 1616390 .. 1616408 + -13.1   -5.1417   GATGCTGCAATGAAA             GCCCGGC CTTGT GCCGGGC             TTTTTGGTTTTGTGC 100 47
        arfB NONE
LOY33_RS07340 1622965 .. 1622978 +  -5.3  -3.59262   ACGTTCGGGACTTCG               GTCAT GGAA ATGAC                TTTGGCGATGTCCAG  54 228
         acs 1625483 .. 1625541 + -20.3  -3.12351   GAACCTGGCGTCGGC CTGAGTC-ATCGCCGGCAGGCCGGTCCT TGTA GGGGTCGGCCTGCCGGCGATAGGGCCGG TTGGCTGTCAGCACA 100 22
LOY33_RS07355 1626829 .. 1626863 +  -9.3   -5.1675   GTTTCACCTGTTCAA     TGGTGCAAGCAGCAG AAGCG CTGAGGTTTGCACCA     TTTTTTCATCCCTAA 100 50
LOY33_RS07360 NONE
LOY33_RS07365 1628306 .. 1628326 +  -3.2  -3.85698   ACTTTTTCGCCCCGG           GCG-CAGGC CCGG GACTGACGC            TTTGTGAGAACCGAC  55 52
LOY33_RS07370 1629164 .. 1629177 +  -8.1   -4.3739   AATAGGGCATGCTGC               GCCTC GATC GAGGC                TTTTCTCCCAGACTC  77 80
        argR 1630473 .. 1630495 +  -6.8  -3.36273   TTACAATCCCCCCAT           CGCTCGCCAG TTC CAGGCAGGCG           TTCCTCTTCAGGAGA  58 301
LOY33_RS07380 1631787 .. 1631813 + -15.8  -3.78934   AGCGAACCGATTCTG         GTGGCCCGTGCC CGT GGCACGTGCCGC         TTCTTCTGCGCCGGC 100 76
        aruF 1632885 .. 1632906 +    -3  -2.71712   CTGGTCGCGGTCTGA           TTG-CCTGG CTACC CCAGGTCGA           GTTTCGCAGGGGCCA  41 26
        astA NONE
        astD NONE
        astB NONE
LOY33_RS07405 NONE
        astE 1638524 .. 1638559 +  -7.4  -3.53012   CGATGCCGGCGTAAC    GGCCGCTGCGGGCCAG CAGC TTGGCGTGCAGCGGGA     TTTCGAAGGCACCGC  60 408
        alaS 1641817 .. 1641853 + -17.4  -3.33605   ACAGGGTGTCTGAAG   CGCCCGGTGGCCCGCCAT CCG ATGGCGGGCC-CT-GGCG   TTGGTAATTGTGTTT  93 28
LOY33_RS07425 1643150 .. 1643181 + -14.4  -4.56597   AGTAAGCGTTGTGCT      CAC-TGGGGCGCGGC CTG GCCGCGCCCTTCGTG      TTTTTGAACGGCACA 100 36
        csrA 1643548 .. 1643561 +  -2.3  -2.87146   AAAAGGGTTTGCAAA               CGGGG AAGG CTCTG                GTTATTATACGCCCC  40 62
LOY33_RS07435 NONE
LOY33_RS07440 1643873 .. 1643887 +    -5  -3.11732   CATACGACGAAGTAG               TTTCCA GTC TGGAAG               TTGCCTCAGTTTCAA  47 39
LOY33_RS07445 1644024 .. 1644044 +  -6.9  -3.66178   CACCATACGACGAAG            CAGTTTCCA GTC TGGAAGTTG            TTTCAGCTTCAACCA  63 36
LOY33_RS07450 1644172 .. 1644204 + -18.5  -4.28049   CGAGTGCACCATACA      ACAGAAGGCCCGCTT TTT GAGCGGGCCTTCTGC      TTTTCGGCTTTTCAC 100 30
        mgtE 1646014 .. 1646029 + -10.4  -5.28176   CAAGGCATAAAAAAA              GCCAGC GAAA GCTGGC               TTTTTTGTGCGTGGG 100 46
        phnN 1647389 .. 1647419 +    -6  -2.91912   TAACATGCTCGCCGT       TCCGTATGGCGGGC CAT GTACGCCAGACGCA       TGTCTCAGTAGCTCA  51 103
LOY33_RS07470 1647657 .. 1647694 + -11.9  -2.66634   GAATTCCGATTTAAC   ATCCGCTGCGAGCTGGC GCCT GCAGGCTCGCAGCGTAC    TCATGTAGTCCAATG  69 185
LOY33_RS07475 1648639 .. 1648653 +  -2.8  -2.52946   AGTCATTTGAGAATG               CTGAGC CAA GTTTAG               GGTTTTCTCAAAACC  39 510
LOY33_RS07480 1650283 .. 1650293 +  -5.4  -3.20432   TGAAGAAGACGATTA                 GGTT AGC AACC                 TTCGATTGGGTCTGT  51 92
LOY33_RS07485 NONE
LOY33_RS07490 1650483 .. 1650523 + -10.7  -3.88559   TGCTAATTTGTCAAA  GCTTAGAAATGAATATTCG CGT CGAATATTGATTTCTGAAC  TTTATCAGAATCGTT  77 48
LOY33_RS07495 1653696 .. 1653709 +  -5.3  -4.15222   TGTCTGAACAAGACC               TTCTG GCAA CAGAA                TTTCTTGACGACCAT  66 147
         rrf 1653837 .. 1653872 + -19.2  -3.53733   GTCAAGATTAAATTC    CGAAACCCCTATCTGC ATCT GCAGGTAGGGGTTTTG     TCTTTGTGGGCTGAA 100 34
LOY33_RS07510 1655818 .. 1655842 + -20.1   -2.8474   CAGATCGCCTGATGC          CTGGGCGTCGA TGA TCGACGCCCAG          TGGTTCTGGCTACAG 100 29
        bkdR 1661612 .. 1661623 +  -7.2  -3.63515   TATGTTGTTCGGGTC                GCCG TTCG CGGC                 TTGTTAAAAATAACA  60 121
LOY33_RS07540 1663036 .. 1663074 + -14.1  -5.60993   CAGGGTAAGCAGAGG  CAGGTGGCAG-CCATGAT CGAG ATCATGGTTTGTCACCTG   TTTTTTTATGCCCGG 100 68
LOY33_RS07545 1664563 .. 1664579 + -15.1  -3.57792   GTTCCGCTGGCAGGC              GGGGCGC CAG GCGCCCC              TTTGCGGATGAATCC  88 81
LOY33_RS07570 NONE
        cheR 1669107 .. 1669130 + -18.2  -4.72986   AAGTGAAACGAAAAA          GGCCGGTGTC GCGA GACACCGGCC           TTTTTCATGCAGCTG 100 35
        flgB NONE
        flgC NONE
        flgD NONE
        flgE NONE
LOY33_RS07610 1675425 .. 1675440 +  -3.9  -4.11751   CAGCCCCCGCATTGA              CGGGG CTTTAC CCCTG               TTTTGCAGAGTTGGT  62 114
LOY33_RS07615 NONE
        flgG 1677114 .. 1677130 + -11.5  -3.03124   AAGTGAAGCCCCAGG              GGCGCTG ATG CGGCGCC              TGTTACACCGTGAGG  69 39
        flgH NONE
LOY33_RS07630 NONE
        flgJ NONE
        flgK 1682219 .. 1682231 +  -4.8  -2.73441   GGAAATTTTCTCCAC                GCTG ATCAA CAGC                CTTTAAGGAGTCGTA  44 7
LOY33_RS07645 1683857 .. 1683884 + -15.5  -4.39426   TTTTCTGCAGTACCC        ACCCGGGGGCG CTCAGT CGCCCCCGGGG         TTTTCTCCAGGTCTA 100 48
LOY33_RS07650 NONE
LOY33_RS07655 1690326 .. 1690344 +  -9.5  -5.24129   GCGGGTTTTGCAAAA             GCCGGGT TTCGT GCCCGGC             TTTTTTGTGCCCGAC 100 45
        rffA 1691701 .. 1691719 +  -3.8  -3.59262   CTGACAGCAGCACGC             CCCTAATC AGA GATTGGAG             TTTCACCATGTCGCA  51 37
LOY33_RS07665 1695278 .. 1695306 +  -5.8  -4.07885   GCGCCTGGCGCTGTG        GCGCGCGGCCTG GCTGG CGGGCTGAGCGG        TTTTGCAGGGCGGTC  64 1
LOY33_RS07670 1696504 .. 1696524 + -11.1  -5.89947   CTCCCGTCTACAGAA            GCGCTGCCT TGA AGGTGGCGC            TTTTTTTTGCCTTTG 100 47
LOY33_RS07675 1697616 .. 1697648 + -19.9  -4.27316   CGCCTGATGGTTATC      GGCGGGGGAGTGC ACCTGTG GCGCTCCCCCGCC      TTTTGCATTGAGAGG 100 42
LOY33_RS07680 1698038 .. 1698068 +    -3  -3.16564   AACGCCAAGGTCTGA       TGCTGGCGTCCGAG CAG CACGTTCGCTAGCC       TTGATCGGCTAGGGG  43 26
        fliD 1699534 .. 1699574 + -19.2  -3.08314   ATAGCAGGGGCCGCA AAAAAGCCCGGCAGCACCC CTTC GGGTGCT-CCGGGCTTTTC  GTTTTCGGGGTTAAA 100 40
        fliS NONE
LOY33_RS07695 1700571 .. 1700596 +    -6  -2.84841   CGATGACGATGACGC         TCGCCGCCGC GACCTG GCGGTGGTGC          TGAATTTTCTTGGCG  49 242
        fleQ 1702077 .. 1702092 +    -6  -3.53012   CCACAGGGCTGTAAA              GCCTGC CCTT GCTGGC               TTTGGGCGGCGCGCC  58 100
LOY33_RS07710 NONE
LOY33_RS07715 1704800 .. 1704814 +  -3.5  -5.15167   GCCAGCGGCGTGTGA              CG-CCG TAAC CGGTCG               TTTTTGTTGGTCCTG  78 26
        fliE NONE
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 1710747 .. 1710776 +  -2.8  -3.14211   AATTGTCCCAGCGAT       TGCCGCGCCACGA TCGCT TC-TAGCACGGCA       TTGGTCGGCGCAGGT  43 3
LOY33_RS07750 NONE
LOY33_RS07755 1712856 .. 1712874 +  -2.2  -2.75957   GGCCCGCGTGGAGTT             CGCCTGGG TGG CTCTGGCA             TAATTGAACTTGATC  39 4
LOY33_RS07760 1713265 .. 1713285 +  -5.3  -3.09648   GGCCAGGCATCCTGT            GTAGCGCAA ACC TGGCGCGAC            TCTTGCAGTCTCTTC  49 22
LOY33_RS07765 NONE
        fliL NONE
        fliM NONE
        fliN 1716847 .. 1716864 +  -9.1  -2.64616   GTCTTCTGCAAGCAG             GGCTGAC CGGG GTCGGCC              TGCTCTGGCTCGACC  57 48
        fliO NONE
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB NONE
        flhA NONE
        flhF 1723897 .. 1723907 +  -3.2  -3.39449   GTACCTACATCAATG                 GTCT GCC AGGC                 ATTTTTCAGGTGTTG  47 64
        fleN NONE
        fliA NONE
LOY33_RS07830 1726032 .. 1726044 +  -6.2  -2.57132   TCAATAGCTGAGGTA                CGCC ACGGG GGCG                CTTATGGAGCAAAAA  48 30
LOY33_RS07835 1726819 .. 1726829 +  -3.2  -4.56597   GTCGACGATCTGCTG                 TCCA GCC TGGG                 TTTTTAGGGAGCACG  69 8
LOY33_RS07840 1729060 .. 1729075 +    -9  -2.79183   AGCATGCTCAAGCGT              TACGCC GCTC GGCGTA               TCTGATCCCGGTGGC  58 5
LOY33_RS07845 1730237 .. 1730253 +  -5.1  -3.07233   GGCACCTGGTAGAGG              CGTGCAT CTG ATGGACG              TGTTGAGCCTTATCG  47 15
LOY33_RS07850 NONE
        motD NONE
LOY33_RS07860 NONE
LOY33_RS07865 1733639 .. 1733650 +  -7.2  -4.14392   CGCACTGAGTACACC                GCCG AGAA CGGC                 TTTTGAGGGTTAGGG  71 61
LOY33_RS07870 NONE
LOY33_RS07875 1734610 .. 1734624 +  -9.2  -3.28712   TTCGGGGTAATGTCG               CGCTCC TGC GGGGCG               TTGTCCACGAACCCC  61 94
        ccmA NONE
        ccmB NONE
LOY33_RS07900 1738748 .. 1738767 +  -3.4  -2.74784   AAGTGTTGGGCCACC            TGGGGCGG GAGA CCGCACGA             TGAGTTTTGCCAGCT  41 3
        ccmD NONE
        ccmE NONE
LOY33_RS07915 NONE
LOY33_RS07920 NONE
LOY33_RS07925 NONE
        ccmI NONE
LOY33_RS07935 1743959 .. 1743971 +  -6.9  -3.54424   GCGGCGTGCCGGGCG                GCCTG GGA CGGGC                TTTCGCCCAGTAAGC  60 0
LOY33_RS07940 NONE
LOY33_RS07945 1745951 .. 1745976 +  -4.7  -3.12999   TGCCCACCACGCGTT         CATCCATCTCG TTGC TGGCATGGATG          TTCACTGTCAGCTCG  47 500
LOY33_RS07955 NONE
LOY33_RS07960 1747962 .. 1747972 +  -3.2  -4.61807   GCAAGGACATTTTGC                 GTGC TGC GTAC                 TTTCTGTTTTCTTTT  69 106
LOY33_RS07965 NONE
LOY33_RS07970 NONE
LOY33_RS07975 1750132 .. 1750175 + -11.6  -3.14132   AAGGGATGAGCACCT GGGTGGCGCCACCCTGCAGG CGTA CCTGGACGGTGTCGATACCC TTGCTGCGACAGCCC  66 115
LOY33_RS07995 1753238 .. 1753248 +  -5.4  -2.69598   TGCGTGAAGCTTGCC                 GCTA AAA TAGC                 CCTTTTTGTCCCAGT  46 71
LOY33_RS08000 1754181 .. 1754195 +  -6.4  -3.17622   TGAAGGCGCTGGTGT               TTCGCC AGG GGTGAA               TCTGTTGTGCCAGTG  54 12
LOY33_RS08065 1771432 .. 1771452 +  -8.3  -3.53811   ACGGGGTGGAGGCCT            GCATGATCG GCT CGATGATGC            TTTCGAGCACCTCGC  62 523
LOY33_RS08075 1772682 .. 1772702 + -11.1  -3.01712   GGGCAAGCTCTGGAA            GGCCATCCG GGG CTGATGGCC            TCTTCGCCGGCAAGG  68 10
        uraH 1780477 .. 1780496 +  -8.5  -5.81412   TCTTCGTAGGTCCTT            GCCCGCT CTCACT GGCGGGC             TTTTTTTTGCCTCGG 100 57
LOY33_RS08125 1783120 .. 1783134 +  -4.2  -3.28791   GAGCCCGCTCCCACA               GGATTG TCT CGGTCC               TTGTGGGAGCGGGCT  47 67
        aqpZ 1783976 .. 1784012 +  -6.6  -3.56092   GGCCTGTTTCGAACG   CCTTAG-CGCT-GGTGCA CGC TGCGCCCGGCGGCAAAGG   TTTCGCGAATGGTAC  58 20
LOY33_RS08155 NONE
         smc 1794667 .. 1794687 +  -6.9  -4.67168   GTTGGCGCCACGTTT            TAAAGGGGT TTA AACCCTTTA            TTTTTCAGCATTTTT  79 174
        zipA 1795668 .. 1795686 + -10.3  -4.54727   CGATTTGAACGCCAA             GAGCAGC CCCGA GCTGCTC             TTTTGCTTTGCAAGA  88 102
        ligA NONE
LOY33_RS08175 1799446 .. 1799465 +  -5.6  -2.86271   CCGGTACAATGGCCC            CGCTCGCT GCCA GGCGAGCA             TCGTTATGGTGACCC  47 88
         ffs 1799650 .. 1799661 +  -5.8  -3.75153   CCCCCGAATACGCAT                GCAG TGCA CTGC                 TTTCCCTTCGCGCGC  58 98
LOY33_RS08190 1800934 .. 1800956 +  -5.4  -2.71681   CGAAGTAGGCCTTGG           CGGCTCCGGA GAA TTCGCCGCCG           TCCTTGGCGAAGTTG  45 204
        dnaX NONE
LOY33_RS08245 1818685 .. 1818727 + -11.3  -4.74103   CATTGCCTGCGTGAC CCTCGGTGGGAGC-ACAGCC AGTC GGTTGTCGCTCCCATCGTCG TTTTTCCGTTCAACC  95 43
        recR 1819751 .. 1819785 +  -3.4  -3.66018   CCAGCACATCGGCCG     GCAGCTTGCCCTGCTT GCG AAACAGGATCAGCGGC     TTGTTGAGCTGGTGG  53 408
LOY33_RS08265 1821747 .. 1821757 +  -4.6  -3.54602   TGGGCAACTGCGAGG                 CGCC GAG GGTG                 TTCTGGTATTCGTTC  52 344
LOY33_RS08340 1836318 .. 1836335 +  -3.3   -3.6682   TCCCCTGCAGGAGCC             GGCCTTG CCGG CGAAGCC              TTTGAATCAGTCGCG  52 83
LOY33_RS08355 NONE
LOY33_RS08360 1839495 .. 1839520 +  -8.3  -2.57132   TTCACCAGGGTCGGC         GACA-CGCCCAG CTC CTTGGCGATGTC         CTTCTGCGGCACGCC  52 248
LOY33_RS08370 1853278 .. 1853303 + -21.9  -2.79321   CCATGCTTCGCTCAT         GCGCGCCAGCC TTCG GGCTGGCGCGC          TGCTGTTCATCTGCA 100 71
LOY33_RS08375 1854842 .. 1854865 +   -11  -3.64703   GGCTGACAACACCGA          TCCTGCAGGC CATG GCCTGTGGGA           TTTGCATCGCCAGCC  78 101
LOY33_RS08395 NONE
LOY33_RS08400 NONE
LOY33_RS08405 1860970 .. 1860996 +  -7.9  -3.23638   AACCTTCTAGAAGAC         CGCCCCGCG CGCTAAATC CGCAGGGCG         TTGATGCGTCTTTCA  59 31
LOY33_RS08410 1862599 .. 1862650 +  -6.4   -2.7535   TGCAGCACGGTGAGG CAC-GAGGTGGGTTGGCTGTCGGCG ATG CGCCGGTAGCTGACCTGCGGCAGGG TGATGTGTTGCAGCA  47 123
LOY33_RS08420 1865165 .. 1865188 + -14.6  -4.85782   CGGCGCAACTGAAAA          GCCCCAG-GCG TTG CGCACTGGGGC          TTTGTTTTTGCCGAC 100 60
LOY33_RS08480 NONE
LOY33_RS08485 1896002 .. 1896029 + -21.4  -3.13743   GCGCGTCCGTGTTGC        CGGAGCCCATCG ACGT CGATGGGCTCCG         TTCGCTGTGACGTTT 100 42
LOY33_RS08490 1898846 .. 1898863 +  -6.2  -5.24531   CACTCTTTTCGAAAA             GCCCGT TCTGAT GCGGGC              TTTTTTGTGGGCGGT  90 45
LOY33_RS08495 NONE
LOY33_RS08500 NONE
LOY33_RS08505 1903112 .. 1903129 + -12.7  -4.72272   CAACGCCACAAAAAA             GCCCGCA ACGC TGCGGGC              TTTTTCATGGGCGCC 100 45
LOY33_RS08540 1933234 .. 1933256 +  -6.2  -4.11216   GGCGCTGGCGATCGA           GGCCGTCGAT GCT GTTGAGGGCC           TTTTCGACATCGGCA  66 265
LOY33_RS08560 1938307 .. 1938323 +  -5.1  -3.56594   GTCAGCAACAAACAA              TTGAGGC TGC GCCTTGA              TTTCCCGGCATTTCC  53 48
LOY33_RS08565 NONE
LOY33_RS08570 1940357 .. 1940410 + -18.4  -2.93878   ACCGTTTGCTCGAAC GCCTTCACGAAAAAGCCCCCAGCGCC GCAA GGCG-TGGGGGCTTTTTT-TGTGGGC TGTACTTACATGTTC 100 42
LOY33_RS08580 NONE
LOY33_RS08585 1944327 .. 1944346 + -11.4  -5.63517   CTTCACTTATAAAGA            GCCCGGTC TTTT GATCGGGC             TTTTTTATTTCGCGA 100 49
LOY33_RS08590 NONE
LOY33_RS08595 NONE
LOY33_RS08600 1946392 .. 1946408 + -12.3  -5.60993   CGAGGTAAACAAAAA              CCGGTGA TAG TCACCGG              TTTTTTTATGCCGCA 100 44
LOY33_RS08605 NONE
LOY33_RS08610 NONE
LOY33_RS08615 NONE
LOY33_RS08620 1949715 .. 1949732 + -12.7  -4.57882   TTACGCAACAAAAAA             GGCTGCC CGAG GGCAGCC              TTTCTTGTTGTTGCA 100 112
        sdhC NONE
        sdhD 1952131 .. 1952150 +  -2.8  -2.50935   TTCGTCTGGGGTGTG            CAGATTCT CTGG GGTATCTG             ATTCATGGCTAACAT  39 5
        sdhA NONE
LOY33_RS08645 1954622 .. 1954640 +  -6.6  -2.72227   CCACGTACGTAACAT             GCTGCTGC AAA GCGGCACC             TGATTCAAAAGTGTT  49 4
LOY33_RS08650 NONE
        odhB 1959006 .. 1959022 +  -2.2  -3.09492   AGGCTGCAAGCGACA              AGCTTC GAGCA GAAGCG              TGTTCGCCTTGCCGC  41 52
        lpdA 1960522 .. 1960545 +  -6.7  -3.09878   TTAAACAATAAGAAA          C-CACGGCGG ACGGC CCGTCGTGAG          TCTTGCGTGCATGGC  52 37
        sucC NONE
        sucD 1962767 .. 1962784 + -12.7  -4.18303   CCACGCTTCGGCAAA             GGCCACC CTCG GGTGGCC              TTTGTGCTTTCTGGT  93 56
        brnQ 1964464 .. 1964489 + -20.5   -4.8048   GCCAGCCTCTGAAGA         GCCCCGCATCC ATTC GGATGCGGGGC          TTTTTCGTCTCGGGG 100 88
LOY33_RS08680 NONE
LOY33_RS08685 1965729 .. 1965744 + -10.4  -5.26875   CCTGACATGAAAAAA              CCCGAC CTGA GTCGGG               TTTTTTCATTAAAGC 100 36
LOY33_RS08695 NONE
LOY33_RS08700 NONE
        htpG 1969172 .. 1969187 + -11.8  -5.32944   AGCAGTTGCAGGAAA              GCCCGC TTCG GCGGGC               TTTTTTCATTGTGCA 100 40
LOY33_RS08710 1969933 .. 1969944 +  -7.2  -3.08679   GCGGGAAGTGTTCCA                GGCC TGAT GGCC                 TCTTCGCTGGCAAGC  54 19
LOY33_RS08720 1972010 .. 1972037 +  -9.2  -2.87564   TGCAAGCCCCATAGC        CTGC-CGCCATCA ACC TGATGGAGAGCAG        TATGTCGAAGAGTCG  62 57
LOY33_RS08725 1972603 .. 1972623 +  -5.4  -3.04398   TCTAATAAGCACGTC            AGCTGCAT GACCG ATGCAGCG            CTTTTGGAGGGAACC  49 125
LOY33_RS08730 1974364 .. 1974384 +   -14  -3.85698   AGCCGCAAACAAAAA            CGCCCCGA ACCAG TCGGGGCG            TTTCTACAGCAGGGG  93 120
LOY33_RS08760 NONE
LOY33_RS08765 NONE
        sixA NONE
LOY33_RS08775 1983761 .. 1983771 +  -2.4   -2.7169   CTGGGCGACAACCCA                 CCGG CGA CCTG                 ATATTTCTACCAGTT  39 14
LOY33_RS08780 NONE
LOY33_RS08785 NONE
LOY33_RS08790 1985995 .. 1986011 +  -4.3  -3.61506   GACAACCATGACCAA              GCGCGAC ACC GTTGCAC              CTTTTTTCGCCATCG  51 84
LOY33_RS08795 NONE
LOY33_RS08800 1988079 .. 1988112 + -11.7  -3.72592   CCCCCCTCCCGACAA     TCACCGT-CAGCGGCA CCG TGCCGCGGGACGGAGA     TTCTTCATGAGCATT  81 179
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC NONE
LOY33_RS08825 NONE
LOY33_RS08830 1996171 .. 1996181 +  -2.4  -3.53224   TCGACAATGAACGAG                 CCGG CTG CCGA                 TTTCGGCGCGCCGTC  48 283
LOY33_RS08840 NONE
LOY33_RS08845 1998191 .. 1998214 +  -6.6  -2.73364   GTGTTTGGCGCAAAT          GCGGCCTGTGC GCG GCGC-GGCGGC          TGGTTAACATCGCCA  49 46
LOY33_RS08850 1999337 .. 1999349 +  -6.9  -3.98484   AGGGGGCCAATTGCG                CGCGG CTA TCGCG                TTTATAGCTTGAGTT  68 304
LOY33_RS08870 NONE
LOY33_RS08875 2003870 .. 2003888 +   -16  -5.24129   GTTGTGGCAAAAAAA             GGGCCTGC ATT GCAGGCCC             TTTTTTGTGCCCGAC 100 49
LOY33_RS08880 2004838 .. 2004857 +  -2.1  -4.08216   CGCGCAGCATCTTCT            TGCCGTAG GTGTA CT-CGGCG            TTTTCCGAACGGTCA  58 347
LOY33_RS08900 NONE
LOY33_RS08905 NONE
LOY33_RS08910 2010308 .. 2010332 + -18.6  -2.90496   CCGCTTGTGTTTGCA          CGAGGCCCGC TTCAT GCGGGCCTCG          TCGTTTGCGCAGGAC 100 42
LOY33_RS08920 2011472 .. 2011518 + -18.8  -3.53761   GCCTGCTGACACCCT GTTGAAAACGAAAACGCCGGGC ATT GCCCGGCGTTTTCGTTGATGGC TTTCAGCCGCGGTTG 100 41
LOY33_RS08930 2013811 .. 2013825 +  -3.4  -4.12188   TGGCAGGGCGCCGGA               CGGCTC TGC GCGTCG               TTTTGGCGCTGCTAA  60 47
LOY33_RS08935 NONE
        cysB 2015909 .. 2015938 + -11.3  -2.78463   CGCTGTCGATTTCCA       GCGCGGCCACCTG GCTG CGGGTGCCCGGGC        TCTGGTCGCGGCGCT  60 457
        thrH 2017120 .. 2017177 + -35.9  -3.29144   GAGCCTGTAATACCG C-CTTCTCCGGCAAGGCCGGCTCCTGCA CGC TGTAGGAGCCGGCCTTGCCGGCGAAGCG TTCTAGAGGCCCTGC 100 31
LOY33_RS08975 NONE
        prpB NONE
        prpC 2024838 .. 2024854 +  -3.5  -3.39595   GTATGCCATCAGGGG              GACTGCG CAC CGCCGAC              TTATCCGTGATTGAG  47 177
        acnD 2027560 .. 2027571 +  -4.4  -3.83921   GCCGGCAAGGCCGGC                TCCT ACAC AGGA                 TTGTGTTGTATTCCA  59 117
        prpF 2028793 .. 2028812 +  -2.8  -2.90813   TGGCGATACCTTCTA            GAGGC-AGC GGT GCTCGGCTC            TCCTTTCACCCCATG  42 25
        prpD 2030360 .. 2030379 + -16.4  -4.18506   AGAAGACAACAAAAA            GCCCCGCC AATT GGCGGGGC             TTCTTTTCACGCTAA 100 56
LOY33_RS09010 2034114 .. 2034127 +  -2.3   -3.4158   CCCACCGTACCCATC               ACCGT CACC ACGGC                TTCGTACTTTTTAGC  46 255
LOY33_RS09020 2035737 .. 2035748 +  -5.8   -2.6927   ATGCTTGGCCATTCG                CTGC CTGA GCAG                 TAATATCTGCGGCAT  46 162
LOY33_RS09025 NONE
LOY33_RS09030 NONE
LOY33_RS09035 NONE
LOY33_RS09040 2040566 .. 2040583 +  -6.9  -3.72324   TCAGGCAAAGTCGAA             GGGTGCC AGCT GGAACCC              TTGTTCATCCACCTG  63 117
LOY33_RS09055 NONE
        cysS 2045440 .. 2045450 +  -8.2  -3.02511   CCACCTCGATCAGCA                 CGCC CTG GGCG                 TCTTCACGGGCTCGC  55 359
LOY33_RS09080 2049519 .. 2049550 + -11.6  -2.53213   AACAGCAATTGCGCT      G-GCTGGTCGCTGTA GAG TACCGCGGCCAGCGC      TGCCTTGAGCCGTTC  65 192
LOY33_RS09110 NONE
LOY33_RS09115 2056270 .. 2056287 +  -5.5  -2.82834   GTGCTGTAGCATCTG             CAGGCCT CGCC AGGGCTG              TATCGTCATGGCGTG  47 32
LOY33_RS09120 2057341 .. 2057366 +  -7.5  -3.00946   TGCTAGCGCCGGCAG         GTGCCGC-GGGA TTT TCCCAGCGTCGC         TAATTTATCCGCACG  53 35
LOY33_RS09125 NONE
LOY33_RS09130 2058435 .. 2058460 + -17.6  -4.03234   TAGCATCCGACCGGG         CCCGGGCAGC CATCGC GCTGCCCGGG          TTTCTGTCCGCAAGC 100 52
LOY33_RS09135 NONE
LOY33_RS09140 2059600 .. 2059617 +  -2.7  -2.53876   ATGGGCGAGCTTGAT             GGCTA TTTGCCGT TAGCC              TGGATTACAGTACGC  38 40
LOY33_RS09145 2060370 .. 2060392 +  -8.3  -2.98088   GCTGTGTACTGTGGG           GCCCTCGAC CGATA GCCGGGGGC           TGTATGCCTTTACGC  56 63
LOY33_RS09150 2061961 .. 2061971 +  -5.4  -3.43203   TCAGGTCGATGTCCA                 CTAC CGA GTAG                 TTGGTGTTGTGGTAC  53 511
LOY33_RS09185 2069092 .. 2069137 +  -9.7  -2.71712   GTCGACGCGGTGCTC CCAGCGGTC-GGCCCGGCTGC CCATCT GCAGGCGCGCCAGGCC-CTGG CTTTCGAGGGCACGC  55 494
LOY33_RS09195 2070009 .. 2070036 + -19.2   -4.7497   CCAGGCATGAAAAAA        GCCCGGCAAGGT CAAC GCCTTGCCGGGC         TTTTTCATGCCTGCC 100 45
LOY33_RS09210 NONE
LOY33_RS09215 2073591 .. 2073626 + -17.7  -3.29043   CCGCTTCGCCAGCGA    CGTCGGC-TCTGCAGG ACGCA CCTGCAGACGCCGGCG    TTATCGGCGAAGGTT  93 41
LOY33_RS09225 2075126 .. 2075143 +  -7.7  -3.30124   CCGTATACCACGCCA             CCGCC-GA AGA TCAGGCGG             TTGTCGCCGGTCAGG  56 426
LOY33_RS09235 2076343 .. 2076362 + -11.4  -4.98531   GCGGTACACGAAAAA            GGCGATCC GAGA GGGTCGCC             TTTTTCGTTTGGGCC 100 60
LOY33_RS09240 2076577 .. 2076598 + -17.3  -5.30616   GCGGTAACACAAAAA           GGGCGACCC GCAA GGGTCGCCC            TTTTTGTTTGCCTGA 100 60
LOY33_RS09250 2077574 .. 2077589 +    -6  -3.05384   GCGGCACCTGGCATA              GGGCCC AGGC GCGCCC               TTGGCTGGCGAGGGC  52 25
LOY33_RS09265 2080619 .. 2080645 +  -2.8  -4.13767   CCTTTCTCGGGCTGG         CGTCATCGGCAT GAC ACGGCGTTGGCG         TTTTGCCGTCGGCCC  60 12
LOY33_RS09270 2081751 .. 2081761 +  -4.6  -3.25223   TTCCCGCTCCCTTGC                 CGGC GGG GCTG                 TTCCTAGTCTGGGTG  49 57
LOY33_RS09275 2086392 .. 2086428 +  -9.5  -3.35798   GGGCTGTGCAGGCAG    TGGCCAAACCAGTCA TCCAGAT TGACAGCTTTGGCCA    TTGTCGCTGCGCGCT  67 47
LOY33_RS09280 NONE
LOY33_RS09285 2088915 .. 2088933 +  -3.9  -2.70932   CCGCCTCGACGGTGC            CTTGCGCA TGGC TGC-CAAG             TAATTCAGGAGAACC  43 4
LOY33_RS09290 NONE
LOY33_RS09295 NONE
LOY33_RS09300 2092102 .. 2092114 +  -3.3  -4.00042   CCGGCAGGGCGTGAC                GCTGT ACT GCGGC                TTCTTTACTCACAAG  58 59
LOY33_RS09305 2096749 .. 2096769 +  -2.5  -3.14132   CTACCAAATGACGAG            TTGTCCTCT GCC AAAGGGCGA            TTCGTCAGCCGCCCC  41 56
LOY33_RS09310 2098415 .. 2098432 +  -5.5  -3.14132   AAGTAGCATTCGACC             TGCGCCG GCAA CGGTGTA              TTAATAGACGCACCG  49 71
        pqqA 2098559 .. 2098584 + -21.9   -2.6063   CCGTTGATCCCTCTT         GCGCCGGTGCC CCAA GGCACCGGCGC          TGCCTTGTGCATCCC 100 31
LOY33_RS09320 NONE
LOY33_RS09325 2101548 .. 2101582 +  -4.9  -2.71712   TTTGCTATAAAGGCC    GCCC-TCAGGGGAGCG TTGA CGCTCGTTCGAGGGGC     ATTTCGGACAAAACC  44 71
LOY33_RS09330 2102179 .. 2102201 +   -17  -4.45261   CTGTCGTGCCAGCAA           GCCCCGGGTT CAC AGCCCGGGGC           TTTTGCGTTTCTTTG 100 47
LOY33_RS09335 2103957 .. 2103973 +  -5.1  -4.56597   GCTTGATGCAAAACA              GCTATGC CGG GGATAGC              TTTTTCCCGCAAGGG  72 55
LOY33_RS09340 2104366 .. 2104396 +  -5.2  -4.09685   TGGAAAAAACCGACG       CCAGCCGGCACTAC AAT GTAGCGCGGCCGGG       TTTTGCCGGATGCAC  64 137
LOY33_RS09345 NONE
LOY33_RS09350 2105827 .. 2105839 +  -4.1  -3.37522   AAGCCAGAACGGCAA                TTCGA CGG TCGAG                TTCATTCGATCACCT  49 389
LOY33_RS09390 2113754 .. 2113795 +  -8.8  -3.53012   GGCCTGGATGATCCG TGCGGCGTTGT-CGGCGGCCG CAT CGG-CGCCGTGCAGCGTC-CA TTTGCCGCCGGGGAA  62 489
LOY33_RS09400 2114959 .. 2114976 +  -6.9  -2.59822   TCCTTTGGTACCGCA             CCGCTGC CCTT GCGGTGG              ATTGCTGCTTATTAT  50 44
LOY33_RS09405 NONE
LOY33_RS09410 2117701 .. 2117719 +  -3.1  -3.11687   TACACAATGTGCCTT            TC-TGGGC GGTT GCCCACGG             TTGAGTGCTGCTTCA  43 3
LOY33_RS09415 2119603 .. 2119622 + -13.6  -4.93547   CGGGCACATGAAAAA            GGGCAACC TGCG GGTTGCCC             TTTTTCGTTACTTGC 100 42
LOY33_RS09430 2123186 .. 2123196 +  -5.4  -3.20432   TGAAGAAGACGATTA                 GGTT AGC AACC                 TTCGATTGGGTCTGT  51 92
LOY33_RS09435 NONE
LOY33_RS09440 2123386 .. 2123426 + -10.7  -3.88559   TGCTAGTTTGTCAAA  GCTTAGAAATGAATATTCG CAT CGAATATTGATTTCTGAAC  TTTATCAGAATCGTT  77 48
LOY33_RS09445 2126600 .. 2126613 +  -5.3  -4.15222   TGTCTGAACAAGACC               TTCTG GCAA CAGAA                TTTCTTGACGACCAT  66 147
         rrf 2126741 .. 2126776 + -19.2  -3.51934   GTCAAGATTAAATTC    CGAAACCCCTATCTGC ATCT GCAGGTAGGGGTTTTG     TCTTTGTGGGCCGAA 100 34
LOY33_RS09465 NONE
LOY33_RS09470 NONE
LOY33_RS09475 NONE
LOY33_RS09480 2131228 .. 2131247 +    -2    -4.067   AGAGTGACTCGGTCA            CATCGCGA ATGG TCGCCACG             TTGTTGTTGATTTCC  58 138
LOY33_RS09490 2134871 .. 2134889 +  -8.1  -4.56597   CGCCAGGGCGCAGGA             GCTGGGC GCGAG GCTCAGC             TTTTTCGCGGGGGCG  83 43
LOY33_RS09515 2142420 .. 2142462 +  -4.1  -4.16842   AGCAGCTTGTCAGAC TCTTCGATCAGCGCCTGCAG TTCG CTGAAGGC-CTGATCCTTGA TTTGTTCGGCATCGG  65 339
LOY33_RS09525 2143214 .. 2143225 +  -5.8  -3.53811   CGTTTCATTGGGGTT                CTGC ACCC GCAG                 TTTCACCGCCATGCG  54 352
LOY33_RS09535 2143885 .. 2143900 +    -4  -3.08992   GATCGCTTGGCCCAC              TGCAAGG AAC CCT-GCA              TGTCTTCACGTACCT  45 39
LOY33_RS09540 2145034 .. 2145062 +  -4.4  -3.53012   GCGCTGCTGAAGGTG       GGCC-TGACGCAG TAAG CGGCGGCGCGGCC        TTTGCCGGCAAGGCC  53 11
        zapE 2146436 .. 2146464 +  -6.8  -3.31144   ACAGCAGCGACCACT       GGC-CA-TAGCGCT GGT AGCGCTGCTGGGCC       TTGTCCAGCTGGGCC  54 199
LOY33_RS09560 2148544 .. 2148556 +  -3.3  -3.55444   AAAGCCCGAGCCCAA                GGCCT GAT AGCCC                TTTGCCCGCTGCCCC  49 19
LOY33_RS09565 NONE
LOY33_RS09570 2149649 .. 2149684 +  -3.8  -3.64609   CAGCCCGCGCGAGGC    GCGGCCGACCAGCAACG GGT CGG-GCTGGTGGGCGAC    TTTCGGGTCCTTGTC  54 112
LOY33_RS09595 2155178 .. 2155204 +    -5  -4.86731   GCCCCCTCGCGATAC         AAAGCCCCCTCG TCT TGGGCGGGCTTC         TTTTATTTCAACAGG  76 237
LOY33_RS09600 NONE
LOY33_RS09610 2158331 .. 2158342 +  -2.2  -2.60496   CGCCATAGCAGCTAT                G-CGC GGC GCGGC                GTGTTTCAGCGGCCA  38 33
LOY33_RS09615 2159911 .. 2159927 +  -2.9  -4.08767   TGAAAAGTACAACCT              TGCCTCT GGA AGGTGCA              TTTTCCCCCCGTCAC  58 115
LOY33_RS09620 2161229 .. 2161255 +  -8.7  -3.16971   ATAACAACAACGTAC        GGCTGCCCTGGC GGCA GCCGGGG-AGTC         TTGCATGTCTACTGA  60 57
LOY33_RS09625 2162678 .. 2162726 +  -3.8  -5.58209   TGTCGGTGGTTTCTG TAGGGGC--CGGCCT-TGCCGGC GAAGCA GCCGGCACGGGCCTAAGCCCCGG TTTTTTTCGCTTTGG  89 499
LOY33_RS09645 2168038 .. 2168048 +  -2.4  -4.33928   CTTGCCCCGCGATGG                 CTGC GAC GCCG                 TTTGTGTTTGAGGTA  62 96
LOY33_RS09650 2169581 .. 2169616 +  -7.4  -3.36256   AGCAACTGCTCAGGC    GCGCGGGGGAGCAG CACACCGC CTGAGCCCACGCGC     ATTTTTAAGGATCTG  58 0
LOY33_RS09655 2170732 .. 2170745 +  -4.5  -4.64157   AGCAACGACGCGGAG               TCGGG TGCC TCCGA                TTTTCTGCTTGTTTC  72 183
LOY33_RS09660 2172462 .. 2172486 + -11.3  -4.62471   CATCGAGCTGAGCCA          AGCGCCCTGGC TGT GCTGGGGCGCA          TTTTTAAGGCTTGCC  93 86
LOY33_RS09665 NONE
LOY33_RS09670 NONE
LOY33_RS09675 2178411 .. 2178455 +  -4.8   -3.0127   CAACCTGTTCCAGTA GGCGTGC-CCGCGTTTTCAGG TTTG CCTGATGGCACGGGGCCCGGC TGTATCGTTCAATGG  46 25
LOY33_RS09680 2179264 .. 2179277 +  -5.2  -3.78778   CGATCAGCGGGTAGC               CGGC CAGCAC GCCG                TTCTTCATCTGCTCC  60 448
LOY33_RS09720 2187671 .. 2187700 +  -6.3  -3.66178   GCTGTAGTTACCCTG       GCTGGTCAGCAGG GTGA CCTTCTGGCCGGA        TTTGAGGTTGCCGAC  59 513
LOY33_RS09730 NONE
LOY33_RS09735 2189684 .. 2189727 +   -13  -4.18018   GGCTCTTGAACAGCT GCACCTGCGCGGTGGCGGCCG CGT CGAGC-CCGCCGTGCTGGTGC TTTTGCATCAGGCGG  91 424
LOY33_RS09745 NONE
LOY33_RS09750 2192255 .. 2192271 + -11.5  -3.02144   GCCCAGAATCAGCGG              CCCGGCC AGC GGCTGGG              TGTTGCGCAGGCTGA  65 276
        uvrY 2207702 .. 2207715 +  -6.7  -2.85351   CGTGCGCCACGGTAT               GGTTG ACGC CAACC                TCTGATATGACCCCA  49 7
        uvrC NONE
        pgsA NONE
LOY33_RS09825 2210326 .. 2210345 + -13.6  -5.26875   ATTCGTCAGAAAGAA            GGGCCACT GAAA AGTGGCCC             TTTTTTCGTTGCGCA 100 72
LOY33_RS09840 NONE
LOY33_RS09845 NONE
LOY33_RS09850 2218668 .. 2218683 + -10.4  -3.15579   TGCAGTCATGGCGCG              GGCAGC GTAC GCTGCC               TTGCTGCAAGGTTGG  66 59
LOY33_RS09855 2219824 .. 2219842 +  -5.2  -4.57837   CGAGATACGTGCCTT             GGCACGGA ATT TTCATGCC             TTTTTCGAACGCTGT  75 70
LOY33_RS09860 2220221 .. 2220245 + -13.6  -2.52623   AGCCGGCTTTGCCGG         CGAAGCGCCGC GCTC GCGGCGCT-CG          ATCTTGTGACCGGCA  74 98
LOY33_RS09870 2222343 .. 2222377 +  -2.2   -3.4331   AAAAAGAGCAAAAAA     AGGGCGGATTTATT ACATTAA AATAAATTCGCCAA     CTTTTTAATAAAAAT  46 50
LOY33_RS09880 NONE
LOY33_RS09885 2226072 .. 2226124 +  -2.8   -3.3323   GGCAAGCGTGCGGTG CGTTAAGGTCAA-ACTCCACTGCTGC ACT GC-GCAAAAGGGTATTGACCTTAAAG TTGACTTTAATCTTA  47 20
LOY33_RS09890 2227832 .. 2227844 +  -5.5  -3.75738   CGGCGGCGTGGGCAC                GCTGT GCA ACGGC                TTGTTCGTAGTCGTC  57 408
LOY33_RS09905 2231404 .. 2231431 + -12.8  -3.66654   ATGCCTGCCTTTGTG        CAAGCAACGTAG CTGG CTACGTTGCCTG         TTTGGGCTTCCAGTA  84 46
        katG 2236036 .. 2236047 +  -7.2  -2.90194   GCTCAACCTGCACAT                GCCG GGCA CGGC                 TGTGCTTGACCACAT  50 352
LOY33_RS09950 2242395 .. 2242416 + -17.3  -6.11644   CCATGACGAAAAAGA           CCAGGGCCG CAAA CGGCCCTGG            TTTTTTTTTGCCTGC 100 47
LOY33_RS09955 2244625 .. 2244640 +  -2.5  -3.55444   TGCTCGGCGCAGAAG              TCCAG CACCTC CTGGG               TTTCGGCGATGCCGC  48 171
LOY33_RS09970 NONE
LOY33_RS09975 2249196 .. 2249231 + -19.8  -3.14132   CCCCTTCGCCAGCAA    GGCTGGCTCCTGCACC AATC GTTGTAGGAGCCAGCC     TTGCTGGCGAAAGGG 100 46
LOY33_RS09990 2253454 .. 2253471 +  -7.7  -3.13403   ACTGCGCCTCGGTCT             CCACC-CC CTC GGCGGTGG             TGTTGATCAGCAGGC  54 177
LOY33_RS10010 NONE
LOY33_RS10015 2263031 .. 2263054 + -14.6  -5.27335   CTCCATTATTGAAAG          CCCCGCAGAT TAAC GTCTGCGGGG           TTTTTATTTGGGCGA 100 35
LOY33_RS10025 NONE
LOY33_RS10030 2265192 .. 2265204 +  -4.7  -3.90048   CCCATATCCGTTAAG                GACCC ATT GGGCC                TCTTTTTGGGCGACC  61 425
LOY33_RS10040 2266214 .. 2266225 +  -2.2  -3.20723   TCTTGAATCCATCGC                TGTG GTAG CGCA                 TTCGATTCATCCGCC  44 155
LOY33_RS10045 2267099 .. 2267133 + -13.6  -2.62184   ATGCCAGGGTCGCCA     CATGCGCAGGCTCATT GAG GATGAGGCTGCGCAGG     TCCTGTGCGAACCGG  67 508
LOY33_RS10055 2268592 .. 2268602 +  -8.2  -3.07291   GGACAAGCAGGGCGG                 CGCC CAG GGCG                 TTCCATACGGTCATT  55 340
LOY33_RS10080 2270912 .. 2270922 +  -2.4  -4.07568   CACGCACTGTGCCAT                 GGCC ATG GGCA                 TTTTCAAGGGCGCGA  56 519
LOY33_RS10095 NONE
LOY33_RS10100 2272745 .. 2272755 +  -6.8  -3.29461   GCCCTGAGCGCATCT                 CCAG GTT CTGG                 TTCTCGCGCCGATTC  54 220
LOY33_RS10115 2274115 .. 2274127 +  -3.4  -3.30771   TCGTGGGTAGTGTTC                GTCA AGCAG TGAC                TTCTGCAGGCTGTGC  45 14
LOY33_RS10120 NONE
LOY33_RS10125 NONE
LOY33_RS10175 NONE
LOY33_RS10180 NONE
LOY33_RS10185 2285199 .. 2285226 +  -6.9  -3.81027   GCGGTAGCTGCACAG        GCCGGGTGTGC GCGGTG GCACAGCCGTC         TTTCCCTTCATTAAA  66 321
LOY33_RS10230 2291333 .. 2291349 +  -3.7  -4.03183   GCGCTGGCCGGATAG              GCCTA GTATCGG TAGGC              TTATATTTTATAAGT  60 108
LOY33_RS10235 NONE
LOY33_RS10240 2292971 .. 2293010 +   -23  -3.91716   TAGAACGCTCGCCCA  TCCGCGTATACAGGCCTG CCTG CGGGCCTGGATACGCGGA   TTATTTGCAACCTGC 100 38
        galU 2294020 .. 2294035 + -10.4  -5.72622   CGGTTGCGTCACAAA              GCCACC TTCG GGTGGC               TTTTTTGTTTATGGG 100 52
        gorA NONE
        ahpC 2296285 .. 2296314 + -15.7  -5.28826   CTGTCCCGCCCCGCA       AAACGCCCGGGCG ACTC TGCCCGGGCGTTG        TTTTTTCTACCGTTT 100 81
        ahpF 2297945 .. 2297994 + -22.3  -3.01712   GGCCTGTGACGGTGC AACAACGCAAAAGCCCTGACAGG TCAG CCTGTCAGGGCTTTTGCGTGGCC TATTCGAACAGCGAC 100 61
LOY33_RS10280 NONE
        cobF 2302086 .. 2302111 +   -14  -3.20382   AGCAGCTGGCGCCCG         TCGCGCTGGG CCTGCT CCCAGCGCGG          TTGCTCGCTGTAGAG  73 214
LOY33_RS10300 NONE
LOY33_RS10305 NONE
LOY33_RS10310 NONE
LOY33_RS10315 2310018 .. 2310036 +  -3.7  -2.62983   GCGCGCAGCAGGCAA             CCTCTGC GTGAG GCCGGGG             TCGTATAGCGATCCC  42 15
LOY33_RS10320 2310504 .. 2310541 +  -4.6  -4.18018   CAGCGTCCAGCGCAC   CGGTCTGCAGGGTGCG CTCTAT CGCCCCCAGCAGCATG    TTTTCCATCAGCGCC  64 68
LOY33_RS10340 2314735 .. 2314757 +  -4.9  -3.33696   TCGTGCCAGCCGGCA          TGGCGGTCGCG GTC CGC-ACC-CCA          TTGCTTGACCAGCAG  51 427
LOY33_RS10350 NONE
LOY33_RS10355 2316427 .. 2316454 +  -3.3  -3.28637   GGCGGCAGGTGCAGG        GGTGATGCGCG AGCAGG CTCGCAGTACC         TTGCTGCTGTTGCTG  45 21
LOY33_RS10360 2317656 .. 2317680 + -11.4  -3.27525   CACACTGAAAGGGTC         GGCGCGCGCCG GTGC CGG-GCGTGCC          TTCCATTTCACGGGA  71 33
LOY33_RS10365 2318034 .. 2318045 +  -7.2  -2.55253   GTCCTGTTCGCTCAG                GCGC AGCT GCGC                 TGCCTTCAGGTTGCT  47 116
LOY33_RS10375 2319528 .. 2319540 +  -6.9  -4.07568   GGGCTGGAGCCCTGA                GGCTG TAC CGGCC                TTTTCGCCGGCAAGG  68 26
LOY33_RS10390 2326068 .. 2326097 +  -9.3  -2.87051   ACCTCTGAAGCAACC       GCCGGG-CAGATCG GGC TGATCTTTCCCGGC       CTTTCGTAGTCCCAC  62 33
LOY33_RS10395 NONE
        nfuA 2327836 .. 2327860 +  -3.6  -3.28791   TTCGCAGAAAGAAAA         CGCCTACTACT AAGC AGTTGTA-GCG          TTCTGGCGGGCCCCT  47 13
LOY33_RS10430 NONE
LOY33_RS10435 2338884 .. 2338902 + -11.8  -2.50113   CAAGAATTCGCACTT             CGATAACC CAG GGTTATCG             CTTGATCGGATCATC  68 43
LOY33_RS10440 NONE
LOY33_RS10445 NONE
LOY33_RS10450 NONE
LOY33_RS10455 2344478 .. 2344504 + -11.5  -3.02511   GGAGGTGGCAGTGAC         TGCACGCCAGC CCTGA GCGGGCGTGCG         TATTCCAGGGATGAC  69 10
LOY33_RS10460 2345903 .. 2345919 + -13.7  -3.06796   CAGTAGGACAGGTGG              CGAGCGC TTC GCGCTCG              TTCGCTGGCGTGCCA  79 35
LOY33_RS10465 2346651 .. 2346668 + -10.5  -3.70902   GGGTGATGATGGTTT             CCGGCGT GAGC GCGCCGG              TTTCGATGTAGCCCA  70 230
LOY33_RS10500 2353477 .. 2353493 +  -2.1  -5.43514   GGATATGCCGTAAGC              CATGCGG TAA CCACCTG              TTTTTTCGTTATTTT  84 28
LOY33_RS10505 2353765 .. 2353789 + -13.5  -2.64155   GCTGCCGGGCCAGCG          GCGCCAAGGCT GCA GGCCATGGCGC          TCGGTTTAAACAACG  74 117
LOY33_RS10520 NONE
LOY33_RS10525 NONE
LOY33_RS10530 2359490 .. 2359506 +  -3.6  -3.51232   GCTGCCTGCTGGTCG              TCCGGC GCTAA GCCGCA              TTCGTTTGGAAGGCG  51 15
LOY33_RS10535 2361192 .. 2361202 +  -2.4  -3.57263   CCGGCCAGGAGGGCT                 GACC CAT GGAC                 TTTCAGAGTGCCCGT  47 24
LOY33_RS10540 NONE
LOY33_RS10545 2363222 .. 2363247 +  -3.2   -4.0896   AACTTCGCCGGCGCC         GGCCACTTCG AAGACC CGAAATGACC          TTTTCCGAGCACTTT  58 2
LOY33_RS10550 NONE
LOY33_RS10555 2366196 .. 2366221 + -16.9  -2.74322   CGCGTTGACCCTCCA         GGCGGG-GGCAG GGT CTGCCTCCCGCC         GTTTCCCCCATTCCC  87 33
LOY33_RS10560 2367828 .. 2367864 +    -3   -3.7732   GACGTCGCCCATGCT   GAT-GGCCGAGAGAATCG CGC CG-TGTTCGCGGCCGATC   TTCTTGATGTGCGCC  56 149
LOY33_RS10570 2370039 .. 2370095 +  -2.9  -4.14392   GCGTTCATTTCTGAC CTGCCAGGCATGC-CGCCGCGT-CGCTG TTGC CAGCGCACGCGGTGAGCGA-CAACGCAG TTTTGAGGATTCAGC  60 95
LOY33_RS10575 NONE
LOY33_RS10580 NONE
LOY33_RS10585 NONE
LOY33_RS10590 2373806 .. 2373835 + -12.1  -2.73468   GTAGGCGCCGTTCAG       GGGTGCCGGCGCTG CAC CAGGGCCGG-GCCC       TGGTTGCGACTGTTG  70 37
LOY33_RS10605 NONE
LOY33_RS10610 2378012 .. 2378032 +  -8.1  -2.71763   GCGCTTCGCGCTCGA            TTCGCCGGC AAG GCCGGCGCC            TACTGTGCTTGTGCC  54 95
LOY33_RS10625 2381697 .. 2381707 +  -2.4   -3.2375   CCCCGAGACCGCACG                 CGCG GAT CGCC                 TTGCCTTGTGCCGTA  44 64
LOY33_RS10630 NONE
LOY33_RS10635 2383738 .. 2383759 + -10.9  -2.71731   GCCACGCGTCATGTG           GCCTTCAGT GAAG ACTGAGGGC            TGCTTCAACCCTGAC  66 8
LOY33_RS10640 2385264 .. 2385286 +  -6.9  -4.21194   CGGAGGGGAACAGCG          CGGCG-GCCG CATC CAGCTCGCCG           TTTTCCATCCTGGCG  72 523
         mqo 2392886 .. 2392905 +  -4.2  -3.05384   GACCGTCGATGGCTA            CCTGTCAGC GGG GC-GGCGGG            TTCAGTCCAGCGCAA  45 39
LOY33_RS10710 2401439 .. 2401467 +  -8.9  -3.34013   AGCTCCACACCGCGG       GTGGTG-GCGCC CTGCAC GGCGCGCATCAC        TTCATTGCCGAACTC  58 501
LOY33_RS10745 NONE
LOY33_RS10750 2410170 .. 2410185 +  -3.2  -3.83568   ACAGGCGCGGCTGAG              CAGGTC GCTG GACATG               TTCTTGTACATGTCC  56 137
LOY33_RS10760 NONE
LOY33_RS10765 2413562 .. 2413585 + -13.2  -4.20136   AAACACCGCTTCATC          TGCCGCTTCA TCAC TGAGGCGGCA           TTTAATTTTGACCGT  93 136
LOY33_RS10770 2414447 .. 2414463 +  -2.2  -2.83343   CGAAGGCCCTGTATT              CGACCT GGCGG AGGTGG              TGTGATGATCAATCT  39 4
LOY33_RS10775 NONE
LOY33_RS10780 NONE
LOY33_RS10785 NONE
LOY33_RS10790 2418781 .. 2418791 +  -8.2  -3.14132   GCGGGGTCTTGAGCC                 CGCC CAG GGCG                 TTGATCAGCCGCGGG  56 439
LOY33_RS10800 2421054 .. 2421068 + -12.8  -4.08216   TAGCCGACCGGCGAC               GGCGCC TGC GGCGCC               TTTTACCCAACCTGG  91 38
LOY33_RS10805 NONE
LOY33_RS10810 NONE
LOY33_RS10815 2425671 .. 2425693 +  -7.6  -3.14211   CGGACTTTCTGCCTG           CCTGACGGGG CTG TCCGGTCGGG           TTGATCAACAACAAT  57 21
LOY33_RS10820 2426544 .. 2426561 + -10.5  -2.59564   CAACACTATTCATCC             GCGGGGG CGTG CCCCTGC              ATTGTCCGCTGCCAA  62 41
LOY33_RS10825 NONE
LOY33_RS10830 NONE
LOY33_RS10835 2428817 .. 2428830 +  -3.8  -2.80935   GTTGATGGGCACCAC               CTCG CAGCGT CGAG                TCTAGTGGCTAACGT  43 7
LOY33_RS10840 NONE
LOY33_RS10845 2431818 .. 2431858 +  -6.7   -4.0825   CTGCCAGCTCAGGCA  GATGACCCCGTGGCGGC CCTTCAA GCCACCACGCGTTCAGC  TTATTTAGTTGGCAC  66 300
LOY33_RS10885 2438787 .. 2438806 + -10.7  -5.25803   TGCGCGACACGCCAA            GCCCGAG CCGAGT CTCGGGC             TTTTTTGTGGAAATT 100 46
LOY33_RS10890 NONE
LOY33_RS10895 NONE
LOY33_RS10900 2444707 .. 2444734 + -12.7  -3.41051   CGCAGTACAAATAGT        CGCGGCGGGCGG GATCG CCGC-CGTCGCG        TTGTGGTCGAAGTGC  79 27
         pgm 2446669 .. 2446702 +  -2.1  -3.54459   GCCGGCACCAGGTAG     GCCCGGCGACCCGCA TCGA TGCGGTACTCGGCGC      TTTCCCCGGCCTTCA  48 253
LOY33_RS10915 2450437 .. 2450469 +   -12  -3.02144   TGATGGGCAGCCCGT     GGGTGGCCG-GGTCG CGGG CGATCTCGGCCACCA      TGTTCAGCGCGATCG  65 525
LOY33_RS10935 NONE
LOY33_RS10940 2457437 .. 2457454 +  -2.5  -3.98383   CGAAGGGTTCACCAG             GCCCGGC AACA GCCCAGC              GTTTTTTTGTCGATT  56 180
LOY33_RS10945 2458544 .. 2458560 + -12.3  -2.53271   CGAGCACCGCGTTGC              CCTGTGC ATC GCACAGG              ATGTTGTGCGCGTAC  63 314
LOY33_RS10955 2461730 .. 2461740 +  -6.8  -3.45023   AGGCCTGGCCGACCA                 GCAC CAG GTGC                 TTGTCCTGGTCATAC  56 145
LOY33_RS10965 NONE
LOY33_RS10970 NONE
LOY33_RS10975 NONE
LOY33_RS10980 2465080 .. 2465102 +  -4.1  -3.48276   GTGCAAGTGGTGTTG          TCCTGGTGAG TGCG CTC-CCGGGG           TTGTATCGGAACAAG  51 17
LOY33_RS10985 2465988 .. 2465999 +  -2.2  -3.50393   ACATGGTGGGACGGC                GTGC GTGA GTAC                 TTCTCTGGCCTGCAC  47 94
LOY33_RS10990 2468330 .. 2468346 +    -5  -2.74012   TGGTGTGCCAGTGAA              GCGCCG GCTGA CGGGGC              TGCTTGCGCTGCTGG  44 27
LOY33_RS10995 NONE
LOY33_RS11005 2471337 .. 2471348 +  -5.8  -3.14564   GCCAGGGTCATGTTG                GCCT GCCC AGGC                 TTGCTGCGCGGGTAG  49 318
LOY33_RS11025 2474766 .. 2474796 +  -8.9  -3.22298   ACAGCGTTTGCCCAC      GGCGCACGGC-CAG GTGC CTGCGCCGCACGCC       TTCGTGCTCGATCAC  58 415
LOY33_RS11050 2481972 .. 2481995 +  -3.7  -2.89602   ATCGCATCGCCGGCA          ACGCCGGCT CCTACA GGTCGGCGC           GTTTACTGTAGGAGC  44 42
LOY33_RS11060 NONE
        treS NONE
        glgB 2489955 .. 2489975 +  -2.3  -2.52896   GGGCGATCTGCTGTA            GGAGCCGGC GTT GCCGGCGAA            TCGATTCAAAGGTCC  38 75
LOY33_RS11100 2497764 .. 2497779 +  -5.4   -4.4078   CTGGCTGTCTTCGTC              GGG-CTG GCT CAGGCCC              TTTTCCTTCCAGCCG  72 118
LOY33_RS11110 2499013 .. 2499046 + -18.9  -2.90496   ACCGCCTCGATGTTC     TTGCGCCCGATCAGC CTTG GCTGTTCGGGCGCAG      TCATTTCACCCAGCC  89 69
LOY33_RS11120 2500205 .. 2500241 +  -2.2  -2.52464   ACCAACCCGGGTGGT   TGAGGCCACCGTGCTGG CCGG CTAGAGTGGCGG-CTCA    TGCATTCACAGGGGA  38 23
LOY33_RS11125 2500830 .. 2500859 +  -6.3  -3.73224   CGGCGCCGGCGTTCA       TCGCCACGGCC ACGCCCAG GGCCTCGGCGA        TTTCCTCACGGGTGG  59 113
LOY33_RS11145 2504338 .. 2504359 +  -5.2  -5.10064   GCCCGCAACCTGGCA           TGCATAGC CTCATC GCTATGTA            TTTTTGTATATTGCG  86 85
LOY33_RS11150 NONE
LOY33_RS11155 2507257 .. 2507279 + -13.4  -2.80533   GCCTGCAGAACCTGA           CCGCGCCG CCTGTCC CGGCGCGG           GTTGTACTTTTGCAG  76 160
LOY33_RS11160 NONE
        selD NONE
        mnmH NONE
LOY33_RS11220 2523207 .. 2523226 +  -7.1  -4.19953   GGTAGCCGGTGTCAC            CCGCC-GC TGCAC GCAGGCGG            TTTTCCCATTCGGTC  72 276
LOY33_RS11235 NONE
LOY33_RS11240 2525588 .. 2525607 +  -3.5  -3.47349   CGAGGTGCAAACCTA            CCTGCTG GGCTGA TGGCAGG             TTGTCCATTTCGCGA  47 13
LOY33_RS11245 NONE
LOY33_RS11250 NONE
LOY33_RS11265 NONE
LOY33_RS11270 2531917 .. 2531969 + -19.2  -3.03771   GTAGCCCGCCTCACT GCGCGTCGCCGCGCCTGCCC-CCGGT TTC ATCGGCGGGCAGGT-CGGTGGCGCGG TCTTCGCCGATCTCC 100 37
LOY33_RS11280 2533276 .. 2533314 +  -8.6  -2.66964   AGTGCGTCGCCCAGC   CCAGCAGGGCTTCGCCCG GTA CGGGCGGCGCCTTGGCGA   TGCTGTCATGAATGA  52 324
LOY33_RS11290 NONE
LOY33_RS11295 2535295 .. 2535311 +  -4.4  -4.56597   GCGAAGGTGTAGCCG             GCCTCGG CGTA CC-AGGC              TTTTTCCGGGCCGGC  72 518
LOY33_RS11305 NONE
LOY33_RS11310 NONE
        feaR 2540001 .. 2540013 +  -3.3  -2.89683   ACCACTGGCTTGACC                CTGCG GGG CACAG                TGTATAGGCTCGCAT  42 44
LOY33_RS11320 NONE
LOY33_RS11325 2542317 .. 2542339 +  -4.8  -3.52652   CAACGGTGCCCCAGG           CGTCGAGTTC GCC GAGCTGGATG           TTGTGCTTGAGTGCA  52 429
        hpaR 2544519 .. 2544530 +  -7.2  -3.14931   CAGTTCGATGTAGCG                GCGC GCCA GCGC                 TTCATCGGCGCTGAG  52 242
        hpaA 2552825 .. 2552836 +  -2.2  -4.08216   ATGCCTTTTACAGGG                GTGC GCTT GTAC                 TTTTCAGAGCGCTCA  56 120
LOY33_RS11405 NONE
LOY33_RS11410 NONE
LOY33_RS11415 2560565 .. 2560583 +  -2.2  -3.07935   CGGTGATCGAGCCCA             GGCCGCTG TTT CGGCGACG             TTGAGTGCGTAGGGT  41 3
LOY33_RS11420 NONE
LOY33_RS11425 2561983 .. 2562005 +    -4  -4.03167   CGGTGATTCCGTACC           GCTCGGCCAG TGG CTTGCTGACC           TTCTTTACCTTCTCG  61 121
LOY33_RS11445 NONE
LOY33_RS11450 2565652 .. 2565666 + -12.8  -3.25015   TTCGATTTGAATGTC               GGGCCC GGG GGGCCC               TTACTAGTGGTTACA  79 100
LOY33_RS11455 2565973 .. 2566008 + -18.2  -3.09492   ACCGCGCCTGACCCC    CATGCGCCCGGCTAGC CCAG GCCGGCCGGGCGCAGG     TATTCCGGTTGCAGG 100 30
LOY33_RS11465 NONE
LOY33_RS11470 NONE
LOY33_RS11475 2568827 .. 2568843 +  -7.2  -2.79183   TGGCTCCTACACAGG              CTGCGG CGTTA CCGCGG              TCTCCTGCAAATGCA  51 113
LOY33_RS11490 2571655 .. 2571676 +  -8.7  -4.07568   CCCAGGCTGCGCCCC           GCGTTTCCA CGCC TGGATACGC            TTTTGCCAGCCGCGC  72 290
LOY33_RS11535 2579537 .. 2579551 +  -4.3  -3.14132   GCATTGCCCCAGGCA               TCGAT AGCTG ATCGA               TTGGTCAGACACCGG  45 101
LOY33_RS11540 NONE
LOY33_RS11545 NONE
LOY33_RS11550 2581086 .. 2581097 +  -3.6  -3.35046   GCAAGCTGGAGGCCG                TGGC ATGA GCCG                 TATTTCCCGGCGTGC  49 18
        ureC NONE
        ureE NONE
LOY33_RS11565 NONE
LOY33_RS11570 NONE
        ureG NONE
LOY33_RS11580 NONE
LOY33_RS11585 2586819 .. 2586833 +  -4.3  -3.13164   CGCGGTGACATTGCC               CCTTA TCAGC TAAGG               TTGCCTGCTTACGCA  45 108
LOY33_RS11590 2588805 .. 2588829 + -12.1  -3.23274   GCCGATGCAGGTGTG          GGCCACCGCGA CCA TTGCGGTGGCG          TTGCCTTGTCAGGAC  75 62
LOY33_RS11595 2589921 .. 2589976 +    -4  -3.74693   GCCACCGCATCGACT TCGATCTGCATGCCG-T-CCAGTGCC AGGCGC GGCACGGGTATCAGGGTGCAGGTCGG TTTGCTGAGCTGGCC  54 69
LOY33_RS11610 NONE
LOY33_RS11615 2592893 .. 2592907 +    -7  -2.54574   GACTGCTAGCTACCG               GCGGGC CAG GCCCGG               GTGTTGATTCGGCTG  50 32
LOY33_RS11730 2622159 .. 2622183 +  -9.2  -2.78463   CCGATGCCTCAGGAA         CCGGAGGCCGG GCAC CCGGCC-CGGG          TGTCATCGGCCGCCT  61 51
LOY33_RS11755 NONE
LOY33_RS11760 2628283 .. 2628327 +  -4.1  -3.72576   GTTGAACAACAGCGC GGCTGCGCCTACCAGGGGCG CGTACT CGACCACGGT-GGCCCAGTC TTTCATCAGCGCCAG  54 386
LOY33_RS11770 NONE
LOY33_RS11775 NONE
LOY33_RS11780 2632510 .. 2632523 +  -5.9  -3.65046   CACCACCGATGCACA               GGGTC GCCA GGCCC                TTCTTCGCATCACGC  59 187
LOY33_RS11790 2634876 .. 2634902 +  -4.4  -3.97947   GATGTTGCGAATGCT         CGATTCGAATTT CTG AAAGTCGGAGCG         TTTGTGGTCGCTCAG  61 244
LOY33_RS11825 2643665 .. 2643677 +  -4.8  -5.08169   CGGTCTGGCGGTTAT                CGCA CTTTT TGCG                TTTTTTCGGCTCTAT  83 59
LOY33_RS11830 2644497 .. 2644513 +  -3.6  -3.53761   CTGCCGGTGCAGTGA              GGTGTC TGCCT GGCGCC              TTTGGGCGCAGATTC  51 26
LOY33_RS11835 2644830 .. 2644844 +  -4.2  -3.53811   TGAGCTTCGGGTTGC               TGGCTG ACA TGGCCA               TTTGACACCCCTCCA  51 56
LOY33_RS11840 NONE
LOY33_RS11845 2647954 .. 2647968 +  -5.7  -2.58272   GGCAGGGCGCCGGCG               TTCCG GATTG CGGAA               TAAATTCCTCATCTG  46 42
LOY33_RS11850 2648867 .. 2648898 +   -13  -3.05844   GTTGACCCGGCTGGC      CGCCCGGA-ACAGCG CAT CGCGGTCTTCGGGCG      TCTTGAGCTGACCCA  70 44
LOY33_RS11860 2651972 .. 2651982 +  -2.4  -3.74693   CGTACTCGATCACTT                 GCAC CCG GAGC                 TTTGATGACCTCGCC  51 75
LOY33_RS11865 NONE
        fepB NONE
LOY33_RS11875 NONE
LOY33_RS11880 2656384 .. 2656403 +  -3.6  -3.20991   GACGGCCCTGCAAAT            CTCAAG CACACTCC CTTGAG             TTACATTGCCTTAAG  47 128
LOY33_RS11885 2658616 .. 2658632 +  -4.4  -3.86015   GTGCACTACAGCCCC             TCG-CCG GGCG CGGACGA              TTTATAAAAACAATA  59 277
LOY33_RS11895 2660591 .. 2660628 + -13.3   -3.0263   ATGCAGGGCGCATGA   CCG-CCCGGGCGGCACTC AGT GCGTGCCGCGCGGCACGG   TCTTGAGCAGGTCCT  79 67
LOY33_RS11930 2672093 .. 2672121 + -11.8  -4.26076   GGCCACGCCACAGGT       GCGCGTCGATCGT GCTC ATG-TCGACGCGC        TTTTCGTAGGCGTCG  91 511
LOY33_RS11940 2674200 .. 2674220 +  -2.3  -3.59946   CGACGATGCACACGC            CAAGGCGCC TAT GGCGCAGCG            TTATGTGGTTGACAG  47 61
LOY33_RS11945 2675397 .. 2675409 +  -6.2  -3.03243   CTAAGACTCGAGCAG                GGCG ACGAC CGCC                TGTTCCCGCGTCAGT  52 123
LOY33_RS11950 2676442 .. 2676468 +  -2.3  -3.66018   GGGATCATTCCGCCG        ACGACTGATTGC ATGC GCAAT-GGTCGC         TTGTTCGCCTGGTGG  51 80
LOY33_RS11955 2678059 .. 2678076 + -12.7  -5.07486   CATCGCCTGGAACAA             TGCCCGC TCAT GCGGGCA              TTTTTATTGAAAATA 100 60
LOY33_RS11960 NONE
LOY33_RS11965 NONE
LOY33_RS11970 2682383 .. 2682427 + -30.1  -3.86283   GCCAACTGAGCCTGT CGACGATTGCCCCGGCGTGCG CAA CGCACGCCGGGGCAATCGCCA TTTCCTGTCACTTGC 100 32
        betI 2683224 .. 2683250 +   -10  -2.62184   CCGGCTCGGCGGGGG         GCGCCTGCGGGG TGT CCTCGCGGATGC         TGATGTACAGCGCCG  57 59
LOY33_RS11995 2685771 .. 2685785 +  -2.8  -4.17316   GCTATCCCTGAGTTC               CTGC CAGTCGA GCAG               TTGTTTTCGCCCGCT  63 93
LOY33_RS12010 2688645 .. 2688656 +  -2.2  -2.71712   GGTGGCGATACAGTG                GCTA TGCT TGGC                 GTTTCGCAACCCGGC  39 58
LOY33_RS12015 NONE
LOY33_RS12020 2690369 .. 2690417 + -16.7  -3.09968   GCAGCGCGCCGGGGC AATGAGGCTGCCAGCCCGGTG AGGTCGC CACCGGGCTGGCAGCATCGGC TATTCGCCTTGCGTG  89 21
LOY33_RS12040 2699043 .. 2699053 +  -3.2  -2.71364   GCTCCAGGTATTGCT                 CGAT GGC GTCG                 TGCTTCAAGACCTAG  41 0
LOY33_RS12045 2700116 .. 2700132 +  -2.1  -3.60296   TGAACTGATCGAGAT              GGCTGGG CGA CCTGGCG              TTTCCCATGACGCTC  47 408
LOY33_RS12075 2707618 .. 2707632 +  -5.7  -3.70104   CGCTAAGAGTTCGCA               CCATC CGTAA GATGG               TTGTCTTGGATCCTT  57 296
LOY33_RS12105 NONE
LOY33_RS12110 2714444 .. 2714469 + -11.9  -3.53012   GGCCCATGCGCAGAA         CTGGTAGCCAT TACG GTGGCTGCCAG          TTTCAACGGAACGGG  77 19
LOY33_RS12120 2716999 .. 2717028 +  -4.2  -4.18018   CCAGTCTCGTTGACG       GC-CGCAGTGCCG TTGAC CGGAACTGAGAGC       TTTTCAGTACCACGG  65 188
LOY33_RS12130 NONE
LOY33_RS12135 2720126 .. 2720158 +  -6.1  -3.85817   GGTGACCGCCTTGAA      GTGGCGGTGAAAGGC CGA GACGCTCATCGCCGC      TTTGTGCGCCAGGCT  62 466
LOY33_RS12145 NONE
LOY33_RS12150 NONE
LOY33_RS12155 2723318 .. 2723355 +  -9.9  -3.09516   TCGCCCAGCTTCTCA   GCCATGT-TGCGGGCGAT CGG ATCGTCCGCGCGCATGCC   TTCGGTGATCAGGCA  62 279
