locus-tag class description C4J93_RS00005 PF00308 Bacterial dnaA protein C4J93_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix C4J93_RS00005 PF11638 DnaA N-terminal domain C4J93_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C4J93_RS00010 PF02767 DNA polymerase III beta subunit, central domain C4J93_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C4J93_RS00015 PF02463 RecF/RecN/SMC N terminal domain C4J93_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus C4J93_RS00020 PF18053 DNA gyrase B subunit insert domain C4J93_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS00020 PF01751 Toprim domain C4J93_RS00020 PF00204 DNA gyrase B C4J93_RS00025 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS00025 PF00072 Response regulator receiver domain C4J93_RS00030 PF00989 PAS fold C4J93_RS00030 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS00030 PF18698 Histidine kinase sensor domain C4J93_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS00030 PF00672 HAMP domain C4J93_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit C4J93_RS00045 PF05746 DALR anticodon binding domain C4J93_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit C4J93_RS00055 PF03352 Methyladenine glycosylase C4J93_RS00070 PF02254 TrkA-N domain C4J93_RS00070 PF02080 TrkA-C domain C4J93_RS00075 PF01029 NusB family C4J93_RS00075 PF01189 16S rRNA methyltransferase RsmB/F C4J93_RS00080 PF02911 Formyl transferase, C-terminal domain C4J93_RS00080 PF00551 Formyl transferase C4J93_RS00085 PF01327 Polypeptide deformylase C4J93_RS00095 PF17782 DprA winged helix domain C4J93_RS00095 PF02481 DNA recombination-mediator protein A C4J93_RS00100 PF01300 Telomere recombination C4J93_RS00105 PF00107 Zinc-binding dehydrogenase C4J93_RS00105 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS00110 PF01218 Coproporphyrinogen III oxidase C4J93_RS00115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C4J93_RS00115 PF01488 Shikimate / quinate 5-dehydrogenase C4J93_RS00115 PF08501 Shikimate dehydrogenase substrate binding domain C4J93_RS00120 PF01740 STAS domain C4J93_RS00120 PF00916 Sulfate permease family C4J93_RS00125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J93_RS00130 PF00884 Sulfatase C4J93_RS00130 PF12411 Choline sulfatase enzyme C terminal C4J93_RS00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS00135 PF03466 LysR substrate binding domain C4J93_RS00145 PF05035 2-keto-3-deoxy-galactonokinase C4J93_RS00150 PF01081 KDPG and KHG aldolase C4J93_RS00155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J93_RS00155 PF13378 Enolase C-terminal domain-like C4J93_RS00160 PF07690 Major Facilitator Superfamily C4J93_RS00165 PF08031 Berberine and berberine like C4J93_RS00165 PF01565 FAD binding domain C4J93_RS00170 PF00290 Tryptophan synthase alpha chain C4J93_RS00175 PF00291 Pyridoxal-phosphate dependent enzyme C4J93_RS00180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS00180 PF03466 LysR substrate binding domain C4J93_RS00190 PF07311 Dodecin C4J93_RS00200 PF00296 Luciferase-like monooxygenase C4J93_RS00205 PF02566 OsmC-like protein C4J93_RS00225 PF18807 Tripartite Tc toxins repeat C4J93_RS00225 PF14431 YwqJ-like deaminase C4J93_RS00230 PF13419 Haloacid dehalogenase-like hydrolase C4J93_RS00235 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS00240 PF01432 Peptidase family M3 C4J93_RS00255 PF13618 Gluconate 2-dehydrogenase subunit 3 C4J93_RS00260 PF05199 GMC oxidoreductase C4J93_RS00260 PF00732 GMC oxidoreductase C4J93_RS00265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J93_RS00265 PF00034 Cytochrome c C4J93_RS00270 PF04055 Radical SAM superfamily C4J93_RS00275 PF00484 Carbonic anhydrase C4J93_RS00280 PF01740 STAS domain C4J93_RS00280 PF00916 Sulfate permease family C4J93_RS00290 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C4J93_RS00290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4J93_RS00295 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J93_RS00300 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C4J93_RS00305 PF00510 Cytochrome c oxidase subunit III C4J93_RS00325 PF02628 Cytochrome oxidase assembly protein C4J93_RS00330 PF01040 UbiA prenyltransferase family C4J93_RS00335 PF02630 SCO1/SenC C4J93_RS00340 PF03180 NLPA lipoprotein C4J93_RS00345 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS00350 PF00005 ABC transporter C4J93_RS00350 PF09383 NIL domain C4J93_RS00355 PF18011 C-terminal domain found in long catalases C4J93_RS00355 PF06628 Catalase-related immune-responsive C4J93_RS00355 PF00199 Catalase C4J93_RS00365 PF00950 ABC 3 transport family C4J93_RS00370 PF00005 ABC transporter C4J93_RS00375 PF01475 Ferric uptake regulator family C4J93_RS00380 PF01297 Zinc-uptake complex component A periplasmic C4J93_RS00385 PF01636 Phosphotransferase enzyme family C4J93_RS00395 PF01367 5'-3' exonuclease, C-terminal SAM fold C4J93_RS00395 PF00476 DNA polymerase family A C4J93_RS00395 PF01612 3'-5' exonuclease C4J93_RS00395 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C4J93_RS00400 PF01926 50S ribosome-binding GTPase C4J93_RS00410 PF00034 Cytochrome c C4J93_RS00415 PF01323 DSBA-like thioredoxin domain C4J93_RS00425 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS00430 PF01510 N-acetylmuramoyl-L-alanine amidase C4J93_RS00435 PF00672 HAMP domain C4J93_RS00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS00435 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS00435 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB C4J93_RS00435 PF08448 PAS fold C4J93_RS00440 PF02954 Bacterial regulatory protein, Fis family C4J93_RS00440 PF00072 Response regulator receiver domain C4J93_RS00440 PF00158 Sigma-54 interaction domain C4J93_RS00450 PF07043 Protein of unknown function (DUF1328) C4J93_RS00460 PF00375 Sodium:dicarboxylate symporter family C4J93_RS00465 PF07670 Nucleoside recognition C4J93_RS00480 PF00005 ABC transporter C4J93_RS00485 PF02405 Permease MlaE C4J93_RS00495 PF00675 Insulinase (Peptidase family M16) C4J93_RS00495 PF05193 Peptidase M16 inactive domain C4J93_RS00500 PF02690 Na+/Pi-cotransporter C4J93_RS00505 PF03741 Integral membrane protein TerC family C4J93_RS00510 PF03600 Citrate transporter C4J93_RS00540 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C4J93_RS00540 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C4J93_RS00545 PF02233 NAD(P) transhydrogenase beta subunit C4J93_RS00550 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C4J93_RS00555 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C4J93_RS00555 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C4J93_RS00560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS00560 PF03466 LysR substrate binding domain C4J93_RS00565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS00565 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS00565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS00610 PF02743 Cache domain C4J93_RS00610 PF00672 HAMP domain C4J93_RS00610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS00615 PF00975 Thioesterase domain C4J93_RS00615 PF00501 AMP-binding enzyme C4J93_RS00615 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS00615 PF00668 Condensation domain C4J93_RS00615 PF00550 Phosphopantetheine attachment site C4J93_RS00640 PF13188 PAS domain C4J93_RS00640 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS00640 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS00640 PF00563 EAL domain C4J93_RS00660 PF00664 ABC transporter transmembrane region C4J93_RS00660 PF00005 ABC transporter C4J93_RS00660 PF03412 Peptidase C39 family C4J93_RS00665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS00665 PF00529 HlyD membrane-fusion protein of T1SS C4J93_RS00670 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C4J93_RS00675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS00675 PF03466 LysR substrate binding domain C4J93_RS00680 PF07690 Major Facilitator Superfamily C4J93_RS00685 PF13533 Biotin-lipoyl like C4J93_RS00785 PF04632 Fusaric acid resistance protein family C4J93_RS00795 PF13533 Biotin-lipoyl like C4J93_RS00800 PF02321 Outer membrane efflux protein C4J93_RS00810 PF06097 Bacterial protein of unknown function (DUF945) C4J93_RS00820 PF01522 Polysaccharide deacetylase C4J93_RS00820 PF14883 Hypothetical glycosyl hydrolase family 13 C4J93_RS00825 PF00535 Glycosyl transferase family 2 C4J93_RS00835 PF08479 POTRA domain, ShlB-type C4J93_RS00835 PF17287 POTRA domain C4J93_RS00835 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB C4J93_RS00840 PF04829 Pre-toxin domain with VENN motif C4J93_RS00840 PF05860 haemagglutination activity domain C4J93_RS00840 PF13332 Hemagglutinin repeat C4J93_RS00840 PF05594 Haemagluttinin repeat C4J93_RS00840 PF14436 Bacterial EndoU nuclease C4J93_RS00895 PF03783 Curli production assembly/transport component CsgG C4J93_RS00905 PF05643 Putative bacterial lipoprotein (DUF799) C4J93_RS00910 PF00092 von Willebrand factor type A domain C4J93_RS00910 PF12450 von Willebrand factor C4J93_RS00910 PF12034 Domain of unknown function (DUF3520) C4J93_RS00915 PF04542 Sigma-70 region 2 C4J93_RS00915 PF04545 Sigma-70, region 4 C4J93_RS00925 PF03526 Colicin E1 (microcin) immunity protein C4J93_RS00930 PF01024 Colicin pore forming domain C4J93_RS00930 PF11504 Colicin Ia C4J93_RS00940 PF00171 Aldehyde dehydrogenase family C4J93_RS00945 PF00202 Aminotransferase class-III C4J93_RS00955 PF00795 Carbon-nitrogen hydrolase C4J93_RS00960 PF01593 Flavin containing amine oxidoreductase C4J93_RS00965 PF08448 PAS fold C4J93_RS00965 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS00975 PF00563 EAL domain C4J93_RS00975 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS00975 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS00995 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01000 PF00005 ABC transporter C4J93_RS01000 PF12857 TOBE-like domain C4J93_RS01010 PF00576 HIUase/Transthyretin family C4J93_RS01020 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS01020 PF00072 Response regulator receiver domain C4J93_RS01030 PF12833 Helix-turn-helix domain C4J93_RS01030 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J93_RS01040 PF00005 ABC transporter C4J93_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01050 PF09084 NMT1/THI5 like C4J93_RS01055 PF03466 LysR substrate binding domain C4J93_RS01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS01060 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C4J93_RS01065 PF16347 Domain of unknown function (DUF4976) C4J93_RS01065 PF00884 Sulfatase C4J93_RS01070 PF03466 LysR substrate binding domain C4J93_RS01070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS01075 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS01075 PF00593 TonB dependent receptor C4J93_RS01080 PF07690 Major Facilitator Superfamily C4J93_RS01085 PF03544 Gram-negative bacterial TonB protein C-terminal C4J93_RS01090 PF01618 MotA/TolQ/ExbB proton channel family C4J93_RS01095 PF02472 Biopolymer transport protein ExbD/TolR C4J93_RS01105 PF00665 Integrase core domain C4J93_RS01115 PF00158 Sigma-54 interaction domain C4J93_RS01120 PF03180 NLPA lipoprotein C4J93_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01135 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01140 PF00005 ABC transporter C4J93_RS01145 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS01150 PF13476 AAA domain C4J93_RS01160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS01165 PF00873 AcrB/AcrD/AcrF family C4J93_RS01180 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01185 PF00005 ABC transporter C4J93_RS01185 PF09383 NIL domain C4J93_RS01190 PF03180 NLPA lipoprotein C4J93_RS01200 PF00296 Luciferase-like monooxygenase C4J93_RS01205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS01205 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS01210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS01210 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS01220 PF00005 ABC transporter C4J93_RS01225 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01230 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS01235 PF00291 Pyridoxal-phosphate dependent enzyme C4J93_RS01240 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS01245 PF02028 BCCT, betaine/carnitine/choline family transporter C4J93_RS01265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS01265 PF03466 LysR substrate binding domain C4J93_RS01270 PF00248 Aldo/keto reductase family C4J93_RS01275 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C4J93_RS01280 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01285 PF00005 ABC transporter C4J93_RS01290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J93_RS01295 PF04262 Glutamate-cysteine ligase C4J93_RS01305 PF16921 Tex protein YqgF-like domain C4J93_RS01305 PF09371 Tex-like protein N-terminal domain C4J93_RS01305 PF00575 S1 RNA binding domain C4J93_RS01305 PF17674 HHH domain C4J93_RS01310 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS01310 PF00072 Response regulator receiver domain C4J93_RS01315 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS01315 PF00672 HAMP domain C4J93_RS01320 PF18030 RimK PreATP-grasp domain C4J93_RS01320 PF08443 RimK-like ATP-grasp domain C4J93_RS01325 PF18030 RimK PreATP-grasp domain C4J93_RS01325 PF08443 RimK-like ATP-grasp domain C4J93_RS01330 PF00563 EAL domain C4J93_RS01330 PF12792 CSS motif domain associated with EAL C4J93_RS01335 PF01479 S4 domain C4J93_RS01345 PF01430 Hsp33 protein C4J93_RS01350 PF01293 Phosphoenolpyruvate carboxykinase C4J93_RS01375 PF02661 Fic/DOC family C4J93_RS01390 PF16124 RecQ zinc-binding C4J93_RS01390 PF00570 HRDC domain C4J93_RS01390 PF00270 DEAD/DEAH box helicase C4J93_RS01390 PF00271 Helicase conserved C-terminal domain C4J93_RS01390 PF09382 RQC domain C4J93_RS01395 PF03061 Thioesterase superfamily C4J93_RS01405 PF00384 Molybdopterin oxidoreductase C4J93_RS01410 PF02634 FdhD/NarQ family C4J93_RS01415 PF01476 LysM domain C4J93_RS01415 PF04972 BON domain C4J93_RS01420 PF13419 Haloacid dehalogenase-like hydrolase C4J93_RS01425 PF00293 NUDIX domain C4J93_RS01430 PF00459 Inositol monophosphatase family C4J93_RS01440 PF02954 Bacterial regulatory protein, Fis family C4J93_RS01440 PF00072 Response regulator receiver domain C4J93_RS01440 PF00158 Sigma-54 interaction domain C4J93_RS01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS01445 PF02743 Cache domain C4J93_RS01445 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS01450 PF04321 RmlD substrate binding domain C4J93_RS01455 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C4J93_RS01460 PF00483 Nucleotidyl transferase C4J93_RS01465 PF16363 GDP-mannose 4,6 dehydratase C4J93_RS01470 PF00202 Aminotransferase class-III C4J93_RS01475 PF04371 Porphyromonas-type peptidyl-arginine deiminase C4J93_RS01485 PF03573 outer membrane porin, OprD family C4J93_RS01490 PF13006 Insertion element 4 transposase N-terminal C4J93_RS01490 PF13006 Insertion element 4 transposase N-terminal C4J93_RS01490 PF01609 Transposase DDE domain C4J93_RS01490 PF01609 Transposase DDE domain C4J93_RS01510 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J93_RS01510 PF08659 KR domain C4J93_RS01510 PF00550 Phosphopantetheine attachment site C4J93_RS01510 PF14765 Polyketide synthase dehydratase C4J93_RS01510 PF16197 Ketoacyl-synthetase C-terminal extension C4J93_RS01510 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS01510 PF00698 Acyl transferase domain C4J93_RS01510 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J93_RS01510 PF08990 Erythronolide synthase docking C4J93_RS01520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J93_RS01525 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS01530 PF03466 LysR substrate binding domain C4J93_RS01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS01535 PF07690 Major Facilitator Superfamily C4J93_RS01580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J93_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01600 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS01605 PF00005 ABC transporter C4J93_RS01610 PF00324 Amino acid permease C4J93_RS01630 PF08479 POTRA domain, ShlB-type C4J93_RS01630 PF17287 POTRA domain C4J93_RS01630 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB C4J93_RS01635 PF13332 Hemagglutinin repeat C4J93_RS01635 PF05594 Haemagluttinin repeat C4J93_RS01635 PF15526 Novel toxin 21 C4J93_RS01635 PF05860 haemagglutination activity domain C4J93_RS01635 PF04829 Pre-toxin domain with VENN motif C4J93_RS01680 PF04362 Bacterial Fe(2+) trafficking C4J93_RS01685 PF10576 Iron-sulfur binding domain of endonuclease III C4J93_RS01685 PF00633 Helix-hairpin-helix motif C4J93_RS01685 PF00730 HhH-GPD superfamily base excision DNA repair protein C4J93_RS01685 PF14815 NUDIX domain C4J93_RS01695 PF07690 Major Facilitator Superfamily C4J93_RS01700 PF00475 Imidazoleglycerol-phosphate dehydratase C4J93_RS01705 PF00117 Glutamine amidotransferase class-I C4J93_RS01715 PF00977 Histidine biosynthesis protein C4J93_RS01720 PF00977 Histidine biosynthesis protein C4J93_RS01730 PF04748 Divergent polysaccharide deacetylase C4J93_RS01735 PF13180 PDZ domain C4J93_RS01735 PF03572 Peptidase family S41 C4J93_RS01740 PF01551 Peptidase family M23 C4J93_RS01745 PF01676 Metalloenzyme superfamily C4J93_RS01745 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C4J93_RS01750 PF00581 Rhodanese-like domain C4J93_RS01755 PF00462 Glutaredoxin C4J93_RS01760 PF02556 Preprotein translocase subunit SecB C4J93_RS01780 PF00158 Sigma-54 interaction domain C4J93_RS01780 PF00072 Response regulator receiver domain C4J93_RS01780 PF02954 Bacterial regulatory protein, Fis family C4J93_RS01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS01785 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS01785 PF00989 PAS fold C4J93_RS01790 PF01817 Chorismate mutase type II C4J93_RS01795 PF03951 Glutamine synthetase, beta-Grasp domain C4J93_RS01795 PF00120 Glutamine synthetase, catalytic domain C4J93_RS01805 PF02926 THUMP domain C4J93_RS01805 PF02568 Thiamine biosynthesis protein (ThiI) C4J93_RS01810 PF00679 Elongation factor G C-terminus C4J93_RS01810 PF03144 Elongation factor Tu domain 2 C4J93_RS01810 PF00009 Elongation factor Tu GTP binding domain C4J93_RS01820 PF00343 Carbohydrate phosphorylase C4J93_RS01835 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C4J93_RS01845 PF08212 Lipocalin-like domain C4J93_RS01850 PF01979 Amidohydrolase family C4J93_RS01855 PF07702 UTRA domain C4J93_RS01855 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS01860 PF05962 HutD C4J93_RS01865 PF17392 Urocanase C-terminal domain C4J93_RS01865 PF01175 Urocanase Rossmann-like domain C4J93_RS01865 PF17391 Urocanase N-terminal domain C4J93_RS01870 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J93_RS01880 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01885 PF00005 ABC transporter C4J93_RS01885 PF00571 CBS domain C4J93_RS01890 PF00221 Aromatic amino acid lyase C4J93_RS01895 PF00221 Aromatic amino acid lyase C4J93_RS01900 PF01979 Amidohydrolase family C4J93_RS01920 PF02580 D-Tyr-tRNA(Tyr) deacylase C4J93_RS01925 PF04349 Periplasmic glucan biosynthesis protein, MdoG C4J93_RS01930 PF00535 Glycosyl transferase family 2 C4J93_RS01935 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS01940 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS01945 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS01950 PF00005 ABC transporter C4J93_RS01955 PF00672 HAMP domain C4J93_RS01955 PF16591 Helical bimodular sensor domain C4J93_RS01955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS01960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS01960 PF00672 HAMP domain C4J93_RS01960 PF16591 Helical bimodular sensor domain C4J93_RS01975 PF06476 Protein of unknown function (DUF1090) C4J93_RS01980 PF01653 NAD-dependent DNA ligase adenylation domain C4J93_RS01980 PF03120 NAD-dependent DNA ligase OB-fold domain C4J93_RS01985 PF00438 S-adenosylmethionine synthetase, N-terminal domain C4J93_RS01985 PF02772 S-adenosylmethionine synthetase, central domain C4J93_RS01985 PF02773 S-adenosylmethionine synthetase, C-terminal domain C4J93_RS01990 PF01022 Bacterial regulatory protein, arsR family C4J93_RS01995 PF00456 Transketolase, thiamine diphosphate binding domain C4J93_RS01995 PF02780 Transketolase, C-terminal domain C4J93_RS01995 PF02779 Transketolase, pyrimidine binding domain C4J93_RS02005 PF00162 Phosphoglycerate kinase C4J93_RS02020 PF01116 Fructose-bisphosphate aldolase class-II C4J93_RS02035 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS02035 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS02035 PF00563 EAL domain C4J93_RS02040 PF01863 Protein of unknown function DUF45 C4J93_RS02050 PF13673 Acetyltransferase (GNAT) domain C4J93_RS02060 PF12805 FUSC-like inner membrane protein yccS C4J93_RS02070 PF03880 DbpA RNA binding domain C4J93_RS02070 PF00271 Helicase conserved C-terminal domain C4J93_RS02070 PF00270 DEAD/DEAH box helicase C4J93_RS02075 PF07690 Major Facilitator Superfamily C4J93_RS02080 PF00561 alpha/beta hydrolase fold C4J93_RS02100 PF00732 GMC oxidoreductase C4J93_RS02100 PF05199 GMC oxidoreductase C4J93_RS02105 PF00171 Aldehyde dehydrogenase family C4J93_RS02110 PF13977 BetI-type transcriptional repressor, C-terminal C4J93_RS02110 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS02115 PF02028 BCCT, betaine/carnitine/choline family transporter C4J93_RS02120 PF00005 ABC transporter C4J93_RS02120 PF00571 CBS domain C4J93_RS02125 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS02130 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J93_RS02135 PF03313 Serine dehydratase alpha chain C4J93_RS02135 PF03315 Serine dehydratase beta chain C4J93_RS02140 PF07690 Major Facilitator Superfamily C4J93_RS02145 PF03466 LysR substrate binding domain C4J93_RS02145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS02160 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J93_RS02160 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J93_RS02175 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J93_RS02175 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J93_RS02185 PF08241 Methyltransferase domain C4J93_RS02190 PF01494 FAD binding domain C4J93_RS02210 PF00221 Aromatic amino acid lyase C4J93_RS02225 PF07977 FabA-like domain C4J93_RS02235 PF00550 Phosphopantetheine attachment site C4J93_RS02240 PF00550 Phosphopantetheine attachment site C4J93_RS02255 PF13614 AAA domain C4J93_RS02265 PF00085 Thioredoxin C4J93_RS02280 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C4J93_RS02285 PF12794 Mechanosensitive ion channel inner membrane domain 1 C4J93_RS02285 PF00924 Mechanosensitive ion channel C4J93_RS02285 PF12795 Mechanosensitive ion channel porin domain C4J93_RS02290 PF02080 TrkA-C domain C4J93_RS02290 PF03471 Transporter associated domain C4J93_RS02290 PF00999 Sodium/hydrogen exchanger family C4J93_RS02295 PF00672 HAMP domain C4J93_RS02295 PF12729 Four helix bundle sensory module for signal transduction C4J93_RS02295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS02310 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J93_RS02310 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS02310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS02310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS02315 PF01619 Proline dehydrogenase C4J93_RS02315 PF00171 Aldehyde dehydrogenase family C4J93_RS02315 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C4J93_RS02315 PF14850 DNA-binding domain of Proline dehydrogenase C4J93_RS02325 PF00474 Sodium:solute symporter family C4J93_RS02330 PF04717 Type VI secretion system, phage-baseplate injector C4J93_RS02340 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C4J93_RS02345 PF01625 Peptide methionine sulfoxide reductase C4J93_RS02350 PF00563 EAL domain C4J93_RS02350 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS02350 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS02355 PF00364 Biotin-requiring enzyme C4J93_RS02355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4J93_RS02355 PF02817 e3 binding domain C4J93_RS02360 PF17831 Pyruvate dehydrogenase E1 component middle domain C4J93_RS02360 PF00456 Transketolase, thiamine diphosphate binding domain C4J93_RS02365 PF03710 Glutamate-ammonia ligase adenylyltransferase C4J93_RS02365 PF08335 GlnD PII-uridylyltransferase C4J93_RS02370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4J93_RS02375 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4J93_RS02380 PF00534 Glycosyl transferases group 1 C4J93_RS02380 PF13439 Glycosyltransferase Family 4 C4J93_RS02400 PF00069 Protein kinase domain C4J93_RS02405 PF00593 TonB dependent receptor C4J93_RS02405 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS02415 PF02543 Carbamoyltransferase N-terminus C4J93_RS02415 PF16861 Carbamoyltransferase C-terminus C4J93_RS02430 PF13579 Glycosyl transferase 4-like domain C4J93_RS02430 PF00534 Glycosyl transferases group 1 C4J93_RS02435 PF00535 Glycosyl transferase family 2 C4J93_RS02440 PF04932 O-Antigen ligase C4J93_RS02445 PF00664 ABC transporter transmembrane region C4J93_RS02445 PF00005 ABC transporter C4J93_RS02450 PF01467 Cytidylyltransferase-like C4J93_RS02450 PF00294 pfkB family carbohydrate kinase C4J93_RS02455 PF16363 GDP-mannose 4,6 dehydratase C4J93_RS02465 PF00248 Aldo/keto reductase family C4J93_RS02470 PF01266 FAD dependent oxidoreductase C4J93_RS02475 PF00893 Small Multidrug Resistance protein C4J93_RS02480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS02480 PF03466 LysR substrate binding domain C4J93_RS02485 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C4J93_RS02490 PF02321 Outer membrane efflux protein C4J93_RS02495 PF01964 Radical SAM ThiC family C4J93_RS02495 PF13667 ThiC-associated domain C4J93_RS02515 PF00293 NUDIX domain C4J93_RS02525 PF00149 Calcineurin-like phosphoesterase C4J93_RS02535 PF07690 Major Facilitator Superfamily C4J93_RS02545 PF05728 Uncharacterised protein family (UPF0227) C4J93_RS02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS02550 PF01751 Toprim domain C4J93_RS02550 PF00986 DNA gyrase B subunit, carboxyl terminus C4J93_RS02550 PF00204 DNA gyrase B C4J93_RS02560 PF00521 DNA gyrase/topoisomerase IV, subunit A C4J93_RS02560 PF03989 DNA gyrase C-terminal domain, beta-propeller C4J93_RS02580 PF02666 Phosphatidylserine decarboxylase C4J93_RS02585 PF00581 Rhodanese-like domain C4J93_RS02595 PF01618 MotA/TolQ/ExbB proton channel family C4J93_RS02600 PF00691 OmpA family C4J93_RS02600 PF13677 Membrane MotB of proton-channel complex MotA/MotB C4J93_RS02610 PF03193 RsgA GTPase C4J93_RS02615 PF00929 Exonuclease C4J93_RS02620 PF03458 UPF0126 domain C4J93_RS02625 PF08331 Domain of unknown function (DUF1730) C4J93_RS02630 PF03853 YjeF-related protein N-terminus C4J93_RS02630 PF01256 Carbohydrate kinase C4J93_RS02635 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C4J93_RS02640 PF01520 N-acetylmuramoyl-L-alanine amidase C4J93_RS02640 PF11741 AMIN domain C4J93_RS02645 PF01119 DNA mismatch repair protein, C-terminal domain C4J93_RS02645 PF08676 MutL C terminal dimerisation domain C4J93_RS02655 PF17209 Hfq protein C4J93_RS02660 PF01926 50S ribosome-binding GTPase C4J93_RS02660 PF13167 GTP-binding GTPase N-terminal C4J93_RS02660 PF16360 GTP-binding GTPase Middle Region C4J93_RS02665 PF01145 SPFH domain / Band 7 family C4J93_RS02670 PF01145 SPFH domain / Band 7 family C4J93_RS02675 PF13393 Histidyl-tRNA synthetase C4J93_RS02680 PF00709 Adenylosuccinate synthetase C4J93_RS02685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS02685 PF00672 HAMP domain C4J93_RS02685 PF17200 Single Cache domain 2 C4J93_RS02690 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS02695 PF01547 Bacterial extracellular solute-binding protein C4J93_RS02710 PF08461 Ribonuclease R winged-helix domain C4J93_RS02710 PF00773 RNB domain C4J93_RS02710 PF08206 Ribonuclease B OB domain C4J93_RS02710 PF00575 S1 RNA binding domain C4J93_RS02710 PF17876 Cold shock domain C4J93_RS02715 PF08032 RNA 2'-O ribose methyltransferase substrate binding C4J93_RS02715 PF00588 SpoU rRNA Methylase family C4J93_RS02720 PF01250 Ribosomal protein S6 C4J93_RS02725 PF01084 Ribosomal protein S18 C4J93_RS02735 PF03948 Ribosomal protein L9, C-terminal domain C4J93_RS02735 PF01281 Ribosomal protein L9, N-terminal domain C4J93_RS02740 PF00772 DnaB-like helicase N terminal domain C4J93_RS02740 PF03796 DnaB-like helicase C terminal domain C4J93_RS02750 PF04055 Radical SAM superfamily C4J93_RS02750 PF11842 Domain of unknown function (DUF3362) C4J93_RS02750 PF08497 Radical SAM N-terminal C4J93_RS02770 PF14403 Circularly permuted ATP-grasp type 2 C4J93_RS02770 PF04168 A predicted alpha-helical domain with a conserved ER motif. C4J93_RS02790 PF00127 Copper binding proteins, plastocyanin/azurin family C4J93_RS02795 PF02540 NAD synthase C4J93_RS02800 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C4J93_RS02800 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C4J93_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS02805 PF03466 LysR substrate binding domain C4J93_RS02810 PF00171 Aldehyde dehydrogenase family C4J93_RS02815 PF01266 FAD dependent oxidoreductase C4J93_RS02820 PF13458 Periplasmic binding protein C4J93_RS02825 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS02830 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS02830 PF11862 Domain of unknown function (DUF3382) C4J93_RS02835 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J93_RS02835 PF00005 ABC transporter C4J93_RS02840 PF00005 ABC transporter C4J93_RS02850 PF00106 short chain dehydrogenase C4J93_RS02865 PF04955 HupE / UreJ protein C4J93_RS02870 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J93_RS02875 PF01730 UreF C4J93_RS02880 PF05194 UreE urease accessory protein, C-terminal domain C4J93_RS02880 PF02814 UreE urease accessory protein, N-terminal domain C4J93_RS02885 PF00877 NlpC/P60 family C4J93_RS02890 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS02900 PF05170 AsmA family C4J93_RS02910 PF07769 psiF repeat C4J93_RS02920 PF00012 Hsp70 protein C4J93_RS02925 PF00226 DnaJ domain C4J93_RS02925 PF01556 DnaJ C terminal domain C4J93_RS02930 PF01979 Amidohydrolase family C4J93_RS02930 PF00449 Urease alpha-subunit, N-terminal domain C4J93_RS02935 PF00699 Urease beta subunit C4J93_RS02940 PF13673 Acetyltransferase (GNAT) domain C4J93_RS02950 PF00547 Urease, gamma subunit C4J93_RS02955 PF01774 UreD urease accessory protein C4J93_RS02960 PF00005 ABC transporter C4J93_RS02965 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J93_RS02965 PF00005 ABC transporter C4J93_RS02980 PF00158 Sigma-54 interaction domain C4J93_RS02980 PF13188 PAS domain C4J93_RS02980 PF02954 Bacterial regulatory protein, Fis family C4J93_RS03020 PF01381 Helix-turn-helix C4J93_RS03040 PF02571 Precorrin-6x reductase CbiJ/CobK C4J93_RS03055 PF02570 Precorrin-8X methylmutase C4J93_RS03060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J93_RS03065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J93_RS03075 PF01914 MarC family integral membrane protein C4J93_RS03095 PF00665 Integrase core domain C4J93_RS03100 PF00072 Response regulator receiver domain C4J93_RS03100 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J93_RS03100 PF01627 Hpt domain C4J93_RS03100 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS03100 PF00672 HAMP domain C4J93_RS03105 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C4J93_RS03105 PF02843 Phosphoribosylglycinamide synthetase, C domain C4J93_RS03105 PF02844 Phosphoribosylglycinamide synthetase, N domain C4J93_RS03110 PF01808 AICARFT/IMPCHase bienzyme C4J93_RS03110 PF02142 MGS-like domain C4J93_RS03115 PF02954 Bacterial regulatory protein, Fis family C4J93_RS03120 PF01207 Dihydrouridine synthase (Dus) C4J93_RS03140 PF00289 Biotin carboxylase, N-terminal domain C4J93_RS03140 PF02785 Biotin carboxylase C-terminal domain C4J93_RS03140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J93_RS03145 PF00364 Biotin-requiring enzyme C4J93_RS03150 PF01220 Dehydroquinase class II C4J93_RS03155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS03160 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS03160 PF00072 Response regulator receiver domain C4J93_RS03170 PF00293 NUDIX domain C4J93_RS03175 PF01253 Translation initiation factor SUI1 C4J93_RS03180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4J93_RS03180 PF17944 Arginine decarboxylase C-terminal helical extension C4J93_RS03180 PF17810 Arginine decarboxylase helical bundle domain C4J93_RS03185 PF01554 MatE C4J93_RS03190 PF01835 MG2 domain C4J93_RS03190 PF07678 A-macroglobulin TED domain C4J93_RS03190 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C4J93_RS03190 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C4J93_RS03190 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C4J93_RS03190 PF17962 Bacterial macroglobulin domain 6 C4J93_RS03190 PF07703 Alpha-2-macroglobulin bait region domain C4J93_RS03190 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C4J93_RS03190 PF00207 Alpha-2-macroglobulin family C4J93_RS03200 PF00912 Transglycosylase C4J93_RS03200 PF00905 Penicillin binding protein transpeptidase domain C4J93_RS03200 PF06832 Penicillin-Binding Protein C-terminus Family C4J93_RS03210 PF13847 Methyltransferase domain C4J93_RS03230 PF08448 PAS fold C4J93_RS03230 PF08447 PAS fold C4J93_RS03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS03245 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS03245 PF00072 Response regulator receiver domain C4J93_RS03270 PF00437 Type II/IV secretion system protein C4J93_RS03280 PF13629 Pilus formation protein N terminal region C4J93_RS03280 PF00263 Bacterial type II and III secretion system protein C4J93_RS03280 PF04972 BON domain C4J93_RS03295 PF02954 Bacterial regulatory protein, Fis family C4J93_RS03295 PF00158 Sigma-54 interaction domain C4J93_RS03295 PF00072 Response regulator receiver domain C4J93_RS03320 PF02803 Thiolase, C-terminal domain C4J93_RS03320 PF00108 Thiolase, N-terminal domain C4J93_RS03330 PF00376 MerR family regulatory protein C4J93_RS03330 PF09278 MerR, DNA binding C4J93_RS03335 PF00403 Heavy-metal-associated domain C4J93_RS03355 PF07690 Major Facilitator Superfamily C4J93_RS03360 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS03360 PF00107 Zinc-binding dehydrogenase C4J93_RS03365 PF03992 Antibiotic biosynthesis monooxygenase C4J93_RS03370 PF03466 LysR substrate binding domain C4J93_RS03370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS03380 PF07690 Major Facilitator Superfamily C4J93_RS03385 PF00962 Adenosine/AMP deaminase C4J93_RS03390 PF01699 Sodium/calcium exchanger protein C4J93_RS03395 PF01979 Amidohydrolase family C4J93_RS03405 PF01205 Uncharacterized protein family UPF0029 C4J93_RS03410 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS03410 PF08362 YcdC-like protein, C-terminal region C4J93_RS03415 PF00860 Permease family C4J93_RS03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS03420 PF03466 LysR substrate binding domain C4J93_RS03425 PF00202 Aminotransferase class-III C4J93_RS03430 PF00171 Aldehyde dehydrogenase family C4J93_RS03465 PF04403 Paraquat-inducible protein A C4J93_RS03470 PF04403 Paraquat-inducible protein A C4J93_RS03475 PF02470 MlaD protein C4J93_RS03500 PF00583 Acetyltransferase (GNAT) family C4J93_RS03510 PF00484 Carbonic anhydrase C4J93_RS03520 PF04185 Phosphoesterase family C4J93_RS03535 PF02667 Short chain fatty acid transporter C4J93_RS03540 PF08946 Osmosensory transporter coiled coil C4J93_RS03540 PF00083 Sugar (and other) transporter C4J93_RS03555 PF02321 Outer membrane efflux protein C4J93_RS03560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS03560 PF00529 HlyD membrane-fusion protein of T1SS C4J93_RS03565 PF00873 AcrB/AcrD/AcrF family C4J93_RS03570 PF00672 HAMP domain C4J93_RS03570 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS03570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS03575 PF00072 Response regulator receiver domain C4J93_RS03575 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS03580 PF03573 outer membrane porin, OprD family C4J93_RS03590 PF08447 PAS fold C4J93_RS03590 PF13426 PAS domain C4J93_RS03590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS03615 PF08281 Sigma-70, region 4 C4J93_RS03615 PF04542 Sigma-70 region 2 C4J93_RS03625 PF00771 FHIPEP family C4J93_RS03635 PF18269 T3SS EscN ATPase C-terminal domain C4J93_RS03635 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J93_RS03635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J93_RS03650 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J93_RS03655 PF00813 FliP family C4J93_RS03660 PF01313 Bacterial export proteins, family 3 C4J93_RS03665 PF01311 Bacterial export proteins, family 1 C4J93_RS03670 PF01312 FlhB HrpN YscU SpaS Family C4J93_RS03685 PF00263 Bacterial type II and III secretion system protein C4J93_RS03685 PF03958 Bacterial type II/III secretion system short domain C4J93_RS03705 PF01514 Secretory protein of YscJ/FliF family C4J93_RS03720 PF00158 Sigma-54 interaction domain C4J93_RS03720 PF02954 Bacterial regulatory protein, Fis family C4J93_RS03725 PF01926 50S ribosome-binding GTPase C4J93_RS03725 PF06071 Protein of unknown function (DUF933) C4J93_RS03730 PF01195 Peptidyl-tRNA hydrolase C4J93_RS03735 PF01386 Ribosomal L25p family C4J93_RS03735 PF14693 Ribosomal protein TL5, C-terminal domain C4J93_RS03740 PF14572 Phosphoribosyl synthetase-associated domain C4J93_RS03740 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C4J93_RS03750 PF08544 GHMP kinases C terminal C4J93_RS03750 PF00288 GHMP kinases N terminal domain C4J93_RS03755 PF03550 Outer membrane lipoprotein LolB C4J93_RS03765 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C4J93_RS03765 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C4J93_RS03765 PF01488 Shikimate / quinate 5-dehydrogenase C4J93_RS03770 PF00472 RF-1 domain C4J93_RS03770 PF03462 PCRF domain C4J93_RS03775 PF05175 Methyltransferase small domain C4J93_RS03775 PF17827 PrmC N-terminal domain C4J93_RS03780 PF00899 ThiF family C4J93_RS03790 PF09411 Lipid A 3-O-deacylase (PagL) C4J93_RS03820 PF00106 short chain dehydrogenase C4J93_RS03825 PF00875 DNA photolyase C4J93_RS03825 PF03441 FAD binding domain of DNA photolyase C4J93_RS03830 PF13411 MerR HTH family regulatory protein C4J93_RS03845 PF01593 Flavin containing amine oxidoreductase C4J93_RS03850 PF01370 NAD dependent epimerase/dehydratase family C4J93_RS03850 PF08338 Domain of unknown function (DUF1731) C4J93_RS03855 PF00762 Ferrochelatase C4J93_RS03860 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS03860 PF00593 TonB dependent receptor C4J93_RS03865 PF13180 PDZ domain C4J93_RS03870 PF01784 NIF3 (NGG1p interacting factor 3) C4J93_RS03875 PF01507 Phosphoadenosine phosphosulfate reductase family C4J93_RS03880 PF00009 Elongation factor Tu GTP binding domain C4J93_RS03885 PF01553 Acyltransferase C4J93_RS03890 PF01515 Phosphate acetyl/butaryl transferase C4J93_RS03890 PF07085 DRTGG domain C4J93_RS03900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J93_RS03905 PF01649 Ribosomal protein S20 C4J93_RS03915 PF06574 FAD synthetase C4J93_RS03915 PF01687 Riboflavin kinase C4J93_RS03920 PF08264 Anticodon-binding domain of tRNA C4J93_RS03920 PF00133 tRNA synthetases class I (I, L, M and V) C4J93_RS03920 PF06827 Zinc finger found in FPG and IleRS C4J93_RS03925 PF01252 Signal peptidase (SPase) II C4J93_RS03930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J93_RS03935 PF02401 LytB protein C4J93_RS03940 PF08334 Type II secretion system (T2SS), protein G C4J93_RS03940 PF07963 Prokaryotic N-terminal methylation motif C4J93_RS03960 PF07963 Prokaryotic N-terminal methylation motif C4J93_RS03960 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor C4J93_RS03965 PF01266 FAD dependent oxidoreductase C4J93_RS03975 PF13525 Outer membrane lipoprotein C4J93_RS03980 PF00849 RNA pseudouridylate synthase C4J93_RS03980 PF01479 S4 domain C4J93_RS03985 PF02578 Multi-copper polyphenol oxidoreductase laccase C4J93_RS03990 PF07724 AAA domain (Cdc48 subfamily) C4J93_RS03990 PF17871 AAA lid domain C4J93_RS03990 PF00004 ATPase family associated with various cellular activities (AAA) C4J93_RS03990 PF10431 C-terminal, D2-small domain, of ClpB protein C4J93_RS03990 PF02861 Clp amino terminal domain, pathogenicity island component C4J93_RS04015 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS04040 PF03884 DNA gyrase inhibitor YacG C4J93_RS04045 PF01121 Dephospho-CoA kinase C4J93_RS04050 PF06750 Bacterial Peptidase A24 N-terminal domain C4J93_RS04050 PF01478 Type IV leader peptidase family C4J93_RS04055 PF00482 Type II secretion system (T2SS), protein F C4J93_RS04060 PF07963 Prokaryotic N-terminal methylation motif C4J93_RS04060 PF00114 Pilin (bacterial filament) C4J93_RS04075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C4J93_RS04075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C4J93_RS04085 PF01510 N-acetylmuramoyl-L-alanine amidase C4J93_RS04095 PF00672 HAMP domain C4J93_RS04095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS04095 PF17200 Single Cache domain 2 C4J93_RS04105 PF01026 TatD related DNase C4J93_RS04110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J93_RS04110 PF00356 Bacterial regulatory proteins, lacI family C4J93_RS04115 PF02896 PEP-utilising enzyme, TIM barrel domain C4J93_RS04115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C4J93_RS04115 PF05524 PEP-utilising enzyme, N-terminal C4J93_RS04115 PF00391 PEP-utilising enzyme, mobile domain C4J93_RS04115 PF00381 PTS HPr component phosphorylation site C4J93_RS04120 PF00294 pfkB family carbohydrate kinase C4J93_RS04125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C4J93_RS04125 PF02378 Phosphotransferase system, EIIC C4J93_RS04130 PF09423 PhoD-like phosphatase C4J93_RS04130 PF16655 PhoD-like phosphatase, N-terminal domain C4J93_RS04135 PF00667 FAD binding domain C4J93_RS04135 PF00258 Flavodoxin C4J93_RS04135 PF00175 Oxidoreductase NAD-binding domain C4J93_RS04140 PF00593 TonB dependent receptor C4J93_RS04140 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS04145 PF13640 2OG-Fe(II) oxygenase superfamily C4J93_RS04145 PF18331 PKHD-type hydroxylase C-terminal domain C4J93_RS04165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4J93_RS04165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4J93_RS04170 PF00571 CBS domain C4J93_RS04170 PF00005 ABC transporter C4J93_RS04175 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS04180 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J93_RS04185 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS04190 PF16658 Class II release factor RF3, C-terminal domain C4J93_RS04190 PF03144 Elongation factor Tu domain 2 C4J93_RS04190 PF00009 Elongation factor Tu GTP binding domain C4J93_RS04205 PF00005 ABC transporter C4J93_RS04205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J93_RS04210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J93_RS04210 PF00005 ABC transporter C4J93_RS04215 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J93_RS04215 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS04220 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS04225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J93_RS04230 PF03573 outer membrane porin, OprD family C4J93_RS04235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J93_RS04240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J93_RS04245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J93_RS04260 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS04265 PF00072 Response regulator receiver domain C4J93_RS04265 PF02954 Bacterial regulatory protein, Fis family C4J93_RS04270 PF00005 ABC transporter C4J93_RS04270 PF06472 ABC transporter transmembrane region 2 C4J93_RS04285 PF00579 tRNA synthetases class I (W and Y) C4J93_RS04290 PF03969 AFG1-like ATPase C4J93_RS04300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS04300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS04300 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS04310 PF00248 Aldo/keto reductase family C4J93_RS04315 PF00572 Ribosomal protein L13 C4J93_RS04320 PF00380 Ribosomal protein S9/S16 C4J93_RS04325 PF00355 Rieske [2Fe-2S] domain C4J93_RS04325 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C4J93_RS04330 PF00032 Cytochrome b(C-terminal)/b6/petD C4J93_RS04330 PF00033 Cytochrome b/b6/petB C4J93_RS04335 PF02167 Cytochrome C1 family C4J93_RS04340 PF02798 Glutathione S-transferase, N-terminal domain C4J93_RS04340 PF00043 Glutathione S-transferase, C-terminal domain C4J93_RS04345 PF04386 Stringent starvation protein B C4J93_RS04350 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS04350 PF07729 FCD domain C4J93_RS04360 PF00701 Dihydrodipicolinate synthetase family C4J93_RS04365 PF00171 Aldehyde dehydrogenase family C4J93_RS04370 PF07690 Major Facilitator Superfamily C4J93_RS04375 PF08666 SAF domain C4J93_RS04375 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C4J93_RS04400 PF02627 Carboxymuconolactone decarboxylase family C4J93_RS04405 PF01699 Sodium/calcium exchanger protein C4J93_RS04410 PF03330 Lytic transglycolase C4J93_RS04410 PF05036 Sporulation related domain C4J93_RS04415 PF02934 GatB/GatE catalytic domain C4J93_RS04415 PF02637 GatB domain C4J93_RS04420 PF01425 Amidase C4J93_RS04425 PF02686 Glu-tRNAGln amidotransferase C subunit C4J93_RS04435 PF04085 rod shape-determining protein MreC C4J93_RS04445 PF02545 Maf-like protein C4J93_RS04450 PF10150 Ribonuclease E/G family C4J93_RS04450 PF00575 S1 RNA binding domain C4J93_RS04460 PF00795 Carbon-nitrogen hydrolase C4J93_RS04465 PF01523 Putative modulator of DNA gyrase C4J93_RS04470 PF04751 Protein of unknown function (DUF615) C4J93_RS04475 PF01523 Putative modulator of DNA gyrase C4J93_RS04485 PF00206 Lyase C4J93_RS04485 PF10415 Fumarase C C-terminus C4J93_RS04495 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C4J93_RS04495 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C4J93_RS04500 PF02535 ZIP Zinc transporter C4J93_RS04505 PF00381 PTS HPr component phosphorylation site C4J93_RS04510 PF03668 P-loop ATPase protein family C4J93_RS04515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C4J93_RS04520 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C4J93_RS04525 PF00309 Sigma-54 factor, Activator interacting domain (AID) C4J93_RS04525 PF04963 Sigma-54 factor, core binding domain C4J93_RS04525 PF04552 Sigma-54, DNA binding domain C4J93_RS04530 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J93_RS04530 PF00005 ABC transporter