LOY33_RS12165 2724607 .. 2724620 +  -3.7   -2.8474   AACAACGCTGAGCTA               CCGCC CCAC GCCGG                TCCTTCTGAATGCCA  43 40
LOY33_RS12170 NONE
LOY33_RS12175 NONE
LOY33_RS12180 2727353 .. 2727373 + -10.4  -3.68827   GTGTTACTAGTGAGA            GGCAGCTC ATCTA GGGCTGCC            TTTGGCTGGTAGCTC  75 212
LOY33_RS12200 NONE
LOY33_RS12205 2733489 .. 2733508 +  -3.5  -2.62616   GTGGTGATTGACGGT            CATGCAC GCATAG GTGCCTG             TGATGTCAGAAATAC  40 30
LOY33_RS12210 NONE
LOY33_RS12215 2734744 .. 2734765 +  -9.4  -2.60075   TCGATTGAACGACAG           GTCTGCCC CACAGT GGGCAGGC            GTTAATTCAAGGGCA  60 33
LOY33_RS12220 NONE
LOY33_RS12225 2736729 .. 2736746 +  -5.5  -3.78329   GAAACACTGCTTGGG             CCTAACC AACA GGTTCGG              TTTCCATTCGTGCAA  58 109
LOY33_RS12235 NONE
LOY33_RS12240 NONE
LOY33_RS12245 NONE
LOY33_RS12250 NONE
        dctA 2742613 .. 2742670 + -18.4  -3.18738   AGAGCTGGGTTAGGT TTGCGTCCCGGCTCAGTGCTCGCCAA CCACGC TAGGCGAGCGTTGGGCCGGTTCGCGA CTTTTCATAATCATG 100 28
LOY33_RS12260 2743966 .. 2743994 +  -8.1  -5.48825   GTTGGTCGCAAAGCA        GAGGGGTCATCTT GAA ATGATGGCCCCTA        TTTTTTTGGATGATA 100 72
LOY33_RS12290 NONE
LOY33_RS12295 NONE
LOY33_RS12300 NONE
LOY33_RS12305 NONE
LOY33_RS12310 2755113 .. 2755139 + -13.1  -2.84801   AATCCATTCCCATAA        GACGCGTGGCGT GGTG ACGCCA-GCGTC         TGCTGTTTCACCCTG  73 9
LOY33_RS12315 2756610 .. 2756637 + -12.7  -3.28791   TTTTTTGATCGCGAC        TCCCGCTTGCC GCATGG GGCAGGCGGGG         TTATCCCCGAACAAT  79 33
LOY33_RS12320 2758265 .. 2758278 +  -6.7  -2.89055   ACCGCGGTTTGATCG               TGTGC CGAC GCACA                TGTCTACACCATTTC  51 29
LOY33_RS12325 NONE
LOY33_RS12330 2760666 .. 2760696 +    -6  -2.88544   ATACTGGTAACGCTG       GTGGCTGTGCCAGC ACT GATGGCACCTCTAC       TGTCTGGCGGTGACA  51 93
LOY33_RS12335 NONE
LOY33_RS12340 NONE
LOY33_RS12355 2766327 .. 2766363 +  -6.6  -2.78384   TCTAATGAAACCGGA   CACCCATTTA-GGCGAG AATG CTCGCCATAGAGAGGTG    TCTGATGACCAAGCA  49 44
LOY33_RS12360 2767841 .. 2767854 +  -3.8  -2.60496   TCCCCACGCGGAAAA               CCCA ATGCCC TGGG                ATATTTACCAAGCGG  42 336
LOY33_RS12370 2769214 .. 2769236 +  -3.4  -2.52543   AGGTGCAGTTCATAG           CGCTCC CCATCCAGGAC GGAGCG           TAGGTTAGCCAAAGT  39 479
LOY33_RS12380 2772911 .. 2772925 +  -4.2  -4.65895   TTCGTCCGTTGGACC               CCTCAA CCT TCGAGG               TTTTTGCATGAAGCA  70 57
LOY33_RS12385 2773505 .. 2773536 + -11.9  -3.07962   ACTAGCCTTTTCTTA      TAACTCAACTAAA GGACTA TTTAGTTGAGTTA       TATTGAAATGTGGAA  73 97
LOY33_RS12405 2779008 .. 2779022 +  -3.4  -3.06796   ACGCCGTTGCCGCAA               GGTGCG CGC TGCCCC               TTCGCTGGCATGGCC  43 91
LOY33_RS12410 NONE
LOY33_RS12415 2788539 .. 2788549 +  -2.4   -3.7941   GTACGTAACTCGTCA                 CCGG TGC CAGG                 TTCTTGTAGAACCTC  53 64
LOY33_RS12435 2797734 .. 2797746 +  -6.2  -3.15544   GGTCACTGCGGGCAG                GGCC GTCGG GGCC                TTGCTGGCCATCGCG  51 335
LOY33_RS12460 2801081 .. 2801098 +  -4.7  -3.62046   TTGGTGTTGCTCCAC             TGCCGGT CACT GCCGGCC              TTGTTCAGCAGCTCC  52 290
LOY33_RS12500 2808853 .. 2808875 +  -7.6  -3.25015   ACCAGCAAGCGCTCG           TTGTCGCGGT TGA GCCGCGTCAG           TTCGTCCTGCTTGAC  56 415
LOY33_RS12510 2811119 .. 2811142 +  -3.6  -4.57569   CATTTAGCATCGACA          GGGCCCGGCC TTGA GGCCCGAACC           TTTTTGCACAGGTAA  70 469
LOY33_RS12520 NONE
LOY33_RS12525 2813590 .. 2813603 +  -2.3  -3.18264   TGGTGACGGGGGTGG               CGTGC CCGC GCAGG                TTCATCAGTACCCCC  42 154
LOY33_RS12595 2833217 .. 2833231 + -12.8  -2.62983   GCTGACGACCGCTTC               GCCGGC AAG GCCGGC               TCCTATGGGCCTGAG  71 36
LOY33_RS12600 2834513 .. 2834543 +  -9.7  -3.31792   CCGCTGCGTATTGAT      CGACC-CGACCGCC TCCA GGCCGTTGCGGTCG       TTGTCCAGGTGATAG  66 189
LOY33_RS12620 NONE
LOY33_RS12625 2842056 .. 2842109 + -10.8  -3.31144   GTAAAGGCGCGGTTT GATGTGATGCCGGGCCACCATGGC CTGTCA GCCTTGTTGGCCCGGCCCCAGACC TTCTAGCGATCCACC  68 37
        exaA 2846440 .. 2846466 +  -5.7  -3.57144   GGGATCACCAAACCT         GTGGGAGCGGG CTTGA CCCGCGTCTGC         TTTCAAACTGCCAAG  55 77
LOY33_RS12650 2847173 .. 2847231 +  -6.7  -3.36273   CCTACGCCGCTATAC GCAGCAGGCCGGCTTCGATTGCC-AGGTG CAC CAGTTCGGCA-TGGGAGCTGACCTGCAGC TTGCTCTTGAGCAAG  56 57
LOY33_RS12660 NONE
LOY33_RS12665 2849304 .. 2849316 +  -6.9  -3.55487   AACGATCATGTCCTT                GGCGT TCT GCGCC                TTGTAGTTGATGTCG  58 122
LOY33_RS12675 2851774 .. 2851787 +  -4.5  -2.53015   TCCTGCCGTTCCAGC               TTGCC CAGG GGCAG                TGGGTTGGCCGCTGT  43 122
LOY33_RS12710 2862532 .. 2862570 + -14.6  -2.70923   TCTGCCGGCCGTGTC  GAGGGTC-GGCCCGCTC CTGTGA GAGCGGGCTTGACCCGC   ATTGTGCTGTTCGCC  80 56
LOY33_RS12715 NONE
        yejB NONE
LOY33_RS12725 NONE
LOY33_RS12730 2867966 .. 2867976 +  -6.8  -3.36073   GAATGGGCACAACGC                 GGTC ATA GACC                 TGTTTGCGCGGTGTA  58 79
LOY33_RS12735 2869875 .. 2869886 +  -4.4  -3.06831   TACGCTACAGGCATT                GTCT AAGG AGAC                 TTCCATGAGCCTTGC  47 20
        hbdH NONE
         eco 2871194 .. 2871221 +  -6.1  -2.52464   CAGCGACGTGAAACG        CGCCACGGTGG AGTAAC CCGCCAAGGCG         TGGGTTCGGGGCACG  48 10
LOY33_RS12750 2871585 .. 2871616 +  -2.3  -4.57837   CGATTGAGCCCTCTG     C-CCTGATCGACAGG CGTG CCA-TCGGTCAGGCG      TTTTTGCGCCAATGT  66 34
LOY33_RS12755 2874661 .. 2874718 + -14.1  -3.61398   GATCATGCCGGCAAA CGCCAGCAG--GCGGCCGGCGC-CAGCC AGGCA GGCCGTGCGCAGGCCGTAGCGGCTGGCG TTGTTCAGCGACAGC  78 509
LOY33_RS12765 2875314 .. 2875336 +  -3.2  -3.64703   AGCCGCCGGTATCGA           GGTGCCAGAC ATT GCCCAGCACC           TTTACCTCGCGCAGC  53 98
LOY33_RS12775 NONE
LOY33_RS12780 2876549 .. 2876559 +  -5.4  -3.80174   CAGGCGCATCGCCCG                 TTCC GAT GGAA                 TTGTTGTCGCAATAT  61 52
LOY33_RS12785 2876879 .. 2876904 + -16.9  -3.81488   GTAGCGCTTGACCCA         CTGCCCCGCGGC GTT GCC-CGGGGCAG         TTCTGTTTCAGGGCC 100 50
LOY33_RS12790 2877332 .. 2877352 + -15.4  -2.95204   GCTGATTGCAAAAAA            GGCCCGGC ATTGC GCCGGGCC            CTTGTTTGCGGCTAC  84 48
LOY33_RS12815 2881389 .. 2881403 +  -4.2  -3.96148   TCTTAAAGTCGCCGC               GAGCCT GTG AGGCTG               TTTATACTCCGGGCC  60 16
LOY33_RS12820 2882111 .. 2882145 +  -2.7   -4.2349   AGTTGTTGGGGGGTT    GCC-GAGGCGCCGGCT CCGC AGGGGGCGTGTCGGGC     TTTTGCATCTGCAGG  59 90
LOY33_RS12840 2883519 .. 2883541 +  -4.8  -5.05113   AGTAGAAACCTTTAA           GCCCGC TCCCCCCCATC GCGGGC           TTTTCTTTGTCTGGG  83 113
LOY33_RS12850 2885915 .. 2885925 +  -5.4  -3.60098   ACTTTTGTTGCTGCA                 GCTT CAC AAGC                 TTTGGCGTGCGGCGT  55 378
        chrA 2887417 .. 2887455 +  -8.1  -3.86202   CTAAGCGGCAGAAGC  TCGGCGATCTCGCTTGGC CGCT GCAAAGCGAGC-CGACGA   TTTACTCTGCTGCAC  68 129
LOY33_RS12870 2888599 .. 2888612 +  -4.5  -2.96748   GGGCCCCAATTAAGG               GGC-CC CCG GGTGCC               TAGTCTTTCTTCTCG  46 344
LOY33_RS12940 2901343 .. 2901358 +    -6  -4.72986   AAGGGCGCAACCCAA              GCCCGG CCAG CCCGGC               TTTTTCATAAGCGTC  82 69
LOY33_RS12945 2902112 .. 2902122 +  -5.4  -4.08767   CTTGCCTCAGCACAT                 GAAG CGA CTTC                 TTTTACACCGGTGCA  64 235
LOY33_RS12955 2903574 .. 2903586 + -10.5  -3.76125   CATATTTACTCTCCT                GCGGC CTG GCCGC                TTTCACTTCGCGTCC  75 141
LOY33_RS13035 2915313 .. 2915327 +  -4.2  -3.15699   ACTGATGCGAGAGAG               GGCG GGGAGGA CGCC               TGTTGCTACATCCCT  45 36
LOY33_RS13135 NONE
LOY33_RS13140 NONE
LOY33_RS13145 2928850 .. 2928865 + -11.8  -5.29782   CTAATAAGTAAACAA              GCCCGC CCCG GCGGGC               TTTTTTCTGCCTGTC 100 30
LOY33_RS13155 2930311 .. 2930323 +  -7.7  -3.05816   GACCAACCAGCGCCA                CGTCA GCC TGACG                TTAACTGCCCGATGC  57 39
LOY33_RS13160 2931131 .. 2931169 +  -6.6  -3.61178   CAGGGGCATGGCTGG   GGCGTTCGCATTGGCTTC TAC GACGCCGATATCAGCGCC   TTTCGAGTGCATGGA  58 151
LOY33_RS13165 NONE
LOY33_RS13170 NONE
LOY33_RS13175 2932139 .. 2932165 + -10.9  -3.06501   GAAAGGTCCAAGTAT        TGCGTGAGCTCG ATAA CG-GCTCACGCG         TTCGATGGAACTGTC  69 80
LOY33_RS13180 NONE
LOY33_RS13185 NONE
LOY33_RS13190 NONE
LOY33_RS13195 2934854 .. 2934864 +  -8.2  -3.53811   TTGCACGTTCACTTG                 CCGC CCA GCGG                 TTTAAAGGGGGTGCC  62 79
LOY33_RS13200 NONE
LOY33_RS13205 2935922 .. 2935935 +  -3.7   -5.4833   ATCCATTCGACCAGA               GGCGC ATCA GAGCC                TTTTTTGTTGCCTAC  87 47
LOY33_RS13210 NONE
LOY33_RS13215 2937032 .. 2937047 +  -2.5  -3.72695   GTGCGAATTGAATCT              GGTCG TGCCGC TGACC               TTTGGTCACCGCCAT  51 61
LOY33_RS13220 NONE
LOY33_RS13225 2939416 .. 2939428 +  -6.2  -3.74345   GATCACACACCTTGA                GGCC GACTG GGCC                TTTGCATGTGTCGAT  59 165
LOY33_RS13235 2939988 .. 2940003 +    -4  -2.72977   AGCGGGCACAAAATA              CTGTTT ATTT GAACAG               TACTATCTATGCACT  43 88
LOY33_RS13240 2940533 .. 2940543 +  -6.8  -2.69468   TGGACTTACCATCAT                 CGAG TGT CTCG                 TCATGTGTCCGCGTG  48 253
LOY33_RS13250 2941244 .. 2941260 +  -6.6  -3.23047   AAATACGGCATAACG              GTGATG GATCA CATCAC              TCTTGGCTTTCTACC  54 158
LOY33_RS13255 NONE
LOY33_RS13260 2944690 .. 2944716 +   -10   -3.8186   GTTTTCGCGACCCGG         GTAGGGGCCAGC CTT GCTGGCCACAGC         TTGTTCGTTAGCCTG  77 90
LOY33_RS13265 2946213 .. 2946230 +  -6.3   -3.8211   GTGATCGGCAGTTTG             TGCGCCAG TGC CTGG-GCA             TTCTTGTCGATGGCC  62 248
LOY33_RS13280 NONE
LOY33_RS13285 2949299 .. 2949318 +  -3.6  -3.28712   CCCAGAACACCAGCT            GATACGACA ACT TG-CGTGTC            TTGTGCCGGAACACC  47 175
LOY33_RS13300 2952382 .. 2952394 + -10.5  -3.29511   CGCAGCCTGCACCTC                GCCGG CGG CCGGC                TTCTGCAAGGCTCGA  68 42
        pnuC NONE
LOY33_RS13310 2953786 .. 2953798 +  -3.3  -4.07568   CCAGCGGTTGTATCA                CCGGT GAT ACAGG                TTTTCCGACCAGCCC  58 180
LOY33_RS13315 NONE
LOY33_RS13320 NONE
LOY33_RS13325 2956028 .. 2956045 + -14.1  -3.75665   AAGCTGAAAAAGGAC             GGGGCCC CCAG GGGCCCC              TTTCCTGCCATCTAC  95 39
LOY33_RS13330 NONE
LOY33_RS13335 NONE
LOY33_RS13340 2958890 .. 2958921 + -24.6  -3.14931   GCCATTCGCCAGCAA      GGCTGGCTCCTACC TTCG GGTAGGAGCCAGCC       TTGCTGGCGAATGGA 100 52
LOY33_RS13350 2960896 .. 2960914 + -14.6  -6.02919   CCCGTTCATGCAAAA             GTGCACCC ACC GGGTGCAC             TTTTTTTGTTTGTGA 100 54
LOY33_RS13375 NONE
LOY33_RS13380 NONE
LOY33_RS13385 NONE
        cobM NONE
LOY33_RS13395 NONE
LOY33_RS13400 2974961 .. 2974995 + -10.7  -2.80816   CGCACAGGCATCGTT    CTGCA-CCGAGGTGGC GTGG GCCGCTTCGGCTGCCG     TCTGCTGGGTACACA  61 523
LOY33_RS13415 2977640 .. 2977658 +  -8.8  -4.11216   CGGCGCTGGCGCGAA             CTGCCTGA TTT TCCGGCAG             TTTTCCGGCTCACCA  78 18
LOY33_RS13420 2979225 .. 2979235 +  -8.2  -3.14132   TCTCGGCCTGGCTGG                 CCCG CCG CGGG                 TTGGTCAGGCCGCAG  56 150
LOY33_RS13445 2984150 .. 2984179 +  -5.5  -2.63596   TTCACCATCAACATC       GCCGCCGGC-CTGC TCA GCTGAGCCCGCCGC       TGGTCTGAAATACCC  46 5
LOY33_RS13450 2984906 .. 2984960 + -12.1  -3.08015   GCCACGATGGCCGAC ACGATCGCGGCATCGT-CGCTGTCCTG CTC CAGGTC-GCGCACGAAGCCACGGTCGA TCTTCAGCTCGTTGG  69 225
LOY33_RS13500 NONE
LOY33_RS13505 3002875 .. 3002889 +  -7.1  -3.35046   CGCGCGCCTGGGCCA               CCGTG TTCTC CACGG               TATTTCGCGGCCTGC  58 314
LOY33_RS13515 NONE
LOY33_RS13520 NONE
LOY33_RS13525 3006424 .. 3006455 +  -3.4  -2.87211   CCGCCAGCCCCCATG      CCGGCCCCGGGCTC ACCG GTGATCGCGGCCAG       TATCTGGCCCACGAT  41 249
LOY33_RS13540 NONE
LOY33_RS13545 NONE
LOY33_RS13550 NONE
LOY33_RS13555 3012273 .. 3012286 +  -5.2  -2.75064   GCGCAAGGGCCAGCC               GGCC AGCTGA GGCC                TGGTTGCCTACGCCG  47 16
LOY33_RS13560 3013563 .. 3013575 +  -9.1  -3.17075   GACCACCTCATAGGG                CTCGC TGC GCGAG                TTCAATTCCAGCGGC  59 184
        gguC 3015514 .. 3015545 + -15.1  -2.83403   GTGAAAGCGCTCTGA      ACCGCAGGCGGCGC CCCGC GCGCCGCC-GCGGC      ATTTCATAACAACCA  83 26
LOY33_RS13575 NONE
LOY33_RS13580 NONE
LOY33_RS13585 3020194 .. 3020222 +  -8.7  -3.09834   GCAGCCAGGCTGTCA        ACCAGCATTGCGC TCT GCGCATCGCTGGC        TTCGATCATCAGCTG  56 121
LOY33_RS13600 3023815 .. 3023841 + -10.9  -3.34895   CCGCAGCCGCCACCG        CGCT-G-GCCGCG CCG CGCGGCACCAGCG        TTGCTTCGAGCTGGG  66 295
        thpR NONE
LOY33_RS13615 3026001 .. 3026015 +  -7.8  -3.21276   TACTACACCGAATGA               GGGGTG GCC CACCTC               TATTGTAGGAGCCGG  59 26
LOY33_RS13640 3031751 .. 3031769 +  -8.1  -3.50422   TCCCCACGCCGCTGC             GCGCTGC CACCA GCAGTGC             TTCATTGTCATTGCT  60 262
LOY33_RS13685 3041016 .. 3041040 + -14.2  -5.61596   GCACAACACAAAAAA          GGGGGACGCC ATCAC GGCGCCCCCC          TTTTTTTGTCAGCCT 100 124
LOY33_RS13715 NONE
LOY33_RS13730 3051453 .. 3051510 +  -9.2   -3.6053   TGGCGATGGGTTCCA GGCTGCGATCGATCTGGCCATACAGCTGC TGG GCAG-TGC-TGGCCAGGGCGG-CGGAGCC TTCATTTCTGGCCAG  64 261
LOY33_RS13740 3052978 .. 3053000 +  -2.7  -2.79831   GTACGCAATCGAGGA          CC-ATTGGCC ACAG GGTCGATAGG           GTCTTTTGCACTGCC  39 4
LOY33_RS13745 NONE
LOY33_RS13750 3055101 .. 3055111 +  -8.2  -3.01712   GGGCACCGAACAACA                 GGCC CTT GGCC                 TCTTCCAGCAGCGCG  55 258
LOY33_RS13765 3056609 .. 3056630 + -10.8  -3.64703   GCGTAATGCCGCAAA           CGGTGCGG CCCCAC CCGCGCCG            TTTGCCTGCGGCGCC  75 35
LOY33_RS13770 NONE
LOY33_RS13775 3057855 .. 3057879 +  -6.4  -3.58343   GGCGGCGTCTAACGG          GCATATCCGC AATCA GTGGCTATGC          TTTGCGCGTGATCCA  58 29
LOY33_RS13780 3058621 .. 3058647 + -10.2  -3.14878   ACGCACCGCCCACCA        CCCGATGGCAG CCGCGC CTGCCA-CGGG         TATTCCATTGGAACA  66 113
LOY33_RS13785 NONE
LOY33_RS13790 NONE
LOY33_RS13795 3061128 .. 3061145 +  -8.3  -3.14132   CAGCACCAGGCTGGC             CGCCGCC GGCT GGCCGCG              TTGCTCGGCAAAGGC  56 486
LOY33_RS13805 NONE
        soxR 3069877 .. 3069887 +  -4.6  -3.27923   GCCACCTCAAGGGTG                 CCGC CCG GTGG                 TTGATGGTCTTCGAG  49 519
LOY33_RS13845 3072628 .. 3072646 +  -4.4  -3.47941   GCACATCAGATGAAG             CGTCGGGG TGA CCATGGCG             TTGTCCTGATTGATG  51 514
LOY33_RS13870 NONE
LOY33_RS13875 3076985 .. 3076996 +  -2.2  -2.87931   GCAATAGCGCTGCAA                CTCG TTGA TGAG                 TGTATCCAGCCTCCA  40 324
LOY33_RS13890 3080937 .. 3080953 + -11.5  -3.05935   GCAGGACGATTTCAA              GCGGCTG TAA CGGCCGC              TTGGATGGACCCTAT  69 57
        cynR 3084930 .. 3084940 +  -3.2  -3.36803   TGCCCTGCCAGTGCT                 GCTA AAG TGGC                 TTATCCATAGGGTTC  47 121
LOY33_RS13920 3086145 .. 3086156 +  -2.2  -2.62263   GCTGGCATTCCTACG                CTGG CATT CTAG                 TAATCTCACAACGCT  38 195
LOY33_RS13925 3086751 .. 3086776 +  -8.9  -3.16564   TTTATGACGGCTGTA         CGCAGGGCGCA TTCG TGCGCGCTGAG          TTCCTGGAGTCCCGG  60 222
LOY33_RS13930 3089720 .. 3089741 + -13.1  -4.68593   GAAGCCGTATGAAAA           TAATCCCCG GTTT CGGGGATTA            TTTTTGCCTGATGGA 100 51
LOY33_RS13960 3098605 .. 3098631 + -12.2  -3.01712   GCCAGCATTCGATGT         AGCCACTCGCAC CGA GGGCGAGTGGCG         TATTACGGCAAACCC  71 260
LOY33_RS13965 3099906 .. 3099923 +  -5.6  -3.70149   TCTATGCGCCGTAGA             TCAGCA ATGAAG TGCTGA              TTTGGGTGCTATCGA  58 27
LOY33_RS13975 3101847 .. 3101869 + -16.3  -3.31461   GTGACGGTTGCGATT           GGCCAGGGC TTCAT GCCCTGGCC           TTCTCACGCTGAATC  89 37
LOY33_RS14045 NONE
LOY33_RS14050 NONE
LOY33_RS14055 NONE
LOY33_RS14060 3120433 .. 3120444 +  -3.6  -3.64703   CAGCGCCAGTAAAAC                CTGC ACAT GCGG                 TTTGCCTGACACACC  54 243
LOY33_RS14065 3121747 .. 3121766 +  -7.1  -3.33492   GAGCCACACCTGTCA            CGCAGCG CCCGCC TGCTGCG             TTATCCACTCGATGA  58 39
LOY33_RS14075 NONE
LOY33_RS14080 3124817 .. 3124828 +  -2.2   -3.7732   GAGAAAGGCGGCAAA                G-GCC GGC GGCAC                TTGTTGCTGTACGGC  54 377
LOY33_RS14100 3128473 .. 3128509 +    -5  -3.41051   CCGACACCGATCACG   GCGCTGGCTCGACGGCCC AGC GGG-CG-CATGCCATCGC   TTGTGCTCACGGTAA  51 393
LOY33_RS14110 3129994 .. 3130005 +  -2.2  -3.91897   CAGGGCGCCGATCAG                C-GCC GTG GGCAG                TTTCTGGATGGCGCC  56 201
LOY33_RS14120 NONE
LOY33_RS14125 3131956 .. 3132002 +  -9.3  -2.52464   GGCGCCTTAGGCACC TGCCGCAGCCAGGTTGCCGGGG TCGC CCTCGGCCAACAG-CTGCGCCA TGCGTTCACGCGCCG  59 56
LOY33_RS14140 3133667 .. 3133678 +  -7.2  -3.32844   CGCGTGGTGCAGGAC                CGGC CCTT GCCG                 TTGTAACCTCGCCGC  58 8
LOY33_RS14145 3134815 .. 3134834 +  -3.5  -3.14881   CGCCCAGCGCTTCGA            GCATCTG GTGCAG CGGGTGC             TTCATCAGCCCGTTG  45 433
        mrdA 3140350 .. 3140386 +  -7.4  -2.55551   CACCCTGATCGTGCC   GACAGCA-TCTGATTGC ATTT GCAATCAGATTGCAGTA    TCCCTTGCGCTTCTG  50 49
LOY33_RS14175 3141535 .. 3141547 +  -6.2   -3.1372   CTGTTCCAGCGCCTG                GGCG AACAG CGCC                TGTTGCTCGGGCGTG  51 62
        aceE 3145047 .. 3145061 +  -2.7  -3.47227   GAAGCATCATCGCGC               GCCGG AATCA CCAGC               TTGTCGTCCTTGAAG  48 335
LOY33_RS14195 NONE
LOY33_RS14200 NONE
LOY33_RS14205 3148258 .. 3148283 + -11.9  -2.50077   CGGCAGAATAGAAAA         GAAGGCG-CGGG AGT CTCGGCGCCTTC         CTGGTTTTGTGCGGG  68 30
LOY33_RS14215 3151105 .. 3151123 +  -7.4  -2.75481   GTCCACCGTGCCCAC             CGCCTG CGAGCGC CAGGCG             TAGTTGCCGTTCACG  51 270
LOY33_RS14235 3156565 .. 3156586 +  -5.1  -2.55551   GGAGCGGCCGGGCAT           C-GCGCTGGA GCA TCTGGCGCAG           TAGATTCGGATTGTC  43 1
LOY33_RS14240 3157185 .. 3157203 +  -5.8  -3.73224   GGGAGCGGGCTTGGC             CCGCGATC CCA GTGCGCGG             TTTCGTGAACGATGA  58 117
LOY33_RS14250 3158119 .. 3158146 +   -12  -2.50195   GCCTGCTCGGCGCCT        AGCGCTGCGCCAT GGC ATGGCGC-GCGCA        CTGTTCGTAGTAGGT  68 24
LOY33_RS14280 NONE
LOY33_RS14285 NONE
LOY33_RS14290 3164161 .. 3164174 +  -2.3  -3.64716   CTTGCGCACGTTGTC               CTGCC CGGC GGCAA                TGTTTTCCCCGATCA  51 267
        argC 3167964 .. 3167975 +  -3.6  -4.83615   CAGCGCCAGCAAAAC                CTGC CCAC GCGG                 TTTTTCTGCCCACTC  75 246
LOY33_RS14315 NONE
LOY33_RS14320 3172221 .. 3172239 +  -5.8  -3.14132   CACGCGGACTGCCCG             CCGCCCTC CAA GTGGTCGG             TTGATGCCCGCGCCC  49 43
LOY33_RS14325 3172816 .. 3172839 + -10.2  -2.80344   GGACAGCCGGGCCCT          GGCAGGTCAG CATG CCGGCCTGCC           CTTCTTCACTGCACA  63 66
LOY33_RS14330 NONE
LOY33_RS14335 3175941 .. 3175958 +  -3.4  -3.51934   CGCTGGCGCTCGCCG             CCCGACA GATGA TG-CGGG             TATTTGTGCGCCGCA  49 235
LOY33_RS14375 3185440 .. 3185465 + -16.1  -2.82936   CCAGCCGCTGAACAC         CGGGCGCGGGG CCTG CCCTGCGCCTG          CTTTCCCCTTTGCCT  86 30
LOY33_RS14380 NONE
LOY33_RS14385 3189107 .. 3189122 +  -8.2  -2.57944   TCGCGGGTCAAGCCC              GCTCCC ACAG GGGGGC               ATTGCTCTGGTGCTG  53 47
LOY33_RS14390 NONE
LOY33_RS14395 3191455 .. 3191468 +  -4.5  -2.52516   ATCGGGTCGACGTCG               CGGGT GGCC ACCTG                ATTGCTGCTGCAGCA  43 11
LOY33_RS14400 3193854 .. 3193893 +  -2.6  -2.52543   TCACCAGCCGATTCT  GATCGACCGCGCTGGCGG CAGG CTGCCGGCGCACTTCAAC   TGCCTTGCAAGGAGT  38 24
LOY33_RS14405 3196454 .. 3196501 + -18.6  -3.21416   CATCCACTGCGACAG CGCTTCTATAGTGTGGCGGGAAC CAC GTTCCCCCCACTCTA-AGGAGCG TTCATGCTGCGCGTA 100 104
LOY33_RS14410 3198132 .. 3198144 +  -4.8  -3.76224   GGTGAAGGGGGAAAA                CGGA TTGAC TCCG                TTTCCTGGCTGACCC  56 78
LOY33_RS14415 NONE
LOY33_RS14420 NONE
LOY33_RS14425 NONE
        clsB NONE
LOY33_RS14435 3204207 .. 3204227 +  -3.1  -3.36273   TGAACGGCCATCCAC            GGCCTCGAT CAC GTCGTAGCC            TTCCTGTTGCAGCAC  48 289
LOY33_RS14450 3207415 .. 3207433 +  -7.3  -2.88663   CCGCTCAAGATGCCC             GCGCGCC CCTGC GGCCCGC             TCTGTCAACATAGGT  53 127
LOY33_RS14455 3208283 .. 3208307 + -15.8  -4.65895   GCAGGCACAAAAAAA          GGCCATCGAG GCATG CTCGATGGCC          TTTTTGCATACGCGC 100 48
        rarD 3212758 .. 3212774 +  -7.9  -2.98545   GCTCGTGACCGGCCA              GCAGCTC CCT GAGCAGC              TCCTTCTTGTGCACG  53 476
LOY33_RS14480 3214798 .. 3214812 +  -7.1  -3.06831   TAATGCCCGGGCGTC               GCAGC CAGGT GCTGC               TTGAATGCCCGTTGC  51 119
LOY33_RS14490 3216292 .. 3216314 +  -6.3  -2.89742   TGCGCCTGCACCGCC          CCG-ACCGAGC GTA GC-CGGTGCGG          TGTCTGGGCATTAAA  48 77
LOY33_RS14500 NONE
LOY33_RS14505 3218807 .. 3218822 +  -3.2  -3.68222   CACGTTGTTGTAGTA              CCTGGT ATCC AGCAGG               TTCTTCACGTTCAAG  53 193
LOY33_RS14530 3225109 .. 3225135 +  -5.9  -3.02461   TCGCGGCTGCGCACA        TC-CAGCCCG-TG CAA CAGCGGGCTGAGG        TCTTCCAGGCGCTTC  49 51
LOY33_RS14555 3231873 .. 3231894 +  -4.3  -2.87463   CATCGGCAGGAGCGC           CG-GCTGGCG TAG CGCTTGCACG           TGTGTCCGGGGCGTT  44 333
        glgA NONE
        treZ NONE
        malQ NONE
LOY33_RS14575 NONE
LOY33_RS14580 3240524 .. 3240577 +   -11  -2.71712   ACGCCGCCGTACCTT GCG-T-CACTACCGCCCCGGGGCAGCG CAA CGCTGCCCCGGCGCCC-AGTGCGTCGC CTTTCGCCCCCCAAG  66 40
        glgX 3242965 .. 3243006 +  -9.2  -3.89412   GTGTTCAACTTCATT CCGGGCCTCTGGCACGCG GCTTTG CGCGCGCCATGGGGCAGG  TTTGCTGGTTTGGGT  75 213
LOY33_RS14590 3244205 .. 3244225 +  -9.7   -2.7682   GCGACACGCATACCC            CCGTCAACC TGA GGTTGACAG            CTTATGTATACTGGC  61 76
LOY33_RS14595 3245349 .. 3245363 +  -3.5  -3.16935   ACAGCGCGGGGCTTC              GCAGGC ATGA GCC-GC               TTCGTGGGGGTGTTT  43 16
LOY33_RS14600 3245622 .. 3245639 +  -2.5  -3.98204   CCCTGATCTGACTGC             GGGGCGC ACAT GAGCCGC              TTTGTCGCTGTGTTT  56 47
LOY33_RS14605 3246151 .. 3246164 +  -8.1  -3.21099   TCTTGTGCGGTGCGC               CCAGG CGAG CCTGG                TTCATCGTCGACGAG  54 294
LOY33_RS14615 3246714 .. 3246726 +  -7.7  -3.15579   CCCTCTATAGGTTCA                TCGAC AAG GTCGA                TTAGTCACAAATTAA  57 58
        fdnG NONE
        fdxH NONE
LOY33_RS14630 NONE
        fdhE 3252504 .. 3252562 + -13.1  -2.71791   CGCGGTCGTGGGTGT GCAGGTAGAGGTGCGTGTGCCCCAGGGC CCTG GCCTTGGTGCAGATGC-CCTCGATCAGC GTTTCGGCCAGGCCT  67 126
LOY33_RS14645 3254921 .. 3254948 +  -7.6  -2.91144   CCGAAGATGCCCGCC        CCGCCATACAGC AACA GCAGGATGGTGG         TCATTTCGCCGCTCA  52 458
LOY33_RS14655 NONE
LOY33_RS14660 3257659 .. 3257706 +  -7.7  -3.65603   AGCGTCAGACCTTTC CGATCAACTGCTCTATGCCGG TAACCT CCGGTGTAGAGCGGTTCACCC TTGTTACACATATTT  66 84
LOY33_RS14665 NONE
LOY33_RS14670 NONE
        gcvA 3262157 .. 3262167 +  -4.6  -3.57615   TGCTCGACTTTATTT                 CGCT TGT GGCG                 TTTGCCGGATGTTGG  53 50
LOY33_RS14685 3263449 .. 3263465 +  -2.1  -2.78596   GCTGGATATCCTGGA              GCGCTGC CTG GCAGAAC              TGTCATGAGCAAGTG  39 1
LOY33_RS14690 NONE
LOY33_RS14695 NONE
LOY33_RS14700 NONE
LOY33_RS14705 NONE
LOY33_RS14710 NONE
LOY33_RS14715 3270348 .. 3270383 + -10.2  -3.14132   CTCGAGGTGAGCGAC    GCCACCCGCGCCCAGC CGCC GCTGCGCGCTGGCGCC     TTGCTCAAAGCGCCG  66 31
LOY33_RS14730 3273643 .. 3273677 + -15.9  -2.93073   TCGGTATTTGAAATC    G-ACCTAGGGCTCTTC AGAA GAAGAGCCCTGGGTAC     TAGTTGTTCCAGGCC  87 19
LOY33_RS14745 3279045 .. 3279062 +  -9.1  -2.78384   GTTTCTGATGTGAAG             TGGCGCA GGGA TGCGCCG              TGTCGTGACCCGCAC  58 33
LOY33_RS14755 3280656 .. 3280669 +  -9.5  -2.51133   CACTGCTGCGGCATT               GGCCG AATG CGGCC                CTTCGTGAATGGCTG  59 70
LOY33_RS14760 3281397 .. 3281412 +  -7.5  -3.32844   TTGGCTGACCGCTAT              CGGCC AATAGC GGCCG               TTCTGGAATGGCAGG  58 47
LOY33_RS14765 3283114 .. 3283127 +  -2.3  -4.08767   GGAACAGCAGCAGGC               CCAGG CTAT CCTGA                TTTTCACAAAATACA  56 368
LOY33_RS14805 3289170 .. 3289197 + -12.7  -3.74693   ACCCCTTTAACCTTG        CCCGGTCGCTG TAAACC CAGCGACCAGG         TTTGGTCACCTGAAA  84 329
LOY33_RS14810 3289632 .. 3289654 +  -4.1  -3.50869   TATCGAAAGCCAAGA          GGTGCGAGCG ACTG CGTTCG-GCC           TTGTCTCAAATAGTG  51 71
LOY33_RS14820 3292134 .. 3292144 +  -8.2  -2.87211   AAGAATCGGTCAGCG                 GCCC TGG GGGC                 TATCTGCGAGCCAGT  56 127
        paaY NONE
        paaX NONE
        feaR 3314511 .. 3314530 +  -5.6  -3.63515   AGGCCATAGTCGCTG            TCGTTGGC GCGG GCCAGCGC             TTCTTCCACATCGGC  57 272
        ccoN NONE
LOY33_RS14970 3324705 .. 3324720 +  -3.2  -4.84359   AAGTCCAGCAATGCC              CTTTGC TCAA GCAGGG               TTTTTGTACAGCTCG  73 263
LOY33_RS14980 NONE
LOY33_RS14985 3328246 .. 3328278 + -25.1  -4.57073   TAGGCCGATAGGCCT      CAAAACGCCCGATGC ACC GCATCGGGCGTTTTG      TTTTTCAGGGCCATA 100 84
LOY33_RS15005 3336458 .. 3336492 + -11.4  -3.01712   TGCAGTTGCTGAGGG     TGCCGGCGCTCATC ACCTACC GATGAGCACCGGCC     TGTTGCGGCCCCAGG  68 0
LOY33_RS15010 3336881 .. 3336899 + -10.3  -5.75342   TGATGCCGACCAGAA             CCGAAGC CTTGT GCTTCGG             TTTTTTTTCGCCCGG 100 50
LOY33_RS15015 NONE
LOY33_RS15020 3339009 .. 3339026 +  -3.3  -3.69354   ATCTCCTTTACCATA             GC-GCCCC TCA GGCGCAGC             TTTACCGTTCTGCGC  52 136
LOY33_RS15025 3339967 .. 3339977 +  -8.2  -3.04144   CCTGCATCACGATCT                 CGCC GCC GGCG                 TATTCGGCATGAAAG  55 148
LOY33_RS15055 NONE
LOY33_RS15065 3348017 .. 3348041 + -12.1  -3.48684   ATCCCACGCCACATC          GAACGGCAGCG GCA CGCTGTCGGTC          TTGTACTGCTTGTCG  73 131
LOY33_RS15075 3351052 .. 3351064 +  -3.3  -4.18018   CGCTGCGACCGTCGG                CGCCA CAA TGGCC                TTTTCGCTGGCCGGC  63 219
LOY33_RS15095 NONE
LOY33_RS15100 3357185 .. 3357207 +  -3.2  -2.62184   CGCAAGATCGTACAA           GGCAAGCGCC CAC GGCTCTGGCA           TCCTGTGCAACCGAC  40 54
LOY33_RS15105 NONE
LOY33_RS15110 NONE
LOY33_RS15115 3359453 .. 3359486 +  -5.2  -3.02144   CGGCTCAACTGCAAC    CAGC-GCGGGTCGAGC TGAC GCAC-ACCCGCCGCCG     TGTTGAGCAAGATCG  47 393
LOY33_RS15145 3364691 .. 3364714 +  -5.3  -5.14563   CCTCCGATAGCAGCC          TACCCACCGC ACAGA GTGG-GGGTA          TTTTTTACTGCCAGG  86 102
LOY33_RS15150 3366766 .. 3366781 +  -7.5  -3.25823   GTCGCGCAGGTCGTC              CCGGC ACACCG GCCGG               TTGCTCTCGCGCGAA  56 424
LOY33_RS15210 3378114 .. 3378142 +  -6.5  -3.40403   CATCCAGCGCCCCGG        CCCCCAGCACCTG CAC CGGGCTCTGCGGG        TTGTACTGCGGCCCC  55 142
        gspI 3400773 .. 3400800 +    -9  -2.68823   ATGCGGCTGCGTTCC        CCGGCGCGCTCG ATCA CCAGCGCATCGG         CTTCTATGGCCACCA  55 82
        gspH 3401682 .. 3401721 +  -7.7  -2.79302   GCCGGCCGTGTCGAG  GTGCACCAGCCATGAGG CGCCAC CCACAGGGCGGGTTCAC   TCTGATCGAGGTGAT  54 11
LOY33_RS15275 3402766 .. 3402784 +  -6.7  -3.34344   GCCAGCACCTCGACC             TCGCCTT CGAGC AGGGCGA             TTGCTTCGCCGCTGC  54 487
LOY33_RS15295 3404957 .. 3404974 + -14.1  -2.64155   GGCGTTGCCGGCGAA             GCGCCGC GCGG GCGGCGC              TCGGTTTGGGGAGCA  78 95
LOY33_RS15310 NONE
LOY33_RS15315 NONE
        mobA 3412410 .. 3412444 +    -4  -3.54424   GAGGGCCTCTTCGCG     GGCCAAGCCCGCTCCT ACA GGGGGCGGCGGTGACC     TTTAGGCCCGTGCAA  51 60
LOY33_RS15420 3432630 .. 3432646 +  -9.3  -3.01712   ATCGGCGAATGCAGG              CGCGCCG CTG CGGCGCC              TGTTGACAAGCCGCC  62 179
LOY33_RS15425 NONE
LOY33_RS15430 NONE
LOY33_RS15435 NONE
LOY33_RS15440 NONE
LOY33_RS15445 3439019 .. 3439038 + -16.4  -4.27316   GTGTAGATGAACAAA            CGCCCCGG CTTG CCGGGGCG             TTTTGCGTTGGCAGC 100 55
LOY33_RS15460 NONE
LOY33_RS15465 3443764 .. 3443776 +  -2.6  -2.87051   AGTTCGGACATGTCA                TGGC CCTAT GCCG                ATTTCGTCATCCACA  40 76
LOY33_RS15470 NONE
LOY33_RS15475 NONE
LOY33_RS15480 NONE
LOY33_RS15485 3447396 .. 3447407 +  -2.2  -3.53012   CCGCCCGCATGAAAC                GCACC CCG GG-GC                TTTCGAGGCGGGCGC  47 29
LOY33_RS15490 3448273 .. 3448290 +  -8.3  -3.72576   TCCCATATGTAACAC             CGCCGGC ACCG GCCAGCG              TTTCCTGCGCACCGC  66 82
LOY33_RS15495 NONE
LOY33_RS15500 3451057 .. 3451067 +  -2.4  -2.64144   GGCCGCCCCACAGGA                 GAGC CCC GCGC                 ATGTTTGACTACACC  38 7
LOY33_RS15505 3451713 .. 3451744 +  -2.2  -3.79687   GCCCGGCTGATGGCC      TGG-CGGCTGTTCCG TTA CTGAGGAGCTGTCCA      TGTTTTCTACAAGCT  53 5
LOY33_RS15510 NONE
LOY33_RS15515 NONE
LOY33_RS15520 NONE
LOY33_RS15525 3455295 .. 3455342 + -13.3  -5.10064   CGGATGTCGGCCTCT GAGTGAGTGCCGGGCGGGCCTC TCTGC GGGGCCCACCCGGCGCGC-CTG TTTTTCTGTCTTGCG 100 24
        abaF NONE
LOY33_RS15535 3458425 .. 3458442 +  -2.7  -3.22298   GGCCAAGCCCGCTCC             CACAG GTACACCA CTGTG              TTCATGGTCAGTGGA  44 72
LOY33_RS15560 3466739 .. 3466757 +  -2.3   -4.1964   GCGTACTTGAACGCG             GCGATGC ACTCG GCGTCGG             TTTTCGACTGTTCGC  62 180
LOY33_RS15575 3468195 .. 3468219 +  -6.4  -2.52464   GGCCGGTGTGCTGCT         CGACCTGCTCG GCCT CGAGCATG-CG          TGCCTTGACGCCGAA  45 346
LOY33_RS15590 3471720 .. 3471744 +  -3.3  -3.04398   TGGCGCGGCGCATGA          AGGGCGGGCAC TGA GGGCCTGCCAG          GTTTTGCCAAAGGAA  43 12
LOY33_RS15595 NONE
LOY33_RS15605 NONE
LOY33_RS15610 3474862 .. 3474872 +  -2.4  -3.02511   CGGCGCGGACATCGT                 GCGC AGA GAGC                 TCTTGAACCGATAAG  41 1
LOY33_RS15615 3475814 .. 3475824 +  -3.2  -3.39288   CAATGTGATGGGCCC                 TCTG CTG CAGG                 TGTTCTTCGCGGATG  48 358
LOY33_RS15635 NONE
LOY33_RS15640 3480687 .. 3480697 +  -8.2  -3.29461   GCATGCTGCAAGTGG                 CGCC GCT GGCG                 TTCTGAAACCGATTC  59 81
LOY33_RS15645 3481305 .. 3481320 +  -3.2  -3.05816   CGTGCGTTTTTATAG              CTGGAT GGAA ACCCAG               TTCAATAAAACCTCA  43 213
LOY33_RS15650 3481803 .. 3481834 + -10.2  -5.61881   CTACTCCTGACTGTT      ATTGC-AGCAGGCCG CCA TGGCCTGCTCGCAAG      TTTTTCTTTTTAGGC 100 111
LOY33_RS15665 3485202 .. 3485217 + -11.8  -5.28176   TTGAGTGTTGAAAAA              GCCCGC TTCG GCGGGC               TTTTTTGTGGGTGGC 100 56
LOY33_RS15670 3486787 .. 3486809 + -17.7  -5.05505   AGCTGCCCCAACCAG           GCCCGCGCC CACAA GGCGCGGGC           TTTTTGCTTTATCAT 100 53
        tusD NONE
        tusC 3487603 .. 3487623 +  -6.1  -3.57263   CAGGTGGTAACCCTC            TGATGAGCA CCC TGCACGTCA            TTTCCCACTCGCCCT  58 23
        tusB NONE
LOY33_RS15690 NONE
LOY33_RS15695 NONE
LOY33_RS15700 3490333 .. 3490376 + -16.9  -3.14344   CCCCTTCGCCAGCAA GGCTGGCTCCTGCAGTGGGTC GCGT GAACC--TGCAGGAGCCAGCC TTGCTGGCGAAGCTG  89 56
         aat 3498967 .. 3498977 +  -4.6  -3.21099   TTAATCCAAACGCAC                 CTCC CGA GGGG                 TTGATCATGACAGAG  49 84
LOY33_RS15740 NONE
        infA 3500028 .. 3500047 + -16.4  -4.67353   CGCTACACACAAGAA            CGCCCGGC CAGT GCCGGGCG             TTTTTGCGTGCCTGC 100 42
LOY33_RS15770 3507269 .. 3507299 + -14.8  -2.94633   TGGCTTGAGCTGACA       CACAGACCCCGG CCACGCA CCGGGGTTTGTG       CTTTCTGGAATCTGT  82 44
LOY33_RS15775 NONE
        mnmA NONE
        hflD 3509744 .. 3509773 +  -3.5   -4.4078   TCACCCTCAAAACCC       GGGCGCGTTTT TCATGTAT GATATGCGCCC        TTTTCGTTGCCCGAC  64 100
        purB 3511193 .. 3511211 + -17.4   -5.1356   GCCCCCGCGTTTTGA             CGCCCGGC TTG GCCGGGCG             TTTTTATTGCTGAAA 100 43
LOY33_RS15795 NONE
LOY33_RS15800 NONE
LOY33_RS15805 3514112 .. 3514126 +   -10  -2.57132   CCATTTCGCCCACAC               CACTGG CTG CCAGTG               CTTCTGACCAGCGAG  62 437
        aceA 3515586 .. 3515615 +   -15  -3.37464   TCGGGTAACACGCAA       GACCCGGGGCCT GTGATG GGGCTCCGGGTC        TTGTGCCATTCATAC  87 63
LOY33_RS15815 NONE
LOY33_RS15820 3517284 .. 3517319 +   -11  -3.50734   GAAGTCTGATCCAGC    GACCTGCCGCCTGTTC ATTC GAGCAGGCGGCCTGGC     TTCATTCTCTACGTT  74 32
        nuoC NONE
        nuoE NONE
        nuoF 3521038 .. 3521066 +  -2.9  -2.84878   GCCCGCGATGCTCGC        CCGGATGACGGCG AAC CGCAGGCATACAG        CTTTCCATTAGCCAC  41 75
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL NONE
        nuoM NONE
        nuoN 3531132 .. 3531161 + -16.5  -4.62471   GTGCTGATGCATTGA       CAGGACACCCCGC TTCG GCGGGGTGTTTTG        TTTTTGGCGATTGAA 100 41
LOY33_RS15880 3534067 .. 3534091 + -12.2  -3.14132   ACGCTCGCCAGCGGC         GCCTCAGG-GC AGTT GCACCTGAGGC          TTGGTCGCCACGAAA  73 40
        yegQ 3536925 .. 3536947 +  -4.7  -3.28712   TGCGCTTGCCCCCCT           CGCCCGGCA CGCTC TGCATGGCG           TTGTACACCCCAAGG  49 379
LOY33_RS15900 3539549 .. 3539561 +  -2.6  -3.57144   GAGGCTCGCGCGGTG                CTGG AACAG CCGG                TTTCACGCTAGGCCA  47 2
LOY33_RS15910 3540655 .. 3540688 + -26.9  -3.48276   ACACCCTGCACACAA     CAACGCCAGGCGCGA GCGG TCGCGCCTGGCGTTG      TTGTGTGCGCAGCCC 100 43
        xthA 3547815 .. 3547842 +   -15  -3.13907   AACTGAGTCATGCGC        TCGATGGCAGTC ATTG GACTGTCATCGA         TCTGTCTTAATCTGC  85 35
LOY33_RS15935 3549352 .. 3549375 +  -2.2  -3.12341   CAACTACGACGACAA          GGAGGGGCTC ATGA GCGCTCTGCC           GTTATTTCTCTTCGA  41 176
LOY33_RS15940 3550542 .. 3550552 +  -6.8  -3.06915   GGCCCGTCGGCCAGG                 CGCA GGG TGCG                 TTGCATCGCGTACAT  51 207
LOY33_RS15950 3552740 .. 3552760 +    -6  -2.52676   CAGGACGAGCGGGAG            GCACGCGC ATAAG GTGCGGGC            TGCGTTGCAGCCATC  48 14
LOY33_RS15955 NONE
LOY33_RS15960 3554396 .. 3554412 +  -2.9  -3.29704   TGGGTTTTAAAAAGT              TGGCACG GCA CCTGCTA              TATCTTTCGTACAAC  45 181
LOY33_RS15970 NONE
        ccoG NONE
        mapR 3558703 .. 3558761 +  -6.3  -3.07816   CCAACGCCCCATCGC ----GGGTCAAGCCCGCTCCCACATGA CTGCGGTGA TCCTGTGGGAGCGGGCTTGACCCGCGA TTGGGTCGGTGCAGC  52 57
LOY33_RS15985 3559652 .. 3559685 +  -3.9  -3.03159   GTCGTGAATGTGCTC     TCTATCCAGGCTGTAC AGA GTA-AGCCCGAATGGA     TATTCACCGAATTGC  45 3
LOY33_RS16015 NONE
LOY33_RS16020 3566021 .. 3566032 +  -3.6  -3.05384   GGATGAGTGGGCCAG                GCGT CGTA GCGC                 TTAGCTGAACCCGCG  45 10
LOY33_RS16025 3566712 .. 3566723 +  -3.6  -3.14931   TGTCGAGTCGTTCCC                GGTG CACA CGCC                 TTCCTCCAAGCTCGG  45 172
LOY33_RS16030 NONE
LOY33_RS16035 3568259 .. 3568288 +    -5  -3.09516   TTTCTCATCCCACCT       ATCTCCTGACTG CACACA CAATCAGGAGAA        TTCCGTGCTCAACCC  47 100
LOY33_RS16040 3570741 .. 3570765 + -14.4  -2.52464   TTCGCCGGCAAGGCC          GGCTCCTACA CGGCC TGTAGGAGCC          TGCCTTGCCGGCGAA  78 50
LOY33_RS16050 NONE
LOY33_RS16055 3575071 .. 3575081 +  -6.8  -3.64487   CGTGGTCCAGCAACG                 CCTG GCG CAGG                 TTGTTGCGCGTGTCC  61 504
LOY33_RS16065 3577908 .. 3577935 +    -4  -3.85817   TGTGGAGCGCAGGCG        CAACCTGCTGGT GACC GCCAGCGAGCTG         TTTCTGGAGCACGGT  57 90
LOY33_RS16075 3578849 .. 3578876 +  -5.6  -3.04263   TTGGCGTGGGTCGGG        TCGAACGGGCGCT GGA AGCCCTC-TTCGA        TCTTCAGCATCCAGT  47 390
LOY33_RS16090 3581982 .. 3581997 +  -4.6  -2.82623   ACGCGGCTCTGCTGC              CGGGCT GACC AGCGCG               TAGTTGTAGGCGCCC  44 18
LOY33_RS16105 NONE
LOY33_RS16110 3584932 .. 3584945 +  -3.9  -5.08824   GGCAACGGGCATAAC               GTTAA CACG TTAAC                TTTTTTCGCTCGCAA  81 72
LOY33_RS16115 3586323 .. 3586339 + -15.1  -3.53012   GTGGTAATCGCCGAG              GGGCCGC GTG GCGGCCC              TTTCGCGGGGCAAGC  88 34
LOY33_RS16120 NONE
LOY33_RS16125 3587991 .. 3588010 + -12.1  -3.05844   GCGGGTGATGTAGGC            GCCGGCC TTGTCT GGCCGGC             TCTTGACCTGCACAG  73 28
LOY33_RS16130 3590699 .. 3590714 +  -7.5  -2.54812   GCCTTGGGGACAGCT              GCGGC ACAATG GCCGC               CTTGCTCCTCTGCCT  50 99
LOY33_RS16135 3591961 .. 3591977 +  -3.7  -4.62069   CGACGGAATGTGTTT              TAATGCG TCG CCCATTA              TTTTTGACATCAAGG  70 51
LOY33_RS16140 3592586 .. 3592609 +    -6  -2.61264   TGGCTCGGCCTCGCT          TGCCGCTTGCA GCT TGCAA-CGGCC          CTTCTACATCCAGCC  48 65
LOY33_RS16150 3594891 .. 3594908 + -12.7   -4.7497   AGGCGAATTGAAAAA             GGCGACC TTCG GGTCGCC              TTTTTCATGCGTGCC 100 44
LOY33_RS16170 NONE
LOY33_RS16175 3597671 .. 3597683 +  -3.3  -3.17075   GACCCTCCGGCAGCC                AGCAC CCT GTGCG                TTCAATTGAAGGAGC  43 55
LOY33_RS16180 NONE
LOY33_RS16185 3599436 .. 3599468 +  -5.5  -2.57795   ACCGCTGATGGCCGA     CGCCTGGCAACTGC GCGGCG GCGGTGG-CGGGCG      TACCTTCGTGGTGCC  46 90
LOY33_RS16195 NONE
LOY33_RS16200 NONE
LOY33_RS16205 NONE
LOY33_RS16210 NONE
LOY33_RS16215 NONE
LOY33_RS16220 NONE
LOY33_RS16225 NONE
LOY33_RS16230 NONE
LOY33_RS16235 3608948 .. 3608968 + -13.3  -4.09685   CAAGCTGCACACGGA            TGCCTCGTC CCT GACGGGGCA            TTTTGCCGACTGCGA  95 45
LOY33_RS16240 3611701 .. 3611711 +  -2.4  -2.70932   CTGGGCATGCCGTGA                 AGCG CGC CGCC                 TGATTGAAGCGCCCC  39 26
LOY33_RS16245 NONE
LOY33_RS16250 NONE
LOY33_RS16255 NONE
LOY33_RS16260 NONE
LOY33_RS16265 NONE
LOY33_RS16270 NONE
LOY33_RS16275 3619856 .. 3619882 +    -5  -3.22884   AGCTGCAGCATCAGC         CGGTCGATATCC TGC GGATGCAGGCCG         TTGGTGGGTTCGTCG  49 249
LOY33_RS16290 3623999 .. 3624020 +  -5.8  -3.33261   CAGCGAACGCACCGG           GGCGTCGA CCTTGA TCGACTCC            TTCTGGCCCTTGGCG  51 163
LOY33_RS16305 3626451 .. 3626489 + -18.1  -3.53224   GCGGGGTTTTGTTTC   CCTGCGGGCGGCGTGAT CGACT ACCATGCCGCCCGCCGG   TTTCCACACGGAATC 100 46
LOY33_RS16310 NONE
LOY33_RS16315 NONE
LOY33_RS16320 NONE
LOY33_RS16325 NONE
LOY33_RS16330 3631485 .. 3631513 +  -4.5  -3.90048   TCTGCCACACCGGGT        CGGCTTCCACATC GAT GATCTCGAAGCCA        TGTTTTTGCCAGAAA  61 79
        glcD NONE
        glcE NONE
        glcF NONE
LOY33_RS16370 NONE
LOY33_RS16375 3642287 .. 3642297 +  -6.8  -3.63569   CCGGCAACTACACGA                 TGGG CAA CCCA                 TTGTTGACCACTTCC  60 99
LOY33_RS16390 NONE
LOY33_RS16395 3646757 .. 3646782 +  -3.2  -3.33737   ACTTGCGCGTGCCGG         CATGGAAGCC CTGCAT GGCTTCGAAG          TTCTCGCGGTTGATG  46 219
LOY33_RS16410 3651493 .. 3651512 + -12.8  -5.24129   GTAGCGATGCAGAAA            GCCCGCCG TGAC TGGCGGGC             TTTTTTGTGGGGAAG 100 45
LOY33_RS16420 NONE
LOY33_RS16425 3657312 .. 3657360 + -10.8  -2.76696   AGCAATAGGCATCTG CTCACGACAGCAG-GCCCAGCGC GAAC GCGCGGGCCACCGCTGCCGTGCG GTTCTTGCCGCCGAG  63 33
LOY33_RS16475 NONE
LOY33_RS16480 3670561 .. 3670577 +  -2.2  -2.62184   CAGCAAGGCATTGAG             CGGCACG CCCT TG-GCCG              TGGTGTGCGAGAACA  38 524
LOY33_RS16490 3672503 .. 3672527 +   -15   -3.0094   ACCCAGCCACTTGAA          GGCTGACGCC ACCGC GGCGTCGGCC          TCTGTGTGCCTGCCC  84 47
LOY33_RS16495 NONE
LOY33_RS16500 NONE
LOY33_RS16505 NONE
LOY33_RS16510 NONE
LOY33_RS16515 NONE
        fabD NONE
LOY33_RS16525 NONE
LOY33_RS16530 NONE
LOY33_RS16535 3692980 .. 3693031 +  -3.4  -4.29432   TGCACGCAGAACAGC CGGTCGGCGTTGGAGGCTGCTTCG CCTT CGCCGAAGGTGCCGACGCCGATGG TTTTGATCGCGTTTG  63 218
LOY33_RS16555 3695588 .. 3695624 +  -9.3  -2.63301   TGGGCAAAGCAGTAA    ACTTAAGGCCGCTGGAG CAT CTCCAGGGGCCTCCAGA    TAATATCCCGCTATC  60 26
LOY33_RS16570 3699471 .. 3699492 + -14.5  -4.88067   GCGCAACATAAAATT           GGCAGGATG ATTA CATCCTGCC            TTTTTATGCCTCAAT 100 43
LOY33_RS16650 NONE
LOY33_RS16655 3712652 .. 3712667 + -10.4  -5.64274   GACGAATTAAAAAAA              CCCGTC CTTG GACGGG               TTTTTTTGTGCCTGC 100 46
LOY33_RS16670 3714286 .. 3714306 +  -3.2  -3.61398   GCATCCAGAATATCG           CC-CACCAG CTTG CTGGCGTGG            TTGTTCAACCCGCGA  49 280
LOY33_RS16710 3722398 .. 3722433 +  -8.9  -3.23393   TGAGTGCAGTAGCCC    GG-CAGGCCGCCCTTC CTACA GCGGGGCGGCCTAACC    TCTTGTAACCTCGCC  63 38
LOY33_RS16715 3722870 .. 3722885 + -10.4  -2.81045   CCCTGCTCCGACTTG              TCGCCC TTCT GGGCGA               TGGTGTTATCCATAG  63 67
LOY33_RS16720 3724272 .. 3724301 +  -7.7  -2.78463   AGGTCACCTTCATGA       TCGGGCCCAGCAC CGCA GCGCTCTGCCCGA        TATGGTCGGCGGCCT  51 314
LOY33_RS16735 3727378 .. 3727409 + -22.4  -3.15544   GAAAGCGCCAGCGTT      CAGGCCAGCGCCTG CAGG TAGGCGCTGGCCTG       TTGATAGCGCTGCAG 100 5
LOY33_RS16755 3729976 .. 3730005 +  -4.1  -3.07222   ACGGGTCCAGCTGCG       CCACGC-ACGGCAG GCT CTGCAGCAGCGCGG       TATTGGCGTCGTAGT  44 488
        gloB NONE
LOY33_RS16785 3736385 .. 3736410 + -15.4  -3.98256   CAGGCCTGCCTGGCC         GCGGCCCCGG CGATCT CCGGGGCTGC          TCTTTTTCCTGCCGA 100 50
LOY33_RS16790 NONE
LOY33_RS16795 NONE
LOY33_RS16800 NONE
LOY33_RS16805 NONE
LOY33_RS16810 NONE
        fabI 3744707 .. 3744732 + -17.7  -4.37886   AGGTTGGCAGGATGG         GAAAAGGCCGC TGAT GCGGCCTTTTC          TTTTGTCCGGGATCC 100 40
LOY33_RS16855 3756003 .. 3756022 +   -15  -3.59979   CCTTCGCCGGCCATG            CCGGCTCC TGCA GGAGCCGG             TTTGGCGTCCACAAC  88 53
LOY33_RS16860 NONE
LOY33_RS16865 3757663 .. 3757674 +  -2.2  -2.95388   CCTGAGCCCCGAACA                CCGT CTCG ATGG                 TATGTGCATTCAGTA  41 107
LOY33_RS16900 3765010 .. 3765027 + -11.3  -4.76963   CACTGAAACGCGAAA             GCCACCT TGAT AGGTGGC              TTTTCTGTTCTATAG  95 49
LOY33_RS16905 3765683 .. 3765706 + -12.4  -4.16943   AGCTTTTAAAGCAAA          GGCGCCGGAT TTTC ATCGGGCGCC           TTTTAGAATATGGGG  90 229
        folD 3767094 .. 3767113 + -13.6  -5.78622   TAGCCACTAAAGGAA            CGGCACCT GAGA AGGTGCCG             TTTTTTTTGGCCTGG 100 69
LOY33_RS16930 NONE
LOY33_RS16935 NONE
LOY33_RS16940 NONE
LOY33_RS16945 NONE
LOY33_RS16950 NONE
LOY33_RS16955 3774011 .. 3774034 +    -8  -3.78775   GCCCGGGCCTGCACG          GCCCGGTGCG CTGT CGCACCCGCC           TTTGGTCCTACCGAG  66 52
LOY33_RS16960 NONE
LOY33_RS16965 NONE
LOY33_RS16970 NONE
LOY33_RS16975 3776831 .. 3776841 +  -2.4  -3.28712   CGGTGGTGAAGAACA                 CGGC GCC GCAG                 TTGTAGCGCCGGCCC  44 9
LOY33_RS16990 3780702 .. 3780719 +  -5.5  -3.23853   TGCCCTCGCAAAAGC             GTGACAG GCGC CTGCCAC              TGTTGCTTGAAGCGC  51 45
LOY33_RS16995 NONE
LOY33_RS17000 NONE
LOY33_RS17005 3783694 .. 3783704 +  -8.2  -3.53012   GCCTGGATTGAGAAT                 GGCG GTG CGCC                 TTTCGCCGGCAAGGC  62 30
LOY33_RS17010 3784570 .. 3784586 +  -5.1  -3.39327   ACACCTTCTTGCCCT              GGTCATC GCG GATCACC              TTGTGGGTGTACCCC  53 394
LOY33_RS17035 NONE
LOY33_RS17040 3791823 .. 3791846 +  -5.2  -2.55551   CCATCGGCCGCCCAG          GCGGTCGATGG CAC CC-TCGCCTGC          TGCGTTACGGTTATA  46 54
LOY33_RS17045 3792765 .. 3792823 + -34.9  -3.49419   CAGCGCGTCGACGCC ATTCGCCGGCAAGGCCGGCTCCTAC CGTGATCAT GTAGGAGCCGGCCTTGCCGGCGAAG CTTTTTATGACGCAA 100 55
LOY33_RS17050 NONE
LOY33_RS17055 NONE
LOY33_RS17060 3796565 .. 3796583 +  -2.4  -3.23216   TGAACATTGGCCATT            CGCC-GA TAACAC TCAGGCG             TTGCTCGTGGTCCAG  44 42
LOY33_RS17065 NONE
LOY33_RS17070 3797413 .. 3797426 +  -3.1  -3.65991   CGAGCCAGGGAGGCC               CG-GCA TGT TGCACG               TTCTGTTCCACCGCT  52 59
LOY33_RS17075 NONE
LOY33_RS17080 3800030 .. 3800044 +  -4.2  -2.62735   GCATCGTGCGGCACT               CGCG ATGAAGC CGCG               TGGTATCGACCGTAT  42 18
LOY33_RS17085 3800747 .. 3800760 +  -8.1  -3.85698   GCTGTGGGATTGAAC               GCCAG CAAA CTGGC                TTTGTGCAGAAGCCA  68 28
LOY33_RS17095 3803514 .. 3803536 +  -6.9  -3.53091   GAAGAACATCACCAG           TTGCGCCGC TACCC GCAGCGCGA           TTTCACGGCCCAGGT  58 434
LOY33_RS17105 3805129 .. 3805174 +  -3.8  -3.31415   TGCGCAGCAGGTGCC GGCG-CACCTCGCGCCTTGCCG GCAC CTGCT-GGCCCGTGGTGGCGTC TTCCATTTCCTGCTC  47 308
LOY33_RS17115 NONE
LOY33_RS17120 NONE
        neuB NONE
        neuC 3809308 .. 3809327 + -12.8  -3.40299   GCCGATGGCAGAAAA            CGCCCCGT CAGT GCGGGGCG             TTATGCGTCTGGTGA  79 183
        dusA 3810968 .. 3810991 +  -3.8  -2.66316   GCCTGCCGCACAGCC          CTTGAGCG GCCGGCAG CGCTCGGG           TAATGTCGTCCAACC  42 87
         tal NONE
LOY33_RS17155 3814500 .. 3814520 +  -3.9  -2.79289   TTCAGAACAAAGGTG            CCATTCTGC TCG GCAAACTGG            ATTCTTCCAGTACTC  41 511
LOY33_RS17170 3816306 .. 3816321 + -11.8   -4.7497   AGCAGGCATGAAAAA              GGCGGC CATG GCCGCC               TTTTTCATGCATCAC 100 43
LOY33_RS17180 3817902 .. 3817929 +  -5.4  -2.89668   CTGAACAGCGAGGCA        CGGACCTTTCGC CCGC GCGCGGGGTCCA         TGTCTGAGCCTATTC  48 90
LOY33_RS17185 3818246 .. 3818267 +   -13  -4.90266   GCGGCAAAAACGAAA           GCCCCGTC ACACTG GACGGGGC            TTTTTCGTTACTGGC 100 46
LOY33_RS17200 3820505 .. 3820550 + -11.1  -3.38991   CTACGTGCTCGAGGA GCGTCCGGCGTGATGCGCAG ATTGTCC CTGGGCG-CACGCCTGGCGC TGTTGTTCGCCGCCT  73 13
LOY33_RS17205 3822311 .. 3822325 +  -4.2  -2.70298   GATGGTACGCAGGAT               GGCG ATGTCCG CGCC               CTTGTCGTTCACCAC  41 464
LOY33_RS17225 NONE
LOY33_RS17230 3827019 .. 3827039 +  -6.8  -2.62616   CCTGGGTCAGCTCCT            GCTCGTTC TTGCC GATCGAGC            TGATCTCCGGAATGG  47 379
         mfd NONE
LOY33_RS17255 NONE
LOY33_RS17260 3838114 .. 3838125 +  -3.6  -3.32343   CAGCGCCGCGAGAAG                CCGG CCGG CTGG                 TTATCGACCTGTGGA  47 436
        lexA NONE
LOY33_RS17285 3841484 .. 3841504 +  -5.3  -3.25787   GATACTGACGGTCAG            TGCAGAACC CGT GGGCCTGCA            TGTTCCTGTTCGATC  51 96
LOY33_RS17330 3851094 .. 3851124 + -21.3  -3.27498   GGCCGACTGATACCA       GAAGGCCCGCTGT TGGAC ACAGCGGGCCTTC       TTCATATCAGCTGTC 100 31
LOY33_RS17340 3855195 .. 3855229 +  -4.9  -3.28712   CGATCAGTAAGCGGT    GATCAGCGCTTCGCCG GCAA CGTCGAAGCGCA-ACC     TTGTGGAGGCGACGG  49 31
LOY33_RS17355 3858365 .. 3858385 +  -5.3  -3.53444   TTGCCCCAAACGCCT            GTTGGGCGA TAT TCGACCGGC            TTTCAACAGCGATAC  55 430
LOY33_RS17360 NONE
LOY33_RS17365 3860427 .. 3860451 +  -7.1  -3.01791   GTGCTGGCCGTGACC          TGGCTGCCG AAACCGC CGGTGGCCA          TGTTGAGGAACACCT  51 487
LOY33_RS17375 3862605 .. 3862617 +  -4.7  -4.19238   AGCGATCGGCTGAGG                CCCGC CAG GCGCG                TTTTCGCATTCAGCC  64 28
LOY33_RS17380 3864016 .. 3864027 +  -2.2  -3.35679   CTGCGCAGCACACCC                GAGC TCTG GTTC                 TTGTAGATCAGCGCC  46 129
LOY33_RS17395 3866082 .. 3866125 +  -3.2  -6.11644   CTGTAAAAGGCAGTA C-AGA-CGGCAAGCTTCAGGC CCCTC GCC-GGGGCTTGCCGGTCGCG TTTTTTTTTGAGTAG 100 35
LOY33_RS17400 3866233 .. 3866278 + -29.3  -2.80935   CTCTCCGACCAGATC GGCAGAAACCACAAAGCCCGC TTTT GCGGGCTTTGTGGTTTCTGGC TGTACTGCATCCGCT 100 30
LOY33_RS17420 3872361 .. 3872378 +  -9.8  -5.28778   CCCTATTCAAATCAA             CCCGGC CCTGGT GCCGGG              TTTTTTATGCCTGGT 100 42
LOY33_RS17430 3875480 .. 3875493 +  -6.7  -3.04792   GATCCAGACGACGCA               GGTGA CACG TCACC                TCTTCACGGTCGTGA  51 353
        acnA 3879518 .. 3879541 +   -21  -2.52464   AGCTAGCCTGAAGCA          GGCCCGGCGC CGTT GCGCCGGGCC           TGCATTGGCCCGCCG 100 35
LOY33_RS17450 3881465 .. 3881496 +  -5.8  -3.28712   TTTCGAAGTAGCGCT      CCTGCCCATCGAGCG GGT CGTT-GAAGCGCAGG      TTGTGGGCCAGCAGC  51 104
LOY33_RS17475 3885767 .. 3885779 +  -4.8  -3.54741   TGGGTTATGGTTTAT                CGAC CGGCC GTCG                TTTCGCGCCCTGATC  53 135
LOY33_RS17480 NONE
LOY33_RS17485 NONE
LOY33_RS17490 3886968 .. 3887009 + -12.9  -2.78384   TCTTGCAATACGAGG CGGCGGGCCGCAGGCTT-GC CGT GCTGAGCATCCGGCCAGCCG TCTCGTAAAAACAAG  73 58
LOY33_RS17495 NONE
LOY33_RS17500 3889702 .. 3889760 +  -9.1  -3.64822   AAAATCAACTATTTG TAGCTTTGCGC-CCAACTTATTGTAGGA ATTT TCCCATATTAAGTTTGAGCGCAAATCTA TTTACGTGCACGCCT  69 137
LOY33_RS17505 3890436 .. 3890446 +  -2.4  -2.64616   GATCGAGATGGCCAA                 ACGC AAC GCGC                 TGGTATGAGTGCGAG  38 7
LOY33_RS17510 3894124 .. 3894146 + -16.3  -3.55071   AGGGGTAGAACGCAA           GCGGCAGCC ACCAG GGCTGCCGC           TTTGACGAGGTATCA  90 33
        dacB 3896268 .. 3896298 +  -8.9  -2.54723   ACATCCTGCGCGTCA       TCAGCGCGCCTGG ATGCG CCATGCGCGGTGG       ATCTTGCTGTTGCGC  57 111
LOY33_RS17530 3899283 .. 3899302 +   -15  -5.24531   CGGGCTGCGGCCCAG            GGGCCCCT TTTG AGGGGCCC             TTTTTTATGCCCGCT 100 86
LOY33_RS17580 3909625 .. 3909650 + -14.7  -4.68593   CCACCCCGCCAAAAG         AAAGCCCCGGC ACAG GCCGGGGCTTC          TTTTTACCTGCTACA 100 72
LOY33_RS17590 NONE
LOY33_RS17595 NONE
LOY33_RS17600 3916702 .. 3916722 +   -14  -4.64676   TGAACATCACGTGAC            GGGCGCTG CGGGT CAGCGCCC            TTTTCTTCGCACTAC 100 38
        lhgO NONE
LOY33_RS17610 3919470 .. 3919483 +  -5.2  -2.78813   TGGATTAAAGTATCA               GCCC CTGCCC GGGC                GTTGTTGCCCTCCCC  47 117
LOY33_RS17615 3920474 .. 3920494 +  -4.6  -3.34398   ATCCTCGACGTCGTC            GCCGTGGC CTGAA GCCATGCC            TCTTTCAGCGCAGGC  51 14
LOY33_RS17620 NONE
LOY33_RS17625 NONE
LOY33_RS17630 NONE
LOY33_RS17635 NONE
LOY33_RS17640 3926334 .. 3926347 +  -2.3  -3.28712   TCCCAAATAACGCGG               CGCCT GCGC AGGGG                TTATCGCAGCCCCCA  44 31
LOY33_RS17645 NONE