C4J93_RS04535 PF03968 OstA-like protein C4J93_RS04550 PF01380 SIS domain C4J93_RS04550 PF00571 CBS domain C4J93_RS04555 PF00005 ABC transporter C4J93_RS04560 PF02405 Permease MlaE C4J93_RS04565 PF02470 MlaD protein C4J93_RS04570 PF05494 MlaC protein C4J93_RS04585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4J93_RS04595 PF01634 ATP phosphoribosyltransferase C4J93_RS04600 PF00815 Histidinol dehydrogenase C4J93_RS04605 PF00155 Aminotransferase class I and II C4J93_RS04610 PF00860 Permease family C4J93_RS04620 PF00156 Phosphoribosyl transferase domain C4J93_RS04635 PF06039 Malate:quinone oxidoreductase (Mqo) C4J93_RS04675 PF02586 SOS response associated peptidase (SRAP) C4J93_RS04680 PF01435 Peptidase family M48 C4J93_RS04685 PF01169 Uncharacterized protein family UPF0016 C4J93_RS04690 PF05175 Methyltransferase small domain C4J93_RS04690 PF08468 Methyltransferase small domain N-terminal C4J93_RS04695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J93_RS04695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J93_RS04700 PF01810 LysE type translocator C4J93_RS04705 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS04705 PF00501 AMP-binding enzyme C4J93_RS04715 PF07044 Protein of unknown function (DUF1329) C4J93_RS04720 PF13191 AAA ATPase domain C4J93_RS04720 PF00069 Protein kinase domain C4J93_RS04730 PF02470 MlaD protein C4J93_RS04735 PF04403 Paraquat-inducible protein A C4J93_RS04750 PF00691 OmpA family C4J93_RS04750 PF13488 Glycine zipper C4J93_RS04755 PF04972 BON domain C4J93_RS04760 PF13580 SIS domain C4J93_RS04765 PF02021 Uncharacterised protein family UPF0102 C4J93_RS04770 PF04348 LppC putative lipoprotein C4J93_RS04775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J93_RS04785 PF02381 MraZ protein, putative antitoxin-like C4J93_RS04790 PF01795 MraW methylase family C4J93_RS04795 PF04999 Cell division protein FtsL C4J93_RS04800 PF03717 Penicillin-binding Protein dimerisation domain C4J93_RS04800 PF00905 Penicillin binding protein transpeptidase domain C4J93_RS04805 PF01225 Mur ligase family, catalytic domain C4J93_RS04805 PF02875 Mur ligase family, glutamate ligase domain C4J93_RS04805 PF08245 Mur ligase middle domain C4J93_RS04810 PF01225 Mur ligase family, catalytic domain C4J93_RS04810 PF02875 Mur ligase family, glutamate ligase domain C4J93_RS04810 PF08245 Mur ligase middle domain C4J93_RS04815 PF00953 Glycosyl transferase family 4 C4J93_RS04815 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C4J93_RS04820 PF08245 Mur ligase middle domain C4J93_RS04820 PF02875 Mur ligase family, glutamate ligase domain C4J93_RS04825 PF01098 Cell cycle protein C4J93_RS04830 PF03033 Glycosyltransferase family 28 N-terminal domain C4J93_RS04830 PF04101 Glycosyltransferase family 28 C-terminal domain C4J93_RS04835 PF08245 Mur ligase middle domain C4J93_RS04835 PF02875 Mur ligase family, glutamate ligase domain C4J93_RS04835 PF01225 Mur ligase family, catalytic domain C4J93_RS04840 PF07478 D-ala D-ala ligase C-terminus C4J93_RS04840 PF01820 D-ala D-ala ligase N-terminus C4J93_RS04845 PF08478 POTRA domain, FtsQ-type C4J93_RS04845 PF03799 Cell division protein FtsQ C4J93_RS04850 PF02491 SHS2 domain inserted in FTSA C4J93_RS04855 PF00091 Tubulin/FtsZ family, GTPase domain C4J93_RS04855 PF12327 FtsZ family, C-terminal domain C4J93_RS04860 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C4J93_RS04865 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS04865 PF00360 Phytochrome region C4J93_RS04865 PF01590 GAF domain C4J93_RS04865 PF00563 EAL domain C4J93_RS04870 PF03573 outer membrane porin, OprD family C4J93_RS04875 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS04875 PF00672 HAMP domain C4J93_RS04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS04880 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS04880 PF00072 Response regulator receiver domain C4J93_RS04885 PF00873 AcrB/AcrD/AcrF family C4J93_RS04890 PF13533 Biotin-lipoyl like C4J93_RS04900 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS04915 PF00072 Response regulator receiver domain C4J93_RS04915 PF01584 CheW-like domain C4J93_RS04920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J93_RS04920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J93_RS04925 PF03466 LysR substrate binding domain C4J93_RS04925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS04930 PF02321 Outer membrane efflux protein C4J93_RS04935 PF04632 Fusaric acid resistance protein family C4J93_RS04945 PF00529 HlyD membrane-fusion protein of T1SS C4J93_RS04945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS04955 PF00106 short chain dehydrogenase C4J93_RS04970 PF01050 Mannose-6-phosphate isomerase C4J93_RS04970 PF00483 Nucleotidyl transferase C4J93_RS04975 PF11182 Alginate O-acetyl transferase AlgF C4J93_RS04980 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX C4J93_RS04985 PF03062 MBOAT, membrane-bound O-acyltransferase family C4J93_RS04990 PF05426 Alginate lyase C4J93_RS04995 PF16824 C-terminal carbohydrate-binding module C4J93_RS04995 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX C4J93_RS05000 PF05048 Periplasmic copper-binding protein (NosD) C4J93_RS05005 PF13372 Alginate export C4J93_RS05010 PF08238 Sel1 repeat C4J93_RS05015 PF07238 PilZ domain C4J93_RS05030 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4J93_RS05030 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4J93_RS05030 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4J93_RS05035 PF03883 Peroxide stress protein YaaA C4J93_RS05045 PF13638 PIN domain C4J93_RS05045 PF02562 PhoH-like protein C4J93_RS05055 PF01967 MoaC family C4J93_RS05060 PF02597 ThiS family C4J93_RS05065 PF02391 MoaE protein C4J93_RS05075 PF14220 Domain of unknown function (DUF4329) C4J93_RS05075 PF05593 RHS Repeat C4J93_RS05075 PF03527 RHS protein C4J93_RS05080 PF00271 Helicase conserved C-terminal domain C4J93_RS05080 PF00270 DEAD/DEAH box helicase C4J93_RS05085 PF02230 Phospholipase/Carboxylesterase C4J93_RS05090 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS05105 PF00005 ABC transporter C4J93_RS05115 PF15723 Motility quorum-sensing regulator, toxin of MqsA C4J93_RS05120 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS05120 PF07729 FCD domain C4J93_RS05125 PF07690 Major Facilitator Superfamily C4J93_RS05130 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS05130 PF01627 Hpt domain C4J93_RS05130 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS05130 PF00989 PAS fold C4J93_RS05130 PF00072 Response regulator receiver domain C4J93_RS05135 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS05135 PF00072 Response regulator receiver domain C4J93_RS05145 PF01541 GIY-YIG catalytic domain C4J93_RS05150 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS05155 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C4J93_RS05165 PF04209 homogentisate 1,2-dioxygenase C4J93_RS05170 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4J93_RS05175 PF13417 Glutathione S-transferase, N-terminal domain C4J93_RS05180 PF07690 Major Facilitator Superfamily C4J93_RS05185 PF13369 Transglutaminase-like superfamily C4J93_RS05190 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C4J93_RS05190 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C4J93_RS05200 PF06146 Phosphate-starvation-inducible E C4J93_RS05210 PF03313 Serine dehydratase alpha chain C4J93_RS05210 PF03315 Serine dehydratase beta chain C4J93_RS05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS05215 PF03466 LysR substrate binding domain C4J93_RS05225 PF07690 Major Facilitator Superfamily C4J93_RS05230 PF03466 LysR substrate binding domain C4J93_RS05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS05235 PF00593 TonB dependent receptor C4J93_RS05235 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS05235 PF07660 Secretin and TonB N terminus short domain C4J93_RS05240 PF04773 FecR protein C4J93_RS05240 PF16220 Domain of unknown function (DUF4880) C4J93_RS05245 PF04542 Sigma-70 region 2 C4J93_RS05245 PF08281 Sigma-70, region 4 C4J93_RS05280 PF04245 37-kD nucleoid-associated bacterial protein C4J93_RS05285 PF00216 Bacterial DNA-binding protein C4J93_RS05290 PF05971 RNA methyltransferase C4J93_RS05295 PF10458 Valyl tRNA synthetase tRNA binding arm C4J93_RS05295 PF00133 tRNA synthetases class I (I, L, M and V) C4J93_RS05295 PF08264 Anticodon-binding domain of tRNA C4J93_RS05305 PF04364 DNA polymerase III chi subunit, HolC C4J93_RS05310 PF00883 Cytosol aminopeptidase family, catalytic domain C4J93_RS05310 PF02789 Cytosol aminopeptidase family, N-terminal domain C4J93_RS05315 PF03739 Lipopolysaccharide export system permease LptF/LptG C4J93_RS05320 PF03739 Lipopolysaccharide export system permease LptF/LptG C4J93_RS05325 PF03144 Elongation factor Tu domain 2 C4J93_RS05325 PF00679 Elongation factor G C-terminus C4J93_RS05325 PF00009 Elongation factor Tu GTP binding domain C4J93_RS05325 PF06421 GTP-binding protein LepA C-terminus C4J93_RS05330 PF10502 Signal peptidase, peptidase S26 C4J93_RS05335 PF00035 Double-stranded RNA binding motif C4J93_RS05335 PF14622 Ribonuclease-III-like C4J93_RS05340 PF07650 KH domain C4J93_RS05340 PF01926 50S ribosome-binding GTPase C4J93_RS05345 PF02565 Recombination protein O C terminal C4J93_RS05345 PF11967 Recombination protein O N terminal C4J93_RS05350 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C4J93_RS05355 PF07731 Multicopper oxidase C4J93_RS05355 PF00394 Multicopper oxidase C4J93_RS05355 PF07732 Multicopper oxidase C4J93_RS05360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C4J93_RS05365 PF08003 Protein of unknown function (DUF1698) C4J93_RS05370 PF13649 Methyltransferase domain C4J93_RS05380 PF00004 ATPase family associated with various cellular activities (AAA) C4J93_RS05380 PF05362 Lon protease (S16) C-terminal proteolytic domain C4J93_RS05380 PF02190 ATP-dependent protease La (LON) substrate-binding domain C4J93_RS05390 PF01425 Amidase C4J93_RS05395 PF01522 Polysaccharide deacetylase C4J93_RS05400 PF07690 Major Facilitator Superfamily C4J93_RS05420 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J93_RS05420 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J93_RS05430 PF01011 PQQ enzyme repeat C4J93_RS05440 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS05440 PF00593 TonB dependent receptor C4J93_RS05445 PF09905 DNA-binding protein VF530 C4J93_RS05455 PF08021 Siderophore-interacting FAD-binding domain C4J93_RS05455 PF04954 Siderophore-interacting protein C4J93_RS05460 PF03551 Transcriptional regulator PadR-like family C4J93_RS05500 PF12468 Type III secretion system leucine rich repeat protein C4J93_RS05500 PF14496 C-terminal novel E3 ligase, LRR-interacting C4J93_RS05515 PF00324 Amino acid permease C4J93_RS05525 PF01645 Conserved region in glutamate synthase C4J93_RS05535 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS05535 PF13188 PAS domain C4J93_RS05535 PF08448 PAS fold C4J93_RS05535 PF00072 Response regulator receiver domain C4J93_RS05540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS05545 PF14376 Haem-binding domain C4J93_RS05545 PF00034 Cytochrome c C4J93_RS05545 PF03150 Di-haem cytochrome c peroxidase C4J93_RS05550 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS05550 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS05550 PF00563 EAL domain C4J93_RS05555 PF00072 Response regulator receiver domain C4J93_RS05560 PF00293 NUDIX domain C4J93_RS05580 PF00665 Integrase core domain C4J93_RS05585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS05585 PF03466 LysR substrate binding domain C4J93_RS05590 PF00561 alpha/beta hydrolase fold C4J93_RS05610 PF00892 EamA-like transporter family C4J93_RS05625 PF00202 Aminotransferase class-III C4J93_RS05630 PF12146 Serine aminopeptidase, S33 C4J93_RS05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS05640 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS05645 PF00158 Sigma-54 interaction domain C4J93_RS05645 PF02954 Bacterial regulatory protein, Fis family C4J93_RS05645 PF00072 Response regulator receiver domain C4J93_RS05650 PF06942 GlpM protein C4J93_RS05660 PF02743 Cache domain C4J93_RS05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS05660 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS05665 PF00005 ABC transporter C4J93_RS05670 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS05680 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS05685 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C4J93_RS05685 PF01266 FAD dependent oxidoreductase C4J93_RS05690 PF08220 DeoR-like helix-turn-helix domain C4J93_RS05690 PF00455 DeoR C terminal sensor domain C4J93_RS05695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J93_RS05695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J93_RS05700 PF00230 Major intrinsic protein C4J93_RS05705 PF04073 Aminoacyl-tRNA editing domain C4J93_RS05710 PF08402 TOBE domain C4J93_RS05710 PF00005 ABC transporter C4J93_RS05715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4J93_RS05715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4J93_RS05725 PF00384 Molybdopterin oxidoreductase C4J93_RS05725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4J93_RS05725 PF01568 Molydopterin dinucleotide binding domain C4J93_RS05730 PF00462 Glutaredoxin C4J93_RS05735 PF00210 Ferritin-like domain C4J93_RS05740 PF04324 BFD-like [2Fe-2S] binding domain C4J93_RS05745 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4J93_RS05745 PF00578 AhpC/TSA family C4J93_RS05750 PF00929 Exonuclease C4J93_RS05755 PF01979 Amidohydrolase family C4J93_RS05765 PF00764 Arginosuccinate synthase C4J93_RS05770 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS05770 PF00072 Response regulator receiver domain C4J93_RS05780 PF00633 Helix-hairpin-helix motif C4J93_RS05780 PF10576 Iron-sulfur binding domain of endonuclease III C4J93_RS05780 PF00730 HhH-GPD superfamily base excision DNA repair protein C4J93_RS05785 PF04060 Putative Fe-S cluster C4J93_RS05790 PF09334 tRNA synthetases class I (M) C4J93_RS05790 PF01588 Putative tRNA binding domain C4J93_RS05795 PF10609 NUBPL iron-transfer P-loop NTPase C4J93_RS05800 PF11953 Domain of unknown function (DUF3470) C4J93_RS05800 PF00037 4Fe-4S binding domain C4J93_RS05805 PF05190 MutS family domain IV C4J93_RS05805 PF01624 MutS domain I C4J93_RS05805 PF05188 MutS domain II C4J93_RS05805 PF00488 MutS domain V C4J93_RS05805 PF05192 MutS domain III C4J93_RS05810 PF12167 Arm DNA-binding domain C4J93_RS05810 PF00589 Phage integrase family C4J93_RS05855 PF11112 Pyocin activator protein PrtN C4J93_RS05995 PF17482 Phage tail sheath C-terminal domain C4J93_RS05995 PF04984 Phage tail sheath protein subtilisin-like domain C4J93_RS06030 PF00182 Chitinase class I C4J93_RS06040 PF02086 D12 class N6 adenine-specific DNA methyltransferase C4J93_RS06045 PF02586 SOS response associated peptidase (SRAP) C4J93_RS06050 PF00717 Peptidase S24-like C4J93_RS06055 PF13438 Domain of unknown function (DUF4113) C4J93_RS06055 PF00817 impB/mucB/samB family C4J93_RS06055 PF11799 impB/mucB/samB family C-terminal domain C4J93_RS06075 PF01381 Helix-turn-helix C4J93_RS06075 PF00717 Peptidase S24-like C4J93_RS06080 PF13006 Insertion element 4 transposase N-terminal C4J93_RS06080 PF01609 Transposase DDE domain C4J93_RS06080 PF01609 Transposase DDE domain C4J93_RS06080 PF13006 Insertion element 4 transposase N-terminal C4J93_RS06165 PF00182 Chitinase class I C4J93_RS06175 PF02464 Competence-damaged protein C4J93_RS06180 PF00154 recA bacterial DNA recombination protein C4J93_RS06185 PF02631 RecX family C4J93_RS06200 PF03942 DTW domain C4J93_RS06205 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS06205 PF00072 Response regulator receiver domain C4J93_RS06210 PF01219 Prokaryotic diacylglycerol kinase C4J93_RS06215 PF03466 LysR substrate binding domain C4J93_RS06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS06220 PF00970 Oxidoreductase FAD-binding domain C4J93_RS06220 PF00175 Oxidoreductase NAD-binding domain C4J93_RS06225 PF01980 tRNA-methyltransferase O C4J93_RS06225 PF18389 TrmO C-terminal domain C4J93_RS06230 PF07308 Protein of unknown function (DUF1456) C4J93_RS06240 PF13673 Acetyltransferase (GNAT) domain C4J93_RS06240 PF00117 Glutamine amidotransferase class-I C4J93_RS06240 PF13302 Acetyltransferase (GNAT) domain C4J93_RS06240 PF03352 Methyladenine glycosylase C4J93_RS06240 PF00958 GMP synthase C terminal domain C4J93_RS06245 PF04055 Radical SAM superfamily C4J93_RS06245 PF00919 Uncharacterized protein family UPF0004 C4J93_RS06245 PF18693 TRAM domain C4J93_RS06250 PF02705 K+ potassium transporter C4J93_RS06255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J93_RS06265 PF04349 Periplasmic glucan biosynthesis protein, MdoG C4J93_RS06275 PF12729 Four helix bundle sensory module for signal transduction C4J93_RS06275 PF00672 HAMP domain C4J93_RS06275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS06285 PF01739 CheR methyltransferase, SAM binding domain C4J93_RS06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS06295 PF01584 CheW-like domain C4J93_RS06295 PF00072 Response regulator receiver domain C4J93_RS06295 PF01627 Hpt domain C4J93_RS06300 PF00072 Response regulator receiver domain C4J93_RS06300 PF01339 CheB methylesterase C4J93_RS06305 PF00563 EAL domain C4J93_RS06305 PF01590 GAF domain C4J93_RS06305 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS06305 PF00360 Phytochrome region C4J93_RS06315 PF00152 tRNA synthetases class II (D, K and N) C4J93_RS06315 PF01336 OB-fold nucleic acid binding domain C4J93_RS06330 PF12146 Serine aminopeptidase, S33 C4J93_RS06350 PF00691 OmpA family C4J93_RS06350 PF13488 Glycine zipper C4J93_RS06365 PF00311 Phosphoenolpyruvate carboxylase C4J93_RS06370 PF05191 Adenylate kinase, active site lid C4J93_RS06375 PF00814 Glycoprotease family C4J93_RS06385 PF01904 Protein of unknown function DUF72 C4J93_RS06405 PF04445 Putative SAM-dependent methyltransferase C4J93_RS06415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS06420 PF00873 AcrB/AcrD/AcrF family C4J93_RS06440 PF01553 Acyltransferase C4J93_RS06445 PF00313 'Cold-shock' DNA-binding domain C4J93_RS06455 PF13847 Methyltransferase domain C4J93_RS06460 PF01546 Peptidase family M20/M25/M40 C4J93_RS06460 PF07687 Peptidase dimerisation domain C4J93_RS06465 PF03552 Cellulose synthase C4J93_RS06465 PF07238 PilZ domain C4J93_RS06465 PF00535 Glycosyl transferase family 2 C4J93_RS06470 PF00899 ThiF family C4J93_RS06475 PF02657 Fe-S metabolism associated domain C4J93_RS06480 PF00266 Aminotransferase class-V C4J93_RS06485 PF14602 Hexapeptide repeat of succinyl-transferase C4J93_RS06485 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle C4J93_RS06490 PF03960 ArsC family C4J93_RS06495 PF00589 Phage integrase family C4J93_RS06495 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain C4J93_RS06595 PF01381 Helix-turn-helix C4J93_RS06595 PF00717 Peptidase S24-like C4J93_RS06695 PF03354 Phage Terminase C4J93_RS06805 PF07486 Cell Wall Hydrolase C4J93_RS06805 PF01471 Putative peptidoglycan binding domain C4J93_RS06820 PF00999 Sodium/hydrogen exchanger family C4J93_RS06830 PF00155 Aminotransferase class I and II C4J93_RS06840 PF00557 Metallopeptidase family M24 C4J93_RS06845 PF00318 Ribosomal protein S2 C4J93_RS06850 PF00889 Elongation factor TS C4J93_RS06855 PF00696 Amino acid kinase family C4J93_RS06860 PF01765 Ribosome recycling factor C4J93_RS06865 PF01255 Putative undecaprenyl diphosphate synthase C4J93_RS06875 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C4J93_RS06875 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C4J93_RS06875 PF13288 DXP reductoisomerase C-terminal domain C4J93_RS06880 PF02163 Peptidase family M50 C4J93_RS06880 PF17820 PDZ domain C4J93_RS06880 PF13180 PDZ domain C4J93_RS06885 PF07244 Surface antigen variable number repeat C4J93_RS06885 PF01103 Surface antigen C4J93_RS06890 PF03938 Outer membrane protein (OmpH-like) C4J93_RS06895 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS06895 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C4J93_RS06900 PF07977 FabA-like domain C4J93_RS06905 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C4J93_RS06905 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS06910 PF02684 Lipid-A-disaccharide synthetase C4J93_RS06915 PF01351 Ribonuclease HII C4J93_RS06920 PF02811 PHP domain C4J93_RS06920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C4J93_RS06920 PF07733 Bacterial DNA polymerase III alpha NTPase domain C4J93_RS06920 PF01336 OB-fold nucleic acid binding domain C4J93_RS06920 PF14579 Helix-hairpin-helix motif C4J93_RS06925 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C4J93_RS06930 PF09179 TilS substrate binding domain C4J93_RS06930 PF01171 PP-loop family C4J93_RS06930 PF11734 TilS substrate C-terminal domain C4J93_RS06935 PF00117 Glutamine amidotransferase class-I C4J93_RS06935 PF06418 CTP synthase N-terminus C4J93_RS06940 PF00793 DAHP synthetase I family C4J93_RS06945 PF00113 Enolase, C-terminal TIM barrel domain C4J93_RS06945 PF03952 Enolase, N-terminal domain C4J93_RS06950 PF04977 Septum formation initiator C4J93_RS06955 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C4J93_RS06960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS06960 PF03466 LysR substrate binding domain C4J93_RS06965 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS06965 PF00107 Zinc-binding dehydrogenase C4J93_RS06970 PF00756 Putative esterase C4J93_RS06975 PF02542 YgbB family C4J93_RS06985 PF01975 Survival protein SurE C4J93_RS06995 PF01551 Peptidase family M23 C4J93_RS06995 PF01476 LysM domain C4J93_RS07000 PF04545 Sigma-70, region 4 C4J93_RS07000 PF04542 Sigma-70 region 2 C4J93_RS07000 PF04539 Sigma-70 region 3 C4J93_RS07000 PF00140 Sigma-70 factor, region 1.2 C4J93_RS07005 PF00313 'Cold-shock' DNA-binding domain C4J93_RS07010 PF00692 dUTPase C4J93_RS07025 PF08494 DEAD/H associated C4J93_RS07025 PF00270 DEAD/DEAH box helicase C4J93_RS07025 PF00271 Helicase conserved C-terminal domain C4J93_RS07030 PF00005 ABC transporter C4J93_RS07040 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS07045 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS07050 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS07055 PF01068 ATP dependent DNA ligase domain C4J93_RS07055 PF04675 DNA ligase N terminus C4J93_RS07055 PF04679 ATP dependent DNA ligase C terminal region C4J93_RS07075 PF07516 SecA Wing and Scaffold domain C4J93_RS07075 PF01043 SecA preprotein cross-linking domain C4J93_RS07075 PF07517 SecA DEAD-like domain C4J93_RS07075 PF02810 SEC-C motif C4J93_RS07085 PF02810 SEC-C motif C4J93_RS07105 PF13307 Helicase C-terminal domain C4J93_RS07105 PF06733 DEAD_2 C4J93_RS07110 PF17992 Agarase CBM like domain C4J93_RS07110 PF02449 Beta-galactosidase C4J93_RS07115 PF00144 Beta-lactamase C4J93_RS07120 PF00691 OmpA family C4J93_RS07120 PF04972 BON domain C4J93_RS07125 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C4J93_RS07125 PF01243 Pyridoxamine 5'-phosphate oxidase C4J93_RS07135 PF06965 Na+/H+ antiporter 1 C4J93_RS07160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS07160 PF03466 LysR substrate binding domain C4J93_RS07175 PF05114 Protein of unknown function (DUF692) C4J93_RS07185 PF00005 ABC transporter C4J93_RS07190 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J93_RS07190 PF00005 ABC transporter C4J93_RS07195 PF11862 Domain of unknown function (DUF3382) C4J93_RS07195 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS07200 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS07205 PF13458 Periplasmic binding protein C4J93_RS07220 PF00563 EAL domain C4J93_RS07220 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS07220 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS07225 PF03692 Putative zinc- or iron-chelating domain C4J93_RS07235 PF07690 Major Facilitator Superfamily C4J93_RS07240 PF18339 RapA N-terminal Tudor like domain 1 C4J93_RS07240 PF00271 Helicase conserved C-terminal domain C4J93_RS07240 PF00176 SNF2 family N-terminal domain C4J93_RS07240 PF12137 RNA polymerase recycling family C-terminal C4J93_RS07240 PF18337 RapA N-terminal Tudor like domain C4J93_RS07255 PF01384 Phosphate transporter family C4J93_RS07265 PF01614 Bacterial transcriptional regulator C4J93_RS07265 PF09339 IclR helix-turn-helix domain C4J93_RS07270 PF07690 Major Facilitator Superfamily C4J93_RS07280 PF01144 Coenzyme A transferase C4J93_RS07285 PF01144 Coenzyme A transferase C4J93_RS07290 PF02803 Thiolase, C-terminal domain C4J93_RS07290 PF00108 Thiolase, N-terminal domain C4J93_RS07295 PF00775 Dioxygenase C4J93_RS07295 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C4J93_RS07300 PF00775 Dioxygenase C4J93_RS07305 PF00083 Sugar (and other) transporter C4J93_RS07310 PF10397 Adenylosuccinate lyase C-terminus C4J93_RS07310 PF00206 Lyase C4J93_RS07315 PF12146 Serine aminopeptidase, S33 C4J93_RS07320 PF02627 Carboxymuconolactone decarboxylase family C4J93_RS07330 PF03573 outer membrane porin, OprD family C4J93_RS07335 PF02321 Outer membrane efflux protein C4J93_RS07340 PF00873 AcrB/AcrD/AcrF family C4J93_RS07345 PF00529 HlyD membrane-fusion protein of T1SS C4J93_RS07345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS07350 PF08361 MAATS-type transcriptional repressor, C-terminal region C4J93_RS07350 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS07355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J93_RS07395 PF13091 PLD-like domain C4J93_RS07395 PF13396 Phospholipase_D-nuclease N-terminal C4J93_RS07400 PF03797 Autotransporter beta-domain C4J93_RS07400 PF12951 Passenger-associated-transport-repeat C4J93_RS07400 PF00082 Subtilase family C4J93_RS07405 PF00933 Glycosyl hydrolase family 3 N terminal domain C4J93_RS07405 PF01915 Glycosyl hydrolase family 3 C-terminal domain C4J93_RS07405 PF14310 Fibronectin type III-like domain C4J93_RS07440 PF00465 Iron-containing alcohol dehydrogenase C4J93_RS07450 PF02515 CoA-transferase family III C4J93_RS07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS07460 PF03466 LysR substrate binding domain C4J93_RS07475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J93_RS07500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C4J93_RS07500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C4J93_RS07515 PF00561 alpha/beta hydrolase fold C4J93_RS07520 PF00849 RNA pseudouridylate synthase C4J93_RS07520 PF01479 S4 domain C4J93_RS07545 PF03167 Uracil DNA glycosylase superfamily C4J93_RS07555 PF01970 Tripartite tricarboxylate transporter TctA family C4J93_RS07570 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS07570 PF00072 Response regulator receiver domain C4J93_RS07575 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS07575 PF08521 Two-component sensor kinase N-terminal C4J93_RS07585 PF01571 Aminomethyltransferase folate-binding domain C4J93_RS07590 PF03937 Flavinator of succinate dehydrogenase C4J93_RS07600 PF02910 Fumarate reductase flavoprotein C-term C4J93_RS07600 PF00890 FAD binding domain C4J93_RS07605 PF04542 Sigma-70 region 2 C4J93_RS07605 PF08281 Sigma-70, region 4 C4J93_RS07610 PF03873 Anti sigma-E protein RseA, C-terminal domain C4J93_RS07610 PF03872 Anti sigma-E protein RseA, N-terminal domain C4J93_RS07615 PF03888 MucB/RseB N-terminal domain C4J93_RS07615 PF17188 MucB/RseB C-terminal domain C4J93_RS07620 PF13180 PDZ domain C4J93_RS07625 PF01435 Peptidase family M48 C4J93_RS07630 PF01206 Sulfurtransferase TusA C4J93_RS07635 PF00578 AhpC/TSA family C4J93_RS07645 PF00701 Dihydrodipicolinate synthetase family C4J93_RS07650 PF06804 NlpB/DapX lipoprotein C4J93_RS07655 PF00753 Metallo-beta-lactamase superfamily C4J93_RS07660 PF01259 SAICAR synthetase C4J93_RS07685 PF07690 Major Facilitator Superfamily C4J93_RS07700 PF03466 LysR substrate binding domain C4J93_RS07700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS07710 PF07690 Major Facilitator Superfamily C4J93_RS07715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS07715 PF03466 LysR substrate binding domain C4J93_RS07720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS07720 PF03466 LysR substrate binding domain C4J93_RS07725 PF07690 Major Facilitator Superfamily C4J93_RS07730 PF13460 NAD(P)H-binding C4J93_RS07740 PF03466 LysR substrate binding domain C4J93_RS07740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS07750 PF01494 FAD binding domain C4J93_RS07770 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS07780 PF01612 3'-5' exonuclease C4J93_RS07780 PF00570 HRDC domain C4J93_RS07785 PF05166 YcgL domain C4J93_RS07790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J93_RS07800 PF03692 Putative zinc- or iron-chelating domain C4J93_RS07820 PF01844 HNH endonuclease C4J93_RS07840 PF00326 Prolyl oligopeptidase family C4J93_RS07840 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C4J93_RS07850 PF13230 Glutamine amidotransferases class-II C4J93_RS07860 PF03466 LysR substrate binding domain C4J93_RS07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS07865 PF03746 LamB/YcsF family C4J93_RS07870 PF02682 Carboxyltransferase domain, subdomain C and D C4J93_RS07875 PF02626 Carboxyltransferase domain, subdomain A and B C4J93_RS07885 PF00004 ATPase family associated with various cellular activities (AAA) C4J93_RS07885 PF10431 C-terminal, D2-small domain, of ClpB protein C4J93_RS07885 PF02861 Clp amino terminal domain, pathogenicity island component C4J93_RS07885 PF07724 AAA domain (Cdc48 subfamily) C4J93_RS07885 PF17871 AAA lid domain C4J93_RS07895 PF00291 Pyridoxal-phosphate dependent enzyme C4J93_RS07905 PF00694 Aconitase C-terminal domain C4J93_RS07905 PF00330 Aconitase family (aconitate hydratase) C4J93_RS07910 PF01728 FtsJ-like methyltransferase C4J93_RS07910 PF18125 RlmM ferredoxin-like domain C4J93_RS07915 PF01206 Sulfurtransferase TusA C4J93_RS07920 PF01554 MatE C4J93_RS07925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J93_RS07925 PF11890 Domain of unknown function (DUF3410) C4J93_RS07925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J93_RS07930 PF00005 ABC transporter C4J93_RS07930 PF00664 ABC transporter transmembrane region C4J93_RS07935 PF14718 Soluble lytic murein transglycosylase L domain C4J93_RS07935 PF01464 Transglycosylase SLT domain C4J93_RS07940 PF12848 ABC transporter C4J93_RS07940 PF16326 ABC transporter C-terminal domain C4J93_RS07940 PF00005 ABC transporter C4J93_RS07945 PF00582 Universal stress protein family C4J93_RS07955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J93_RS07955 PF00378 Enoyl-CoA hydratase/isomerase C4J93_RS07955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J93_RS07960 PF00108 Thiolase, N-terminal domain C4J93_RS07960 PF02803 Thiolase, C-terminal domain C4J93_RS07970 PF01396 Topoisomerase DNA binding C4 zinc finger C4J93_RS07970 PF01751 Toprim domain C4J93_RS07970 PF01131 DNA topoisomerase C4J93_RS07970 PF08272 Topoisomerase I zinc-ribbon-like C4J93_RS07985 PF03846 Cell division inhibitor SulA C4J93_RS07990 PF00717 Peptidase S24-like C4J93_RS07990 PF01726 LexA DNA binding domain C4J93_RS07995 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS08000 PF00933 Glycosyl hydrolase family 3 N terminal domain C4J93_RS08010 PF00176 SNF2 family N-terminal domain C4J93_RS08010 PF00271 Helicase conserved C-terminal domain C4J93_RS08010 PF12419 SNF2 Helicase protein C4J93_RS08020 PF02559 CarD-like/TRCF domain C4J93_RS08020 PF00270 DEAD/DEAH box helicase C4J93_RS08020 PF03461 TRCF domain C4J93_RS08020 PF17757 UvrB interaction domain C4J93_RS08020 PF00271 Helicase conserved C-terminal domain C4J93_RS08025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4J93_RS08025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4J93_RS08030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J93_RS08030 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS08035 PF03009 Glycerophosphoryl diester phosphodiesterase family C4J93_RS08045 PF12704 MacB-like periplasmic core domain C4J93_RS08045 PF02687 FtsX-like permease family C4J93_RS08050 PF00005 ABC transporter C4J93_RS08055 PF02687 FtsX-like permease family C4J93_RS08055 PF12704 MacB-like periplasmic core domain C4J93_RS08060 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS08060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS08060 PF00672 HAMP domain C4J93_RS08065 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS08065 PF00072 Response regulator receiver domain C4J93_RS08075 PF14489 QueF-like protein C4J93_RS08075 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C4J93_RS08090 PF04333 MlaA lipoprotein C4J93_RS08105 PF02954 Bacterial regulatory protein, Fis family C4J93_RS08105 PF00072 Response regulator receiver domain C4J93_RS08105 PF00158 Sigma-54 interaction domain C4J93_RS08120 PF00923 Transaldolase/Fructose-6-phosphate aldolase C4J93_RS08125 PF01207 Dihydrouridine synthase (Dus) C4J93_RS08155 PF06958 S-type Pyocin C4J93_RS08160 PF09204 Bacterial self-protective colicin-like immunity C4J93_RS08180 PF07690 Major Facilitator Superfamily C4J93_RS08185 PF06039 Malate:quinone oxidoreductase (Mqo) C4J93_RS08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS08190 PF03466 LysR substrate binding domain C4J93_RS08215 PF03641 Possible lysine decarboxylase C4J93_RS08215 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C4J93_RS08215 PF11892 Domain of unknown function (DUF3412) C4J93_RS08225 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C4J93_RS08225 PF07055 Enoyl reductase FAD binding domain C4J93_RS08225 PF12241 Trans-2-enoyl-CoA reductase catalytic region C4J93_RS08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS08240 PF03466 LysR substrate binding domain C4J93_RS08245 PF00202 Aminotransferase class-III C4J93_RS08250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS08250 PF03466 LysR substrate binding domain C4J93_RS08255 PF07690 Major Facilitator Superfamily C4J93_RS08265 PF00860 Permease family C4J93_RS08270 PF00561 alpha/beta hydrolase fold C4J93_RS08275 PF03472 Autoinducer binding domain C4J93_RS08275 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS08280 PF00561 alpha/beta hydrolase fold C4J93_RS08285 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS08290 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J93_RS08290 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS08295 PF00005 ABC transporter C4J93_RS08295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J93_RS08300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J93_RS08300 PF00005 ABC transporter C4J93_RS08305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J93_RS08310 PF00106 short chain dehydrogenase C4J93_RS08315 PF13419 Haloacid dehalogenase-like hydrolase C4J93_RS08325 PF01979 Amidohydrolase family C4J93_RS08330 PF01008 Initiation factor 2 subunit family C4J93_RS08335 PF00521 DNA gyrase/topoisomerase IV, subunit A C4J93_RS08335 PF03989 DNA gyrase C-terminal domain, beta-propeller C4J93_RS08340 PF00266 Aminotransferase class-V C4J93_RS08345 PF01842 ACT domain C4J93_RS08345 PF01817 Chorismate mutase type II C4J93_RS08345 PF00800 Prephenate dehydratase C4J93_RS08350 PF00155 Aminotransferase class I and II C4J93_RS08355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4J93_RS08360 PF02224 Cytidylate kinase C4J93_RS08365 PF00575 S1 RNA binding domain C4J93_RS08375 PF00216 Bacterial DNA-binding protein C4J93_RS08400 PF00535 Glycosyl transferase family 2 C4J93_RS08415 PF01370 NAD dependent epimerase/dehydratase family C4J93_RS08465 PF03814 Potassium-transporting ATPase A subunit C4J93_RS08475 PF02669 K+-transporting ATPase, c chain C4J93_RS08480 PF02702 Osmosensitive K+ channel His kinase sensor domain C4J93_RS08480 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS08480 PF13492 GAF domain C4J93_RS08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS08480 PF13493 Domain of unknown function (DUF4118) C4J93_RS08485 PF00072 Response regulator receiver domain C4J93_RS08485 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS08490 PF01734 Patatin-like phospholipase C4J93_RS08525 PF05593 RHS Repeat C4J93_RS08525 PF03527 RHS protein C4J93_RS08530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS08530 PF00672 HAMP domain C4J93_RS08530 PF12729 Four helix bundle sensory module for signal transduction C4J93_RS08535 PF01026 TatD related DNase C4J93_RS08540 PF01464 Transglycosylase SLT domain C4J93_RS08540 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS08565 PF00005 ABC transporter C4J93_RS08575 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J93_RS08575 PF03449 Transcription elongation factor, N-terminal C4J93_RS08585 PF00005 ABC transporter C4J93_RS08590 PF13472 GDSL-like Lipase/Acylhydrolase family C4J93_RS08600 PF17969 L,D-transpeptidase C-terminal domain C4J93_RS08600 PF03734 L,D-transpeptidase catalytic domain C4J93_RS08605 PF11839 Alanine-zipper, major outer membrane lipoprotein C4J93_RS08615 PF00793 DAHP synthetase I family C4J93_RS08630 PF02558 Ketopantoate reductase PanE/ApbA C4J93_RS08630 PF08546 Ketopantoate reductase PanE/ApbA C terminal C4J93_RS08645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS08645 PF03466 LysR substrate binding domain C4J93_RS08650 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J93_RS08650 PF03449 Transcription elongation factor, N-terminal C4J93_RS08665 PF08207 Elongation factor P (EF-P) KOW-like domain C4J93_RS08665 PF01132 Elongation factor P (EF-P) OB domain C4J93_RS08665 PF09285 Elongation factor P, C-terminal C4J93_RS08670 PF07859 alpha/beta hydrolase fold C4J93_RS08675 PF02566 OsmC-like protein C4J93_RS08680 PF01047 MarR family C4J93_RS08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS08685 PF03466 LysR substrate binding domain C4J93_RS08695 PF03466 LysR substrate binding domain C4J93_RS08695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS08705 PF06224 Winged helix DNA-binding domain C4J93_RS08710 PF01474 Class-II DAHP synthetase family C4J93_RS08730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J93_RS08730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J93_RS08730 PF00378 Enoyl-CoA hydratase/isomerase C4J93_RS08740 PF00270 DEAD/DEAH box helicase C4J93_RS08740 PF03880 DbpA RNA binding domain C4J93_RS08740 PF00271 Helicase conserved C-terminal domain C4J93_RS08745 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C4J93_RS08750 PF05724 Thiopurine S-methyltransferase (TPMT) C4J93_RS08755 PF01435 Peptidase family M48 C4J93_RS08760 PF00155 Aminotransferase class I and II C4J93_RS08765 PF01641 SelR domain C4J93_RS08770 PF00255 Glutathione peroxidase C4J93_RS08775 PF00672 HAMP domain C4J93_RS08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS08775 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS08775 PF01627 Hpt domain C4J93_RS08775 PF00072 Response regulator receiver domain C4J93_RS08775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J93_RS08785 PF13185 GAF domain C4J93_RS08790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS08790 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS08790 PF00989 PAS fold C4J93_RS08790 PF00072 Response regulator receiver domain C4J93_RS08790 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS08790 PF01627 Hpt domain C4J93_RS08795 PF00072 Response regulator receiver domain C4J93_RS08795 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS08805 PF01966 HD domain C4J93_RS08825 PF00909 Ammonium Transporter Family C4J93_RS08840 PF00849 RNA pseudouridylate synthase C4J93_RS08850 PF12804 MobA-like NTP transferase domain C4J93_RS08855 PF00994 Probable molybdopterin binding domain C4J93_RS08860 PF03453 MoeA N-terminal region (domain I and II) C4J93_RS08860 PF03454 MoeA C-terminal region (domain IV) C4J93_RS08860 PF00994 Probable molybdopterin binding domain C4J93_RS08875 PF05532 CsbD-like C4J93_RS08880 PF01312 FlhB HrpN YscU SpaS Family C4J93_RS08890 PF00005 ABC transporter C4J93_RS08895 PF03379 CcmB protein C4J93_RS08900 PF01578 Cytochrome C assembly protein C4J93_RS08905 PF04995 Heme exporter protein D (CcmD) C4J93_RS08910 PF03100 CcmE C4J93_RS08915 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C4J93_RS08915 PF01578 Cytochrome C assembly protein C4J93_RS08920 PF08534 Redoxin C4J93_RS08925 PF03918 Cytochrome C biogenesis protein C4J93_RS08955 PF07690 Major Facilitator Superfamily C4J93_RS08965 PF00027 Cyclic nucleotide-binding domain C4J93_RS08965 PF00520 Ion transport protein C4J93_RS08975 PF00224 Pyruvate kinase, barrel domain C4J93_RS08975 PF02887 Pyruvate kinase, alpha/beta domain C4J93_RS08980 PF13660 Domain of unknown function (DUF4147) C4J93_RS08980 PF05161 MOFRL family C4J93_RS08985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4J93_RS08985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C4J93_RS08990 PF01261 Xylose isomerase-like TIM barrel C4J93_RS08995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J93_RS08995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J93_RS08995 PF00205 Thiamine pyrophosphate enzyme, central domain C4J93_RS09005 PF08362 YcdC-like protein, C-terminal region C4J93_RS09005 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS09010 PF05661 Protein of unknown function (DUF808) C4J93_RS09015 PF04333 MlaA lipoprotein C4J93_RS09035 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J93_RS09040 PF04341 Protein of unknown function, DUF485 C4J93_RS09045 PF00474 Sodium:solute symporter family C4J93_RS09050 PF00285 Citrate synthase, C-terminal domain C4J93_RS09055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C4J93_RS09060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C4J93_RS09065 PF00890 FAD binding domain C4J93_RS09065 PF02910 Fumarate reductase flavoprotein C-term C4J93_RS09070 PF13085 2Fe-2S iron-sulfur cluster binding domain C4J93_RS09075 PF00676 Dehydrogenase E1 component C4J93_RS09075 PF16870 2-oxoglutarate dehydrogenase C-terminal C4J93_RS09075 PF02779 Transketolase, pyrimidine binding domain C4J93_RS09075 PF16078 2-oxoglutarate dehydrogenase N-terminus C4J93_RS09080 PF02817 e3 binding domain C4J93_RS09080 PF00364 Biotin-requiring enzyme C4J93_RS09080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4J93_RS09085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J93_RS09085 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS09090 PF08442 ATP-grasp domain C4J93_RS09090 PF00549 CoA-ligase C4J93_RS09095 PF02629 CoA binding domain C4J93_RS09095 PF00549 CoA-ligase C4J93_RS09100 PF05525 Branched-chain amino acid transport protein C4J93_RS09125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS09125 PF00183 Hsp90 protein C4J93_RS09135 PF05726 Pirin C-terminal cupin domain C4J93_RS09135 PF02678 Pirin C4J93_RS09155 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J93_RS09155 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J93_RS09160 PF07977 FabA-like domain C4J93_RS09165 PF00672 HAMP domain C4J93_RS09165 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS09165 PF01627 Hpt domain C4J93_RS09165 PF00072 Response regulator receiver domain C4J93_RS09165 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J93_RS09165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS09175 PF00593 TonB dependent receptor C4J93_RS09175 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS09180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C4J93_RS09180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C4J93_RS09195 PF03061 Thioesterase superfamily C4J93_RS09205 PF12697 Alpha/beta hydrolase family C4J93_RS09215 PF01594 AI-2E family transporter C4J93_RS09220 PF00672 HAMP domain C4J93_RS09220 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS09220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS09225 PF00072 Response regulator receiver domain C4J93_RS09225 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS09230 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C4J93_RS09235 PF16884 N-terminal domain of oxidoreductase C4J93_RS09235 PF00107 Zinc-binding dehydrogenase C4J93_RS09245 PF00155 Aminotransferase class I and II C4J93_RS09245 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS09250 PF00672 HAMP domain C4J93_RS09250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS09250 PF16591 Helical bimodular sensor domain C4J93_RS09255 PF12146 Serine aminopeptidase, S33 C4J93_RS09285 PF00155 Aminotransferase class I and II C4J93_RS09285 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS09305 PF02272 DHHA1 domain C4J93_RS09305 PF01411 tRNA synthetases class II (A) C4J93_RS09305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J93_RS09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS09310 PF03466 LysR substrate binding domain C4J93_RS09320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS09320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS09320 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS09320 PF09317 Domain of unknown function (DUF1974) C4J93_RS09330 PF13417 Glutathione S-transferase, N-terminal domain C4J93_RS09330 PF00043 Glutathione S-transferase, C-terminal domain C4J93_RS09335 PF00005 ABC transporter C4J93_RS09340 PF01061 ABC-2 type transporter C4J93_RS09360 PF07690 Major Facilitator Superfamily C4J93_RS09365 PF00893 Small Multidrug Resistance protein C4J93_RS09370 PF01758 Sodium Bile acid symporter family C4J93_RS09375 PF04381 Putative exonuclease, RdgC C4J93_RS09405 PF00682 HMGL-like C4J93_RS09410 PF02515 CoA-transferase family III C4J93_RS09415 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS09420 PF07690 Major Facilitator Superfamily C4J93_RS09440 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J93_RS09440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J93_RS09460 PF17153 Periplasmic sensor domain, extracellular C4J93_RS09460 PF00563 EAL domain C4J93_RS09465 PF17804 Tail specific protease N-terminal domain C4J93_RS09465 PF03572 Peptidase family S41 C4J93_RS09465 PF00595 PDZ domain C4J93_RS09465 PF11818 C-terminal domain of tail specific protease (DUF3340) C4J93_RS09475 PF00005 ABC transporter C4J93_RS09475 PF08402 TOBE domain C4J93_RS09500 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS09500 PF07702 UTRA domain C4J93_RS09510 PF00950 ABC 3 transport family C4J93_RS09515 PF00005 ABC transporter C4J93_RS09545 PF12544 Lysine-2,3-aminomutase C4J93_RS09545 PF04055 Radical SAM superfamily C4J93_RS09550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J93_RS09550 PF18603 L-amino acid ligase C-terminal domain 2 C4J93_RS09565 PF09278 MerR, DNA binding C4J93_RS09565 PF00376 MerR family regulatory protein C4J93_RS09575 PF00158 Sigma-54 interaction domain C4J93_RS09585 PF00266 Aminotransferase class-V C4J93_RS09590 PF01321 Creatinase/Prolidase N-terminal domain C4J93_RS09590 PF00557 Metallopeptidase family M24 C4J93_RS09600 PF00892 EamA-like