LOY33_RS17650 3931294 .. 3931308 +  -2.1  -2.50699   GTTGAGCACGGTGGA               GGTCA GCGGA TGATC               CTGTATTCGTTCCGC  38 13
LOY33_RS17655 3932330 .. 3932348 +  -6.7  -3.31157   GGTCTGCGCATCGCG             CCGGATC ACCAC GATCTGG             TTGCTCTGCTGGTTG  54 459
LOY33_RS17715 NONE
LOY33_RS17720 3946054 .. 3946064 +  -2.4  -2.72049   CGCCATCAAGAGCGC                 GGCC ATT GACC                 TGATTGACCGATATG  39 103
        cybB 3947021 .. 3947066 +  -2.5  -2.87463   CACCAGGCGTCGTAA TCG-G-CCCAGCCCACGGCCGC CAGCT GCGCCCGCGC-CTGGGTCACGA TCTGTGCGCAGCCTT  40 405
LOY33_RS17775 3962808 .. 3962836 +  -5.1  -2.88544   ATCGATCCCAGCATG        CTCGCCTTGGCGG CCA CCGCTATGGGCAG        TGTCTCGGAGTCCAG  46 508
LOY33_RS17790 NONE
LOY33_RS17795 3967298 .. 3967331 + -13.1    -3.214   TCGACCGTGATCGGC     GC-CGCATCCTGGGGC GGC GCCACAGGCTGCGAGC     TCTTGCTGTCGTCGA  72 413
LOY33_RS17805 3970357 .. 3970372 + -10.4  -5.87996   GCAGGCACAAAAAAA              GCGACC CTAA GGTCGC               TTTTTTTGTTGCTTC 100 125
LOY33_RS17905 NONE
LOY33_RS17910 3993823 .. 3993840 + -12.7  -3.40597   ACCGGGCACAAAAAA             GGGCACC CGAA GGTGCCC              TCTTTCACTCAGCCC  79 97
LOY33_RS17965 NONE
LOY33_RS17970 4002817 .. 4002844 +  -6.9  -3.28712   GCCCTTGGGCACGAT        GCCGTTGGCCT CGTTGA AGGCCATCTGC         TTGTCGCGGCGACGC  54 402
LOY33_RS17980 4006060 .. 4006072 +  -4.8  -3.19246   CTGTAACACCTGATT                GCTC AGGGG GAGC                TTGACTTCCCCTTAG  49 35
LOY33_RS17985 4006229 .. 4006259 + -14.9   -4.4261   AGCCTCTGAAATACT      CG-AAAAACCCGCC TTTT GGCGGGTTTTTTCG       TTTTGGTCTTCAGCC 100 67
LOY33_RS18070 4020184 .. 4020199 + -11.8  -4.90266   ACCAGCAATAAAAAA              CCGGCC ATCT GGCCGG               TTTTTCATTAATCAG 100 53
         rne 4026842 .. 4026867 + -20.5  -5.11063   GACGGCCATTAAAAA         GCCCCGCCAGT GCAA ACTGGCGGGGC          TTTTTATTGCCTGCT 100 39
LOY33_RS18135 4034705 .. 4034717 +  -4.8  -3.14132   GTCATCGAAGTTGCG                CGCA AACAC TGCG                TTGATGAAGCCCAGC  47 272
LOY33_RS18155 4039557 .. 4039590 + -16.1  -4.34402   CACTCCAACGGGACA     TCGGGCGCGGGGAG CCTTATA CTCC-CGCGCCCGA     TTTTGCTCTAGAGGA 100 45
LOY33_RS18160 4040182 .. 4040201 + -13.6   -5.0538   TATCGAAACAAAAAA            CGCCGTTC ACAT GAACGGCG             TTTTTTCAGCTGGAA 100 180
LOY33_RS18220 4051334 .. 4051350 +  -3.6  -3.14931   AACCCATTCGCCAGC              AGCTCC CGACA GGAGCC              TTGCTGGCGAATGGG  45 50
LOY33_RS18235 4055602 .. 4055624 +  -7.6  -4.46212   GACCACCAGCACCGC           CCTTGCCGGG TAA TCCGCCAGGG           TTTTCTGCTCGCCCC  79 430
LOY33_RS18250 NONE
        htpX 4058595 .. 4058614 +   -15  -4.98531   GCAGGCAAACAGGAA            GGGCGACC CACG GGTCGCCC             TTTTTCATTTCAGCG 100 48
LOY33_RS18265 4060217 .. 4060235 + -10.3  -5.00138   CCCAGGCAAAAAAAA             TCCCCGA ACCAG TCGGGGA             TTTTTCATTTCACTC 100 92
LOY33_RS18280 NONE
LOY33_RS18290 4066375 .. 4066401 +    -5  -2.83403   GCGAGCTGCGCTGGC         AATAGCGCGCAT AGC ATGCGCGCCACC         ATTTCATGGACCAGA  44 21
LOY33_RS18295 4066925 .. 4066940 + -11.8   -4.4261   CAGGGCATAAAAAAA              CCCGGC CTTG GCCGGG               TTTTCGTGTTCGCGC 100 61
LOY33_RS18310 NONE
LOY33_RS18315 4070072 .. 4070101 + -11.5  -3.14132   CGCGCCGCTGCCAGC       CTGGAAGTCCA-CC AGA GGCTGGTCTTCCAG       TTGCTCCAGCGCCAG  66 361
LOY33_RS18325 4072013 .. 4072035 + -11.9  -3.15574   CCCTTCAGGTAACAT           GGCGCCCCG CCTGC CGGCGCGCC           TGTTGCTGGCCTTCA  73 79
LOY33_RS18330 4074681 .. 4074693 +  -6.3  -2.83715   TGCTTGGGATCGTCC                TCGAA CTC TTCGA                TGTCATCCTCGTCCA  48 484
LOY33_RS18350 4076045 .. 4076077 +    -4    -4.386   AAGCTTTAAGTTTGC     CCCGG-GCTGTGCAC AACC GTACACTGCGCCGCG      TTTTGTCCGGGGTTA  65 118
LOY33_RS18355 NONE
LOY33_RS18360 4078137 .. 4078166 +  -7.1  -3.15544   GGGCAACTGGGTAAC       CTGGTCCTGGTGG CTGA TCAGCAGGGTCAG        TTCCTCCACCTGCGG  52 305
LOY33_RS18370 4080087 .. 4080115 +  -3.8  -3.74693   TCATGCTCGAACTCG       CCGATG-CCGCCA TAGG TGGCGAACATCAG        TTTGCTCAACTCCAG  54 159
LOY33_RS18400 4086490 .. 4086508 +  -5.8  -3.15574   ATCCACAGCACCTTG             GCCCCGCC ACT GGCGCCGC             TCTTGATCACGTTGA  49 164
LOY33_RS18410 4088124 .. 4088151 +  -5.6   -4.1196   GCGATGCGCTCGATT        TCGGCGTCCGG AAGGCAG CCGGA-GCTGA        TTTTGCCGATGAGTT  64 491
LOY33_RS18425 4089345 .. 4089378 +  -8.9  -2.52464   TTTGCTGGCAAGCCA     GTGCCCACAGG-ATCA TCT TGGTTCCTGTGAGCGC     TGGCTTGCAAGCCAG  57 55
LOY33_RS18445 4093381 .. 4093402 +    -3  -2.62184   CGATAAGCCGGTGCA          GGC--GTCGC CCTT GCGACCCGCC           TGCTGTGCACAAAAG  40 85
LOY33_RS18450 4094342 .. 4094352 +  -3.2  -3.62597   GCAAACAGCGCCTGA                 TGCT GCC GGCA                 TTGTTCGGCCGTGAG  53 142
LOY33_RS18460 4096033 .. 4096060 +  -6.9  -3.53811   AGTGGAACCACTCTG        GGGCGTTCGGG TCCAAC CCCGGATACCC         TTTGAGGAAAGTCGG  60 55
LOY33_RS18465 4096426 .. 4096442 +    -5  -3.05384   AGTCGCGTAAACTGC              GCCGCC CAGGC GGAGGC              TTACATGCAAGACGA  47 57
LOY33_RS18470 NONE
        folE 4097638 .. 4097657 + -13.6  -5.32944   GCCGAGGTTCTGCGA            GCCGACCT GCCC AGGTCGGC             TTTTTTCATTGTGAG 100 44
LOY33_RS18480 4098245 .. 4098259 +  -2.7  -3.74519   TCGAGTACTTGTCAC               CGACC AGGTA GGGCG               TTTCCTGCAACTGTT  53 218
LOY33_RS18490 4100136 .. 4100168 +   -12  -3.16742   GGTGAATGCCGCACC      GTCGCTGCACAGGT ACAGG ACCGCTGCAGCGAC      TTCCTCGACCTTGCC  66 124
LOY33_RS18500 4102092 .. 4102119 + -12.7  -3.14132   CGCCTTCGCCAGCAA        GGCCGGCTCCT CCTTGT AGGAGCCAGCC         TTGCTGGCGAAAAAC  76 47
LOY33_RS18510 4103198 .. 4103211 +  -5.2  -3.28712   AAGACCGATAAGCGT               GGCG CTTCCC CGCC                TTCTGCAGGCGCCGG  51 30
LOY33_RS18520 4104666 .. 4104678 +  -3.4  -3.28119   CACCAACCAGGCCTC                GCAT CTAAA ATGC                TTGCTATCAGTGCAT  45 18
LOY33_RS18525 4105719 .. 4105735 +  -2.1  -4.07568   CCTCATCGCCTATAA              GCAGTTC TTC GTACAGC              TTTTCCCCAGGGCGC  58 304
LOY33_RS18640 NONE
        ubiG NONE
        mupP 4135669 .. 4135679 +  -2.4  -3.05844   CTCACCACGATCTCG                 AGGG AAT CCCA                 TGTTCGACTACACCG  41 129
LOY33_RS18655 4136667 .. 4136682 +    -6  -3.53091   CTCAGCCATTTCATG              GCGCGC TTGC GCCCGC               TTTCGGGAAAGCCGT  56 273
LOY33_RS18695 4146006 .. 4146023 +  -3.3  -3.15996   GAATACGCGTCCCAC             TTGTCGC GGTT GCGCCAG              TCTTCCTCGGTGATC  44 290
        mnmC NONE
LOY33_RS18710 NONE
         ngg NONE
LOY33_RS18720 4154293 .. 4154349 + -10.4  -5.49569   GCTAGCCACATGCAG GCCACA-TG-CAGGAAAGGTTTCGCGTA GCA TGTGCGAAACCTTTCCTGATTCTGTAGC TTTTTTATGTTGATA 100 36
LOY33_RS18725 4154621 .. 4154635 + -11.4  -2.70354   CCCTTGCCCAGTTGC               TCGGCG ATA CGCCGA               TAGATTTCTGCACGG  62 57
LOY33_RS18745 4156510 .. 4156523 +  -9.5  -5.84381   CCCCACATAAAAAAA               CGGCC CGAA GGCCG                TTTTTTTATTGCTCA 100 61
LOY33_RS18765 4161304 .. 4161321 +  -3.3  -3.06796   CTTCGCCGGCAAGGC             CGGCTCT GCAG GGAGACG              TTGAATCCGGTAGGC  43 50
LOY33_RS18775 NONE
LOY33_RS18780 4164102 .. 4164128 +   -10  -3.06915   GCACAGCTCGCCCTG         CTTGGTCAGCGC GTC GCGCCGGCCCAG         TTCGATCAGCTCGCT  60 77
        minC 4167202 .. 4167215 +  -3.8  -5.27938   GTTTGGATATTTCTG               GGAC CTCAAC GTCC                TTTTTCTTTAGGGGT  84 87
        minD NONE
        minE 4168330 .. 4168388 +   -42  -3.53012   GCACAGGGGTAACCT -GCC-ACGGCGGCGGCCGGGCCCGGGCT CATAC AGCCCGGGCCCGGCCGCCGCCGTTGGCG TTTGCAGAGAACACG 100 46
LOY33_RS18810 4169020 .. 4169035 +  -3.2  -3.40403   CGAACGACTGCGCTT              CGAGTGC CCG GCGC-CG              TTCTGATACACCGCG  47 4
LOY33_RS18815 4170584 .. 4170600 +  -6.5  -2.90723   CCCCCATCAACCCGC              GCGCAAA CAT TTGGCGC              TATGCTTGCCCATCA  51 133
LOY33_RS18820 4170825 .. 4170846 +  -2.2  -2.52834   GACAAATGCTCTACA           CTCGGGCG ATTGAG TGTTCGAG            GTTGATCGTCCGGTG  38 39
LOY33_RS18825 4173070 .. 4173118 +  -6.8  -2.62184   TCGTGGCGCCAGTAC TCCAGGTCG-CAGTCGATCAGC CGCCCGT GCTGGTCG-CTGTTGACCCGGG TGATATGCAGGCCGG  47 68
LOY33_RS18835 4175154 .. 4175198 + -33.8  -2.83343   GATGGAGTGAAACCA TCGCGGGTCAGGCCCGCTCC CACAA GGAGCGGGCTTGACCCGCGA TGTGGTCATCGCTGT 100 31
LOY33_RS18840 NONE
LOY33_RS18845 NONE
LOY33_RS18850 NONE
LOY33_RS18855 NONE
LOY33_RS18860 4179455 .. 4179467 + -10.5  -2.71364   CGCCAGTTCGGCATA                CGCCG CCT CGGCG                TCCTTCACCGCATAG  57 154
LOY33_RS18870 4182643 .. 4182670 + -17.8  -5.42259   TCTGTCGTGAAATAA        GGGACTGGGCGCC GAT GGC-CCCAGTCCC        TTTTTTTCAAGGTAG 100 99
LOY33_RS18875 4184863 .. 4184897 +  -4.2  -3.64703   CTCCCAGGCCAGGCT    GCGGCGGATCGCG-GC ATCCG GCTCGCGCTCA-CCGC    TTTCAATCAGCGCCA  54 420
LOY33_RS18905 NONE
         map 4189188 .. 4189218 + -13.3  -3.53811   ACGCTCCGTGGGGCC      GCGCCGTACGGGCA TCCC TGCCCGT-CGGCAC       TTTCCGGGCCATCCA  83 306
LOY33_RS18915 NONE
LOY33_RS18920 4192970 .. 4193005 + -13.3  -2.79302   TGGACTGCTGGGTGG    CCAGCACCTGGCTGA AGTCGC TCAGCCAGGTGCCGA     TCTGCTCGCGCTCAT  67 96
LOY33_RS18930 NONE
LOY33_RS18935 4196354 .. 4196369 +    -4  -2.71924   TGGCAAGGTTGACGG              CAATGA ATCG TCGTTG               GTTTGAACGCGAATA  43 54
LOY33_RS18940 4198924 .. 4198941 +  -9.8  -4.99435   AGGCTGTCTGGAAAA             GGCGCC CTCAGC GGCGCC              TTTTTCGTTGTTGGA 100 50
        rdgC 4200341 .. 4200351 +  -4.6  -3.14931   CATAGCTATATAGAG                 GCCT TGC GGGC                 TTCATCGCGGGTCAA  47 55
LOY33_RS18960 NONE
        sugE 4201902 .. 4201925 +  -7.4  -3.54424   GTTCGCTGACCCGCT          C-GCGCAACAG CGC CGGTTGCGCCG          TTTCCACCGGTACGG  60 77
LOY33_RS18980 4206755 .. 4206767 +  -3.3  -3.28712   GGCGGCGAAGAACAG                CACCA GGC TGGCG                TTGTGCAGCGCCAGC  46 375
LOY33_RS18990 NONE
LOY33_RS18995 4212121 .. 4212141 +  -6.8  -3.39327   TACAGCCAGCCGGCG           CGCTCGGCG ATCT CGC-GGGCG            TTCTGGCTCTGGCGC  56 265
LOY33_RS19010 4215043 .. 4215062 + -12.8  -5.28176   TCTGAGACGCAAGAA            GCCCTGCC GATT GGCGGGGC             TTTTTTATGCCTGAA 100 47
LOY33_RS19015 NONE
LOY33_RS19020 4217278 .. 4217294 + -12.3  -5.60993   TGTTGCATGAAAAAA              CCGCCTT CCA AAGGCGG              TTTTTTTATGCCCGC 100 45
LOY33_RS19030 4218787 .. 4218812 +  -8.1    -3.524   CCAGCTCGCGAAACA         GCGGCGTGGCG TCGT CGCCGCGCACC          TTCTGTGGCTCGGTC  60 197
LOY33_RS19105 NONE
LOY33_RS19110 4233632 .. 4233653 +  -7.9  -3.53091   GTGTTCGCCGGCAAG           GTCGACTCC TGCT GGAGCCGGC            TTTGCAGGCCACGCT  62 53
        purM NONE
        purN NONE
LOY33_RS19155 4241336 .. 4241362 + -14.5  -4.85599   CTAGCGTGCATTACC         CGAAACCCCGC CTTGT GCGGGGTTTTG         TTTTTGTGGCGTGGC 100 48
LOY33_RS19160 4241742 .. 4241757 + -11.8  -4.04318   TTCAGAAACAGCAAA              CCCCGC CGAG GCGGGG               TTTGTCGTGTCTAGC  86 50
LOY33_RS19200 4253082 .. 4253105 + -14.6  -3.35813   CAGAGCGCCTGATCT          CTGGCAAGGC CCGG GCCTTGCCGG           TTGGTTACACTGACG  87 29
LOY33_RS19205 NONE
LOY33_RS19210 NONE
LOY33_RS19215 4255264 .. 4255282 +  -5.9  -4.63527   CACGGTGAAGTCGAT             GCCCAGC GCCTG GCTGGCC             TTTTTCAGCTCATCG  78 284
        arsC NONE
        wrbA NONE
LOY33_RS19235 4257087 .. 4257097 +  -6.8  -3.39595   CTTGACCCGCGATTG                 CGAC ACC GTCG                 TTCTCAATGGTTGAC  58 109
LOY33_RS19250 4259500 .. 4259523 + -14.6  -2.62184   TAGGGGCTGTACCCA          TCAGGCCGCC GCAA GGCGGCTTGA           TGCTGTGCGGACCAG  78 55
LOY33_RS19255 4260168 .. 4260185 + -11.3  -4.81851   CAGGCACAAAAAAAA             GCCCATC CGAA GATGGGC              TTTTTGCGTTTGGCT  95 100
LOY33_RS19280 4265508 .. 4265551 +  -9.4  -3.14211   CCCGCCTGGCGGCAA CGCTGGCTCCTGC-GGCAGGC CGC GTGAACCTGCAGGCGCCAGCG TTGCTGGCGAAGGCT  64 43
LOY33_RS19285 4266514 .. 4266530 +  -3.6  -3.14931   ACCGCCGCCGGCACG              CTGCCC AGCAC GGCCAG              TTGATCGACGATGGC  45 246
LOY33_RS19305 4272788 .. 4272801 +  -8.1  -2.53263   TAAGGCCTGAAGGCG               CCGCT TGCA AGCGG                TGCCTTGCGCCTACC  53 38
LOY33_RS19310 4274301 .. 4274318 + -10.5  -5.28176   GATGCTGCAAAAAGA             GGCTGCC GCAA GGCGGCC              TTTTTTGTGCCTGGC 100 54
LOY33_RS19345 4282033 .. 4282062 +  -5.6  -2.77701   GACGCACCTTAACGC       TGCCC-GGTGGCC AACAC GGCTGCCTGGGCC       TGCTGTTGCTCCAGT  47 29
LOY33_RS19355 4284779 .. 4284794 +  -8.2  -2.87132   ATTGGCACGCGGGGC              GGGTCG TCTG CGGCCC               TCTCTGACGGAGAAG  56 480
LOY33_RS19365 4286378 .. 4286398 +  -2.3  -3.52896   TGTCGGTACTCGAAC            CCCGGGCAG CGC CCCCCCAGG            TTCTGTACGTAGTGG  48 277
LOY33_RS19375 4288095 .. 4288126 +  -7.2   -3.0263   CAGGGCATGCAGGCC      GCGCAAGGCGATCAG GGC CTGGTCGCCG-GCAC      TGTTCCAGAAATACT  51 264
LOY33_RS19415 4293654 .. 4293674 +  -2.4  -3.79747   TGGCGGTGAGCACCA            CCCGGTCG ACCTC CTGCTGGG            TTTCCTCGTCGCTGA  54 475
        rapA 4296989 .. 4297012 +  -4.6  -3.16785   ATACAAGTCAATCTG          CCATTAATCC CGAT GGGTTAATGC           TCTCTTCCTATACTC  47 142
LOY33_RS19430 4299772 .. 4299801 +  -3.5  -3.55444   CATCCAGCCAGTGCA       T-GCCGCAGGCCTG CCT CAGCTGTGCGGCCA       TTTGCCGCGTGGCGC  51 458
LOY33_RS19440 4302850 .. 4302866 +  -4.3  -4.11484   CATTTCGCCATTTTT              CCACGGT TTC ACTGCGG              TTTTCGGCCATTGCC  62 364
LOY33_RS19450 4304518 .. 4304539 + -12.3  -4.65263   ACTCCATGACTACAA           GCCCACTGT GCGA GCAGTGGGC            TTTGTTTTACGAGGT 100 48
        livH NONE
LOY33_RS19460 NONE
        livG NONE
LOY33_RS19470 4308386 .. 4308414 + -20.3  -3.35679   CCCCTTCGCCGGCAA        CGCCGGCTCCTAC AGT GCAGGAGCCGGCG        TTGTCGGTGAAGGGG 100 50
LOY33_RS19480 4310042 .. 4310052 +  -2.4  -3.50853   GCAGACCTATCACGT                 GGGC TAG GGCC                 TTGTGATTGCGCCCC  47 19
LOY33_RS19485 4310793 .. 4310836 +  -4.4  -3.51597   CTCGCGCAACGACTG ACCGGCCGCACGCGTTTAAG CTGC CTTAAGCGCCTGCGAACAGC TTATACTTGGCGGTT  53 25
LOY33_RS19490 4312650 .. 4312687 +  -6.4  -3.12351   TATCCCCACAGGGTA   GGGTGTTCCTCT-TC GAATTTCAG GATGGAGGAGCACCC   TTGCCTCTACGCAGC  52 157
        nhaA 4313891 .. 4313916 + -16.9  -4.86731   ACCGGCAATGAAAAA         CCCCGAC-CGGC GGT GCCGAGTCGGGG         TTTTGTTTGCACGCC 100 47
LOY33_RS19505 4315192 .. 4315203 +  -2.2  -3.85704   TGGCGCGCAGGTGAT                G-GCC CTT GGCAC                TTTCGTAGTTGGTGA  54 408
LOY33_RS19535 4322887 .. 4322929 + -16.8  -3.05844   GCTGAAGTATCAGCT CCCCGTCAGCCCCGGCCGCC CCC GGTTGCCCGGGCTGCCCGGG TCTTCCCGTCGCCCC  89 136
LOY33_RS19560 NONE
LOY33_RS19565 NONE
LOY33_RS19570 NONE
LOY33_RS19575 4327608 .. 4327628 +  -4.6  -3.05844   TCGACCACGACACCG            CCGACGGC CAGCC GCTGTCGC            TGTTCGAGTCCGGGG  47 305
LOY33_RS19585 4330630 .. 4330660 +   -11  -2.57132   CGGCAAGTAACCCCT       TCGGCTCGCCGTCG CCC TGGCGGCGAGCCCC       CTTCTCACCCCGCGC  66 31
LOY33_RS19590 4332844 .. 4332870 + -20.9  -3.60475   AGCAGCCCCCCTGCA         GCGTCGCCGGC AGCAC GCCGGCGACGC         TTTCGGATCGAACTT 100 41
LOY33_RS19595 NONE
LOY33_RS19600 NONE
LOY33_RS19605 NONE
LOY33_RS19610 NONE
LOY33_RS19615 NONE
LOY33_RS19620 NONE
LOY33_RS19625 NONE
LOY33_RS19630 NONE
        pdeM 4343551 .. 4343577 +  -9.5  -3.01712   ACTCCAGGAACAGCA        TCTGCGCC-ACG CCTT CGTTGGCGTAGA         TCTTGGCCGGCAGGG  57 454
LOY33_RS19650 4344604 .. 4344625 + -10.8  -5.86332   CACTGCTTGAAAAAA           GCCCTGCC CTCACC GGCGGGGC            TTTTTTTTGCCTTGC 100 50
        metG 4348052 .. 4348077 + -13.2  -3.51032   ATCAAGTAAGTGCCA         CGCCCCGACC CTGACC GGCCGGGGCG          TTCTAATTGCACCGT  81 32
LOY33_RS19665 4348854 .. 4348883 + -10.7  -2.73681   GCAGCGAGACCATTG       CC-GCACTGGCAGC ACT GCTGCAGGTGCCGG       TGATTGCCCTGGATA  63 167
LOY33_RS19675 NONE
LOY33_RS19680 NONE
LOY33_RS19685 NONE
         nth NONE
LOY33_RS19695 4352577 .. 4352604 +    -4  -2.87931   GACTTCGATCTTTGA        CGGCCCACTT CAGGTCGC GGGCGGGCCG         TCTCTAGCGCATGCA  44 26
LOY33_RS19705 4354287 .. 4354303 + -15.1  -3.61468   GAAGGCATAAAAAAA              CCCGGCC TCA GGCCGGG              TTCCTTTCGTTCAAG  88 42
        pyrC 4357867 .. 4357888 +  -2.1  -3.55761   TCAAGGCGGCGGTTC           GCGC-CATCC GAT GGCAGAGCGC           TTTCGCGGCTACCTG  47 69
         rnt 4358564 .. 4358580 + -10.8   -5.1675   ACAGGCATAAAAAAA              CCGGCC ACCAG GGCCGG              TTTTTTCATGCGTGG 100 101
LOY33_RS19735 4359676 .. 4359692 +  -9.4  -5.64274   AGCGAATTTGAAGAA              CCGGAC CTCGT GTCCGG              TTTTTTTATGCCTGC 100 45
         bfr 4360354 .. 4360371 + -14.1  -5.44119   CCGGCTGTAACCAAA             GCCCCGC CTGT GCGGGGC              TTTTTTTCGCCTGGG 100 51
        argF NONE
LOY33_RS19760 4365440 .. 4365485 +  -9.1  -3.14132   ACGCTTCGCCAGCAA GGCTGGCTCCTACAGGA AATTGCCTGGCC TACTGTAGGAACCAGCC TTGCTGGCGAAAAGG  60 43
LOY33_RS19775 NONE
        glpK 4369595 .. 4369623 + -13.1  -3.14132   CTTCTTCGCCAGCAA        GGCTGACTCCTAC ACT GTAGGCGCCAGCC        TTGCTGGCGAGGCGC  76 53
LOY33_RS19785 4370577 .. 4370588 +  -5.8  -4.65916   TCTATTGAAAGCGAC                TGGC GGGC GCCA                 TTTTGTTGCGCTACC  75 117
        glpD 4372224 .. 4372260 + -10.9  -3.53444   GCATCGCGGGTCAAG   CCTGCTCCCACAAGGT CACCAA ACCA-GTGGGAGCGGG    TTTGACCCGCGATGA  74 53
LOY33_RS19795 4373460 .. 4373474 +  -2.8  -3.72576   TCCTGACCCCCAGCT               AGTTAG TGT CTAACC               TTTCATCCGAGGGCG  52 35
LOY33_RS19800 NONE
LOY33_RS19805 NONE
LOY33_RS19810 4375748 .. 4375760 +  -3.3  -2.79796   CAGAGGGCGCTGGTC                GTGAC AAG GCCAC                TGTGATGAAATGCGA  41 75
LOY33_RS19815 NONE
LOY33_RS19820 NONE
LOY33_RS19825 4379344 .. 4379363 + -11.4  -3.04144   TGCGCCTGCACTAGC            GTTGGGCC AGAT GGCCCAGC             TCTTCGCGGTGCGCC  69 27
        metR NONE
LOY33_RS19850 4386991 .. 4387019 +  -7.4  -3.17319   GGTGTGTGCAGGAGC       CGGCATTGCCGGC GAAG GCCG-CAACGCTG        TCTTGATGGGTTCAC  56 55
LOY33_RS19855 4388778 .. 4388795 + -14.1  -3.51924   ACAGCCACACAAAAA             CCCCGGC CTGG GCCGGGG              TTGTGTACATCAGGA  88 95
LOY33_RS19865 NONE
LOY33_RS19870 NONE
LOY33_RS19875 4395805 .. 4395819 +  -5.6  -3.13403   CCGCCTGGGTCAGCA               CCGTGG CCA CCAGGG               TATTGCTCAACACCG  49 515
LOY33_RS19890 4398504 .. 4398514 +  -4.6  -5.40072   GCAACGGTCACTCTT                 GCTG ATC CGGC                 TTTTTTTCCGGCACG  90 73
LOY33_RS19895 4400008 .. 4400029 +  -3.5  -3.11936   TCCAGAGCAGCTTCT           GAACGGGCC CTGC GGCTCGAAC            CTTTTCACCTTGATG  43 24
LOY33_RS19900 4402508 .. 4402557 + -31.5  -3.35679   GCCCTTCGCCGGCAA GGCCGGCGCCTGCAGGACCATGT GACA GCATGGCCCGGCAGGCGCCGGCC TTGTCGCTGAAGGGG 100 69
         lon NONE
LOY33_RS19910 4405620 .. 4405633 +  -2.3  -3.73072   CAGGTACGCTGAGGC               TGCGC CCCG GAGCA                TTTACTCAAGGCGTT  51 29
        cmoA NONE
        cmoB 4410917 .. 4410963 + -10.9  -2.79023   GCTCGGCGCCGCCTT CG-GC-CATTGCCGCGCTGCTGC CCA GCAGCAACGCGGCGATCAGTGCG TACTTGCTCAGGTTC  60 228
LOY33_RS19960 NONE
LOY33_RS19965 4419222 .. 4419268 + -13.4  -3.02144   CGGCATTCACGATCA GCCCCTGGGCCAGGCCGAAGGC CAC GCCATCGGCCACGCGCTGGAGC TCTTCGGCCACCTCG  70 284
LOY33_RS20005 4426533 .. 4426554 + -17.3  -5.06414   CGCGCCCATGAAAAA           GCCCGACGC ATCG GCGTCGGGC            TTTTTCTTACCGCGA 100 44
        nadB NONE
LOY33_RS20045 NONE
LOY33_RS20050 4435400 .. 4435410 +  -5.4  -3.33815   GCGTTGTCCACCAGG                 TTGC TCA GCAA                 TTCGTTGAGCAGCGT  51 306
LOY33_RS20065 4438634 .. 4438650 +  -4.3  -3.78775   AGTGCGGCTGCTGGT              GAGCTAC AGC GTGGCGC              TTTGGTAATCCGCCC  54 1
LOY33_RS20070 4439760 .. 4439779 +  -4.8  -3.66178   CATTCGCCGGCAAGG            CCGGCTCC TACG GGTGCAGG             TTTGCCCTTCGAGGA  56 111
LOY33_RS20075 NONE
LOY33_RS20080 4441755 .. 4441769 +  -2.1  -2.91383   CCGCAGCGCCCAGCG              TCGTGC CCTG GC-CGA               TGTCTGAATCCACCT  40 4
LOY33_RS20085 4442818 .. 4442843 + -14.9   -4.4891   CAACCCCTGAAACGA         GAAAAGGAAGC CGAG GCTTCCTTTTC          TTTTCTACTGCTCGC 100 31
LOY33_RS20110 4452115 .. 4452140 +  -4.6  -3.15544   TGCACATCCCAGCGG         CGCTGGTCGG CGTCGA TCGGCAAGCG          TTCATCGACATAGGC  47 496
LOY33_RS20120 NONE
LOY33_RS20125 NONE
LOY33_RS20130 4454786 .. 4454798 +  -4.7  -3.05596   GGCACTTGCGGGTTG                GCCGG GCG CCTGC                TTGAATCCAACCGTC  47 82
LOY33_RS20135 4456045 .. 4456056 +  -3.6  -2.87468   CTGGTACAAAGTGCG                CCTG AAAG CGGG                 TGTCGTATAATGGCA  44 136
LOY33_RS20140 NONE
LOY33_RS20145 4457123 .. 4457138 +  -3.2  -4.04206   TGCTCCGAAACATCA              CAAGGA TCGG TCCATG               TTTCTCTCCCGCTGG  58 149
LOY33_RS20150 4459060 .. 4459074 +  -2.8   -3.2614   TTGGCCTGCAGCACG               TCGC GCAACTG GCGA               TTGGTGTCGAGAATC  46 246
LOY33_RS20175 4465842 .. 4465873 +  -2.3  -2.87132   CCACCTGTGGCTCAA      TGAGCGGCCCCT CCAGCCCTC AGGCG-CGCTCA      TGTCTACCCGCGAAA  40 158
LOY33_RS20180 4466981 .. 4466993 +  -4.1   -4.0156   GCGCCGCCGGGTGGC                CAGGA TCA TCTTG                TTCTTGTTGGTGTGC  59 246
        bglX 4472655 .. 4472686 +  -4.5  -2.73483   GACGTTCACGGGGAA      GTG-CCTGGCAG CCTTCCCCC CTGCCAGGGTAC      TGCTTGCCATGCCGT  44 49
LOY33_RS20210 4474442 .. 4474458 +  -4.4  -2.86271   CCTGCGACCCGGAGC              CTGCAT GCTGA ATGCGG              TGATTGTCGTCGACG  44 15
LOY33_RS20215 4475871 .. 4475912 +  -7.9  -3.53012   TCTAAACCGGGCCTT CGCTGGCTGGCACGGGTCCT GCT ATGGCCC-TGTCAGGCCGCG TTTACACGCGCACCA  62 107
LOY33_RS20220 4477291 .. 4477314 + -18.2  -5.27923   TGCTGCAATAGACAA          GGGGCCTCCA GCGA TGGAGGCCCC           TTTTTTGTGGGCTTA 100 47
LOY33_RS20225 4477818 .. 4477835 + -14.1  -3.37533   CGATGCAGCGCCACA             GCCCGGC TTCG GCCGGGC              TTAGTCATTTTCAGG  87 45
LOY33_RS20230 4478711 .. 4478725 +  -2.8  -3.66874   CGCCGAAACAGCCTC               GAATAC GTC GAATTC               TTTACGTGCCATTGC  53 230
LOY33_RS20245 4480209 .. 4480222 +  -2.3  -3.53012   GCAAGGTTGCGTAGC               GCGCT CTAG ATCGC                TTTCGCCGGCAAGGC  47 17
LOY33_RS20260 4484348 .. 4484405 + -40.9  -3.91858   GGGCACCGCGTTGAT GCAGTCGCCGGCAAGGCCGGCTCCTAT ACCT GTAGGAGCCGGCCTTGCCGGCGAATGC TTTCTAGGCTCTGTA 100 27
LOY33_RS20275 4487125 .. 4487138 +  -5.3   -2.9914   CGCAATGCTGGCCTA               TGCTT GTAG AAGCA                TCTGTGTGCGGGATA  48 56
LOY33_RS20280 4487441 .. 4487452 +  -2.2  -3.21416   GCAAAACCCAGGCTG                TCAG CCAA CTGG                 TTGATCGTGAGGCTG  42 124
        pobA NONE
LOY33_RS20295 4491119 .. 4491140 +  -4.3  -2.72344   GACCGCAATGCCGAC           CACGCCGTA GGCG TCCGGGGTG            TGATTGAAAATGAGG  43 89
LOY33_RS20310 NONE
        ttgB NONE
LOY33_RS20320 4498771 .. 4498790 + -10.7  -5.28176   CGTGGCGACACAACA            GCCCACC CTTCGC GGTGGGC             TTTTTTGTGCCTGCA 100 49
LOY33_RS20325 4500579 .. 4500595 +  -3.5  -3.30124   TGCGCTTCACGAAAT              GCCCCAG CAG CAGGTGC              TTCTCACCGCTCACC  47 403
LOY33_RS20335 4502754 .. 4502793 +  -7.6  -3.18681   GGTGGCGTCGATCTG  CCTGGCCGCCAGGGCGGC GATA GCCGCGCTGAAATCCAGG   TTGATGACCTTGAGG  54 453
LOY33_RS20345 NONE
LOY33_RS20350 NONE
LOY33_RS20355 4507857 .. 4507888 +  -3.6  -3.37796   CACTCATCAGGCTCT      GCTGCTCCAGCGC GACAAAG GC-CAGGCGCAGC      TTGTGGCTCATCAGC  49 266
LOY33_RS20365 4508913 .. 4508955 +  -9.1  -3.14132   CCCATTCGCCGGCAA GGCCGGCTCCTACAACG GCACGCACA CACTGTAGGAGCCAGCC TTGCTGGCGAAGAGG  60 44
LOY33_RS20415 4519403 .. 4519419 +  -3.7  -3.41693   CATAATCGCGCCCCC              TTATGAC CGG GTCAGAA              TTCCTTCATGATCGA  49 329
LOY33_RS20420 4520920 .. 4520945 + -12.6  -5.14965   CGCTGTACCGCAGAA         GGGTCAGCCA TTCATT TGGCTGGCCC          TTTTTTCATGGCCCT 100 46
LOY33_RS20425 4522333 .. 4522348 +  -4.6  -3.72576   TGCAAGAACTCCCCG              GCCTTG TCGG CCAGGC               TTTCCTCGGCCGGCG  55 126
LOY33_RS20435 4525724 .. 4525737 +  -4.5  -3.14132   TCCGCATCTGACCGC               GCGCGC CCG GCG-GC               TTGCTCGCCGGGCGC  47 30
LOY33_RS20440 NONE
LOY33_RS20445 NONE
LOY33_RS20450 4528835 .. 4528863 +  -8.7  -3.31144   CGCGGTCTTCCAGGT        GATAGCGCAGGCC GCG GGCCAGCACCATC        TTCTCGACGTCGCGA  58 126
LOY33_RS20460 4530351 .. 4530366 + -10.4   -5.4833   CAGGTCAGCCCAAAA              CGCCAG CATG CTGGCG               TTTTTTATTGCCTGC 100 65
         pyk 4534439 .. 4534459 + -15.4  -5.28176   CCGGTTGTCACTAGA            GCCCCGCC TTGAT GGCGGGGC            TTTTTTATGGGTGCG 100 47
LOY33_RS20495 4538876 .. 4538901 + -19.1  -5.49234   AGCTGAAAGCTGAAA         GCGGCAAGGGA GTGA TCCCTTGCCGC          TTTTTTGTTGCCTGT 100 55
LOY33_RS20520 4543166 .. 4543185 +    -7  -2.78463   GTGCCCACGCTACGC            CCGCCACT TCAA GGCGGCGG             TGTGATGCAACGCCT  51 1
LOY33_RS20525 NONE
LOY33_RS20535 NONE
LOY33_RS20540 NONE
LOY33_RS20545 4547371 .. 4547384 +  -4.5  -3.31461   AGGGCTTGGCGTTGA               TCTGC CGTT GCAGG                TTCTGCACCTGGCTC  49 152
LOY33_RS20565 4550867 .. 4550878 +  -3.6  -3.17763   CGTTGCAACTGGCGC                TGGG CTGA CCCG                 TTCGTCAGGTGTCGG  47 18
LOY33_RS20570 4551676 .. 4551691 + -11.8  -5.60993   CTGCTTCTGAAAAAA              CCCGGC TCAG GCCGGG               TTTTTTTATGCCGAA 100 44
LOY33_RS20575 4554101 .. 4554118 +  -6.9  -3.05343   ATTATGTTGCACCTT             TGCGTGC GGCT GCACGCC              TGTTCAACCTCTCGA  54 123
LOY33_RS20580 4555501 .. 4555518 + -10.5  -5.24531   GCGTGCTGAAACAGA             GGCGGCC TTCG GGTCGCC              TTTTTTGTGGGACCT 100 47
LOY33_RS20585 NONE
LOY33_RS20590 NONE
LOY33_RS20595 NONE
LOY33_RS20600 4560579 .. 4560599 +  -2.4  -3.53761   AGCCCGGCGCCGACT            GACCAAGG AACCG CCATGGCC            TTTACCGACCCGTTC  47 24
LOY33_RS20605 4564085 .. 4564097 +  -4.7  -3.31144   ACGCTGGCAGCTGAT                GCGCC GGC GGCAC                TTCTCCAGGTCCAGC  49 469
LOY33_RS20635 4568398 .. 4568416 + -13.1  -3.38812   GCCAGACATAAAAAA             GCCCCGC ACAAG GCGGGGC             TCTTCTTCAAGCGGG  79 69
LOY33_RS20665 NONE
LOY33_RS20670 4575537 .. 4575547 +  -2.4  -3.22223   GCAGGCTGTAGCGCT                 CGGC AAT GCGG                 TTGATGATCAGGTTG  44 411
LOY33_RS20690 NONE
LOY33_RS20695 NONE
LOY33_RS20700 4581774 .. 4581789 +  -6.8  -3.05816   CGTCTGTAGGAGCCG              GCCTTG CCGG CGAGGC               TTCACTCAGGCCTCA  54 83
LOY33_RS20725 4588607 .. 4588632 +  -9.7  -4.09685   CGTCTTCGTTGAGCA         CGCCATCCTTG TCCA CGACGATGGCG          TTTTCCACGCTGCCG  75 373
LOY33_RS20820 NONE
LOY33_RS20825 NONE
LOY33_RS20830 NONE
LOY33_RS20835 NONE
LOY33_RS20840 4611754 .. 4611773 + -10.7  -5.37593   CAGGCCCAAAAAAAA            GGCGACC CCGCAA GGTCGCC             TTTTTTCATTTCACC 100 46
LOY33_RS20880 4618110 .. 4618126 +  -2.1  -3.05844   GCGGCGCGTCAGCAT              CCTGGCC ATC GACAAGG              TATTCGCATCAACCC  41 183
LOY33_RS20885 4619131 .. 4619148 +  -6.9  -2.77501   GGGAGCGGGCTGAGC             CGCGACA GCAG TGACGCG              ATTTAAGGCTTGTGT  51 92
LOY33_RS20905 4622998 .. 4623016 + -13.1  -5.15634   GATACAAAGAAAAAA             GGGGCCG ATCGC CGGCCCC             TTTTTTCATCCCCTC 100 118
LOY33_RS20920 4627653 .. 4627680 + -18.5   -4.4078   AGCCGCCACAAAAAA        GCCCGCGATGG CCTTCA CCATCGCGGGC         TTTTCATTCAGCAGC 100 133
LOY33_RS20940 4632830 .. 4632880 +  -8.1  -2.70932   GGAAGAGGACTGACC CCTGGC-CGCGCCGGCCTGACGCCG CAT CGGCG-CAGCACTGCGTGCGGCGGG TGATTGGCACAACCG  54 28
LOY33_RS20945 NONE
        rhlB 4635233 .. 4635252 + -10.7  -6.09133   TTGATGGACAGAAAA            CGCAGCC CTCGCC GGCTGCG             TTTTTTTTTGCGCTG 100 46
LOY33_RS20955 4636345 .. 4636365 +    -6  -3.53444   GCCCTGTACCGCCTG            CACGGGTG ACGCC CGCCCGCG            TTTGCGGCACACTCC  58 17
LOY33_RS20960 4637280 .. 4637298 +  -8.8  -3.01924   GTAACTCTGGCCCTT             GGGCGTCT CCA AGAAGCCC             TGTTCAAGCGGGATG  55 252
        yaaA 4643080 .. 4643122 + -12.6  -3.06183   AGCATTGCGGGTCAC GCCCGCTCCCACCGGGAT CACCTGA ATCCTTGCGGGCGCGGGC TTGACTCGCGATGGC  76 43
LOY33_RS21000 4645186 .. 4645214 + -16.7  -3.37879   TGGTAACAGCAGCCA        CTGCACGGGGTCG CCC CAGCCCCGTGCAG        TTCCTTCCCATTCAT  90 35
        alg8 NONE
LOY33_RS21010 4647917 .. 4647927 +  -2.4  -3.53224   GATCGACAAGGCCGT                 GGCC CGT GGGC                 TTTGAAGAGGACATG  47 10
        algK NONE
LOY33_RS21020 NONE
        algG NONE
LOY33_RS21030 NONE
LOY33_RS21035 4655107 .. 4655129 +  -9.8  -3.54741   TGCTTTTGATCTGGT           TCCCCCGC AATTTCA GCGGGGGG           TTTGGGGGGCTGCTG  69 81
LOY33_RS21040 NONE
LOY33_RS21045 NONE
LOY33_RS21050 NONE
LOY33_RS21055 4660025 .. 4660041 +    -5  -2.50077   CATCGAACCTGTGGG              AGCGGG CTTGA CCCGCG              ATGCTTTTATCAGGG  43 94
LOY33_RS21060 4660535 .. 4660559 +  -2.7  -4.62471   TTCGTGCCGAGCACC          TGCAGGGTGGC TTT GCCAACTAGTA          TTTTTGCCAGTTACC  66 3
LOY33_RS21065 NONE
LOY33_RS21070 4662013 .. 4662030 +  -6.9  -3.86897   CCAAGGTCGGAGCAC             CGCTGCC TGCT GGCAGCC              TTTCTCACAAATGCA  66 210
LOY33_RS21075 4663123 .. 4663168 +  -3.2  -3.14344   GGCGCGGCTGCGCCC GGCG-CCCAGGTCGGCCACC ATGTCCTC GGTGGCC-ACCAGCATCGCC TTGATACGCGGGCTG  44 410
LOY33_RS21090 NONE
LOY33_RS21095 4666579 .. 4666600 +  -2.1  -2.52516   GGCATGGCAGCGCGA           GCGTGGGCG CCCT TGACCACCC            CTTCCTGGTAGAGAA  38 93
        paaF NONE
LOY33_RS21105 4669813 .. 4669851 +  -6.8   -3.0263   GCAGGGCTGCGCCGG  TGGTGGCGCTGGCCTGGC GCGAG GCCAGG-TAGA-CCACCA  TGTTGGCGACCTCCT  51 121
LOY33_RS21135 NONE
LOY33_RS21140 4677767 .. 4677821 + -11.2  -3.17212   GAGGTCCAGCTCTGC CGCCGCCAGCTGCGCCTGGGCCTGCT GGT AGTCGGCCAGGGCCGAGTTGGCGATG TTGCTGGCGTCGTCG  64 481
LOY33_RS21165 NONE
LOY33_RS21170 4684690 .. 4684704 +  -8.5   -3.4072   GCATTGGTGGTCATC               GGCCG CAAGC CGGCC               TTCTGCTGCAGGCTC  60 445
LOY33_RS21180 4686262 .. 4686285 +  -9.5   -3.7918   CCCGCTCCCACAGGG          CCCCCACCG CCCTCA CGGTGGGTG           TTCTTCCTGTGCTCT  75 53
LOY33_RS21215 NONE
LOY33_RS21220 NONE
LOY33_RS21225 4696592 .. 4696606 +  -2.1  -3.97947   ACGGACGGTCTATCT              GCAGAC ATCG GTC-GC               TTTCTGATCGGTAGC  56 4
LOY33_RS21230 4697296 .. 4697313 + -12.7   -5.4505   AAGGCAATGAAAGAA             GGCGAGC CACG GCTCGCC              TTTTTTATTGACCAC 100 46
LOY33_RS21235 4697856 .. 4697872 +  -9.3  -3.40403   CGCACACATACAGCA              GGCCCAC GTC GGGGGCC              TTGTGGTGCGACACA  63 161
LOY33_RS21245 4698914 .. 4698938 +  -7.8  -3.58343   GAATTGATGATGTAG          TCCGGGGCAT ACAGA ATGCCGCGGG          TTTCGAGCTGGTCGG  60 222
LOY33_RS21255 4700983 .. 4701000 +  -4.8  -2.82516   TGATCCAGTGGCCGA             TCCAGG CGTTCA CCTGGG              TGTCGTCATGCCCCA  44 342
LOY33_RS21275 4705127 .. 4705148 + -17.3  -5.73978   ATCTACGTCTTGCTT           GGCCGCTGC TTTT GCAGCGGCC            TTTTTTATTTGTGCT 100 275
LOY33_RS21300 4709414 .. 4709437 +  -2.3  -3.14132   GACGGTTTCACTGGC          GTCCAGACG CAGCAT CGGCTGCAC           TTCGTCGAGGCCCAG  42 101
LOY33_RS21310 NONE
LOY33_RS21315 4711087 .. 4711097 +  -8.2  -2.71712   GCATCCGGATTAACA                 CCGC AGC GCGG                 CTTTCGCCGGCAAGG  54 28
LOY33_RS21325 4712961 .. 4712984 +    -3  -2.91681   GGCGGCGAGTTCGGG          TATGCTGGGG CCTA CCCAAGCGAA           TATCTGAAGTTGACC  42 64
        folM NONE
LOY33_RS21335 NONE
LOY33_RS21340 4714386 .. 4714401 + -11.8   -5.1675   ACCGCTGCACAAGAA              CGGCCC ACCT GGGCCG               TTTTTTCATGCCTGG 100 47
LOY33_RS21360 4717140 .. 4717166 + -14.4  -2.71924   TAGTATGGAAGCTGT         TCCCGCTGCAGC CCT GTTGCAGCGGGC         CTTTGACAAGGACTC  80 85
LOY33_RS21365 4718004 .. 4718034 +  -8.9  -3.91911   CGTCAGATCGACGCC       TGGCGCATGCGAT CGGAC AACGCCTGCGCCG       TTTCCTTGCGCTCGG  72 66
LOY33_RS21420 4726480 .. 4726498 +    -6  -4.08042   AGTCTTTAGAGTTAG             CCACTG ATCGATG CAGTGG             TGTTTTTGTGATACG  66 32
LOY33_RS21590 NONE
LOY33_RS21595 NONE
        coaE NONE
        yacG 4757161 .. 4757199 + -13.1  -3.53811   CGCGCGGTTCGTCGT   CCTTCCACGGGGCCTGC AGGTA GCGGGTCCGGTTGAAGG   TTTCCAGCCACTCGG  81 42
LOY33_RS21615 NONE
LOY33_RS21620 NONE
LOY33_RS21625 4760511 .. 4760532 + -14.5  -4.84359   TGCGCAAACGAAAAA           GGGCACCTT TTGC AAGGTGCCC            TTTTTCTGAAGATGG 100 219
LOY33_RS21665 4766853 .. 4766872 +   -15   -5.4505   ACGGTGAATGAAAAA            GGGAGGCC TGAT GGCCTCCC             TTTTTTGTTGCCAGG 100 49
LOY33_RS21670 4767475 .. 4767497 +  -4.1  -3.27951   CGAGGCCTTCAGGCT          CGCCAGCGCCG CTT CGGTG--GGCG          TCTTGTCATAGCCTG  47 336
LOY33_RS21700 4771240 .. 4771253 +  -5.2  -3.36327   CAGCCAGTTGCTTGA               CCGC ATCCTG GCGG                TTCTGGGTGGCGTAG  53 340
        rpsT 4778798 .. 4778813 + -10.4   -5.4833   ACGCTTGTTAAAAAA              CCGACC CTAG GGTCGG               TTTTTTATTGCCTGC 100 44
LOY33_RS21825 4799796 .. 4799822 +  -9.5  -2.98823   CTTTAAAACGGCGAG         GGCGTGAAG CAGTCCACA CTTCACGCC         TCTATCTCGGGCGCC  62 35
LOY33_RS21830 4800384 .. 4800399 +  -2.4  -3.14931   TCCAGGACCCGTTCA              GCCGTC GCAA GGAGGC               TTGATGAACGATGAA  41 174
LOY33_RS21835 4800815 .. 4800835 + -16.9  -5.81412   CTAATCACGGTTATT            GACCCGGCA CTT TGCCGGGTC            TTTTTTTTGCCTGGG 100 165
LOY33_RS21860 4805003 .. 4805029 +  -8.1  -2.66435   CTCATTACGACGTGA        GCATC-ACCG-GC AAT GCGCGGTCGATGC        TGATCTGCTCGCCGT  53 26
        dksA 4807546 .. 4807566 + -16.1  -4.15066   CTGACCTGAACAGAA            CGGGGCGCT CAA GGCGCCCCG            TTTCATTTATGGCTG 100 37
      gluQRS 4808614 .. 4808638 + -11.5  -2.57344   AACAGCTTGCACAAA          GCCCAACAAAT TCA ATTCGTTGGGC          ATTCTGGCGAAGGTC  66 151
LOY33_RS21885 NONE
LOY33_RS21890 NONE
LOY33_RS21895 4813404 .. 4813430 +  -8.7  -5.60993   ATCACGTAACAGAAA        CCGGGGCATACG GTAA CGAAT-CCCCGG         TTTTTTTATGCCCGC 100 110
LOY33_RS21900 NONE
        folK 4816023 .. 4816033 +  -6.8  -2.64099   TAAGGCGTATATAGG                 CCTG GAA CAGG                 GTTGTACTCCAAACA  50 163
        panB NONE
        panC NONE
         pgi NONE
         acs NONE
LOY33_RS21930 4822509 .. 4822548 +  -8.4  -2.75074   TGCACCGGGCCAGGC  GGCGAGTGGGCTGCGCCT GAAC AGGTGCAAGGCACCCGCC   TGCTGTTAAACTGCA  58 6
LOY33_RS21935 4823624 .. 4823639 +  -6.8  -2.52464   AAAAAACCGCAGGTG              GTCCGG TATT TCGGAC               TACCTTCGGAACCGA  50 45
LOY33_RS21940 4826694 .. 4826716 + -13.4  -3.66178   AGCGCTCAAAGAAAA           GCCCCGGC TGACTGC GCCGGGGC           TTTAGGGTTGGCCAC  88 77
LOY33_RS21950 4832935 .. 4832956 +  -2.9  -3.68738   CTTGATCGAACCGTC           GTCTTCGAT ATCG ATCGACGCC            TTGGTTTCTTCGCAG  53 431
        yhbY 4848832 .. 4848844 +  -4.7  -3.14344   CTCGTACTCGACTGT                GCCGC TCG GCGTC                TTGATCACCACAGTG  47 501
        recN 4860676 .. 4860693 + -12.7  -3.06796   CCCACAAAGCACGAA             GGCGACC CCAG GGTCGCC              TTCAATGCCGTGCAA  76 86
LOY33_RS22085 4861772 .. 4861789 + -12.7  -4.72272   CGCAGGTAATAAAAA             GCCCGGA TCAT TCCGGGC              TTTTTCATGCGCGGC 100 47
        smpB 4863270 .. 4863294 +  -6.4  -3.48395   ACCCTGTAGGAGCCG         GCCTTGCCGGC GAAA GCCG-CAACGC          TTGTCTAGCGCCCGT  58 96
LOY33_RS22110 4865989 .. 4866031 + -14.6  -3.53224   TGCTGGTTCACTAAA GTGAAAGAGGCCGGGCGCCC CAA GGGCGCCCGGCAGCTGCCCC TTTCAACCGACGCTG  88 27
        lldD 4867225 .. 4867269 +  -8.6  -2.78996   CCCATCACCGCCTGA TTGTC-CGGGGCACGCGGCG CGATAGA CGCCGTG-GCCCCGCGAGGA GTTTGCATGAGCCTG  58 49
LOY33_RS22120 NONE
LOY33_RS22125 4870542 .. 4870563 +  -3.6  -2.80935   GACCGGACCGGTAGT           CGACGTCG CCCGAC CGATGGCG            TATACTCCATCACAT  43 52
        ssrA 4871022 .. 4871037 +    -9  -5.64274   ACTTCAACATCTAAA              GACGTC CACG GACGTC               TTTTTTTGTGCCTGA 100 40
LOY33_RS22135 NONE
LOY33_RS22140 NONE
LOY33_RS22145 NONE
LOY33_RS22150 4873549 .. 4873561 +  -5.5  -2.72344   GTCTTTACGAGCAAG                TGGCG TAC CGCTA                TCATTCGCACTGCGA  47 407
LOY33_RS22210 NONE
LOY33_RS22215 NONE
LOY33_RS22220 NONE
LOY33_RS22225 4897306 .. 4897359 +  -3.8  -2.87211   CCGCTGCATGGAATG CTGTCGACGCG-TGCATCTGCTTGCTG ATA CCGCC-GC-GATGGACCGCGGCGACGG TGTCTGCCGGCACCT  44 65
LOY33_RS22230 NONE
LOY33_RS22235 4899297 .. 4899315 +  -3.7  -4.38712   CAGACGAGGCTCGCT             CGCCAGC CAGCC GCAGGTG             TTTTCTCAGCATGAA  65 87
LOY33_RS22260 4902751 .. 4902764 +  -4.5  -2.70932   GCACGTTCAGTGCCT               CAGCT CATT GGCTG                TGCTTGGAACAGGGG  44 99
LOY33_RS22265 4904284 .. 4904307 + -13.9  -3.59262   CCCCCTGAACGGCCA          GCCATGGGG CACTCA CCCCATGGC           TTTCGGAATCTGCCG  83 41
LOY33_RS22275 NONE
LOY33_RS22280 NONE
LOY33_RS22285 NONE
LOY33_RS22290 4908954 .. 4908971 +  -6.3  -2.57931   CAGGGATGGCCGATA             CAGACGCA GCA TGCG-CTG             GTTGTCCCGCGTCGG  48 257
LOY33_RS22295 4911314 .. 4911358 + -18.6  -3.01924   TTCTGACCTCAACCG CCAGACACGACAAAGCCCGC CAGAA GCGGGCTTTGTCGTGGCGCG TATTCAGGCGCGCTG 100 35
LOY33_RS22315 NONE
LOY33_RS22320 4914657 .. 4914680 +  -3.8  -3.51825   GGTCTGAAAAAACAT          CGAAAACCGG GTTG CCGATTTTCA           TTCTCATTCGGCTAC  51 34
LOY33_RS22325 4917231 .. 4917253 + -13.4  -3.01712   GGCGTTCTGATCGAA           GGCCTGGGTC GAT GATCCGGGCC           TCTTCGCCGGCAAGG  77 31
LOY33_RS22350 NONE
LOY33_RS22355 NONE
LOY33_RS22365 4922869 .. 4922890 +  -2.9  -4.37092   TGCCTGGGCGGGGCC           GTGTCGGGTA GAA TGCCCG-CTC           TTTTATCCCCAGCCT  64 130
LOY33_RS22370 4924356 .. 4924368 +  -6.2  -3.81626   GCTGCCCTTGCCGCT                GCCC TGCTT GGGC                TTCTTCGGTTTCTTC  62 230
LOY33_RS22390 4928039 .. 4928066 +  -9.8  -3.30124   GCGGTAGCGCTTGAG        GGTTTCGGCAAC CTTG GCTGCCGGGACC         TTCTGCAGGCTGCAG  66 40
LOY33_RS22410 NONE
LOY33_RS22415 4932143 .. 4932161 +    -8  -3.53012   AACACCTGCTGGCGG             CCCTGGGC GAT GCGCGGGG             TTTCGGCCAGGCCGA  60 222
LOY33_RS22425 NONE
LOY33_RS22430 4936092 .. 4936106 + -11.4  -2.78384   CGTAGGTCGCCGATG               CCGGGT CGA ACCCGG               TCTGCTGCACCGCCC  62 210
LOY33_RS22440 4937676 .. 4937691 +  -3.2  -2.78715   ACCTGCGTTAGTCAG              CGCTGCG GGC CG-GGCG              TATAATCGCGCGCTT  41 30
LOY33_RS22445 4938407 .. 4938446 +  -3.6  -3.61398   CTTGAGGGTGGCGCG GCCCT-CCCCGTCGCTGA ACTGGG TCAGC-ACGTCGAAGGGC  TTGTTGAACAGGAGC  51 502
LOY33_RS22470 NONE
        thiE NONE
        hemL 4946841 .. 4946854 +  -3.7  -3.07443   GCTTCGCCGGCCAGG               CCGGC CCCT GCAGG                TTGCATGCAATCTCA  45 45
LOY33_RS22485 4947591 .. 4947606 +  -7.6  -3.30124   CTTCGCACCCCTTCC              GTAACG CAGC CGTTAC               TTCTCGGGCATCGGC  59 22
        miaB 4949390 .. 4949424 +  -4.9  -3.32769   GCTGGTGCAATAAGG    GCATGCGCCGGGCC CGACGAGC GGCCCGGCG-ACCC     TTGATCGTTTCAGCG  51 28
LOY33_RS22500 NONE
        ybeY NONE
LOY33_RS22510 NONE
         lnt 4953611 .. 4953624 +  -5.9  -3.30441   GCAACAGCAGCGCGG               CGCTC ATCT GGGCG                TTCTCCCAAGTGGTA  53 267
        leuS NONE
        lptE 4958095 .. 4958114 + -16.4  -3.07534   CCAACTGAGCCTGAA            CGGGGCGC TTCG GCGCCCCG             TCTATCTGTCCTATG  88 33
        holA 4959209 .. 4959266 +    -4  -3.06696   CTTCTGGGGGGGCGC TGCGC--AGCCCATCGCCGGCAATGCCG GCTC TGCCCTTGCCTGCGAGGGGTTCAGCGCC TATATTGCGCCCACA  45 70
        arfA NONE
LOY33_RS22550 4960930 .. 4960959 + -23.7   -5.0133   AGCCATCAACAAAAA       GGCCCCCGTACCA TCGC TGGTACGGGGGCC        TTTTTTCAGCCAGTC 100 108
LOY33_RS22615 NONE
LOY33_RS22620 4974830 .. 4974848 +  -3.1  -3.31792   GCGCCAGTTCACGTC            GG-CCAGC AGCA GTTGGTCC             TTCTGCACCTCGTAG  46 308
LOY33_RS22640 4976869 .. 4976884 +  -6.8  -3.53012   CCGCCCAAGGTGAAA              CAGCTG CCAG CGGCTG               TTTCACCCGCGACAA  60 42
LOY33_RS22645 NONE
LOY33_RS22650 4979686 .. 4979705 +  -5.7  -3.09516   GTGCCAGCACCGCCA            GGC-CTGC CACCA GCAGCGCC            TTCACTCCTCGCCGC  49 382
LOY33_RS22675 4985532 .. 4985558 +    -8  -3.32294   TTCTCTTGCGGCTTG         CAGCTTGAAGCT TGC AGCTTGCAGCTG         TTCTGGCCCCTTTCG  59 104
         eat 4987079 .. 4987118 +  -9.8   -3.1247   GAGGCCTTGCACTGA  CCGCC-CCGCGCCGCAGGC CTG GCCTGCGGCGCCATGGAGA  TTGCGTATGAGCAGT  64 26
LOY33_RS22685 NONE
        eutC 4989379 .. 4989393 +  -4.2  -3.54129   ACTTTTTAGCGGATT               GCGC TTTTTTC GCGC               TTTAGGCAGCATCTG  51 50
LOY33_RS22695 4989995 .. 4990017 +    -9  -2.78384   GCCAGCCTTGCTGGC           GATGGGCTGC ATA GCAGCCCCGC           TGTGCTGGGGCCCAG  58 99
LOY33_RS22700 NONE
LOY33_RS22705 NONE
         ppa 4992310 .. 4992327 + -14.1  -4.70659   TGCGCTTGAGGAAAA             GCCCCGC GATT GCGGGGC              TTTTTGCATCTGCGG 100 45
LOY33_RS22715 4993392 .. 4993408 + -10.8   -4.7497   GACTGTCCCCGAGAA              GCCGGC CACAA GCCGGC              TTTTTAATGCCTGAA  95 225
LOY33_RS22720 NONE
LOY33_RS22725 4996747 .. 4996770 +  -3.8  -3.08679   GCCACCCTCGCCCAA          GCTTTAGAGT AAAT GCTCTAGCGC           TCTTAGCTGAGGCGG  45 109
LOY33_RS22735 NONE
LOY33_RS22740 4998657 .. 4998669 +  -2.6  -4.17316   CCGGATTTCCTAGCC                GCCG CAGAC TGGC                TTCTTTTAGCAGGCT  59 85
LOY33_RS22745 4999973 .. 4999989 + -10.8   -4.7497   GCGAACTGATAAAGC              GCCGGC CACAA GCCGGC              TTTTTAATGCCTAGA  95 102
LOY33_RS22765 5004925 .. 5004965 +  -7.4  -2.98015   AAGCGAAAGCCGCCT AGC-CCGCCCCCTGCACCG CTGC CGGTGCAGGCCTCGGCGCC  TATATGCTAATTAGG  53 24
LOY33_RS22770 5006152 .. 5006168 +  -2.1  -3.31144   CTGCTGCCCAGGTGA              CGGGATG AAC CAGGCCG              TTCTGACCCTGAGCC  44 18
LOY33_RS22775 5006977 .. 5007004 +    -4  -2.77781   ACGCCGCCTCACCGG        GTG-GGCGTCATG AGC CGGGGCGCCACGC        TGAGTTTTCGTGGCC  43 13
LOY33_RS22780 5007759 .. 5007772 +  -3.7  -3.07816   GCATTTCTAGTCGAC               ACGGG ACCT CCCGA                TTAACTGAATGGCAC  45 31
LOY33_RS22785 NONE
LOY33_RS22790 NONE
LOY33_RS22800 5011679 .. 5011704 +  -7.5   -3.4529   CCAGCAGGTTCAGGC         CGCGCCAGCGGT CCG GCCGGTGG-GCG         TTCTGGTCATCCTGT  59 100
LOY33_RS22845 5022002 .. 5022016 +    -7  -3.62046   ACCTCAGGAGGTATG               CCCGCC TTG GGCCGG               TTGTTGACCCAGTGC  60 160
        rtcR 5028682 .. 5028708 +  -5.6  -3.75153   GCCATGCTAGAATCC         GCGCCCCGGCCG TAT TGGCCGGCACAC         TTTCCCTTCCACCGA  58 44
LOY33_RS22880 5029859 .. 5029900 + -11.5  -3.14132   GGCTTTCGCCAGCAA GGCTGGCTCCTGCAGAGTG GGGA TAAACGGCAGGAGTCAGCC  TTGCTGACGAAGAAC  69 50
LOY33_RS22900 NONE
        ispA NONE
         dxs 5037529 .. 5037544 +  -4.6  -4.18494   GGCCGCCGGCTCTTC              AGCGCT GTTC AGCGCC               TTTTCAGTGGCAATC  66 274
LOY33_RS22970 NONE
LOY33_RS22975 NONE
        trxA 5047389 .. 5047408 +  -9.2  -3.01712   GGGAGCGGGCTTGAC            CCGCGATG GGAT CAACGCGG             TGTTCAGCCGACCCA  62 82
LOY33_RS22990 NONE
LOY33_RS22995 5049141 .. 5049163 +  -4.1  -2.65264   TCAACCGCGCCGCGC          GCCCTGCCAG CGAC CTGG-AGGCC           TGATGTACCTGCTCC  42 0
LOY33_RS23000 NONE
LOY33_RS23005 5050957 .. 5050973 +  -3.5  -3.74178   ATGAACTACAATAGA              AGCCCCG CGC CAGGGCG              TTTGCGGTTTCATTG  52 27
LOY33_RS23010 5051760 .. 5051777 + -12.7  -5.82316   TCTGACCATGAAAAA             GCCCCGA TCAT TCGGGGC              TTTTTTTTGGCTGCT 100 36
LOY33_RS23015 5053238 .. 5053255 +  -8.3  -2.57132   CTCGGGCAGGTCGAA             GCGCGCC AGCA GCCGCGC              ATTGTCGGCCCGCGA  52 198
LOY33_RS23030 5056356 .. 5056372 +  -7.3  -3.22298   ATGGTCTGGCTCATC              TCGTTGA CCG TCAGCGA              TTCGTAGTCGATCAG  54 300
LOY33_RS23040 5058559 .. 5058582 +    -3  -3.89822   CCGCCCCGTTCGCGG          GCGGCAGC-CG ATT CGCGATGCCCC          TTTCTCACCTGCCTG  55 55
LOY33_RS23045 5059993 .. 5060005 +  -6.2  -3.67775   TCTTGCGCAGCAGCA                GCCG TACCT CGGC                TTCTTCGCTGCCGGT  59 417
LOY33_RS23085 5069622 .. 5069644 + -19.2   -4.1891   CCCCAGAACGCAAAA           CGCCCGATGC AGT GCATCGGGCG           TTTGTCTTGAAGCGC 100 147
        uvrA 5074614 .. 5074638 + -17.2   -4.8622   GCGGGCACAAAAAAA          GGCCATCGGG TACGC CCCGATGGCC          TTTTTCGTTGCGCGG 100 81
LOY33_RS23385 5119864 .. 5119887 +    -3  -2.99471   CCACCATGCTGGCCT          CGGCCAAGCGC TAA GC-CATGGCCC          TGTATCTGGGAGTGA  42 12
LOY33_RS23390 5121412 .. 5121427 +  -6.8  -3.38291   CTGTTGCCGCCTTAA              TGCGTG ATGA CGCGCA               TTATCCGCTTCTCCG  58 465
        hemJ 5123118 .. 5123128 +  -3.2  -3.44229   TCGTCATCCTGGTCG                 TGGT CAA ACCG                 TTCTGATCCTCCACT  47 9
LOY33_RS23410 NONE
LOY33_RS23415 5124597 .. 5124610 +  -8.1  -3.68529   ATGACTGCCCTCAAC               GGCTG ACCG CAGCC                TTTACCTGCTCCAGT  66 20
LOY33_RS23420 NONE
LOY33_RS23425 NONE
        coq7 NONE
LOY33_RS23435 NONE
LOY33_RS23440 NONE
         crp 5129409 .. 5129427 + -10.2  -3.14211   CCAGGCGCGCCAGCA             GCGGTGCC TGG GGCACCAC             TTCATGCAGGGCGAT  62 81
LOY33_RS23520 5144599 .. 5144622 +  -5.2  -3.05384   TGGCTGAGCCCGCAA          GCGGT-CGACT AGA AGCCGCGCCGC          TTGCGTACCACCGCG  49 14
LOY33_RS23540 NONE
LOY33_RS23545 NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
LOY33_RS23565 NONE
        glpE NONE
LOY33_RS23575 NONE
LOY33_RS23580 NONE
LOY33_RS23585 5159931 .. 5159974 + -16.9  -5.14965   AGCCGCCCGCGCCAA CCTCCGTTGTGGCCAGACAGG GTAT CCTGT--GGCCTCAACGGAGG TTTTTTCATGCAGAT 100 39
LOY33_RS23590 5161694 .. 5161731 + -12.7  -3.14211   GCATCGCAGCCAGCG   CATCGAGCCCG-GCGCCG AGG TGCCGCTCGCGCTCGATG   TTGCTGCCAAGGCCT  69 508
        plsY 5162733 .. 5162750 +  -4.1  -3.87869   TCTACGCGACCTTTT             TGCCG GGCGCGAA CGGCA              TTTCTGAGGCGTTCA  57 1
        rpsU 5164216 .. 5164235 + -10.8  -3.14881   CAGCGCCGCGCCGTT            CGTCTGTA CTGA TACAGACG             TTCGTCGCCAGCTTC  66 14
        dnaG NONE
        rpoD 5168451 .. 5168480 + -14.3  -4.57569   TCCTCGACGAGTAAT       GACGAACCCCGGC AAAT GCCGGGGTTTTTC        TTTTTCAGGCCCTGA 100 27
LOY33_RS23630 NONE
LOY33_RS23635 5172410 .. 5172439 + -12.9  -4.56597   TGTGGGCCCACCAAA       CTC-AAAGCCGCGC ATT GCGCGGCTTTCGTG       TTTTTGGCGGAACCA 100 28
LOY33_RS23665 NONE
LOY33_RS23670 5182276 .. 5182305 + -12.9  -4.57569   TGTGGGCCCACCATA       CTC-AAAGCCGCGC ATT GCGCGGCTTTTGCG       TTTTTGGCGGGATCG 100 247
        panB NONE
LOY33_RS23695 5187352 .. 5187367 +  -4.6  -2.57132   CGAAAATGGGCGGGC              GCCTGC GCTC GCAGAC               CTTCTCCGGCGCCGA  43 518
LOY33_RS23705 5189617 .. 5189645 +  -3.9  -2.78384   ATTTATCCGCTAGCA        TGACGGTTC GCACGTTACCG GAGCCGTCA        TGTCCTGCGCCCACC  43 40
        pqqF 5192010 .. 5192024 +  -2.7  -2.58758   TAATTTTAGTAAGAT               GGCGC TACCC GGGCC               GTTGTAACCCCTTGT  38 54
        pqqA 5192191 .. 5192210 + -12.8  -4.77757   CTGCTTGCGGTACAA            CGCCTCGG TCAG CCGGGGCG             TTTTCATTTTTGGAC 100 40
        pqqB NONE
        pqqC NONE
        pqqD NONE
        pqqE NONE
LOY33_RS23740 5197504 .. 5197515 +  -2.2  -3.19192   CGATGCGCAGGAACG                CGAG ACGG TTCG                 TTGAATTCGGTACGG  44 408
LOY33_RS23760 5200553 .. 5200568 + -11.8  -4.11773   CCGGGCAAAAGAAAA              CCCCGC CGAA GCGGGG               TTTTGCAGACTGTTT  90 48
LOY33_RS23810 5211906 .. 5211917 +  -2.2  -3.17075   GGCACGCACGCCCAA                GC-CC GGC GGCGC                TTGACTTGCGCCGGG  41 10
LOY33_RS23815 NONE
LOY33_RS23820 5213892 .. 5213908 +  -2.9  -3.11569   GAACCTGCTGCCAGT              CTGTCTA CAA TAGCCGG              GTTTTAGATAGCTGC  43 40
        rarD 5215122 .. 5215136 +  -2.7  -3.55444   GCTTCCAGGTGCACG               ACGGC TCGAT GCCGC               TTTCGGCGATCAGCA  49 319
LOY33_RS23835 5217875 .. 5217900 + -19.1  -3.54424   CACTGCCTGACGCAC         CCCTTCGCTGG CAAG CCAGCGAAGGG          TTTCAGCCGATGCCC 100 52
LOY33_RS23845 NONE
LOY33_RS23850 5221276 .. 5221290 +  -4.2  -3.34522   CGGCTCTGACACAAT               CGCGAA TAA TTCTCG               TTAGTTAACGCATCT  49 88
LOY33_RS23855 5221830 .. 5221844 +  -4.2  -3.05384   GGCGCTGTACGGCGA               GCCG ACATGAC CGGC               TTCAGTAGCAGGCCG  45 16
LOY33_RS23860 5222804 .. 5222862 + -15.3  -2.60977   GGGCGAGACCCCGTA -AAACGCCTTCGCCGGCAACGCCCTC-CT GCA GGAGCGGGCGTTGCCGGCGAAGGCCTCAA CATTATTTTTTGCCC  81 25
LOY33_RS23865 5225366 .. 5225378 +  -4.8  -3.28712   CAACGTGGTCGCCAG                CGTG AACTA CACG                TTCTAGGGCCAACGA  49 7
LOY33_RS23870 NONE
LOY33_RS23875 5226679 .. 5226721 + -11.3  -3.28712   AATCTTGGTCGGCAA GGCCGGCGCCTGCAAGGT TTCACGTC GTCT-GCAGGAGCCGGCC TTGTCGGCAAAGGCG  71 39
        aceE NONE
        aceF 5241552 .. 5241571 + -10.6  -5.47218   CACGCTCGTACCTCA            ACCCCGCC ATCT GGCGGGGC             TTTTTTTGCCTGCGA 100 95