transporter family C4J93_RS09635 PF00905 Penicillin binding protein transpeptidase domain C4J93_RS09635 PF03717 Penicillin-binding Protein dimerisation domain C4J93_RS09650 PF00593 TonB dependent receptor C4J93_RS09650 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS09655 PF03104 DNA polymerase family B, exonuclease domain C4J93_RS09655 PF00136 DNA polymerase family B C4J93_RS09675 PF03023 Lipid II flippase MurJ C4J93_RS09695 PF01229 Glycosyl hydrolases family 39 C4J93_RS09710 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C4J93_RS09710 PF02563 Polysaccharide biosynthesis/export protein C4J93_RS09710 PF10531 SLBB domain C4J93_RS09715 PF00535 Glycosyl transferase family 2 C4J93_RS09720 PF00483 Nucleotidyl transferase C4J93_RS09720 PF01050 Mannose-6-phosphate isomerase C4J93_RS09725 PF02397 Bacterial sugar transferase C4J93_RS09730 PF01965 DJ-1/PfpI family C4J93_RS09735 PF01965 DJ-1/PfpI family C4J93_RS09735 PF12833 Helix-turn-helix domain C4J93_RS09740 PF00561 alpha/beta hydrolase fold C4J93_RS09745 PF00723 Glycosyl hydrolases family 15 C4J93_RS09770 PF07690 Major Facilitator Superfamily C4J93_RS09775 PF04717 Type VI secretion system, phage-baseplate injector C4J93_RS09790 PF01764 Lipase (class 3) C4J93_RS09795 PF07969 Amidohydrolase family C4J93_RS09800 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J93_RS09805 PF01242 6-pyruvoyl tetrahydropterin synthase C4J93_RS09825 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS09825 PF00072 Response regulator receiver domain C4J93_RS09830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS09840 PF00672 HAMP domain C4J93_RS09840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS09845 PF13726 Na+-H+ antiporter family C4J93_RS09845 PF03553 Na+/H+ antiporter family C4J93_RS09850 PF17200 Single Cache domain 2 C4J93_RS09850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS09850 PF00672 HAMP domain C4J93_RS09855 PF16325 Peptidase family U32 C-terminal domain C4J93_RS09855 PF01136 Peptidase family U32 C4J93_RS09860 PF01594 AI-2E family transporter C4J93_RS09875 PF08501 Shikimate dehydrogenase substrate binding domain C4J93_RS09880 PF04337 Protein of unknown function, DUF480 C4J93_RS09890 PF00375 Sodium:dicarboxylate symporter family C4J93_RS09895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS09895 PF03466 LysR substrate binding domain C4J93_RS09905 PF03471 Transporter associated domain C4J93_RS09905 PF03741 Integral membrane protein TerC family C4J93_RS09910 PF00586 AIR synthase related protein, N-terminal domain C4J93_RS09910 PF02769 AIR synthase related protein, C-terminal domain C4J93_RS09920 PF03773 Predicted permease C4J93_RS09930 PF02798 Glutathione S-transferase, N-terminal domain C4J93_RS09930 PF00043 Glutathione S-transferase, C-terminal domain C4J93_RS09935 PF02567 Phenazine biosynthesis-like protein C4J93_RS09940 PF00490 Delta-aminolevulinic acid dehydratase C4J93_RS09970 PF03527 RHS protein C4J93_RS09970 PF05593 RHS Repeat C4J93_RS09975 PF07759 Protein of unknown function (DUF1615) C4J93_RS09980 PF02803 Thiolase, C-terminal domain C4J93_RS09980 PF00108 Thiolase, N-terminal domain C4J93_RS09985 PF01144 Coenzyme A transferase C4J93_RS09990 PF01144 Coenzyme A transferase C4J93_RS09995 PF03466 LysR substrate binding domain C4J93_RS09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS10005 PF02146 Sir2 family C4J93_RS10010 PF00571 CBS domain C4J93_RS10015 PF01751 Toprim domain C4J93_RS10015 PF01131 DNA topoisomerase C4J93_RS10020 PF08946 Osmosensory transporter coiled coil C4J93_RS10020 PF00083 Sugar (and other) transporter C4J93_RS10025 PF00732 GMC oxidoreductase C4J93_RS10025 PF05199 GMC oxidoreductase C4J93_RS10035 PF00120 Glutamine synthetase, catalytic domain C4J93_RS10060 PF07690 Major Facilitator Superfamily C4J93_RS10070 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS10070 PF00072 Response regulator receiver domain C4J93_RS10080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J93_RS10080 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J93_RS10090 PF00690 Cation transporter/ATPase, N-terminus C4J93_RS10090 PF00689 Cation transporting ATPase, C-terminus C4J93_RS10095 PF02308 MgtC family C4J93_RS10100 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS10100 PF00072 Response regulator receiver domain C4J93_RS10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS10105 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS10105 PF01627 Hpt domain C4J93_RS10105 PF00989 PAS fold C4J93_RS10105 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS10105 PF00072 Response regulator receiver domain C4J93_RS10115 PF00793 DAHP synthetase I family C4J93_RS10120 PF00795 Carbon-nitrogen hydrolase C4J93_RS10135 PF00072 Response regulator receiver domain C4J93_RS10135 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS10140 PF08459 UvrC Helix-hairpin-helix N-terminal C4J93_RS10140 PF01541 GIY-YIG catalytic domain C4J93_RS10140 PF02151 UvrB/uvrC motif C4J93_RS10145 PF01066 CDP-alcohol phosphatidyltransferase C4J93_RS10155 PF14659 Phage integrase, N-terminal SAM-like domain C4J93_RS10155 PF00589 Phage integrase family C4J93_RS10155 PF13356 Arm DNA-binding domain C4J93_RS10185 PF08401 Domain of unknown function (DUF1738) C4J93_RS10185 PF18818 Metallopeptidase superfamily domain C4J93_RS10185 PF13362 Toprim domain C4J93_RS10220 PF01381 Helix-turn-helix C4J93_RS10345 PF04002 RadC-like JAB domain C4J93_RS10360 PF01381 Helix-turn-helix C4J93_RS10370 PF01131 DNA topoisomerase C4J93_RS10370 PF01751 Toprim domain C4J93_RS10410 PF13614 AAA domain C4J93_RS10425 PF01292 Prokaryotic cytochrome b561 C4J93_RS10430 PF00171 Aldehyde dehydrogenase family C4J93_RS10435 PF00202 Aminotransferase class-III C4J93_RS10445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS10445 PF00672 HAMP domain C4J93_RS10450 PF07690 Major Facilitator Superfamily C4J93_RS10460 PF00171 Aldehyde dehydrogenase family C4J93_RS10475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J93_RS10475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J93_RS10480 PF00171 Aldehyde dehydrogenase family C4J93_RS10485 PF00106 short chain dehydrogenase C4J93_RS10505 PF01494 FAD binding domain C4J93_RS10510 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4J93_RS10515 PF12833 Helix-turn-helix domain C4J93_RS10535 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS10535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS10535 PF00672 HAMP domain C4J93_RS10540 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS10540 PF00072 Response regulator receiver domain C4J93_RS10560 PF01266 FAD dependent oxidoreductase C4J93_RS10570 PF07690 Major Facilitator Superfamily C4J93_RS10580 PF03737 Aldolase/RraA C4J93_RS10585 PF07690 Major Facilitator Superfamily C4J93_RS10610 PF13614 AAA domain C4J93_RS10640 PF12833 Helix-turn-helix domain C4J93_RS10645 PF00263 Bacterial type II and III secretion system protein C4J93_RS10645 PF03958 Bacterial type II/III secretion system short domain C4J93_RS10650 PF07201 HrpJ-like domain C4J93_RS10655 PF00771 FHIPEP family C4J93_RS10680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J93_RS10685 PF00813 FliP family C4J93_RS10690 PF01313 Bacterial export proteins, family 3 C4J93_RS10700 PF01312 FlhB HrpN YscU SpaS Family C4J93_RS10705 PF07720 Tetratricopeptide repeat C4J93_RS10710 PF04888 Secretion system effector C (SseC) like family C4J93_RS10710 PF16535 Type III cell invasion protein SipB C4J93_RS10720 PF06511 Type III secretion systems tip complex components C4J93_RS10730 PF00550 Phosphopantetheine attachment site C4J93_RS10735 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS10740 PF01464 Transglycosylase SLT domain C4J93_RS10745 PF09480 Type III secretion system protein PrgH-EprH (PrgH) C4J93_RS10750 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF C4J93_RS10760 PF01514 Secretory protein of YscJ/FliF family C4J93_RS10780 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS10780 PF00072 Response regulator receiver domain C4J93_RS10795 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS10795 PF00072 Response regulator receiver domain C4J93_RS10800 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS10800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS10800 PF00072 Response regulator receiver domain C4J93_RS10800 PF00989 PAS fold C4J93_RS10800 PF01627 Hpt domain C4J93_RS10800 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS10805 PF00561 alpha/beta hydrolase fold C4J93_RS10825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J93_RS10825 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J93_RS10830 PF00577 Outer membrane usher protein C4J93_RS10830 PF13953 PapC C-terminal domain C4J93_RS10830 PF13954 PapC N-terminal domain C4J93_RS10835 PF00419 Fimbrial protein C4J93_RS10850 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J93_RS10850 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J93_RS10875 PF13520 Amino acid permease C4J93_RS10885 PF00072 Response regulator receiver domain C4J93_RS10885 PF01339 CheB methylesterase C4J93_RS10890 PF03975 CheD chemotactic sensory transduction C4J93_RS10895 PF03705 CheR methyltransferase, all-alpha domain C4J93_RS10895 PF01739 CheR methyltransferase, SAM binding domain C4J93_RS10900 PF01584 CheW-like domain C4J93_RS10910 PF09078 CheY binding C4J93_RS10910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS10910 PF01584 CheW-like domain C4J93_RS10910 PF01627 Hpt domain C4J93_RS10910 PF02895 Signal transducing histidine kinase, homodimeric domain C4J93_RS10920 PF00072 Response regulator receiver domain C4J93_RS10925 PF00672 HAMP domain C4J93_RS10925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS10935 PF10282 Lactonase, 7-bladed beta-propeller C4J93_RS10945 PF01183 Glycosyl hydrolases family 25 C4J93_RS10950 PF02435 Levansucrase/Invertase C4J93_RS10955 PF03466 LysR substrate binding domain C4J93_RS10955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS10980 PF05067 Manganese containing catalase C4J93_RS10985 PF05974 Domain of unknown function (DUF892) C4J93_RS10990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS10990 PF13426 PAS domain C4J93_RS10990 PF00072 Response regulator receiver domain C4J93_RS11000 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C4J93_RS11005 PF00510 Cytochrome c oxidase subunit III C4J93_RS11010 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J93_RS11015 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4J93_RS11015 PF06481 COX Aromatic Rich Motif C4J93_RS11030 PF00107 Zinc-binding dehydrogenase C4J93_RS11030 PF13823 Alcohol dehydrogenase GroES-associated C4J93_RS11030 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS11060 PF10685 Stress-induced bacterial acidophilic repeat motif C4J93_RS11065 PF00360 Phytochrome region C4J93_RS11065 PF01590 GAF domain C4J93_RS11065 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS11065 PF00563 EAL domain C4J93_RS11090 PF04239 Protein of unknown function (DUF421) C4J93_RS11095 PF01739 CheR methyltransferase, SAM binding domain C4J93_RS11095 PF08448 PAS fold C4J93_RS11095 PF03705 CheR methyltransferase, all-alpha domain C4J93_RS11095 PF01339 CheB methylesterase C4J93_RS11130 PF02464 Competence-damaged protein C4J93_RS11130 PF18146 Damage-inducible protein CinA KH domain C4J93_RS11130 PF00994 Probable molybdopterin binding domain C4J93_RS11145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J93_RS11145 PF00034 Cytochrome c C4J93_RS11150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J93_RS11155 PF01799 [2Fe-2S] binding domain C4J93_RS11155 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J93_RS11160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS11160 PF03466 LysR substrate binding domain C4J93_RS11165 PF07690 Major Facilitator Superfamily C4J93_RS11175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS11175 PF03466 LysR substrate binding domain C4J93_RS11180 PF00171 Aldehyde dehydrogenase family C4J93_RS11185 PF16653 Saccharopine dehydrogenase C-terminal domain C4J93_RS11185 PF03435 Saccharopine dehydrogenase NADP binding domain C4J93_RS11190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4J93_RS11195 PF00356 Bacterial regulatory proteins, lacI family C4J93_RS11205 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS11210 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS11215 PF00005 ABC transporter C4J93_RS11215 PF08402 TOBE domain C4J93_RS11220 PF00149 Calcineurin-like phosphoesterase C4J93_RS11230 PF03969 AFG1-like ATPase C4J93_RS11235 PF00583 Acetyltransferase (GNAT) family C4J93_RS11245 PF00593 TonB dependent receptor C4J93_RS11245 PF07660 Secretin and TonB N terminus short domain C4J93_RS11245 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS11250 PF00884 Sulfatase C4J93_RS11255 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C4J93_RS11255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4J93_RS11260 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C4J93_RS11260 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C4J93_RS11275 PF00072 Response regulator receiver domain C4J93_RS11275 PF02954 Bacterial regulatory protein, Fis family C4J93_RS11275 PF00158 Sigma-54 interaction domain C4J93_RS11320 PF02615 Malate/L-lactate dehydrogenase C4J93_RS11345 PF13302 Acetyltransferase (GNAT) domain C4J93_RS11355 PF00860 Permease family C4J93_RS11360 PF12729 Four helix bundle sensory module for signal transduction C4J93_RS11360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS11360 PF00672 HAMP domain C4J93_RS11365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J93_RS11365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J93_RS11370 PF07690 Major Facilitator Superfamily C4J93_RS11375 PF00294 pfkB family carbohydrate kinase C4J93_RS11385 PF00356 Bacterial regulatory proteins, lacI family C4J93_RS11420 PF00873 AcrB/AcrD/AcrF family C4J93_RS11425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS11425 PF00529 HlyD membrane-fusion protein of T1SS C4J93_RS11430 PF00072 Response regulator receiver domain C4J93_RS11430 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS11435 PF00672 HAMP domain C4J93_RS11435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS11435 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS11440 PF08241 Methyltransferase domain C4J93_RS11445 PF01925 Sulfite exporter TauE/SafE C4J93_RS11455 PF00296 Luciferase-like monooxygenase C4J93_RS11460 PF00557 Metallopeptidase family M24 C4J93_RS11475 PF12951 Passenger-associated-transport-repeat C4J93_RS11480 PF00294 pfkB family carbohydrate kinase C4J93_RS11485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J93_RS11485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J93_RS11490 PF08125 Mannitol dehydrogenase C-terminal domain C4J93_RS11490 PF01232 Mannitol dehydrogenase Rossmann domain C4J93_RS11495 PF17912 MalK OB fold domain C4J93_RS11495 PF00005 ABC transporter C4J93_RS11500 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS11505 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS11535 PF08534 Redoxin C4J93_RS11540 PF13533 Biotin-lipoyl like C4J93_RS11545 PF00873 AcrB/AcrD/AcrF family C4J93_RS11550 PF00873 AcrB/AcrD/AcrF family C4J93_RS11560 PF02321 Outer membrane efflux protein C4J93_RS11575 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS11580 PF00005 ABC transporter C4J93_RS11585 PF13407 Periplasmic binding protein domain C4J93_RS11595 PF12833 Helix-turn-helix domain C4J93_RS11600 PF04966 Carbohydrate-selective porin, OprB family C4J93_RS11605 PF01011 PQQ enzyme repeat C4J93_RS11610 PF02743 Cache domain C4J93_RS11610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS11610 PF00672 HAMP domain C4J93_RS11615 PF01062 Bestrophin, RFP-TM, chloride channel C4J93_RS11625 PF17151 Periplasmic sensor domain C4J93_RS11625 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS11630 PF01022 Bacterial regulatory protein, arsR family C4J93_RS11635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J93_RS11640 PF00593 TonB dependent receptor C4J93_RS11640 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS11645 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS11650 PF00920 Dehydratase family C4J93_RS11655 PF07690 Major Facilitator Superfamily C4J93_RS11675 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J93_RS11685 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS11690 PF01263 Aldose 1-epimerase C4J93_RS11700 PF12852 Cupin C4J93_RS11700 PF12833 Helix-turn-helix domain C4J93_RS11705 PF07690 Major Facilitator Superfamily C4J93_RS11710 PF02798 Glutathione S-transferase, N-terminal domain C4J93_RS11715 PF13407 Periplasmic binding protein domain C4J93_RS11725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J93_RS11725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J93_RS11730 PF00158 Sigma-54 interaction domain C4J93_RS11730 PF02954 Bacterial regulatory protein, Fis family C4J93_RS11730 PF13426 PAS domain C4J93_RS11735 PF00356 Bacterial regulatory proteins, lacI family C4J93_RS11750 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS11750 PF14759 Reductase C-terminal C4J93_RS11760 PF02673 Bacitracin resistance protein BacA C4J93_RS11770 PF01965 DJ-1/PfpI family C4J93_RS11770 PF12833 Helix-turn-helix domain C4J93_RS11775 PF16925 Tetracyclin repressor-like, C-terminal domain C4J93_RS11775 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS11785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J93_RS11790 PF16197 Ketoacyl-synthetase C-terminal extension C4J93_RS11790 PF00107 Zinc-binding dehydrogenase C4J93_RS11790 PF00698 Acyl transferase domain C4J93_RS11790 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J93_RS11790 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J93_RS11790 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS11790 PF00550 Phosphopantetheine attachment site C4J93_RS11790 PF08659 KR domain C4J93_RS11790 PF14765 Polyketide synthase dehydratase C4J93_RS11800 PF03466 LysR substrate binding domain C4J93_RS11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS11810 PF00561 alpha/beta hydrolase fold C4J93_RS11825 PF00107 Zinc-binding dehydrogenase C4J93_RS11825 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS11830 PF00665 Integrase core domain C4J93_RS11845 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS11845 PF00072 Response regulator receiver domain C4J93_RS11855 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS11855 PF00501 AMP-binding enzyme C4J93_RS11860 PF08946 Osmosensory transporter coiled coil C4J93_RS11860 PF00083 Sugar (and other) transporter C4J93_RS11870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J93_RS11885 PF02254 TrkA-N domain C4J93_RS11885 PF00999 Sodium/hydrogen exchanger family C4J93_RS11890 PF13744 Helix-turn-helix domain C4J93_RS11900 PF01566 Natural resistance-associated macrophage protein C4J93_RS11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS11905 PF03466 LysR substrate binding domain C4J93_RS11930 PF03502 Nucleoside-specific channel-forming protein, Tsx C4J93_RS11935 PF12833 Helix-turn-helix domain C4J93_RS11960 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C4J93_RS11960 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C4J93_RS11965 PF02540 NAD synthase C4J93_RS11975 PF01266 FAD dependent oxidoreductase C4J93_RS11980 PF04324 BFD-like [2Fe-2S] binding domain C4J93_RS11980 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS11990 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS11995 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS12005 PF01614 Bacterial transcriptional regulator C4J93_RS12005 PF09339 IclR helix-turn-helix domain C4J93_RS12015 PF01554 MatE C4J93_RS12035 PF00550 Phosphopantetheine attachment site C4J93_RS12035 PF07993 Male sterility protein C4J93_RS12035 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS12035 PF00501 AMP-binding enzyme C4J93_RS12035 PF00668 Condensation domain C4J93_RS12040 PF00668 Condensation domain C4J93_RS12040 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS12040 PF00550 Phosphopantetheine attachment site C4J93_RS12040 PF00550 Phosphopantetheine attachment site C4J93_RS12040 PF00501 AMP-binding enzyme C4J93_RS12040 PF00501 AMP-binding enzyme C4J93_RS12040 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS12040 PF00668 Condensation domain C4J93_RS12045 PF00593 TonB dependent receptor C4J93_RS12045 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS12045 PF07660 Secretin and TonB N terminus short domain C4J93_RS12050 PF00664 ABC transporter transmembrane region C4J93_RS12050 PF00005 ABC transporter C4J93_RS12090 PF17954 Quercetinase C-terminal cupin domain C4J93_RS12090 PF02678 Pirin C4J93_RS12095 PF01965 DJ-1/PfpI family C4J93_RS12100 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS12105 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS12110 PF12833 Helix-turn-helix domain C4J93_RS12110 PF02311 AraC-like ligand binding domain C4J93_RS12115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS12115 PF03466 LysR substrate binding domain C4J93_RS12130 PF07969 Amidohydrolase family C4J93_RS12135 PF00857 Isochorismatase family C4J93_RS12140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS12140 PF03466 LysR substrate binding domain C4J93_RS12150 PF08448 PAS fold C4J93_RS12150 PF05231 MASE1 C4J93_RS12150 PF00563 EAL domain C4J93_RS12150 PF13426 PAS domain C4J93_RS12150 PF08447 PAS fold C4J93_RS12150 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS12160 PF02333 Phytase C4J93_RS12165 PF01618 MotA/TolQ/ExbB proton channel family C4J93_RS12170 PF02472 Biopolymer transport protein ExbD/TolR C4J93_RS12180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J93_RS12180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J93_RS12185 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS12185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS12185 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS12190 PF00296 Luciferase-like monooxygenase C4J93_RS12195 PF09084 NMT1/THI5 like C4J93_RS12200 PF00581 Rhodanese-like domain C4J93_RS12205 PF05995 Cysteine dioxygenase type I C4J93_RS12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS12210 PF03466 LysR substrate binding domain C4J93_RS12215 PF00596 Class II Aldolase and Adducin N-terminal domain C4J93_RS12220 PF02779 Transketolase, pyrimidine binding domain C4J93_RS12220 PF02780 Transketolase, C-terminal domain C4J93_RS12220 PF00456 Transketolase, thiamine diphosphate binding domain C4J93_RS12230 PF07063 Domain of unknown function (DUF1338) C4J93_RS12250 PF08496 Peptidase family S49 N-terminal C4J93_RS12250 PF01343 Peptidase family S49 C4J93_RS12255 PF02734 DAK2 domain C4J93_RS12260 PF02733 Dak1 domain C4J93_RS12265 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS12265 PF00107 Zinc-binding dehydrogenase C4J93_RS12275 PF13407 Periplasmic binding protein domain C4J93_RS12280 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS12285 PF00005 ABC transporter C4J93_RS12290 PF02502 Ribose/Galactose Isomerase C4J93_RS12295 PF04198 Putative sugar-binding domain C4J93_RS12305 PF00571 CBS domain C4J93_RS12305 PF03741 Integral membrane protein TerC family C4J93_RS12305 PF03471 Transporter associated domain C4J93_RS12325 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS12330 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS12335 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS12340 PF00005 ABC transporter C4J93_RS12360 PF00294 pfkB family carbohydrate kinase C4J93_RS12370 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS12370 PF08448 PAS fold C4J93_RS12370 PF00072 Response regulator receiver domain C4J93_RS12370 PF13188 PAS domain C4J93_RS12370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS12375 PF00501 AMP-binding enzyme C4J93_RS12375 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS12380 PF00106 short chain dehydrogenase C4J93_RS12390 PF00989 PAS fold C4J93_RS12390 PF00158 Sigma-54 interaction domain C4J93_RS12390 PF02954 Bacterial regulatory protein, Fis family C4J93_RS12395 PF00005 ABC transporter C4J93_RS12395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J93_RS12400 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS12400 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J93_RS12405 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS12410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J93_RS12415 PF05698 Bacterial trigger factor protein (TF) C-terminus C4J93_RS12430 PF05638 Type VI secretion system effector, Hcp C4J93_RS12445 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath C4J93_RS12455 PF05947 Type VI secretion system, TssF C4J93_RS12465 PF10431 C-terminal, D2-small domain, of ClpB protein C4J93_RS12465 PF07724 AAA domain (Cdc48 subfamily) C4J93_RS12465 PF17871 AAA lid domain C4J93_RS12465 PF00004 ATPase family associated with various cellular activities (AAA) C4J93_RS12470 PF00072 Response regulator receiver domain C4J93_RS12470 PF00158 Sigma-54 interaction domain C4J93_RS12470 PF02954 Bacterial regulatory protein, Fis family C4J93_RS12490 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE C4J93_RS12500 PF14331 ImcF-related N-terminal domain C4J93_RS12500 PF06761 Intracellular multiplication and human macrophage-killing C4J93_RS12500 PF06744 Type VI secretion protein IcmF C-terminal C4J93_RS12510 PF00069 Protein kinase domain C4J93_RS12525 PF02378 Phosphotransferase system, EIIC C4J93_RS12545 PF00106 short chain dehydrogenase C4J93_RS12550 PF00743 Flavin-binding monooxygenase-like C4J93_RS12555 PF12697 Alpha/beta hydrolase family C4J93_RS12560 PF00487 Fatty acid desaturase C4J93_RS12575 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C4J93_RS12595 PF00108 Thiolase, N-terminal domain C4J93_RS12595 PF02803 Thiolase, C-terminal domain C4J93_RS12600 PF00501 AMP-binding enzyme C4J93_RS12600 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS12605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J93_RS12605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J93_RS12630 PF10282 Lactonase, 7-bladed beta-propeller C4J93_RS12650 PF12320 Type 5 capsule protein repressor C-terminal domain C4J93_RS12650 PF00149 Calcineurin-like phosphoesterase C4J93_RS12680 PF01882 Protein of unknown function DUF58 C4J93_RS12685 PF17863 AAA lid domain C4J93_RS12685 PF07726 ATPase family associated with various cellular activities (AAA) C4J93_RS12695 PF05088 Bacterial NAD-glutamate dehydrogenase C4J93_RS12700 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS12700 PF07729 FCD domain C4J93_RS12705 PF07729 FCD domain C4J93_RS12705 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS12710 PF00375 Sodium:dicarboxylate symporter family C4J93_RS12715 PF03352 Methyladenine glycosylase C4J93_RS12715 PF13302 Acetyltransferase (GNAT) domain C4J93_RS12715 PF00958 GMP synthase C terminal domain C4J93_RS12715 PF00117 Glutamine amidotransferase class-I C4J93_RS12715 PF13673 Acetyltransferase (GNAT) domain C4J93_RS12725 PF14834 Glutathione S-transferase, C-terminal domain C4J93_RS12725 PF02798 Glutathione S-transferase, N-terminal domain C4J93_RS12745 PF02633 Creatinine amidohydrolase C4J93_RS12760 PF00672 HAMP domain C4J93_RS12760 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS12765 PF00072 Response regulator receiver domain C4J93_RS12765 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS12775 PF01418 Helix-turn-helix domain, rpiR family C4J93_RS12775 PF01380 SIS domain C4J93_RS12785 PF00294 pfkB family carbohydrate kinase C4J93_RS12790 PF01261 Xylose isomerase-like TIM barrel C4J93_RS12795 PF04962 KduI/IolB family C4J93_RS12805 PF00205 Thiamine pyrophosphate enzyme, central domain C4J93_RS12805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J93_RS12805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J93_RS12810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J93_RS12810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J93_RS12815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J93_RS12815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J93_RS12820 PF13407 Periplasmic binding protein domain C4J93_RS12825 PF00005 ABC transporter C4J93_RS12830 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS12835 PF01258 Prokaryotic dksA/traR C4-type zinc finger C4J93_RS12840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS12880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J93_RS12880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J93_RS12885 PF00445 Ribonuclease T2 family C4J93_RS12890 PF01810 LysE type translocator C4J93_RS12895 PF12833 Helix-turn-helix domain C4J93_RS12900 PF00005 ABC transporter C4J93_RS12900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J93_RS12905 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J93_RS12905 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS12910 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS12915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J93_RS12920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J93_RS12930 PF16123 Hydroxyacylglutathione hydrolase C-terminus C4J93_RS12930 PF00753 Metallo-beta-lactamase superfamily C4J93_RS12940 PF00075 RNase H C4J93_RS12945 PF00929 Exonuclease C4J93_RS12950 PF00672 HAMP domain C4J93_RS12950 PF17200 Single Cache domain 2 C4J93_RS12950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS12955 PF02673 Bacitracin resistance protein BacA C4J93_RS12970 PF03466 LysR substrate binding domain C4J93_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS12975 PF02525 Flavodoxin-like fold C4J93_RS12985 PF07690 Major Facilitator Superfamily C4J93_RS12990 PF00005 ABC transporter C4J93_RS12990 PF12848 ABC transporter C4J93_RS12995 PF07690 Major Facilitator Superfamily C4J93_RS13015 PF13298 DNA polymerase Ligase (LigD) C4J93_RS13015 PF01068 ATP dependent DNA ligase domain C4J93_RS13015 PF04679 ATP dependent DNA ligase C terminal region C4J93_RS13020 PF02735 Ku70/Ku80 beta-barrel domain C4J93_RS13030 PF07995 Glucose / Sorbosone dehydrogenase C4J93_RS13045 PF13091 PLD-like domain C4J93_RS13050 PF13473 Cupredoxin-like domain C4J93_RS13050 PF09375 Imelysin C4J93_RS13055 PF04261 Dyp-type peroxidase family C4J93_RS13060 PF13473 Cupredoxin-like domain C4J93_RS13060 PF09375 Imelysin C4J93_RS13065 PF03239 Iron permease FTR1 family C4J93_RS13070 PF12833 Helix-turn-helix domain C4J93_RS13080 PF02321 Outer membrane efflux protein C4J93_RS13085 PF00873 AcrB/AcrD/AcrF family C4J93_RS13090 PF00529 HlyD membrane-fusion protein of T1SS C4J93_RS13090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS13095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS13095 PF03466 LysR substrate binding domain C4J93_RS13105 PF00158 Sigma-54 interaction domain C4J93_RS13105 PF02954 Bacterial regulatory protein, Fis family C4J93_RS13105 PF00072 Response regulator receiver domain C4J93_RS13110 PF09308 LuxQ, periplasmic C4J93_RS13110 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS13110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS13110 PF00072 Response regulator receiver domain C4J93_RS13115 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS13115 PF00072 Response regulator receiver domain C4J93_RS13120 PF07730 Histidine kinase C4J93_RS13120 PF17200 Single Cache domain 2 C4J93_RS13155 PF02321 Outer membrane efflux protein C4J93_RS13160 PF07690 Major Facilitator Superfamily C4J93_RS13165 PF13533 Biotin-lipoyl like C4J93_RS13185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS13195 PF00202 Aminotransferase class-III C4J93_RS13220 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS13225 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J93_RS13225 PF00005 ABC transporter C4J93_RS13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS13235 PF03466 LysR substrate binding domain C4J93_RS13250 PF13407 Periplasmic binding protein domain C4J93_RS13270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS13270 PF03466 LysR substrate binding domain C4J93_RS13275 PF00857 Isochorismatase family C4J93_RS13285 PF00107 Zinc-binding dehydrogenase C4J93_RS13285 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS13295 PF00005 ABC transporter C4J93_RS13295 PF00664 ABC transporter transmembrane region C4J93_RS13315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS13315 PF03466 LysR substrate binding domain C4J93_RS13320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J93_RS13330 PF03466 LysR substrate binding domain C4J93_RS13330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS13350 PF00561 alpha/beta hydrolase fold C4J93_RS13355 PF07859 alpha/beta hydrolase fold C4J93_RS13370 PF00005 ABC transporter C4J93_RS13370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J93_RS13375 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J93_RS13375 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS13380 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS13385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J93_RS13390 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS13390 PF00593 TonB dependent receptor C4J93_RS13395 PF00005 ABC transporter C4J93_RS13400 PF13407 Periplasmic binding protein domain C4J93_RS13405 PF13426 PAS domain C4J93_RS13405 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS13405 PF00072 Response regulator receiver domain C4J93_RS13405 PF08448 PAS fold C4J93_RS13405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS13410 PF03466 LysR substrate binding domain C4J93_RS13410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS13415 PF00698 Acyl transferase domain C4J93_RS13415 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS13415 PF00550 Phosphopantetheine attachment site C4J93_RS13415 PF08659 KR domain C4J93_RS13415 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J93_RS13415 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J93_RS13415 PF16197 Ketoacyl-synthetase C-terminal extension C4J93_RS13415 PF14765 Polyketide synthase dehydratase C4J93_RS13415 PF00107 Zinc-binding dehydrogenase C4J93_RS13430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4J93_RS13430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4J93_RS13430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4J93_RS13430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4J93_RS13435 PF02678 Pirin C4J93_RS13435 PF17954 Quercetinase C-terminal cupin domain C4J93_RS13440 PF13361 UvrD-like helicase C-terminal domain C4J93_RS13440 PF00580 UvrD/REP helicase N-terminal domain C4J93_RS13450 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) C4J93_RS13450 PF08548 Peptidase M10 serralysin C terminal C4J93_RS13450 PF00413 Matrixin C4J93_RS13455 PF02974 Protease inhibitor Inh C4J93_RS13460 PF00005 ABC transporter C4J93_RS13460 PF00664 ABC transporter transmembrane region C4J93_RS13465 PF00529 HlyD membrane-fusion protein of T1SS C4J93_RS13470 PF02321 Outer membrane efflux protein C4J93_RS13475 PF00082 Subtilase family C4J93_RS13475 PF12951 Passenger-associated-transport-repeat C4J93_RS13475 PF03797 Autotransporter beta-domain C4J93_RS13480 PF03797 Autotransporter beta-domain C4J93_RS13480 PF12951 Passenger-associated-transport-repeat C4J93_RS13480 PF00082 Subtilase family C4J93_RS13485 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) C4J93_RS13495 PF18081 Fanconi anemia-associated nuclease SAP domain C4J93_RS13495 PF08774 VRR-NUC domain C4J93_RS13500 PF00271 Helicase conserved C-terminal domain C4J93_RS13500 PF00270 DEAD/DEAH box helicase C4J93_RS13505 PF14403 Circularly permuted ATP-grasp type 2 C4J93_RS13505 PF04168 A predicted alpha-helical domain with a conserved ER motif. C4J93_RS13510 PF14403 Circularly permuted ATP-grasp type 2 C4J93_RS13530 PF00999 Sodium/hydrogen exchanger family C4J93_RS13535 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS13535 PF00563 EAL domain C4J93_RS13535 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS13540 PF00072 Response regulator receiver domain C4J93_RS13545 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS13545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS13545 PF00989 PAS fold C4J93_RS13555 PF00005 ABC transporter C4J93_RS13560 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS13565 PF13407 Periplasmic binding protein domain C4J93_RS13570 PF00356 Bacterial regulatory proteins, lacI family C4J93_RS13575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J93_RS13575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J93_RS13580 PF01037 Lrp/AsnC ligand binding domain C4J93_RS13590 PF01136 Peptidase family U32 C4J93_RS13590 PF12392 Collagenase C4J93_RS13595 PF01042 Endoribonuclease L-PSP C4J93_RS13610 PF00296 Luciferase-like monooxygenase C4J93_RS13630 PF02223 Thymidylate kinase C4J93_RS13635 PF00578 AhpC/TSA family C4J93_RS13635 PF02683 Cytochrome C biogenesis protein transmembrane region C4J93_RS13635 PF17991 Thioredoxin like C-terminal domain C4J93_RS13640 PF00672 HAMP domain C4J93_RS13640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS13640 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS13645 PF00072 Response regulator receiver domain C4J93_RS13645 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS13650 PF06441 Epoxide hydrolase N terminus C4J93_RS13655 PF00561 alpha/beta hydrolase fold C4J93_RS13675 PF00067 Cytochrome P450 C4J93_RS13680 PF03466 LysR substrate binding domain C4J93_RS13680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS13690 PF01361 Tautomerase enzyme C4J93_RS13695 PF01243 Pyridoxamine 5'-phosphate oxidase C4J93_RS13695 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C4J93_RS13700 PF02567 Phenazine biosynthesis-like protein C4J93_RS13705 PF00117 Glutamine amidotransferase class-I C4J93_RS13705 PF00425 chorismate binding enzyme C4J93_RS13710 PF00857 Isochorismatase family C4J93_RS13715 PF01474 Class-II DAHP synthetase family C4J93_RS13720 PF03284 Phenazine biosynthesis protein A/B C4J93_RS13725 PF03284 Phenazine biosynthesis protein A/B C4J93_RS13730 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS13730 PF03472 Autoinducer binding domain C4J93_RS13735 PF00765 Autoinducer synthase C4J93_RS13740 PF13426 PAS domain C4J93_RS13740 PF07536 HWE histidine kinase C4J93_RS13740 PF08447 PAS fold C4J93_RS13770 PF00117 Glutamine amidotransferase class-I C4J93_RS13795 PF01791 DeoC/LacD family aldolase C4J93_RS13800 PF00455 DeoR C terminal sensor domain C4J93_RS13800 PF08220 DeoR-like helix-turn-helix domain C4J93_RS13810 PF07690 Major Facilitator Superfamily C4J93_RS13815 PF00294 pfkB family carbohydrate kinase C4J93_RS13820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS13820 PF00672 HAMP domain C4J93_RS13825 PF07690 Major Facilitator Superfamily C4J93_RS13830 PF00589 Phage integrase family C4J93_RS13830 PF02899 Phage integrase, N-terminal SAM-like domain C4J93_RS13840 PF00535 Glycosyl transferase family 2 C4J93_RS13845 PF02911 Formyl transferase, C-terminal domain C4J93_RS13845 PF01370 NAD dependent epimerase/dehydratase family C4J93_RS13845 PF00551 Formyl transferase C4J93_RS13850 PF01522 Polysaccharide deacetylase C4J93_RS13855 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C4J93_RS13860 PF00892 EamA-like transporter family C4J93_RS13865 PF00893 Small Multidrug Resistance protein C4J93_RS13870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4J93_RS13870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4J93_RS13870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4J93_RS13890 PF00378 Enoyl-CoA hydratase/isomerase C4J93_RS13895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS13895 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS13895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS13900 PF00378 Enoyl-CoA hydratase/isomerase C4J93_RS13905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS13905 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS13905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS13910 PF02803 Thiolase, C-terminal domain C4J93_RS13910 PF00108 Thiolase, N-terminal domain C4J93_RS13915 PF00106 short chain dehydrogenase C4J93_RS13920 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS13920 PF00501 AMP-binding enzyme C4J93_RS13930 PF06745 KaiC C4J93_RS13935 PF08448 PAS fold C4J93_RS13935 PF00072 Response regulator receiver domain C4J93_RS13935 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS13935 PF13188 PAS domain C4J93_RS13945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J93_RS13945 PF00072 Response regulator receiver domain C4J93_RS13945 PF01627 Hpt domain C4J93_RS13945 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS13945 PF00672 HAMP domain C4J93_RS13950 PF01339 CheB methylesterase C4J93_RS13955 PF03705 CheR methyltransferase, all-alpha domain C4J93_RS13955 PF01739 CheR methyltransferase, SAM binding domain C4J93_RS13960 PF01627 Hpt domain C4J93_RS13960 PF00072 Response regulator receiver domain C4J93_RS13960 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS13960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS13965 PF00072 Response regulator receiver domain C4J93_RS13965 PF13188 PAS domain C4J93_RS13965 PF08448 PAS fold C4J93_RS13965 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS13965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS13975 PF11769 Protein of unknown function (DUF3313) C4J93_RS13985 PF00293 NUDIX domain C4J93_RS13990 PF05175 Methyltransferase small domain C4J93_RS13995 PF00067 Cytochrome P450 C4J93_RS14000 PF01177 Asp/Glu/Hydantoin racemase C4J93_RS14005 PF00583 Acetyltransferase (GNAT) family C4J93_RS14015 PF02595 Glycerate kinase family C4J93_RS14020 PF05651 Putative sugar diacid recognition C4J93_RS14020 PF17853 GGDEF-like domain C4J93_RS14020 PF13556 PucR C-terminal helix-turn-helix domain C4J93_RS14025 PF07690 Major Facilitator Superfamily C4J93_RS14035 PF03466 LysR substrate binding domain C4J93_RS14035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS14040 PF00248 Aldo/keto reductase family C4J93_RS14045 PF00892 EamA-like transporter family C4J93_RS14050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J93_RS14055 PF00563 EAL domain C4J93_RS14055 PF12792 CSS motif domain associated with EAL C4J93_RS14070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J93_RS14075 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS14075 PF13192 Thioredoxin domain C4J93_RS14080 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4J93_RS14080 PF00578 AhpC/TSA family C4J93_RS14095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J93_RS14095 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS14100 PF00483 Nucleotidyl transferase C4J93_RS14120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J93_RS14125 PF00034 Cytochrome c C4J93_RS14145 PF03060 Nitronate monooxygenase C4J93_RS14155 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS14160 PF03459 TOBE domain C4J93_RS14160 PF00005 ABC transporter C4J93_RS14170 PF12848 ABC transporter C4J93_RS14170 PF00005 ABC transporter C4J93_RS14175 PF06912 Protein of unknown function (DUF1275) C4J93_RS14190 PF03591 AzlC protein C4J93_RS14205 PF02040 Arsenical pump membrane protein C4J93_RS14210 PF01810 LysE type translocator C4J93_RS14275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J93_RS14275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J93_RS14280 PF01638 HxlR-like helix-turn-helix C4J93_RS14295 PF00011 Hsp20/alpha crystallin family C4J93_RS14315 PF13520 Amino acid permease C4J93_RS14320 PF05544 Proline racemase C4J93_RS14325 PF00701 Dihydrodipicolinate synthetase family C4J93_RS14335 PF00171 Aldehyde dehydrogenase family C4J93_RS14340 PF01266 FAD dependent oxidoreductase C4J93_RS14345 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS14350 PF05378 Hydantoinase/oxoprolinase N-terminal region C4J93_RS14350 PF01968 Hydantoinase/oxoprolinase C4J93_RS14365 PF01177 Asp/Glu/Hydantoin racemase C4J93_RS14370 PF07690 Major Facilitator Superfamily C4J93_RS14380 PF12833 Helix-turn-helix domain C4J93_RS14380 PF01965 DJ-1/PfpI family C4J93_RS14385 PF01810 LysE type translocator C4J93_RS14400 PF03167 Uracil DNA glycosylase superfamily C4J93_RS14410 PF00529 HlyD membrane-fusion protein of T1SS C4J93_RS14410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS14415 PF07690 Major Facilitator Superfamily C4J93_RS14425 PF00248 Aldo/keto reductase family C4J93_RS14430 PF03466 LysR substrate binding domain C4J93_RS14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS14450 PF01804 Penicillin amidase C4J93_RS14465 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS14475 PF00005 ABC transporter C4J93_RS14495 PF03466 LysR substrate binding domain C4J93_RS14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS14500 PF00248 Aldo/keto reductase family C4J93_RS14505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS14505 PF12729 Four helix bundle sensory module for signal transduction C4J93_RS14505 PF00672 HAMP domain C4J93_RS14515 PF00561 alpha/beta hydrolase fold C4J93_RS14520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J93_RS14520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J93_RS14520 PF01842 ACT domain C4J93_RS14525 PF08323 Starch synthase catalytic domain C4J93_RS14525 PF00534 Glycosyl transferases group 1 C4J93_RS14530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4J93_RS14530 PF11941 Domain of unknown function (DUF3459) C4J93_RS14530 PF00128 Alpha amylase, catalytic domain C4J93_RS14535 PF02446 4-alpha-glucanotransferase C4J93_RS14540 PF00128 Alpha amylase, catalytic domain C4J93_RS14550 PF00128 Alpha amylase, catalytic domain C4J93_RS14550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4J93_RS14580 PF00593 TonB dependent receptor C4J93_RS14580 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS14585 PF00672 HAMP domain C4J93_RS14585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS14585 PF17200 Single Cache domain 2 C4J93_RS14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS14640 PF03466 LysR substrate binding domain C4J93_RS14645 PF07690 Major Facilitator Superfamily C4J93_RS14655 PF00571 CBS domain C4J93_RS14655 PF00291 Pyridoxal-phosphate dependent enzyme C4J93_RS14660 PF01053 Cys/Met metabolism PLP-dependent enzyme C4J93_RS14670 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C4J93_RS14670 PF18381 YcaO cyclodehydratase C-terminal domain C4J93_RS14675 PF13091 PLD-like domain C4J93_RS14675 PF13087 AAA domain C4J93_RS14685 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS14715 PF07995 Glucose / Sorbosone dehydrogenase C4J93_RS14720 PF07690 Major Facilitator Superfamily C4J93_RS14725 PF13302 Acetyltransferase (GNAT) domain C4J93_RS14725 PF00117 Glutamine amidotransferase class-I C4J93_RS14725 PF00958 GMP synthase C terminal domain C4J93_RS14725 PF13673 Acetyltransferase (GNAT) domain C4J93_RS14725 PF03352 