LOY33_RS23930 NONE
        msrA NONE
LOY33_RS23940 5245972 .. 5245998 +  -3.6  -2.90496   CCGCGATGAAGTCGA         CGCTGATCTCGG CAG CCCAGATCAACC         TGATTTCCCCCACCA  44 127
LOY33_RS23965 5251611 .. 5251631 +  -6.7  -3.23216   GGCGTCGATGAATGC            GGGCAGCAG GTT CGGGTGCCC            TTCGTGCTGCTCCCA  54 331
LOY33_RS24030 5267263 .. 5267288 +  -6.2  -3.28416   TCACCGCCGACTGCT        CCT-C-GGTGGC CGTG GCCACCTGCAGG         TTCATGTCGGTGATG  53 271
LOY33_RS24050 5271639 .. 5271674 + -19.7  -4.65895   AGCGTGTAGGTCGCC    ACCGGGC-CCCGGCGC AGTGC GCGCCGGGCGCCCGGC    TTTTTCGATCGGCCC 100 32
LOY33_RS24055 NONE
LOY33_RS24060 5274348 .. 5274361 +  -5.9  -3.43492   CGGCCTCGTCGTCCT               CGGTG ATGC CGCCG                TTGTGCTCCATGTCC  55 96
        gbcA 5277334 .. 5277352 +  -6.6  -2.52795   CCCCGATTTTCGCTG             CCGCGTGA GTA TTTCGCGG             TGGATTGACGAGGTT  48 410
LOY33_RS24105 NONE
LOY33_RS24110 5288154 .. 5288167 +  -4.5  -2.75963   CGCTTAGCGTCGGGC               GACGG GTCT CTGTC                ATTTAGCCTGGCACT  44 34
LOY33_RS24115 NONE
LOY33_RS24120 5289049 .. 5289091 +  -3.3  -2.62184   TACAAGAGCGCCTGT GCGGCGCTGCTCAAGCGC GGCTGAGG GCGCCTGCGCA-CGTCAC TGATCTAGCCAAAAA  40 2
LOY33_RS24125 5289484 .. 5289497 +  -3.7  -3.07994   TCGCGGGCCAAGCCC               GCTCC CACA GGCGC                TTCACTGCCCTTCAG  45 46
LOY33_RS24140 5293743 .. 5293773 + -18.3  -3.94188   ACGCAGTAAGCACGC       CCCGCGCCGGG GGGCGATTG CCCGGCGCGGG       TTGTTTCCAATCCCT 100 32
        choW 5294646 .. 5294661 +  -3.2  -3.17075   CGCACCGGCAAGGAG              TGAAGC ATGA GCATCA               TTCGCTTCGAAGAGG  43 16
        choV 5295844 .. 5295864 +  -3.1  -2.52464   GAAGCGGATGGCTTC            TTCGCCGGC AAG GTCAGCGCA            TGACTTGCCAGCGAG  39 39
        betI NONE
        betB NONE
        betA 5304255 .. 5304269 +  -7.1  -5.60993   AACAGCACGAATCAA               GCACC CCTGC GGTGC               TTTTTTTGTGCCCGC  95 131
LOY33_RS24185 5306127 .. 5306139 +  -6.9  -3.54489   CGAAGGTTCTCGACC                CGGCC CCG GGCTG                TTCCTTTAAACTTCG  60 4
        mscK NONE
LOY33_RS24195 5311004 .. 5311044 +  -9.7  -3.14132   CCGATTCGCCAGCAA  TGCTGGCTCCTACAGGT TAGCGCC GTCCGTAGGAGCCAGCC  TTGCTGGCGAAAAGA  64 55
        trxC 5312166 .. 5312176 +  -6.8  -3.30159   GCAGTTCGACGAACT                 GCTG GGT CAGC                 TTGTGCCGCGGTTCC  54 60
LOY33_RS24220 5315252 .. 5315305 + -31.9   -3.2281   TGTGAAGGGCTGATA C-CCCTCGCCGGCAAGGCCGGCTCCT ACC AGGAGCCGGCCTTGCCGGCGAAGCTG TTCAGTTGATGATTT 100 28
LOY33_RS24285 5333481 .. 5333504 + -13.8  -4.72272   AGCCCCAAACAAAAA          GCCCCGACTC TCGC GAGCCGGGGC           TTTTTGCTACAACGC 100 90
LOY33_RS24305 5338464 .. 5338476 +  -7.7  -3.28712   TGAGCCCTGGCCCTC                TGCAG AGC CTGCA                TTGTCGGCCAAAGGG  59 77
        argS NONE
LOY33_RS24315 5341032 .. 5341055 +   -21  -2.90496   GTAACCCCGATGTTC          GGCGGCCCGC AGCA GCGGGCCGCC           TGCTTTCAGGCCCGC 100 37
LOY33_RS24325 5342281 .. 5342312 +  -6.4  -3.55444   GGCCAAACGCTAGAC      CTGATCGGGCGAAC GCGC GTTCGCCCTGGCCG       TTTCCAGGCTGACGA  58 28
LOY33_RS24335 NONE
        proC 5344927 .. 5344938 +  -4.4  -2.71712   GCAACTAAGGAGCTC                TGCA TGAA TGCA                 CTTTCGGGCGCCGCG  44 33
LOY33_RS24345 5345524 .. 5345576 + -18.3  -3.41222   CGCATGATCTGACCC GCACCACCCCCGGCCGCAAGCCGCG CCA TGTTGCTTGCCGCTGGGGGTGGCGG TCTTTAGACTTACGC 100 29
LOY33_RS24350 NONE
        metW NONE
LOY33_RS24360 NONE
        rdgB NONE
        hemW NONE
LOY33_RS24375 5350178 .. 5350203 +    -9  -3.02461   TGGTGATCGGACGCT         CGGCAGG-GCG AGGTA CGCACTTGCCG         TCTTCGGCCAGGTTC  57 222
LOY33_RS24425 NONE
LOY33_RS24430 NONE
        rsmD 5361074 .. 5361084 +  -4.6  -2.81272   CCAGCAAACTGCGGC                 CGCC TGA GGTG                 CTTTGCCTGATCGTG  44 55
LOY33_RS24440 5362750 .. 5362768 +  -3.9  -3.29144   CGCATCGGGCTGCCC            GC-TGAAG TTGC CTTCACGC             TTGTCACAGGCATCC  47 434
LOY33_RS24455 5365536 .. 5365557 +  -2.3  -3.03214   CACTCGGCCTGCAGC           GG-GTGACAA GCA TTATCACGCC           TGTCTATAGTGCCTT  41 147
        coaD 5366155 .. 5366175 + -11.8  -3.14211   CCGCATCGAAAACCG            CGCCCGCG TGCAC TGCGGGCG            TTAATGCGGCACAAT  73 47
LOY33_RS24465 5366660 .. 5366705 +  -7.5   -3.2794   GCCGCCGATGAAGTC GCGCAGGGTGGT-GCCGCCA CGCTCGA TGGCGGCGGCCAGGATGCGC TTGATCTCGATGGCC  56 191
LOY33_RS24480 5368874 .. 5368907 +    -8  -2.79679   CCTGATCGGCTATTT     GT-CGCCGGCCGAGC CGCGT GCCCGGCCGACGCGC     TATACTCCCGCTCTT  54 36
LOY33_RS24485 5370153 .. 5370171 + -11.7  -5.83822   TGCTTGGAATGAAAA             TCCCGGC CAGGT GCCGGGA             TTTTTTTTGCCTGTA 100 42
LOY33_RS24495 5373644 .. 5373660 +    -5   -3.6581   GAGCTCTGGTCGAGC              CCTCGG CGATC CCGTGG              TGTTTTCGGCCTCAT  56 165
        ilvD 5375625 .. 5375642 + -14.1  -5.81412   TGGCAAAATAAAGAA             CCGGCGC CCAG GCGCCGG              TTTTTTTTGCCTGCG 100 45
LOY33_RS24505 5377823 .. 5377844 +  -5.7  -2.81045   TTGAAATACTTGAAA           TCCCCCGGC AAAT GCCAGGGCA            TGCTGTTGTCGATGC  46 518
LOY33_RS24515 NONE
LOY33_RS24520 NONE
        cadR 5389778 .. 5389823 + -24.3  -3.25823   CCCTTTCGCCAGCAA GGCTGGCTCCTACAGGGGATCG CGG TGAT-CCTTGTAGGAGCCAGCC TTGCTGTCGAAGCGG 100 48
LOY33_RS24575 5393552 .. 5393568 +  -3.7  -3.80841   ATACCCATCGCCTGC              TCCAG CAATTCC CTGGA              TTTGCTCATGCTGAT  57 223
LOY33_RS24590 5397072 .. 5397100 +  -2.3  -3.05046   CAACCGGTGTAGGAG       CCGGC-GTTGCC GGCGAA GGCATCAGACGG        GTTTTGCACCCATCA  41 79
        rpiA 5399920 .. 5399938 +    -3  -3.21276   GCGGGCCAAGCCCGC             TCCCACAG GTT CGGTGTGA             TCTTGTGGGAGCGGG  45 61
        serA 5405585 .. 5405602 + -12.7  -5.14563   GATCCAAATGAAAAA             GGCGACC CTCG GGTCGCC              TTTTTTCATGCACGC 100 60
LOY33_RS24640 5407153 .. 5407165 +  -3.3  -3.54424   AGCACCGCACTGCCC                TGCCC ACC GGGAA                TTTCCGCAGGTGGCC  49 329
LOY33_RS24655 5408949 .. 5408965 + -10.9  -3.29144   GTTCGGCGAACTTGG              CCTTGAG CAC CTCAAGG              TTGTACGGCCAGTCC  66 142
LOY33_RS24665 5410783 .. 5410801 +   -11  -2.53271   GTTGAAGTTGACGAA             CACGTTGG CGC CCAGCGTG             ATGTTGTAGCCGTAG  59 325
LOY33_RS24675 5413608 .. 5413646 + -18.2  -2.71364   GCTTTTTCAGATCAG  GCCGAGACCTGCGCCGC AGTGGC GCGGCGCACGTC-CGGC   TGCTTCCACGAATCC 100 132
LOY33_RS24715 5424160 .. 5424172 +  -4.7  -3.06261   CAACTCGTCGCCACG                CCCGC CAT GCCGG                TATTCCGGGTTCACC  45 302
LOY33_RS24730 5428256 .. 5428267 +  -7.2  -3.28497   TCGGCGAAGTTGGTC                CGCC CGTG GGCG                 TTGAGTTTGACCTCG  54 255
LOY33_RS24740 NONE
LOY33_RS24745 NONE
LOY33_RS24750 NONE
LOY33_RS24755 NONE
LOY33_RS24760 5432653 .. 5432674 + -11.5  -2.57132   CACCTCGCCGGCAAT           GCCGGCTCC TACA GGAGCCAGC            CTTGTCGGCCACGAG  66 42
LOY33_RS24810 NONE
LOY33_RS24815 5445181 .. 5445193 +  -5.5  -2.78463   CGGGTTCAAAACCGG                CCTGA GTT TCGGG                TATACTCCGACCACT  47 21
        ssrS 5445372 .. 5445384 +  -5.5  -2.57931   ACCGACAGCGGTTCG                TCGGG GAG CCTGA                ATTCTCCAGCCTGCG  46 15
LOY33_RS24825 5446369 .. 5446379 +  -4.6  -3.72695   AAACGTTGACGCCAA                 CCGG CTG TCGG                 TTTCATGCAACAGGT  56 320
LOY33_RS24835 5446852 .. 5446869 +  -3.3  -3.53031   GGACGAACAATGGGC             CGCGGTG CTCG CACTACG              TTAATTTCGCGTAAG  49 4
LOY33_RS24840 NONE
        rbbA NONE
LOY33_RS24850 5451805 .. 5451826 + -10.8  -3.65314   GGTTGTTGAACAGCA           GGTCGGCC ACCACC GGCCGGCC            TTCTTCGCCGTTGAG  73 55
LOY33_RS24860 5453495 .. 5453505 +  -4.6  -3.40403   ACGACCAGTCCTCCA                 CGGT CAT GCCG                 TTGTACTCGGCCCAG  51 200
         ppx 5461700 .. 5461716 +  -5.7  -3.51329   GCTCGAGCAGAGTGG              CCTGGGC ACT GCGCGGG              TTCTGGTTGCCGGTC  54 59
LOY33_RS24915 NONE
        elbB 5466813 .. 5466826 +  -9.5  -3.02144   TGCAGATCACCAACT               CGCCG GGCA CGGCG                TGTTCCACCAGGTAG  57 287
LOY33_RS24935 NONE
LOY33_RS24940 NONE
        lpoB NONE
LOY33_RS24950 5472220 .. 5472237 + -12.7  -5.49234   GCTGAGCATGCAAAA             GGCGACC TTCG GGTCGCC              TTTTTTATTGGGTGT 100 36
LOY33_RS24970 5476476 .. 5476502 +   -10  -4.09864   GTTTGGCAGCTGGCT         TGGCCGCGGCTG GCT TGGCCGCGGCAG         TTTTGGCCGCTGGCT  78 426
LOY33_RS24980 5477932 .. 5477944 +  -6.2  -3.51235   AGGAGACAGGGATCA                GGCC TGGAC GGCC                TCTTCTTCCTTGTGC  58 54
        argH 5486137 .. 5486159 +  -9.8  -3.49668   TACGCACCATCTCGA           GGAAGGCCGG CAT CTGGGCTTCC           TTGTCTGCGGCGTTT  67 97
LOY33_RS25035 5487267 .. 5487283 +  -2.9  -3.09349   GGTGCTGCCCTCCAC              TTCAGGA AAG TCCGGAG              TATCTATGTCGTTTA  43 92
LOY33_RS25040 5487689 .. 5487701 +  -3.3  -2.50113   CCCTCGCCCCGTAGC                GGCTA AAC TCGCC                ATTGCTCCCGTGATG  39 177
LOY33_RS25045 5491060 .. 5491077 + -14.1  -3.88464   CGTTATAAAGCAAAA             CCCCGCC CAAG GGCGGGG              TTTGCATGTTTTTCG 100 501
LOY33_RS25065 NONE
        lysA NONE
        dapF NONE
LOY33_RS25080 NONE
        xerC NONE
LOY33_RS25090 5496596 .. 5496614 + -11.6  -3.41024   GCCACCCACAAAAAA             GCCCGCAG CGA CGGCGGGC             TCTTCTGTTCGACGG  73 146
LOY33_RS25110 5499756 .. 5499799 + -15.9  -3.40403   AGCGCAGCCTTCGTC GGCGGGGCCGGCGCCTGCA GGGTCA TGCAGGGGCCTGCCTCACC TTCTCATACCGCACA  89 46
LOY33_RS25115 5501525 .. 5501535 +  -2.4  -3.09933   GAGGCCCTGCAGTAC                 CGCC CCG GGCC                 TTAGGTGCCTTGACG  41 11
LOY33_RS25120 NONE
LOY33_RS25125 5503331 .. 5503341 +  -6.8  -2.58544   CTATGAGCACGCCCA                 GCCA TGA TGGC                 CTTCTGGGAGTCCCA  50 19
LOY33_RS25150 5511835 .. 5511847 +  -3.4  -2.57344   ACAGGAATGATCCCT                CGAA TTTTT TTCG                CTTGTGCCCGGCCTG  40 44
LOY33_RS25155 5513330 .. 5513354 + -12.1  -3.01712   GCTTCGCCGGCAAGG          TCGGCTCCTAC ACT GCAGGAGCCGG          TCTTGCCGGCGAAGG  71 43
LOY33_RS25170 5518167 .. 5518181 +  -2.8  -3.20382   GCAGCCAAAGCTGCG               CAGC AACGCCA GCTG               TTCCTCGGTCTCCAC  44 199
         rep 5522005 .. 5522027 +  -8.3  -4.19817   TAGATAATCCACCTT           TGCCCTGGC TTGTT GCCGGGGCC           TTTTGGCTACATCGA  74 38
LOY33_RS25185 5522712 .. 5522722 +  -5.4  -3.53012   GCCGGCGAAAGCGTT                 CTAC GCG GTAG                 TTTGCAAAGCCGCCA  55 110
        dadR 5529514 .. 5529537 + -12.4  -3.08679   AGTTGAGCTCATCCA          GCGCGGCC TGTTGCTC GGCCGCGC           TCTTGCGTGGCAGGC  69 226
LOY33_RS25230 5531202 .. 5531235 +  -7.3  -3.73224   CAGCCCAGCGACTCG     GGCTGGCTGGCGC CTCATGTC GCGCCACCTCGCC      TTTGGTGCACAGTGG  61 162
LOY33_RS25240 5532957 .. 5532972 +  -4.6  -3.23216   CCCTTTGACCAAACC              CAGGGC CTTC GCGCTG               TTACTGATGCTGGCG  49 97
LOY33_RS25245 5534585 .. 5534626 +  -9.5  -3.05384   TAGGCAGAGCGATAG GTTTGCGACTTCTTGCGCA GTAC TGTGCAAGAAGTTGCGCAG  TTGGCTGCAGGCCAC  64 108
LOY33_RS25260 5538111 .. 5538145 +  -3.4  -2.82623   CATAGATAGATACCG    CCGCGCCA-GCCCTC CCTGGC GCGAGCATGGCGAGG     TCCTTATCCGGACCC  41 43
LOY33_RS25265 5538455 .. 5538478 + -18.2  -5.14563   ATCGCCATAAAAAAA          GGCCCGCATC GTGA GATGCGGGCC           TTTTTTCGTAAGCCG 100 48
LOY33_RS25280 5540990 .. 5541003 +  -2.3  -3.19522   CAGCGAACCGCACCG               TACGG ATAG CCGCA                TTGGATATTGAATAC  44 159
LOY33_RS25285 5541911 .. 5541953 +  -9.1  -2.92389   TCCAGCACCCGCACC TCGATCAGGCCCAGGGCTT TCTGC AAGCGCAGGGTCAGATTGA TATCTGCCTGGCTTG  56 126
       coaBC NONE
         dut NONE
LOY33_RS25305 5545153 .. 5545164 +  -2.2  -3.54424   ACCCAACATAGCCCC                TTCC AATT GGAG                 TTTCCCCAGGTGAGC  47 150
        argB 5547566 .. 5547583 + -12.7  -5.30616   CACAGGTACAAAAAA             GGCGACC CGCG GGTCGCC              TTTTTGTTTGCCTCA 100 82
LOY33_RS25325 5549116 .. 5549132 +  -9.4  -4.84527   CTCAGCCACAAAAAA              GCCGAC TGCGT GTCGGC              TTTTTCGTATCTGGC  93 44
LOY33_RS25340 NONE
         gmk 5552097 .. 5552130 + -12.5  -3.05384   TGCTTGCCTGAGCAG    C-GTGCCCCGGCCGC TTAACC GCGGCCGGG-CACCG     TTGCGTGACGGCGCA  76 30
LOY33_RS25365 5557048 .. 5557059 +  -4.4  -3.54459   TGGGGCGCCAGGAGG                GTCA GGCC TGAC                 TTTCGGGCCCCTTCG  53 15
        rpoZ NONE
        spoT NONE
LOY33_RS25380 5560156 .. 5560186 + -12.5  -2.52623   CCTCGAGTAATACCT      CGCG-CGGCGGGCC GGCC GGCTCGCCGCCGCA       CTGTTCTGGAAGGAC  71 31
LOY33_RS25385 5561366 .. 5561381 + -10.4  -3.04144   GCTGGCCGGGATGCC              GCTGGC CAGT GCCAGC               TGTTCGGCCTGGAGC  60 449
        exbB NONE
        exbD NONE
LOY33_RS25405 5564205 .. 5564259 +  -7.4  -3.31144   ACGCAAGTCTGATAA CGTGCGTCTATCGA-TTGC-AGCC GCTATGCTG GGCTCGCAACTTCATGGACGCACG TTATGACCCTCACAG  56 63
LOY33_RS25410 NONE
        recG 5567290 .. 5567309 +  -4.8  -2.78816   CCCATGTCGACGCGG            GCCGCCCC CATC GAGCCGGC             TATACTGGCCGCTGA  44 48
LOY33_RS25420 5568755 .. 5568775 + -14.7  -4.44667   CACTGACAACCTGAA            GCCTGGGCG CTG CGCTCAGGC            TTTCTTCTTGCGCGG 100 35
LOY33_RS25485 NONE
        ubiA 5577604 .. 5577614 +  -6.8   -2.8294   CATTGCACATGGATT                 TGCC GCC GGCA                 TCCTTGTCGAAGGTG  50 276
        phoB NONE
        phoR NONE
LOY33_RS25510 5581760 .. 5581774 +  -5.6  -4.33907   GCCGGGTTGGTACCG               CGCCCG CTC TGGGTG               TTTTCCGTCTTTATC  72 309
LOY33_RS25555 NONE
LOY33_RS25560 5593852 .. 5593884 +  -9.8  -2.79831   TGACCTTCTCCACCT      TCAGCGTGCCGCTG ACCCA CAGCGGCGTGTAGA      TATCGTCCAGCTTCA  57 219
        aspA 5599048 .. 5599074 + -15.8  -5.81412   CCTCTCACCTTTTGA         GGGCCCAGGGAC TTT GTCTCCGGGCCC         TTTTTTTTGCCTGCG 100 82
LOY33_RS25600 NONE
LOY33_RS25605 NONE
LOY33_RS25610 5602978 .. 5602996 +  -2.3  -2.70932   TGCAAGGCGTGCCAG            GGCCTGGG CAAT CGC-GGCC             TCGTTCACGGCCGCG  38 61
LOY33_RS25620 NONE
LOY33_RS25625 5605898 .. 5605912 +  -2.8  -3.77831   CCTTGCCGGCGATGG               CCGA TTGCACC TCGG               TTTCCATCTTCATCG  56 206
LOY33_RS25640 5610552 .. 5610587 + -11.9  -3.08015   CCTTGATCGACTTGG    GCGACAGGCGCAGGCT GCGCA AG-CTGCGCTTGACGC    TCTTGAGGTGGTTGA  66 377
         zwf 5612958 .. 5612968 +  -6.8  -3.09516   TCCGGCTGCCGGGTG                 CAGC CGC GCTG                 TTCGATAGTGGGCAC  54 47
LOY33_RS25660 5613589 .. 5613606 +  -4.7  -3.14132   GATCGCACGGGTGAT             TGCGGCG TCCT CGCTGCC              TTCGTGCAGGCCACG  47 276
        uvrD 5618730 .. 5618752 +  -2.7  -3.14463   CTGTGGGAGCCGGCC          TT-GCCGGCG AAGG TGTCGGCCAA           TTCCTACACGCACTT  41 66
LOY33_RS25675 5619756 .. 5619773 + -14.1  -4.67641   GCATTGCACAAAAAA             CCCCGGG CTTG CCCGGGG              TTTTGCTTTTAGCGT 100 48
LOY33_RS25680 5620307 .. 5620332 + -11.1  -3.14051   TCAATCTTCGTAGAA         TCGCCGCGC CTTCCTGT GCGCGGCGG          TGTTGCTACCGCTCC  69 80
LOY33_RS25685 5621568 .. 5621584 +  -2.2  -3.96148   GACAGCAGCAACGCC              GCGC CCCAGATCA GCGC              TTTCTGCTGGGCCAG  56 371
LOY33_RS25695 5623838 .. 5623882 +  -8.4  -3.53091   GGTGCATGATGCGGT CCTGAGCACGCACCAGCTCC AGCTC GTAGCTGGTGCAAGCCTGGG TTTCCAGCAGCACCT  62 75
LOY33_RS25705 5625184 .. 5625218 + -10.7  -3.02511   GTTCCCTTCGTCTAC     CGGGGCCAGCCTT GCCTGCAAA AAGGCCGGCCCTG     TCTTCAGGGAATCCG  66 42
LOY33_RS25725 NONE
       folE2 5629523 .. 5629535 +  -4.8  -3.22491   ATCGTTGCCCAGCCA                CACC GCACG GGTG                TTCATGCTGCCCTTT  49 68
         cls 5631747 .. 5631757 +  -4.6   -3.3164   CCTTTTCCGGCACCA                 GGCT CGC GGCC                 TTGTCCAGCTGGCTT  49 196
        lpdA 5634425 .. 5634451 +  -5.1  -3.61178   TCACCGCAGGTTCAG        GCACGCACCGGGT CAG GCCTGG-GCG-GC        TTTGGGCTGAGTACC  53 91
LOY33_RS25770 5639849 .. 5639860 +  -7.2  -4.64766   GTTCAACCAGCAGAA                GCGG CTGC CCGC                 TTTTTCCGGTGTGAA  79 92
LOY33_RS25795 5644133 .. 5644160 +   -20  -4.13014   GGGTGCGACAAGCAG        GATCCGGGAAGG CGAA CCTTCCCGGATC         TTTTGGCGGTGTGGA 100 54
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC 5661922 .. 5661938 - -10.8  -4.41353   CGACAGATAGCAAAA              CGCCCC ACGAG GGGGCG              TTTTATCCACAGGTT  88 55
        mnmE 5660478 .. 5660498 -  -7.5  -3.35438   GATGACAGCCGACAA            CGAGGCC CTGGATC GGCCCCG            TTGTGGATAAACGGA  58 41
        mnmG 5658111 .. 5658129 -    -3  -3.27164   GACCATAGAACTCAA             GCGCTTTG CTC CAACTCGC             GGCCTGCGCCGCGTT  45 3
        rsmG NONE
LOY33_RS25865 NONE
LOY33_RS25860 5655667 .. 5655680 -  -3.9  -3.30619   AATGACTTGGCATAA               TTTGT GCCG ACAAA                ATGCGCGCAGAGTAT  47 110
LOY33_RS25855 5655205 .. 5655215 -  -2.4  -2.71791   ATGTTTGCCTCAAAC                 GCCC TAA GGTC                 TCGAAAGTCTCGTTT  39 18
        atpB 5654237 .. 5654248 -    -3  -4.14392   TTTGAAGCGGTAAAA                CAAA ATCG TTTG                 GTACAGCTGCCCTTG  60 99
        atpE 5653902 .. 5653921 -  -8.6  -2.57468   GTCCATCACACCAAT            CCACTCGA AAAT TCGAGTGA             TTAGCCAGCGATTTG  57 26
LOY33_RS25840 NONE
LOY33_RS25835 NONE
        atpA 5651251 .. 5651272 - -17.3  -3.17212   CTATCAGGTTAGCAA           GCGGGGGCT GCAA AGCCCCCGC            TGCGGCTTACCAGGT  91 32
        atpG 5650373 .. 5650389 -  -9.3  -3.60971   ATTTGAACCGTTAAA              CCGCGGC AGC GCCGCCG              ACGATTTCCGAGATC  69 4
        atpD NONE
LOY33_RS25815 5648440 .. 5648457 - -11.3  -5.69262   GCAGAAAAAGAAAAA             GGGTAGC CGAG GCTACCC              TTTAACTCAATCGCG 100 68
        glmU 5646823 .. 5646837 -  -2.8  -3.25786   GACATGAGAAGTTAA               GTTTCG ATT CGAAAG               ATAATTACGTCAATC  45 193
LOY33_RS25805 NONE
        glmS 5644132 .. 5644161 - -16.5  -2.82623   CGGGTGCGACAAGCA       GGATCCGGGAAGG CGAA CCTTCCCGGATCT        TTTGGCGGTGTGGAG  87 62
LOY33_RS25790 NONE
LOY33_RS25785 NONE
LOY33_RS25780 NONE
LOY33_RS25775 5639849 .. 5639860 -  -7.2  -3.47227   GTTCAACCAGCAGAA                GCGG CTGC CCGC                 TTTTTCCGGTGTGAA  58 89
        hcnA NONE
        hcnB NONE
        hcnC 5634172 .. 5634202 -    -6  -3.57144   TGGCCGATGCCGAAA       CCGACGAGGTACTC GGC GTGCACCTGGTTGG       CCCGTGCGTCAGCGA  56 260
        cfaB 5631351 .. 5631367 -  -2.1  -3.28712   GGTGCTGGTCGACAA              CGAGGTC AGC GCCATCG              GCAGTGCCAACCTGG  44 244
LOY33_RS25735 5628976 .. 5628987 -  -2.2  -4.07568   CGCGCGTTTGGAAAA                CGGA GTGT TCCA                 CGTGGAACTAAACGC  58 519
        zigA NONE
LOY33_RS25715 5626210 .. 5626225 -  -3.9  -2.93723   TCGTCAGGAAGGATA              CGCAC TATGCT GCGCG               CTCAGGCCATCCAGT  44 27
LOY33_RS25710 5625131 .. 5625167 -  -9.5   -3.2794   CGTGATCGAGATGAA   CCAGTGGCGCCAG-GA GCACAA TCGCTGGCGCCAGTGA    CGTTCCCTTCGTCTA  66 80
        pdxY 5623701 .. 5623731 -   -11  -4.28994   GACCAGCGAGGAAAA       GCGCCGCTTCGTGC AAG GCAAGCAGCGCCGC       CTGATTCGCCAGGAA  89 79
LOY33_RS25690 5621177 .. 5621203 -  -6.5  -2.88579   CGAAGGCTGGACACA        GGCCTGGGCCCA ATGG CGGGACCAG-CC         GCTGCGCTGCAAACC  51 41
LOY33_RS25665 5613363 .. 5613393 - -19.7  -3.30124   TTCGACTTGTTACAA       CGCCAGGGCCCCG TTGAT CGGGGCCCTGGCC       GTGGGGCTACCAGCG 100 32
        hexR 5610441 .. 5610456 -  -3.2  -4.38712   GGGAGGGTTACAAAA              GCATGA ACAA TCAGGC               GTGGCATGCGGTGCT  64 92
LOY33_RS25645 5610038 .. 5610056 -  -8.8  -2.62184   GCTGCCGGTAGAGGA             GCTGCCGT TGT ACCGCAGC             TGGTGCGTGGTGCAG  57 111
LOY33_RS25635 NONE
        oadA 5605761 .. 5605779 - -12.4  -5.84432   CAGAAGATAAAAAAA             GGGGAGCA ATT CGCTCCCC             AGAGGTTAACCGCTT 100 58
LOY33_RS25615 5602645 .. 5602666 -  -7.9  -2.75481   CTGCAACTTCAACTA           CCCGCTGCC GGCA GGCAGCGAC            TGGGCCACCTGGCGC  51 304
LOY33_RS25595 5598958 .. 5599007 -  -8.5  -2.78032   GCGTCCGGAAAACAT GATTGCACCGCGTCTGGTACCGCT CAA AGCGTAACC-GACGCCGTACTACC GCTCACCAGGTTGAG  58 136
LOY33_RS25585 5596314 .. 5596350 - -17.4  -5.00884   AGGCGCGTCAAAAAA    CAACAAGCCACGCAGG GACGA CCGGCGTGGCTTGTTA    TGCGAATTAGGGCCG 100 158
        purE NONE
LOY33_RS25575 5594613 .. 5594653 -  -4.9  -2.52464   TTCCCTCTGAATTGA GTGCACGA-GCCAAAGC-CT AGTC AGCGCTTTGGCATCCTGC-C ATCAGAGGGATGCGC  43 58
LOY33_RS25570 5594305 .. 5594333 - -14.7  -5.52384   GGCGCATGAAAAAAA        GCTCGGCAACT GACGGAA AGTTGCCGAGC        ATTCTAGCGCCCTGT 100 40
LOY33_RS25565 5593650 .. 5593671 -  -4.3  -3.06302   AGTATCGGCAGCGAA           CCGCTCTAG ACCG CTATCGCGG            GTCAAGCCCGCTCCC  45 117
LOY33_RS25550 5590586 .. 5590612 - -13.1  -3.89971   GACAATTAGATGAAA        GGCCATCACCTC GTTC GAGG-GATGGCC         TTTATAGCGGACGCG  87 51
LOY33_RS25545 5589405 .. 5589435 - -13.3  -5.09895   CAGTGACGCAAAAAA      GCCCGCCGCTCAGG CATG CCTG-GCAGCGGAC       TCGCAATTTGCAGCG 100 76
LOY33_RS25540 NONE
        pstA NONE
        pstB NONE
        phoU 5583598 .. 5583617 - -16.4  -4.54727   TGCCGCAAACGAAAA            CGCCCGGC CAAG GCCGGGCG             TTCATTCTCGGGGCA 100 44
LOY33_RS25520 5582558 .. 5582572 - -11.4  -3.78775   GCTGCGAGCAGCAAA               GGGCCT GTC AGGCCC               CCGGCACGAAGTGCT  78 18
LOY33_RS25515 5581137 .. 5581147 -  -2.4  -3.01712   TGCCCTGGTCGAAGA                 GGCC GAT GGCA                 AGGTGATCGGCTACC  41 361
LOY33_RS25495 5577073 .. 5577093 -  -2.5  -3.07222   ACGACGACCTGAAGA            TCGGGGT CAAGTCC ACCGCGA            TCCTGTTCGGCGAAG  41 318
LOY33_RS25480 NONE
LOY33_RS25475 5574298 .. 5574322 -  -5.7  -3.29263   AGACGGGTGTGAGAA         TGGCAC-GCC GCCAGT GGCCGCGCCA          GTCTCTGGGCGGCCA  51 85
LOY33_RS25470 5573865 .. 5573893 - -13.9  -4.14627   CCGCCACACAAACAA        GAACGGGCACC TTGTAGG GGTGCCCGCTC        TTCAATGCAATCAGT  95 52
LOY33_RS25465 NONE
LOY33_RS25460 NONE
LOY33_RS25455 NONE
LOY33_RS25450 NONE
LOY33_RS25445 5571807 .. 5571817 -  -2.4  -2.87931   TTCATGGCTGATACA                 CCGG AGG CGGG                 TTGATGTAGTACTCG  40 1
LOY33_RS25440 NONE
LOY33_RS25435 NONE
LOY33_RS25430 5569205 .. 5569245 -  -2.6  -3.72576   TTTTTTGCGACCAAA GGC-TACAGCCGACTTC GCTTTGTT GAAGGCGACTGTATGTC  AGGGTGTGCGGCCTA  51 38
LOY33_RS25425 5568654 .. 5568672 -  -3.8  -3.02511   TGGAGCGCCTGAACA             TCAGCC GCGAGAA GGCCGA             GGACGTGGTGCACAA  44 123
LOY33_RS25390 5560848 .. 5560863 -    -6  -3.05963   AGCGTGATGGCAAGA              CGCTGG AAAT CCTGCG               TGCCCTCAACAGCGC  49 117
LOY33_RS25360 NONE
LOY33_RS25355 NONE
LOY33_RS25350 5552069 .. 5552096 - -18.6  -3.13475   CAACGTCACAGCGAA        CTGCTCAGGCAA CTGC TTGCCTGAGCAG         CGTGCCCCGGCCGCT 100 40
         rph NONE
LOY33_RS25330 5549116 .. 5549132 -  -9.4  -5.28176   CTCAGCCACAAAAAA              GCCGAC TGCGT GTCGGC              TTTTTCGTATCTGGC 100 123
        pyrE 5547566 .. 5547583 - -12.7  -5.29782   CACAGGTACAAAAAA             GGCGACC CGCG GGTCGCC              TTTTTGTTTGCCTCA 100 38
        radC 5541389 .. 5541415 -  -2.2  -2.72511   TGCAGGTGCTCAAAG        CCGTTCAGCAC CAGGGC GAGCCGA-CGG         AGTTCGGGCTCGGCG  38 442
        rpmB NONE
        rpmG 5538455 .. 5538478 - -18.2  -5.61596   ATCGCCATAAAAAAA          GGCCCGCATC GTGA GATGCGGGCC           TTTTTTCGTAAGCCG 100 48
LOY33_RS25255 5535964 .. 5536000 - -24.6  -3.44622   GATCGCCACAAGCAA   CACAGCCGGG-CCTGCG CTAA CGCAGGGCCCGGCTGTG    GCGCGGATCGCTCGG 100 69
LOY33_RS25250 5534729 .. 5534771 -   -10  -3.82097   GTGAAAGCGACGAAA GGTGAAATCCCC-CGAGAA TAGCGC TCCTCGAGGGGATTCAACC GGTACAAAGCGGCCC  77 40
LOY33_RS25235 5530565 .. 5530575 -  -4.6  -3.06302   ATCATCGCCACCGAA                 CCGC TGA GCGA                 AGCCCTGGCCAACGA  45 512
LOY33_RS25225 5528932 .. 5528947 -  -6.1  -3.30159   CGAACTGGGCGAGAA              GGTCG GCCTGT CGACC               ACCCCGTGCACCGAG  53 395
        dadA NONE
LOY33_RS25210 NONE
         alr 5525897 .. 5525909 -  -3.3  -3.25896   TCAGTATTTACAACA                CTTCG ACC CGCAG                CCCGTCCGCTTTGGC  45 44
LOY33_RS25200 5525184 .. 5525196 - -10.5  -2.90075   GGCCGCGCAAGTATA                GCGGG AAC CCCGC                CTCACCGAAACAACC  64 100
LOY33_RS25195 5524650 .. 5524680 - -13.3  -3.87815   GGCCAGCGTCAGAAA       CGACAAAGCCCGC ACGTG GCGGGCCTTGTAG       CTGCAGCGTCGGGCT  93 40
LOY33_RS25190 5522653 .. 5522694 -   -18  -3.14132   CCGCTTCGCCAGCAA GGCTGGCTCCTACAGGTG CTCCAC CGCCTGCAGGAGCCGGCC  TTGCCGGCGAAAGCG  91 43
LOY33_RS25175 5517988 .. 5518013 -  -4.6  -3.28924   CAGGTTTCTGTACAA         CCTTGAGGGC CTGTTC GCCGGCAAGG          CCGGCTCCTACCCTG  49 65
LOY33_RS25165 NONE
LOY33_RS25160 5513315 .. 5513369 - -29.4  -3.08679   TGGGCTGATTTAACA GCTTCGCCGGCAAGGTCGGCTCCTAC ACT GCAGGAGCCGGTCTTGCCGGCGAAGG GGCCCTCAATGCCCC 100 31
LOY33_RS25145 5509211 .. 5509269 - -11.3  -2.75481   TTGGAACGGGAAGTA CCCTTCACCGGCAAGGCCGGCCCCTACACG GTTG CG-GTAGGAGCCGGCCTTGCCGGCGA---- AGGGGCCGACGCGGT  66 43
LOY33_RS25140 5507723 .. 5507745 -  -2.7   -2.7314   GGCTAAACGACACTA           CCGATTGGA TCCAG TCCAATTGA           AAAAATCGCGGGTGT  39 168
LOY33_RS25135 NONE
LOY33_RS25130 5503831 .. 5503844 -  -5.9  -3.26471   TGAGCGCTACAGCAA               CGCGC TCAA GCGCA                GCTGCGACGCCTGCG  51 3
        glnK NONE
LOY33_RS25100 5497391 .. 5497408 - -12.7  -5.47821   ATCCAGGCAAAAAAA             TGCCCGG CAAG CCGGGCA              TGTTTTTTCGAGCAT 100 42
LOY33_RS25095 5496596 .. 5496614 - -11.6  -5.28176   GCCACCCACAAAAAA             GCCCGCAG CGA CGGCGGGC             TCTTCTGTTCGACGG 100 47
        cyaY NONE
LOY33_RS25055 5491054 .. 5491082 - -15.4  -3.85698   GCTGGGCGTTATAAA       GCAAAACCCCGCC CAAG GGCGGGGTTT-GC        ATGTTTTTCGGCCAG 100 101
         rnk 5490106 .. 5490120 -  -7.1  -2.83715   CCTACCACGACGACA               GCAGC CTGTT GCTGC               CGCTGCAGCGCTTCC  50 490
LOY33_RS25030 5485741 .. 5485754 -  -4.5  -3.78329   GGCGATCAAGCCAAA               GCACG CGAT CATGC                GCGAAGCCGCGCTGC  58 379
LOY33_RS25015 5483522 .. 5483538 -  -4.3  -3.40403   TGCGCGGGATGATAA              CAGCTCA ATC CGGGCTG              CTAGCAGATCTATGT  49 89
        hemC NONE
LOY33_RS25005 NONE
LOY33_RS25000 NONE
LOY33_RS24995 5479329 .. 5479359 - -19.2  -3.43853   GCAACCAGCCAAACA       GTACGGGTTTAACC TGG GGCTAAACCCGTAC       GACGTCAGGCCCGGA 100 30
LOY33_RS24990 NONE
LOY33_RS24985 5477432 .. 5477454 -  -6.9  -3.65046   GGCCTACGCGAACAA           GCCCCTGGC AATCA GCCAGGCAC           GGCGCGAAGCGATTC  61 500
LOY33_RS24975 5476059 .. 5476074 -    -9  -2.52516   TGGCGGATCAGGAAG              CAGTCG AGGG CGACTG               AGTCACTGGGGTCGT  57 2
LOY33_RS24965 NONE
LOY33_RS24960 NONE
LOY33_RS24955 5472220 .. 5472237 - -12.7  -4.21194   GCTGAGCATGCAAAA             GGCGACC TTCG GGTCGCC              TTTTTTATTGGGTGT  93 121
LOY33_RS24925 5466433 .. 5466478 -  -5.9  -3.07522   ACATCGTCGAAGACA CTCAGCGCAAGCTGGTCAGCA CCCC CGCCTACATGCTGGCGCAGAG CATCGGCGAGGCGGC  49 103
        hemB NONE
        ppk1 5461594 .. 5461645 - -10.1  -2.94293   GCTGGAACAGAACCA GCTGACCCAGGCC-G-ATTTCGGCC TGGA AGCCGAATGGCTGGCCCGGGTCGGC TTTACCCTCAGCGTA  64 33
        trxA 5459565 .. 5459583 -  -8.8  -4.65446   ACCAGACAGAGAAAA             GCCCCG ACGAATG CGGGGC             TTTTTTCGACTCAGA  86 36
         rho 5458070 .. 5458085 - -11.8  -4.86133   TACAGATAGCAAAAA              GCCGGG TTTC CCCGGC               TCTTGCGTACCGCCC 100 44
        ubiD NONE
LOY33_RS24880 5455387 .. 5455403 -  -6.5  -4.41348   CCCGCTGCAAACAAA              GCCCC CAGCACC GGGGC              TTTCAGGCCTGCTGT  74 166
LOY33_RS24875 5454581 .. 5454599 -    -3  -3.04144   CCCTGATTCCCAACA             CGTCCATT GAT AAGGGGCG             CGATGGTACCGCAGG  43 43
LOY33_RS24870 NONE
LOY33_RS24865 5453325 .. 5453356 - -13.7  -3.12351   CTGTGCGATAGCCAA      GCCCGCTCCCGCA CTGCCC TGTGGGAGCGGAC       TTGACCCGCGATAGA  79 51
LOY33_RS24855 5451318 .. 5451338 -    -4  -2.92613   CGGCACTGGAAATCA           TGCTGGCCA AGAT CGGC-AGCA            ACGCACTGGTGGTGG  43 463
LOY33_RS24830 5445958 .. 5445972 -    -7  -4.15788   AAGGCCTGGAAGAAA               CCCCTG CTG CTGGGG               CTGGCGCACGAATGC  67 144
LOY33_RS24805 NONE
        pepP NONE
        ubiH NONE
LOY33_RS24790 5440076 .. 5440104 -    -3  -2.75343   GGGAGAGGCGCAAAT        GGTAGTGAATGC CATTT GCCTTCTCAACC        GAACTGCCAAGGGAG  41 67
LOY33_RS24785 NONE
LOY33_RS24780 NONE
        gcvT NONE
        gcvH 5435597 .. 5435614 - -11.3  -3.36273   CTCTTCCAAGACCAA             GCCTCGA GGGG TCGAGGC              TTATTGAGTCTAGGA  73 67
        gcvP 5432640 .. 5432687 - -16.2  -2.79098   GTGACCGAGTAATCA CCTCGCCGGCAATGCCGGCTCC TACA GGAGCCAGCCTTGTCGGCCACG AGGCCCTGGCCTCAG  86 37
LOY33_RS24735 5427579 .. 5427598 - -10.6  -3.18737   CAACGACGACGAAGA            CGTGCGCC GCGC GGCGCCCG             AGCAGTTTGCCGAAG  64 457
        argE 5425304 .. 5425314 -  -4.6  -4.37734   GACAAGAACGGAAAA                 GCAC ACA GCGC                 TCGAAGGGTTATCGT  67 92
        argA 5423700 .. 5423715 -  -5.4  -3.44051   CTCCTACGAGCAGAA              CGAGCAG AGC CTGC-CG              AACAACCTGCGTGAT  53 269
LOY33_RS24710 5420550 .. 5420562 -  -2.6  -2.78384   CCGGGGTTTATCAGA                CCGC GAACA GCAG                GAACTCGCGTTCCCA  39 8
LOY33_RS24705 5419048 .. 5419061 -  -2.3  -3.64703   GCTGGGCGACTGAAA               CAGTC GCTA GTCTG                GCAAGATCCACGGCG  51 102
LOY33_RS24700 5417750 .. 5417766 -  -2.1  -2.87132   GTCGTTTGGCAGATA              CGCCTGC GGT ACCGGCA              AACCGGCGCGCAACT  40 130
LOY33_RS24695 NONE
        potA 5415388 .. 5415405 -  -2.5  -3.58037   TATCAATCGCTGAAA             CGCTCGC TTGA GCTTGCG              CGCTGTCATGACCGC  47 31
LOY33_RS24685 NONE
LOY33_RS24680 5413367 .. 5413383 -  -9.4  -2.52516   GCGCTGAGCATCAAC              CCGCTC GGGCA GAGCGG              CGTGGTGTTCGACAG  54 246
LOY33_RS24670 5410213 .. 5410228 -  -3.2  -4.08216   CTACGTGGTGCAAAA              GCC-CGG TAC CCACGGC              CAACTGCCCGCCACC  59 277
LOY33_RS24660 5408439 .. 5408449 -  -2.4  -3.62046   CCAGTTGGCCAAGAA                 TGCC AAG GGCC                 TGCCCAAGATCGAGG  48 409
LOY33_RS24650 NONE
LOY33_RS24645 5406706 .. 5406737 -    -8  -3.85698   CCGGCCTTCGAGAAA      GCCTTGA-ACGCCGC CCT GCAGCGCATCAAGGA      CAACGGGCGCATGAC  66 134
LOY33_RS24625 NONE
LOY33_RS24620 5402011 .. 5402037 - -18.1   -4.0896   AAAGGCCGGGGAAAA         GGTGGCAGTCG GCTAT CGACTGCCACC         CGGGGCAGGTCAGCG 100 35
LOY33_RS24615 NONE
LOY33_RS24610 5399775 .. 5399796 -  -5.9  -3.57144   CGGTGGAGCTGGAAA           CCCA-GATCA ACG CGATCGTGGG           CGTGGTGACCAACGG  56 201
        ilvA NONE
LOY33_RS24595 5396986 .. 5397011 -  -7.5  -3.92522   GCCGAAGCCGAGAAA         CGC-GGCTGGCC GGT GATCAGCCTGCG         CGATTGAGGTGTGAC  66 107
LOY33_RS24585 NONE
        ptsP 5393096 .. 5393106 -  -2.4  -3.01712   GGCTGCGCTCGAAGA                 CCAG CTG CAGG                 ACCCGCGACCACAGC  41 359
LOY33_RS24570 NONE
         lgt NONE
LOY33_RS24560 5389778 .. 5389823 - -21.4  -3.14132   CCCTTTCGCCAGCAA GGCTGGCTCCTACAGGGGATC GCGGT GATCCT-TGTAGGAGCCAGCC TTGCTGTCGAAGCGG 100 51
LOY33_RS24550 NONE
LOY33_RS24545 NONE
LOY33_RS24540 NONE
LOY33_RS24535 NONE
LOY33_RS24530 NONE
LOY33_RS24525 5380631 .. 5380644 -  -5.9  -3.14564   GGAGGCGCTGAGCAA               GGCGC GGGC GCACC                CGCAGTGGTCGTCGA  51 190
LOY33_RS24510 5377368 .. 5377417 -  -5.7  -2.55351   GGCTCCTACAGCAAT CGTGTAGGAGCCGGCCTTGCCG GCGAATG CATCAACGCCG-CTCCCACACC TCGAAGTGATAAGCC  45 7
LOY33_RS24490 5370153 .. 5370171 - -11.7   -4.4078   TGCTTGGAATGAAAA             TCCCGGC CAGGT GCCGGGA             TTTTTTTTGCCTGTA  93 85
LOY33_RS24475 NONE
        mutM 5366152 .. 5366178 -  -2.8  -4.18018   CGCCCGCATCGAAAA         CCGCGCCCGC GTGCACT GCGGGCGTTA         ATGCGGCACAATTGT  60 351
LOY33_RS24450 NONE
LOY33_RS24445 5362138 .. 5362149 -  -2.2  -3.04715   TATCTGGGTGAAAAC                CGTA CGCC CACG                 CTGATCATCCATGCC  41 218
        ftsY NONE
        ftsE NONE
        ftsX 5354200 .. 5354210 -  -3.2   -2.7535   GGCTGGAAGACACTA                 TCGC GGT GCAA                 GCTCACGCAGATGCC  41 12
        rpoH 5352709 .. 5352736 -  -9.8     -2.89   ACTGGCACACAACGA        GCGTGGCGGCACG CTT CGCGGCGCCA-GC        ACACTGAGTCAGCAG  62 520
LOY33_RS24395 NONE
        thiS NONE
LOY33_RS24385 NONE
        trmB 5349581 .. 5349602 -  -3.7  -2.53263   TGCAGGTCGAACCGA           CGCGGCTG GTGGCGA CA-CCGCG           GGGCCAGCTGTTTCT  40 518
LOY33_RS24330 5341983 .. 5341995 -  -7.7  -2.90194   ACGCCTTCAACGACA                TCGAC GAG GTCGA                CCTGCCGCGTACCTC  52 305
LOY33_RS24320 5340647 .. 5340666 -    -7  -4.36914   CCGTGCCGGAGAAAA            CCCCGCCG GTAC CGGCGCAG             CCACCGGTGACCCCG  75 420
        rpmE NONE
LOY33_RS24295 5334915 .. 5334926 -  -3.6  -3.18452   ACGACTTTAAGCCAA                GAGC CGCA GCCC                 GCAAGGCTTTCAGTG  47 80
LOY33_RS24290 5333481 .. 5333504 -   -16  -5.27938   AGCCCCAAACAAAAA          GCCCCGACTC TCGC GAGCCGGGGC           TTTTTGCTACAACGC 100 50
        pilM NONE
LOY33_RS24275 NONE
LOY33_RS24270 5328495 .. 5328515 -  -8.3  -2.90212   TCAGTACCGCACACA            GGCTGAACA TCC TGTTCATCC            ACGACCTCCCTGGTC  56 39
        pilQ NONE
        aroK 5326630 .. 5326658 -  -4.5  -4.63048   CCCACAAAGAACAAA       GGCGCGGCATCG AAGACA CGAC-CCGCGCA        ATAACGAAGTGCCCT  72 77
        aroB NONE
LOY33_RS24250 5323816 .. 5323840 - -17.9  -4.52589   GTCTGGGACAGAAAA          GCCTGCCGCGT GTT ACGCAGCAGGC          TAGACCGGGGTTCAG 100 85
        gltB NONE
LOY33_RS24240 5317569 .. 5317627 - -27.6  -4.20531   TAGATTTAGTTAAAA GCTTCGCCGGCAAGGCCGGCTCCTAC AGGTTTG GCAGGAGCCAGCCTTGCTGGCGAAGA GGCCCGATCAGACCT 100 33
        hemE 5316347 .. 5316378 -   -18  -2.75081   GAGCGTGAAAAGTCA      GTGGCGGG-GCCGCG ATA CGCGGCACCCGCCAG      GCAGTTGCCCGTTAC  89 37
LOY33_RS24230 NONE
LOY33_RS24225 5315216 .. 5315229 -  -3.7  -3.16564   GTTGCACCTGAGCAA               GCTGC CGGC GCTGC                CGGGGAATGTGAAGG  45 103
LOY33_RS24215 5312886 .. 5312900 -  -4.2  -3.08679   CTTTCTGATTGAACA               CCACGC GCC GCATGA               ACAGACCTCCATGTG  45 90
LOY33_RS24210 5311936 .. 5311946 -  -8.2  -3.01712   CCCGGTCTTCGAACA                 GGCC GCC GGCC                 AACTGGCCGGACGCT  55 207
LOY33_RS24200 5311004 .. 5311044 - -10.5  -3.14931   CCGATTCGCCAGCAA  TGCTGGCTCCTACAG GTTAGCGCCGT CCGTAGGAGCCAGCC  TTGCTGGCGAAAAGA  66 43
        betT 5297729 .. 5297752 - -19.6  -5.86061   CGCCAGCAAAAAAAA          GGCCCTGCCG TCAC CGGCAGGGCC           CTTCTTCATTCAGCT 100 49
LOY33_RS24160 5296992 .. 5297006 -  -4.3   -5.1287   TTTAGAGCCAAAAAA               CACTT CATTT AAGTG               CAACTTTATTTATCG  81 44
LOY33_RS24155 5296108 .. 5296125 -  -2.7  -3.63744   CCGCCTCCGAAAACA             CTGCTTC CATA AAAACAG              AGCTTATACACAAGA  51 69
LOY33_RS24135 5290944 .. 5290962 -   -16  -3.64915   GCCCAGAAACGACAA             CGCGCGGT GTC ACCGCGCG             TGCTGGAAGGGGTGG 100 126
LOY33_RS24130 5289418 .. 5289428 -  -6.8  -3.36327   CCAGGCGATCGACAA                 GCAG TTG CTGC                 CGGCGCTGGCGAACC  56 163
LOY33_RS24100 NONE
LOY33_RS24095 NONE
        dgcA 5281735 .. 5281752 -  -7.7  -3.00731   TGAACGATCAGAAAT             CCTTGCA CAGG CGCAAGG              CGTCGTAGATCGCCG  56 0
        dgcB NONE
LOY33_RS24080 5278408 .. 5278424 -  -2.1  -3.15544   CTTGATGTTCATGAA              TGCCCCC TCA GGCCGCA              TCGCGCCGGGCGCCG  41 16
LOY33_RS24075 5277547 .. 5277582 - -16.3  -3.66018   TCACTATTTGAACAA    TAGCCTGCAGGCCACG GTTGA CGTGGCCTGCA-GCCA    TAGGCAAACACTTTA 100 77
        gbcB 5273815 .. 5273857 - -16.2  -2.64803   GGACCGCGAAACGCA GATCTTCACCCCCGGCAGCG AGC CGCCGCCGGTGGTGGACACC CACCTGGGGCGCATC  77 442
LOY33_RS24045 NONE
LOY33_RS24040 5269199 .. 5269212 -  -4.5  -3.57462   CACGCGAGGGGGAAA               TCAGC TGTT GCCGA                TTGTCCGGGCAATGA  53 12
LOY33_RS24035 5266735 .. 5266770 -  -7.7  -3.01712   GGGGTTGCTCGAAGA   CGGT--GCGTGGCTGCGC CAT GCGCAGC-ACGCCAACCA   CTGCGCGCAGTTGCT  53 357
LOY33_RS24025 5264555 .. 5264565 -  -6.8  -2.74461   CACTCAGCGGTAAAC                 CGGA AAA TCCG                 CACACAGTGCCGACA  51 3
LOY33_RS24020 5263263 .. 5263275 -  -3.3  -3.06583   AGAAGATGTGCAACA                TGGAG TGT CTCCT                GTTAGTGGGCGACAG  43 27
LOY33_RS24015 NONE
LOY33_RS24010 5259903 .. 5259918 -  -6.8  -3.14132   TCGCTTCGCCAGCAA              GGCTGC TCCT GCAACC               ATCAGATGTTCTGCC  54 27
LOY33_RS24005 NONE
        purU NONE
        fdhA 5256802 .. 5256816 -  -2.1   -2.7263   ATTACCGTCCTAAAC               GTAGT GAAAA ACCAC               CGTCAACAGTTGGCC  39 188
LOY33_RS23990 5254340 .. 5254375 - -11.3  -3.53012   GCCTTGCCGGCGAAA   GCAG-CACCGCGATATC CAGG GATA-CGCGGTGGCCGC    TTTCGCCAGCAAGGC  74 79
LOY33_RS23985 5253672 .. 5253699 -  -7.6  -3.53012   CCCCGCCTCGGCAAA        CCGCCG-GCTTAC ACC GAAGGCACGGCGG        CCGGGGTGCCCCAGA  62 6
LOY33_RS23980 NONE
LOY33_RS23975 NONE
LOY33_RS23970 5251266 .. 5251317 -  -8.6  -2.86271   GTGGCACGACAAGGA CGCGCGCATCGAGCAACTGCGCCAG GAG CTG-CGCCGCTAGCCGATGATCGCG TGGGGCACGAAGCGG  58 10
LOY33_RS23960 NONE
        creB 5248895 .. 5248916 -  -5.8  -2.50988   GTACACCAGGAAGAT           GCGGATGC CCAGGC GCATCAGC            TGTGCCCGGGGCTGT  45 21
        creC NONE
        creD 5245618 .. 5245648 -  -8.9  -3.65812   GCGCCCTGAAGAGAA       GCGCTGGACGCCG TGGGT CGACGCCCAGCAG       GACAAGATCCGGCGC  65 427
        glnE NONE
        waaF 5232657 .. 5232678 -  -4.4  -3.17723   GTACCCGCAACTTAA           TCGACCTC GACCGT GACGTCGA            CCAGCGACGGACCGT  49 0
        waaC NONE
LOY33_RS23900 NONE
        rfaP NONE
LOY33_RS23890 NONE
LOY33_RS23885 NONE
LOY33_RS23880 5226247 .. 5226257 -  -4.6  -3.14132   TGCGGTGTTCATGAA                 GGGC AGC ACCC                 ACCTGACCGCTCACC  47 509
LOY33_RS23840 5217467 .. 5217477 -  -6.8  -3.82191   CGAACTGGACAACAA                 TGCC CAG GGCA                 TTCTTGGCTATGTAG  64 451
LOY33_RS23830 5214450 .. 5214464 -    -7  -2.72344   GCTGATCCGCAAGCA               GGCGCC AGT GGCGGC               GTTGCCGGGACTGGT  48 405
        bioB NONE
        bioF NONE
LOY33_RS23795 NONE
        bioC NONE
        bioD 5206606 .. 5206616 -  -6.8  -2.75832   GTCAAAAACACTAAT                 GGCA CAG TGCC                 CTTCAATAGACTCAG  51 42
LOY33_RS23780 5206143 .. 5206168 - -12.5  -3.42699   ACGCAGGCACGACAA         GGCGCCC-GGCC TTG GGCCAGGGCGTC         GAGTCAGTATGTAGG  79 74
LOY33_RS23775 5204103 .. 5204120 -  -9.8  -5.60993   TGGCGCATAAAAAAA             CCCGCC GGTAAG GGCGGG              CTTTCTTGCTTCAGG 100 48
LOY33_RS23770 NONE
LOY33_RS23765 5200553 .. 5200568 - -11.8  -5.07652   CCGGGCAAAAGAAAA              CCCCGC CGAA GCGGGG               TTTTGCAGACTGTTT 100 217
LOY33_RS23755 NONE
LOY33_RS23750 5197459 .. 5197490 - -15.8  -5.60993   TCCCCCATAAAAAAA      CGCCCCAGGCCAAA AGGA TCAGGCCCGGGGCG       ATGCGCAGGAACGCG 100 76
LOY33_RS23745 NONE
LOY33_RS23685 5184575 .. 5184591 - -15.1    -3.727   CCCACCATACTCAAA              GCCGCGC ATT GCGCGGC              TTTTGCGTTTCCGGC  95 57
LOY33_RS23680 NONE
        prfH 5182282 .. 5182298 - -15.1    -3.727   CCCACCATACTCAAA              GCCGCGC ATT GCGCGGC              TTTTGCGTTTTTGGC  95 183
LOY33_RS23660 NONE
LOY33_RS23655 NONE
LOY33_RS23650 5175940 .. 5175972 -    -4  -4.21768   TAATTAATGCCAAAA      GCTGCCCCCTCAGC AGAGA GCTTCAGGAGCAAC      TCTCAAAGTTCTTAT  62 37
        tsaD 5162418 .. 5162447 -  -9.4  -2.70932   GGTCGGCCTCAACGA      GCAGCAGCAGGCCT GGAT AGGCCTG-TGC-GC       GGTGGTCGGCCACCT  55 362
        folB NONE
        folK 5160898 .. 5160919 -  -7.9  -2.82516   TGGGCGAGTACCATA           CCCATGGCC ACCG GGCCCTGGA            GCTGAAGGCATCGAC  52 366
LOY33_RS23535 NONE
LOY33_RS23530 NONE
LOY33_RS23525 5144133 .. 5144146 -  -5.9  -4.40173   AGCAGAAACCGAAAA               CAGCG AAAG CGCCG                AAGCGCCCGCCAGTA  73 486
LOY33_RS23515 NONE
LOY33_RS23510 5140390 .. 5140431 -  -9.4  -2.52464   TTCGCTGGCAAGCCA GCCCCCACAAGGTTTGTCG GTACA CGCCGAACCT-GTGGCGGC TGGCTTGCCAGCGAA  59 71
LOY33_RS23505 NONE
LOY33_RS23500 5137971 .. 5137997 - -16.6  -3.92832   AAATCTTGGAAACAA         GAGGCGTCAGCA CGA TGCCGACGCCCC         ATTGGCACGGCTTAC 100 37
LOY33_RS23495 NONE
LOY33_RS23490 5135748 .. 5135764 -  -6.5  -3.65902   TGTACCTCAGGCAAA              CCGTCAG GGG CTGACTG              GCATCAAGCCTGGAT  61 118
         rpe NONE
LOY33_RS23480 5134181 .. 5134202 -  -2.8  -3.70902   GGTCGTACAGGCAAA           CGCGCCGG ATCAGG CCGGCCAG            AAAAAAGTCAGGCGC  52 33
        trpE NONE
LOY33_RS23470 NONE
        trpD NONE
        trpC 5130081 .. 5130095 - -12.8  -5.36441   TGTCGATACAAAAAA               GCCGGC AAC GCCGGC               TTCAGTGTGGATCAG 100 37
LOY33_RS23455 5129326 .. 5129338 -  -7.7  -3.28497   GCATGTCAAAGGCAA                GACCA TGG TGGTC                TTCGGCACCCGTTAA  59 37
LOY33_RS23445 5128026 .. 5128071 - -13.3  -3.14132   GCGCTTCGCCAGCAA GGCTGGCTCCTACAAG-GGAAG CGG CATCCGCCTGTAGGAGCCGGCG TTACCGGCGAATGGC  79 51
        argC 5121489 .. 5121502 -  -9.5  -3.41878   GGCCGCAAGCGACAA               GCGGC AAAT GCCGC                CCTATGCCCGCTTGC  67 58
        erpA 5120988 .. 5121007 - -16.4  -4.39568   ACGCACACAGCAAAA            CGCCGCGC AGAG GCGCGGCG             TCAGCAGTACTGCCT 100 46
        tyrS 5117032 .. 5117049 - -14.1  -3.32022   TTCTCTATATAGGAA             GGGCGGC TTAC GCCGCCC              TCTCTTTATTCAGCC  86 31
LOY33_RS23375 5114883 .. 5114893 -  -5.4  -3.20432   ACAGACCCAATCGAA                 GGTT GCT AACC                 TAATCGTCTTCTTCA  51 92
LOY33_RS23370 NONE
LOY33_RS23365 5114653 .. 5114693 - -10.7  -3.88559   AACGATTCTGATAAA  GTTCAGAAATCAATATTCG ATG CGAATATTCATTTCTAAGC  TTTGACAAACTAGCA  77 48
LOY33_RS23360 5111467 .. 5111480 -  -5.3  -4.15222   ATGGTCGTCAAGAAA               TTCTG TTGC CAGAA                GGTCTTGTTCAGACA  66 147
         rrf 5111304 .. 5111339 - -19.2  -4.85599   TTCAGCCCACAAAAA    CAAAACCCCTACCTGC AGAT GCAGATAGGGGTTTCG     GAATTTAATCTTGAC 100 34
        birA NONE
LOY33_RS23345 NONE
LOY33_RS23340 5108994 .. 5109037 -  -8.8  -3.31461   TAGCTACTTTGACAA CTGCTTCACTGCG-TTACCAC CTA GTGGTCATCGCTGTGGAGCGG GCGCCATTCTATGCA  63 43
LOY33_RS23335 5108799 .. 5108824 -  -2.5  -3.04415   TACCACTAAACTATA         CCCGCG-GAGCT TGC AGCTCTCGCTAA         ACTGGTGGAGGGAGA  41 28
LOY33_RS23330 5108728 .. 5108738 -  -2.4  -4.01135   TGCAACAACAGCAAA                 CCTG GAG CGGG                 TAGCGGGAATCGAAC  56 16
LOY33_RS23325 5108598 .. 5108619 - -11.7  -4.73614   GACCATTAAAACAAA           GGCAGATAT TTTC ATATCTGCC            TTGTCATATGGAGCT 100 34
         tuf 5107300 .. 5107336 -  -3.7  -4.19817   GCTACTGACCTAAAA   GCT-TATCAGGCCGAC CATTAT GCCGGCCTGATCGAGA    GAAATCAACTACTTA  62 38
LOY33_RS23315 5107199 .. 5107223 - -10.7  -4.64861   TCCTGTGAAAAGAAA          GCCAGACACAC AAG GTGAATCTGGC          AGGTCAGGAGGGAAT  90 22
        secE NONE
        nusG 5106219 .. 5106243 - -17.1   -4.4767   CCAGTGACGACAAAA          CCCCGCAGCAC ATA GGGCTGCGGGG          TATGGGATGCGTCGT 100 45
        rplK NONE
        rplA NONE
        rplJ NONE
        rplL 5103803 .. 5103826 -   -16   -4.8143   CCAATAACGGAAAAA          GGCCGGTGGC AAAA GCCACCAGCC           ATCAGCCTTTCGCTT 100 71
        rpoB NONE
        rpoC 5095165 .. 5095185 -  -9.7  -4.78029   GCAAGAAAAGCAAAA            TGGCAGGAC GAA GTCCCACCA            AATTTAGGGGTACAA  93 155
        rpsL 5094733 .. 5094751 -  -5.9  -3.56594   GCAAATTGCTGCAAA             CGGCCGA TTACT TCGGACG             CTTGGTACCGTACTT  55 14
        rpsG NONE
        fusA 5091963 .. 5091976 -  -3.1  -3.60475   AACTCCTAGCCTAAA               GGACTG AAT CAG-CC               TTGTTTTTTAACGAG  49 20
         tuf 5090701 .. 5090734 - -18.3  -3.17723   TGAGTGTCAACCCAA     TAAAAAAGCCCCCGC AAAA GCGGGGGCCTTTCTA      AACGATCAACGATTA 100 38
        rpsJ 5090278 .. 5090295 -  -8.5  -2.63301   CAGAGCGTTACACGA             CTAAGAC CCGA GTCTTAG              CCGAGGCTGATCTGC  57 22
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 5083915 .. 5083944 - -20.9  -3.91858   GACACATCCCAGAAA       CGAAACAAGCCCC ATAA GGGGCTTGTTTCG        TTGCAAGATCACCGG 100 87
        rpsH NONE
        rplF NONE
        rplR 5082501 .. 5082512 -  -2.2  -2.63257   ATTTGACATAACTTA                GAAC TCCA GTCC                 GCCTTCACGAGCACC  38 11
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 5079853 .. 5079885 - -12.9  -4.38748   TGTAGAAACAAATAA     TC-AACCCAGCAGC GCACTA GCTGCTGGGTTTGA      AGCACAGATCACACT  93 40
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA NONE
        rplQ 5076855 .. 5076885 - -14.1  -3.93583   CAATTCATGCAGAAA       CAAAAAACCGGGC ACTGG GCCCGGTTCCTTG       TTACAGACTGTTCGC 100 42
LOY33_RS23110 5075241 .. 5075258 -  -9.8  -4.67011   AATTGCATTGAAAAA             CCGCCC AGATGA GGGCGG              TTCTTCTTATCACTT  87 45
         bfr 5074614 .. 5074638 - -17.2  -5.60993   GCGGGCACAAAAAAA          GGCCATCGGG TACGC CCCGATGGCC          TTTTTCGTTGCGCGG 100 45
LOY33_RS23095 NONE
LOY33_RS23090 5069622 .. 5069644 - -19.2   -4.3208   CCCCAGAACGCAAAA           CGCCCGATGC AGT GCATCGGGCG           TTTGTCTTGAAGCGC 100 56
        fdnG NONE
        fdxH NONE
LOY33_RS23070 NONE
        fdhE 5063061 .. 5063080 -  -3.4  -3.42315   AGGACATGCAAAAAC            GCTCCGGC CTAT GTAGGAGC             CGGCCTTGCCGGCGA  47 100
        selA NONE
        selB NONE
LOY33_RS23050 5059340 .. 5059354 -  -4.2  -3.05844   CGGCCCATCGGAAGA               TGCAGC ATT GATGCA               GGCGTTGCAGGAGGC  44 287
LOY33_RS23035 5055664 .. 5055674 -  -2.4  -3.65224   ACGCCAGGTGAACAA                 GCTG GTG CTGC                 TGTGCCCGGCGGTCT  51 445
LOY33_RS23025 NONE
LOY33_RS23020 5053032 .. 5053064 - -25.1  -4.57073   TATGGCCCTGAAAAA      CAAAACGCCCGATGC GGT GCATCGGGCGTTTTG      AGGCCTATCGGCCTA 100 139
LOY33_RS22985 5046912 .. 5046922 -  -4.6  -3.68988   GCTGACCGAAGACAA                 CAGC AAT GCCG                 CGGCACTGATCCTGT  55 515
        nrdR NONE
        ribD 5043591 .. 5043613 -  -6.8  -3.28791   AGTCCTCCTTCAGAA           CGGGTCGCGC AAG GCGCAGGCCG           CGAATTATACGCCGG  56 30
LOY33_RS22955 NONE
       ribBA 5041735 .. 5041758 - -12.4  -2.62613   TCTCATCTTAAAGAG          CCAGGCCGCA ACGG TGCGGCCTGT           GGGAGTTTTGTTCCG  69 69
        ribE NONE
        nusB 5040741 .. 5040752 -  -3.6  -2.71364   GCAGCGCCGCAATCA                GCGC TTGA ACGC                 CTTCACTTCGGCTTC  43 11
        thiL NONE
LOY33_RS22930 NONE
LOY33_RS22925 5038370 .. 5038386 -  -2.1  -2.94561   CGGCAACAAAGACGA              CGGGCAC CTT GTGCTCC              TGATCAATAACGTGA  40 84
        ribA NONE
LOY33_RS22915 5036809 .. 5036848 - -14.9  -3.31144   CGGGCACCTGTACAA  CGGCCCTGCCGCCGTGCG CTACC CGCGTGGCAGC-GGGCCG  AACGCGACGATCGAC  78 520
LOY33_RS22895 NONE
LOY33_RS22890 NONE
LOY33_RS22885 5029859 .. 5029900 -  -8.7  -3.14132   GGCTTTCGCCAGCAA GGCTGGCTCCTGCAG AGTGGGGATAAA CGGCAGGAGTCAGCC  TTGCTGACGAAGAAC  60 204
LOY33_RS22870 NONE
LOY33_RS22865 5024058 .. 5024068 -  -4.6  -3.01924   CACGGCCGGCGAAGA                 GGCC ATC AGCC                 TTTCACACACACCAC  47 20
LOY33_RS22860 NONE
LOY33_RS22855 NONE
LOY33_RS22850 5021480 .. 5021505 -  -4.6  -2.89797   CCTGCAGAAACACCA         CGGCCACCGC TACGAC GCGCTGACCA          TCACCTGCTACACCG  46 317
LOY33_RS22840 5019918 .. 5019938 -  -2.5  -5.13344   ATATCAATATAAAAA            GTAATGGCA TCA TGCCATGAT            CCGACGCCAGGTTCT  77 39
LOY33_RS22835 NONE
LOY33_RS22830 5017875 .. 5017886 -  -4.4  -3.25015   GCGAATGATTATCAA                CTGA AATA TCAG                 GCCTGCTCCTGCGCC  49 51
LOY33_RS22825 NONE
LOY33_RS22820 NONE
LOY33_RS22815 NONE
LOY33_RS22810 5012197 .. 5012208 -  -2.2  -3.38812   GCCTCTCCAATAACA                CCAT TGCA ACGG                 TCATCCGGCCGCAGC  46 97
LOY33_RS22805 5011298 .. 5011335 -  -8.3  -3.61715   CACCTCCTGGAACAA   CCGCTTTGCCTGGCCAC TCAA GCAGGCTGGCAAAGAGG    TGTTCTGGCCCGAGC  62 313
LOY33_RS22795 5009248 .. 5009268 -  -3.1  -3.28984   GAACTGAACGAGCAA            GGCGCCGTG GCC CACACCGGC            ATCGACCGCACCGAG  46 274
LOY33_RS22760 NONE
LOY33_RS22755 5002582 .. 5002596 -  -4.2  -2.91276   TGTCTTGGCAGAAAT               CCGC TGTCATC GCGG               CTCCTGTCATTGACG  44 93
LOY33_RS22750 4999971 .. 4999991 -  -4.5  -3.97368   CTGCGAACTGATAAA            GCGCCGGCC ACA AGCCGGCTT            TTTAATGCCTAGAAA  62 155
LOY33_RS22730 4996412 .. 4996425 -  -2.4  -3.85698   GGGGGGCTTGAGAAA               GCAA CTGTAC TTGC                CTCGAGCTCCGGATC  54 249
LOY33_RS22670 NONE
         mpl NONE
        ubiX NONE