Methyladenine glycosylase C4J93_RS14730 PF08946 Osmosensory transporter coiled coil C4J93_RS14730 PF00083 Sugar (and other) transporter C4J93_RS14740 PF06719 AraC-type transcriptional regulator N-terminus C4J93_RS14740 PF12833 Helix-turn-helix domain C4J93_RS14745 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C4J93_RS14750 PF07690 Major Facilitator Superfamily C4J93_RS14755 PF12833 Helix-turn-helix domain C4J93_RS14755 PF02311 AraC-like ligand binding domain C4J93_RS14760 PF07690 Major Facilitator Superfamily C4J93_RS14770 PF01425 Amidase C4J93_RS14780 PF00155 Aminotransferase class I and II C4J93_RS14780 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS14785 PF00892 EamA-like transporter family C4J93_RS14790 PF01738 Dienelactone hydrolase family C4J93_RS14795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS14795 PF03466 LysR substrate binding domain C4J93_RS14800 PF00144 Beta-lactamase C4J93_RS14805 PF00144 Beta-lactamase C4J93_RS14810 PF00672 HAMP domain C4J93_RS14810 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS14810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS14815 PF00072 Response regulator receiver domain C4J93_RS14815 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS14825 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C4J93_RS14830 PF00582 Universal stress protein family C4J93_RS14840 PF11791 Aconitate B N-terminal domain C4J93_RS14840 PF06434 Aconitate hydratase 2 N-terminus C4J93_RS14840 PF00330 Aconitase family (aconitate hydratase) C4J93_RS14855 PF00857 Isochorismatase family C4J93_RS14885 PF11940 Domain of unknown function (DUF3458) Ig-like fold C4J93_RS14885 PF01433 Peptidase family M1 domain C4J93_RS14885 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C4J93_RS14895 PF07023 Protein of unknown function (DUF1315) C4J93_RS14900 PF01694 Rhomboid family C4J93_RS14900 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C4J93_RS14905 PF00149 Calcineurin-like phosphoesterase C4J93_RS14910 PF01513 ATP-NAD kinase C4J93_RS14925 PF07728 AAA domain (dynein-related subfamily) C4J93_RS14925 PF13519 von Willebrand factor type A domain C4J93_RS14925 PF17863 AAA lid domain C4J93_RS14930 PF02514 CobN/Magnesium Chelatase C4J93_RS14935 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J93_RS14935 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J93_RS14950 PF01890 Cobalamin synthesis G C-terminus C4J93_RS14955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J93_RS14960 PF01521 Iron-sulphur cluster biosynthesis C4J93_RS14960 PF01106 NifU-like domain C4J93_RS14965 PF00809 Pterin binding enzyme C4J93_RS14965 PF02310 B12 binding domain C4J93_RS14965 PF02607 B12 binding domain C4J93_RS14965 PF02965 Vitamin B12 dependent methionine synthase, activation domain C4J93_RS14965 PF02574 Homocysteine S-methyltransferase C4J93_RS14975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4J93_RS14975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4J93_RS14985 PF00205 Thiamine pyrophosphate enzyme, central domain C4J93_RS14985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J93_RS14985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J93_RS14990 PF03358 NADPH-dependent FMN reductase C4J93_RS15010 PF00583 Acetyltransferase (GNAT) family C4J93_RS15015 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C4J93_RS15015 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C4J93_RS15015 PF01276 Orn/Lys/Arg decarboxylase, major domain C4J93_RS15035 PF03372 Endonuclease/Exonuclease/phosphatase family C4J93_RS15045 PF00155 Aminotransferase class I and II C4J93_RS15055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS15055 PF03459 TOBE domain C4J93_RS15065 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS15070 PF00005 ABC transporter C4J93_RS15075 PF00268 Ribonucleotide reductase, small chain C4J93_RS15090 PF01066 CDP-alcohol phosphatidyltransferase C4J93_RS15095 PF01925 Sulfite exporter TauE/SafE C4J93_RS15100 PF00293 NUDIX domain C4J93_RS15100 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C4J93_RS15100 PF09297 NADH pyrophosphatase zinc ribbon domain C4J93_RS15105 PF00378 Enoyl-CoA hydratase/isomerase C4J93_RS15110 PF02810 SEC-C motif C4J93_RS15110 PF03695 Uncharacterised protein family (UPF0149) C4J93_RS15115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4J93_RS15125 PF02525 Flavodoxin-like fold C4J93_RS15145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS15145 PF00072 Response regulator receiver domain C4J93_RS15145 PF13426 PAS domain C4J93_RS15155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4J93_RS15155 PF02806 Alpha amylase, C-terminal all-beta domain C4J93_RS15155 PF00128 Alpha amylase, catalytic domain C4J93_RS15160 PF00128 Alpha amylase, catalytic domain C4J93_RS15160 PF16657 Maltogenic Amylase, C-terminal domain C4J93_RS15165 PF00128 Alpha amylase, catalytic domain C4J93_RS15165 PF11896 Domain of unknown function (DUF3416) C4J93_RS15170 PF02308 MgtC family C4J93_RS15180 PF00155 Aminotransferase class I and II C4J93_RS15180 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS15195 PF04960 Glutaminase C4J93_RS15200 PF00296 Luciferase-like monooxygenase C4J93_RS15205 PF17755 UvrA DNA-binding domain C4J93_RS15210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS15210 PF00072 Response regulator receiver domain C4J93_RS15210 PF13426 PAS domain C4J93_RS15215 PF01336 OB-fold nucleic acid binding domain C4J93_RS15215 PF02811 PHP domain C4J93_RS15215 PF14579 Helix-hairpin-helix motif C4J93_RS15215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C4J93_RS15215 PF07733 Bacterial DNA polymerase III alpha NTPase domain C4J93_RS15230 PF03846 Cell division inhibitor SulA C4J93_RS15235 PF00717 Peptidase S24-like C4J93_RS15235 PF01726 LexA DNA binding domain C4J93_RS15240 PF00293 NUDIX domain C4J93_RS15245 PF12146 Serine aminopeptidase, S33 C4J93_RS15250 PF01070 FMN-dependent dehydrogenase C4J93_RS15275 PF01965 DJ-1/PfpI family C4J93_RS15290 PF02630 SCO1/SenC C4J93_RS15325 PF00072 Response regulator receiver domain C4J93_RS15325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS15325 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS15325 PF01627 Hpt domain C4J93_RS15330 PF00072 Response regulator receiver domain C4J93_RS15330 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS15340 PF01042 Endoribonuclease L-PSP C4J93_RS15350 PF01546 Peptidase family M20/M25/M40 C4J93_RS15350 PF07687 Peptidase dimerisation domain C4J93_RS15355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS15355 PF03466 LysR substrate binding domain C4J93_RS15360 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J93_RS15365 PF04536 TPM domain C4J93_RS15370 PF12697 Alpha/beta hydrolase family C4J93_RS15375 PF01590 GAF domain C4J93_RS15375 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS15375 PF08446 PAS fold C4J93_RS15375 PF00360 Phytochrome region C4J93_RS15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS15380 PF01678 Diaminopimelate epimerase C4J93_RS15395 PF00106 short chain dehydrogenase C4J93_RS15400 PF00248 Aldo/keto reductase family C4J93_RS15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS15405 PF03466 LysR substrate binding domain C4J93_RS15415 PF02627 Carboxymuconolactone decarboxylase family C4J93_RS15430 PF05726 Pirin C-terminal cupin domain C4J93_RS15430 PF02678 Pirin C4J93_RS15435 PF07690 Major Facilitator Superfamily C4J93_RS15440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS15445 PF00873 AcrB/AcrD/AcrF family C4J93_RS15495 PF01546 Peptidase family M20/M25/M40 C4J93_RS15495 PF07687 Peptidase dimerisation domain C4J93_RS15500 PF05230 MASE2 domain C4J93_RS15500 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS15505 PF01810 LysE type translocator C4J93_RS15515 PF00301 Rubredoxin C4J93_RS15520 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS15520 PF07840 FadR C-terminal domain C4J93_RS15525 PF01037 Lrp/AsnC ligand binding domain C4J93_RS15530 PF01053 Cys/Met metabolism PLP-dependent enzyme C4J93_RS15535 PF00230 Major intrinsic protein C4J93_RS15540 PF07690 Major Facilitator Superfamily C4J93_RS15555 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS15555 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS15555 PF00563 EAL domain C4J93_RS15560 PF00419 Fimbrial protein C4J93_RS15565 PF00577 Outer membrane usher protein C4J93_RS15565 PF13954 PapC N-terminal domain C4J93_RS15565 PF13953 PapC C-terminal domain C4J93_RS15570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J93_RS15570 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J93_RS15575 PF16970 Type-1 fimbrial protein, A C4J93_RS15580 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS15580 PF00989 PAS fold C4J93_RS15580 PF01627 Hpt domain C4J93_RS15580 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS15580 PF00072 Response regulator receiver domain C4J93_RS15585 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS15585 PF00072 Response regulator receiver domain C4J93_RS15590 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS15590 PF01590 GAF domain C4J93_RS15590 PF00360 Phytochrome region C4J93_RS15590 PF00563 EAL domain C4J93_RS15595 PF13593 SBF-like CPA transporter family (DUF4137) C4J93_RS15600 PF02311 AraC-like ligand binding domain C4J93_RS15600 PF12833 Helix-turn-helix domain C4J93_RS15610 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS15610 PF00107 Zinc-binding dehydrogenase C4J93_RS15610 PF13823 Alcohol dehydrogenase GroES-associated C4J93_RS15615 PF04107 Glutamate-cysteine ligase family 2(GCS2) C4J93_RS15645 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS15650 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS15655 PF00005 ABC transporter C4J93_RS15655 PF08402 TOBE domain C4J93_RS15660 PF17912 MalK OB fold domain C4J93_RS15660 PF00005 ABC transporter C4J93_RS15665 PF00158 Sigma-54 interaction domain C4J93_RS15665 PF02954 Bacterial regulatory protein, Fis family C4J93_RS15665 PF01590 GAF domain C4J93_RS15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS15685 PF03466 LysR substrate binding domain C4J93_RS15690 PF02525 Flavodoxin-like fold C4J93_RS15700 PF02543 Carbamoyltransferase N-terminus C4J93_RS15700 PF16861 Carbamoyltransferase C-terminus C4J93_RS15715 PF02698 DUF218 domain C4J93_RS15755 PF11799 impB/mucB/samB family C-terminal domain C4J93_RS15755 PF00817 impB/mucB/samB family C4J93_RS15755 PF13438 Domain of unknown function (DUF4113) C4J93_RS15760 PF00717 Peptidase S24-like C4J93_RS15775 PF01027 Inhibitor of apoptosis-promoting Bax1 C4J93_RS15780 PF01565 FAD binding domain C4J93_RS15780 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C4J93_RS15785 PF01451 Low molecular weight phosphotyrosine protein phosphatase C4J93_RS15790 PF02348 Cytidylyltransferase C4J93_RS15795 PF03966 Trm112p-like protein C4J93_RS15800 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C4J93_RS15805 PF02472 Biopolymer transport protein ExbD/TolR C4J93_RS15810 PF01618 MotA/TolQ/ExbB proton channel family C4J93_RS15815 PF00753 Metallo-beta-lactamase superfamily C4J93_RS15815 PF03772 Competence protein C4J93_RS15825 PF00672 HAMP domain C4J93_RS15825 PF16750 Sensor domain of 2-component histidine kinase C4J93_RS15825 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS15825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS15830 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS15830 PF00072 Response regulator receiver domain C4J93_RS15840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J93_RS15840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J93_RS15855 PF00085 Thioredoxin C4J93_RS15860 PF03960 ArsC family C4J93_RS15865 PF03358 NADPH-dependent FMN reductase C4J93_RS15875 PF03352 Methyladenine glycosylase C4J93_RS15880 PF01171 PP-loop family C4J93_RS15890 PF04893 Yip1 domain C4J93_RS15895 PF10263 SprT-like family C4J93_RS15895 PF17283 SprT-like zinc ribbon domain C4J93_RS15900 PF02515 CoA-transferase family III C4J93_RS15905 PF02635 DsrE/DsrF-like family C4J93_RS15910 PF02635 DsrE/DsrF-like family C4J93_RS15920 PF04358 DsrC like protein C4J93_RS15925 PF00591 Glycosyl transferase family, a/b domain C4J93_RS15925 PF02885 Glycosyl transferase family, helical bundle domain C4J93_RS15930 PF13409 Glutathione S-transferase, N-terminal domain C4J93_RS15935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J93_RS15935 PF14824 Sirohaem biosynthesis protein central C4J93_RS15935 PF10414 Sirohaem synthase dimerisation region C4J93_RS15940 PF02403 Seryl-tRNA synthetase N-terminal domain C4J93_RS15940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4J93_RS15945 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C4J93_RS15950 PF16193 AAA C-terminal domain C4J93_RS15950 PF12002 MgsA AAA+ ATPase C terminal C4J93_RS15950 PF00004 ATPase family associated with various cellular activities (AAA) C4J93_RS15955 PF03548 Outer membrane lipoprotein carrier protein LolA C4J93_RS15960 PF09397 Ftsk gamma domain C4J93_RS15960 PF17854 FtsK alpha domain C4J93_RS15960 PF01580 FtsK/SpoIIIE family C4J93_RS15960 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C4J93_RS15965 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C4J93_RS15970 PF04377 Arginine-tRNA-protein transferase, C terminus C4J93_RS15970 PF04376 Arginine-tRNA-protein transferase, N terminus C4J93_RS15975 PF01176 Translation initiation factor 1A / IF-1 C4J93_RS15980 PF00004 ATPase family associated with various cellular activities (AAA) C4J93_RS15980 PF07724 AAA domain (Cdc48 subfamily) C4J93_RS15980 PF10431 C-terminal, D2-small domain, of ClpB protein C4J93_RS15980 PF02861 Clp amino terminal domain, pathogenicity island component C4J93_RS15980 PF17871 AAA lid domain C4J93_RS15985 PF02617 ATP-dependent Clp protease adaptor protein ClpS C4J93_RS15990 PF00313 'Cold-shock' DNA-binding domain C4J93_RS15995 PF00180 Isocitrate/isopropylmalate dehydrogenase C4J93_RS16000 PF03971 Monomeric isocitrate dehydrogenase C4J93_RS16005 PF03466 LysR substrate binding domain C4J93_RS16005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS16015 PF00293 NUDIX domain C4J93_RS16025 PF04356 Protein of unknown function (DUF489) C4J93_RS16030 PF08328 Adenylosuccinate lyase C-terminal C4J93_RS16030 PF00206 Lyase C4J93_RS16035 PF08007 Cupin superfamily protein C4J93_RS16040 PF13673 Acetyltransferase (GNAT) domain C4J93_RS16050 PF00463 Isocitrate lyase family C4J93_RS16055 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C4J93_RS16060 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C4J93_RS16065 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C4J93_RS16065 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C4J93_RS16075 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C4J93_RS16075 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C4J93_RS16080 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C4J93_RS16080 PF00384 Molybdopterin oxidoreductase C4J93_RS16080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4J93_RS16085 PF00146 NADH dehydrogenase C4J93_RS16090 PF12838 4Fe-4S dicluster domain C4J93_RS16095 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C4J93_RS16100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C4J93_RS16105 PF00361 Proton-conducting membrane transporter C4J93_RS16105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4J93_RS16110 PF00361 Proton-conducting membrane transporter C4J93_RS16115 PF00361 Proton-conducting membrane transporter C4J93_RS16120 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system C4J93_RS16125 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA C4J93_RS16155 PF07690 Major Facilitator Superfamily C4J93_RS16170 PF00171 Aldehyde dehydrogenase family C4J93_RS16185 PF00005 ABC transporter C4J93_RS16185 PF12704 MacB-like periplasmic core domain C4J93_RS16185 PF02687 FtsX-like permease family C4J93_RS16190 PF12704 MacB-like periplasmic core domain C4J93_RS16190 PF00005 ABC transporter C4J93_RS16190 PF02687 FtsX-like permease family C4J93_RS16200 PF13533 Biotin-lipoyl like C4J93_RS16210 PF00005 ABC transporter C4J93_RS16230 PF00005 ABC transporter C4J93_RS16230 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J93_RS16240 PF00296 Luciferase-like monooxygenase C4J93_RS16250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS16250 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS16250 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS16270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4J93_RS16270 PF13244 Domain of unknown function (DUF4040) C4J93_RS16270 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C4J93_RS16270 PF00361 Proton-conducting membrane transporter C4J93_RS16275 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C4J93_RS16280 PF00361 Proton-conducting membrane transporter C4J93_RS16290 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C4J93_RS16295 PF03334 Na+/H+ antiporter subunit C4J93_RS16305 PF01406 tRNA synthetases class I (C) catalytic domain C4J93_RS16305 PF09190 DALR domain C4J93_RS16310 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C4J93_RS16310 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4J93_RS16315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C4J93_RS16320 PF00149 Calcineurin-like phosphoesterase C4J93_RS16325 PF07690 Major Facilitator Superfamily C4J93_RS16330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS16330 PF00529 HlyD membrane-fusion protein of T1SS C4J93_RS16335 PF02321 Outer membrane efflux protein C4J93_RS16340 PF01047 MarR family C4J93_RS16345 PF04357 TamB, inner membrane protein subunit of TAM complex C4J93_RS16350 PF17243 POTRA domain TamA domain 1 C4J93_RS16350 PF01103 Surface antigen C4J93_RS16350 PF07244 Surface antigen variable number repeat C4J93_RS16360 PF03372 Endonuclease/Exonuclease/phosphatase family C4J93_RS16365 PF12849 PBP superfamily domain C4J93_RS16370 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS16370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS16370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS16375 PF03466 LysR substrate binding domain C4J93_RS16380 PF13411 MerR HTH family regulatory protein C4J93_RS16385 PF00682 HMGL-like C4J93_RS16395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS16395 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS16395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS16400 PF01039 Carboxyl transferase domain C4J93_RS16410 PF00289 Biotin carboxylase, N-terminal domain C4J93_RS16410 PF00364 Biotin-requiring enzyme C4J93_RS16410 PF02785 Biotin carboxylase C-terminal domain C4J93_RS16410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J93_RS16425 PF00246 Zinc carboxypeptidase C4J93_RS16425 PF18027 Cytosolic carboxypeptidase N-terminal domain C4J93_RS16430 PF01292 Prokaryotic cytochrome b561 C4J93_RS16440 PF04542 Sigma-70 region 2 C4J93_RS16440 PF08281 Sigma-70, region 4 C4J93_RS16450 PF03969 AFG1-like ATPase C4J93_RS16460 PF01709 Transcriptional regulator C4J93_RS16465 PF03466 LysR substrate binding domain C4J93_RS16465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS16470 PF00266 Aminotransferase class-V C4J93_RS16480 PF01292 Prokaryotic cytochrome b561 C4J93_RS16490 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS16490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J93_RS16495 PF00795 Carbon-nitrogen hydrolase C4J93_RS16500 PF12833 Helix-turn-helix domain C4J93_RS16500 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J93_RS16510 PF01047 MarR family C4J93_RS16515 PF00456 Transketolase, thiamine diphosphate binding domain C4J93_RS16515 PF17831 Pyruvate dehydrogenase E1 component middle domain C4J93_RS16525 PF06965 Na+/H+ antiporter 1 C4J93_RS16530 PF05698 Bacterial trigger factor protein (TF) C-terminus C4J93_RS16535 PF00216 Bacterial DNA-binding protein C4J93_RS16540 PF00004 ATPase family associated with various cellular activities (AAA) C4J93_RS16540 PF02190 ATP-dependent protease La (LON) substrate-binding domain C4J93_RS16540 PF05362 Lon protease (S16) C-terminal proteolytic domain C4J93_RS16545 PF06689 ClpX C4-type zinc finger C4J93_RS16545 PF10431 C-terminal, D2-small domain, of ClpB protein C4J93_RS16545 PF07724 AAA domain (Cdc48 subfamily) C4J93_RS16550 PF00574 Clp protease C4J93_RS16555 PF05698 Bacterial trigger factor protein (TF) C-terminus C4J93_RS16555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J93_RS16555 PF05697 Bacterial trigger factor protein (TF) C4J93_RS16580 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C4J93_RS16580 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C4J93_RS16585 PF13006 Insertion element 4 transposase N-terminal C4J93_RS16585 PF01609 Transposase DDE domain C4J93_RS16585 PF01609 Transposase DDE domain C4J93_RS16585 PF13006 Insertion element 4 transposase N-terminal C4J93_RS16590 PF01757 Acyltransferase family C4J93_RS16595 PF01757 Acyltransferase family C4J93_RS16615 PF00768 D-alanyl-D-alanine carboxypeptidase C4J93_RS16630 PF00873 AcrB/AcrD/AcrF family C4J93_RS16635 PF13533 Biotin-lipoyl like C4J93_RS16640 PF02321 Outer membrane efflux protein C4J93_RS16650 PF01546 Peptidase family M20/M25/M40 C4J93_RS16650 PF07687 Peptidase dimerisation domain C4J93_RS16655 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J93_RS16660 PF01979 Amidohydrolase family C4J93_RS16665 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS16665 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4J93_RS16665 PF13247 4Fe-4S dicluster domain C4J93_RS16670 PF01180 Dihydroorotate dehydrogenase C4J93_RS16675 PF08362 YcdC-like protein, C-terminal region C4J93_RS16675 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS16680 PF04234 CopC domain C4J93_RS16690 PF03573 outer membrane porin, OprD family C4J93_RS16695 PF01370 NAD dependent epimerase/dehydratase family C4J93_RS16700 PF08450 SMP-30/Gluconolactonase/LRE-like region C4J93_RS16705 PF03480 Bacterial extracellular solute-binding protein, family 7 C4J93_RS16715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C4J93_RS16725 PF13533 Biotin-lipoyl like C4J93_RS16750 PF00753 Metallo-beta-lactamase superfamily C4J93_RS16755 PF01037 Lrp/AsnC ligand binding domain C4J93_RS16760 PF00676 Dehydrogenase E1 component C4J93_RS16760 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal C4J93_RS16765 PF02780 Transketolase, C-terminal domain C4J93_RS16765 PF02779 Transketolase, pyrimidine binding domain C4J93_RS16770 PF00364 Biotin-requiring enzyme C4J93_RS16770 PF02817 e3 binding domain C4J93_RS16770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4J93_RS16775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J93_RS16775 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS16780 PF01063 Amino-transferase class IV C4J93_RS16785 PF00583 Acetyltransferase (GNAT) family C4J93_RS16810 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) C4J93_RS16820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J93_RS16825 PF12704 MacB-like periplasmic core domain C4J93_RS16825 PF00005 ABC transporter C4J93_RS16825 PF02687 FtsX-like permease family C4J93_RS16840 PF07729 FCD domain C4J93_RS16840 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS16850 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS16860 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J93_RS16860 PF00005 ABC transporter C4J93_RS16865 PF00005 ABC transporter C4J93_RS16870 PF07687 Peptidase dimerisation domain