LOY33_RS22655 4978938 .. 4978952 -  -8.5  -3.54543   AGGCAGGTTCGGAAA               CGGCG TTTCG CGCCG               TCGACCTGGACATGG  62 493
LOY33_RS22635 NONE
LOY33_RS22630 NONE
LOY33_RS22625 4974192 .. 4974204 -  -3.3  -2.62616   TGACCTCCTACAGCA                TGCCC AGT GGCCA                CAGTTCGGCGTCATT  39 372
LOY33_RS22610 NONE
        nadD NONE
        rsfS NONE
        rlmH NONE
        mrdA NONE
        rodA NONE
        mltB NONE
LOY33_RS22575 4964287 .. 4964307 -  -5.4   -3.9712   CGACTGCATGACAAA            CCGATCAG TCCCC CCGATCAG            TCTGCCGTGACGACT  64 22
LOY33_RS22570 4962967 .. 4962992 - -13.3   -3.9461   CCGTGGCAACAACAA         TGCCCCCGC GTGAGTGT GCGGGGGCA          TGGCAGGTCACGATA  95 41
LOY33_RS22565 NONE
        lipB NONE
        lipA 4960930 .. 4960959 - -23.7  -5.14163   AGCCATCAACAAAAA       GGCCCCCGTACCA TCGC TGGTACGGGGGCC        TTTTTTCAGCCAGTC 100 50
LOY33_RS22525 4954164 .. 4954194 - -22.6  -4.13648   AAGGCTACAGACAAA       CGGCGCCTGGCAAC AAT GCCGCCAGGCGCCG       ATCAATGGGAATCAT 100 93
LOY33_RS22520 4953168 .. 4953178 -  -6.8  -3.71848   CCGCGCCACCAACAA                 CGGT GTC ACCG                 GCCTGATCGACCCGT  61 213
LOY33_RS22490 4947178 .. 4947204 -  -5.1  -3.61517   ACGCCTGCCGAAGAA        CT-GCAACAGGC CCTG GCCAGCTGCCAG         CAGGCCGCGCAGTCC  54 424
LOY33_RS22465 4941829 .. 4941842 -  -2.3  -4.94992   TCAAAGTGACAAAAA               CGCCT AATC AGCCG                CGATTTGCCCCGATC  74 15
LOY33_RS22460 4940095 .. 4940115 -  -4.6  -3.53563   ATATCCGCCGGCAAA           GGCACGCAC GTTA GAGCG-GCC            AGTTCGGTGTGGCCC  53 15
         amn NONE
LOY33_RS22450 4937752 .. 4937778 -   -16  -2.76696   CGTTGTTCGAAGAAT         GGATGATGACCA TCC TGGTCACCATCC         TGATTGGTTTCATGG  75 174
LOY33_RS22435 4935701 .. 4935751 -  -5.9   -2.8511   GAGCAGATGATGACA CTGGTGTGCGCGGTGCCTGGCGTGC AGG GCGCGCATGAC-CTGCGCAC-CCGG GTGTCGGGCAACCGC  48 271
        hrpB 4931418 .. 4931461 - -10.8  -3.28712   CTCGGCCCCCGACAA CGCCCTGAGCCGCCTGCTGC AGCC GCAACAGGCGGTGCTGGCCA GCTACCTGCCGCTGC  66 514
LOY33_RS22405 NONE
LOY33_RS22400 NONE
LOY33_RS22395 4927735 .. 4927758 -  -8.8  -2.63631   CCAAGGTCGACATGA          GCCGGATCGG CTTG CCGATCCAGT           GCGTGATCGAGCTGC  52 288
LOY33_RS22380 NONE
LOY33_RS22375 4924208 .. 4924224 - -13.7  -3.53012   GCCTTGCCGGCGAAA              GGGCTGC AGC GCAGCCC              GTGCCCAATCAAGGC  83 34
LOY33_RS22360 4921030 .. 4921043 -  -3.7  -3.29144   CGACCTGCTGCACAA               GGCCG GTGA CGGGC                GCTGCTGGCCCGGCG  47 308
LOY33_RS22345 NONE
LOY33_RS22340 4918768 .. 4918778 -  -2.4  -3.51708   GATTCTCCAAAGCAA                 GGCC CAG GGCG                 CAAATAATACAGGGT  47 71
        tesB NONE
LOY33_RS22330 4917231 .. 4917253 -    -9  -3.05384   GGCGTTCTGATCGAA           GGCCTGGGTC GAT GATCCGGGCC           TCTTCGCCGGCAAGG  60 64
LOY33_RS22310 4912000 .. 4912034 - -25.2  -2.78384   TTTCCTCGTATCAGA     CACGACAAAGCCCGCC AGA AGCGGGCTTTGTCGTG     TCGGGGCGTGCCTCA 100 38
LOY33_RS22300 4911321 .. 4911351 -   -22  -2.89742   CTCAACCGCCAGACA       CGACAAAGCCCGCC AGA AGCGGGCTTTGTCG       TGGCGCGTATTCAGG 100 61
LOY33_RS22270 4903920 .. 4903936 -  -7.2  -3.28924   GAGCTCGGTGTACAA              CGGCCG CCTCT CGGCCA              AGCAGAAGAAAAAGT  54 421
LOY33_RS22255 4900938 .. 4900950 -  -7.7  -3.62597   TGCATGGGCGAAGAA                TGCAC AGG GTGCA                ACACGTACCAAGGCA  62 497
LOY33_RS22245 4899938 .. 4899948 -  -2.4  -3.36492   TCGTCAATGCCACAA                 CTCG GCG CGCG                 TCAAACCGAACCGGC  46 26
LOY33_RS22240 4899067 .. 4899082 -  -7.6  -3.84992   AATGCAACAATACAA              GGCATT CCTC AATGCC               CAACATCGTGAACTG  66 284
LOY33_RS22205 4891122 .. 4891133 -  -2.2  -3.90316   ATTCTGCGAAAAACA                GAGT ACTG ACCC                 GTACAAGCGAACTCG  53 65
LOY33_RS22200 4890508 .. 4890537 -  -3.4  -2.66602   CGATTGAATAAGTTA       GGGGCGAAGTCC TGACCT GGGCTTAGCACC        GCAGGGTGGCGTTGC  40 18
LOY33_RS22195 4889750 .. 4889777 - -10.6  -3.33815   AGGCGGCTGAATGAA        GGCATGGGATTC GCTG AAATCCCAAGCC         TTCGCTACCCGCTAG  69 79
        zorA NONE
LOY33_RS22185 NONE
LOY33_RS22180 NONE
LOY33_RS22175 4881439 .. 4881449 -  -4.6  -3.33911   AGGTAAACAATCCAA                 GCAG ACT CCGC                 TGGCGACACTGCGCT  51 177
LOY33_RS22170 NONE
LOY33_RS22165 NONE
LOY33_RS22160 4877280 .. 4877292 -  -4.1  -3.14564   CCACCCTTCTAGTAA                TAACG CGG CGTCA                CTCGTTAGCCCCCCA  45 23
LOY33_RS22155 4873843 .. 4873873 - -19.8  -2.93769   AAATAAGTCGAGACA       GGGCAGGGCTCGAT CCA ATCGAGTCCTGCCC       TGTCAATATTTAGAA 100 138
LOY33_RS22105 4863230 .. 4863272 - -22.2  -3.14564   CCACTTTGCCAGCAA GGCCGGCTCCTACAGG CCAAGCGAAAC CCTGTAGGAGCCGGCC TTGCCGGCGAAAGCC 100 52
LOY33_RS22095 NONE
LOY33_RS22090 4861772 .. 4861789 - -12.7  -5.10461   CGCAGGTAATAAAAA             GCCCGGA TCAT TCCGGGC              TTTTTCATGCGCGGC 100 44
         fur 4860669 .. 4860701 -   -15  -3.87373   TACAGCCCCCACAAA     GCA-CGAAGGCGACC CCAG GGTCGCCTTCAATGC      CGTGCAATTCAAAGC 100 48
        grpE NONE
        dnaK 4856054 .. 4856084 - -14.7  -2.89564   CGGGTATTCCAGACA      CGCCAACGCGGGAG CAAG CCCCCGCGC-GGCG       ACATCCTACCAGTCA  82 80
        dnaJ NONE
        dapB 4853789 .. 4853818 - -12.9  -5.02074   GCAGGTTGCAAAAAA       GCGGAATGACGTA TAGA CACGTCACCCCGC        TTTCTTCGTCGAATT 100 212
        carA 4852543 .. 4852597 - -10.8  -2.76696   GCTGTGTCGAACAAT CCACTCGAGG-AGCGCCTGAACGCGGC CTGT GCCG-GTTCAGG-GCTGCCTCCGGGGG TGCTCAGCGGCGCTT  63 29
        carB 4849271 .. 4849283 -  -3.4  -3.03124   GGGTATTTGGTAATA                CTCA TGCTT TGAG                TCCTGCATGCAGATC  43 14
        greA 4848764 .. 4848791 - -11.2  -2.62616   CCAGCTGCCAGATCA        CTGCCGACGCGGC AAA GCCGCGCGGGC-G        ATCAAATGTGACGGA  66 27
LOY33_RS22035 4848223 .. 4848243 -  -3.9  -2.78639   AAGACCGCGAAGAAC            GTGCCGC CGCCATT GCCGCAC            TGTGCAAGGCCGGTC  41 151
        rlmE 4847195 .. 4847210 -  -5.4  -2.67441   TAACTTACTACATTA              CCTACA TGTC TGCAGG               CGCCGTCTGTAACCC  46 138
        ftsH NONE
        folP NONE
        glmM 4842957 .. 4842986 -  -5.7  -3.07443   GCAGATGTTACCCAA       CCCGATCACCACT GGCA AGCGCTAATCAGG        CGCAAACTTCAGTTA  49 21
        tpiA NONE
        secG NONE
LOY33_RS21995 4841635 .. 4841650 - -11.8  -4.33417   TCCACCTACAAGAAA              GCCCGC TGTA GCGGGC               TGTCTTGTTTCAATT  93 40
LOY33_RS21990 4841463 .. 4841478 - -10.4  -5.11063   ATCAGCTAACAAAAA              GCCCCT GAAA AGGGGC               TCTGCTGAAACTGGT 100 37
        rimP NONE
        nusA NONE
        infB 4836728 .. 4836771 - -16.1  -3.91084   CTACCTGTAACTAAA GCGGCAAACGCCCGGCCAGGC TTGG GCCTGACCGGGCGTT-GC-GT TCAGAGCCGCCGACC 100 83
        rbfA NONE
        truB 4835251 .. 4835272 - -13.1   -2.6155   TTCTCCAATATCAAG           GGAAACCGT ACGC ACGGTTTCC            AATAGGCCAGGGACA  71 137
        rpsO 4834810 .. 4834867 - -19.7  -3.16774   CCAGATAAAACTAGA GGTTGGGAGCCTGCCCTGCCCTTGCGG TAAA CCGCGCGGGCGAGGCAGACAGCCAACC TCATAGATACGCGCG 100 119
         pnp 4832542 .. 4832567 - -17.7  -6.02546   TGAAAGCAAAAAAAA         TGCCCCGTATC CTGC GATACGGGGCA          TTGGCACTACCGGGC 100 63
LOY33_RS21945 4826694 .. 4826716 - -13.4  -4.87133   AGCGCTCAAAGAAAA           GCCCCGGC TGACTGC GCCGGGGC           TTTAGGGTTGGCCAC 100 89
LOY33_RS21870 NONE
        sfsA 4804951 .. 4804982 -  -8.7  -2.80816   CGGGGATGCATTACA      GGCCCTGGACTGCC GTGAA GACAG-CCAGGGCA      TCTGGCTCATTACGA  58 35
LOY33_RS21855 NONE
LOY33_RS21850 NONE
LOY33_RS21845 4801811 .. 4801823 -  -3.3  -3.45571   GGTGCCAAACAGCAA                CGTGC GAG GCATG                GGCGAGCTCCTAGCG  47 35
LOY33_RS21840 4800432 .. 4800442 -    -4  -4.63527   TCAGCATCTGAAAAA                 TCTT GGC AAGA                 CGTCGGCGCAGTGGC  73 506
        mrcB NONE
LOY33_RS21815 NONE
LOY33_RS21810 4794650 .. 4794668 -   -11  -5.38054   CTTCAGAAACAAAAA             GAGCCACA ATC TGCGGCTC             TTAGGGTGAAAATAG 100 47
LOY33_RS21805 NONE
        ilvN NONE
        ilvC 4790941 .. 4790956 - -11.8  -5.37593   GCCTAAACGAAAAAA              CGCGGC CGAA GCCGCG               TTTTCATCGCATCAG 100 48
        pssA 4789912 .. 4789957 -  -3.4   -4.1021   CTTGATAAGCATAAA GACTCCGTAG--AACCGGTG AGCTGATG CACCAGTAGACTACGGAGCC TTGGGGAAATTACAT  60 40
        msrP NONE
        msrQ 4787813 .. 4787827 -  -2.8  -2.52946   GGTTTTGAGAAAACC               CTAAAC TTG GCTCAG               CATTCTCAAATGACT  39 467
LOY33_RS21775 4786173 .. 4786183 -  -5.4  -3.20432   ACAGACCCAATCGAA                 GGTT GCT AACC                 TAATCGTCTTCTTCA  51 92
LOY33_RS21770 NONE
LOY33_RS21765 4785943 .. 4785983 - -10.7  -3.88559   AACGATTCTGATAAA  GTTCAGAAATCAATATTCG ATG CGAATATTCATTTCTAAGC  TTTGACAAACTAGCA  77 48
LOY33_RS21760 4782756 .. 4782769 -  -5.3  -4.15222   ATGGTCGTCAAGAAA               TTCTG TTGC CAGAA                GGTCTTGTTCAGACA  66 147
         rrf 4782593 .. 4782628 - -19.2  -3.54848   AACAGGCCACAAAGA    CAAAACCCCTACCTGC AGAT GCAGATAGGGGTTTCG     GAATTTAATCTTGAC 100 34
LOY33_RS21750 NONE
LOY33_RS21745 NONE
LOY33_RS21740 4778798 .. 4778813 - -10.4  -5.00884   ACGCTTGTTAAAAAA              CCGACC CTAG GGTCGG               TTTTTTATTGCCTGC 100 135
        murJ 4776687 .. 4776707 -  -7.5  -4.89567   GTCTAAAACACAAAA            CCGACGC CTGACCC GCGCCGG            CCATCAGTGCAGCGC  87 29
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB NONE
        ispH 4770721 .. 4770734 -  -9.5  -2.70932   GGTGGTGGGCAATCA               GCCGC TGGC GCGGC                AGGTGCATTTCAGCG  55 205
LOY33_RS21695 NONE
LOY33_RS21690 NONE
LOY33_RS21685 NONE
LOY33_RS21680 4768328 .. 4768355 -  -2.6  -3.73953   AGTACCCGTATGAAA        GACGTCAGTTAC CCCA GCAACCCCCGTC         CGCCTCGTTGCTGGC  51 2
        thiO 4766853 .. 4766872 -   -15  -4.86621   ACGGTGAATGAAAAA            GGGAGGCC TGAT GGCCTCCC             TTTTTTGTTGCCAGG 100 358
        rluD NONE
        pgeF 4763902 .. 4763917 -  -5.4  -2.87463   AACCTGCCTGAGATA              CCCCTA TAGA TAAGGG               TGATTGTGGAAGATT  48 65
        clpB 4761227 .. 4761245 - -14.6  -5.67283   AATGCAAAGAAAAAA             GGCCTCGA AAA TCGAGGCC             TTAGCGTAACCCGCC 100 47
LOY33_RS21645 NONE
LOY33_RS21640 4760791 .. 4760807 -  -5.1  -3.10409   TACCAACTGAGCTAA              CGACC CAAATAT GGTCG              GGGTAAGGGGATTCG  47 20
LOY33_RS21635 4760632 .. 4760649 -  -4.8  -5.75342   CCCCGGTAAAAAAAA             GACACC GATTAA GGTGCC              TTTTTTAATGGCTGG 100 97
LOY33_RS21630 4760511 .. 4760532 - -14.5  -4.98531   TGCGCAAACGAAAAA           GGGCACCTT TTGC AAGGTGCCC            TTTTTCTGAAGATGG 100 38
LOY33_RS21610 4757081 .. 4757095 -   -10  -2.59527   TGAAGAGCACAAGAT               TCCGGT GGC ACCGGA               TGCCGAAGACGAGCT  57 71
LOY33_RS21585 4753585 .. 4753598 -  -5.3  -2.90496   CGCTTTCGCAAATCA               CTGTT TATC AACAG                CTATTGCCCACCACT  48 26
LOY33_RS21580 4753402 .. 4753418 - -10.8  -4.63048   GCTAGAAACAAGAAA              GCCCGC ACTAG GCGGGC              TTTTCAGGGGGCTCC  90 74
LOY33_RS21575 4751909 .. 4751948 -  -5.9  -4.14243   TAGGCCAGCCGAAAA  CCATTGCCTGCTCGAACA CTGGC TATTCGAACA-GTAATGG  CATTCAGTCTATATC  66 69
LOY33_RS21570 4751061 .. 4751071 -  -2.4  -3.09516   GTGCCGACGACTGAA                 GTGG GCA CCTC                 AGCTGGAGAGCTTGG  41 55
LOY33_RS21565 NONE
LOY33_RS21560 NONE
LOY33_RS21555 NONE
LOY33_RS21550 NONE
LOY33_RS21545 NONE
LOY33_RS21540 4748614 .. 4748635 -  -2.2  -3.16881   CAGCCATGTGAGTAA           GGGAAGTC ATACAA GACCTCCA            TCAGCAGCGGGCTGC  41 10
LOY33_RS21535 NONE
LOY33_RS21530 NONE
LOY33_RS21525 4747766 .. 4747792 -  -7.3  -3.01712   CCCTTGCGGCGAATA        GGCGTGA-CCTT ACTC ATGGCTCACGCC         CTCCCGATCAGCGCC  53 8
LOY33_RS21520 NONE
LOY33_RS21515 NONE
LOY33_RS21510 4744536 .. 4744554 - -10.2  -3.17212   GGAGCAGGTCAGCAA             GGAGGCTC ATG GAGCCACC             TCGCTTGAATTGCCA  66 353
LOY33_RS21505 NONE
LOY33_RS21500 NONE
LOY33_RS21495 NONE
LOY33_RS21490 NONE
LOY33_RS21485 4741579 .. 4741601 -  -9.9  -3.55444   TTCTTAGCGCGGAAA           GGAGCATGA AATTA TCACGCTCC           CGCCGCAAATGAACA  69 45
LOY33_RS21480 4741018 .. 4741028 -  -6.8  -2.57132   CCTCGTTCCCACAAC                 CTGG GCG CCAG                 CTCAGCGAGACAGAC  50 134
LOY33_RS21475 4738482 .. 4738511 - -15.8  -2.92449   TAAACAGCTCACACA       GAGCCGACGAAG CGCCGC CTTCGCCGGCTC        TAACTTTTTATAAAA  87 47
LOY33_RS21470 4737676 .. 4737694 -   -11  -3.34043   CGGATTATCTGATAA             CTACCCAG CAT CCGGGTAG             TTCACGGCAGGCCGA  73 356
LOY33_RS21465 4737204 .. 4737216 -  -4.8  -3.27525   TCCCTCCAAACTCAA                TGGC TTAGG GCCA                TCATCCTTCCTACGC  49 220
LOY33_RS21460 4736303 .. 4736318 - -11.8  -5.32944   GCCATAACGAAAAAA              CCCGCC AGAA GGCGGG               TTTTACGGGGGTTCC 100 363
LOY33_RS21455 4734404 .. 4734438 - -25.2  -3.31792   GCAGCAGCGTTAGAA     GCGCCCGTCTCTTTCC AGA AGAAAGAGACGGGCGC     AGGTTGGCGCAATAG 100 470
LOY33_RS21445 4732174 .. 4732185 -  -4.4   -2.7556   AATGTGATTTAAGTA                GTCA TTCA TGAC                 CAGGTTCCCAGGTCT  44 19
LOY33_RS21440 4731084 .. 4731098 -  -7.8  -2.57468   GCGCATGATATTAAG               CCTCCG ACT CGGAGA               TTAACTCATTCTTGA  53 6
LOY33_RS21435 4730214 .. 4730225 -  -2.2  -3.53811   CGTATGCTGCGTAAA                GCAG CGAG CTAC                 GCCGAACTCTAGCTC  47 185
LOY33_RS21430 4727119 .. 4727148 -  -8.7  -4.22927   CGAGGAAGATAGAAA       CAACAAAGCCGCAC CAG GCG-GGCTTTGTTA       GGTGTTTAGTAGACA  78 426
LOY33_RS21425 4726275 .. 4726295 -  -2.3  -4.59773   TGGCAGTCTGAAAAA            GCTCGGCGC AGC GATCCGGGC            TCGACGCCTGGCGCT  70 356
LOY33_RS21415 4725693 .. 4725711 -  -3.2  -3.01712   GCTTTCCCCTTAACA             GTTTTTGT TTA ACAAAAAA             AGACCGCAAGGGTTT  42 202
LOY33_RS21410 4724106 .. 4724121 -  -7.6  -3.61517   AGGTTCGCTTAAGAA              GACTGA GTAA TCAGTC               AACTATATTCCTGAC  62 133
LOY33_RS21405 NONE
LOY33_RS21400 4722570 .. 4722584 - -12.8  -3.55622   TTCAACCTTTTCAAA               GCGCCG ACG CGGCGC               ATGGGCAACGTAAAA  81 52
LOY33_RS21395 NONE
LOY33_RS21390 4720873 .. 4720898 -  -7.6  -2.87132   GGCGGCCCTTACATA         TGGATAACCG AATATA CGGATATCCA          TATGTTATCTGCAAC  56 79
LOY33_RS21385 4720475 .. 4720492 -  -2.7  -2.84962   TGAGCAGGAAAACAG             CGATG GCAGTCAG CATCG              GCGCGCTCCTGGCTC  39 39
LOY33_RS21380 NONE
LOY33_RS21375 NONE
        arsH 4717525 .. 4717538 -  -3.7  -3.82084   GTTCAAGATCAACAA               GCTGC GCAA GCTGC                TGGTTGAACTGTCCG  57 478
LOY33_RS21355 NONE
LOY33_RS21350 NONE
LOY33_RS21345 4714386 .. 4714401 - -11.8  -3.79113   ACCGCTGCACAAGAA              CGGCCC ACCT GGGCCG               TTTTTTCATGCCTGG  83 31
LOY33_RS21320 4711087 .. 4711097 -  -8.2  -3.14051   GCATCCGGATTAACA                 CCGC AGC GCGG                 CTTTCGCCGGCAAGG  57 98
LOY33_RS21305 4709053 .. 4709066 -  -3.7  -2.70932   CTTCGTGCTCAATGA               TCGCC TGCT GGCGG                CCTGCCAGGCCTATG  41 298
LOY33_RS21295 NONE
LOY33_RS21290 4707291 .. 4707310 -  -2.8   -3.4582   TCAGGGCAGTAAATA            GTTACAGC AGGT GACGTAAC             AGTGGCGCCATGAAC  47 7
LOY33_RS21285 4706111 .. 4706129 -  -4.4  -3.25539   TAACTGCAAGGAATA             TGGCAGCC AGT GTCAGCCA             GCGCCCGGCCCCGGA  49 90
LOY33_RS21280 4704805 .. 4704818 -  -3.7  -3.14051   CCATGCCGATGAACA               GGGCC CGGC GGCGC                AGCAGCTGCAGGCGG  45 378
        hmgA NONE
        fahA NONE
        maiA 4700669 .. 4700708 -  -2.7  -3.64703   TTCGGTGCACTGAAA GCTTCGCCGGCCAG-GCCG GCTC CTACACGGGCCG-CGCAGC  GCCTGCAGGAGCCGG  51 61
LOY33_RS21250 4698272 .. 4698282 -  -2.4   -4.7497   TGCATGCAGTAAAAA                 GGCC AGC GGCA                 CAGCTTGAGAAGGCG  70 464
LOY33_RS21240 4697296 .. 4697313 - -12.7  -4.09923   AAGGCAATGAAAGAA             GGCGAGC CACG GCTCGCC              TTTTTTATTGACCAC  91 440
LOY33_RS21210 NONE
LOY33_RS21205 4690673 .. 4690689 -  -4.4   -2.8207   GCAAAGCCGAACAAC              GCGATG GCCAG CATCAC              TGCACCTCGCTTTCG  44 22
LOY33_RS21200 NONE
LOY33_RS21195 NONE
LOY33_RS21190 NONE
LOY33_RS21185 4685945 .. 4685960 -  -3.2  -2.78463   ACCTGGCCGACTACA              TCGAGG CGCA CCTGGA               GCAGGCGATCAGCCT  40 365
LOY33_RS21175 4684207 .. 4684242 -  -6.9  -3.35679   CCGTGCCATCGACAA   CCTGCGCGCGGCACT-GC TGG GCGAGCGCC-CGCGC-GA   CCTGGTGAACCCGCA  56 91
LOY33_RS21160 NONE
LOY33_RS21155 NONE
LOY33_RS21150 NONE
LOY33_RS21145 4676937 .. 4676953 -  -7.9  -4.06502   CAGCCGGAAATCAAA              CTGGGGA CCA TCCCCGG              TGCCGGCGGCAGCCA  69 410
LOY33_RS21130 4674935 .. 4674945 -  -3.2  -2.56203   GCAATCCACAAAAGC                 CGTC GAT AACG                 CGTGCCTGCCCCGGG  40 42
LOY33_RS21125 NONE
LOY33_RS21120 NONE
LOY33_RS21115 4670582 .. 4670619 - -14.2  -2.78384   CTTTTCTGGATGACA  TGTGAACCCCGGCACGGC GCCG GCCGTGCCGGGG--CACG   GCCGGCGCAGGCCTC  80 39
LOY33_RS21110 4669411 .. 4669427 -  -8.7  -3.71848   CTTCCTGATCAACAA              CGATGGC TAC ACCATCG              AACGGCTGATCCTGG  65 361
LOY33_RS21085 NONE
LOY33_RS21080 4662540 .. 4662571 -  -8.6  -3.25823   GCTGGCTCACAGCAA      CCTGCACCTGGCCGC CTG GCTGGC-GGCGCAGG      TGATCACCTCGATGG  58 181
LOY33_RS20990 4640990 .. 4641015 -  -3.8  -3.17714   TCAAACCCCGATGAA         CGCCTGGCGA TTTTTT CCGCCGGGTG          CCGCCGCGCCCAGCG  47 42
LOY33_RS20985 4639268 .. 4639290 - -17.7  -5.05782   AGGCAGCGGAAAAAA           CCGGGCGGC ACAAG GCCGCCCGG           TGGCAGGGGTTACAG 100 35
        moaC NONE
LOY33_RS20975 NONE
        moaE 4637956 .. 4637966 -  -5.4  -2.61264   TTTTGTACTTATAAT                 TCCA TAC TGGA                 CTTTTGTGTATTAAT  46 98
LOY33_RS20965 4637041 .. 4637072 -   -13  -2.74488   CAAGCACCTCAAGGA      GCTCAAGGCCTGAA CGAA CTCAGGCCTCGGGC       AGGCGACGGTCAGTC  73 35
LOY33_RS20935 NONE
        cysD NONE
        cysN 4627653 .. 4627680 - -19.2  -5.24531   AGCCGCCACAAAAAA        GCCCGCGATGGC CTTC ACCATCGCGGGC         TTTTCATTCAGCAGC 100 46
LOY33_RS20915 NONE
        mdeB 4622998 .. 4623016 - -13.8  -5.76237   GATACAAAGAAAAAA             GGGGCCGA TCG CCGGCCCC             TTTTTTCATCCCCTC 100 44
LOY33_RS20900 NONE
LOY33_RS20895 4620269 .. 4620295 - -12.3  -4.72631   AGCAAGGCAACAAAA        GCGGGCCGTCAC TGTA GCGACGGCCC-C         GGGTAATGGCAATCA 100 57
        zapE 4618875 .. 4618897 - -11.3  -3.30124   TGCGACGGGGGACAA           GCCGCTGCA TTATC TGCAACGGC           TGCGGATCGAGACGG  66 279
        rplM NONE
        rpsI 4615783 .. 4615806 - -18.2  -5.80248   CAAGACATAAAAAAA          GCCCGGTTCC ACCA GGAACCGGGC           TTTTTTTGAACGCCG 100 48
        petA NONE
LOY33_RS20860 NONE
LOY33_RS20855 4612882 .. 4612939 - -17.8  -4.15841   TTATGAAATTACAAA TGCAA-ACGCGCCCTGGGGGCCCTCCA TACTG CAGAGGGACCCCAGGGCGCGCGTTAAA CTAACAGATTTTACC 100 47
LOY33_RS20850 4612224 .. 4612244 -  -3.9  -4.08064   AACGGCTCCTTAAAA            CCTAACGCA TAT CGCGTTCAG            CGGCGGACAGGCTGG  60 6
LOY33_RS20845 4611754 .. 4611773 - -11.4  -5.76949   CAGGCCCAAAAAAAA            GGCGACCC CGCA AGGTCGCC             TTTTTTCATTTCACC 100 31
        rsmI 4606853 .. 4606871 -  -5.4  -4.79683   AAGCGATAAAACAAA             TAATATCA CTA TGACATTA             GTGGTCTTTCTGTTT  79 23
        rnpB NONE
        mraZ NONE
        rsmH NONE
        ftsL NONE
LOY33_RS20790 NONE
LOY33_RS20785 NONE
LOY33_RS20780 NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG NONE
        murC NONE
LOY33_RS20750 NONE
LOY33_RS20745 NONE
        ftsA NONE
        ftsZ 4589329 .. 4589339 -  -2.4  -3.27653   AGGCTGAGGATAATA                 GCAG ACC CGGC                 CTTTGCTGAACACCA  44 69
        lpxC 4588307 .. 4588326 -  -9.2   -5.4505   CGCGGCAATAAAAAA            GGGCCACC CGAA GGCAGCCC             CAAAAAATAACTAAA 100 58
        secA 4584746 .. 4584773 - -19.9  -3.70773   CTTGAGATGGAACAA        CGCCGCGACGG TTGGGC CCGTCGCGGCG         CGGTGTTCAGATATC 100 64
        argJ NONE
LOY33_RS20710 NONE
LOY33_RS20705 4581324 .. 4581338 -  -5.7  -3.14132   GGCCTGGCCGAGCAA               CACCT GGACG AGGTG               GTCGAAGTGCTGGCG  49 482
LOY33_RS20685 4577508 .. 4577533 - -13.3  -3.86015   CAGCGGCCGCAGAAA         CCTCGGACGCCG AAA CGGCG-CCAAGG         TTCCGGGTACACGGG  93 43
LOY33_RS20680 4576392 .. 4576402 -  -2.4  -2.71364   TCAGCGGGGTAAGCA                 TGGC AAG GCCT                 GGCAGGGAAAATCAG  39 211
LOY33_RS20675 4575132 .. 4575144 -  -6.9  -2.62983   TGGAGCCCGAGACCA                CCGAG CGC CCCGG                AGCCTAGGCCAGCGA  50 29
LOY33_RS20660 NONE
LOY33_RS20655 4571147 .. 4571169 -  -2.6   -3.2043   AGCAGTAGAAAAGCA           CGCATCAAGG GTT CCTCTACGCA           AGATGTCCTTGCAGG  44 74
        fxsA 4570649 .. 4570664 - -11.8  -4.98531   GCGCCAAATGAAAAA              CGGCCC CGAA GGGCCG               TTTCATGCTACGCGG 100 54
LOY33_RS20645 4570123 .. 4570133 -  -2.4  -3.15427   AATACTTTGGAGTAA                 CGGG AAA CCAG                 CGGATCAGCCTTCGA  41 30
        groL 4568398 .. 4568416 - -13.1   -5.4251   GCCAGACATAAAAAA             GCCCCGC ACAAG GCGGGGC             TCTTCTTCAAGCGGG 100 51
        colR NONE
LOY33_RS20625 NONE
LOY33_RS20620 NONE
LOY33_RS20615 NONE
LOY33_RS20610 4563411 .. 4563432 -  -6.5   -3.2614   GATGCCGTAGAGGAA           GCGGCA-GCG ATA CGCCTGCGGC           CGGTGCTGATGACCA  53 316
LOY33_RS20560 NONE
LOY33_RS20555 NONE
LOY33_RS20550 4547053 .. 4547106 -  -2.9  -3.35371   TACATCGCCAACGAA CGCTTCGACAAGGCCAGTGCGAATG CTGC CATTGCCAACGGCACGGCCGATGCG GTGGCCTTCGGCGTG  48 273
LOY33_RS20530 4543638 .. 4543650 -  -3.3  -2.52464   TCTTCCCCGAAGGCA                CCACC ACC GACGG                GCGCAGCCTGCGCAC  39 314
LOY33_RS20515 4541349 .. 4541402 - -20.9  -2.74371   AAGCCGCCAACATTA CCCGCCTGCCCGCACGGCAGCAAGC GACA GCCTGTGGCCATGCGGGCAGCCCGG CAACCTCAGGCCAGC 100 31
LOY33_RS20510 NONE
LOY33_RS20505 NONE
LOY33_RS20500 4538876 .. 4538901 - -19.1  -3.71917   AGCTGAAAGCTGAAA         GCGGCAAGGGA GTGA TCCCTTGCCGC          TTTTTTGTTGCCTGT 100 75
LOY33_RS20490 NONE
LOY33_RS20485 4534967 .. 4534977 -  -2.4  -3.61103   CAAGGCCAGCGCAAA                 CGCC GCA GGAG                 CCTGCAGTACCTCCT  47 56
LOY33_RS20475 4532345 .. 4532358 -  -4.5  -3.21747   GCACTTTAGTATTAA               CGTCA GTAT CGACG                TCGTTGCGCGGCCAT  49 40
LOY33_RS20470 NONE
        sbcB 4530351 .. 4530366 - -10.4  -4.14243   CAGGTCAGCCCAAAA              CGCCAG CATG CTGGCG               TTTTTTATTGCCTGC  82 43
        purU 4528738 .. 4528781 -   -13  -2.87564   GCACGGCGGTAGACA CGCGTTGTGCCCTTCGCCAGC AAG GCTGGCGAGGGGC-CGGTGCG GTCCTAGAACACCAC  74 29
LOY33_RS20430 4522164 .. 4522181 - -11.3  -2.57132   GGCCCGCTTGAGAAC             TTGCCGG CGAA CCGGCAA              CTTCAGTGCCTCGAC  59 47
        pcaR 4517610 .. 4517624 -    -7  -3.78034   GAGGGACATTAATAA               GGCGCG CGA CGCGGC               GCAATTCGATAAACG  63 81
LOY33_RS20405 4515898 .. 4515929 -  -5.3  -3.28924   CATTGGGCCGTACAA      TCCGATAATCG CCATAGCGTT CGATTATCGAA       CGTATTGTTGTTGTG  51 145
LOY33_RS20400 NONE
LOY33_RS20395 NONE
        pcaF 4512918 .. 4512970 - -22.9  -3.48924   TCACGTTCCACAGAA CAATCACCCCGCTGCCCCGACCT TGCGTGG AGGTCGCAGCAGCGGGGTCATTG ATTTACACGCGCTCG 100 28
LOY33_RS20385 NONE
LOY33_RS20380 NONE
        pcaD NONE
        pcaC 4508983 .. 4509000 -  -4.8  -2.73994   AGGCCCTGAAGATCA             GGCG-CG GGATT CGACGCC             CAGTTCATCCCACAC  44 5
LOY33_RS20360 4507281 .. 4507322 -  -5.8  -3.54424   CGCCACCCGGGCAAA CG-CTGGCGCGGGC-GCGACG TGG CGCCGCTGCGCG-GCAAGTCG TGGCTGGGCTACCTG  54 291
LOY33_RS20340 4501792 .. 4501810 - -10.3  -4.17089   CTCAAACTGGGAAAA             GCTCAGC CGGGC GCTGAGC             CGCGAAGAGATCGAG  85 498
LOY33_RS20330 4499827 .. 4499838 -  -2.2  -3.85698   GTGGGGCTGCAGAAA                GTCA GCGG CGAC                 GACCTGTGGATGCGG  54 491
LOY33_RS20305 4492089 .. 4492102 -  -2.3  -3.91473   ACAAATGCTCACAAA               TGCTC AATT GCGCA                GCGACGGGCTCAAGC  53 15
LOY33_RS20300 4490596 .. 4490611 -  -5.4  -3.28924   GACCGGGCGCTACAA              GCCGCAG ATT CTG-GGC              GGTGCACTGTTGATG  51 470
LOY33_RS20285 4487189 .. 4487199 -  -2.4  -4.02132   CCTGAAATCCAGAAA                 GTGC GCT GCCC                 TGTTGGCCATCACTG  56 161
LOY33_RS20270 NONE
LOY33_RS20265 4484055 .. 4484112 -  -8.5  -2.86271   GCGGGACGAGAAGGA CTGG-G-CGACCTGGCTTGGCGCAGCCG GCGTG CAACTGC-CCAGGCAAGGCCGGCGCCAG CATTTCGAGACACTG  54 465
LOY33_RS20255 NONE
LOY33_RS20250 4480050 .. 4480061 -  -5.8  -3.48036   CAGTATCAGAAGCAA                CTGC GCTT GCAG                 GAAGCCCGGCGGCTG  53 260
LOY33_RS20240 NONE
LOY33_RS20235 4478415 .. 4478453 -  -9.4  -2.81312   AAGGGATCTACGACA  CCGCGGCCGCCGAGCCG ATTCTG CGCGGCGGCGGCC-CGG   CGGATTACTTCGAGC  56 79
LOY33_RS20200 NONE
LOY33_RS20195 NONE
LOY33_RS20190 NONE
LOY33_RS20185 NONE
LOY33_RS20170 4463939 .. 4463970 -  -3.7  -3.53012   CCTTGCGTGGCGAAA     CCGGCCGCGCC-TCA GACA TGACGGCA-GGCCTG      GCTCAGTTCGGACAG  51 5
LOY33_RS20165 4462916 .. 4462928 -  -3.4  -3.43042   CGGGCGAGGAAAAAC                GACA TGATC TGTC                CTTTGAGCTAGGGAG  47 86
LOY33_RS20160 NONE
LOY33_RS20155 4458842 .. 4458899 -   -28  -2.89602   TGTCGCACAGTAAAC CTTTCGCCGGCAAGGCCGGCTCCTG GCGATGTTG CAGGAGCCCGCCTTGCCGGCGAA-G CGGCCAGCAGGGTCA 100 38
LOY33_RS20115 4451190 .. 4451202 -  -4.8  -3.06492   CGATGCAGCTCAACA                GCCT GCTCA AGGC                GTTGCAGCAGCAGGC  45 486
         ung NONE
LOY33_RS20100 4447420 .. 4447434 -  -2.8  -4.07568   TTGCCTTTTCTAAAA               TAGTCA TCT TGACTC               TCCATTTCAGGTAGA  58 180
LOY33_RS20095 4445269 .. 4445294 - -20.5  -2.56596   TTCCTCACCAACGCA         GCGTGCTGGGG TTTC CCCCAGCACGC          GACTGTCAGCTCTGA 100 31
LOY33_RS20090 4442823 .. 4442838 -    -9  -4.61566   CCTGAAACGAGAAAA              GGAAGC CGAG GCTTCC               TTTTCTTTTCTACTG  86 50
LOY33_RS20060 NONE
LOY33_RS20055 4434960 .. 4434975 -    -4  -3.37796   GCGCAGCACCGACAA              GCTCGAC TAT GTCGA-C              ATCGTGCAGATCGCG  49 170
LOY33_RS20040 NONE
LOY33_RS20035 4432345 .. 4432358 -  -4.5  -3.55487   CTACAGCAACTACAA               GGTCA GCCG CGACC                TGATCGAGCTGAGGA  52 152
        rpoE NONE
LOY33_RS20020 NONE
LOY33_RS20015 4428072 .. 4428105 -  -7.3  -3.98083   CAGCCAACGCACAAA     GCCCGGCAACATCCT CGAA AGGCTGCGACCAGGC      TCGGTGGATCGGCAT  68 186
LOY33_RS20010 4426533 .. 4426554 - -17.3  -4.72272   CGCGCCCATGAAAAA           GCCCGACGC ATCG GCGTCGGGC            TTTTTCTTACCGCGA 100 57
        lepA NONE
        lepB 4422360 .. 4422385 - -14.7  -2.50345   ATGCCAGAAAAGCAT         TCGGCGCTGTC GAAG GACAGCGCCGT          TAGGGTGTTACTTGA  78 33
LOY33_RS19990 NONE
         rnc NONE
         era 4420538 .. 4420570 -  -8.4  -3.13522   AGCGCTTCACGAAGA     GGTGGGCCCGACACC GGCC GGTGTCGGGC-CAGG      GCAATCAGAGGTCGC  60 30
        recO NONE
        pdxJ 4418731 .. 4418747 -  -4.3  -2.80816   TCGGCATCGAGCAGA              GCGCACG GGG CGTGCAA              TGCTGGGTGCGCAAC  44 324
LOY33_RS19955 NONE
LOY33_RS19950 NONE
LOY33_RS19945 4411019 .. 4411030 -  -2.2   -2.6627   CGAACCGATCATAAG                CAGC CCAA GCTA                 ACGCCAAGGTGAGCC  38 46
LOY33_RS19940 4410722 .. 4410768 - -14.4  -2.73554   GCAAGTAATCAGAAG GGGGCCTCTTCGCCTGC-AGG AGCCGG CCTTGCCGGCGCAGAGGCCCT TGCGAACACGGCGTG  80 43
LOY33_RS19925 NONE
LOY33_RS19920 4406578 .. 4406622 - -24.3   -3.4439   CAGAGCAATCCAGAA GCCGCAAGGCGCTGCTGGCCA GCA CAGCCTGCAGCGCCTTGCGCC CTTCACTCAAAGGCC 100 32
LOY33_RS19915 4405314 .. 4405329 -  -2.4  -4.56597   CTGCTGGTGGAAAAA              CAGAGC CAGT GCCCGG               TCACGCTCGATGTCG  67 331
LOY33_RS19885 NONE
LOY33_RS19880 4395207 .. 4395220 -  -3.7  -4.07568   GGTTGCCCTGGAAAA               GGCGC TGAC GCGCA                AGGCCAAGAGCCTGC  61 131
LOY33_RS19860 4388778 .. 4388795 - -14.1  -4.99638   ACAGCCACACAAAAA             CCCCGGC CTGG GCCGGGG              TTGTGTACATCAGGA 100 35
LOY33_RS19845 NONE
LOY33_RS19840 4381300 .. 4381345 -  -3.1  -4.07568   GCGCCTGGGTGAAAA GGGCCTGTTCGCCACGCTGTAC GCC GCAGTGCGCAGCGA-CATGCTC GATGCACCGTACATG  59 128
LOY33_RS19830 4378817 .. 4378842 - -11.1  -3.61398   GCCGGCGTTCAAGAA         GGC-CGGCGCCA ATG TGGCGCAGAGCC         TGGGCTTTGCCGAGG  70 522
        ybaK 4366310 .. 4366327 -  -3.3  -2.53876   CTGCATGGGAAGGCA             GCGAGCA TGCC TGCCCGG              GCGCTCGCGCTTCCA  39 75
LOY33_RS19765 4365440 .. 4365485 - -12.7  -3.14211   ACGCTTCGCCAGCAA GGCTGGCTCCTACAGGAAA TTGCCTGG CCTACTGTAGGAACCAGCC TTGCTGGCGAAAAGG  76 45
LOY33_RS19750 4360868 .. 4360886 -   -16  -3.60627   GCATTGTATCGGAAA             GCCGAGCG TGA CGCTCGGC             CTTGCCGATATCAGG  90 36
        grxD 4360431 .. 4360448 - -14.1  -5.28176   GGCAGGCACAAAAAA             GCCCCGC AGAT GCGGGGC              TCTTCAGTGCAAAAC 100 46
LOY33_RS19730 4358564 .. 4358580 - -10.8  -5.65177   ACAGGCATAAAAAAA              CCGGCC ACCAG GGCCGG              TTTTTTCATGCGTGG 100 44
LOY33_RS19715 4355642 .. 4355677 - -10.4  -4.11897   ACAAAGCGACAGAAA    TTGTCGTCGGCGCGACC GGC GGTCGCACCGTCGA-AT    CAGGCGGCGGGTTTG  82 25
LOY33_RS19710 4354287 .. 4354303 - -15.1  -5.66684   GAAGGCATAAAAAAA              CCCGGCC TCA GGCCGGG              TTCCTTTCGTTCAAG 100 47
LOY33_RS19700 4352461 .. 4352471 -  -4.6  -3.96093   CAGACGAACAGGAAA                 CGGA AAG CCCG                 CCCGAAACGGCGAAG  61 206
        apbC 4344604 .. 4344625 -  -8.6   -5.0133   CACTGCTTGAAAAAA           GCCCTGCC CTCACC GGCGGGGC            TTTTTTTTGCCTTGC 100 160
         dcd 4343371 .. 4343399 - -13.2  -3.05384   CGGCTCCTGAGCGAA       GTC-CGACACGCC TCCT GGCGTGCCGGGAC        GGTTCATCTGCTTGG  76 79
LOY33_RS19640 4342782 .. 4342815 -  -2.3  -3.01791   ACGCCCGGCTGAAGA     TCACGCTGATACGCGG CAA CCACG-ACCTGCATGC     CGGCGACCCGCCCGA  41 335
LOY33_RS19555 4324766 .. 4324797 -  -8.7  -3.49884   ACACAGGAGTAAAGA      CGCGCCCGCGAC ACTTCACAA GCCGCGGG-GCG      CAAGGGCTTCAGCGA  66 34
LOY33_RS19550 4323965 .. 4323993 - -10.9  -2.63596   CTGCACGCCACATTA        CCGGCTGGCACCC TCC GGATGCCAGCCCC        GATGTCGATCAATTG  66 34
LOY33_RS19545 NONE
LOY33_RS19540 4322864 .. 4322876 -  -3.4  -4.12599   AAGAAGCCCTGAAAA                TCAG AGGCG CTGA                AGTATCAGCTCCCCG  60 13
        dinG 4320044 .. 4320070 -  -4.2  -3.68024   CTGTGCAATAGACAA         CGGGGCACTGCA AAG CGCTGTGCCGCT         CAGGAAATTTCCCGG  54 25
LOY33_RS19525 4317772 .. 4317789 -  -2.6  -3.66803   TGGGAACACCGCAAA             GCCAGG CGGTCC CCTTGC              GCTCTCAGGCGCTTA  51 38
LOY33_RS19520 NONE
LOY33_RS19515 NONE
        pdxH 4314762 .. 4314793 -  -7.1  -3.43217   GTCAAACGCAAGGAA      TTGGCGGCCTGGC TGGAAC GCGCGGCCGCCGA       ATACCGCGCCGGTTA  58 38
LOY33_RS19500 4313891 .. 4313916 - -16.9  -4.86621   ACCGGCAATGAAAAA         CCCCGAC-CGGC GGT GCCGAGTCGGGG         TTTTGTTTGCACGCC 100 70
LOY33_RS19475 4308335 .. 4308349 -   -10  -3.61178   CTGACCGACCCGAAA               GTACGC GAC GCGTAC               CTGGGGGGCTGAACC  71 71
LOY33_RS19445 4302367 .. 4302379 -  -3.3  -3.44274   CAACGACAAGAGCAA                GTTCG TGT CGATC                AACGATATCCGCCTG  48 362
LOY33_RS19435 4298773 .. 4298784 -  -2.2  -3.61398   CTGGGCCGCGAAGAA                CTCG TCAG CGAA                 GTGGAAGATGCGCTG  48 480
LOY33_RS19420 4293120 .. 4293134 - -11.4  -3.51329   GATGGCCAACGACAA               CGGCTC GAT GAGCCG               CTACACCCTGACCGA  72 102
LOY33_RS19410 NONE
LOY33_RS19405 4291809 .. 4291822 -  -5.3  -3.83026   GGGCGGGAGAGGAAA               TTGAC CGAG GTCAA                TGGCGCCCATCAACG  61 80
LOY33_RS19400 4291575 .. 4291594 -  -7.8  -5.81412   TCCAGGCAAAAAAAA            TGGGCAAC CGAA GTTGCCCT             AAATGCCTTGCGTGC 100 58
LOY33_RS19395 NONE
LOY33_RS19390 4289199 .. 4289211 -  -3.3  -3.57792   GTACGCATGGTCAAA                CTCCT TAC AGGGG                CCCCAGTACGCGGGT  49 17
LOY33_RS19385 NONE
LOY33_RS19380 4287402 .. 4287423 -  -8.7  -3.20723   TCGGCATCAACGCAA           GCTTCAGCG AAAC CACCGAAGC            GCAGTTCGATACCCT  56 463
LOY33_RS19370 4285889 .. 4285911 -  -5.5  -3.28712   CCTGGGCGTGCACAA           CCAGGGC GCGCCGATT GCCCCGG           CGGTGATGGCGCAAC  51 179
LOY33_RS19360 4284327 .. 4284374 -  -5.5  -3.65351   CTACCCGGACTGAAA TGCAGGCACC-ACGTT-CCGGCG CCTT CGCCGGCATGGCCGGCTCCTGCA GCTAGTGCTTGCGGC  58 47
LOY33_RS19350 4281968 .. 4282002 -  -4.9  -3.72576   GCCTGCCCGACGAAA    CCCTGAGCAAAGGCCG CGAG CGCCCCTTGCCC-GGC     CGGCGCGACCCTAGC  55 49
LOY33_RS19340 4279770 .. 4279788 -    -3  -2.94099   GTGGCGGAGCAGAGA             GCTTGAAG TCG CTGCAGGC             TGCAGCGGTGCTACA  42 54
LOY33_RS19335 4277718 .. 4277729 -  -5.8  -4.32067   CAGTGGACAAAACAA                CCCT CAAG AGGG                 ACAAGTCGGCCCCTT  69 82
LOY33_RS19330 4276712 .. 4276726 -  -7.8  -3.81287   CACATCAGCAGCAAA               GGCAGA AAG CCTGCC               TCCACCTTGTCGATT  68 61
LOY33_RS19325 NONE
LOY33_RS19320 4274729 .. 4274754 -  -5.3  -3.35597   GCCAGTCGGCAAATA         CCTGTTCAGCC GTGG GGCTGCGCAAG          CGGTTCTGAGTACAC  53 206
LOY33_RS19300 4268441 .. 4268457 -  -9.4  -3.06915   ATCGAGTTCATTCAA              CCAGGC CCAGC GCCTGG              GCAGCCTCGCCCACG  64 1
LOY33_RS19295 NONE
LOY33_RS19290 4266097 .. 4266109 -  -4.8  -3.90112   TCTCCCTCAAGGAAA                GCCT GTTCA AGGC                GCTGTACCCCATAGT  61 219
LOY33_RS19275 4263920 .. 4263947 - -14.2  -2.68813   ACGGCAGAATAACAG        CGAACCGGCC AGAGTGAA GGCCGGTTCG         GGTATTGCGCGGGGG  78 42
LOY33_RS19270 4263175 .. 4263194 -  -2.8  -3.37344   GGCGCAGCGAACGAA            TCACAG-GC AGC GCTCGGTGA            ACAGGTAGCCCAGGC  47 6
LOY33_RS19265 4261698 .. 4261710 -  -9.1  -3.34894   AAGGCGGTGCAAACA                CCCTG TTT CAGGG                CATTTCGTGCACCGC  64 147
LOY33_RS19260 4260168 .. 4260185 - -11.3  -5.96219   CAGGCACAAAAAAAA             GCCCATC CGAA GATGGGC              TTTTTGCGTTTGGCT 100 45
        ttcA NONE
LOY33_RS19240 4257007 .. 4257017 -  -8.2  -3.02461   GAAGGCGTCTGAATA                 GGCG GCG CGCC                 TATCGCGGGTCAAGC  57 109
LOY33_RS19220 4254891 .. 4254907 -  -6.5   -4.3129   GATGGAGCAGGAAAA              GCGCTTT CTG AAGGCGC              TGGAGACCGTGCAGC  73 208
LOY33_RS19195 4249384 .. 4249410 -  -2.9  -2.79694   CAGAACAGGGAATGA        CGGCTGAGCACC TACA GGTCCTC-GCTG         GCGCTGAGCACATAG  41 10
LOY33_RS19190 NONE
        cysM NONE
        rlmD 4245560 .. 4245597 - -11.2  -3.63922   ATGCGCTTGAAAACA   CGGGTGTCGCCCCTGC CAGATC GAAGGGGCTACACCGG    GCGGGCCAGCGTCGC  78 40
        relA 4243237 .. 4243250 -  -2.3  -2.57132   GCCCGCTCCCACAAG               GATCC TGCA GGAGC                GGGCCTGCCCGCAAT  38 48
        mazG 4242346 .. 4242363 -  -6.9  -3.09878   CTCACTTATGCAACA             GCTCAGC CGCA GCTGGGC              AGGTTCTTTTCCTGA  54 10
LOY33_RS19165 4241735 .. 4241764 - -14.3  -3.85698   CCCCGTCTTCAGAAA       CAGCAAACCCCGC CGAG GCGGGGTTTGTCG        TGTCTAGCCCAGCAG 100 43
LOY33_RS19140 NONE
LOY33_RS19135 NONE
LOY33_RS19130 NONE
         hda NONE
LOY33_RS19120 4234282 .. 4234322 - -23.4  -3.53224   GACGTTTTCTGTAAA CACGCACGGCGGCG-AGCT TTTC AGCTACGCCGCCGTGCGGG  ACATCACGCGCAGAC 100 41
LOY33_RS19115 4233595 .. 4233613 -  -8.8  -3.14132   CTGGCGGGTGAGCAA             GGCGCAGT AGC ACTGCGCT             GACGTGTTCGCCGGC  60 82
        cobO NONE
LOY33_RS19095 NONE
        bluB NONE
        cbiB NONE
        cobD NONE
LOY33_RS19075 NONE
        cobU NONE
        cobT NONE
LOY33_RS19060 4223079 .. 4223093 - -11.4  -3.42354   CAGGGCAATCCAGAA               CGCCTG CAT CAGGCG               ATTTCCGCGAAACGA  73 19
LOY33_RS19055 4222341 .. 4222356 -  -2.5  -3.07113   CATGACCGCAGCGAA              GAGCT CCTGAC AGCCC               CTTCAGAGTGCCAGG  41 28
LOY33_RS19050 NONE
LOY33_RS19045 4220607 .. 4220618 -  -4.4  -3.17901   ATACGCTCAAGCCAA                CTGT TCCA ACAG                 GCGCACCAGTTCATC  49 5
LOY33_RS19040 4219309 .. 4219345 -  -4.3  -3.22298   GCCAGCCAGCACCAA   CGCTACCAGGCGCGCGG TCATG CCGC-CTCC-GGCCGCG   CCTGCAGCCGCGCCA  47 6
LOY33_RS19035 4218523 .. 4218535 -  -4.7  -3.16742   CTCAAGGCCTACCAA                CTGGC CAT GCCGG                TGGCCTTCGCCTGCG  47 113
LOY33_RS19025 4217278 .. 4217294 - -12.3  -5.14563   TGTTGCATGAAAAAA              CCGCCTT CCA AAGGCGG              TTTTTTTATGCCCGC 100 31
LOY33_RS19005 4213382 .. 4213409 -  -5.4  -3.65351   TCACCCCCAGGGAAA        TCCCCCAGAGCT TAAC AGCCCCGGGCGG         TCGATCAGTGGCTCG  58 30
        rmuC 4211821 .. 4211835 -  -8.5  -3.17212   CGACTACCTGAGCAA               GCCGG TCAAG CCGGC               GGCCCTGCGCGCCCT  56 43
LOY33_RS18985 4206027 .. 4206078 -  -8.4  -3.01924   GATCGCCCTGCAATA CGCCATCGGCCGGCGCATCGGCAG TCGC CAGCTGATGCCCTGGCTGCTGGCC GGGATGCTGCTGTTC  55 411
LOY33_RS18975 4203870 .. 4203883 -  -3.7  -3.15324   TAGCGCCAGCAAAAC               CCTGC CGGA GCCGG                CCTTGTCGGCGAAAC  45 52
LOY33_RS18970 4201391 .. 4201423 - -11.9  -2.71791   ATCCGTCGCCGAAAC      GGCAGCGGTCGACGC CAC GCGTTGACCGCCACT      TGCCCCCCGGCAAGG  70 469
LOY33_RS18950 4199133 .. 4199143 -  -4.6  -2.76189   TAACCGACTGAACTA                 CCGC TGC GCGA                 TACACTGAGAAGTGG  44 38
LOY33_RS18945 4199001 .. 4199016 - -10.4  -5.64274   CCAGGCACAAAAAAA              GCGACC CTAG GGTCGC               TTCGTTTGTGGCTTC 100 72
LOY33_RS18925 4192419 .. 4192432 -  -4.5  -4.12902   CAAGCAGCTGCAAAA               GGCCA AGGA TGACC                CCAGCACCGGTATCG  62 489
        pcaQ 4186743 .. 4186763 -  -3.8    -3.794   GGGCAATCGAGTAAA            GCCGCGAG CTTAT CAGGCGGC            CACGACCAATGGCTA  57 152
LOY33_RS18895 4185933 .. 4185963 - -16.3  -3.92075   AGCCCGATCCATAAA      CGACAACGCCCCGT CGAG ACGGGGCGTTGT-G       CACACAGCGGGACGC 100 41
LOY33_RS18890 NONE
LOY33_RS18885 NONE
LOY33_RS18880 4184405 .. 4184418 -  -6.7  -2.74012   GCACCATGCCAAGGA               TGTGC CCGG GCACA                GCCTGTACCTGATCG  48 57
LOY33_RS18865 4179332 .. 4179379 -   -30  -5.00616   CTGGGCCTGAAAAAA GTTCGCCGGCAAGGTCGGCTCC TGCA GGAGTCGGCCTTGCCGGCGAAC AGGGCCCTATACCAG 100 32
LOY33_RS18830 4172721 .. 4172731 -  -8.2  -3.38272   CATGAGCATCGACAA                 GGCC ATC GGCC                 TGGTTCGCGACGTGG  60 318
LOY33_RS18790 4165343 .. 4165359 -  -3.5  -2.78463   ATTCGTCCTAGTACA              GCTTGGG CGC CCCCGGC              GGGCGCGACTTGAAG  41 1
LOY33_RS18785 4164002 .. 4164020 -  -2.3  -4.30576   GTTCGAGTATGAAAA             GGTGCGC TACGT GTACACC             GAGGCACGCCGCCTG  65 59
LOY33_RS18770 4161360 .. 4161378 -  -5.2  -2.90075   TGCCGGCGAACGATA             CAGCGTGA GCC TCAGGCCG             TGCGCCGCACCAGCC  48 18
LOY33_RS18760 4158639 .. 4158670 - -20.9  -3.64822   AGCCGCCCATGCAAA      GGGCCGCGCAGTG GTAAAA CACCGCGCGGCCC       TGGAAGGTGCCAGAT 100 56
LOY33_RS18755 NONE
LOY33_RS18750 4156510 .. 4156523 -  -9.5  -5.71712   CCCCACATAAAAAAA               CGGCC CGAA GGCCG                TTTTTTTATTGCTCA 100 45
LOY33_RS18740 4155281 .. 4155293 -  -3.3  -3.07443   GCATACCGTAGCGAA                CAGCC TAC GCCTG                CGTCTGACGCCCCTT  43 17
LOY33_RS18735 4154854 .. 4154888 -  -9.5  -3.70902   GCTCTGACAGGCAAA    TAGACAA-TTCCCACA ACTT TGCGGGAATTTGCCTA     CAAGATCCTACCCGC  72 41
        csrA 4154308 .. 4154332 -  -7.2  -3.78022   GCCACATGCAGGAAA          GGTTTCGC GTAGCATGT GCGAAACC          TTTCCTGATTCTGTA  63 283
         pap 4145747 .. 4145763 -  -2.1  -5.07107   CAAAGGCTGAAAAAA              GCTCTGC TAC GCAGCCC              GTCGCGGGTCAAGCC  77 102
LOY33_RS18690 NONE
LOY33_RS18685 4143302 .. 4143320 - -13.1  -5.55769   GTCGACAATAAAAAA             CGCGCCG ACAGG CGGCGCG             TTGCGGATTCTAGCA 100 58
LOY33_RS18680 NONE
LOY33_RS18675 NONE
LOY33_RS18670 NONE
LOY33_RS18665 NONE
LOY33_RS18660 4136189 .. 4136227 - -10.2   -3.6502   TATGGCGTATCGAAA   TTCGCCACCGAAGGCCTG ATG CAGACCCTCGCCGACGAG   CTGGAGAACGTTGCC  70 221
        mtnA 4131491 .. 4131510 - -13.6  -3.72893   GATCTGCGCAGTAAA            GACCGCCT CGGG AGGCGGTC             TTGGAAACCGTCGGA  88 129
        gyrA 4128659 .. 4128688 - -11.3  -2.94099   CTGTGGGAGCAGACA       CCGCAGTGGCGGG CCTG CCCGCCCCCACAG        CCGCTCCCATAGGTT  68 54
        serC NONE
        pheA NONE
LOY33_RS18615 NONE
         cmk 4123371 .. 4123387 -  -6.5  -2.62515   AATTCCTGTAGATTA              GGGCG AGACATA CGCCC              ATCAGCCACATTCCA  48 115
        rpsA 4121637 .. 4121654 - -12.7  -5.28176   CGCAGGCACAAAAAA             GGGCGAC CGAA GTCGCCC              TTTTTAATGATCAAG 100 47
        ihfB NONE
LOY33_RS18595 NONE
LOY33_RS18590 4120180 .. 4120196 -  -4.4  -3.53224   CATTTTCTTTTGAAA              CCAACC ATTTA GATTGG              AAGGTCAGTAAACGG  53 239
LOY33_RS18585 4119068 .. 4119084 -  -7.2  -2.87132   GCCGTGCTCCATACA              GGACGC GTCAA GCGCCC              TTCACCTAGGAGCGT  53 31
LOY33_RS18580 4117128 .. 4117164 -  -9.6  -3.21099   CGGCTCCAGCACCAA   CGCTGCACAAAGCATCA AAAG CGA-GCTTTATGCAGCA    CAAAATTTTCGAACC  66 435
LOY33_RS18575 NONE
LOY33_RS18570 4114746 .. 4114764 -  -6.7  -3.18264   GCGCCGACTCATGAA            GC-TGCCC CGGC GGGCACGC             TGCTGGGCAGGTTCA  54 0
        neuC 4113598 .. 4113608 -    -4  -3.76393   ATACGTCAACTCAAA                 TCAT GAA ATGA                 CTTGTGAACTGAGAC  54 5
        neuB 4112433 .. 4112456 -  -4.4  -3.33214   ACCCCAACGACAACA          CCTGGGCATG CCCA CCTGCCCCGA           GCAGAAGCACCGGAC  51 68
LOY33_RS18555 NONE
LOY33_RS18550 NONE
LOY33_RS18545 NONE
        hisH 4108366 .. 4108386 -  -2.5  -2.79289   TACTACTGCAAGAAT            CTTCATTGC ATT GCCACAAAG            CTGGAAAGGATAGAA  39 7
LOY33_RS18535 4107598 .. 4107615 -  -3.4  -2.90763   CCCACAGCTCAGACA             GCAGCGC TGCGT GC-CTGC             CTTGATTGAGCATAA  42 62
LOY33_RS18530 4105142 .. 4105160 - -14.6  -4.93547   GTAATCAACGAAAAA             TCGGCGTG ATT CACGCCGA             GCTGCCCGGCTGGGA 100 357
LOY33_RS18515 4103266 .. 4103288 - -13.4  -4.91511   ATTTGATGATAAAAA           CGGATCGAGC ATT GCCCGACCCG           CCCCTCCTCAGGTCA 100 38
        pyrF 4102092 .. 4102119 - -14.9  -3.14132   CGCCTTCGCCAGCAA        GGCCGGCTCCT CCTTGT AGGAGCCAGCC         TTGCTGGCGAAAAAC  85 49
LOY33_RS18495 4099728 .. 4099739 -  -7.2  -3.18735   TGAAGACCCGAGCAA                GCGG TACA CCGC                 GGCGGTCTGGTGCGG  52 362
LOY33_RS18485 4097620 .. 4097642 -  -4.9  -3.40073   AGCCTGATCAAGTAA          TCGGC-CG-AG GTT CTGCGAGCCGA          CCTGCCCAGGTCGGC  51 479
        prmB 4093885 .. 4093920 - -10.4  -3.19081   CACTCAACGAAGACA    CACGCCTGCGCCGCGAC CAG GT-GCTGCGCAGCCATG    GCCTGGAGGTCGAGT  62 419
        aroC 4091074 .. 4091106 - -19.1  -3.09516   GCCGCCAGTAGGGAA      TCGGCGCCACGGCTC AGC GTGCCGTGGCGTCGA      CGTCGGGCAGGTGCA 100 41
LOY33_RS18435 NONE
LOY33_RS18430 4089345 .. 4089378 -  -8.8  -2.52464   TTTGCTGGCAAGCCA     GTGCCCACAGGATC ATCTTG GTTCCTGTGAGCGC      TGGCTTGCAAGCCAG  57 55
LOY33_RS18420 NONE
LOY33_RS18415 4087262 .. 4087277 -  -4.6  -3.30441   GATCACCCTGCATAA              CCTGCC CGAG GGCATG               GCCATCGGCGTGGGC  49 403
LOY33_RS18405 4085990 .. 4086013 -  -5.3  -3.55622   GGCAACTGGCCGAAA         GCTG-GCAGCC GGCG GGC-GCGCAGC          TGGATACGGTAGCGC  54 408
LOY33_RS18395 4083555 .. 4083584 - -15.7  -4.08767   CCCACGGCCCGAAAA       GCCAAGACCCCGG CAAG CCGGGGTCCTGGT        CAGTGCAACAGCCCG 100 45
LOY33_RS18390 NONE
LOY33_RS18385 NONE
LOY33_RS18380 NONE
LOY33_RS18375 4079691 .. 4079732 -  -2.9  -4.36914   CCGTGTTTCAGAAAA GCTGCCTGGCCTGCCACCG ACTCAA CGGTGCC-GGCGATGC-GC AGTTCGGGCCCGACC  66 289
LOY33_RS18365 4077389 .. 4077410 -  -5.1  -4.14472   CGAAGAGCTGGAAAA           CAACGTACT CAGC AGTTCGCTG            CAGGAAGACGATATC  64 476
LOY33_RS18345 NONE
LOY33_RS18340 4074859 .. 4074886 - -17.8  -5.06816   ATGGCCCAACAAAAA        GCCCCCGAACTC TTTC AAGTTCGGGGGC         TCTTCGCGTATCTGA 100 44
LOY33_RS18335 4074299 .. 4074324 -    -6  -3.01712   CCTGGCTGGCGAACA         GCGCGCCGCC GATCAG AACGGCTCGC          TACCCTCGCGGAACT  51 12
LOY33_RS18320 4069741 .. 4069762 - -10.9  -2.71263   AAGTGCTCTGAAGCA           CTTCGCTGG CTTG CCAGCAAAG            AGGCTGCCACGGCTA  66 38
        earP NONE
LOY33_RS18300 4066925 .. 4066940 - -11.8    -5.626   CAGGGCATAAAAAAA              CCCGGC CTTG GCCGGG               TTTTCGTGTTCGCGC 100 53
LOY33_RS18285 4064369 .. 4064391 -  -6.9  -3.30441   GATGACCGGTCAGAA           CGTCACCGA ATGCA TCGGCGGCG           CCCGGCCGATCACCG  54 202
LOY33_RS18275 4062070 .. 4062088 - -10.2  -2.55253   AGGAACGTCAAGGCA             GAGTCCGC GGT GCGGACGC             GCAGCCGAAGCTGGC  62 226
LOY33_RS18260 4058595 .. 4058614 -   -15  -3.47029   GCAGGCAAACAGGAA            GGGCGACC CACG GGTCGCCC             TTTTTCATTTCAGCG  87 35
        msrB NONE
LOY33_RS18240 4054679 .. 4054726 -   -11  -3.61398   CTGCCGGGGGAAGAA GCCGCCCAGCTGGCGCCGCTGC AGCA GCAGGCCCGCCCGCTGGCCCGC AACGCCCTGTACCAG  70 493
LOY33_RS18230 NONE
LOY33_RS18225 4051321 .. 4051365 -   -21  -3.67611   CTGATTGCAACACAA CCCATTCGCCAGC-A-GCTCCC GAC AGGAGCCTTGCTGGCGAATGGG CGCAACGCCTCTACC 100 45
LOY33_RS18215 NONE
LOY33_RS18210 4049964 .. 4049978 -    -5  -3.55071   GGACACTGCCTGAAA               CACCAT GGT ATAGTG               TTTCAGTTCCAGAAA  53 102
LOY33_RS18205 4049877 .. 4049898 -  -4.3  -3.54543   AGCTATTCCCGCAAA           TGGCGTCCC CTAG GGGACTCGA            ACCCCTGTTACCGCC  51 4
LOY33_RS18200 4049765 .. 4049784 - -13.6  -6.30182   CGAGACAAAAAAAAA            CGCCGTTC ATAC GAACGGCG             TTTTCTTTGAATTTG 100 39
LOY33_RS18195 NONE
LOY33_RS18190 NONE
LOY33_RS18185 NONE
        asnB NONE
LOY33_RS18175 NONE
LOY33_RS18170 NONE
LOY33_RS18165 4040182 .. 4040201 - -13.6  -5.65927   TATCGAAACAAAAAA            CGCCGTTC ACAT GAACGGCG             TTTTTTCAGCTGGAA 100 45
LOY33_RS18150 4036173 .. 4036196 -  -5.9   -2.5955   AGGGTTCACAAGGCA          GGCGGTCAG ACAGGG CCGACCGCG           ACGAATGTGGCCATG  46 108
LOY33_RS18145 NONE
LOY33_RS18140 NONE
LOY33_RS18130 4031498 .. 4031541 -  -7.5  -2.69647   AATTCCCACACAGTA GCGACCCCCT-CGAAAAAGT CCGCC ACTTTACCATAGGGGGCCAC GGGGCCGAACAGCGT  50 40
LOY33_RS18125 NONE
LOY33_RS18120 NONE
        lpxK 4029418 .. 4029442 -  -2.7  -5.26119   GCCGGAAAAAGAAAA          TGTCAGGGC TGGCGAG GCCCGGGCA          GCAGACGCGACAGCT  80 3
LOY33_RS18110 NONE
        kdsB NONE
LOY33_RS18100 NONE
        murB 4026842 .. 4026867 - -20.5  -4.72986   GACGGCCATTAAAAA         GCCCCGCCAGT GCAA ACTGGCGGGGC          TTTTTATTGCCTGCT 100 114
        rluC NONE
LOY33_RS18080 NONE
        sppA 4020184 .. 4020199 - -11.8  -5.52023   ACCAGCAATAAAAAA              CCGGCC ATCT GGCCGG               TTTTTCATTAATCAG 100 46
LOY33_RS18065 NONE
        rpmF NONE
        plsX 4017657 .. 4017678 - -13.7  -3.63744   TTGTCGTCGAAAATA           GCGCCCAGC CGGG GCTGAGCGC            GAGAAAACTGACAAT  88 95
        fabD NONE
        fabG 4015796 .. 4015812 -  -3.6  -3.62348   AAGTTTATAGAAAGA              CGCCCG CTTTT CAAGCG              TAATGCATCCCTCGA  51 139
        acpP 4015435 .. 4015459 -   -10  -5.65927   CATGCAAAGAAAAAA         CCGCAC-GCCA GTAA CGGCAGTGCGG          TTTTTCCATGACAAG 100 60
        fabF NONE
        pabC NONE
        mltG NONE
         tmk NONE
LOY33_RS18015 4010537 .. 4010555 -  -8.1  -3.69094   AATGGAGGATCGAAA             GGCCAGC TCAAC GCTGACC             CGGCAACAGGGCCCA  66 14
LOY33_RS18010 4009331 .. 4009349 -   -11  -4.58283   TAACTTGCGCAAAAA             TGCACGGA TCA TCCGCGCA             TGCCTATGTTTCTTG  93 388
LOY33_RS18005 4008569 .. 4008579 -  -3.2  -4.07687   ATCGGGCCTGCAAAA                 CCTG ACT CAGA                 AATCAGTTTTTTGCA  58 84
LOY33_RS18000 4007514 .. 4007531 -  -6.9  -4.18018   GCCGGTGACGGAAAA             CCGGCGA ACAG CCGCCAG              ATGCAGGTTTTGCGC  71 58
LOY33_RS17995 NONE
LOY33_RS17990 4006236 .. 4006251 - -11.8   -4.6856   GAAATACTCGAAAAA              CCCGCC TTTT GGCGGG               TTTTTTCGTTTTGGT 100 86
        uvrB 4002538 .. 4002550 -  -3.3  -3.55444   GCTTGACCCGCGAAA                GGCCC GTC AGACC                GTGAGCAGTCGCTCA  49 19
        gltX 3998145 .. 3998159 - -12.8  -3.28712   CTCGCCCTTGCAGAA               GCCGGC CTT GCCGGC               GAAACAGGCGCTGCG  79 101
LOY33_RS17955 3997800 .. 3997824 -  -8.6  -2.78715   AACCTTCTTACCACA          CAACCCGGTT GCTGG AACCCGGTTG          AACCCTGAGTTGTAT  58 63
LOY33_RS17950 3997707 .. 3997730 -    -3  -4.08945   ATCACTTGTGTAAAA          CTGGCGTCCC CTAG GGGACTCGAA           CCCCTGTTACCGCCG  58 3
LOY33_RS17945 3997525 .. 3997546 -    -3  -2.79796   TCCTAGGCCACTAGA           CGAAGG GGACTTGTAA CCTTCG            TGCAGGCTCGCTTTC  41 58
LOY33_RS17940 3997409 .. 3997433 - -13.7  -5.43553   AGGGAAAAAACAAAA          GGCTCATTCAA TAA TCGAATGAGCC          TTGAAATCCCGCAGA 100 51
LOY33_RS17935 3996766 .. 3996780 -  -4.2  -2.68434   CTCCAGATCAGATCA               CCGC GGACTTG GCGG               CACGCAACACACGGT  42 3
LOY33_RS17930 NONE
LOY33_RS17925 NONE
LOY33_RS17920 NONE
LOY33_RS17915 3993823 .. 3993840 - -12.7  -5.24531   ACCGGGCACAAAAAA             GGGCACC CGAA GGTGCCC              TCTTTCACTCAGCCC 100 45
        leuC NONE
        leuD NONE
LOY33_RS17890 3986453 .. 3986464 -  -7.2  -3.19668   CATCATTCAATTCAA                GCGG TGCG CCGC                 ACTGGCGTACCGGGG  56 46
        leuB 3985305 .. 3985340 -    -9  -4.08394   ACACCTTCGCTAAAA   GTGGGCCGCCGCCTGG AAGAAA CCAG-CGGCGGGCC-C    GAGAGATTACAGATT  75 32
         asd 3984121 .. 3984147 - -14.5  -5.31275   GGCCACCACAAAAAA        GCCCCCTGCGTC GCAA GACG-AGGGGGC         CTGTTCTACCGCGCA 100 48
LOY33_RS17875 3982888 .. 3982898 -  -2.4  -4.86939   GAAGAAAGTGAAAAA                 CCGC CGT GAGG                 CATTTGACTGGCATG  70 138
LOY33_RS17870 3979915 .. 3979941 - -18.1  -2.86271   CGCGGATTATAACGA         CAACGGCAGCC ACGAG GGCTGCCGTTG         GCCTTTCAGGTGGGC 100 43
        truA NONE
LOY33_RS17860 3978210 .. 3978230 - -12.5  -3.60792   TCGTCAACCTGTAAA            GGCGACGCC GGT GGCGCCACC            CGGTAATTTCGATCG  81 130
        accD NONE
        folC NONE
LOY33_RS17845 NONE
LOY33_RS17840 NONE
        purF NONE
LOY33_RS17830 3971774 .. 3971790 -  -5.7  -2.80113   GACCAGTCGATCACA              GCGCCGC CAG ACCGCGC              GCCAGGTCGGCCTGC  47 4
LOY33_RS17825 NONE
LOY33_RS17820 NONE
LOY33_RS17815 3970560 .. 3970575 -  -5.4  -3.59979   GCTTCGGACCTCAAA              CCGGTT GTTG AACCGA               TCTGGAGAAAAGTGG  55 38
LOY33_RS17810 3970357 .. 3970372 - -10.4  -5.64274   GCAGGCACAAAAAAA              GCGACC CTAA GGTCGC               TTTTTTTGTTGCTTC 100 69
LOY33_RS17800 3967144 .. 3967154 -  -2.4   -3.6943   CAGCGAAAATTACAA                 GCGC TCA GCCC                 ATTGAGATAAACGTA  51 69
LOY33_RS17785 3963427 .. 3963445 -  -8.1  -2.73364   CCCCCAGCTCAAGGA            CCAGCCGC AGGA GCGGC-GG             AGATACTGATGTAGA  54 0
LOY33_RS17780 3962236 .. 3962266 -  -3.8  -3.53012   CGCTTTTTCGCCAAA       CCATGGCCAGTGCG GGC CGCAGTTGGCGTGG       CCGCCCTTGCGGTCG  51 110
LOY33_RS17770 3960951 .. 3960967 -  -9.3  -3.37344   GGGGCAGTGAACTAA              CGCAGGC TTA GCCGGCG              ACCGGGGTGCGCCAG  67 16
        vgrG NONE
LOY33_RS17760 3953163 .. 3953173 -    -4  -3.41454   ATAAACCACCTAGAA                 CAAT GGA ATTG                 AAACAGCGGGGCTGG  49 9
LOY33_RS17755 3952823 .. 3952833 -  -3.2  -3.65426   TCAGAAACCTCCAAA                 CCAC ATG ATGG                 CTTCCGATCCATATG  52 42
LOY33_RS17750 NONE
LOY33_RS17745 3950333 .. 3950346 -  -4.5  -3.15579   TTAAGGCCGGATCAA               GC-CGC GCG GCGCGC               AAACGGCAGCGTCAT  47 42
LOY33_RS17740 3949663 .. 3949696 -  -5.2  -3.10641   GAACTGATCACGGAA    TGCGGGCGCCTCGCTG CGTG CAGCG-GG-GCCCGTC     GGTTATCTGTGAGGG  49 127
LOY33_RS17735 3947557 .. 3947587 - -13.9  -3.29263   ACAGGCTCGGCAGAA       CGGGAGCGCGCAG TCTAC CAGCGCACCCCCG       CCACCGCTTTACAGC  82 34
LOY33_RS17730 3946605 .. 3946636 -  -6.6  -3.28712   CGTGGTCCGCGATAA      CACCCTGCTGC-GCA TGC TGCCGCAAAAAGGTG      ACTGACTAGGCGAAC  54 31
LOY33_RS17710 NONE
LOY33_RS17705 NONE
LOY33_RS17700 NONE
LOY33_RS17695 NONE
LOY33_RS17690 NONE
        pepN 3937347 .. 3937374 - -14.8  -5.31275   CTTCATCATAAAAAA        GGGGGCTGCCCC GAAA AGGCCAGCCCCC         TGTTCAACCTGCCCT 100 46
LOY33_RS17680 NONE
LOY33_RS17675 3933741 .. 3933762 -  -5.1   -4.2558   GACCCGCGATGAAAA           CGACGCAGTG TGT CAGTGCG-CG           AAAATCGACTTGCTC  67 16
LOY33_RS17670 NONE
LOY33_RS17665 3932183 .. 3932227 -  -9.9  -2.64155   CGTGGTTCAAACCTA CGCCGCTGCCGGCGCACTGAA AAA TTCATTGCGCCAGTAGCGAAT ATCAAGGCGATTGAT  60 44
LOY33_RS17660 3931487 .. 3931532 -  -8.4  -3.72695   AGGTGCTGGAGGAAA GCCTGCAGATCATGCACTGGGC GCTG GCCC-G-GCATGATCCGCAAAA CTGGGCGCTGCGGGA  65 438
LOY33_RS17585 3909628 .. 3909647 - -16.4  -4.64861   CCCCGCCAAAAGAAA            GCCCCGGC ACAG GCCGGGGC             TTCTTTTTACCTGCT 100 47
        ppsA 3906118 .. 3906144 -  -6.5    -5.252   TACTTGCACAAAAAA        GGGCGAG-CCCA TCAC TGGATCACGCCC         TGAAAATCCGTTGAA  90 88
LOY33_RS17570 3905080 .. 3905093 -  -9.5   -3.5485   CACTGAAAAGACGAA               GCCGG CGCA CCGGC                GTTTAACCAAGGCTA  69 38
        rraA NONE
LOY33_RS17560 3903433 .. 3903443 -  -3.2  -3.34894   AATGTCTGTCAAAGA                 CGAG ACG CTCA                 TAGGGCGGGTCACAT  47 85
LOY33_RS17555 NONE
LOY33_RS17550 NONE
        sigX 3901573 .. 3901593 -  -5.4  -2.72344   GGTGATTGTTAAGTA           GTCCCACCA AACC CGG-GGGAC            AACTCGTCGACAAGT  47 82
LOY33_RS17540 3900453 .. 3900480 -   -20  -3.67588   CAAATCGCAGGCAAA        GAAAAGCCCGGC CGGA GCCGGGCTTTTC         TCAAGCGTCAGACCA 100 42
LOY33_RS17535 3898933 .. 3898953 -  -7.5  -3.33492   GCAGCGAGCGCATAA            CCGGCAGAA CGA CTCTGCCCG            GCCTCAGCCGAGGCC  58 389
       rlmKL 3896083 .. 3896097 -  -7.8  -2.73542   GGCAATTCTCAACGA               CCCCAA ACC CTGGGG               CGCCTCGGCAGTGCT  51 196
LOY33_RS17515 3894124 .. 3894146 - -16.3  -3.23452   AGGGGTAGAACGCAA           GCGGCAGCC ACCAG GGCTGCCGC           TTTGACGAGGTATCA  89 38
LOY33_RS17470 3883287 .. 3883297 -  -2.4  -3.05963   ATCGGCATGTGAACA                 CCCC GCT GGCG                 ACGCTCAGCTCAGAA  41 30
LOY33_RS17465 3882738 .. 3882749 -  -4.4  -3.40371   CAGTGTATGAATGAA                CAGT ACTC ACTG                 CAACCCCGGCAGGTA  51 20
LOY33_RS17460 NONE
LOY33_RS17455 3881144 .. 3881164 - -11.1  -3.05816   GCACGGGTGATGGAA            GCCGACCAG GCG CTGGTGGGC            ATCAGCGAGGCGGTG  62 288
        rlmM 3875432 .. 3875450 -    -6  -3.05384   TCGGTGTTGATTGAA             GGCCTT GCCGGCG AAGGCC             TCAACGCGGTTTCAG  52 26
        tusA 3875125 .. 3875154 -  -2.7  -3.06796   GCGCAGCGCACGCAA       GCGCATCCGCCAGC AGC GCCGG-GGTTAGGC       GAGCTTCTTGCGGAT  41 20
        pdxB 3872361 .. 3872378 -  -9.8  -3.54408   CCCTATTCAAATCAA             CCCGGC CCTGGT GCCGGG              TTTTTTATGCCTGGT  69 111
LOY33_RS17415 3870047 .. 3870068 - -14.5  -5.75945   ACCGGGCAAAAAAAA           GCTGCCATC GAGC GATGGCAGC            AAACTGCATTGAGCA 100 119
LOY33_RS17410 3868276 .. 3868315 -  -8.5  -3.28712   TTTTGCTGGCGACAA  TCCGCCACATTGCCCGAC ATAAA GGCCGGCAG-GTGGCGGA  TTTCCCCCGGTCAGG  63 36
         mqo 3866241 .. 3866270 - -22.3  -3.88787   CCAGATCGGCAGAAA       CCACAAAGCCCGC TTTT GCGGGCTTTGTGG        TTTCTGGCTGTACTG 100 126
        moaB NONE
LOY33_RS17385 3863429 .. 3863445 -    -5  -3.14931   GGTATGGCTGAGCAA              CCCGGC CGTGC GCCTGG              CGGTGGTCGGACATG  47 481
        yegS 3859743 .. 3859775 -  -4.8  -3.24747   CGCCCAGAGCAGCAA     GCC-CGAGGCCGTCG AGAA CCACAACCTCACGGC      GCGCCAGCTGGAAAT  49 199
LOY33_RS17350 3856112 .. 3856127 -  -3.2  -3.96148   GCTCCGGATGATAAA              GGCGCA AGCT TACACC               GAGGGCCGGGCAACC  58 64
LOY33_RS17345 3854991 .. 3855025 -  -5.5  -3.28712   CTCGGCCGCCTACAA    CGC-CGGCCCCGGACG CGTG CGCCAGTGGCTGCGCG     GCGCCGATCACCTGA  51 287
LOY33_RS17335 3851094 .. 3851124 - -21.3  -2.64616   GGCCGACTGATACCA       GAAGGCCCGCTGT TGGAC ACAGCGGGCCTTC       TTCATATCAGCTGTC 100 32
LOY33_RS17325 NONE
        fadB NONE
        fadA 3846271 .. 3846289 - -13.1  -5.54079   GCAAAAAGCAAAAAA             CCGGGGC ACAAG GCCCCGG             CTTCCGACAACGAAA 100 44
LOY33_RS17310 3845911 .. 3845930 -  -7.8  -5.54338   TAACGAAAATAAAAA            CACGGCAG GTAC CTGACGTG             GCACCGCTATATATA 100 72
        topA 3843220 .. 3843248 -  -8.8  -5.88471   CATGACTAAAAAAAA        GGCTGCGTCCAG GATCA CCAGATGCAGCC        TCTTGTAGCCGATTC 100 47
LOY33_RS17300 3842363 .. 3842376 -  -2.3   -2.7566   ACGCAAGCTGAATCA               CCGCA GGCG TGAGG                CTCAACCGCCCTTGC  39 27
LOY33_RS17295 3841738 .. 3841756 -  -8.8  -3.72576   CTGTTCTCCAGGAAA             GGCCGGCA TTG TACCAGCC             ACTGGCAGGATCAGC  69 36
LOY33_RS17290 3841016 .. 3841032 -  -7.9  -4.07568   TGCCGCGGGTCAAAA              CCAGGCA GCC CGCCCGG              CAAAGCAACAAGCCG  69 473
LOY33_RS17275 NONE
LOY33_RS17270 NONE
        nagZ 3837580 .. 3837595 -  -4.6  -3.52073   GTTGCAACAGGAGAA              GGCAGC GCTG GCTGCA               GGCTTGCTGGAGGGG  52 207
LOY33_RS17245 3829326 .. 3829345 - -11.4  -5.86332   TGAAGCCAAAAAAAA            CGGGAACC CGCA GGCTCCCG             TTCTTTCAACGCAAC 100 48
LOY33_RS17240 3828121 .. 3828149 - -10.9  -3.21593   TACTCCTTCAGAACA        GGCCCGGACGCCA GAT TGACCTCCGGGGC        TACATCATGCCGCCA  71 166
        sthA 3826716 .. 3826731 -  -4.6   -5.0133   GAGCCGCTCAAAAAA              GCCGGT TGAG ACCGTC               GTAGGCGGCAACCCG  80 2
LOY33_RS17220 3823993 .. 3824005 -  -3.3   -3.3785   CCAACTCACTCATAA                CGTAG CGC CTCCG                CAGGCTGGGTGCGCG  47 3
        lolD 3823246 .. 3823286 - -10.4  -4.90778   CCCAGGTAAAGAAAA GAG-ACAAGGGGCCCGCCA TGCA CGGCGGGCCACCTGTACTG  CCAGGTCAGATCGAA 100 31
LOY33_RS17210 3821857 .. 3821884 -  -6.3  -3.02144   CGACTTGCCGGAACA        CAACGC-AGCCC TGTAG GAGCCGGCGTTG        CCGGCGAATCGGCGC  52 116
LOY33_RS17195 NONE
        queF 3818246 .. 3818267 -   -13  -4.32046   GCGGCAAAAACGAAA           GCCCCGTC ACACTG GACGGGGC            TTTTTCGTTACTGGC  93 33
LOY33_RS17175 3816292 .. 3816334 - -18.7  -3.07043   GCGATGAGCTGAACA GCAGGCATGAAAAAGGCGGC CATG GCCGCCTTTTTCATGCAT-C ACGATCAGAAATCGT 100 30
LOY33_RS17165 NONE
LOY33_RS17160 3813703 .. 3813716 -  -5.9  -3.87075   ATGATTCGTCACAAA               CGCGG CGCC CCGCA                CCTGTGGCAGATCAC  62 364
LOY33_RS17110 3804735 .. 3804753 -  -6.6  -3.30124   CGGCATCCGCCACAA             GCCGCAGA CCA CCTTCGGC             AACGTCAAGGCGGAT  54 66
LOY33_RS17100 3802635 .. 3802647 -  -4.1    -4.208   TGGCAAAACGAGAAA                TGTGA AGG CCACA                GGGTAGCAGGCCTGA  62 490
LOY33_RS17090 3800746 .. 3800787 - -16.1  -3.05384   GGCTGTGGGATTGAA CGCCAGCAAA-CTGGCTT TGTGCAG AAGCCAGCCTTGCTGGCG ATGCCCGGCTACGCC  88 122
LOY33_RS17030 3788319 .. 3788356 -  -3.4  -3.99678   ACGCTCAGAAGCAAA   GCATCGCGGGCC-TGCA CGACC TACACGGCGGGCGATAC   CTGTGCCGATGCCGA  58 8
LOY33_RS17025 NONE
LOY33_RS17020 3786604 .. 3786614 -  -6.8  -3.27475   GGGTGGAGCACAACA                 GCGT GGT ACGC                 AGCCTTGCCGCGACC  56 156
LOY33_RS17015 3784090 .. 3784109 -  -3.4  -3.05384   GGCGCGCCGACGCAA            CCCGTTGC GCCG GCATTGGG             ACCGCCTGTGGGCCG  42 136
LOY33_RS16985 NONE
LOY33_RS16980 3776831 .. 3776852 -  -9.3  -3.38812   CGGTGGTGAAGAACA           CGGCGCCGC AGTT GTAGCGCCG            GCCCTGCAGGAGCCG  67 70
LOY33_RS16920 NONE
LOY33_RS16915 3765683 .. 3765706 - -12.4  -4.06055   AGCTTTTAAAGCAAA          GGCGCCGGAT TTTC ATCGGGCGCC           TTTTAGAATATGGGG  86 36
LOY33_RS16910 3765516 .. 3765530 -  -8.5  -5.42514   CCAGAAACGAAAAAA               GCCGC TCAAG GCGGC               TTGTTCCGGGCTTCA 100 74
LOY33_RS16895 NONE
LOY33_RS16890 NONE
LOY33_RS16885 3760184 .. 3760196 -  -5.5  -2.93703   AGAAGCAGGCACACA                CTCAG CAG CCGAG                CGCTCATTGCCCCGC  48 29
LOY33_RS16880 NONE
LOY33_RS16875 NONE
LOY33_RS16870 3757151 .. 3757163 -  -6.9  -3.04144   CCTTCAGCGTGAAGA                CCGCC CAG GGCAG                CGTCCTCGCGCTGGG  51 457
LOY33_RS16850 3753607 .. 3753624 - -10.5   -2.7535   CTTTTCAACACACTA             CCGCGCC TCAG GGCGCAG              CATCTTCAATTTCGT  63 15
         tig 3751986 .. 3752016 -   -12  -3.02511   GTCATGTCTTGAATA      CGCACAAGCCAGC GCGAAG GCTGGCTTGTG-G       TGTTTTCCTACAAGA  73 49
        clpP NONE
        clpX 3749877 .. 3749901 - -12.2  -4.34402   TCTGCGACAGGAAAA         GCAAAGGGGCC CGTA GGCCCC-TTGC          TGGTTTGCTGCCGTC  93 48
         lon 3747280 .. 3747292 -  -3.4  -4.43879   AGTATGTAATGAAAA                GCAA AACGA TTGC                CGGGTGGCCCACCGA  66 108
LOY33_RS16825 3746828 .. 3746847 - -13.6  -4.38927   TCCTGATAGAAGAAA            GGCGCATC CGAG GATGCGCC             TTCTCGTAACTGGCG  95 134
LOY33_RS16820 3744842 .. 3744871 - -20.1   -5.1485   CAACCAACACAAAAA       CAGAAAGGGCCGC ATCA GCGGCCCTTTCCG        TTTACAGCAGCATCA 100 42
LOY33_RS16775 NONE
        rnhA NONE
        dnaQ NONE
LOY33_RS16760 3729504 .. 3729552 -  -8.7  -3.10796   GGTGAGCACGCAACA GTTGCGGTGAAGGCTTCGCCGGC ATT GGCGGCGAAGCGGCCAGCACAAG CCATCCCTCATTCGC  60 33
LOY33_RS16750 3728368 .. 3728400 -  -6.8  -3.05844   GCCGTGAGTGTAAGA     GGCGCCG-CCGCGTG CTGG CTAGCGCTCGGCGCC      GTGCTGGATGACCAC  54 11
LOY33_RS16745 NONE
LOY33_RS16740 3727039 .. 3727051 -  -2.6  -3.39895   GCCTTCATCAACGAA                GGCC ATCTG GACC                GGCACATCCGCCGCA  46 351
LOY33_RS16730 3725062 .. 3725092 -  -3.3  -4.67353   CGATGCAGTCAAAAA      GCCATAA-C-GCAGC CGA GCCGCCGATTCTGGC      CGACTCTGTAGGAAA  69 71
LOY33_RS16725 3723993 .. 3724020 -   -20  -2.59683   AGCTGAGGGGATAAC        GGTGCAGCCTTG ACGC CAAGGCTGCACC         TGAAGATCACTTGAC 100 32
LOY33_RS16705 NONE
LOY33_RS16700 NONE
LOY33_RS16695 NONE
LOY33_RS16690 NONE
        rbsK NONE
        rbsD NONE
LOY33_RS16675 3713525 .. 3713541 -  -7.9  -2.63596   GTGCAGGGTACATCA              GGCGGAC TCT GTACGCC              CTCTTCGCTGGCAAG  53 487
LOY33_RS16665 3713101 .. 3713121 -    -9  -4.56597   TTTTGGTTGCAAAAA            CGTCCCAG TCTGC CTGAGACG            TGCTCGTCAGGGAAA  86 78
LOY33_RS16660 3712652 .. 3712667 - -10.4  -5.65513   GACGAATTAAAAAAA              CCCGTC CTTG GACGGG               TTTTTTTGTGCCTGC 100 71
        thrS NONE
        infC 3709086 .. 3709117 -  -2.9  -3.53733   TTCAGTTGATAAACA      TAACCGCAAGGCC TGCCGT GCCCTGGTGGTTA       TTTCTTTTTCTTGGG  49 23
        rpmI 3708869 .. 3708881 -  -9.1   -2.7339   CAAAAATTAACGAAG                GCGCA GCA TGCGC                TCGACTTTTGCAACG  58 4
        rplT 3708388 .. 3708417 - -16.6  -4.61199   ACTCCAGATACAAAA       TAGGGGAAGAGC TTACAG GCTCTTCCCCTA        TCTATGACGTTTAAC 100 82
        pheS NONE
        pheT NONE
        ihfA NONE
LOY33_RS16610 3704258 .. 3704274 -  -2.3  -2.71681   TAAGCTTTTGAATTA              TGGAA GCTTTTT TTCCA              AAATTCGTGAAACGG  39 47
LOY33_RS16605 3704080 .. 3704095 - -10.4  -5.04601   CGCAGAAATGAAAAA              GCCACC CGAA GGTGGC               TAAGTCATTGAAATA 100 43
LOY33_RS16585 NONE
LOY33_RS16580 NONE
LOY33_RS16575 3699469 .. 3699494 -  -7.5  -4.66537   CTGCGCAACATAAAA         TTGGCAGGATG ATTA CATCCTGCCTT          TTTATGCCTCAATGT  79 27
LOY33_RS16565 NONE
LOY33_RS16560 3695959 .. 3695981 -  -7.7  -4.81551   CACGCACATGAAAAA           GGCCATCCC TTTCG GAAATGGCC           TTACTCACTGAATAT  87 254
LOY33_RS16550 3693675 .. 3693700 -    -9  -4.07568   GTCGGCCTGTCAAAA         CCGGTCGTTG AATTGG CAACGACGGG          GGGAGCCTAGTCGGC  75 175
LOY33_RS16545 3693233 .. 3693243 -  -8.2  -2.71731   TTGACCCGCGAACGA                 CCGC AAC GCGG                 TCGCATAGCACCCAA  54 57
LOY33_RS16540 3692288 .. 3692310 -  -4.7  -2.78384   TGCTCGCCTACGAGA           CTGCGCGGG TGTTG CTGGCGCAG           GGGGTGCGCAAGCCC  43 499
LOY33_RS16485 3669845 .. 3669889 -  -9.8  -3.02144   GCAGCGGGTTCAACA GCGCGCAGGTGGCCGGCAGC CTGGC GCTGTCGTCGACCTCCGCGT GCAGCTCGGCCACCC  60 304
LOY33_RS16470 3663915 .. 3663955 - -28.4  -5.63645   TGAAAACACAAAAAA  GCCGCCCCGGGCCGATCG ATGCG CGATCGACCCGGGGCAGC  CTGTAGGCAATGGCG 100 43
LOY33_RS16465 NONE
LOY33_RS16460 NONE
LOY33_RS16455 NONE
LOY33_RS16450 3659969 .. 3659989 -  -3.9  -2.86838   CATAGGCAAACACCA            CCACGCCGA TCA TCAGCATGT            CATTGCCCCTCCACC  44 25
LOY33_RS16445 NONE
LOY33_RS16440 3658458 .. 3658468 -    -4  -4.40804   TATCAGCCTATAAAA                 CAAT GTT ATTG                 CGACACTTCAATCTG  65 33
LOY33_RS16435 NONE
LOY33_RS16430 3656939 .. 3656957 -  -3.1  -3.86015   CACCGCGGCTACAAA            GC-CACCC GCGC GGATGCGC             AAGGCAACATCCTGA  56 381
LOY33_RS16415 3651493 .. 3651512 - -12.1  -3.92869   GTAGCGATGCAGAAA            GCCCGCC GTGACT GGCGGGC             TTTTTTGTGGGGAAG  83 53
LOY33_RS16405 NONE
        aldA 3646588 .. 3646638 -   -40  -2.52464   TTGCTGTGCAACCCA TCGCGGGTCGAGCCCGCTCCCACA GGC TGTGGGAGCGGGCTTGACCCGCGA TGAGGCCCTAACAGG 100 52
LOY33_RS16385 NONE
LOY33_RS16380 3642214 .. 3642272 - -27.8  -2.52795   AAGGCGGCGAACTGA CGGGCCTCTTCGCCCGCAAGGCTGGCTCC TGCA GGAACCAGCCTTGCGGGCGAAG-G-CCC- CGGCAACTACACGAT 100 32
        glcC NONE
        treS 3632580 .. 3632590 -  -4.6  -3.65902   GTTACCGCATGCAAA                 CGCC TAC AGCG                 TCGCCACACTGCTCA  56 18
LOY33_RS16340 NONE
LOY33_RS16335 3631015 .. 3631026 -  -5.8  -3.96148   CTGGGCTACCAGAAA                GTCG ATGG CGAC                 ACACCGTTCGACTAT  63 434
LOY33_RS16300 NONE
LOY33_RS16295 3623666 .. 3623692 - -12.2  -2.71011   ATGGCGCCGCAACTA         CCCCAGCCTGGC CAG ACCCGGCTGGGA         GTCCTGGTTTCTGGT  65 263
LOY33_RS16285 NONE
LOY33_RS16280 3619376 .. 3619400 -  -4.1  -3.57144   CGCCGGACGTCGAAA          GCGCCCTGCAG AAA CTGCATGCCGA          CCCGAGCATCGCCCT  51 264
LOY33_RS16165 NONE
LOY33_RS16160 3595472 .. 3595507 - -10.5  -4.73388   AACTTGCATGAAAAA   GCCCCACACACCGCAGC ACAG GCTG-GATG-GCGGGGC    CTCTTCGGCGTCGTG  95 42
LOY33_RS16155 3594891 .. 3594908 - -12.7  -4.74504   AGGCGAATTGAAAAA             GGCGACC TTCG GGTCGCC              TTTTTCATGCGTGCC 100 122
LOY33_RS16145 3592492 .. 3592508 -  -2.1  -3.64487   CCACAGCTTCAAGAA              CATCGGC CAG GACGAAG              CCGAGATCATCAGCG  51 130
LOY33_RS16100 NONE
LOY33_RS16095 3581435 .. 3581457 -   -12  -3.21218   AGCCTGCAGCAGCAA           CCCTCGGC GCAACTG GCCGAGGG           CGTGCTGGGTGGTGA  75 496
LOY33_RS16085 NONE
        ppnN 3578488 .. 3578508 -    -9  -3.18768   CAGCAGAATTGAACA           CCGCG-TCG CCGG CGATCGCGG            GTCAAGCCCGCTCCC  63 89
LOY33_RS16060 3574623 .. 3574654 -  -3.6  -3.28791   AGCCCGCTCCCACAA      GTACTGCGCCGGCC CCAG GAACATCGCAATAC       CTGTGGGAGCGGGCT  47 77
LOY33_RS16045 3570514 .. 3570528 -  -4.2  -3.72893   CACTGGGTTACGAAA               GCACGT TTG ATGTGC               CCGGTTACACGGTGT  54 293
LOY33_RS16010 3563396 .. 3563407 -  -2.2  -2.79796   GGTCAGCGCATCACA                CGCT CAGC AGCA                 GGAACTCGCGCTCCC  39 9
LOY33_RS16005 NONE
LOY33_RS16000 NONE
LOY33_RS15995 3560242 .. 3560255 -  -3.8  -4.10925   ACATACTGCTGAAAA               CAGG CTGCGC CCTG                CTTACCTGCCAATCA  62 38
LOY33_RS15990 3559203 .. 3559236 -  -7.2  -3.22774   CACAGTGAGCATCAA     GTCCCCCAGCGGGC GGTACA GCCTGGCGGGGGTC      AAGGTATTGCCGGCA  54 478
LOY33_RS15965 3554753 .. 3554780 -  -9.8  -4.70169   GCACACGCAACAAAA        TTTGAGGGGAGC CCAG GCTCCCCTCAGT         GCTTGCTGCCCTACT  87 36
LOY33_RS15945 3550382 .. 3550431 -   -13  -3.02144   GCAGCGTGTCGAATA CCCTCGCGGATCATGCCCGCCCCAC CCG GTCAG-CAGGC--GATCCGCGAGGG CATCGACGCGGGCTC  76 39
LOY33_RS15925 3546122 .. 3546132 -  -2.4  -3.02461   GAATCGTCCTGAATA                 CGTC ATA GGCG                 CGGATGCTACCAGAG  41 87
LOY33_RS15920 NONE
LOY33_RS15915 3540643 .. 3540700 - -33.7   -2.9914   CACGCGCTAGACACA CCCTGCACACAACAACGCCAGGCGCGA GCGG TCGCGCCTGGCGTTGTTGTGTGCGCAG CCCTTGACGGGCCGT 100 42
LOY33_RS15905 3539557 .. 3539595 -  -5.9  -3.01712   CGCGGTGCTGGAACA  GCCGGTTTCACGCTAGGCC AAC GGCCG-G-GTGACGCCGGC  CGCAGCCTCGCAAGC  48 43
LOY33_RS15895 3536567 .. 3536582 -    -4  -3.05844   TGCGGGATCTGAATA              CG-TAGC CAC GCTATCG              CGGGTCAAGCCCGCT  45 99
LOY33_RS15885 3533713 .. 3533731 -  -4.4  -3.28712   GGCGTTCGGCGACAA             CCGCCTGC CCG GCATGCCG             ATGCACTACTACCAG  49 364
         icd 3503306 .. 3503337 - -19.4  -2.77701   ACCCCAGGAACACCA      GGGCCGGCCTGCCC TCTC GGACAGGCCGGCCT       TTTGCTGCCCGCTTA 100 38
        clpS NONE
        clpA 3500022 .. 3500053 - -18.8   -2.9348   GCTAAACGCTACACA      CAAGAACGCCCGGC CAGT GCCGGGCGTTTTTG       CGTGCCTGCCTGAAA 100 114
        ftsK 3495401 .. 3495419 -    -6  -2.59569   GGCGGAAACCAACAG             CATGCG AATCAGG CGCATG             GAAATCCTCGTTGCA  48 90
        lolA NONE
LOY33_RS15720 NONE
        crcB 3493086 .. 3493100 -  -2.8  -2.57132   TCGCTGGTTCAGAAT               TTGGTC AAG GACAAA               CCGGCCCAGGTGGCG  40 4
        serS NONE
        cysG 3490333 .. 3490376 - -16.9  -3.14132   CCCCTTCGCCAGCAA GGCTGGCTCCTGCAGTGGGTC GCGT GAACC--TGCAGGAGCCAGCC TTGCTGGCGAAGCTG  89 44
LOY33_RS15660 3484265 .. 3484282 - -11.3  -4.84529   TCAGAAACGCAAAAA             GCCCTGA ATAA TCAGGGC              TTTAGAAGTGGCGGA  95 34
LOY33_RS15655 3482244 .. 3482255 -  -7.2  -3.57406   CGGGTACGAGAAAGA                GCCC ACTT GGGC                 GACCACAAACACGCC  60 355
LOY33_RS15630 NONE
LOY33_RS15625 NONE
LOY33_RS15620 3475451 .. 3475482 -  -8.1  -3.06261   CTTCAAGGGGCAATA     CTGCAACCT-CGCCG CCCA CGGCGCAGGCTG-AG      GAACCAGGGGCCTGG  57 46
LOY33_RS15600 NONE
         ggt 3468536 .. 3468550 -  -7.1  -2.93182   CAGGCAAAAAACTCA               GTCGC CCAAC GCGAC               GCCCTCGCGACGTGG  53 8
LOY33_RS15580 3467755 .. 3467772 -  -5.5  -3.36557   AAGCAGCGCAAGCAA             CAG-GCCG CGC CGGCGCCG             GTGCCCGCGTTCAGC  53 242
LOY33_RS15570 3466990 .. 3467021 -  -4.3  -2.67981   ACTCCATGAAAGGGA      CCGGCAGCGA-GCC TAGTG GGCGTCACGGGCGG      GCGTCAATACGCGAC  42 90
LOY33_RS15565 3466334 .. 3466357 -  -7.4  -2.78384   TTCCGTTCGACGACA          TGGACGAGGCG ATT CGCCTGG-CCA          ACGACAGTGCCTATG  51 331
LOY33_RS15555 3463818 .. 3463832 -  -7.8  -3.28791   AGGTGCGGGTCAGAA               CACCTG CAT CAGGCG               TACGTTGAAGCGGTC  59 5
LOY33_RS15550 3461660 .. 3461706 - -18.7  -2.50016   CCGGAGCACCAACAC GCACCCGACCGGCGGCCTGTG ACGTA CACAGGCCGCCGGTGCGATTC AAGGTGCGGCTTTGT  95 24
LOY33_RS15545 3459626 .. 3459656 -  -7.7  -3.09015   CGCACACCCAGGGAA      GCTG-TTCAGTTTG TAAT CAAACTGACGCAGC       CCTTGTGGTACGTAG  57 89
LOY33_RS15540 3458076 .. 3458109 -  -3.2  -3.32963   ACCCTGATTGCAGAA    GCCGACGACCTGGCGCA GTT TGC-CCAGGT-G-CTGC    CGCTGCTGGAGCAGA  46 410
LOY33_RS15455 3440879 .. 3440889 -  -8.2  -2.50816   TTGTTATGCACGAAG                 GCGC AAG GCGC                 ACCGCGCACAAACAT  53 124
LOY33_RS15450 3439019 .. 3439038 - -16.4  -4.29106   GTGTAGATGAACAAA            CGCCCCGG CTTG CCGGGGCG             TTTTGCGTTGGCAGC 100 192
LOY33_RS15415 NONE
LOY33_RS15410 NONE
LOY33_RS15405 NONE
LOY33_RS15400 NONE
LOY33_RS15395 NONE
LOY33_RS15390 NONE
        hcaB NONE
LOY33_RS15380 3425528 .. 3425539 -  -7.2  -3.28712   CCGGTTGGCTTACAA                CGCG CGCG CGCG                 ACTCTGGCGATAGCC  56 8
LOY33_RS15375 3424597 .. 3424613 -  -4.3  -3.61398   GGGGTCGTTGAAGAA              GTCGTAC ATT GCACGCC              CTCGTGAGCGCGGCA  51 122
LOY33_RS15370 NONE
LOY33_RS15365 NONE
        dmpG NONE
LOY33_RS15355 3419663 .. 3419705 - -14.7  -3.14132   TCCGGGCTGCATGAA TGCGTCACCGGCCAGGGCC ATGAG GGCCGAGGACGGTGACGCC ATCACCCACCCGCTG  83 64
LOY33_RS15350 3418931 .. 3418953 -  -8.3  -2.93382   GCGCACAGCCAGACA           CCCACCCGC TAGTG GCGGGCGTG           CCGTTGAACCAGAGC  56 50
LOY33_RS15345 NONE
LOY33_RS15340 NONE
LOY33_RS15335 3416800 .. 3416827 - -17.1  -4.62336   ACGCCATGTGAAAAA        GTCCTCGCGCA GCGGGG TGCGCGAGGAC         GCCTGGTGCCGATCA 100 42
LOY33_RS15330 3414641 .. 3414661 -  -9.7  -3.32844   CCTGCGATGCCACAA            CTGAAGGCA TCC TGCCATCAG            CTGTACTCCGGAATG  67 236
LOY33_RS15325 NONE
LOY33_RS15305 NONE
LOY33_RS15300 3405094 .. 3405151 - -11.9  -2.78384   CGGTGGCCGACTAGA GCCAACCGATGCCCTTGCAGCGCTC TCAGGATC GAGCGCCGCAAGCGCGGCGCTTCGC CGGCAAGGCCGGCTC  70 121
LOY33_RS15290 NONE
LOY33_RS15285 NONE
LOY33_RS15280 3401948 .. 3401960 -  -6.2  -4.65895   CCGCCCAGCGAAAAA                CCGC TGCCT GCGG                TGCGGGTGCAGGCCA  78 362
LOY33_RS15265 3400535 .. 3400569 -  -7.8  -3.07994   TGGAAGGCCAGGCAA    CCCCTGGCCTGCGCC GCTTGG AGTGC-GACCAGGGG     CGCCTGCGCCTGCGC  54 159
        gspG NONE
        gspK NONE
        gspL NONE
        gspM NONE
        gspD NONE
        gspE NONE
        gspF 3392027 .. 3392037 -  -3.2  -2.60615   AGTGCGCTTAAACAT                 GAAG AAG CTCC                 TTTCGTCGTGTTCGT  40 350
LOY33_RS15220 3390828 .. 3390855 - -17.8  -4.35524   TTCTGAAACGCAAAA        GCCGGTAACGGC GCGA GCCGTTACCGAC         GGGGTACAGCGACAG 100 54
LOY33_RS15215 3377659 .. 3377676 -  -8.3  -3.61517   AGGCTGCTGGAAGAA             GCCGGGG TGAT CCGCGGC              TACCATGCCAGCCTC  62 395
LOY33_RS15205 3376618 .. 3376646 -  -6.1  -3.12449   CTTCATGAAGAGAGA       TGCAGGGC-CTGG GCTAT CCAGCGCCCT-CA       GGGTCGTGCGCCGCC  52 117
LOY33_RS15200 NONE
LOY33_RS15195 NONE
LOY33_RS15190 NONE
LOY33_RS15185 NONE
LOY33_RS15180 NONE
LOY33_RS15175 NONE
LOY33_RS15170 NONE
LOY33_RS15165 NONE
LOY33_RS15160 NONE
LOY33_RS15155 3366393 .. 3366416 -  -8.1  -3.53012   CGGTTCGCCGGCAAA          GC-CGGCGCC TACAG GGCACCGCGC          CCCTTCAGAACCACT  62 30
LOY33_RS15140 3363006 .. 3363028 - -12.7  -2.52623   TCCTCCTTAGAACAG           GGCGCCAGC CACAC ACTGGCGCC           ACGGGGCTCACTGAG  71 33
LOY33_RS15135 NONE
LOY33_RS15130 NONE
LOY33_RS15125 3359912 .. 3359928 -  -4.3  -2.82516   GGCTTGACCATCAGA              CCGCGAA CTC CTCGCTG              CGCTCGAAGCTGTCG  43 4
LOY33_RS15120 3358926 .. 3358945 - -11.4  -2.70932   TGCCTGGCTCAAGCA            GCGC-CGGC TGA GCCGTGCGC            GGGAATTGCTCAAGG  62 235
LOY33_RS15090 NONE
LOY33_RS15085 3351536 .. 3351546 -  -3.2  -2.93492   GACTACAGATCAAAG                 CGAA AGA TCCG                 AGCGAGCCTAAACGA  42 212
LOY33_RS15080 3350633 .. 3350677 -  -2.7  -3.28712   CCTGTTGCTCGACAA TGTCGCGGTAAGCC-CGGCC GCTCAG GGCCGCGGGCTGGGGCGACA ACTGATGGCGCATGC  46 286
LOY33_RS15070 3347957 .. 3347967 -  -2.4  -3.33671   AGAGCGACCTCAGAA                 CCGC GTC GTGG                 CACTCACCCCGAACG  46 9
LOY33_RS15060 3345934 .. 3345945 -  -5.8  -3.95219   CGTAAAGTGTAGAAA                GCCT GCTC AGGC                 CTTCAAGGTTAGTCC  64 351
         zwf NONE
LOY33_RS15040 3341560 .. 3341600 -  -8.2  -3.53012   GGCGCTTGTGCCAAA GGCTGGGCTGTTGCTCCTGC ACT GCAGGAGC--CGGCCTTGCC GGCGAAGCGGCCGCC  62 45
LOY33_RS15035 NONE
        nudC 3339448 .. 3339463 -  -8.2  -3.59979   CGGCGGCACGCCAAA              GGCGCC GCTG GACGCC               GATGCGCCGATCAAG  62 374
        sohB NONE
LOY33_RS14995 3329532 .. 3329547 - -11.8  -4.72986   CAGCCCCATGAAAAA              GGCCCC TTGC GGGGCC               TTTTTTTGTGGCGTC 100 45
LOY33_RS14990 3327892 .. 3327927 -    -4  -3.76759   AGGAAGCCGAGGAAA    TCGGCGATGACGTGG CCAGCTT CCAGGTCATCGC-GT    TGAACTTCCCGGCCT  57 343
LOY33_RS14975 3324673 .. 3324687 -  -6.4  -2.53876   GGTTATGGGAATGCA               CTGCAC CTG ATGCAG               TTAAGTCCAGCAATG  48 78
LOY33_RS14960 NONE
LOY33_RS14955 3319163 .. 3319175 -  -6.9  -3.05463   ACTGTTTCGAGGTAA                CGGGC AAC ACCCG                CAGCGCCTGTCAGCC  54 35
LOY33_RS14950 NONE
         rpe NONE
        hemE NONE
LOY33_RS14935 3315922 .. 3315945 -    -8  -3.14132   GCTGTTCGCCAGCAA          GGCTGGCTCC CACA GGAGCAGGCC           TTGCTGGCGAATGGG  57 47
LOY33_RS14930 3314099 .. 3314122 -  -4.5  -3.78778   GCAGTACATCAAGAA          CCGGCGC CTGGACATCT GCGCCGA           AACCCTGCGCAACCC  58 191
LOY33_RS14910 3310650 .. 3310669 -    -7  -2.54166   GGTTGAAGTAAAAGG            GGCCGGCG CACT CAGCGGCC             GGTGAACACCGGTGC  50 17
        paaG NONE
        paaC NONE
        paaI NONE
        pcaF NONE
        paaF 3305172 .. 3305190 -   -16  -6.22691   CAAGAACAAAAAAAA             GCCCCGAC CAG GTCGGGGC             TTCGGCAGCCATCAG 100 44
        paaA NONE
        paaB NONE
        paaC NONE
        paaJ NONE
        paaK NONE
LOY33_RS14855 3300826 .. 3300841 -  -4.7  -3.27923   GGTGAACACGACGAA              CAGCA GGAACA TGCTG               ATGGCTGTCCAGTTC  49 39
LOY33_RS14845 3297990 .. 3298002 -  -3.3  -3.09273   TTGGGGCAACAGACA                TGAGG TGT CCTCC                GGTTCTTTTAAGGGG  43 46
        paaZ 3295876 .. 3295889 -  -3.8   -2.9155   CCGGCGAAGAGGACA               TGGC ACGCTG GCCA                GTCATGCCCCTTCGC  44 72
LOY33_RS14835 NONE
LOY33_RS14830 3292607 .. 3292625 - -11.7  -2.78384   TGGCGTGTGACCACA             CCGGGTG CCCCT CACCCGG             TGTGCGTCAGGCTCG  70 43
LOY33_RS14825 3291827 .. 3291837 -  -2.4  -3.58343   CTGACCAGGCGGAAA                 GCGC CGG GGGC                 ATGGTGGTAGCGTCG  48 316
LOY33_RS14815 3289231 .. 3289257 -  -4.2  -4.62872   ATCAAGGCGCAAAAA         GCGCCGAATCCG AAT CAGGGTCGGCTC         CACTAATCAAGGAGC  70 481
LOY33_RS14800 3287411 .. 3287427 -  -4.3  -4.03413   AGCCGTTTAGACAAA              GCAGTGG ATG CCACGAC              CTACGCTGCTCACTG  60 35
LOY33_RS14790 NONE
LOY33_RS14785 NONE
LOY33_RS14780 3283584 .. 3283596 -  -4.1  -2.66316   TGGTCGACGATACCA                GGATT ACA AACCC                AAATAGACCAAGGGT  42 147
LOY33_RS14775 3282681 .. 3282697 -  -4.3  -3.41222   TCTCAATCTCAAATA              CGGCAAG CGC CCTGCGG              TGGAAGTTATTGAGG  51 515
LOY33_RS14740 NONE
LOY33_RS14735 3273645 .. 3273674 - -16.5  -2.65354   GGTATTTGAAATCGA       CCTAGGGCTCTTC AGAA GAAGAGCCCTGGG        TACTAGTTGTTCCAG  85 57
LOY33_RS14725 3271596 .. 3271633 -  -9.9  -2.78384   TTGCTGCGTAGCAGA   CCTGCCAGGCGACAATGA TTG TC-TCGGCGCCTGACAGA   CCCGAACGCATTACT  61 113
LOY33_RS14720 3270237 .. 3270259 - -15.6  -2.71364   TCAGGGCGGCAAGGA           CATCGTGCGC GGC GCGCACGACG           CCTGCGTCCAGGTGC  75 154
LOY33_RS14675 3259225 .. 3259260 -  -5.2   -3.2056   AGGCAGACCCAGCAA    CTGGGGCTGGGCGCGCA GCG TG-GCGCCCGGCATCTG    GCGCCGCACCCGGAC  49 272
LOY33_RS14650 3254298 .. 3254310 -  -6.2  -2.61216   CCAGCAAGGAACTGA                GCGC CTGGT GCGC                CGCACGCCAGCTGCC  46 209
LOY33_RS14640 3252184 .. 3252207 -  -5.2  -3.06737   CAGCAACTGCGAAGA          GACCGGCAGC CTGG ACTACTGGTC           GCTGGATACCCATGA  47 218
LOY33_RS14610 3245822 .. 3245851 -  -9.9  -3.13403   CGGCGCGCATGAACA       CGTTGCGCGCCCGC TGA GCTGGCGCG-AGCG       CATCACCGGGCGTTT  62 53
        lexA NONE
        imuA NONE
LOY33_RS14540 NONE
LOY33_RS14535 3225093 .. 3225107 -  -2.1  -3.68351   GTGTGATCAGCGAAA              GT-CGC GGCT GCGCAC               ATCCAGCCCGTGCAA  51 2
LOY33_RS14525 NONE
LOY33_RS14520 3222651 .. 3222664 -  -3.7  -3.14468   GGCCAGCACAGGCAA               GGCGG TTAT CAGCC                TAGAACGTCATCTCT  45 25
LOY33_RS14515 3221064 .. 3221081 - -11.3  -4.84527   TTTAGACATGAAAAA             GGCGATC CGAA GATCGCC              TTTTTTACCCGCCGG  95 46
LOY33_RS14510 3218324 .. 3218336 -  -3.3  -3.28712   GGTGCCGTTCTACAA                CGGCT GCA ACCCG                TTGGCCCTGGAAGCG  46 412
LOY33_RS14495 3216243 .. 3216255 -  -4.7  -2.72263   ACAGCCCGGTTAAAC                CGGCG AAT CGACG                TCGTGCACCACCACC  44 7
LOY33_RS14485 3214517 .. 3214532 -  -2.4  -3.57144   TGGGCCAGGGCGAAA              CCGCCC TGCT GGGCCA               GTTCAGCCTGATCTA  48 263
LOY33_RS14475 3211806 .. 3211824 -  -2.3  -3.29511   GTCACGCCTGCAGAA            GGTCGCCG TGGC CTGCG-CC             GTGGTGGGGGTGGGG  44 471
        hppD 3208283 .. 3208307 - -15.8  -5.64274   GCAGGCACAAAAAAA          GGCCATCGAG GCATG CTCGATGGCC          TTTTTGCATACGCGC 100 46
LOY33_RS14445 NONE
LOY33_RS14440 3203376 .. 3203409 -  -3.8  -3.14132   GGGCCTGGTGACCAA    CTGGCTG--GGCTACC TGCT GGTGGCCGGCAGCCTG     TTCGCCTGTGGCCTG  45 511
LOY33_RS14370 NONE
LOY33_RS14365 NONE
LOY33_RS14360 NONE
LOY33_RS14355 NONE
LOY33_RS14350 NONE
LOY33_RS14345 NONE
LOY33_RS14340 3175299 .. 3175347 -    -3  -2.72344   CTGCACCGGCAAGGA CGCGCACCCAGAC-CCGGCCAGGC GCT ACCTCGCCGGCATC-GCCTGCGGG GTGTTCTATGTCACC  41 303
LOY33_RS14305 3165774 .. 3165786 -  -3.3  -3.53012   GTCTGGCTCCGGAAA                CAGGG TGA CCTTG                CGGTCCTGGCGGGGA  49 66
LOY33_RS14300 NONE
LOY33_RS14295 3163558 .. 3163615 -  -6.9  -3.17325   ACCCGGCAGAACAGA TG-CTGGCCTGGACGGCGGGCACGGCC GAGGAT GGCTACGCCAGCC-TCATGGCCAGTCA CTTCTACATGGGGTG  52 415
LOY33_RS14275 NONE
LOY33_RS14270 NONE
         xth 3159236 .. 3159252 -  -2.1  -3.63515   GCCGATGCGTAACAA              GGGGCTC ATC GAGCGGC              CTTGAGTTCGATCCA  47 14
LOY33_RS14260 3158439 .. 3158450 -  -2.2  -3.78953   ACGGTCATCACGAAA                CCTC GCAT GAAG                 TCATCCTAACCCGTT  51 94
LOY33_RS14255 3157982 .. 3158026 -  -5.6  -3.04144   CCTGGATGTCGAACA CGGCCACCTGCACCACTGCCA GCGC TGCCAG-AGCCCGGATGGCCG GGTGTACGAGCCTGG  47 116
LOY33_RS14245 3156783 .. 3156828 -  -6.1  -3.14051   CCATGCGCACCAACA CCTACGGCCTGCTGACTGCGCA GGT CG-GCAGCCAGCAAGCGGAAAA GAGCGTGACGGCGGC  51 431
LOY33_RS14230 NONE
LOY33_RS14225 NONE
LOY33_RS14220 3150569 .. 3150605 -  -4.3  -3.36492   CCTGGAAGCCGAGAA   GCGCGCCGATGCCCAG GCCAGG CAGGCCATCGCC-CGC    GAAGTACTGGCGGGC  51 291
LOY33_RS14210 3148258 .. 3148283 - -10.4  -4.73682   CGGCAGAATAGAAAA         GAAGGCGCGG GAGTCT CGGCGCCTTC          CTGGTTTTGTGCGGG  95 275
LOY33_RS14190 3144439 .. 3144451 -  -3.3  -3.74077   CGCCATACATCGAAA                CGCTG CTG CAGGG                GCATGCGGGGCCGGT  53 455
LOY33_RS14180 NONE
LOY33_RS14165 NONE
LOY33_RS14160 3136063 .. 3136073 -  -6.8  -3.02471   CGCCGATCATACACA                 GCCA GGG TGGC                 CTATGGAAAGGCGGC  54 43
LOY33_RS14155 3135291 .. 3135314 -  -9.6  -3.57144   GTTCGCATCGTGAAA          CTCCAGGC AGGTCAGA GCCTGGAG           TTTCGTGCAGCCCCA  69 93
LOY33_RS14150 3134017 .. 3134049 -  -7.6  -3.02144   CCAGCTCTGCGAAGA      CGCCGGCGCAGACC TGGAG GGCCTGAACCAACG      CTTGCGCGCCCTGCC  53 366
LOY33_RS14135 NONE
LOY33_RS14130 3131927 .. 3131968 - -14.3  -3.17194   ACTTTCGCAATTGAA CCCTGCCGCGTGCCGGCGCC TTA GGCACCTGC-CGCAGCCAGG TTGCCGGGGTCGCCC  83 4
LOY33_RS14115 3129476 .. 3129492 -  -5.7  -3.53811   CGCACCCTTGCCAAA              CGACCCG CGG CTGGCCG              AACTATGTCGCAACT  54 353
LOY33_RS14105 3127928 .. 3127952 -  -8.5  -3.28712   CGCGGCGGTGCAGAA          CAGCGCGGC GGGGCAT GCGGCGCTG          GGCTCGCTGTCGATC  58 179
LOY33_RS14095 NONE
LOY33_RS14090 3125166 .. 3125176 -  -3.2  -3.06183   GCGATGGTGATTCAA                 GCCA GGC TGAC                 AGTGCTCGCTTCTCC  43 11
LOY33_RS14085 3124016 .. 3124026 -  -8.2  -3.28924   CAGTTGCTGCCACAA                 CCGG TCA CCGG                 GCGCATTCCGCTGAT  58 468
        gcvA 3121622 .. 3121640 - -11.7  -3.68222   GGCCAACGCCAAGAA             GGCCAGC GCCAA GCTGGCC             CCCAAAAGCAAACCC  75 129
LOY33_RS14040 3114511 .. 3114541 - -10.5  -4.66163   AGCTCCACTCAAAAA      GGGAGGGTG-TTGC AACG GCAATCACCCTCCT       CTGTTCAACGCACGC  90 136
LOY33_RS14035 3113281 .. 3113297 -  -4.4  -3.35046   TGATCGCTCCAAATA              CCAGCA GCACT TGCTGA              AGGACAACTACCGCA  51 481
LOY33_RS14030 NONE
LOY33_RS14025 NONE
LOY33_RS14020 3110845 .. 3110882 -  -3.4  -3.03771   GGAGAGGTGCTAATA  CGCGCC-CCTGGT-GGAT AAGA ACCCTACCATCTGGCGCG   GACTCTTTTTTGCTT  43 14
LOY33_RS14015 3110277 .. 3110306 -  -9.9  -3.61902   CCTCATTACACATAA       CGGGCGAGCAGGA TCAT CCCTGCTTGCCTG        CCTAGTGCGGTTTTA  69 27
LOY33_RS14010 3109935 .. 3109947 -  -4.8  -3.38071   CAAATCCTCAAAAAT                GCTG TATTG CAGC                GCACTCAAAACACCA  51 93
LOY33_RS14005 3109268 .. 3109281 -  -6.7  -3.66178   GCGGCCAAGCCTAAA               GGATG AATC CATCC                GACTGGGCTAACGAC  61 174
LOY33_RS14000 3107788 .. 3107804 -  -2.2  -4.08767   CCCATGGGGTCAAAA              CGTAGT TCATC ACAACG              ATGGCCGCCCTACCA  56 35
LOY33_RS13995 3106815 .. 3106827 -  -4.7  -3.22388   TAGCGAATTGACCAA                CCCAG AAG CGGGG                CTTTCTAGCGGCTTT  49 107
LOY33_RS13990 NONE
LOY33_RS13985 3103256 .. 3103266 -  -6.8  -2.58544   GGCGATGCGCACAAC                 GGTC ACT GACC                 CAGCCCCTCCAGCAA  50 17
LOY33_RS13980 3101389 .. 3101436 -  -4.2  -3.29471   CCCGTAGTAGAGCAA CTGCTGCAGGCCCATGCAAGCT TGGCCC AGCTTGC-CGGGCATGCCA-AG CCCCGGTACCTGACG  47 516
LOY33_RS13970 3099770 .. 3099785 -  -3.2  -2.78384   GGGGTGTTGATCACA              CTCGCCA GGG CGGCG-G              AATTTGCGCAGCGCC  40 247
LOY33_RS13955 3096594 .. 3096627 - -11.9  -3.18264   GTGCCGATTGATGAA     TGGCGTAACGGTA GCCAACAA TACCATTACGCCA      TCATCCGCAACATGG  75 140
LOY33_RS13950 3095587 .. 3095597 -  -3.2  -3.53012   CTTTGCGGGGGCAAA                 GCAA CGT TCGC                 GTACTTATCCGACTT  49 90
LOY33_RS13945 NONE
LOY33_RS13940 3091219 .. 3091229 -  -2.4  -2.50307   CAAAGGCTCATGAAC                 GGCG CTC CTCC                 AGGGCAGGCTGGGCT  38 7
LOY33_RS13935 3089720 .. 3089741 - -13.1   -4.2679   GAAGCCGTATGAAAA           TAATCCCCG GTTT CGGGGATTA            TTTTTGCCTGATGGA  93 44
LOY33_RS13910 NONE
        cynS 3082635 .. 3082671 - -18.8  -3.64487   CCACATTTTCAAGAA   CATGGAGCCCGGCAGCC ATGC AGC-GCCGGGCCCCATG    GGTGGGGTGATCAGA 100 36
LOY33_RS13900 3082296 .. 3082313 -  -2.6  -2.84801   CATTGCGAAAGATCA             GGTCCA TGACGT TGGCCC              TCTATGATGCTGCCC  39 76
LOY33_RS13895 3081022 .. 3081057 -  -6.9  -2.70932   GCGCTGGGTGAACCA    GGTGGTGGGCGAGC GAAGTGACA GCTC-CCCACGACC    AGTCGCTTGCATCGA  51 47
LOY33_RS13885 NONE
LOY33_RS13880 3076477 .. 3076488 -  -7.2  -3.14132   TTCGGCGTGCATGAA                CGGG TCAT CCCG                 GCAGGGCGTTGCGCC  52 348
LOY33_RS13865 NONE
LOY33_RS13860 3073151 .. 3073161 -  -3.2  -3.57144   TGGCTCATGGTGAAA                 CTCC AGT GAAG                 TGAAAGGGATCAGGC  49 35
LOY33_RS13855 3072664 .. 3072683 -  -3.4  -3.18264   GTCCTGATTGATGAA            CCGCCATG ATGC CGTGCCGG             CGATTGCACCCACAA  45 54
LOY33_RS13850 3072024 .. 3072060 -    -8  -3.55444   GGTTCATCCTCGAAA   GCCTGCCTGCAATGCCC CTGG AGGCACTGCAAGCCG-C    GGCTGACGAACTGGG  60 122
LOY33_RS13840 3070623 .. 3070636 -  -2.3  -3.57119   GAGATAGTCGTCAAA               CATGC CGTG GCCTG                GGTAGCGAGGCGATC  47 7
LOY33_RS13835 3069783 .. 3069832 - -14.4  -3.53012   GCCTGTGGTTTCAAA CGGAGCGACAGCGCTCCAT-CAA TCGAC CCGCATGGAGCGCAGTCACTCCA TATAACCAAGCCCCG  88 18
LOY33_RS13825 NONE
LOY33_RS13820 NONE
LOY33_RS13815 NONE
LOY33_RS13810 3062608 .. 3062625 -  -8.4  -3.17941   ACCATAGGGCATCAA             GGCCAC GCGAGG GTGGCC              CGGATGAGGTGACAG  63 48
LOY33_RS13800 3060483 .. 3060513 - -11.1  -2.83164   TCAGCGAGCATCACA       CCGGGCGTGCC GTCGACATA GGCACCCCCGG       CTGCACCGACCTGGA  61 181
LOY33_RS13755 3054478 .. 3054517 -  -3.5   -3.1552   GCGCACCGATGAAGA CTGGTCGGCGCGCTTGCAG GCGG CGGCAAGCTC-CGG-CCAG  GGCCGTGCGTTTGTT  45 412
LOY33_RS13735 3051221 .. 3051254 - -20.3  -2.78706   AACCACAGCTGAAAC     CGCC-CGCCCTCCCGG GTG CCGGGAGGGCGCGGTG     CAGCCTACTGCGAGA 100 30
LOY33_RS13725 NONE
LOY33_RS13720 3048322 .. 3048345 -  -9.6  -3.09933   GGGCAACGCAGCGAA          CAGTTGAACC GGCT GGTGCAACTG           GATACCGAGTGCGAT  59 221
LOY33_RS13710 NONE
LOY33_RS13705 NONE
LOY33_RS13700 3043456 .. 3043470 -  -3.5  -3.83561   GCCGGCCAAAAAAAG               GACAC GCATT GTGCC               TTCACTGCACGGGAA  55 144
        nspC NONE
LOY33_RS13690 3041016 .. 3041040 - -17.1   -5.5208   GCACAACACAAAAAA          GGGGGACGCCA TCA CGGCGCCCCCC          TTTTTTTGTCAGCCT 100 48
LOY33_RS13680 NONE
LOY33_RS13675 NONE
        dsdC 3035277 .. 3035302 -  -6.2  -4.52589   GTTCTCCACAGAAAA         GCGAC-AGACC TCTGC AGTCTAGTCGC         CCGCAGCGCAACCCT  74 18
LOY33_RS13665 NONE
LOY33_RS13660 NONE
LOY33_RS13655 3033524 .. 3033534 -  -6.8   -3.3771   CCGTAAACGACAATA                 CAGC GCC GCTG                 CCGAACATATGTGCA  58 75
LOY33_RS13650 NONE
LOY33_RS13645 3031057 .. 3031089 - -10.6  -3.53012   TCGGCGCCGCCGAAA     GCATCCCGCAGCTGC AGGC GCAACTGCAGG-CGC      CGCTGGGGGTGAGCA  70 454
LOY33_RS13635 NONE
LOY33_RS13630 NONE
LOY33_RS13625 3027070 .. 3027080 -  -2.4  -2.52834   TATCGGAGCATTAAC                 CCAG GAT CAGG                 TAGGTCTTGCGTACC  38 10
LOY33_RS13620 3026047 .. 3026057 -  -8.2  -2.70932   CTTGCCGGCGAACGA                 GCGC AAC GCGC                 TCGCCTCCCTAGAGA  54 34
LOY33_RS13605 3023495 .. 3023517 -  -5.5  -3.14344   GAGGCGGCCTACGAA          CTGTTCGCGC ACCA GCGCG-ACGG           CGTGATGAAAGTCGC  49 63
LOY33_RS13595 NONE
LOY33_RS13590 3020033 .. 3020062 -  -7.7  -2.57881   GAAGCGTTGCAGAAT       GCCAATCCGCTGG GAAT CCAGCGGCTGGTC        GATGGCGTCATGAGC  50 129
LOY33_RS13565 3013038 .. 3013058 -  -9.7  -2.71731   GCCAGGCTTCAACGA            TCACCGGGA GAA CCCCGATGA            TCCGGTTGATGTGCA  55 452
LOY33_RS13535 3006723 .. 3006743 -  -6.1   -2.9175   GATACGCGAAGTATA            GGACAGG TACACGC CCTGCCC            TTGCCCCCTCACACG  51 34
LOY33_RS13530 3006152 .. 3006168 -  -2.2  -3.61398   GGCGTTCTTCAACAA              CCCG CAGAGTGAT CGGG              CCAAGGGCTTCCTGG  48 157
LOY33_RS13495 2999755 .. 2999776 -  -7.1  -4.07687   ATCCGCCGGCGAAAA           GGCCGCGGG TCAC CCCTTGGCC            AACACCTGCAACTGC  68 13
LOY33_RS13490 2998248 .. 2998258 -  -2.4  -3.35597   GGGAGTGGCCAAACA                 GACG CAT CGGC                 GCACCCCAGCTGTAA  46 191
LOY33_RS13485 2996880 .. 2996911 - -16.6  -3.85698   GTTTTTGTGGACAAA      GAGCGAGCAAGGGT GTGC ACCCCTGCCCGCCC       CCGGCCTCAGCCGAC 100 32
         tpx 2996131 .. 2996153 - -14.8   -5.4182   AACTATAAATAAAAA           CGGCCTGGGC TAA GGCCAGGCCG           TTACAACTTTTTTCA 100 137
LOY33_RS13475 NONE
LOY33_RS13470 NONE
LOY33_RS13465 NONE
LOY33_RS13460 2986873 .. 2986891 -  -4.4  -3.65827   CAACCTTTAGCGAAA             CGCACGGA GTT TCCGAGGG             ATGGCGGGATGTTTT  56 158
LOY33_RS13455 2984289 .. 2984299 -  -3.2  -4.86133   CACACATAGCAAAAA                 GCCA TTG TGAC                 GCAGGTCAAACATCC  73 442
LOY33_RS13440 2982724 .. 2982766 - -17.1  -3.03771   GCAGACCGGCCAACA CGCTGCCAGGCCATTGCGGG GCTC CCCG-AATGGCCTGGCACAG GGCTCAATGGCCCTT  89 29
LOY33_RS13435 2982020 .. 2982036 - -10.8  -5.04601   GTCAGAAAGGAAAAA              CCCGCC TCCAG GGCGGG              TTAGGTGCAAGGTGC 100 150
        ilvA 2980368 .. 2980384 -  -2.1  -2.70932   TCTCTGCCTCAAGGA              TCCGCCC GTG GGCCGCA              GGGCATGTTGATCCA  39 49
        yiaY 2979116 .. 2979163 -    -8  -3.54424   CGGCATCGCCGCAAA GCCAGC--CCACA-GGTTCTG GCTGTACCG CAGAACCCTGTGGAAGCTGGC TTGCCAGCGAAGATG  62 43
LOY33_RS13410 NONE
LOY33_RS13405 2974436 .. 2974459 - -10.2  -3.14051   GGATCTGCATGAACA          CCTGCAGCGA TCCA TCGCCGCCGG           TTGAGATGAGGCTCA  66 38
        cobW NONE
        cobN NONE
LOY33_RS13360 NONE
LOY33_RS13355 2960896 .. 2960914 - -14.6  -4.18018   CCCGTTCATGCAAAA             GTGCACCC ACC GGGTGCAC             TTTTTTTGTTTGTGA 100 96
LOY33_RS13345 2958890 .. 2958921 - -24.6  -3.14931   GCCATTCGCCAGCAA      GGCTGGCTCCTACC TTCG GGTAGGAGCCAGCC       TTGCTGGCGAATGGA 100 56
LOY33_RS13295 NONE
LOY33_RS13290 2949077 .. 2949099 -  -7.7  -3.09492   TGGGGAACTGGAAGA           GTTGCTGCG CCGCT CGCACCAAC           TGGTGGTGCGGCGAT  54 139
LOY33_RS13275 2947106 .. 2947134 - -20.4  -4.73388   AAGGTGCATGAAAAA        GCCGACTTGCGG GGTGA CCGCAAGTCGGC        TTTTCGACAGGGGCT 100 40
LOY33_RS13270 2945538 .. 2945553 -    -6  -3.58726   CTCTTCTATATAGAA              CGCGGC TGGA GCGGCG               CCGCCCTGTGCCTGA  56 456
LOY33_RS13245 2939986 .. 2940005 -  -5.1    -4.386   GAAGCGGGCACAAAA            TACTGTT TATTTG AACAGTA             CTATCTATGCACTTC  67 329
LOY33_RS13230 2939192 .. 2939247 -  -6.8  -3.08032   GCGCCCGGAAAACCA CCGGCTGACCATGCACATGGCCGGCA ACGCGG TGCCGCCGCTG-GC-TGGCCAGCGGG TAATTGAGGCACTGA  52 51
LOY33_RS13150 2928850 .. 2928865 - -11.8  -4.15577   CTAATAAGTAAACAA              GCCCGC CCCG GCGGGC               TTTTTTCTGCCTGTC  90 39
LOY33_RS13130 NONE
LOY33_RS13125 2926407 .. 2926424 -  -8.4  -3.62224   ATAGCTGTTGAAGAA             GCCGGT CTAGCC ACCGGC              TTTTTTGCGTCTGCG  66 299
LOY33_RS13120 NONE
LOY33_RS13115 NONE
LOY33_RS13110 NONE
LOY33_RS13105 NONE
LOY33_RS13100 2924051 .. 2924061 -  -5.4  -2.52516   CTGTGCATCACGAAG                 TCAG TCA CTGA                 ACACCTCAATACCCC  45 15
LOY33_RS13095 NONE
LOY33_RS13090 NONE
LOY33_RS13085 NONE
LOY33_RS13080 2921994 .. 2922013 - -10.7   -4.2679   CAAGCCGCACGAAAA            GCCCAGC ACGACG GCTGGGC             TTTGTTGGATCTTAA  85 115
LOY33_RS13075 2921012 .. 2921029 - -10.5   -5.4505   GGCTTCAATAAAAAA             CCCGGCC TTTC GACCGGG              TATCCCGAACCGCCT 100 169
LOY33_RS13070 NONE
LOY33_RS13065 NONE
LOY33_RS13060 2919617 .. 2919632 -  -4.6  -2.53903   CCTGTCAAAAATCAG              GCCGAC TTGA GTAGGC               AGGTTCCGCAGGCCC  43 6
LOY33_RS13055 NONE
LOY33_RS13050 2917812 .. 2917826 -    -7  -3.62275   AGGCATTACGCCAAA               CCTCCG ATG CGGCGG               GTGCCGGCGGACTGA  60 1
LOY33_RS13045 NONE
LOY33_RS13040 2915312 .. 2915346 -  -6.9  -2.89881   TACTGATGCGAGAGA     GGGCGGGGAGGACGC CTGTT GCTACATCCCTGCCC     GCTCAAACGCCAACG  53 12
LOY33_RS13030 NONE
LOY33_RS13025 NONE
LOY33_RS13020 NONE
LOY33_RS13015 NONE
LOY33_RS13010 NONE
LOY33_RS13005 NONE
LOY33_RS13000 2910789 .. 2910805 -  -4.4  -3.18264   GGGCGGACGGATGAA              CGAACA TCCAC CGTTCG              GCTGTACGGGCCTAG  49 83
LOY33_RS12995 2910194 .. 2910210 -    -5  -4.82901   TCTTGGGTAGAAAAA              GCCCGC ACGCG GCGGGT              TTCATGGGTGTATTT  76 45
LOY33_RS12990 NONE
LOY33_RS12985 NONE
LOY33_RS12980 NONE
LOY33_RS12975 NONE
LOY33_RS12970 NONE
LOY33_RS12965 NONE
LOY33_RS12960 2903484 .. 2903512 -  -8.2  -3.34856   ATAGTAGAAACCCAA       GCGAGGGTGCTGA ACCA TCAGCACTCTC-C        AATCGGAAGATGCCC  61 102
LOY33_RS12950 2902085 .. 2902109 -  -6.3  -3.35522   GAAGTGTTCCAAATA          GAGCCCAGGCA CCT TGCCTCAGCAC          ATGAAGCGACTTCTT  56 135
LOY33_RS12935 NONE
LOY33_RS12930 NONE
LOY33_RS12925 2898410 .. 2898425 - -11.8  -3.31269   TCGATAGCACAGTAA              CCCCGC ATGG GCGGGG               TTCGGCTTGATTGGC  75 44
LOY33_RS12920 2897467 .. 2897480 -  -9.5  -5.64873   CCGAACAATAAAAAA               CCGCC CGTA GGCGG                TTATGGTTAGCAACA 100 457
LOY33_RS12915 2896798 .. 2896811 -  -9.5  -5.42259   CCAGGCGTAAAAAAA               CCGCC AGGC GGCGG                TCGGTGTTCTGTGTA 100 45
LOY33_RS12910 2893322 .. 2893333 -  -5.8  -3.62054   ATCTCAAAGAACCAA                CTCG ATTC CGAG                 GACGCCGTTTGCGTG  55 2
LOY33_RS12905 NONE
LOY33_RS12900 2892105 .. 2892119 -  -8.5   -5.4833   CCAGGCAACAAAAAA               CCCGC TCAAG GCGGG               CTCTTGATGTTTGCA 100 43
LOY33_RS12895 2890989 .. 2891014 -  -8.2  -3.12668   GATGTCGACAGGGAA         GCGCGATTGC TCACTC GCATCCGCGC          CGTGCGGCAGCATGA  57 236
LOY33_RS12890 2890580 .. 2890594 -  -8.5   -5.4833   CCAGGCAATAAAAAA               CCCGC TCAAG GCGGG               TATTGGTGTTCGGCC 100 45
LOY33_RS12885 NONE
LOY33_RS12880 2889353 .. 2889365 -  -6.2  -3.91072   GCAAACGCGCACAAA                CGCG CAAGC CGCG                CTAAATGCCGCCGTT  64 227
LOY33_RS12875 2888125 .. 2888136 -  -7.2  -4.74103   GCGCCAACTGAAAAA                GGCC GGAA GGCC                 ATTGAAAAATTCGTG  84 501
LOY33_RS12860 2887416 .. 2887456 -  -6.8  -2.59742   TCTAAGCGGCAGAAG CTCGGCGATCTCGCTTGGC CGCT GCAAAGCGAG-CCGACGAT  TTACTCTGCTGCACC  50 103
LOY33_RS12845 2883616 .. 2883647 - -10.2  -4.57474   TCAACGCACACAAAA      GCGCTCGACCTCA TGATTGC CGAGG-CGAGCGC      TGTTGCGTCCTGAGT  90 73
LOY33_RS12835 NONE
LOY33_RS12830 2882248 .. 2882299 -    -2  -2.52516   CTGGCGACCAGCAAC GCCAACGCGGTCAGTTTCATGACG CTAA CCTCCAGGCACTGCCGGCATTGGC AACGCCGCTCAGTGG  38 34
LOY33_RS12825 2881800 .. 2881827 -    -7  -3.17392   CACCCCGCAACCCAA        CCGCGAACTGGAG ATG CTCCA-CTCGCGT        TTTCCGCCAGGCACC  52 292
LOY33_RS12810 2878134 .. 2878164 - -19.8  -2.92192   GCGTATTTAACCAGA       CTTTGAAGGGGCGC CGC GCGCCCCTTCACAG       CTGAGCCCGCTCCTG 100 71
LOY33_RS12805 2877830 .. 2877848 -   -16  -3.72893   CACCTCGCCAGCAAA             GGCCCGGA ACA TCCGGGCC             CTGTCAGTTGGAGGT 100 92
LOY33_RS12800 NONE
LOY33_RS12795 2877332 .. 2877352 - -16.1   -5.0538   GCTGATTGCAAAAAA            GGCCCGGCA TTG CGCCGGGCC            CTTGTTTGCGGCTAC 100 37
LOY33_RS12770 2874892 .. 2874906 -  -2.1  -3.53012   GCGCGCTTCTCGAAA              TCTGCC AGGA GGC-GA               CCATGCGCCAGAACA  47 353
LOY33_RS12760 2873669 .. 2873714 -  -6.7  -2.78384   CGGTGCTGCAGTACA CCGATCTGGACGGCCGCGCCCG TTC CGATCGCGGC-GTGAAGCTCGA TCTGGATGGGCATGC  48 492
LOY33_RS12705 2857961 .. 2857980 -  -9.2  -3.07816   CCCGCAGGTAGGCAA            CCGGCGCC AGGC AGCGCCGA             TTGCAGGGTCATATC  64 52
LOY33_RS12700 NONE
LOY33_RS12695 2855905 .. 2855915 -  -6.8  -4.25104   CGCTGCCCAGCAAAA                 CGCA CAA TGCG                 ATGCCACAAATCAGT  71 87
LOY33_RS12690 NONE
LOY33_RS12685 2853218 .. 2853228 -  -2.4  -2.57132   GCCCGCCCCGAGAAG                 GCAG TGC CAGC                 AGAGGGTTTCAGGTA  38 136
LOY33_RS12680 2851401 .. 2851415 -    -7  -3.29144   CCAGGGCCTGCACAA               GGCCGG CAT CCGCCC               ACGCCTGATGGTGGA  54 421
LOY33_RS12670 2848948 .. 2848961 -  -5.9  -5.08824   TCCGCACGCAAAAAA               GCACC GGCC GGCGC                AACCAGAGCGAGCAT  86 272
LOY33_RS12655 2847052 .. 2847066 -  -4.2  -3.89881   AGCAACCTGGAGAAA               GCCG ACCTGCG CGGC               ACTCGCCAGCACTAC  59 118
        pedF NONE
LOY33_RS12635 NONE
LOY33_RS12630 2841954 .. 2841966 - -10.5  -2.64616   CGTGGAGCGATACTA                CCGCG ATG CGCGG                ATCACGCAGATCTAT  57 171
LOY33_RS12615 2838238 .. 2838251 -  -2.3  -3.65522   CACTGACGTGAAGAA               CAGTG GCAT CGCTG                TGGGCGCCGGCTTGC  51 61
LOY33_RS12610 NONE
LOY33_RS12605 2834094 .. 2834128 -   -10   -2.5294   CATCGCGCAGAAGAT     CCACGCCTATACCC AGGCCAA GGGCGTAGGCATGG     TCGAGTTCGCCATTG  56 224
LOY33_RS12590 2830612 .. 2830635 -    -3  -3.31144   TGTTCAGTTGGACAA          TGCACCGACC AAGC GGCCCGCACA           GGCAATCAACTGTGC  45 31
LOY33_RS12585 2829292 .. 2829347 - -33.6    -3.524   GATCTATGTATATAA CCGGCAAGGCCGGCGCCTACAG GTTGGCCGCTGT CTGTAGGCGCCGGCCTTGCCGG CGAAGCAGTAGTGGG 100 45
LOY33_RS12580 NONE
LOY33_RS12575 NONE
LOY33_RS12570 NONE
LOY33_RS12565 2822975 .. 2822987 -  -9.1  -2.60075   TGCTCCTGAATGAAG                GCGGT TAC ACCGC                GCTGGCTTCGTCGCG  57 17
LOY33_RS12560 NONE
LOY33_RS12555 NONE
LOY33_RS12550 NONE
LOY33_RS12545 NONE
LOY33_RS12540 2816092 .. 2816104 -  -4.7  -2.91924   GGACTTCGGACAAAT                GCGGC ATG GGCGC                CTCCTTGGGCGTTTG  46 48
LOY33_RS12535 NONE
LOY33_RS12530 2813237 .. 2813251 -  -2.8  -3.85698   CGGGCCTTCCAGAAA               CTCTTC GAG GAACAG               GCCGGCGCGTTGCAC  56 236
LOY33_RS12515 2810262 .. 2810279 -  -2.5  -4.05788   CTGGCGCAAAGCAAA             GGGGACC GGCA GGGCCGC              GGGGTCAGTCATCGC  58 464
LOY33_RS12505 2808478 .. 2808494 -  -9.3  -3.01791   ACTGGCGCCCCAAGA              CGCCGGC AAG GCCGGCT              CCTAGATTCGCTGCA  62 56
LOY33_RS12495 2806458 .. 2806474 -  -4.3  -2.57244   GTAGGCATCAACGTA              CTCCCAG TTT CTGGACG              TTGGAATCACAGTGG  42 1
LOY33_RS12490 NONE
LOY33_RS12485 NONE
        argE NONE
LOY33_RS12475 2802966 .. 2802997 - -13.8  -2.77523   CGGTGAGCAACACCA      GCCCGCTACTGACA GAAG TATCAGTAGCGGGG       GCTAAGGCCTGGGTG  76 56
LOY33_RS12470 NONE
LOY33_RS12465 2800889 .. 2800900 -  -2.2    -4.258   GCAGGTATCAATAAA                GCGA CAAC TCAC                 GACCTGTGCTCGGCC  62 67
LOY33_RS12455 NONE
LOY33_RS12450 2799109 .. 2799153 -  -3.1  -5.58179   CACCACAAGAAAAAA CGAACCG-AGAAAATATCAAC ATAAA GTTTA-ATTTTCAACGGTTCG TTAAAATCATCGCAG  86 55
LOY33_RS12445 NONE
LOY33_RS12440 2797274 .. 2797292 -    -3  -3.12505   ACTGCACAGTGAAGA             CCTGCCCA ACC CGGCCAAG             CTGGAGGTGCGGGCC  44 164
LOY33_RS12430 NONE
LOY33_RS12425 NONE
LOY33_RS12420 2788382 .. 2788417 -    -9  -2.80816   GGGTGATCGAGTACA    GCCGCGGGCACATCAAG GTG CTCGAT-CGGCCGCAGC    TGGAACGACTGAGTT  56 127
LOY33_RS12400 NONE
LOY33_RS12395 2774055 .. 2774089 - -13.6  -2.72558   AGAAGGCGCGAATGA     TGCCTAGCCTTGCG TAGTGCT CGCAAGGCCCGGCA     CTCACATAAGTTTGC  76 27
LOY33_RS12390 2773508 .. 2773533 -  -9.2  -3.28791   AGCCTTTTCTTATAA         CTCAACTAAA GGACTA TTTAGTTGAG          TTATATTGAAATGTG  66 100
LOY33_RS12375 2769100 .. 2769118 -  -5.2  -3.11272   TACGAGTAGCGAAGA             CCGTACAC TGC ATGAACGG             ATGCTGGCCCAGCGT  49 193
LOY33_RS12365 2767841 .. 2767854 -  -4.5  -4.11216   TCCCCACGCGGAAAA               CCCAA TGCC CTGGG                ATATTTACCAAGCGG  64 94
LOY33_RS12285 NONE
LOY33_RS12280 NONE
LOY33_RS12275 2746594 .. 2746604 -  -2.4  -2.56124   CTCATTCAAATATAC                 CCTC GGC GTGG                 CGGCAGTTTGTCGTT  38 5
LOY33_RS12270 NONE
LOY33_RS12265 2743968 .. 2743992 -  -8.5  -3.00525   TGGTCGCAAAGCAGA          GGGGTCATCTT GAA ATGATGGCCCC          TATTTTTTTGGATGA  59 323
LOY33_RS12230 2736635 .. 2736652 -  -4.8  -2.78715   AAGTGTTCCAGGAGA             TGGGCC TTTAAT AGCCCA              GTACCCTCGTTCTGC  44 103
        rdgC 2731246 .. 2731264 - -14.6  -3.34398   GCGGCCGCTGAAAGA             GGGCCAGA ACG TCTGGCCC             TGTCATGTCTCAAGC  87 72
LOY33_RS12185 2727520 .. 2727561 - -13.2  -3.14132   CGTGCGGGGCAGCAA TCGG-CCAGAAGCAGCC-AC TCAA GTCGGCCGCTTCTGGTCCAA ATTTGCTTATCGCTG  76 87
LOY33_RS12160 2723036 .. 2723047 -  -4.4  -2.62396   GATTCGCCGAGAGCA                TCGT CGGA ACGA                 CCATCACTGATCGCT  43 70
LOY33_RS12140 2719494 .. 2719505 -  -3.6  -2.60032   CTTGCGCCAAAAATC                GGCC TGTC AGCC                 CTGCTGGGCCTCGCT  40 418
LOY33_RS12125 2716566 .. 2716584 -  -4.4  -5.24129   CTTGCGCACAAAAAA             TGCCGGTG ACA CGGCGGCA             CTTTCAGGAATGGCG  86 190
LOY33_RS12115 2714444 .. 2714469 -    -9  -3.31144   GGCCCATGCGCAGAA         CTGGTAGCCA TTACGG TGGCTGCCAG          TTTCAACGGAACGGG  63 262
LOY33_RS12100 2711594 .. 2711606 -  -3.4  -3.04322   CTCAACGCTGCAATA                GGTT CGGAC AACC                TGTGGCTTATCAGAC  43 172
LOY33_RS12095 NONE
LOY33_RS12090 2709226 .. 2709244 -  -8.8   -4.8048   GGCGGATACGAAAAA             GCCCGC TTTTAGG GCGGGC             TTTCAGGCGTCTCCA  93 144
LOY33_RS12085 2707824 .. 2707835 -  -4.4   -3.9279   AGTCAATGCTAGAAA                GCTT AATA AAGC                 TTCGTCACGTTATGG  59 313
LOY33_RS12080 2707311 .. 2707335 -  -5.6  -4.17698   ACGTATACAGAGAAA          GGTGTACAGG TGTTG CCCGCGCACC          ATTACAGTTTAATGG  66 27
LOY33_RS12070 2704396 .. 2704407 -    -3  -4.02532   TAACAACAAAGACAA                TCTA AAGT TAGA                 AGCCACACTTGTATT  58 59
LOY33_RS12065 NONE
LOY33_RS12060 NONE
LOY33_RS12055 2701263 .. 2701279 -  -2.2  -4.20025   AATGCTTAATACAAA              CCTTTC TAAAT GAATGG              GTTTTAAGTTGCGGT  59 418
LOY33_RS12050 2699941 .. 2699960 -  -3.6   -4.0371   TAGCGTGGATACAAA            CCAATTTT GGGG AAAGTTGG             AATCGATGGGAGAGG  60 270
LOY33_RS12035 2694789 .. 2694818 - -14.3   -2.5655   GGCAGGTACATCAAT       GCGGTGGGGCATA GTGA CATGCCCCACCGT        GGAGGAGTCAGGCCT  78 33
LOY33_RS12030 NONE
LOY33_RS12025 2690374 .. 2690412 - -22.5  -2.70932   GCGCCGGGGCAATGA   GGCTGCCAGCCCGGTGA GGTCG CCACCGGGCTGGCAGCA   TCGGCTATTCGCCTT 100 30
LOY33_RS12005 NONE
LOY33_RS12000 2685250 .. 2685268 -  -8.1  -3.86897   CGCACTGGTCAGAAA             CCCCAGC CGGTC GCTGGAG             TGGGCGGTTTGCGAA  66 486
LOY33_RS11990 NONE
LOY33_RS11985 2683480 .. 2683497 -  -3.3  -2.70932   GCTTTGGCCGAATTA             CCACCTG CGCC CAGGCCG              GCCGAGGGCTACTTC  41 34
LOY33_RS11980 2683042 .. 2683065 - -10.2  -4.18802   AGATAGACGCCAAAA          GCGCGGCGTT GACC ATCACCGCGC           TGATCGACGGCTTCT  85 155
LOY33_RS11935 2671277 .. 2671300 -  -4.4  -3.30124   GTCCACCGGGCAGAA          GCGC-CGCCTG CTG CTGGCCCGCGC          GCTGGTTCACCGGCC  49 363
LOY33_RS11925 NONE
LOY33_RS11920 NONE
LOY33_RS11915 NONE
LOY33_RS11910 2668086 .. 2668112 -  -4.4  -3.65522   GAGTCATCGGAACAA        CCCGTA-TGCC GTGACT GGCAGTGCGGG         TTTTGCAGCGTTGAG  56 59
LOY33_RS11905 2662750 .. 2662764 -  -2.7  -2.57931   GGCAGGGGTCAGAAG               CGCCC GTCCA GGCCG               ATGCGGAACATCTCG  38 4
LOY33_RS11900 2660096 .. 2660130 -  -2.6  -4.11216   CGGCTACTGGGAAAA     CCCCGAGGCCACCACC GCG AGCATCGACCACGAGG     GCTGGATGCACACCG  58 501
LOY33_RS11855 2648380 .. 2648395 -  -7.5  -3.14051   GCAGGCCGACGAACA              GGCCG TGACCG CGGCC               ATGCAGGCGGCGCAG  54 446
LOY33_RS11820 2641207 .. 2641236 -    -8  -3.76224   TGGGTATCTATTAAA       CGCAGGATAA GCCTATTTTT TTATCCTGCG        CTTTATAGGAAGGTG  66 50
LOY33_RS11815 2639961 .. 2639992 -  -8.1  -3.78879   GACAGGAGAATAGAA      CCTGTGCGC-TGAT CATCC ATGAGGCGCACAGG      GAGGGGAAATCAGGA  66 35
LOY33_RS11810 2638121 .. 2638137 -  -4.3  -3.66018   GCACGATTGTAAGAA              CAGGCAC GCA GTGACCG              ATGCCGAGATGACCG  54 207
LOY33_RS11805 2636556 .. 2636576 -  -2.5  -3.33492   TCAGTCAGTGCAGAA            TTCATGGTG CAG CTCCATTAA            CTAACGATGGTGTCA  46 62
        gabT NONE
LOY33_RS11795 2634579 .. 2634611 -  -6.3  -3.14132   CGGGGTGCTGAGCAA     GCC-GGGCCACGAAC TGTCG GCT-GCGGCCCAGGC     GTTGTTCGACAGCCT  51 68
LOY33_RS11785 2631949 .. 2631965 -  -4.4  -3.16881   GATCGAGCTGATGAA              TGCGCT GGCCG AGCACA              TGCCCTACAGCCCCG  47 520
LOY33_RS11765 2627727 .. 2627752 -  -4.7  -2.86271   GGCCGAGCAGAAGTA         CCGCGCCAA-GA ACT TCATCGACACGG         TGGTCTATCGCGGTG  44 286
LOY33_RS11750 NONE
LOY33_RS11745 NONE
LOY33_RS11740 NONE
LOY33_RS11735 2622134 .. 2622174 -  -4.6  -3.14132   GGCTCGGCCCAGTAA GCTGACCGGCC-C-GATGCC TCA GGAACCGGAGGCCGGGCACC CGGCCCGGGTGTCAT  47 3
LOY33_RS11725 NONE
LOY33_RS11720 NONE
LOY33_RS11715 NONE
LOY33_RS11710 NONE
LOY33_RS11705 NONE
LOY33_RS11700 NONE
LOY33_RS11695 NONE
LOY33_RS11690 NONE
LOY33_RS11685 NONE
LOY33_RS11680 NONE
LOY33_RS11675 NONE
LOY33_RS11670 NONE
LOY33_RS11665 NONE
LOY33_RS11660 NONE
LOY33_RS11655 NONE
LOY33_RS11650 2602035 .. 2602046 -  -3.6  -3.47573   GGACCGACAGCACAA                CCGA TCAG CCGG                 GCGAAGCGGTGGTAG  49 41
LOY33_RS11645 2597560 .. 2597591 -  -9.2  -4.36914   GGCCCCGGCACAAAA      GCCAGCCTGGCCCG GGTG CGCTCCGGGCCGGC       GCCCGCCTGTCAGTC  83 35
LOY33_RS11640 2595737 .. 2595749 -  -3.4  -2.63208   TGGTACGCAAAAAGT                GTGT TGCCT ACAC                GGGCCCTATCGCGGG  40 150
LOY33_RS11635 2595207 .. 2595236 - -15.7  -2.85354   CACCTTAATTCAAAG       CCCTGCACGCGAC CATC GCCGCGTGCAGGT        GGCGTTCATTGCGGG  86 31
LOY33_RS11630 NONE
LOY33_RS11625 2593395 .. 2593407 -  -4.7  -2.88544   GGCGAGGGTCAGACA                CGGGG AGC CCCAG                GTGGAAGAGGCTGGG  46 158
LOY33_RS11620 2592850 .. 2592865 -    -6   -3.4072   CATGCGCGACGACAA              CGAGCG GCGC CGCGCG               GTGGACCGCTTCGAC  56 43
LOY33_RS11605 2590349 .. 2590366 -  -5.6  -4.19238   GGCGCAAGGGTAAAA             CCTCAA GTTAGG TTGAGG              TCAAGCACCTGTTTT  66 60
LOY33_RS11600 2589625 .. 2589660 -  -3.8   -4.3534   GGCCAACTATGAAAA    GGCAGTGCAGGCCAACT TCG AGCAGGCCCGC-CAGCA    ACGCTATGCCTACCG  68 249
        alkB NONE
        ligD NONE
LOY33_RS11520 NONE
LOY33_RS11515 NONE
LOY33_RS11510 NONE
LOY33_RS11505 NONE
LOY33_RS11500 2572342 .. 2572400 -  -5.1  -2.89564   CCGCCACGGCACATA GC-GCCAGCCCGAGATGCCGATATGCACC TGC GCCGCACCACGGC-TCACGGGGTAGCCGC CAGGGTGGTGAGGAA  46 11
LOY33_RS11495 NONE
LOY33_RS11485 NONE
LOY33_RS11480 2568706 .. 2568744 - -10.8  -3.61398   GGGTGGGGGCAAGAA   GGCGCCGGCCAAGAAGGC AGC GCCTTCGCGGTAGGAGCC   GGCGTTGCCGGCGAA  71 99
LOY33_RS11460 2565506 .. 2565529 -  -8.2  -3.14132   GTGTTTGGCGAGCAA          CTGCTCG-AAC CTG GCTACGAGCAG          GTCGAGCGCATTGCA  56 480
LOY33_RS11440 2562850 .. 2562872 -   -17  -3.04248   CAAGAGTCCTCAAGA           CCGACGCACC CTC GGTGCGCCGG           TCGCTCGAGCGTCAG  89 37
LOY33_RS11435 NONE
LOY33_RS11430 2561632 .. 2561647 -  -3.2  -3.71284   GGCCTATGAAGACAA              GCGTCCG CTG CAG-CGC              TACGTGGACGAGGCG  53 320
LOY33_RS11400 NONE
LOY33_RS11395 NONE
LOY33_RS11390 NONE
LOY33_RS11380 NONE
LOY33_RS11375 NONE
        hpaE NONE
        hpaD NONE
LOY33_RS11360 NONE
LOY33_RS11355 NONE
        hpaH NONE
        hpaI 2544294 .. 2544313 -  -3.5  -2.85784   GAACTGAAGCAAGTA            CGGCG CTAACTCATT CGCCG             GCAAGGCCGGCTCCT  41 96
LOY33_RS11335 NONE
LOY33_RS11330 2541994 .. 2542006 -  -6.9  -3.03124   CTTGACCCGCGAAGA                GGCCC GTC AGGCC                ACCGCCAGGTAATGC  54 19
LOY33_RS11300 2534859 .. 2534869 -  -4.6   -3.4285   CCAGCCAACTCAGAA                 CGGC ATC GCCA                 GCGTCACCTGGCTGT  51 9
LOY33_RS11285 2532476 .. 2532495 -  -2.8  -3.65046   GCTGGAGCTGAACAA            TG-GCGAGC ACC GCTTGCTCA            AGGGCCTGGTGCTGA  53 510
LOY33_RS11275 2531460 .. 2531477 -  -8.3  -3.56092   CCACCAGCTTCGAAA             GCGGCCC CAAC GGCCCGC              TGGTGCCCGAGCTCA  62 460
LOY33_RS11260 2529312 .. 2529324 -  -3.3  -2.58714   TGGCACATCAATCGA                TCCCA CTC TGGGC                AAACTCCTGGGCCAG  40 5
LOY33_RS11255 2527992 .. 2528012 -  -8.9  -3.53012   GTGCTGGCGGTGAAA            GGGCTGGAC AAG GCCCAGGCC            GGCTCCGCCTCGGCG  62 359
LOY33_RS11230 NONE
LOY33_RS11225 2522802 .. 2522831 -  -5.5  -4.63218   CCGGCTCCAAGAAAA       GCATGGCCACCGG TGTG CCGATGGCCCAGG        TGCTGTTTGCCGGGG  77 231
LOY33_RS11215 NONE
LOY33_RS11210 NONE
LOY33_RS11205 2519191 .. 2519214 -  -4.4   -3.1319   GTAAAACTCATCGAA          GGCACCGTCGC ATG GGGTCGG-GCC          AACGCTGGCCCCTGA  47 85
LOY33_RS11200 NONE
LOY33_RS11195 2516556 .. 2516584 - -18.9  -4.56597   GGGTGGTTTTAAAAA        TGCAGGAGCCGGC CTT GCCGGCTCCCACA        TTGGTTGCAACGCAC 100 103
LOY33_RS11190 NONE
LOY33_RS11185 NONE
LOY33_RS11180 2512275 .. 2512291 -  -3.5  -3.41988   GTTCAGGCAAGAATA              GCCGCTG CGT CGGTGGC              GCTCAGCGCGAGTAG  47 28
LOY33_RS11175 2510655 .. 2510700 -    -6  -4.57569   GGACCTGCTGAAAAA GCGCAACGCCGGCATCGAGCA GTTCG TGCTCGAGGACGAGGG-GCGC ATGATCGGCAGCCGC  78 509
LOY33_RS11140 NONE
        lpxO NONE
LOY33_RS11130 2500542 .. 2500571 -  -4.7  -3.14132   GCGGCCGGCCAGCAA       CTGGGCAGCCGCC TGCT GGAGGCGGGCCTG        GCCAAGGCCCGGGCG  47 216
LOY33_RS11115 2498508 .. 2498531 -  -5.9  -3.37879   ACCAAGCTCAAGGAA          GGCCAGGCC GACGTG GACCTGGGC           TGGCGCGCCGCGATC  55 467
LOY33_RS11105 2497245 .. 2497270 - -10.4  -3.28712   GCCGCTGGCCCACAA         CCGGCGCGTGC TGTGC GC-CGCACCGG         GCTACCTGCAACGGC  63 423
LOY33_RS11095 2495484 .. 2495499 -  -6.2  -3.01791   ATCTTTTGGTTAACA              GATTCT GCCT AGAATC               TTGTGGGCTCGCAAG  51 89
LOY33_RS11090 2493701 .. 2493712 -  -3.6  -4.08666   ACAGGCAAAAAAAAG                GACC GTCA GGCC                 TGCATCCGTGCAGGT  60 58
LOY33_RS11085 2492433 .. 2492469 -  -7.8  -2.54896   GTTTCACGCAAGGCA   CTCCATGCCGCCCCCGG CGTA CCGGGGGCGGG-CGTTG    TCAGTCGTTGAGGTG  53 26
LOY33_RS11080 NONE
LOY33_RS11075 2489986 .. 2490005 -    -7  -3.68619   GCGAATCGATTCAAA            GGTCCAGC ACCA GCCGGGCC             GTGCGCGCCCGCGAC  63 1
LOY33_RS11055 2481775 .. 2481793 -  -8.8  -3.14132   CGTGGCGTGGATCAA             GCTGCACC CTG GGCACAGC             GCCACCGATGGGGAG  56 283
LOY33_RS11045 NONE
LOY33_RS11040 2477241 .. 2477251 -  -8.2  -3.07487   TCACATCCGGAAAAT                 GCCG AAA CGGC                 TCGGTTCGATCGGGG  57 0
LOY33_RS11035 NONE
LOY33_RS11030 2474406 .. 2474430 - -11.5  -2.87463   AAGCCGGCCCACACA          GGGTTTCATGG CGC CCACAAAACCC          TGTGCAAGTGCAGTG  68 44
LOY33_RS11020 2473064 .. 2473084 -   -14  -5.85178   AAGAGCCAAAAAAAA            GACCCGGC AAAAA GCCGGGTC            AAAAACCGTGATTAG 100 235
LOY33_RS11015 NONE
LOY33_RS11010 NONE
LOY33_RS11000 2468920 .. 2468945 -  -6.9  -2.63102   ACGACTGCCAGATCA         GCTCGCCCAACA TCG TGTTCGGC-AGC         GCGCCGGTGGTCAGC  47 358
        zapE 2461256 .. 2461275 -  -9.2  -3.12327   CGGCGAGATGGAAGA            CCTGGTGG CGCG CCACCCGG             CGATTGCCGAGTGCG  59 364
LOY33_RS10950 2458147 .. 2458159 -  -6.2  -3.64487   CTACACCCCCAAGAA                CCCG GTCAG CGGG                CTCAGCGACGAGCAC  59 150
        hydA 2452685 .. 2452710 -  -9.6  -3.55444   CCGCGATGCTTTAAA         GGCTCAGCGC TTGACC GCGCCGGGCC          TGCACTGCTGCGCAC  69 3
LOY33_RS10925 NONE
        preA 2449691 .. 2449707 -  -3.5  -3.78934   CTCGCCGTACAAGAA              CCAGGTG TAC CGCCAGG              CCGGGCTGGGCCGCG  57 237
LOY33_RS10910 2446071 .. 2446087 -  -9.3  -2.69151   TGGCGGCAGAGATGA              CCGCCCG TAC CGGGCGC              GACCCAAGCCAGGCA  55 465
LOY33_RS10880 2436342 .. 2436352 -  -6.8  -3.08679   TTTGCCGATTGAAGA                 GGCA TTA TGCC                 ATCATAATTTTTTAC  54 304
        hxsD NONE
        hxsB NONE
        hxsC NONE
        hxsA NONE
LOY33_RS10855 NONE
LOY33_RS10850 2431823 .. 2431853 -  -7.4  -2.64735   AGCTCAGGCAGATGA       CCCCGTGGCGGCCC TTC AAGCCACCACGCGT       TCAGCTTATTTAGTT  50 31
LOY33_RS10795 2418268 .. 2418281 -  -3.7  -3.29471   GCTCGAGTACATGAA               CAGCC TGCA GGCGG                CACTGGCGACGTGCG  47 151
LOY33_RS10755 2410062 .. 2410072 -  -8.2  -2.74322   GGGAAGGGCTGAAAG                 CGGC CCT GCCG                 GGTCCTGCGTGCCTT  54 57
LOY33_RS10740 2406835 .. 2406846 -  -7.2   -3.1739   AGATCAGCGGATGAA                CGGC CTGC GCCG                 ACGCTGCGATAGCCG  56 72
LOY33_RS10735 2405845 .. 2405874 - -12.8  -3.14211   ACCCTCGGCGATGAA       GCCGGGGCGGCA TCGGGT TGCCAGCCCGGC        GTGGTGAGAGGGAGG  76 67
LOY33_RS10730 2405211 .. 2405229 -  -3.8  -4.23723   TAATATCATTTAAAA             CAACGC GGCCGAG GCGCTG             GGGTAGCGTCTCTAG  62 90
LOY33_RS10725 NONE
LOY33_RS10720 NONE
LOY33_RS10715 2400779 .. 2400791 -  -9.1  -3.53012   CGGGTGCGGTGGAAA                CCGAG CTG CTCGG                CCACACCACCGATGA  64 216
LOY33_RS10705 2399276 .. 2399300 -   -10  -3.66658   AAGATCGCGAAAACA         GCCAGCGGTCC GTTC AGACCGC-GGC          TTTCGATGCCTGTCG  75 43
LOY33_RS10700 2398534 .. 2398545 -  -3.6  -2.63596   GTTCAGGCGACATGA                CAGG CCTC CCCG                 GCGGCGGTAGGCAGG  42 1
LOY33_RS10695 NONE
LOY33_RS10690 2396389 .. 2396405 -  -3.6  -2.87132   CGCGGGCGTTAGACA              GGCGCA TGCTG TGCTCC              ATCGTGCGGCAGGCC  44 2
LOY33_RS10685 NONE
LOY33_RS10680 NONE
LOY33_RS10675 NONE
LOY33_RS10670 2392716 .. 2392731 -  -5.4  -2.73681   CACCCACCTGAACGA              CGACCCG GCC CGGGT-G              CAGCAGGAGTGGGCC  45 201
LOY33_RS10660 NONE
LOY33_RS10655 NONE
LOY33_RS10650 NONE
LOY33_RS10645 2384681 .. 2384691 -  -8.2  -2.66316   GCGTCGAGCACAGTA                 CCCC GGC GGGG                 TTTGCCAAGCTGATT  52 140
LOY33_RS10620 NONE
LOY33_RS10615 2378056 .. 2378082 - -19.4  -3.33696   TTGTGCCCGAAGCAA         GCAGGAGCGGGC CTT GCCCGCACCTGC         GTATGCGGCCTGTCG 100 77
LOY33_RS10600 NONE
LOY33_RS10595 2373668 .. 2373694 -    -5  -3.40403   GCTGGTGGAGCAGAA         CGCCAGGCTTGC CTT GCAGACCTGCCA         GCGCGCCTATGTGAT  51 133
LOY33_RS10565 2367456 .. 2367506 -    -3  -3.70773   TTTCACAGCGAAGAA CAGGTCATCGCCCAGGCCAATGCC ACC GAGTTCGGCCTGGCCTGCTACCTG TATGCACGGGATGTG  53 251
LOY33_RS10515 NONE
LOY33_RS10510 2353815 .. 2353828 -  -2.3  -3.58269   CAACGCAGGTTCAAA               CGCTG GTCG CAGGG                CTAGTGATCGTTGTG  47 26
LOY33_RS10495 2350426 .. 2350463 - -11.3  -2.56596   GTTTGGATGAAGGCA   CACTGCCCACGCTGCCTC AGC GAAGTGGCGTGGGCA-TG   CAATCAGCGCTTGCG  66 29
LOY33_RS10490 2349734 .. 2349750 -    -5  -3.79519   AAGGGCACGACCAAA              GGTGGG GCGGG CCCGCC              CGGCGGCGGGCCTGG  59 49
LOY33_RS10485 2349014 .. 2349025 -  -2.2  -2.94099   GCGTTCCATCACACA                CCTC CCTT GAAG                 CTGTCCAGGGTGTTG  40 7
LOY33_RS10480 NONE
LOY33_RS10475 2347751 .. 2347790 - -14.9  -3.09749   TAGGTGCAACACAGA  GGGGCG-CGCCCCGGCGC ACAGG GCGCCGGGGCGACACTCA  GGGCCTGAAGCCCAG  85 23
LOY33_RS10470 2346448 .. 2346491 - -15.4  -3.09635   ACGCCCACCACTGAA CCCGCCCGACGCTGACCGGC GAGGCT GCCGGCCAGCGTCA--CGGG CTCAGGCCACCACGC  85 27
LOY33_RS10425 NONE
LOY33_RS10420 2334000 .. 2334012 -  -4.9  -2.78712   GGGCGAAGGTAACTA                TCATT CGG AATGA                TATGAACACCATCGC  44 126
LOY33_RS10415 NONE
LOY33_RS10410 NONE
LOY33_RS10405 2328013 .. 2328031 - -17.4  -5.75945   AGGCCTCAAAAAAAA             GCCCCGCC AAT GGCGGGGC             AAAGTGGTCGGTGCT 100 63
        metH NONE
LOY33_RS10380 2319194 .. 2319230 -  -3.6  -3.36273   CCGCGCCAAGATGAA   CCATTCC-TGGACCCGC CCGC ACGGCTCCAAGGTGTGG    GCGAACGAGATCATC  49 421
        dkgB 2317651 .. 2317685 -  -3.3    -3.727   GGCACCACACTGAAA    GGGTCGGCGCGCGCCG GTGC CGG-GCGTGCCTTCCA     TTTCACGGGAGAACT  52 284
LOY33_RS10345 2314287 .. 2314300 -  -5.2  -2.75825   CGTTCAAGAAATGGA               CGGG GGAGAG CCCG                GGGAGCTATCGGGCG  47 0
LOY33_RS10335 2311965 .. 2311979 -  -2.1  -3.40775   ACTCCGACTCAAACA              CGTTCG AACA CGA-CG               GCGATACCCTGACCG  46 4
LOY33_RS10330 NONE
LOY33_RS10325 2310442 .. 2310457 -  -7.6  -2.78384   GCCTGCGCGACCAGA              TTCAGG AACT CCTGAA               ATAGGCCTGACGTTG  54 49
LOY33_RS10295 2303228 .. 2303244 -  -2.9  -2.64805   TTAAACCAGAATCCA              GGCCA CCCGTTT CGGCC              TCTTCGGCGGCAGGC  40 79
LOY33_RS10290 2301387 .. 2301416 -  -6.4  -2.62184   GGCGGCTGCAGACTA       CGTCGGTGCC-GT GGAGG ACTGGCACCGCCA       GCGCGCTGCGCTGTA  46 475
LOY33_RS10275 2299000 .. 2299015 - -11.8  -3.61089   GCGCAAGAATTAGAA              GCCCGC CGAA GCGGGC               GTATGGGGCGCTAAT  77 97
        gloA 2298296 .. 2298347 -  -8.5  -2.85351   CTCCGGTATACCACA GCCAG-GTGCGCGGGGGCGGCGCGC CGAC GAGCG-CGCCCCCGGGGCCGCTGTC AGAACTCGGTCGGCT  58 24
LOY33_RS10265 2297950 .. 2297989 - -29.6  -3.62597   GTGACGGTGCAACAA  CGCAAAAGCCCTGACAGG TCAG CCTGTCAGGGCTTTTGCG   TGGCCTATTCGAACA 100 30
LOY33_RS10225 NONE
LOY33_RS10220 NONE
LOY33_RS10215 2289092 .. 2289102 -  -2.4  -3.45324   CATTCTCATCAAACA                 GCTC CAT GTGC                 ATGAGGTAATCGTTA  46 87
        modA 2288332 .. 2288345 -  -2.3  -2.79183   TCCAGTGGCATCAGA               GTTCG TAGC CGTAC                GACTTGATCACTTCA  39 7
        modB NONE
        modC NONE
LOY33_RS10195 NONE
        csrA 2284494 .. 2284516 -  -5.4  -3.74747   GCAAGGGGCATGAAA           GCCCTGGGCT GGC AGCCATGAGC           ACGATTCTGGTCGTG  57 461
LOY33_RS10170 NONE
LOY33_RS10165 2280581 .. 2280605 -  -2.2  -2.81173   ACCAATTCCACCACA         CTCGCA--CGGA TCA TCCGGCTGCAAG         GTCAGGCACAGGGTG  39 115
LOY33_RS10160 2280474 .. 2280489 - -11.8  -4.64846   GCAGAAAGCAGAAAA              GCGCCC CAAG GGGCGC               TTTTCAGAAGATGGT 100 37
LOY33_RS10155 NONE
LOY33_RS10150 NONE
LOY33_RS10145 NONE
LOY33_RS10140 NONE
LOY33_RS10135 2275742 .. 2275783 - -10.9   -3.6715   CCAGCCAAGCTGAAA CAG-CAACGCATTGCCCAGC ACC GCTGCCCAATGCGCTGTCCG CCGGTTCAGCCTGGT  78 31
LOY33_RS10130 2275235 .. 2275256 -  -5.1  -2.62263   ACCGCTCCTACATGA           CCAAGTTCG GCAT CGAAGTCGG            GCAGGTCACCTTGTT  44 31
LOY33_RS10110 2273324 .. 2273344 -   -14  -3.75332   AGGCTTGAACGCAAA            CGTCCGGC ACATG GCCGGACG            TTTGCGTAGTGGCAG  88 46
LOY33_RS10105 NONE
LOY33_RS10085 2270443 .. 2270457 -  -9.2  -3.14881   CAAGGGGGGGATGAA               GGGGCG CGT CACCCC               GCCTGCCGTTCCCGC  64 19
LOY33_RS10075 NONE
LOY33_RS10070 2269072 .. 2269106 -  -4.8  -3.61398   TCTCGTTTTGAAGAA    CTCGCCCGGGCGATG TCAGTG CTGCGCCGGGGCG-G     TGCCGCCATCGATAG  53 49
LOY33_RS10065 NONE
LOY33_RS10060 2268054 .. 2268066 - -10.5  -3.09516   CCGGTCACGATCCAA                GGCGC GAG GCGCC                AGAGGTGCCACTGCC  62 249
LOY33_RS10050 2266618 .. 2266642 - -12.1  -3.10715   CCGATCAGGACTGAA          CGCCAGCGCCC GGT AAGCGCTGGCA          CGATGCGTCACTCAA  73 33
LOY33_RS10035 2264661 .. 2264671 -  -3.2  -3.35542   GGCATCGCGAAAAAG                 CTCG ACG CAAG                 ACTTATCGGCCATCT  48 219
LOY33_RS10005 2258308 .. 2258351 -    -3  -5.40464   CACGAGAAACAAAAA GTGACAGAGGCGCTGCAAAA TAAA TCGTGCAGCGCCTTTTTTTC AGGTTTTGAAGCGCC  85 24
LOY33_RS10000 2255992 .. 2256034 - -16.3  -3.14564   GCATTTGGCCAGCAA CGCCGGCTCCTGCA-GGCTG CGTG CGCCCGTGCAGGAGCCGGCA ATGCCGGCGAAGGGG  88 42
LOY33_RS09995 2252968 .. 2252994 -  -8.7  -3.05343   GGCACATCCGCAAGA        TGCG-CGCCGAG TACG CCCAGCGCCGCA         GTTGCCTGCAGCAGT  55 375
LOY33_RS09985 NONE
LOY33_RS09980 2249196 .. 2249231 - -17.6  -3.14132   CCCCTTCGCCAGCAA    GGCTGGCTCCTGCACC AATC GTTGTAGGAGCCAGCC     TTGCTGGCGAAAGGG  91 66
LOY33_RS09965 2245566 .. 2245612 -  -2.1  -2.94333   TCGCAAAAGCAATGA CGGTAGAGGCGGCGCATTGTCC GCGC GGGCAACGGG-CGTGCCCACCG GCATTCCTCTGCGTG  40 138
LOY33_RS09960 2244217 .. 2244231 -  -8.5  -3.02263   ACAGCGCCGGCAAGA               CCGCC GAGGA GGCGG               GCGCGGCCAACGACA  55 283
LOY33_RS09945 NONE
LOY33_RS09940 NONE
LOY33_RS09935 2237685 .. 2237699 -  -5.6  -2.52543   AGGCCTCTCAATCGA               GCAGGC CAC GCGTGC               GTGCCGCATGGATGG  45 3
LOY33_RS09930 2235727 .. 2235765 - -13.1  -3.01712   CGTTCGTCGGCAAGA   CCGGCCTCTGCAGAG CAGCACAAC CCCCGCAGGGGCCGG   CCTTGCCGGCCAAGC  74 60
LOY33_RS09920 2232367 .. 2232380 -  -3.1  -3.07043   TGCATGATGTGAACA               TCCGT GGAT ACAGA                TCAGTTTCTCCTGAT  43 105
LOY33_RS09915 NONE
LOY33_RS09910 2231411 .. 2231424 -  -6.7  -3.33696   CCTTTGTGCAAGCAA               CGTAG CTGG CTACG                TTGCCTGTTTGGGCT  56 21
LOY33_RS09900 NONE
LOY33_RS09895 2227231 .. 2227247 -  -7.9  -4.86385   ACCTGGAAAAACAAA              GCCATGG CGG CCTTGGC              GAACATGGCTGTAGT  86 287
LOY33_RS09875 2223080 .. 2223108 - -10.9  -4.74103   TTCTTAACTGAAAAA        GCGCCACCTTACA AAA CGAAGGGTGGCGC        TGTACGCAGGTTGGT  95 275
LOY33_RS09865 2219993 .. 2220008 -  -4.7  -3.53012   CGGCGTTGCCTGAAA              TGTGG GTGTTA CCACA               TGTCTCAAAAGCTCA  52 514
LOY33_RS09835 NONE
LOY33_RS09830 2210326 .. 2210345 - -13.6  -4.06687   ATTCGTCAGAAAGAA            GGGCCACT GAAA AGTGGCCC             TTTTTTCGTTGCGCA  95 75
LOY33_RS09805 NONE
LOY33_RS09800 NONE
LOY33_RS09795 NONE
LOY33_RS09790 NONE
LOY33_RS09785 NONE
LOY33_RS09780 2197818 .. 2197833 -  -2.6  -2.62616   TCACCGGGTACATGA              CAG-TCT CCT AGAACTG              GAAGTAGAGGAAGGG  38 17
LOY33_RS09775 NONE
LOY33_RS09770 NONE
LOY33_RS09765 NONE
LOY33_RS09760 NONE
LOY33_RS09755 2191554 .. 2191567 -  -2.3  -4.07568   TGGCCGCGCCGAAAA               TCCCC TGAC GGGCA                CCCAAATGACCCCAA  56 452
LOY33_RS09740 2188792 .. 2188834 -  -8.3  -2.78384   CCGTCGCCGAGCAGA CCATTGCCCTGC-GCCAGGC CGAA GCCGGCCTGCAGGGCATCGA GGCGCAGCGCACCCA  52 480
LOY33_RS09725 2187183 .. 2187241 - -13.9  -3.02043   AAGGGCGGGGCAATA GTGGGACGGCCTTCGCCAGCAAGGCTG GCGCCTG CA-CCCTGCGGGCGAAGGCCGGGCC-C TCAGAACCAGCGGTC  79 26
LOY33_RS09715 NONE
LOY33_RS09710 NONE
        aroQ NONE
LOY33_RS09700 2181941 .. 2181963 - -15.6  -4.64861   CCCCTGCAAAAGAAA           TCGGCCGCCA GTC TGGCAGCCGA           TTGTTGATCAGCAAA 100 81
LOY33_RS09690 2181027 .. 2181041 -  -3.4  -2.69921   AAGCAGAAGAATGCA               CGGCTG CTG CTACCG               GTCGGCGCGTGTGTT  40 40
        fusA 2178842 .. 2178852 -  -3.2  -3.14931   TCGACCGTGCAGTAA                 TCGC GCG ACGA                 CCTAGCCCTGCTTTT  43 27
LOY33_RS09640 NONE
LOY33_RS09635 NONE
LOY33_RS09630 2161778 .. 2161789 -  -7.2  -3.06162   GACCCGACGCGAAGA                GGGG CAGG CCCC                 CAGCAGCCATTTTCA  51 499
LOY33_RS09605 2156197 .. 2156227 -    -6  -3.79251   CAGGTCATGACCAAA       CCGGTACGCAGC GTGAACA GCGACGAACCGG       CGGTGGCCCTGATCC  64 169
LOY33_RS09590 2153367 .. 2153386 -   -15  -5.24129   GTCGCCCACAAAAAA            GCCCCCGA CGGG TCGGGGGC             TTTGTGTGTGCATCA 100 126
LOY33_RS09585 NONE
LOY33_RS09580 NONE
        ppk2 2149556 .. 2149576 -    -4  -4.72127   GAAGAAGAAAAACAA            GCGCTA GGCCGCAGG TAGCGC            GCCATCCTGACGCGC  75 53
LOY33_RS09555 NONE
LOY33_RS09550 2146013 .. 2146044 -  -9.2   -2.5805   ACGACCGGGCAGAAT      CGCCCGCGGCACCG AGGA CGGCGCCGAGCGGG       TAGTGGCGGGGGATC  54 250
LOY33_RS09530 2142866 .. 2142900 -  -6.3  -3.73783   CAGCGAAGTCAACAA    GCTGATGGCGGCTGCC AAGT AGCCGCCCCC-CCAGC     GCTACCACGCCGTAT  61 27
LOY33_RS09520 2141681 .. 2141708 -  -7.6  -3.14931   CTGAGCGTGCAGGAA        GC-CTTGCGCGCC CGG GGCGTGCAGGTGC        CGGTGATCTTTGTCA  54 499
LOY33_RS09505 NONE
LOY33_RS09500 2135991 .. 2136006 - -10.4  -4.87291   TATTTGAACGAAAAA              CCACGC AAAT GCGTGG               TTTTTATCGTTTAAG 100 65
LOY33_RS09495 2134808 .. 2134821 -  -3.7  -3.40403   CTTCCTGCATTACAA               CCTGC CGTT GCTGG                CGTTCGGCTGGGTAG  49 89
LOY33_RS09485 2131060 .. 2131074 - -12.8  -3.53444   TGAGGTTGCTGGAAA               GCCCGC TGG GCGGGC               TGCGGGTGAGCATCG  74 72
LOY33_RS09460 NONE
        queD 2126820 .. 2126835 -    -9  -5.60993   GCGGGCATAAAAAAA              CCACCT TGGG AGGTGG               TTTTCAGATATGTCA 100 49
        rhtA 2119929 .. 2119952 -    -6  -3.51934   CTGTCCTTACAAAGA          GTGTCGGGTCT GCA AG-CCCGAGAC          GGTTACCTGCGCCTC  58 166
LOY33_RS09420 2119603 .. 2119622 - -13.6   -4.8048   CGGGCACATGAAAAA            GGGCAACC TGCG GGTTGCCC             TTTTTCGTTACTTGC 100 33
LOY33_RS09395 2112782 .. 2112806 -  -6.3  -3.25102   ACGTGAGCCAGAATA          TCCGGCGCCTG CGC CATGCGGCAGA          GCTGAGCCAGAGCGC  53 517
LOY33_RS09385 2111547 .. 2111557 -    -4  -3.02364   ACTATCAAGGACATA                 GATT TCT AATC                 TGCAGAGGTTTGTAA  45 163
LOY33_RS09380 NONE
LOY33_RS09375 NONE
LOY33_RS09370 2106593 .. 2106615 -  -5.4  -3.53224   CAGTGGCGCGGGAAA           CAGGCGCTTC ATG GCTGCACCTG           CCCGGCAATCGCCTC  55 11
LOY33_RS09365 NONE
LOY33_RS09360 NONE
LOY33_RS09355 2105174 .. 2105188 -  -3.5  -3.43785   GAGCAGATCAAGGAA               GGCCT GACCA AGACC               CTGAAGGCTGCCACG  49 310
LOY33_RS09260 2078549 .. 2078577 -  -4.5  -3.24022   AAAGGGGGATAAAAC        GGAATCAGATGTG CAG CACTTCCATTTCC        CGCAGCGCATCGGCC  49 1
LOY33_RS09255 2077289 .. 2077299 -  -4.6  -3.61398   CGGGGTGCTCAAGAA                 CGCC ATC GACG                 TCGGCTCGCGCCCGT  52 402
LOY33_RS09245 2076577 .. 2076598 - -17.3   -5.0916   GCGGTAACACAAAAA           GGGCGACCC GCAA GGGTCGCCC            TTTTTGTTTGCCTGA 100 81
LOY33_RS09230 2074666 .. 2074683 -  -9.1  -3.34192   AAGGCCGCCAATGAA             CTGGCCC AGGC AGGCCAG              GAGCAGGCGGCCCGC  61 86
LOY33_RS09220 2073178 .. 2073204 -  -2.1  -3.18366   GTGCCAAGGAAGAGA         CCAAGGCGTCG TCTAC CGTGACCCTGG         GCTTTGCTGCGGCGA  42 479
        nhaR 2071323 .. 2071341 -  -5.8  -3.75665   GGATAGCGTAGCAAA             GGCATGCC GCG GGCTAGCC             CTGCGGCGAAAGGGG  58 194
        sstT 2070009 .. 2070036 - -18.5   -5.1675   CCAGGCATGAAAAAA        GCCCGGCAAGG TCAACG CCTTGCCGGGC         TTTTTCATGCCTGCC 100 45
LOY33_RS09190 2068670 .. 2068681 -  -3.6  -3.07816   GCGGGAGCGACTGAA                CGCG CTCC CGCA                 AAGCATTGCTCGACC  45 55
LOY33_RS09180 NONE
LOY33_RS09175 NONE
        pbpG 2065743 .. 2065761 -  -6.7  -2.68088   GGCTAAATTTACAAC            CTCCG-GC GCGC GCTCGGAG             TTGTGGCTTCACGCT  48 90
        pvdM NONE
LOY33_RS09160 NONE
LOY33_RS09155 2061102 .. 2061114 - -10.5  -3.05596   CAGGCTGGTACGCAA                GCCGC AAC GCGGC                GTTCCAGCATGCGGT  60 402
LOY33_RS09105 2054236 .. 2054246 -  -4.6  -2.80994   GGCAAGTGTAGTAGA                 CCCG CGC CAGG                 GGTTTAGCGCAGTAC  44 29
LOY33_RS09100 2053170 .. 2053186 -  -4.4  -3.53224   CAGCGCCTCGGGAAA             GCCC-GT ACTC ACAGGGC              CGACTCGACCCTGGT  53 17
LOY33_RS09095 NONE
LOY33_RS09090 2051087 .. 2051100 -  -3.7  -3.55444   GCGGCAGTCGGTAAA               GGCCC TCCA GTGCC                ATTACCGGTCGAGTT  51 27
LOY33_RS09085 2048755 .. 2048779 - -13.6  -3.07113   CAGCAGGTCACCCAA         GGCCCCG-CCA GCAA TGGACGGGGCC          TTTTGGTTGGCGCGT  79 509
LOY33_RS09075 2047327 .. 2047337 -    -4  -5.27335   CGGGTTAAAGAAAAA                 TTCA TCT TGAA                 AAAGGGCTGCTGCGC  84 115
LOY33_RS09070 NONE
LOY33_RS09065 2045010 .. 2045027 -  -3.3  -3.82378   ACGTACCGACAAGAA             CTGGGCCG AAT CGGACC-G             CATCCGCGACCAGCT  56 208
LOY33_RS09050 NONE
        lpxH 2040495 .. 2040533 - -21.9  -3.01712   GCTTCGCCGGCAAGA   CCGGCTCCTACAGGATT ACGCA AAACCTGTAGGAGCCGG   CCTTGCCGGCGAAGG 100 43
LOY33_RS09015 2033575 .. 2033588 -  -8.1  -3.01712   GCTGCGCCTGGAACA               CCTGC TGGT GCAGG                TGATGGCGGCCAAGC  53 406
        acnB 2030360 .. 2030379 - -16.4  -5.31072   AGAAGACAACAAAAA            GCCCCGCC AATT GGCGGGGC             TTCTTTTCACGCTAA 100 47
LOY33_RS08970 NONE
LOY33_RS08965 NONE
LOY33_RS08960 NONE
        pabB 2017117 .. 2017175 - -13.4  -3.03124   GTTGAGCCTGTAATA CCGCCTTCTCCGGCAAGGCCGGCTCCTGCA CGC TGTAGGAGCCGGCCTTGCCGGCGAA----G CGTTCTAGAGGCCCT  79 30
LOY33_RS08945 2015478 .. 2015532 -  -5.4  -3.16564   CTGCCAGTGCATTAA GCCCTTGCAGTGCCTTCAGGCCGCCA GCA CGGTGGCCTGAAGGCGCTCCTGCAGA TAGCCCCGCGAGCAG  49 127
LOY33_RS08925 2011480 .. 2011510 - -25.6  -4.08394   ACACCCTGTTGAAAA       CGAAAACGCCGGGC ATT GCCCGGCGTTTTCG       TTGATGGCTTTCAGC 100 36
        oprI 2010369 .. 2010390 - -15.9   -5.4833   GCAGGCAATAAAAAA           GCCGACCCA CAGG TGGGTCGGC            TTTTTAACAATCCCG 100 49
LOY33_RS08895 NONE
LOY33_RS08890 NONE
        greB 2004343 .. 2004357 -  -3.4  -3.53012   TGGCCCCGCCCCAAA               GGCCGC GCC ACGGCG               TTCCTGATCCAGTTC  49 189
LOY33_RS08865 2000924 .. 2000939 -    -4  -2.91322   ATATGCGTCAAACTA              TGTCGGG GAG CCCGA-A              GAAGCGCCGGGCGCA  44 2
LOY33_RS08860 1999291 .. 1999349 -  -6.8  -4.14392   CCTCAAGGTGCAAAA CG-GATAACCCAAGCGTAGTTTGGCCCCC GCCA GGGGGCCAAT-TGCGCGCGG-CTATCGCG TTTATAGCTTGAGTT  71 27
LOY33_RS08855 1998860 .. 1998872 -  -4.7  -3.16564   GCCGCACCTGAGCAA                GCCCG CTG CCGGC                AGCACCCTGACCTGG  47 213
LOY33_RS08835 1995789 .. 1995824 -    -6  -2.79183   CCCATGTGGAGGACA    GCCACTACCTGCGCATC GTG GTGGCGCATGT-GCGGC    AGAAACTGGGGGACG  47 131
LOY33_RS08755 NONE
LOY33_RS08750 NONE
LOY33_RS08745 1976217 .. 1976232 -  -4.6  -4.19817   CCGACCGACCCAAAA              GCCTCA GGCT TGGGGC               GGCAGCCTACACATA  64 157
        fabA NONE
        fabB 1974364 .. 1974384 -   -14  -5.27938   AGCCGCAAACAAAAA            CGCCCCGA ACCAG TCGGGGCG            TTTCTACAGCAGGGG 100 52
LOY33_RS08715 1969870 .. 1969892 -  -3.3   -2.8499   AGGCAAGATGAAGTA          CGACGCCAGG ACGT CCAAGCG-CG           CGTTCCAGGCGATGC  41 133
LOY33_RS08690 1965729 .. 1965744 - -10.4  -5.21709   CCTGACATGAAAAAA              CCCGAC CTGA GTCGGG               TTTTTTCATTAAAGC 100 49
        gltA 1949708 .. 1949739 - -18.2  -3.06831   TGAAGCGTTACGCAA      CAAAAAAGGCTGCC CGAG GGCAGCCTTTCTTG       TTGTTGCAGGCGAGC 100 49
LOY33_RS08575 1940371 .. 1940397 - -15.9  -4.72272   CGCCTTCACGAAAAA        GCCCCCAGCGCC GCAA GGCG-TGGGGGC         TTTTTTTGTGGGCTG 100 44
LOY33_RS08555 NONE
LOY33_RS08550 NONE
LOY33_RS08545 1932780 .. 1932834 -    -9  -2.62184   GCTGGGTCGATATCA GGCAGCCCTGGCTGGGCCCTGTGACC CAT GGTTGCAGCACCACGCCAGGCCTGCA GCCGGGCAAGAGCGT  54 198
LOY33_RS08535 1930163 .. 1930176 -  -2.3  -2.96695   GCGGTCATGAAACTA               CCTCG GTCG CGACG                TGGCTACGTGCTAAG  40 144
LOY33_RS08530 1928462 .. 1928503 -  -5.6  -3.57792   CGATTTAGTTGCAAA GGCGGGCAGCGGCGAGCG GCGGTG CGCTCGCCGGTTCAAGGC  ATTCAGGCGAAGACT  55 28
LOY33_RS08525 1915952 .. 1915962 -  -6.8  -3.15544   CGGGAGGGTGATGAA                 TCGC TTG GCGA                 TCCGTGCAGCCATGT  54 50
LOY33_RS08515 1904131 .. 1904181 -    -4  -3.53224   GAGGTTCCTTGCAAA GCTATCGGTA--AGCGCCGCCCCG GCTGA CGGGGCGGCGGTGGTATCAACAGG TGACGCTGTGGCTTT  51 18
LOY33_RS08510 1903112 .. 1903129 - -12.7  -5.27923   CAACGCCACAAAAAA             GCCCGCA ACGC TGCGGGC              TTTTTCATGGGCGCC 100 52
LOY33_RS08465 1871523 .. 1871564 - -14.6  -4.00683   AAAAATGCAAGCAAA TGTTTCCAAGGCTCCCGGC CTGCC GCCCGGAGCCCTGGAAA-A CGCCTGCGGTCCTAC 100 37
LOY33_RS08460 NONE
LOY33_RS08455 1869636 .. 1869652 -  -2.2  -3.90318   GCAGCAGGTCAGAAA              CAGGCA TCATT TGCCTC              CTTGTTTTTGAAGCC  53 15
LOY33_RS08450 NONE
LOY33_RS08445 NONE
LOY33_RS08440 NONE
LOY33_RS08435 NONE
LOY33_RS08430 NONE
LOY33_RS08425 1865165 .. 1865188 - -14.6  -4.27316   CGGCGCAACTGAAAA          GCCCCAG-GCG TTG CGCACTGGGGC          TTTGTTTTTGCCGAC 100 42
LOY33_RS08415 1862150 .. 1862169 - -11.4  -3.24825   TTATCTCAAGGAACA            CGACGTGG CCGC CCACGCCG             AGGCCATGGGCGCAC  68 373
        dsbD NONE
LOY33_RS08385 NONE
        dsbG 1854827 .. 1854880 - -10.9  -4.20367   CGGCCGAACAAACAA GGCTGACAACACCGATCCTGCAGGC CATG GCCTGTGGGATTTGCATCGCCAGCC CTGGTGCCCGGCTTC  88 65
LOY33_RS08365 1839321 .. 1839335 -  -3.5  -3.84246   CGGCGAACCAGCAAA              GGC-GC TCGT GCTGCC               GGACACCCGGCATCT  55 103
LOY33_RS08350 1836653 .. 1836675 -    -4  -5.07107   GAAAGGGGCAAAAAA           GGGCTGGCCA GTA TGCCCAAGCC           TCCCGGTGGCGTCAT  81 47
LOY33_RS08345 1836061 .. 1836088 -  -6.9  -3.14878   TGGCCGAACTGAAGA        CGCCAACCCTG ATCGTG CAGGGCGAGCG         TGATGCGCTGGGCAA  52 279
        ccoN NONE
        ccoO NONE
LOY33_RS08325 NONE
        ccoP 1832012 .. 1832022 -  -6.8  -3.52192   GGGAAGTGTACACAA                 TCGC AAG GCGA                 TAATGTGCACCATTA  60 346
        ccoN NONE
        ccoO NONE
LOY33_RS08305 NONE
        ccoP 1828576 .. 1828602 - -21.6  -5.06414   CTGCGCCAATAAAAA         GGCCCCGCCAGC AAC ACTGGCGGGGCC         TTTTCACAGCCGGGG 100 46
        ccoG NONE
LOY33_RS08290 NONE
LOY33_RS08285 NONE
        ccoS 1823578 .. 1823592 -    -7  -2.75535   GCAACAGGTCAAGCA               CGGGGC GGG GCGCCG               CTGTCGTCGGGCTTG  51 4
LOY33_RS08275 NONE
        hemN 1821160 .. 1821178 -  -5.2   -3.7829   AGGACATCGAGGAAA             GCGGTCTG CCC CAGACCAT             CCAGCAGACCCTCAA  60 277
        fnrA 1820054 .. 1820067 -  -3.8  -2.80935   ACGCCAGCCAGTATA               CCTG CTGCGC CAGG                TGTCAGCTGTCCAGC  43 28
LOY33_RS08255 1819473 .. 1819485 -  -7.7  -3.13403   GCGGCCCCATCAATA                TTCGC TAA GCGAA                AACTCGGTCAGGCAG  57 7
        bcsQ NONE
        bcsA 1812269 .. 1812284 -  -2.6  -3.14132   GTTGGTCGGTATGAA              GCA-TGA CGG TCATTGC              GAGTCCAACGAAGGT  41 19
        bcsB NONE
        bcsZ NONE
LOY33_RS08215 NONE
LOY33_RS08210 NONE
LOY33_RS08205 NONE
LOY33_RS08200 NONE
LOY33_RS08195 1800633 .. 1800644 -  -4.4  -3.05463   ATGGCGGGTATCGAA                GAAC TGAG GTTC                 GTGGTGCAAGCCGGC  45 190
LOY33_RS08185 1799685 .. 1799713 -   -11  -4.72272   CGCGCGCACGAAAAA        TGCCTGCGACCG GATCA CTGTCGCAGACA        CCTCACTCTCTTCAG  95 46
        xdhA NONE
        xdhB NONE
        xdhC NONE
        guaD 1783834 .. 1783854 -  -2.4  -3.15249   GATACCGGTTACCAA            CACGTCGG TGAAC CCGGCACG            CAGCACCGGGCCGGC  42 149
LOY33_RS08120 1780568 .. 1780587 - -12.8  -5.12068   CACAGGCAACAAAAA            GCCCCGCC CGAA GGCGAGGC             TCCTTGAACCGACGC 100 46
        puuE NONE
        uraD NONE
LOY33_RS08100 1777630 .. 1777641 -  -4.4  -3.08992   AGCCATTCCAACAGA                TGTG CTTC CACA                 GTCTTTACCTCTTGC  47 72
LOY33_RS08095 1776263 .. 1776274 -  -3.6  -3.61398   CCTGCTTGCGAAGAA                GCAG GAGG CCGC                 GCCTGGCTTGCAGCT  51 66
LOY33_RS08090 1774758 .. 1774799 -  -5.8  -3.53012   TTTTTTCGGCGCAAA CGC-GCCCCGAGCGGCCCACT CCC AG-GGGCCGA-CGGTACTGCG TGGTGCTCGGGTTGA  55 68
LOY33_RS08085 1773673 .. 1773702 -   -10  -3.01791   AGCGCGTTCGCAAGA       GCTGAGCCAACC TTGGCG GGTTGGCGCAAC        GGGCCTGCTCGACGT  64 243
LOY33_RS08080 1772477 .. 1772501 -  -4.3  -4.33274   CCTACATGATGAAAA         GCCTGTCGGTG ATCGG CACCG-C-GGC         GATGTTCCTGGTAGG  69 305
LOY33_RS08070 NONE
         gcl 1768422 .. 1768455 -  -4.7  -4.07568   TGTCTCCTTGCAAAA    GT-G-GGCCCTG-TGC GCGGG GCAGCAGGGCCGCTAC    AACAGTCAGTCGAGC  62 31
         hyi NONE
LOY33_RS08050 1766464 .. 1766503 - -19.3   -4.3208   TTGCAGAATCGAAAA  CGCCCCTGGGCCTGCCT CCGTGC AGACGGGCCCAAGGGCG   GGTGGTGCTCTTTAG 100 130
LOY33_RS08045 NONE
         pyk NONE
LOY33_RS08035 1762708 .. 1762721 -  -3.1  -2.83255   ACAAGATGGAGCAGA               GCCTAG GGG CT-GGC               CCGCAGCTGTGCAAG  41 14
LOY33_RS08030 1761791 .. 1761801 -  -6.8  -3.86897   TCGAGTTGGGAGAAA                 GGCA TTA TGCC                 AGCGACTATAGCGGC  66 78
LOY33_RS08025 1760721 .. 1760745 - -19.3  -5.24129   GCCGGCCACAAAAAA          TCCGGGGCCCG TCA CAGGCCCCGGA          TTCGTCACCCGGCCT 100 40
LOY33_RS08020 NONE
LOY33_RS08015 1757976 .. 1758009 - -13.2  -3.06796   CTGCAGGTGAGCCAA    CGGCAC-C-CCCGCGC AGTG GCGCAGGCGTGTGCCG     GTACGGGCAGCGGCA  76 57
LOY33_RS08010 1755803 .. 1755817 -  -4.2  -3.35679   CCGGCCCAGTCAGAA               GCGG GTCTGCA CCGC               CAGTTCGAAGGTGCG  49 5
LOY33_RS08005 1753905 .. 1753937 -  -8.5  -3.03159   GCAAGGTGCGCAAGA     GCGGGCCGTATGAC CTGATC ATCAT-CGACCCGC      CGACGTTCCAGAAGG  55 385
LOY33_RS07990 NONE
LOY33_RS07985 1750731 .. 1750747 -  -7.9  -2.98219   AACGGCATCAGAAAG              GCTCCAC GCT GTGGCGC              TGCCACACCAGTTGC  56 1
LOY33_RS07980 1749535 .. 1749582 -    -9  -4.42386   GCGCCATGCAGAAAA GCCCGGCGAAGGCCTCGGGCAAC TGA ACTGCCAG-GGCCTCAACCGCGC CCTGGACCTGGCCAC  83 489
LOY33_RS07950 1745084 .. 1745100 -  -4.4  -4.74801   CAACCCCAGGAAAAA             CAC-GGC AGCT GCCTGTG              CGGCGCCATTCACCT  79 394
LOY33_RS07885 NONE
LOY33_RS07880 1734526 .. 1734538 -  -9.1  -3.21747   CGAGCTGATGAGCAA                GCTGC ACC GCAGC                TGATGCAAGGCCCCC  63 54
LOY33_RS07700 1700089 .. 1700109 -    -4  -4.21631   AACGTATCGAACAAA           CCCGCGAAGC CCT GCT-CG-GGG           CATTGGCCAGCCGCG  65 365
LOY33_RS07585 1671893 .. 1671904 -    -3  -4.36931   GAATTGACATTAAAA                TTTG ACGC CAAA                 AGGGCGCAGGGTGGG  64 8
LOY33_RS07580 1669107 .. 1669130 - -18.2  -5.01042   AAGTGAAACGAAAAA          GGCCGGTGTC GCGA GACACCGGCC           TTTTTCATGCAGCTG 100 48
        flgA 1666423 .. 1666437 -  -7.1  -4.27617   CACAGTTTAGGAAAA               GCGGT TCCTG ACCGC               CAGCCTTGTTTGTTC  74 58
        flgM 1665970 .. 1665987 -  -2.5  -2.52543   AGCGTCCTGAAGTCA             GCGCGCC AGAG GGCTAGC              GCTGGGCTTCGAAAT  38 21
LOY33_RS07555 1665425 .. 1665445 -  -9.7  -3.18086   AAACGACACAGGCAA            TTGCTGGCA TTC TGCCAGCAT            GAATCGTGCCTTGAT  66 49
LOY33_RS07550 1664300 .. 1664310 -  -6.8  -3.16055   CAAAGCGGTTACCAA                 CCTG CAT CAGG                 TCGAGGATGCGCCAT  52 360
LOY33_RS07530 NONE
LOY33_RS07525 NONE
LOY33_RS07520 NONE
        lpdA 1655807 .. 1655854 - -13.4  -3.01745   GCGGCAAGAACCAGA TCGCCTGATGC-CTGGGCGTCGA TGA TCGACGCCCAGTGGTTCTGGCTA CAGGTGCAACGCGTG  77 23
LOY33_RS07505 1653916 .. 1653931 -    -9  -5.60993   GCGGGCATAAAAAAA              CCACCT TGGG AGGTGG               TTTTTTACGTAATAC 100 44
LOY33_RS07460 1646014 .. 1646029 - -10.4  -5.66684   CAAGGCATAAAAAAA              GCCAGC GAAA GCTGGC               TTTTTTGTGCGTGGG 100 46
LOY33_RS07415 1637820 .. 1637830 -  -3.2  -3.26947   GAACGGCGAGATCAA                 GCTC GGC AAGC                 TCGAAGCGCGGCTCA  46 426
LOY33_RS07345 1622726 .. 1622743 -  -4.1  -3.63991   CACCATTGCCAACAA             GTTGCGT GATT ACGCAAT              CGGCAAAGTTGTGGA  54 132
        phhA NONE
LOY33_RS07330 NONE
LOY33_RS07325 1618379 .. 1618394 -  -6.8  -2.77233   TTATAAGGTGGAAAG              GCTGCGC AAG GCGC-GC              TTGGCTTCGATAAAG  51 179
LOY33_RS07320 1618155 .. 1618166 -  -7.2  -4.07568   TTGGCGGTGTGAAAA                CCCG TTGC CGGG                 GTCGTCCCCTGTCGT  68 72
LOY33_RS07315 1616390 .. 1616408 - -13.1  -3.90588   GATGCTGCAATGAAA             GCCCGGC CTTGT GCCGGGC             TTTTTGGTTTTGTGC  87 493
LOY33_RS07275 NONE
LOY33_RS07270 1608902 .. 1608949 - -12.8  -2.57881   GAAGGTGCGCAGAAG GTAAGGCGAACCGGCGCGACGAA GGG CTCGTCGCGCCGATCAGG-TTAC GGCAGGACCTGCTTG  71 22
LOY33_RS07265 NONE
LOY33_RS07260 NONE
LOY33_RS07255 1607037 .. 1607062 - -20.5  -4.15396   CCTCAAACGAAAGAA         GCCCGACCTGC GGGG GCAGGTCGGGC          GGGGTGTGGACAGCT 100 40
LOY33_RS07250 1605591 .. 1605648 -  -7.6  -2.71712   CTTTCGCTGGCAAAG CCAGCTCCCACAGGTGCG-CACTTGCCC TGGA GGACG-GTGACATGCCTGTGGGGGCCGG CTTGCCAGCGAAGAA  54 59
LOY33_RS07240 1603081 .. 1603099 -  -4.4  -3.53012   CGCGTTTTTCCGAAA             GCCGGGTG ACC CACCGTGC             ACGTCAGGTGCTGTG  52 361
LOY33_RS07230 1601687 .. 1601732 -  -8.4  -2.53213   GAATGCGTCAAGCGA GGGTTTCA-CGGGGTGG-TGTG CGGG CACATCCACCACGCCGAAATCC GCAAGGTGGGGGAGG  51 215
LOY33_RS07220 1600042 .. 1600062 -  -6.7  -2.82623   CCTGGGCCACAACGA            CCGCGCCTG ACT CAGCCGCCG            GAGGTGGCGGGTGCG  49 16
LOY33_RS07210 1597453 .. 1597486 - -12.4  -3.44998   CATCGACGAAGAAGA     GCTGCGCGTGTGCA TGCGGG TGCACGCGCGCATC      CTGGGCAACCTGGAG  76 46
LOY33_RS07195 NONE
LOY33_RS07190 1593237 .. 1593252 - -10.4  -2.58544   CTGCAGGGCGAGAAC              GCGACG TCGG CGTCGC               TGGACGATTACCTGC  57 389
LOY33_RS07180 NONE
LOY33_RS07175 NONE
LOY33_RS07170 1580470 .. 1580484 - -11.4   -3.0263   ACCATGCCTTGAACA               CCGCCA GGC TGGCGG               CGCTTGGCCTGCGCA  65 478
        speB NONE
LOY33_RS07145 1574640 .. 1574668 - -16.8  -2.72144   GGATGGCCCGTAAAG       CGCCGA-CGGGCA GGGA TGCCCGTTCGGCG        TGGCCCCACGGAGCG  87 330
LOY33_RS07130 NONE
LOY33_RS07115 1569894 .. 1569905 -  -2.2  -3.81428   ATCAAGGAAGTCAAA                GGCA CCTA TACC                 GGGCCGAAGAAGGTC  54 292
LOY33_RS07105 1567180 .. 1567208 - -14.6  -3.62046   GTACTGGTGGAACAA       GGGCGCCTGCCTG GTTT CAGGC-GGCACCC        TGGCGGTGATGAACA  88 142
LOY33_RS07075 1562344 .. 1562354 -  -2.4  -3.35597   TTCATGTTCGAAATA                 GGCC ATG GGCG                 TTACCTGTCAGGCTT  46 33
LOY33_RS07070 1561544 .. 1561559 -  -3.3  -3.21099   TTTTTTCAGCATGAA              CTCAA TGATCC TTGAG               AAGTGGTTGAAGCCG  45 0
LOY33_RS07065 NONE
LOY33_RS07060 1559040 .. 1559050 -  -6.8  -3.65351   GCAGGCGCAGTGAAA                 TCCC TGT GGGA                 GCGGGCTTGACCCGC  63 60
LOY33_RS07025 NONE
LOY33_RS07020 1546841 .. 1546851 -  -2.4  -3.30124   TGTCACGGCGTACAA                 GGTG CCG CGCC                 TGATCGAGTTCCGCG  44 223
LOY33_RS07005 NONE
LOY33_RS07000 NONE
LOY33_RS06995 1540770 .. 1540787 -  -3.3  -4.15854   AAACGCACGGCAAAA             CGTTCCA AGGA CGGGACG              GCAGGCTTTTTGCCG  60 79
LOY33_RS06970 NONE
LOY33_RS06965 NONE
         ada 1534916 .. 1534933 -  -9.1  -3.11768   CCACACCATCGAATA             CCG-CGCC ATG GGCGACGG             CTGCAGCCAGGGCTG  60 45
LOY33_RS06950 1533952 .. 1533966 -  -4.2  -2.50113   CATGACTTCAGCAAG               TTCGGT TAT ACCGAG               GTGCTGTTCCCGGGG  40 16
LOY33_RS06930 1530340 .. 1530363 -  -4.4  -4.19735   GCGCTGAAAACTAAA          GCGGGGCCTG CTGA CAGGGCCGAC           CATTTGCAGACAATC  64 70
LOY33_RS06925 1529530 .. 1529540 -  -8.2  -3.72576   TGGTGGTCGAGGAAA                 CCCC GAT GGGG                 TTCAAGGCCATCATC  65 377
LOY33_RS06915 1527628 .. 1527668 -  -6.8  -3.14132   CGGGCTGGCGATCAA GCAAC-TGGCGGCGGCGAA CATC TTCCCCGGCGACATGCTGC  TGAAGAACTTTGGCG  52 437
LOY33_RS06905 1524765 .. 1524791 -  -2.9  -3.37796   CTCGATCATGCAGAA        GCGCATCACCAG CAAC CCGGTGG-GCAC         GCTGCCCTTGCAGTA  48 365
LOY33_RS06885 1520434 .. 1520446 -  -3.4  -2.76422   GATCCTCAAAAAATG                GTCA TGCGG TGAC                TATCATGCGACGACT  41 171
LOY33_RS06880 NONE
LOY33_RS06875 1518300 .. 1518313 -  -3.8  -2.62983   GGCATGGCGAGAGCA               GCAG GTTTAT CTGC                AGAGGTTTGCCGACT  42 83
LOY33_RS06840 1511948 .. 1511958 -  -3.2  -3.51924   TGCTGATTCAGACAA                 CAGA AAT CCTG                 AATTACACCAGGCCC  49 28
LOY33_RS06835 1511026 .. 1511038 -  -4.8  -2.82327   TTCGGACAGGCAAAC                CGCA GCGCT TGCG                CGTAGCCTGTAGGCA  44 338
LOY33_RS06825 NONE
LOY33_RS06820 NONE
LOY33_RS06815 1509376 .. 1509398 -  -7.6  -4.19953   CAGGCAAGGTGAAAA           GGTCACCACG CTG CGCGGCGAGC           AGATCACCGATGCGG  74 234
LOY33_RS06800 1507081 .. 1507091 -  -4.6   -3.6682   GGCTACTGACTGAAA                 CCGC GTC GCAG                 CCTTCGTTGGCAAGG  56 108
LOY33_RS06770 1501876 .. 1501898 - -14.9  -4.24342   GGCCTGATCAAGAAA           CCCCGACAC GCCAA GTGTCGGGG           TTTTTTTTGGCTTGC 100 128
LOY33_RS06720 NONE
LOY33_RS06715 1493067 .. 1493087 -  -3.8  -2.71011   ACTGGGCCTGAATTA            TGCGGCGC TGCTT GCGCTGCT            GGTGGGGTTGTCGGT  41 393
LOY33_RS06700 1490450 .. 1490504 - -19.3  -2.74322   GGCAACGCCTGAAAG CAGCATCGCGGGTCGAGCCCGCTCCC ACAA GGGGGCGGGGCTGACCCGCGATA-TG GTGTGCGCGCTACCT 100 50
        mgtA 1480376 .. 1480394 -  -6.6  -3.29144   CCACGTTCTTCAGAA             CCACTGCT TGA AGCGGCGG             ATGTACAAGGTCTTC  54 1
LOY33_RS06660 1479846 .. 1479868 - -14.2  -4.12188   CCACCATTTCGAAAA           CCCGCTTTCC ATG AGAAAGCGGG           TTTTTTTTCGTCTGT 100 151
LOY33_RS06565 1465212 .. 1465238 - -15.9  -6.07627   AGGCGTAAAAAAAAA        CCGCGATCGGCC GAGT GGCCG-TCGCGG         TTCTTCACGCGAGGA 100 41
LOY33_RS06550 1462393 .. 1462421 - -21.9  -4.70583   TGCATCAACACAAAA        GAAAAAGCCCGGC AGG GCCGGGCTTTTTC        GAGCTGGGGTCCGTG 100 52
LOY33_RS06545 NONE
LOY33_RS06540 1459555 .. 1459582 - -21.4   -3.6502   CACGCCCGAGTGAAA        CGCCAGGCATCG TGGT CGATGCCTGGCG         TTCATGGTGCTGGAG 100 41
LOY33_RS06530 1458166 .. 1458185 - -12.2   -5.4505   GCGCCCAACAAAAAA            GGCCACTT TTTC AAGTGGCC             TTCTCTGATGTTTGG 100 38
LOY33_RS06525 1457955 .. 1457976 - -13.1   -5.1287   GCCAGACGCAAAAAA           GGCCACTTT TTTC AAAGTGGCC            TTTCCTGTTGTTTGG 100 38
        mprF NONE
LOY33_RS06515 1453680 .. 1453690 -  -6.8  -3.61398   CTTCCTGCTGAAGAA                 TGCC AAC GGCA                 ACCTGAGGTTCTTCA  58 165
        rimO 1450212 .. 1450232 - -14.7  -5.09204   ATAGTCCAATAAAAA            GCCCCGCCA TGA TGGCAGGGC            TTTTCCAGGCCGCAA 100 45
LOY33_RS06500 1449620 .. 1449644 -  -7.8  -3.05384   GCCCGGGCGAGCGAA         GGCCCGGCTAC ATTC GT-GCCGGGCG          GCTATTAATGCCGTG  57 76
LOY33_RS06495 1448830 .. 1448841 -  -2.2  -3.17219   GACAATCCTGATCAA                GTGGC AAC GCC-C                GAGTGGCGAGGCCTA  41 38
LOY33_RS06490 NONE
        tsaA 1447558 .. 1447575 - -11.3  -5.52023   AGTACCAATAAAAAA             CGCAGAC CTTG GTCTGCG              TTTTTTTTTGCCCTG 100 98
LOY33_RS06475 1445634 .. 1445670 - -11.6  -3.61398   CCCGTTGTCCAAGAA   CGCCAAGGACATGGGCA GTGC TGCCCA-GTTCGTGGCG    TTGAGCATCGTGGCG  72 64
LOY33_RS06455 1442881 .. 1442929 - -11.9  -2.52464   CGGGGCCTGAAGTGA CAAGGCCTGTA-GTGAC-CGTGC GTAGA GTACGCGTCACATTCAGGCCTTG ATCGCTGAGCTGCGC  68 77
LOY33_RS06450 1441134 .. 1441154 -  -5.3  -3.22298   TTGATCGACCAGGAA            CTCGACCGT CTG ACGGAAGAG            GGCCTGCTCAGCGAA  51 388
LOY33_RS06330 1422857 .. 1422870 -  -9.5  -3.85817   ACGCTTTCTCAGAAA               CCCGC CCCG GCGGG                TTTTTTGTGCCTGCT  75 129
        mutS 1419313 .. 1419336 -  -2.2  -3.65522   GAGCCAGGCTAATAA          CTCGCTGCCC CGCC GAACCGCGCG           GGATTCTATCAGTTT  51 54
LOY33_RS06315 1418866 .. 1418879 -  -9.5  -5.80817   GCGAACATAAAAAAA               GGCCC CGAA GGGCC                TTTTTCATTGATCCG 100 48
LOY33_RS06270 1409813 .. 1409825 -  -6.2  -2.71364   CGAGCTGGCGAATGA                CCCG GTGGG CGGG                CTGCTGGCGGTGCCG  47 424
         map NONE
LOY33_RS06145 NONE
        dapC NONE
LOY33_RS06135 1378171 .. 1378201 -    -8  -3.17075   GGCCGGTCAAGTGAA       GTGCTCGGGGTCGC ATG GCGGCCCCGCGCTG       AGGGGCAGTCGCGCG  57 103
        pncA NONE
LOY33_RS06120 NONE
        dapD NONE
LOY33_RS06110 NONE
LOY33_RS06105 1372477 .. 1372504 -  -2.4  -3.86194   AAGGCCGTGGAGAAA        CTGGTGGGTGGC AAGC GCCGCCCGGCCG         ATCGCGTAGCGGCTC  54 39
LOY33_RS06095 NONE
        dapE NONE
LOY33_RS06085 NONE
LOY33_RS06080 1366155 .. 1366166 -  -7.2  -3.87994   ACCCAGGGCCAGAAA                GGCC TGCA GGCC                 GAAGACGTAGTGGGG  66 155
        plsB NONE
LOY33_RS06065 NONE
LOY33_RS06060 NONE
LOY33_RS06045 1356546 .. 1356579 -  -8.8  -2.56095   GCCAGATGCAACTGA     TCGAGCGCCAGCCGC TGGTG GCGGC-GCTGCTCGA     GGATGGCCTGGCGCG  52 405
LOY33_RS06035 1354988 .. 1355018 -  -7.6  -3.25823   GCTGCGCTACAGCAA      GCAGGCCGACAGC GCGCCA GATGT-GGCCTGC       CCGCTGCACAACGTG  56 466
LOY33_RS05995 1347481 .. 1347492 -  -4.4   -2.7782   GAATTCCGTAACAAT                CCAT CGGC ATGG                 CCCGTCAGCCTGGGG  44 350
LOY33_RS05990 NONE
LOY33_RS05985 1346146 .. 1346167 - -10.9  -5.81412   GGCAGGCAAAAAAAA           TCCCGCCCTG TAA CAGG-CGGGA           TTCTGCGGGTTGCTC 100 47
LOY33_RS05980 1341422 .. 1341468 - -18.7  -3.21416   CAGGTCCAGCAGTAA GCGGTTCCCGGTACGCCGCGTG AATA CCTGCGGCGTACCGGGCA-CGC GTCAGCTACGTGACG 100 27
LOY33_RS05900 1324048 .. 1324060 -  -6.2  -3.04144   CCTTGACGGCGAAGA                GGCC CTAAC GGCC                GCCCATGATCGCGAT  52 17
LOY33_RS05895 NONE
LOY33_RS05890 NONE
LOY33_RS05885 NONE
LOY33_RS05880 1319694 .. 1319710 - -15.1  -3.61103   GAAGGCTACGCCAAA              GGGCCGC CGA GCGGCCC              TCCTGCGCAGGTAAC  88 61
LOY33_RS05860 NONE
LOY33_RS05855 1313743 .. 1313754 -  -7.2  -2.61144   GCAGCCCTCAAACAT                GCCC GCCA GGGC                 CGCGCGCAAATCGTT  50 221
LOY33_RS05820 1305787 .. 1305802 - -10.4  -4.67048   CCATGCGAAAAGAAA              GCAGCC TTCG GGCTGC               TTTTTTGTTGTCCGT  90 491
        ccsA NONE
LOY33_RS05780 1299977 .. 1299988 -  -2.2  -3.57971   ATAGCTAGCGGGAAA                CGGT CCAG ACCA                 GTATGCGGCTGGCGC  47 3
LOY33_RS05775 1298427 .. 1298455 -  -4.3  -3.07113   GACGAGTCGATCGAA        GCCGCGCGGGCCA AGG CGACCCGGGCTTC        GCAGGCAGTCAGCGT  45 152
LOY33_RS05745 1294649 .. 1294662 -  -5.2  -2.52676   TATGGGTTCAAGTGA               GCGG TTCGAC CCGC                GGGGACAGGCATTCG  45 4
LOY33_RS05740 NONE
LOY33_RS05675 1280722 .. 1280732 -  -5.4  -3.42395   TGTATGAGGGAAAGA                 TGAG CCG CTCA                 CTGCTGAGCCGGGTG  53 326
        tatA 1279678 .. 1279696 -  -3.8  -3.54741   CAGCAGCTCGGTAAA             GCCGATCT CGA ACATCAGC             TGCGTTGTTCCGGTT  51 21
        tatB NONE
        tatC 1278578 .. 1278592 -  -4.9  -2.79183   GCCACCCCTACGAGA               CCCCG GCCTA CGAGG               TCTGGCAGCTCGCTG  44 95
        mltF 1272328 .. 1272363 -  -7.4  -3.57144   GCGCGCACGCCGAAA    TGGTGGCCATTCGCGC GGCG GCGCAGGCGGCCAGCA     ACTACCGGCTGCCGG  60 367
LOY33_RS05625 1267581 .. 1267611 -  -9.5  -2.84098   TGCGGTAAGTAAGTA       GTGCGGGCCGCCC AGCCA GCCCGGCCCGCTC       AGGCAGCAAGCAACG  61 54
LOY33_RS05620 1264530 .. 1264553 - -18.2  -3.53031   GCGAGGCGAAAGCAA          GGGCAAGGCC AGGC GGCCTTGCCC           TTTTTCATCGCCGCC 100 50
LOY33_RS05590 1256989 .. 1257008 -    -7  -2.91264   CTGGCCACCGAGACA            CCGCCGGC GCCC GCCGAAGG             CTGAACTCAGGCTGC  53 32
LOY33_RS05550 1251061 .. 1251092 -   -21  -3.91897   CCCGCCAGCCAGAAA      GCCAAAAGCCCGCC TAAT AGCGGGCTTTTGGC       TTTCTGGCTGGCGGC 100 61
LOY33_RS05425 1224926 .. 1224949 -  -2.4  -3.53012   TTCTCTCCGCCGAAA          CACGATCCAA ACTG TTGGATGTTG           TTAGCTCGGACAAAC  48 175
LOY33_RS05405 1221740 .. 1221769 - -10.6  -3.59979   GCCGTGGAGCTGAAA       TCGCCCCTGCCG ATCGAG CGGCAGGCGCGG        GTGATCGGCGCGACC  70 508
LOY33_RS05355 NONE
LOY33_RS05350 1213250 .. 1213262 -  -4.8  -3.57971   ACACTGATTCCGAAA                GGCA TATGG TGCC                TGGTGCTGAATGTTT  53 167
LOY33_RS05345 1212179 .. 1212231 -  -2.8  -4.19735   GCGGTTAAAAGCAAA TCCTTACTCGGCAGTT-GCCGCACAC GGT ATTTAAGGCCAACAGCCGAATA-GGA AAGCCGCCGCCTTCG  60 72
LOY33_RS05330 1207308 .. 1207338 - -11.3  -3.17075   TTGGGTTGAAGTTAA      CTGCTACGTCCAGT CGAG ACTAGACGT-GCAG       CAACAATTGCTAGCG  69 35
LOY33_RS05315 1204169 .. 1204190 - -10.1  -3.21276   TTTCCCGGCAGAACA           TGCGCAAGC TCAT GCTGGCGCA            TCCGGGAAGCTTCCC  62 255
LOY33_RS05275 NONE
        xseA NONE
LOY33_RS05265 1194054 .. 1194074 -   -14  -4.90266   CCGACCAATCAAAAA            GACCGCGC CAGTT GCGCGGTC            TTTTTGATTGGCGCA 100 50
        leuA 1192060 .. 1192086 - -20.2  -5.98781   CACAACCAAAAAAAA         TGCCCGCCTCCG TAT CAGAGGCGGGCA         TTGCATGCAGCAGCG 100 54
LOY33_RS05255 1190822 .. 1190849 -  -3.4  -3.22777   TCGGACAGAGGAACA        CTGCTCATC-AGG CGG CCTTGGTCAGCAG        GGCGGCGAACTTGCG  45 5
LOY33_RS05250 NONE
LOY33_RS05245 1187608 .. 1187624 -  -2.9  -3.73775   TCCAGGCTGAGCAAA              GCTGGAA CGA CTCCACC              ACCCAGAAGCATACC  53 419
        hexR 1181870 .. 1181893 -  -3.8  -3.70149   TCGACAGCAGCGAAA          GCGACGAGGGT GTG ACCCTCA-CGT          GGCGCCTGCAACTGT  54 518
         gap 1169212 .. 1169237 -  -6.7  -4.30576   GCGGCAGGAGGAAAA         GCAGGCTTACC CCCC GGCTTGCCTGC          CGCCTGAAGCTTGCG  72 56
LOY33_RS05155 1168582 .. 1168601 -    -5  -2.75382   CATGTGAGGCAAGCA            GGCTCAAT CGCG ATTGAGAC             GATCGGCTACGCCTA  44 9
LOY33_RS05150 1167549 .. 1167570 -  -5.2  -5.41143   CATCGCGTAAAAAAA           GATTCCGA TTCAGT TCAGAATC            ACCAGCGCCGGGTAC  93 13
LOY33_RS05145 1164775 .. 1164795 -  -2.4  -2.85169   AAATAGTAAAAAAGG            TTGCGGGC CATTC GCCGGCAG            GCCAGCTCCCTGTGG  39 65
LOY33_RS05140 NONE
LOY33_RS05135 1163564 .. 1163574 -  -5.4  -3.29144   CGATGCTGTTGAGAA                 CATG ACT CATG                 GTTGGCCCTCCCGTT  51 60
LOY33_RS05130 1161706 .. 1161739 -  -6.7  -3.21099   GCTGTGGATGACCAA     CTGCATGATCCAGCTG TTC CTGCT-GATCACGCTG     TTCTCGGCGGGCACC  52 501
        arcD NONE
        arcA 1157482 .. 1157495 -  -5.2  -3.80625   CTTTTAGAACGCAAA               GGGC TGATCG GCCC                GGCCGGCGCCTTGTG  61 64
LOY33_RS05110 NONE
        arcC 1155429 .. 1155452 - -12.4  -3.60792   TCTGGAAGGTTGAAA          CGGGCGGACC TGCA GATCCGCCCA           ACTGCATCAACGGTA  77 32
LOY33_RS05100 1154941 .. 1154971 -  -5.2  -2.73364   CCGGGATGGCAAGTA       TGCCCTGCGACCGC TGC GCGGTCGAATCGCG       GGTCAAGCCCGCTCC  47 99
LOY33_RS05095 1153368 .. 1153384 -  -9.5   -3.6682   GGCGATGTAGCGAAA              TCGATAC GGT GTATCGA              ATTCGCTACGGAAGG  72 31
        gcvH NONE
        gcvP 1149881 .. 1149903 -    -4  -3.01712   CCTTGCCGGCGAAGA           GGCCCTCAGG CGT CCTGATAGCT           TTCGATCGACGGGCA  44 8
LOY33_RS05080 NONE
        gcvT 1147105 .. 1147137 -  -9.7  -4.62069   TTTCGATTGCAAAAA      CAAGTCCCGCAGAGC GCC GCACCACGGGGCCTG      GCGGGAAATTTCCGG  87 143
LOY33_RS05070 1146661 .. 1146684 - -18.2  -5.24129   TGCGCGCACAAAAAA          GCCCCTGCTG TTGC CAGCAGGGGC           TCTTTCGTTGATGAA 100 43
LOY33_RS05065 1146055 .. 1146072 - -12.7  -5.06414   CCTGGCCAACAAAAA             GCCGACC TCAG GGTCGGC              TTTTTCATTGGTTGC 100 69
LOY33_RS05050 NONE
LOY33_RS05045 NONE
LOY33_RS05040 NONE
LOY33_RS05035 1138089 .. 1138131 - -25.6  -5.28826   AAATCCCATAAAAAA CGCCGGCAAGACGGGCCCCC TGT AGGAGCCGGCCTTGCCGGCG ATGCAAGGCGCAGCC 100 111
        rlmF 1137057 .. 1137082 -  -9.6  -4.09511   AACAGCTTCTGAAAA         CCGCGTCCGG TGCGAG CCAGGCGCGG          TTTTTTTGTGGGTGC  78 52
        yejK 1134995 .. 1135015 -  -5.4  -4.11371   CAACAGGCGGCAAAA            GGCCTG CGCGCATTT CAGGCC            GGGCGTTGACGGGGT  66 349
LOY33_RS04945 1123208 .. 1123220 -  -3.3  -2.64616   CGTTCATTTACATCA                CTCCG GCG CGCAG                CAGGTCGTGCATGTT  40 5
LOY33_RS04940 NONE
        lptC NONE
        lptA NONE
        lptB 1120721 .. 1120735 -  -8.5  -2.65298   GCCATCTACTACAAG               GGCGC GAGAG GCGCC               AACTTTAAGCAAATT  57 147
LOY33_RS04920 1119125 .. 1119143 - -10.2  -3.21276   TGCCGGTGCATAAGA             GGCAGGTG TTG CGCCTGCC             ACTGAATTGCGGTGG  68 57
        raiA NONE
        ptsN NONE
        rapZ NONE
LOY33_RS04900 1117147 .. 1117168 - -14.5  -2.52464   GTTGTCCTGAAGCGA           GAAGGCGAG GTTA CTCGCCTTC            GTCGAAATAGTTGTT  78 14
LOY33_RS04865 1111186 .. 1111210 - -17.1  -3.80573   CGCATGAGCATGAAA          CCGGGCGGGCA GGG TGCCTGCCCGG          TGGCGAGAATCAGCG 100 35
        gatC NONE
        gatA NONE
        gatB NONE
LOY33_RS04805 1096134 .. 1096144 -  -2.4  -2.73159   TGAAGGTGGGTAAAG                 CGGC CAG GTCG                 AAAATGGTCGTGCTC  39 51
LOY33_RS04800 NONE
LOY33_RS04795 1094634 .. 1094660 - -13.7  -3.34947   GAAGAAGGGGCAGAA        GGCCGCC-GCCG TCGC CGGCTGACGGCC         CTGCGGGGTGATCGG  83 41
LOY33_RS04770 1089420 .. 1089436 -  -5.1  -2.74792   GCACGACCCTCAAAC              CATAGCT GAC AGCGATG              CAGGCGTTGCCCGCG  44 47
LOY33_RS04765 1087684 .. 1087697 -  -3.1  -3.64103   CAGGGACAGGCTAAA               CATCGC GTT GCG-TG               TCTATTGGCTGACGC  52 27
LOY33_RS04760 NONE
LOY33_RS04755 1084346 .. 1084399 - -15.3  -3.74693   CTGCATTCGATTAAA CCAGCGTAGC-CATCGCGGCCGATTC GGC GAATCGGCCGCGACCTGCCGCCCTAG AGGATGTTGAACGGA  95 22
LOY33_RS04750 1082683 .. 1082717 - -14.3  -2.54193   CATCAGCCTAAGGCA    TGCCTGCGAGCGCCCG GGGG CGGGCGCT-GCAAGCG     TTATCGTTCTACTTC  78 34
LOY33_RS04745 NONE
LOY33_RS04740 NONE
LOY33_RS04735 NONE
LOY33_RS04730 1078651 .. 1078663 -  -5.5  -3.76402   ATTGGAGGTAGGAAA                GCAGA ATA CCTGC                AGGGCCCTATCGCGG  58 117
LOY33_RS04725 NONE
LOY33_RS04720 NONE
LOY33_RS04715 NONE
LOY33_RS04710 NONE
LOY33_RS04705 1069780 .. 1069798 -  -2.3  -3.75105   GGAATTCAGCAACAA            GGCCGTGG AAAA CCT-GGCC             ATCGACGGTGGCGGT  51 191
LOY33_RS04695 NONE
LOY33_RS04690 NONE
LOY33_RS04685 NONE
LOY33_RS04680 1064204 .. 1064215 -  -5.8  -3.80573   GGCATGACCAGCAAA                GGTG CCTT CACC                 GGCGACTACATCACC  60 356
LOY33_RS04660 1058609 .. 1058630 - -15.9  -5.14563   GGGCCCATGAAAAAA           GGCGACGGT TGCA ACCGTCGCC            TTTCGTGTGCAACTG 100 49
LOY33_RS04635 1053977 .. 1054004 -   -17  -4.12532   GCCTTGATACACAAA        GGCCCCGATCAC CGAA GTGAACGGGGCC         GGGCCTGCCAGCTGC 100 43
LOY33_RS04630 1050881 .. 1050900 -    -7  -2.88231   AGCACAAGCATTACA            CCCCCGGC GAGC GCCAGGTG             CAGTTCGAGCTCAAG  50 491
        suhB 1031666 .. 1031681 - -10.4  -5.28778   ACCAGCCACAAAAAA              GCACCC CGAA GGGTGC               TTTTTTATTGCCCGG 100 48
LOY33_RS04515 1030316 .. 1030327 -  -3.6  -3.01712   CCTTGCCGGCGAAGA                GGCC CGAA AGCC                 ATGTCTAGTCCTGAA  44 76
LOY33_RS04480 1023941 .. 1023964 -   -14   -5.0916   TTCTGAATAGAAAAA          GGGGTAGAAA TTTC TTTCTACCCC           TTCTCTAAGCCCTTG 100 58
LOY33_RS04465 NONE
LOY33_RS04460 NONE
LOY33_RS04455 1018693 .. 1018723 - -14.1  -3.90744   TTTGTCTGGAAACAA       CTTCTGAGCTGCC TGTAT GGCAGCCCAGAAA       AATCACCGTGTCCTC 100 171
LOY33_RS04435 1015855 .. 1015886 -  -4.4  -2.79679   AAGAGCCGTACCACA     GTCGC-AGGCCCCG TTTTTG CTGGGCCTGGCG-C      GGTAGTGAGGTGGCA  44 165
        msuE NONE
        ssuD NONE
LOY33_RS04420 1012864 .. 1012877 -  -2.3  -3.04144   GCGGGAGCGTCAACA               GGTGC ATGG GCAGC                CCTCAGGAGTAGAAG  41 28
LOY33_RS04415 1011696 .. 1011727 -  -4.2  -3.71848   TCGTTGCAGGAAGAA      TGGGCCACCGCCCC GGCC GGGACGGCGTGCAA       CGCAAGGTGGGTGAG  54 68
        ssuD 1010278 .. 1010301 - -11.6  -2.79183   TCGACCTGCATTACA          CCGGGGCCCG TGGC CAGGCGCCGG           AGCTGAGCGCGATCA  62 255
LOY33_RS04370 1001991 .. 1002020 -  -2.7  -3.48395   AGGTCCTTCACATAA       CGGTG-GGCGCAGC CAG GCTGCGCGTCAAAG       GCGGGAAGGATGGCG  47 77
LOY33_RS04365 NONE
LOY33_RS04360 1000706 .. 1000722 -  -2.1   -3.2614   GACGTTGCAGACCAA              CCTCAAC AAC GTGGCGG              ACAAGCGTTACTACC  44 98
LOY33_RS04330  994024 ..  994056 -  -3.9  -2.78384   CTGGCCGCGATCACA      CTGATCGTGCTGGGC AAT GCCGGCCACGACCCG      TTGCAGTGGGTGGGC  43 264
LOY33_RS04315 NONE
LOY33_RS04310  991091 ..  991120 - -11.5  -2.78463   ACGCGCTCGATGACA       GGCGCGCGCCTT GCTGGCG AAGGC-CGCGCC       GCAACCCTCAGCGCA  66 33
LOY33_RS04295  988950 ..  988964 -    -7  -2.52543   ATTTCGTGCAACTCA               CCGCGC TGG GCGTGG               GGTACTACCTGTGGA  47 227
        norR NONE
LOY33_RS04200 NONE
LOY33_RS04195 NONE
LOY33_RS04190  952918 ..  952972 -  -9.9  -2.64472   CACCGGCGAAATCCA GCGCATGATCAGCGCCTTGCAGCGCGG CAC CCGCGATGC--GGTGCAGGCCATGCAC GAGAGCCGCGAGCAT  57 327
LOY33_RS04180 NONE
LOY33_RS04175 NONE
LOY33_RS04170 NONE
LOY33_RS04165  945039 ..  945059 -  -6.9  -2.52896   GGATTGGGCAATGCA            CTGTTGC ATTTCGG GCAACAG            TCGAGCGCAGCGTTT  50 120
LOY33_RS04160  944629 ..  944646 - -12.7  -5.78622   CCAGGCCAAAAAAAA             GCCGCTG ATAG CAGCGGC              TTTGAAAGACGGCCA 100 103
LOY33_RS04155  943153 ..  943173 - -11.9  -4.26076   CTATTTGCAGGAAAA            GAGCCTGCA TCC TGCAAGCTC            TTTCGCGCATGGCGG  93 46
LOY33_RS04150  941339 ..  941365 -  -6.5  -3.61398   GCGGTGCTGGAAGAA        GTGGAGCGCGGT GAAG ACCACGC-CCTC         AAAGCCTACAAGGAT  56 175
LOY33_RS04140  940360 ..  940387 -  -9.1  -2.70932   GTTCGCGGCCAAGGA        CCCGCTG-CGGG TGATC CCCGCCAGCGTG        GTCGGCGGCGCACTG  55 245
         cra NONE
LOY33_RS04115  932487 ..  932536 -  -6.2  -3.25823   CGCCGGGCAGACCAA CCTGCT-GGCGCTCAACGCCGCC ATCGA GGCGGCGCGGGCCGGGGAGCAGG GGCGTGGCTTCGCGG  53 486
        nadC  925631 ..  925644 -  -2.3   -3.9461   GCGCCTGAAGAACAA               CGACG GCAG CTTCG                ATGAAGTGAAGGTCG  56 395
        cysZ  923708 ..  923745 - -14.8  -3.38768   CGACATCATCGACAA   CAGCAAGCGCCAGGCC GAAGAG GGCCTGTCGCTGGCCG    GGCAGACCGGTACGG  80 169
LOY33_RS04050 NONE
         pta NONE
LOY33_RS04040  915365 ..  915407 -  -7.6  -3.14132   TCTTTTCGCCAGCAA TGCTGGCTCCTACAGGGG GCTCACG CCGTTGTAGGAGCCGGCC TTGCCGGCGAAGGGC  57 41
LOY33_RS03980  899156 ..  899184 -    -4  -4.56597   GCCCCTCTGCAAAAA       GTC-GC-GAATTCT AGC AGAACTCAGCTGAC       CACTCGGCGCGGGTT  70 17
LOY33_RS03975  897926 ..  897958 -  -8.3  -2.79501   GACACGGCTATGACA      CGTACAGCCTTCCCG CCC CGGGTAAGGTGTGCG      TGTCATAGGTCTTGT  54 202
LOY33_RS03970  897009 ..  897023 -  -7.8  -3.50422   AGCAACGAGAACGAA               GCCGAC CTG ATCGGC               CTGGAGCTGGCGGCG  60 302
LOY33_RS03960 NONE
LOY33_RS03940  891223 ..  891235 -  -4.7   -2.8934   TCGCAAAGTACGAGA                GAGCC GCT GGCGC                TTGGGTAGAATGCGC  46 446
LOY33_RS03930  890869 ..  890896 - -17.1  -4.99134   ACGGCAAACGAAAAA        GCCCGATGCCT CGTTGC AGGCATCGGGC         TTTTTAGTGGGCGTG 100 47
         mqo  887932 ..  887945 -  -9.5   -5.1675   GCAGCCATGAAAAAA               CGCCC CGAG GGGCG                TTTTTTCATGCATCA 100 44
         upp NONE
LOY33_RS03895  883904 ..  883922 -  -4.5  -3.21276   TGTTCGCGCAGAAGA             TGGGCCT GGCCG AGGGCCA             ATGGTCGGTGTCGTT  47 393
LOY33_RS03880 NONE
LOY33_RS03875 NONE
LOY33_RS03870 NONE
        phrB NONE
LOY33_RS03860  876955 ..  876976 - -15.9  -4.77036   CTGCACCACGAAAAA           GGCCCTGAC TTGC GTCAGGGCC            TTTTTTCATTTTGGC 100 31
LOY33_RS03825 NONE
        lolB  869046 ..  869059 -  -3.7  -2.52516   CGGCTCATCATCAAT               GCCCC AGCT GGCGC                GGTTGCCATTCCTTG  41 7
        ispE NONE
LOY33_RS03810  868086 ..  868096 -  -2.4  -2.52585   GAGTATAGGAAAATG                 GCAG GGG CGGC                 TGGATTCGAACCAAC  38 13
LOY33_RS03805  867026 ..  867058 - -22.8   -5.0538   GGGGAGGGCAAAAAA      GCCCCGCCCCAACA ACCAG TGCTGGGGCGGGGC      GCTTTACGTCAACGT 100 62
LOY33_RS03800 NONE
         pth NONE
        ychF  864506 ..  864542 - -12.4  -4.61231   CGACACCGGTAAAAA   CAAAACCCCCTGAGGCG TAAA CGC-TCAAGGGGTTTGG    TGTGCGTCGGGCGTC 100 61
LOY33_RS03785  862144 ..  862198 - -20.1  -3.81146   TTGGCGAACGAACAA GCC-TGGCAACGCCGATCCTGCAGGC CATG GCCTGCAGGATCGGCGTTGTATCAGC GTGTGCCCGCTACCG 100 21
LOY33_RS03775 NONE
LOY33_RS03770  857023 ..  857047 - -14.3  -2.71731   GGCATTGGGCAATCA          GCGCAAGCAAG GGG CTGGCTTGCGC          TGATGGGGGCTCAGA  80 36
LOY33_RS03765 NONE
LOY33_RS03760  855382 ..  855397 -  -4.6  -2.61383   AGTGGCATGCAGAAT              CCTTCG GGCG CGCAGG               GGTGAAAGGGTGTTC  43 88
LOY33_RS03755 NONE
LOY33_RS03740 NONE
LOY33_RS03735 NONE
LOY33_RS03730  847392 ..  847402 -  -4.6  -3.14745   TCCTGAGAAGAGACA                 GACG TTT CGCC                 TTTATCCCTACAGGC  47 84
LOY33_RS03725  844432 ..  844454 -  -9.1  -3.16564   GGTGTACGCCACCAA           CCACGCCTA TGCGG TGGGCGTGG           CAGCGCTGATGGTCA  59 484
LOY33_RS03710 NONE
LOY33_RS03705 NONE
LOY33_RS03700  838033 ..  838052 -  -2.8  -4.65895   CCGCTTAGCCAAAAA            CCCCT-CAG AAC CTGTAGGTG            AAGTTGGTCATCACG  69 10
LOY33_RS03695  837835 ..  837856 - -12.3   -5.1675   TCAGGCATGAAAAAA           GGGCCTACC TTTC GGTAAGCCC            TTTTTAGTACTTGGT 100 37
LOY33_RS03670 NONE
LOY33_RS03655  828383 ..  828412 -  -3.5  -4.07687   ACGGCCTGTGGAAAA       GCCTGAACACCACC ATC AGCGG-GTTCGAGC       AGCTGCCGCCGCAGT  61 152
LOY33_RS03645  827139 ..  827158 -  -4.8  -3.60792   CCGTCAAGCCCGAAA            GCCAGGGC CGTG GCCTGGGC             CTGCGCCTGCTCGAA  52 237
        mksB NONE
        mksE NONE
        mksF  821064 ..  821083 -  -9.2   -3.4811   TTGGGCAGAATAAGA            CCGCGTTG AATC CATCGCGG             GTCGAGCCCGCTCCC  67 111
LOY33_RS03590  816128 ..  816153 -  -8.9  -4.34402   CCGGCCAGAGGAAAA         GCAGGCCCATC GAGC GATGGGCCGGG          GCAGGGGATCAGTGC  81 34
LOY33_RS03585 NONE
LOY33_RS03580  814896 ..  814908 -  -6.2  -3.17075   CGCTGGCGAAGGCAA                GGCC TTCCT GGCC                GAGAACGCCAAGCGT  51 456
LOY33_RS03550  809718 ..  809747 - -19.3   -3.5525   ATAGAGGCGGGCAAA       CAAACCCGCCCCG TGGT CGGGGCGGGTGTG        CCGAGCTTAGGCCGG 100 32
LOY33_RS03545 NONE
LOY33_RS03540  807269 ..  807285 -  -4.3  -3.14132   CCTCCTTTGTAGGAA              GACCATG ATG CGCGGTC              ACCGGTTGCATCGAA  45 55
LOY33_RS03535  806279 ..  806301 -  -6.3  -3.65522   GATGGAGCTCAAGAA          CG-TCAAGCG CGGC CGCCTGAGCG           AGCTGGGCGGCGAGT  59 483
LOY33_RS03395 NONE
LOY33_RS03390  765214 ..  765232 -   -16  -5.26316   CGATGCCACAAAAAA             GCCCGGCT GGG AGCCGGGC             TTTTTCACATCAGGT 100 49
LOY33_RS03370  761110 ..  761136 -  -4.3  -3.02511   GTTATCGTTCCAACA        CGCAGCACCAGG CCCG CCAGG-GCTGGG         TCCGGTGGCATGAAC  45 111
LOY33_RS03365  759392 ..  759415 -   -16  -5.04597   AGGCACACACAAAAA          GGGCCGGTGC ACGT GCACCAGCCC           TTCCTCATCAACCGA 100 47
        mscL  740648 ..  740665 - -14.1  -3.49777   TGGTAGACAGCACAA             CGGCGCC CGAA GGCGCCG              TTACGGTCAGGCAGG  88 47
LOY33_RS03325 NONE
LOY33_RS03320  737423 ..  737439 -  -7.9  -4.87786   CGAACCGGAGAAAAA              GCCGCTG ATG CAGCGCC              TGGGCTGGCTGCTGC  86 265
LOY33_RS03300 NONE
LOY33_RS03290 NONE
        trmA  730196 ..  730227 -  -9.4  -3.31905   ACCCGCGATAGAACA      CCGCCGATCCGG-GC CTA GCGCCGAACCAGCAG      CACCCCGCTTTCCAT  66 8
LOY33_RS03275  727541 ..  727551 -  -3.2   -4.4078   CGTGTGCAACGAAAA                 CATG CAC CACG                 GCGAGTACGTCAAGC  66 379
LOY33_RS03260  723495 ..  723519 - -15.7   -3.4052   CCGCAAGGTAATGAA          CGCCGGCTCCC TGT AGGAGCCAGCG          TTGCTGGCGAAGGGC  89 58
LOY33_RS03245  719845 ..  719855 -  -2.4  -2.77899   GGCTTTCATGAAGGA                 GTCG GGT CGCC                 AGTCTAGCAGCAGCC  39 48
LOY33_RS03240  718860 ..  718871 -  -2.2  -3.65446   TAATCAAACAACGAA                CGCA CAAA TACG                 GCAGAAGCAGCCCAG  51 64
LOY33_RS03235  718225 ..  718250 - -16.1   -3.4277   ATCGAACAGCCACAA         CGCCGCGAGAC CTTG GTCGCGCGGCG          CTGCGAAGTGGATGG  85 114
LOY33_RS03220  715873 ..  715913 -  -9.9  -4.76123   AAACCATCAACAAAA TGT-TTAGGGTGTTTGCG CGAGGC CGCAAACACCCCATTACA  GGCGTCAGAGTCTGC  93 30
LOY33_RS03215  713671 ..  713695 -  -6.4  -3.53012   GTTCGGCGCTGGAAA         CCGCGTCTGAC CCGC GTG-GACGCGG          GGTGGGGCAGGTCGT  58 145
LOY33_RS03195  709421 ..  709437 -  -5.1  -3.05384   CTCTGGCCGATGCAA              CTGATGA TCT TCATCGG              TACCTTGCTGGGCAG  47 502
LOY33_RS03185 NONE
LOY33_RS03180 NONE
LOY33_RS03175  705720 ..  705732 -  -3.3  -3.18264   GTGCTCATTCAGCAA                CTCGC TGG GCCAG                GCTGACGCTGAAGAT  45 2
LOY33_RS03170 NONE
LOY33_RS03165 NONE
LOY33_RS03160  703314 ..  703330 -  -2.1  -2.59564   GGTCCATCTCAGAAT              TCCTTGG GGG CCAGGGC              CAGCAGGGCAAGGCG  38 2
LOY33_RS03155  702045 ..  702056 -  -7.2  -3.39327   TTCGGACACCTACAA                CCCG TGGC CGGG                 CATCGTCGAGACGGC  56 342
LOY33_RS03140  698740 ..  698753 -  -5.9  -4.18018   CGGCCGCACCGAAAA               CCGCC GCGT GGCGA                TCGTGGTCGCCTCCG  66 42
LOY33_RS03070  677264 ..  677282 -  -3.1  -4.58395   CTCATCGGCGAAAAA             GCCGATA AACCG CATCAGC             GGGTGGCCGCCAGGC  69 21
LOY33_RS03065 NONE
LOY33_RS03060  675592 ..  675602 -  -5.4  -2.62396   CAGGTGGGCAGAGGA                 TACG CAG CGTA                 GCATGGCCTGGAGGC  46 347
LOY33_RS03055 NONE
LOY33_RS03050  672915 ..  672943 -  -5.7  -4.31433   TACCCGCAGAAGAAA        CGCCGCGACCCGG TGG CAGGGACGCCGGG        CGGCCACAAGGCGCG  72 487
LOY33_RS03040  671063 ..  671091 -  -2.3  -3.14132   CTGGGTGCGCATGAA        CGGTGACTCGC GCGCCTT GCACGTCACCC        CCGCCGGGTTGCGTG  42 149
LOY33_RS03025  667940 ..  667960 -  -2.5  -2.71712   TGTGGTTGGGTAAAT           GCAGCAGC ATTGTA GC-GCCGC            GACCGGGCCCCGGCA  39 91
LOY33_RS03020  667459 ..  667479 -    -9  -2.70932   TGCTGCTGGGAATCA           GCGCGCTGC ATAC GCAG-GCGC            TGTGGCCGTTGCTGG  55 293
LOY33_RS03005  665587 ..  665605 -  -6.7  -3.27298   GGCGCCAAGCATCAA             CCTTACC CCATT GGCAAGG             TCAATAGCCCAGAGC  54 26
LOY33_RS03000 NONE
        cueR  662577 ..  662591 - -12.8  -3.55563   AGCTTACTCCGGAAA               GCCCGC TGA GCGGGC               AGTTCGCGGAGGACG  74 185
LOY33_RS02980  659505 ..  659539 -  -7.9  -3.20858   TACGAGATCCACGAA    GCCTTC-GC-CGCCCAG GTG CTGTGCACGCTGAAGGC    CTGGGAAGACGCCGA  54 253
LOY33_RS02970 NONE
LOY33_RS02965 NONE
LOY33_RS02960  655220 ..  655235 -    -6   -2.5789   GCAAACAGCATGAAG              GCCAGC ATGG GCAGGC               TCCTTGGTAGAGGGG  48 67
LOY33_RS02955  654613 ..  654628 -  -5.4  -3.28712   CGCCGGCTCCTACAA              GC-CCTG TGT CAGGTGC              ATGGGGCCTTACTGC  51 34
LOY33_RS02950 NONE
LOY33_RS02945 NONE
LOY33_RS02940 NONE
LOY33_RS02935  652175 ..  652205 - -16.2  -3.68988   GTGTAGTCAAGATAA       TGGCCAGTCGCC TTGAGGT GGCGACCGGCCA       TCGCCGGCTCAGTGG 100 34
LOY33_RS02930  649976 ..  649986 -  -6.8  -3.29144   GCAGGTGCGCGACAA                 TGCC GGC GGCA                 TCGACCCGCGGCTGC  54 198
LOY33_RS02915  646455 ..  646473 -  -4.5   -4.9218   CAGTGACTAGAAAAA             TAGACGC AGTTG GCGGCTA             TGTACAACGTATGTA  80 65
LOY33_RS02910  645545 ..  645603 -  -7.6  -3.12351   GGCTGGCATATCCAA TTTGTTTCAGGTTTCACCGCTGCCTTCGA AGGC TCGAAGGCAGCGGCGA--CCTGTT-CAAT GCGCCGTGATGCGCT  57 21
LOY33_RS02905 NONE
LOY33_RS02900  644116 ..  644133 - -12.7  -5.07486   CATGCCCAAGAAAAA             GCCCAGC GTCG GCTGGGC              TTCATTCACGATTTG 100 31
LOY33_RS02855 NONE
LOY33_RS02850  635663 ..  635696 -  -2.3  -3.28791   AGCCCGCTCCCACAA     GGT-ATGCGCACTACC TGT GGGAGCGGGCTTGACC     CGCGATGGCCGCGTG  44 52
LOY33_RS02830  628853 ..  628863 -  -6.8  -4.11216   CCTGGAGCTGGAAAA                 CCAG AAC CTGG                 CGCAAAGTGCCGCCA  67 384
LOY33_RS02820  622417 ..  622451 -  -9.2  -3.44206   GAACATCTACCAGAA     CCCCAACGGCAGCGTG TAC CACGCCGGCATCGAGA     CCCACGACACCATCG  63 278
LOY33_RS02795 NONE
LOY33_RS02790  614257 ..  614285 -  -3.7  -2.53715   TTGAGCAGGAGCAAT        CGAGTTGAACCCA TCG CGGGTCAAGCCCG        CTCCCACAGACAATG  41 103
LOY33_RS02785  612286 ..  612298 -  -3.3  -3.33744   TTGTCGGGCAAAAAC                GTAGC GCG GCGAC                TATGCCGCAAACTGC  47 155
        aroQ NONE
        accB NONE
        accC  609837 ..  609859 - -16.3  -6.10295   GCAACACAAAAAAAA           GACCCCGGC ACCAG GCCGGGGTC           TTTTTCACATCACAC 100 46
LOY33_RS02760 NONE
LOY33_RS02755 NONE
LOY33_RS02750 NONE
LOY33_RS02745 NONE
        prmA NONE
LOY33_RS02735  600804 ..  600824 -  -3.1  -4.61231   TTAGAGTTCGAAAAA            GGGTGGGCA TGA TACCCGCTC            TCGGTGACCGGATAA  69 170
        dusB NONE
         fis  599384 ..  599409 -  -6.1   -5.1675   GGAGTCAGCAAAAAA         GGCGAC-CTCAT CGA ATGGGAGCCGCC         TTTTCTGGTGTGGAT  89 47
        purH NONE
        purD  596294 ..  596308 -  -9.2  -3.19246   CCAAGCCGAAGGCAA               GGCCCC TTT GGAGCC               TTGCCGTGTCAGCTT  66 39
LOY33_RS02710 NONE
LOY33_RS02705  592560 ..  592578 -  -4.4  -3.31144   GCGCGACGTGGAGAA             GGCCATGC ACT GCAAGGTC             ACGCCCTGTTTCACC  49 263
        cbiE NONE
LOY33_RS02660 NONE
LOY33_RS02655 NONE
LOY33_RS02650 NONE
LOY33_RS02645 NONE
LOY33_RS02640  581402 ..  581421 -  -7.1  -3.02144   TGAGGGTGCGCAAGA            GCCTCGGC AGCAA GCCG-GGC            CCTGGGGCGCATGCA  54 49
LOY33_RS02635  579129 ..  579156 -  -3.9  -3.28791   ATCGCTTGTCCATAA        GGCCCGGGCGC GTCGGT GCGCCGGGTTC         GAGGCGGGTGTTTTT  47 171
LOY33_RS02630 NONE
LOY33_RS02625 NONE
LOY33_RS02620 NONE
LOY33_RS02615  574106 ..  574116 -  -2.4  -3.05384   TTCCCGGCCAGGCAA                 GGGC TCA GCGC                 CAGGCAGCAGTTCAG  41 37
        cycA  572041 ..  572070 - -12.1  -3.01791   ACTTTCGCTGCAACA       TCACCCCGGCCCA GTAC CAGGCCGCGGTGA        CCTCACCTGCGGCGG  67 483
        urtA NONE
        urtB NONE
        urtC NONE
        urtD NONE
        urtE NONE
LOY33_RS02575  565141 ..  565156 -  -5.4   -2.5806   AAACTGTCGGAGAAG              GCCGGGT TCA ACCCG-C              GAACTCAATGGAGTA  46 453
LOY33_RS02560 NONE
LOY33_RS02555 NONE
LOY33_RS02550 NONE
LOY33_RS02540 NONE
LOY33_RS02535  558181 ..  558200 -   -10  -4.44667   TGCCTGAAGAAGAAA            TGAGCCCC CGCT GAGGCTCA             GTCGCGTGCCGGCAG  88 23
LOY33_RS02520  555608 ..  555661 -  -8.5  -3.53012   TGGGCTGGCTGGAAA CCGGCTGGCGCGGGGCAGGCCTGCC CATC GACGTGCACGCCTCGCACCAGTCGC TGACGTTCGAGGGCG  62 377
        osmE NONE
LOY33_RS02505  553721 ..  553734 -  -2.3  -3.37245   GGACCTGAAGATCAA               CCCCG AGTC CAAGG                GCCTGCGCCTGTTCT  46 359
LOY33_RS02490  550708 ..  550732 -   -15  -3.17075   TCGCTGGCAAGCCAA          GGGCTCAGCG CAGAT CGCCGAGCCC          TTGCCAGTACTTGGC  85 5
LOY33_RS02485  549274 ..  549289 -  -6.8  -3.28712   CTTCGGGGGTGACAA              GGCG-CG CTA CGACGCC              ACCTATGCCGGTGCC  54 248
        pncB NONE
        nadE  539981 ..  539993 -  -4.8   -4.0274   GTGATCAGCAAAGAA                GCTG ACATG CAGC                CAATCGCCACCGACG  61 332
LOY33_RS02385 NONE
LOY33_RS02380  525719 ..  525732 -  -9.5  -5.64274   GCAGGCATAAAAAAA               CCCGC TTTC GCGGG                TTTCTCTAGAACATG 100 39
LOY33_RS02375  524514 ..  524528 -  -2.1  -2.78463   ACGGCTTCCATCAGA              GC-AGG CCGA CCTCGC               GCTCAAGTTCCAGGG  39 6
LOY33_RS02370  522786 ..  522809 -  -2.3  -2.64616   TGGTGATGCAGACCA          CGGCCAGCA GCAAGG TGCTGGATG           ACCTGGCGGCGCAGT  38 160
        queG  507283 ..  507325 - -12.8  -3.14132   CCTGTTCGCCAGCAA GGCTGGCTCCTACAGACGG TACCGG CC-TGTGTAGGAGCCGGCC TTGCCGGCGAAGGCC  76 52
        rsgA  504869 ..  504907 -  -4.4  -3.11988   GTTCATCGAACAAAC   GCCTGCGCCATGACCG TCAGTAG CTGTCCTGCGGCAGGC   TGGCAATGATCGAGC  47 3
LOY33_RS02280  503391 ..  503418 -   -17  -3.32844   GCCGGCAGCCGACAA        CGCCCGCATGGA GTGA TCCGTGCGGGCG         TTGTGCTGTGTGGGG  90 50
LOY33_RS02265 NONE
LOY33_RS02260 NONE
         asd  498077 ..  498094 - -12.7  -5.24129   GCCTGGCACAAAAAA             GCCCGCA TCGC TGCGGGC              TTTTTGTTGGGTCAG 100 37
LOY33_RS02245  495044 ..  495061 - -12.7  -5.24531   ACCGGCCACAAAAAA             GCCCGCA TCGA TGCGGGC              TTTTTTGTGGCCGGT 100 63
LOY33_RS02240  493455 ..  493465 -  -3.2  -2.57344   CAGGTGCGTGACAAC                 CGCA TCG TGCA                 TTTCGAGCAGCCCCA  39 316
LOY33_RS02190 NONE
LOY33_RS02175 NONE
LOY33_RS02160 NONE
LOY33_RS02155 NONE
LOY33_RS02150 NONE
LOY33_RS02145  472573 ..  472589 -  -2.1  -3.63744   GGCTGGTGGAAAACA              GCTCGAC CAC GGCGATC              GTGGAGAAAATCCGC  51 86
LOY33_RS02130  468178 ..  468199 -  -2.1  -3.05844   GGGTCGACTTCAAGA           CCGCCAAGA CCCT TCAGGACGG            CCTGCCTATCCAGCA  41 339
        putA  453337 ..  453395 -  -9.7  -3.01966   TCCGCAAAAAAAATC GCGGGCCAGGCCGTCCCCCACAAGAATC TGCATC GATCCT-GTGGGGGCGGGCCTGAC-C-C GCGATTGGCAACGCC  64 48
LOY33_RS02075  451380 ..  451410 -  -6.7  -2.51888   GGTGAAATCGAACAT       GCGCGAACCTCCG GGTGA CGGTGGTTCCCCC       TCAGAACCACTCCTC  48 26
LOY33_RS02070 NONE
LOY33_RS02065 NONE
        mdtD NONE
        dbpA  445621 ..  445631 -  -2.4  -3.91144   CTGATAGGCGATAAA                 CGAC TCA GACG                 ATGCGAACCCGCAGC  53 19
LOY33_RS02050  444331 ..  444346 -  -4.6  -3.27994   CGAAGGTTAGACGAA              CTGCGC GGCC GCGTAG               GCCGATGCCCAGGCC  49 1
        yccS  441956 ..  441993 -  -7.7  -3.28712   GGCCGGCTTCGACAA   GGCCATCGCCGCCAT-GA AGG CCGATGGCAGCTATGCCC   GGTTGCTCAAGGACT  56 52
LOY33_RS02035  440466 ..  440518 - -12.8  -2.61264   GGCGCGATCGACAAG CAGTGGATCACCCAGCATCTGCGCAG TAT CCGC-CAGGTGCTGGGCTACCC-CTG AAGCCCCTCCGCCGG  71 94
LOY33_RS01985 NONE
        metK  428560 ..  428585 - -20.5  -5.10461   CCTAGGCAAGAAAAA         GCCCCTGCCAG TCGC CTGGCAGGGGC          TCTTGTTTACCGGGT 100 62
        ligB NONE
LOY33_RS01970  425978 ..  425996 -    -3  -3.05521   AGCAGATGCTCAAGA             CCAGCGAA GAC CTCGGCGG             CATGCTGCGTGGCCG  42 431
LOY33_RS01960  424169 ..  424180 -  -2.2  -3.65046   CTCTGACCCCAACAA                CAAG GACC CCTG                 CCATGACCGTCGCTT  51 416
LOY33_RS01945  421680 ..  421701 -  -2.1  -2.57795   TGGATGAGCAACTGA           TCACGCCGC AGTT GCTGTGCGA            GCTGGATGCGCTGGA  38 244
LOY33_RS01935 NONE
LOY33_RS01930  419040 ..  419052 -  -4.8  -3.58343   TCCATCACCCTCAAA                TGCG AAGTG CGCA                ACAAGATCACCCGCA  53 181
        ahcY  417033 ..  417061 - -24.7  -5.36441   TGGCCACAGAAAAAA        GCCGGTGACGCTG TGG CAGCGTCACCGGC        TTTGGCCCATCAGTA 100 35
        metF  416087 ..  416110 - -10.2  -5.24129   GGCGTCGACAAAAAA          GGGCCTTGGC GTGT GCCAGAGCCC           TTGTCGTCGGTGCAG 100 44
LOY33_RS01910 NONE
LOY33_RS01905  413041 ..  413072 - -18.8  -3.53012   TGCCTGGCCTGTAAA      CAAGAACGCCGCCC CTAG GGGCGGCGTTTTTG       TGTGCGCAGTGGCGG 100 43
LOY33_RS01885  408185 ..  408208 -  -2.3  -3.14132   TTCTGCTCTGAGTAA          GATGGAGGC AGTTCG GGCGCCATC           GCGGGTCAAGCCTGC  41 95
LOY33_RS01880  407117 ..  407131 -    -7  -3.29471   GCTGCAGGAGATCAA               GCCGCG CTC CGAGGC               GCGCGTGCTGTCCAT  54 342
        gshB  396245 ..  396274 -  -3.4  -3.35438   CATGATACCCCACAA       CGCGGGCCCGCCA CTTGT CGGCGGTCA-GCG       TGCCTTGAGCTTGCG  47 20
LOY33_RS01835  394838 ..  394850 -  -4.7  -2.63631   GTAACGCTTACAGGA                CGCGG TGA CCCCG                AACGCGCTTATCTGG  43 439
LOY33_RS01830 NONE
        ruvX  393435 ..  393460 - -10.3  -3.01712   GCTTGCTCCTCAAGA         GGCCGGGGCAG AGAG CTGGCCCGGCG          TGTAACCGATGGTCG  64 44
        pyrR NONE
LOY33_RS01815 NONE
LOY33_RS01810  390502 ..  390514 -  -5.5  -3.08522   CAGCGAGGCGAAAAT                GCCTG ATG CAGAC                TCATATGGGGGTGGG  49 127
        hslV  389905 ..  389925 -   -14  -4.09685   GTTCAGCGTGGAAAA            GCCCGACC GTCGG GGTCGGGC            GCCAGAACAGCTGAA  95 41
        hslU  388460 ..  388503 - -12.5  -2.53911   TCAAGCTGCAAGCTA CAAGCTGCAGG-AGAAGGCG TCCAG CACCTCCGGCCTGCAGCTCG CCGCTTGGCGCTTGC  71 48
LOY33_RS01795  387960 ..  387990 - -10.3  -3.06183   CCGACTTTCATGGAA       TGCGCAAGCCGGC CAATC GCTGGCCGGCGCA       CGGGCATTCAAGCAA  66 82
        phaC NONE
        phaZ NONE
        phaC NONE
LOY33_RS01775  382554 ..  382575 - -14.4  -4.53303   TAGCTGTACAGAAAA           CGCCCGGC CTGTGT GCCGGGCG            TTTTTATGTGGGGTG 100 129
        ubiE NONE
LOY33_RS01750 NONE
        ubiB  377662 ..  377684 -  -4.7   -3.6692   TTCGACTCCAAAATA           GGCCACGGT CCCGC ACCGATGCC           ACCTGCTAGTGTGCC  56 59
        hisI NONE
LOY33_RS01735 NONE
LOY33_RS01730 NONE
        tatB NONE
        tatC NONE
LOY33_RS01715  374669 ..  374695 -  -3.4  -3.73072   AAGGTGTGTATGAAA         GGCGTCGCCGGC AAG GCCGGCTCCTAC         GCACAGCAGCGGACG  52 46
LOY33_RS01710  372636 ..  372654 -  -6.7  -3.18383   ACCGGCAGCGATCAA            CGCCGCTG CCGG CAG-GGCG             GGGGGTTACAGGCTG  54 31
LOY33_RS01705  370539 ..  370559 -  -2.5  -4.25848   AATGCTGTAGGAAAA            TTCCCATCT TGC AGGCGGAAA            ATTCCACCTAGAGCT  62 33
LOY33_RS01700  368435 ..  368477 - -22.2  -3.14132   GGCCTTCGCCAGCAA GGCTGGCTCCTGCAGG GTTTCGCCGTA CCTGCAGGAGCCAGCC GTGCTGGCGAAGAGG 100 44
LOY33_RS01625  349506 ..  349525 -  -7.9  -2.83271   GTACGTGGACAAGGA            CTACCAG ACGGCA CTGGTAG             GCAACCCGGACCGCA  52 275
LOY33_RS01610  346449 ..  346479 -  -4.7  -2.80252   ACTGGCAGAACATCA      GCATCGAGC-GCTA TCAG TTGCTGCTGGATGC       GCAGCCGGACAGTGA  43 281
LOY33_RS01590  341706 ..  341731 - -17.5  -4.41494   CAGGCTGAATGAAAA         CGCCCCCGGTC GAAA GGCCGGGGGCG          TTTTTGTTTGTGCAA 100 135
        glnA  336487 ..  336506 - -11.4  -5.78622   TCAGCGCAAAAAAAA            GGCCTCCC GAAT GGGAGACC             TCTCTCGTTACGCCG 100 61
        glnL  335079 ..  335089 -  -3.2  -3.14132   GCTTCGGCTCATGAA                 GAAG TGG CTCC                 TTGTTCCAGCGGCAG  43 8
        ntrC  333372 ..  333382 -  -8.2  -3.97413   TGCACGAATAAAAGA                 GGGG ATT CCCC                 GGCCTGCCTGTACCA  71 282
LOY33_RS01555  332448 ..  332463 - -11.8  -3.57144   TGCGGTACGTTGAAA              GCGCCC TTCG GGGCGC               TTTTTTCATGCCTCA  77 38
        gpmI  329421 ..  329446 -  -6.8  -3.03124   CTGCACGCCGCAAGA         GGCG-CAGCGC ACGTG GCGCTGGCTCC         TGCAGCTTGAACCGT  54 60
LOY33_RS01530  328010 ..  328031 -  -2.9  -2.89569   GCGTGAAATGAACGA           TGTGCCC CTATCCCT GGGCACG            GCACCATTGTGTCGG  42 11
LOY33_RS01525  326603 ..  326629 -    -5  -3.00923   GGCGAACAGCAGATA         GCGCATCACTTG CCG CTGGTGATGCTC         AGGCCCTTGAGCAGG  46 4
LOY33_RS01520  325744 ..  325758 -  -3.5   -4.1964   TCGAAGAGGCGAAAA               CCACC GGCAA GATGG               GCGTGATCTGGCGCG  65 102
LOY33_RS01475 NONE
        mutY NONE
LOY33_RS01465  311415 ..  311429 -  -2.1  -2.73969   ATTTATTAAATTAAT               TCCGT CGCTT ACGAA               TTTCCGGGGTTATTC  39 35
LOY33_RS01460  311233 ..  311257 -  -9.4   -5.4833   GCAGGCAATAAAAAA         CCCCAAG-GAA TCAC TTCGCTTGGGG          CTTTTCGGTATTAGT 100 40
LOY33_RS01455 NONE
LOY33_RS01450  310103 ..  310116 -  -3.7  -5.14563   GCCGTGATGAAAAAA               GGCGC GATG GTGCC                AGTTTTGGCCGATGC  81 120
LOY33_RS01445 NONE
LOY33_RS01440 NONE
LOY33_RS01435 NONE
LOY33_RS01430 NONE
LOY33_RS01425  305638 ..  305655 -  -3.3  -3.86909   AGGTGAACAAAAAAT             GACCAGC TGTC GCCAGCC              CTTGTCGGGCGGCTT  55 93
LOY33_RS01410 NONE
LOY33_RS01405 NONE
LOY33_RS01400 NONE
LOY33_RS01395 NONE
LOY33_RS01390  302590 ..  302619 - -18.7  -4.20148   ACCACCCCAAAACAA       CAAAGCCCTCGCA TTTC TGCGAGGGCTTCG        TCTTATATGGTGCCG 100 33
LOY33_RS01385  301456 ..  301468 -  -2.6  -3.19463   GTTATCAGGGATCAA                GGCC CCTGC GACC                TGTGGGGAATGTCCT  44 487
LOY33_RS01380 NONE
LOY33_RS01375  300051 ..  300062 -    -3  -2.60079   CTAGGCCACAACCCA                GTTT GAAC AAAC                 CGTTGACGTAGGCGG  40 51
LOY33_RS01370 NONE
LOY33_RS01365  294209 ..  294243 - -18.1  -3.25282   ACTAAGTACGATTAA    CACGAAAGAACCCGCC AAAA GGCGGGTT-TTTCGTG     GTTTCAGAAACAATG 100 283
LOY33_RS01360 NONE
LOY33_RS01355  293064 ..  293106 - -10.4  -3.14931   GCCATTCGCCAGCAA GGCTGGCTCCTACCGACGGC GTG GTCCTTTGTAGGAGCCGGCC TCGCCGGCGAAGAGG  66 273
LOY33_RS01345  291500 ..  291519 -  -6.3  -3.01712   TTGTTCGGGCGAATA            CCCGGCG TGGGTG CGCCTGG             GTATTCGTTTCATGT  51 40
LOY33_RS01330 NONE
LOY33_RS01325  288371 ..  288382 -  -2.2  -4.10795   TGAAAAAAATGCAAA                GGCT CCCC AACC                 CCGAGCGGCAAAAGC  59 354
LOY33_RS01320  286611 ..  286630 -   -10  -2.82516   TCGTCGATCAGCACA            CCCGG-CAG CCA CTGGCCGGG            GTGAGCATTCTTGAT  59 347
LOY33_RS01310 NONE
LOY33_RS01305  283798 ..  283825 -  -7.7  -3.33696   CTGGCGGCCAACGAA        GCGCCTACCGGC TACAC GCCG-CAGGCAC        TGCTGCTGTTCAGCC  56 210
LOY33_RS01290 NONE
LOY33_RS01285  278746 ..  278769 - -18.2  -3.57462   GATTCGACCTTCAAA          CAACCCCGGC CTAG GCCGGGGTTG           TTTGTTTTCGGCGTA 100 12
LOY33_RS01275  274831 ..  274856 - -16.1  -3.66178   CCGCTGAACTGGAAA         GGGCGCCACCG ATTG CGGTGGTGCCC          TTTTTTGTGGAGGCT 100 134
LOY33_RS01250 NONE
LOY33_RS01245 NONE
LOY33_RS01240 NONE
LOY33_RS01235  266038 ..  266054 -  -3.5  -3.08679   CCCGCGTAGTTAATA              GTGGCTG ATC CTGCCGC              CGATCTGCGCGCCGA  43 3
        rfbB NONE
        rfbA NONE
        rfbC  263422 ..  263432 -  -2.4  -3.05963   ATTTTCATGGGAACA                 GGTC GGC GTCC                 TTGAGCAACTGGCCG  41 4
        rfbD NONE
LOY33_RS01210 NONE
LOY33_RS01205 NONE
LOY33_RS01200  258337 ..  258371 - -10.7  -3.13403   CGCCTGGCACGAAGA    CCCGCACGC-G-CCGGC AGC GCCGATCAGCGTGCGTG    CGGCGCCGCCTGCCG  64 388
        yrfG  256501 ..  256515 -  -6.4  -3.22475   GCCATCCCGACAAGA               TCTACC CGG GGCAGA               CGCTGCGTATTCCGG  54 129
LOY33_RS01175  255114 ..  255128 -  -4.9  -2.91912   CGATGCATTGATAGA               GCGCG TCGAT CACGC               CGGGTCGAGCGACAG  46 20
        fdhD NONE
LOY33_RS01165  251716 ..  251739 - -18.2  -3.14931   CTTACTTGGGACGAA          GGCCCTGGCA GTGA TGCCAGGGCC           TTTTTCTTGCCTGCA 100 145
LOY33_RS01160  251034 ..  251070 -   -15  -3.28712   CGTTTGCGGGTACAA    CTGCGGCGCTGCCGGC GCGGG GCCGGCAGCGTCGATG    GAATTCAGCGGTGAC  87 30
LOY33_RS01155 NONE
LOY33_RS01150 NONE
LOY33_RS01145 NONE
LOY33_RS01140 NONE
LOY33_RS01135 NONE
LOY33_RS01130 NONE
LOY33_RS01125 NONE
LOY33_RS01120  242867 ..  242882 -  -3.2  -2.73441   GAGTATTCGGCAAAG              CATAGG TAGG CCTGTG               TCGCAAGGTAAGGGG  41 52
LOY33_RS01115  242203 ..  242213 -  -2.4  -3.60792   CCTGCAAGGCTGAAA                 CCCG GCG CGGT                 CAGTCGTTGATGCGG  47 25
LOY33_RS01105 NONE
LOY33_RS01100  240953 ..  240970 - -14.1  -4.85599   GCCAGCTGAGAAAAA             GCCGCCC GAAT GGGCGGC              TTTTTCGTTTGGGCT 100 46
LOY33_RS01085  237274 ..  237313 -  -9.4  -2.90941   AGGAGACCGCACAGA GCCT-G-GCA-CGCCGCGA GCAGG CCGCGGCGCTGCGCAAGGC CGGCGCCCTTGGGGT  56 107
LOY33_RS01075  236413 ..  236423 -  -2.4  -3.06183   GCGATCTTCATGCAA                 CACC TGT GGAG                 GGGGTAATGGTGGCC  41 7
        rimK  235163 ..  235197 -  -2.1  -3.61398   GCGCCTGCTCAACAA    CCTGATCGGC--AATGC GCT GCATCACGCCGGGCAGG    GCGTGGAAGTGGCGG  48 331
LOY33_RS01055 NONE
LOY33_RS01050  230291 ..  230306 -    -6  -3.32022   GGGTGGACAGAGGAA              CTGGCG TGGT CGCCTG               GTTTTCGCAGGGTTC  54 90
        gshA NONE
LOY33_RS01040  227931 ..  227951 -  -2.3  -2.60776   AAGCTCTGAAAAAGC            TTCGCCGGC AAG GCCGGCTCC            TACAGGTTTACAGCG  38 77
        tauA NONE
        tauB NONE
        tauC NONE
        tauD  216525 ..  216545 -  -7.5  -3.66018   GCAGGAGTTGAAGAA            CCGGCGC TACTACC GCGCCGA            GGTGCACCTGAGCGA  63 297
LOY33_RS00965 NONE
        tcyJ NONE
        tcyL NONE
        yecC  209932 ..  209965 -  -2.4  -3.06796   CGGCAGGTGAGTCAA    GGTGCCCGA-TGGCCG TGAC CGGGCAGTCGG-CAGC     GCTTCAGAGCGGTCC  41 107
LOY33_RS00945  209132 ..  209142 -    -4  -4.71307   TAAAAATTAAATAAA                 CTAA CCT TTAG                 GAATATGCATAGAAG  70 22
LOY33_RS00940  207727 ..  207739 -  -4.8  -3.20382   GGTCAGATCCAGGAA                TGCC GGGCA GGCA                GGGTCGCGTTGAGGT  49 0
LOY33_RS00935 NONE
LOY33_RS00930 NONE
LOY33_RS00925 NONE
LOY33_RS00920 NONE
LOY33_RS00915  202385 ..  202407 -  -4.1  -2.70932   GTTGCCGGCGAAGCA          GCC-GACGCT GTCC AACGCCTGGC           CGTTTCATCCTGGCT  43 167
LOY33_RS00910  201430 ..  201440 -  -6.8  -2.71712   CCTTGCCGGCGAAAG                 CCGT TGC ACGG                 TTCAAAGCCAGATGG  51 27
LOY33_RS00825  183148 ..  183194 -  -2.3  -3.02511   CGCATTTGCCGAATA CCTTCGATGCGCCCGGCGCAAC ACCTCA GATG-GCCAGGCGC-TCCA-GG TTGCACAGGTCCTGG  41 4
LOY33_RS00820  181193 ..  181205 - -10.5  -2.87881   GAAGTGCGTGACATA                CGCCC GTT GGGCG                CGACCACGCGGGTGA  59 294
LOY33_RS00785  173819 ..  173862 -    -8   -2.6027   TGAAAATCGAAGGGA GAGTTCCTCAGGCGCGCCCCA GGA CGGGGCGCGCC-GATCAACGG CGTCAGGCCAGGGCA  53 28
LOY33_RS00780  172570 ..  172580 -  -4.6  -3.25942   ACTGGCCGAGAGCAA                 GACG GCG CGCC                 TGCTGAGGGTGGGGT  49 170
LOY33_RS00760  168010 ..  168031 - -11.5  -5.14563   GCGCCCATGAAAAAA           GGCCCGGGT TTTC ACCTGGGCC            TTTTGTCGTAGATGG 100 38
LOY33_RS00715  149592 ..  149602 -  -2.4  -2.57132   TCGGCGGTGGATAAG                 CGGC GAT GCCT                 ATCCCCTAAGAATCG  38 96
LOY33_RS00710  149006 ..  149031 -  -5.9  -2.79183   GCGACTCGCAGCAGA         GTGCCGGGCGC GGCA GCGCCGTGCTC          AACCGCGATCTCGAA  47 122
LOY33_RS00645  137467 ..  137484 -  -4.1  -2.58861   CAGGAGCCGCACAAG             CGCCT GTTCATCG AGGCG              ATCCAGCGCGCAGCG  40 246
LOY33_RS00630  134067 ..  134091 -  -4.1  -2.73542   CGCAATTTGCAACCA          CTGACCGACCC GGC GGCGCGTTCAG          CCCTGCGGCTGGCTG  43 22
LOY33_RS00625 NONE
LOY33_RS00620  132518 ..  132534 -  -2.2  -2.52946   CGTGCCGACAAAACC              CGCCAA AAAAA TCAGCG              CATCACGCCTGGCGT  38 28
LOY33_RS00615  129892 ..  129917 - -16.9  -3.91144   GCCAGATGCGACAAA         GCCAGCGCCTG GAAT CAGGCACTGGC          TTTGCGGCTCACGGG 100 48
LOY33_RS00610  128548 ..  128572 - -20.1  -3.36968   GATTCAATTCCAGAA          CCCCTGTCTGC GTT GCAGACAGGGG          TTTTGTCTTTTCAGG 100 128
LOY33_RS00565  118916 ..  118951 - -10.4   -4.1673   GAATGTCGCAATAAA    CGGCC-TGAAGCCCGCG AAC CGTGGGCTTCAGGGACA    TTACGCAAAATTTGA  82 199
LOY33_RS00560 NONE
LOY33_RS00555 NONE
LOY33_RS00550  115776 ..  115800 - -13.6  -4.72272   GGCGGGCATTAAAAA         GCCCCAGC-CG GTAC CGCGCTGGGGC          TATTTGTCACAGCCT 100 51
LOY33_RS00545  113918 ..  113932 -  -2.1  -2.94726   GTCCATAACAGTAGA               TACAG TTCAC CTGCA               TTGTGATGGGCCAGT  40 247
LOY33_RS00540  113551 ..  113575 - -12.2  -5.63517   CTTTCAAACAAAAAA         CCCGTCAGCAG TCAC CTGC-GACGGG          TTTTTGAATTCGGGG 100 69
LOY33_RS00535 NONE
LOY33_RS00530 NONE
LOY33_RS00525  112320 ..  112331 -  -5.8  -2.65815   TTCACAGCGACAGGA                TGGC TTCG GCCA                 GCACCTGGTCGCTGG  46 0
LOY33_RS00520  110259 ..  110281 -  -6.1  -2.71924   GAGGTTCTGCGAAAT           GTCCCGGCG CCTTT CGGCGGGGC           GCAATGGCAGCCAAA  49 98
LOY33_RS00515 NONE
LOY33_RS00510 NONE
LOY33_RS00505  106796 ..  106816 - -16.9  -3.30701   GTGGATCAAATTGAA            GCGTCAGGC CAG GCCTGACGC            GGGCAGTGCAGGCCG  90 44
LOY33_RS00500 NONE
LOY33_RS00495  101546 ..  101558 -  -3.4  -3.54051   ACAAAGGCGACAGAA                GGTT TCATC AACC                AGTGCGGGTCTGCAG  49 460
LOY33_RS00485   99871 ..   99894 -    -3   -5.0538   CGTCAGGGTAAAAAA          GGCAACCCAG ATTT CCGGGTTGGT           CAGCCATTCCATGTG  78 113
LOY33_RS00470 NONE
LOY33_RS00465   94697 ..   94713 -  -4.3  -2.85351   CCGGGTCAGAGCATA              GCGTCAC TTG GCGACGG              ATGCTTGACCGTCAT  43 12
LOY33_RS00460 NONE
LOY33_RS00455 NONE
LOY33_RS00450 NONE
LOY33_RS00445   90739 ..   90751 -  -7.7  -3.72576   TGCCGGTGTACGAAA                CCTTC GTC GAAGG                TGCCAAGGAAGGGTT  63 437
        algB NONE
LOY33_RS00405   81953 ..   81969 -  -3.6  -3.28712   GGTGGCGCGGGACAA              CCTGCA GGCCT TGCGGG              CGGTGGGGCACCAGG  47 424
        yihA   74237 ..   74274 -  -7.8  -4.72272   GGTGCCTACCAAAAA   CAGAAATTTGCTGCGGC ATAAG GTCGCGGC-AATTTCTG   CTTTTTCGGCCTATG  87 251
LOY33_RS00360   71014 ..   71027 -  -2.3  -3.36256   GACATGGTCAAAAAC               TGCTC ATTC GGGCA                CTTCCCGCAGGAAGT  46 66
LOY33_RS00355   69648 ..   69667 -  -4.3  -3.14132   TTTGTCTTCCATGAA            GCCTTCGA TTACT TCGA-GGC            GGCCTACGGGCTCAA  47 411
         zur NONE
        znuC NONE
        znuB   66882 ..   66919 -   -12   -4.2558   TAGCGGCGATTAAAA   TGTCGCAGGGCGCGACC CTGTC GGCCGCACCCTGCC-CA   TGGGGCTGCGCGCTC  93 39
LOY33_RS00330   66024 ..   66047 - -19.6  -4.65895   CGGCGTAGTCAAAAA          GGCCGGCTCC TGCA GGAGCCGGCC           TTGCCGGCGAAGAAG 100 53
LOY33_RS00320 NONE
LOY33_RS00315 NONE
LOY33_RS00310   60964 ..   60974 -  -6.8  -3.61398   GGCGCCGTTCAACAA                 CCAG AAG CTGG                 TGGCGCAGTTGCCGG  58 180
LOY33_RS00280   56505 ..   56521 -  -6.5  -2.70932   TGCCCTGCGCAAGGA              TCACCGC GGC GCGCTGA              AATTCTGGCTGGCGC  47 346
LOY33_RS00255   51589 ..   51629 -   -12   -3.1505   ACGATTCGCCAGCAA GGCTGGCTCCTACACGG GGTGTAAT CC-TGTAGGAGCCAGCA  TTGCTGGCGAAGGCT  73 56
LOY33_RS00220 NONE
LOY33_RS00215   41993 ..   42016 -   -11  -4.07885   CATTGCCGGCGAAAA          GGCCTTCAGG ACCG CATGAAGGCC           CGATGCAGCTCGCCC  85 7
LOY33_RS00205   40346 ..   40359 -  -3.1  -3.28712   GCTGGCGGGCTACAA               GCTAC AAGC ATAGC                GCCATTAGTCTGTTC  45 39
LOY33_RS00200   39628 ..   39657 -  -5.7  -3.53012   CTTCTTGTGGTCAAA       TGGCTGTCGGCAGA TGG TCTGCCGCCA-CAA       GGAGCTGTTCTGATG  55 275
LOY33_RS00185   37920 ..   37945 - -19.1  -3.14132   GTCTTTCGCCAGCAA         GGCTGGCTCCT ACGT AGGAGCCAGCC          TTGCTGGCAAAAGGG 100 44
LOY33_RS00170   36524 ..   36544 -    -6  -2.58714   TGGCACAGGAATGCA            TCGGGCCG GTGCT CAGCCCGC            ACTTTCCAGGGTTCG  46 402
        trpB NONE
        trpA   33475 ..   33487 -  -3.3  -3.97368   CGTGCAACGGATAAA                GGGGT ATC ACGCC                CATGTGTATTACGAC  58 428
LOY33_RS00145 NONE
LOY33_RS00140   30799 ..   30814 -  -5.4   -4.4009   CCGTACGGTAGAAAA              GGCCGAG CAG CT-GGCC              CGCGAGTTCGACGAC  72 440
LOY33_RS00125   27843 ..   27863 -  -3.3  -3.01712   GGCCGGGGCCCAATA           CCTGGCTG GTGCCG CA-CCAGG            GCATGTTGCCGGAAT  42 382
         def   25692 ..   25709 - -11.3  -5.61881   GCTTAAAAAGAAAAA             GGCTTGC CGGA GCAAGCC              TTCTGGAATGAGGAA 100 41
         fmt NONE
        rsmB NONE
        trkA NONE
LOY33_RS00090   21333 ..   21375 -   -17  -3.14132   GTTCTTTGCCACCAA GGCACTGACCAGCAAGTTCG TGC CGAACATGCTGGCCGGTGGC AAGGCGGTGGGGGTG  84 358
        glyQ NONE
        glyS NONE
        gmhB NONE
LOY33_RS00060   15546 ..   15561 -  -8.2  -5.66684   TAATCCACAAAAAAA              CCGGCC TAAA AGCCGG               TTTTTTTATCGCGCG 100 162
LOY33_RS00045   10879 ..   10896 -  -3.3   -4.3467   ACCTTGAGATGAAAA             GCATCGT CGCC ACGTCGC              TGGCGGTGATCGCCC  66 257
LOY33_RS00025    6266 ..    6287 - -15.9  -3.54638   ACAACGCCCTCGAAA           GGCCAACCC TCAG GGGTTGGCC            TTTTTGTTTTCCCGC  90 282