C4J93_RS16870 PF01546 Peptidase family M20/M25/M40 C4J93_RS16875 PF01425 Amidase C4J93_RS16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS16880 PF03466 LysR substrate binding domain C4J93_RS16885 PF00356 Bacterial regulatory proteins, lacI family C4J93_RS16885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J93_RS16895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J93_RS16895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J93_RS16900 PF00107 Zinc-binding dehydrogenase C4J93_RS16900 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS16905 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS16910 PF00005 ABC transporter C4J93_RS16915 PF13407 Periplasmic binding protein domain C4J93_RS16935 PF00005 ABC transporter C4J93_RS16945 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C4J93_RS16950 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C4J93_RS16955 PF00005 ABC transporter C4J93_RS16995 PF03466 LysR substrate binding domain C4J93_RS16995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS17000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS17000 PF03466 LysR substrate binding domain C4J93_RS17005 PF02798 Glutathione S-transferase, N-terminal domain C4J93_RS17020 PF00156 Phosphoribosyl transferase domain C4J93_RS17035 PF00248 Aldo/keto reductase family C4J93_RS17060 PF01042 Endoribonuclease L-PSP C4J93_RS17065 PF01593 Flavin containing amine oxidoreductase C4J93_RS17070 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS17075 PF00005 ABC transporter C4J93_RS17080 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS17085 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS17085 PF00593 TonB dependent receptor C4J93_RS17090 PF03958 Bacterial type II/III secretion system short domain C4J93_RS17090 PF00263 Bacterial type II and III secretion system protein C4J93_RS17105 PF05137 Fimbrial assembly protein (PilN) C4J93_RS17110 PF03934 Type II secretion system (T2SS), protein K C4J93_RS17125 PF07963 Prokaryotic N-terminal methylation motif C4J93_RS17125 PF12019 Type II transport protein GspH C4J93_RS17130 PF08334 Type II secretion system (T2SS), protein G C4J93_RS17135 PF00482 Type II secretion system (T2SS), protein F C4J93_RS17140 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C4J93_RS17140 PF00437 Type II/IV secretion system protein C4J93_RS17175 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C4J93_RS17210 PF00216 Bacterial DNA-binding protein C4J93_RS17215 PF01588 Putative tRNA binding domain C4J93_RS17215 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C4J93_RS17215 PF03484 tRNA synthetase B5 domain C4J93_RS17215 PF03147 Ferredoxin-fold anticodon binding domain C4J93_RS17215 PF03483 B3/4 domain C4J93_RS17220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C4J93_RS17220 PF01409 tRNA synthetases class II core domain (F) C4J93_RS17225 PF00453 Ribosomal protein L20 C4J93_RS17230 PF01632 Ribosomal protein L35 C4J93_RS17235 PF00707 Translation initiation factor IF-3, C-terminal domain C4J93_RS17235 PF05198 Translation initiation factor IF-3, N-terminal domain C4J93_RS17240 PF03129 Anticodon binding domain C4J93_RS17240 PF02824 TGS domain C4J93_RS17240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4J93_RS17240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J93_RS17250 PF00313 'Cold-shock' DNA-binding domain C4J93_RS17270 PF01156 Inosine-uridine preferring nucleoside hydrolase C4J93_RS17275 PF05025 RbsD / FucU transport protein family C4J93_RS17280 PF00294 pfkB family carbohydrate kinase C4J93_RS17285 PF00356 Bacterial regulatory proteins, lacI family C4J93_RS17290 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS17295 PF00005 ABC transporter C4J93_RS17300 PF13407 Periplasmic binding protein domain C4J93_RS17305 PF00710 Asparaginase, N-terminal C4J93_RS17305 PF17763 Glutaminase/Asparaginase C-terminal domain C4J93_RS17315 PF04231 Endonuclease I C4J93_RS17325 PF02599 Global regulator protein family C4J93_RS17335 PF13419 Haloacid dehalogenase-like hydrolase C4J93_RS17345 PF00072 Response regulator receiver domain C4J93_RS17345 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS17350 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS17350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS17350 PF00672 HAMP domain C4J93_RS17405 PF01381 Helix-turn-helix C4J93_RS17445 PF01266 FAD dependent oxidoreductase C4J93_RS17470 PF01053 Cys/Met metabolism PLP-dependent enzyme C4J93_RS17475 PF00156 Phosphoribosyl transferase domain C4J93_RS17480 PF02674 Colicin V production protein C4J93_RS17485 PF05036 Sporulation related domain C4J93_RS17490 PF02875 Mur ligase family, glutamate ligase domain C4J93_RS17490 PF08245 Mur ligase middle domain C4J93_RS17495 PF17848 Acetyl-coA carboxylase zinc finger domain C4J93_RS17495 PF01039 Carboxyl transferase domain C4J93_RS17500 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C4J93_RS17505 PF01416 tRNA pseudouridine synthase C4J93_RS17515 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4J93_RS17515 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4J93_RS17520 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4J93_RS17520 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4J93_RS17525 PF00180 Isocitrate/isopropylmalate dehydrogenase C4J93_RS17530 PF08241 Methyltransferase domain C4J93_RS17535 PF00694 Aconitase C-terminal domain C4J93_RS17540 PF00330 Aconitase family (aconitate hydratase) C4J93_RS17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS17550 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS17550 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS17550 PF00563 EAL domain C4J93_RS17565 PF01207 Dihydrouridine synthase (Dus) C4J93_RS17575 PF00561 alpha/beta hydrolase fold C4J93_RS17605 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4J93_RS17610 PF17757 UvrB interaction domain C4J93_RS17610 PF12344 Ultra-violet resistance protein B C4J93_RS17610 PF02151 UvrB/uvrC motif C4J93_RS17610 PF00271 Helicase conserved C-terminal domain C4J93_RS17610 PF04851 Type III restriction enzyme, res subunit C4J93_RS17615 PF00155 Aminotransferase class I and II C4J93_RS17625 PF03466 LysR substrate binding domain C4J93_RS17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS17630 PF00171 Aldehyde dehydrogenase family C4J93_RS17640 PF01447 Thermolysin metallopeptidase, catalytic domain C4J93_RS17640 PF02868 Thermolysin metallopeptidase, alpha-helical domain C4J93_RS17640 PF16485 Protealysin propeptide C4J93_RS17650 PF01497 Periplasmic binding protein C4J93_RS17655 PF01032 FecCD transport family C4J93_RS17660 PF00005 ABC transporter C4J93_RS17665 PF08448 PAS fold C4J93_RS17665 PF13426 PAS domain C4J93_RS17665 PF00072 Response regulator receiver domain C4J93_RS17665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS17665 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS17675 PF03073 TspO/MBR family C4J93_RS17710 PF03466 LysR substrate binding domain C4J93_RS17710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS17715 PF01042 Endoribonuclease L-PSP C4J93_RS17720 PF00561 alpha/beta hydrolase fold C4J93_RS17760 PF04134 Protein of unknown function, DUF393 C4J93_RS17785 PF00083 Sugar (and other) transporter C4J93_RS17795 PF00324 Amino acid permease C4J93_RS17820 PF00672 HAMP domain C4J93_RS17820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS17825 PF04816 tRNA (adenine(22)-N(1))-methyltransferase C4J93_RS17830 PF07729 FCD domain C4J93_RS17830 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS17835 PF07690 Major Facilitator Superfamily C4J93_RS17840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J93_RS17840 PF13378 Enolase C-terminal domain-like C4J93_RS17870 PF04143 Sulphur transport C4J93_RS17880 PF03466 LysR substrate binding domain C4J93_RS17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS17885 PF01070 FMN-dependent dehydrogenase C4J93_RS17890 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS17900 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS17900 PF08448 PAS fold C4J93_RS17900 PF00563 EAL domain C4J93_RS17905 PF00005 ABC transporter C4J93_RS17905 PF00664 ABC transporter transmembrane region C4J93_RS17915 PF00581 Rhodanese-like domain C4J93_RS17915 PF17773 UPF0176 acylphosphatase like domain C4J93_RS17920 PF14431 YwqJ-like deaminase C4J93_RS17920 PF18807 Tripartite Tc toxins repeat C4J93_RS17925 PF03538 Salmonella virulence plasmid 28.1kDa A protein C4J93_RS17935 PF12256 Insecticide toxin TcdB middle/N-terminal region C4J93_RS17935 PF12255 Insecticide toxin TcdB middle/C-terminal region C4J93_RS17935 PF03534 Salmonella virulence plasmid 65kDa B protein C4J93_RS17940 PF05785 Rho-activating domain of cytotoxic necrotizing factor C4J93_RS17940 PF18807 Tripartite Tc toxins repeat C4J93_RS17945 PF01722 BolA-like protein C4J93_RS17955 PF00206 Lyase C4J93_RS17955 PF10415 Fumarase C C-terminus C4J93_RS17960 PF00892 EamA-like transporter family C4J93_RS17975 PF00419 Fimbrial protein C4J93_RS17980 PF00419 Fimbrial protein C4J93_RS17995 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J93_RS17995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J93_RS18020 PF02803 Thiolase, C-terminal domain C4J93_RS18020 PF00108 Thiolase, N-terminal domain C4J93_RS18025 PF03976 Polyphosphate kinase 2 (PPK2) C4J93_RS18030 PF01266 FAD dependent oxidoreductase C4J93_RS18030 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C4J93_RS18035 PF13537 Glutamine amidotransferase domain C4J93_RS18035 PF00733 Asparagine synthase C4J93_RS18040 PF08443 RimK-like ATP-grasp domain C4J93_RS18040 PF02875 Mur ligase family, glutamate ligase domain C4J93_RS18040 PF08245 Mur ligase middle domain C4J93_RS18045 PF05343 M42 glutamyl aminopeptidase C4J93_RS18050 PF06794 Uncharacterised protein family (UPF0270) C4J93_RS18055 PF02599 Global regulator protein family C4J93_RS18060 PF00106 short chain dehydrogenase C4J93_RS18060 PF00561 alpha/beta hydrolase fold C4J93_RS18070 PF00884 Sulfatase C4J93_RS18095 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS18095 PF03472 Autoinducer binding domain C4J93_RS18100 PF03079 ARD/ARD' family C4J93_RS18110 PF01264 Chorismate synthase C4J93_RS18115 PF13026 Protein of unknown function (DUF3887) C4J93_RS18115 PF12146 Serine aminopeptidase, S33 C4J93_RS18125 PF05175 Methyltransferase small domain C4J93_RS18140 PF01713 Smr domain C4J93_RS18145 PF01227 GTP cyclohydrolase I C4J93_RS18165 PF03600 Citrate transporter C4J93_RS18170 PF03466 LysR substrate binding domain C4J93_RS18170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS18180 PF02798 Glutathione S-transferase, N-terminal domain C4J93_RS18185 PF00860 Permease family C4J93_RS18195 PF00576 HIUase/Transthyretin family C4J93_RS18205 PF01522 Polysaccharide deacetylase C4J93_RS18210 PF09349 OHCU decarboxylase C4J93_RS18210 PF01014 Uricase C4J93_RS18215 PF03561 Allantoicase repeat C4J93_RS18220 PF04115 Ureidoglycolate lyase C4J93_RS18230 PF00860 Permease family C4J93_RS18245 PF03279 Bacterial lipid A biosynthesis acyltransferase C4J93_RS18250 PF05209 Septum formation inhibitor MinC, N-terminal domain C4J93_RS18250 PF03775 Septum formation inhibitor MinC, C-terminal domain C4J93_RS18255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J93_RS18260 PF03776 Septum formation topological specificity factor MinE C4J93_RS18265 PF00849 RNA pseudouridylate synthase C4J93_RS18270 PF02127 Aminopeptidase I zinc metalloprotease (M18) C4J93_RS18275 PF00924 Mechanosensitive ion channel C4J93_RS18280 PF03621 MbtH-like protein C4J93_RS18285 PF00202 Aminotransferase class-III C4J93_RS18295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS18295 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS18300 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS18300 PF00072 Response regulator receiver domain C4J93_RS18305 PF11412 Disulphide bond corrector protein DsbC C4J93_RS18305 PF02683 Cytochrome C biogenesis protein transmembrane region C4J93_RS18310 PF00578 AhpC/TSA family C4J93_RS18325 PF00668 Condensation domain C4J93_RS18325 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS18325 PF00668 Condensation domain C4J93_RS18325 PF00501 AMP-binding enzyme C4J93_RS18325 PF00501 AMP-binding enzyme C4J93_RS18325 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS18325 PF00550 Phosphopantetheine attachment site C4J93_RS18325 PF00550 Phosphopantetheine attachment site C4J93_RS18330 PF00975 Thioesterase domain C4J93_RS18340 PF01609 Transposase DDE domain C4J93_RS18355 PF17932 Tetracyclin repressor-like, C-terminal domain C4J93_RS18355 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS18365 PF06865 Pyrimidine/purine nucleoside phosphorylase C4J93_RS18385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS18385 PF07730 Histidine kinase C4J93_RS18385 PF05231 MASE1 C4J93_RS18390 PF00072 Response regulator receiver domain C4J93_RS18390 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS18395 PF00781 Diacylglycerol kinase catalytic domain C4J93_RS18405 PF01584 CheW-like domain C4J93_RS18415 PF13614 AAA domain C4J93_RS18420 PF13677 Membrane MotB of proton-channel complex MotA/MotB C4J93_RS18420 PF00691 OmpA family C4J93_RS18430 PF01618 MotA/TolQ/ExbB proton channel family C4J93_RS18435 PF00072 Response regulator receiver domain C4J93_RS18435 PF01339 CheB methylesterase C4J93_RS18440 PF00072 Response regulator receiver domain C4J93_RS18440 PF01627 Hpt domain C4J93_RS18440 PF02895 Signal transducing histidine kinase, homodimeric domain C4J93_RS18440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS18440 PF01584 CheW-like domain C4J93_RS18445 PF04344 Chemotaxis phosphatase, CheZ C4J93_RS18450 PF00072 Response regulator receiver domain C4J93_RS18455 PF04545 Sigma-70, region 4 C4J93_RS18455 PF04539 Sigma-70 region 3 C4J93_RS18455 PF04542 Sigma-70 region 2 C4J93_RS18460 PF10609 NUBPL iron-transfer P-loop NTPase C4J93_RS18465 PF00448 SRP54-type protein, GTPase domain C4J93_RS18470 PF00771 FHIPEP family C4J93_RS18485 PF01312 FlhB HrpN YscU SpaS Family C4J93_RS18490 PF01311 Bacterial export proteins, family 1 C4J93_RS18495 PF01313 Bacterial export proteins, family 3 C4J93_RS18500 PF00813 FliP family C4J93_RS18505 PF04347 Flagellar biosynthesis protein, FliO C4J93_RS18510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J93_RS18515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J93_RS18515 PF02154 Flagellar motor switch protein FliM C4J93_RS18535 PF00072 Response regulator receiver domain C4J93_RS18535 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS18540 PF13466 STAS domain C4J93_RS18550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J93_RS18550 PF18269 T3SS EscN ATPase C-terminal domain C4J93_RS18560 PF14842 FliG N-terminal domain C4J93_RS18560 PF14841 FliG middle domain C4J93_RS18560 PF01706 FliG C-terminal domain C4J93_RS18565 PF08345 Flagellar M-ring protein C-terminal C4J93_RS18565 PF01514 Secretory protein of YscJ/FliF family C4J93_RS18570 PF02049 Flagellar hook-basal body complex protein FliE C4J93_RS18575 PF00158 Sigma-54 interaction domain C4J93_RS18575 PF00072 Response regulator receiver domain C4J93_RS18575 PF02954 Bacterial regulatory protein, Fis family C4J93_RS18580 PF13188 PAS domain C4J93_RS18580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS18580 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS18585 PF06490 Flagellar regulatory protein FleQ C4J93_RS18585 PF02954 Bacterial regulatory protein, Fis family C4J93_RS18585 PF00158 Sigma-54 interaction domain C4J93_RS18595 PF02561 Flagellar protein FliS C4J93_RS18600 PF07196 Flagellin hook IN motif C4J93_RS18600 PF02465 Flagellar hook-associated protein 2 N-terminus C4J93_RS18600 PF07195 Flagellar hook-associated protein 2 C-terminus C4J93_RS18610 PF07196 Flagellin hook IN motif C4J93_RS18610 PF00700 Bacterial flagellin C-terminal helical region C4J93_RS18610 PF00669 Bacterial flagellin N-terminal helical region C4J93_RS18615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C4J93_RS18615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C4J93_RS18625 PF00460 Flagella basal body rod protein C4J93_RS18625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J93_RS18630 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C4J93_RS18630 PF10135 Rod binding protein C4J93_RS18635 PF02119 Flagellar P-ring protein C4J93_RS18640 PF02107 Flagellar L-ring protein C4J93_RS18645 PF00460 Flagella basal body rod protein C4J93_RS18645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J93_RS18650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J93_RS18650 PF00460 Flagella basal body rod protein C4J93_RS18655 PF00665 Integrase core domain C4J93_RS18660 PF00158 Sigma-54 interaction domain C4J93_RS18660 PF18024 Helix-turn-helix domain C4J93_RS18665 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C4J93_RS18670 PF01329 Pterin 4 alpha carbinolamine dehydratase C4J93_RS18675 PF00155 Aminotransferase class I and II C4J93_RS18685 PF12833 Helix-turn-helix domain C4J93_RS18685 PF12852 Cupin C4J93_RS18700 PF01734 Patatin-like phospholipase C4J93_RS18705 PF01047 MarR family C4J93_RS18710 PF00271 Helicase conserved C-terminal domain C4J93_RS18710 PF00570 HRDC domain C4J93_RS18710 PF09382 RQC domain C4J93_RS18710 PF00270 DEAD/DEAH box helicase C4J93_RS18710 PF16124 RecQ zinc-binding C4J93_RS18720 PF04304 Protein of unknown function (DUF454) C4J93_RS18725 PF00072 Response regulator receiver domain C4J93_RS18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS18725 PF01627 Hpt domain C4J93_RS18725 PF00672 HAMP domain C4J93_RS18725 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS18730 PF02646 RmuC family C4J93_RS18760 PF00255 Glutathione peroxidase C4J93_RS18775 PF02654 Cobalamin-5-phosphate synthase C4J93_RS18780 PF00300 Histidine phosphatase superfamily (branch 1) C4J93_RS18785 PF02277 Phosphoribosyltransferase C4J93_RS18790 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C4J93_RS18795 PF07685 CobB/CobQ-like glutamine amidotransferase domain C4J93_RS18795 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J93_RS18800 PF00155 Aminotransferase class I and II C4J93_RS18805 PF17113 Regulatory signalling modulator protein AmpE C4J93_RS18805 PF03186 CobD/Cbib protein C4J93_RS18810 PF00881 Nitroreductase family C4J93_RS18815 PF07685 CobB/CobQ-like glutamine amidotransferase domain C4J93_RS18815 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J93_RS18820 PF12557 Cob(I)alamin adenosyltransferase N terminal C4J93_RS18820 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C4J93_RS18825 PF07995 Glucose / Sorbosone dehydrogenase C4J93_RS18830 PF00877 NlpC/P60 family C4J93_RS18835 PF00877 NlpC/P60 family C4J93_RS18840 PF00308 Bacterial dnaA protein C4J93_RS18845 PF01594 AI-2E family transporter C4J93_RS18855 PF02769 AIR synthase related protein, C-terminal domain C4J93_RS18855 PF00586 AIR synthase related protein, N-terminal domain C4J93_RS18860 PF00551 Formyl transferase C4J93_RS18880 PF06276 Ferric iron reductase FhuF-like transporter C4J93_RS18880 PF04183 IucA / IucC family C4J93_RS18885 PF07690 Major Facilitator Superfamily C4J93_RS18890 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS18890 PF00593 TonB dependent receptor C4J93_RS18895 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) C4J93_RS18900 PF03819 MazG nucleotide pyrophosphohydrolase domain C4J93_RS18905 PF13291 ACT domain C4J93_RS18905 PF04607 Region found in RelA / SpoT proteins C4J93_RS18905 PF02824 TGS domain C4J93_RS18910 PF01938 TRAM domain C4J93_RS18910 PF05958 tRNA (Uracil-5-)-methyltransferase C4J93_RS18915 PF00291 Pyridoxal-phosphate dependent enzyme C4J93_RS18925 PF03466 LysR substrate binding domain C4J93_RS18925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS18930 PF00491 Arginase family C4J93_RS18945 PF00474 Sodium:solute symporter family C4J93_RS18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS18955 PF03466 LysR substrate binding domain C4J93_RS18965 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J93_RS18975 PF17783 CvfB-like winged helix domain C4J93_RS18975 PF13509 S1 domain C4J93_RS19005 PF00270 DEAD/DEAH box helicase C4J93_RS19005 PF00271 Helicase conserved C-terminal domain C4J93_RS19010 PF01209 ubiE/COQ5 methyltransferase family C4J93_RS19035 PF00892 EamA-like transporter family C4J93_RS19040 PF02525 Flavodoxin-like fold C4J93_RS19055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C4J93_RS19060 PF00005 ABC transporter C4J93_RS19060 PF00664 ABC transporter transmembrane region C4J93_RS19085 PF08281 Sigma-70, region 4 C4J93_RS19085 PF04542 Sigma-70 region 2 C4J93_RS19090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C4J93_RS19090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C4J93_RS19095 PF04408 Helicase associated domain (HA2) C4J93_RS19095 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C4J93_RS19095 PF11898 Domain of unknown function (DUF3418) C4J93_RS19095 PF00271 Helicase conserved C-terminal domain C4J93_RS19095 PF00270 DEAD/DEAH box helicase C4J93_RS19110 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C4J93_RS19120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS19120 PF08447 PAS fold C4J93_RS19135 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J93_RS19150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J93_RS19150 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C4J93_RS19155 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J93_RS19170 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C4J93_RS19170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J93_RS19185 PF12801 4Fe-4S binding domain C4J93_RS19185 PF13746 4Fe-4S dicluster domain C4J93_RS19185 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C4J93_RS19195 PF00403 Heavy-metal-associated domain C4J93_RS19210 PF06969 HemN C-terminal domain C4J93_RS19210 PF04055 Radical SAM superfamily C4J93_RS19220 PF13545 Crp-like helix-turn-helix domain C4J93_RS19220 PF00027 Cyclic nucleotide-binding domain C4J93_RS19225 PF00156 Phosphoribosyl transferase domain C4J93_RS19230 PF02132 RecR protein C4J93_RS19230 PF13662 Toprim domain C4J93_RS19235 PF16884 N-terminal domain of oxidoreductase C4J93_RS19235 PF00107 Zinc-binding dehydrogenase C4J93_RS19240 PF02575 YbaB/EbfC DNA-binding family C4J93_RS19245 PF12169 DNA polymerase III subunits gamma and tau domain III C4J93_RS19245 PF12170 DNA polymerase III tau subunit V interacting with alpha C4J93_RS19245 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C4J93_RS19270 PF15887 Putative zinc-binding metallo-peptidase C4J93_RS19270 PF10005 zinc-ribbon domain C4J93_RS19275 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C4J93_RS19275 PF12826 Helix-hairpin-helix motif C4J93_RS19275 PF03120 NAD-dependent DNA ligase OB-fold domain C4J93_RS19275 PF01653 NAD-dependent DNA ligase adenylation domain C4J93_RS19275 PF00533 BRCA1 C Terminus (BRCT) domain C4J93_RS19280 PF04354 ZipA, C-terminal FtsZ-binding domain C4J93_RS19285 PF02463 RecF/RecN/SMC N terminal domain C4J93_RS19295 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J93_RS19295 PF01799 [2Fe-2S] binding domain C4J93_RS19300 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C4J93_RS19300 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J93_RS19310 PF01979 Amidohydrolase family C4J93_RS19315 PF07729 FCD domain C4J93_RS19315 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS19320 PF03594 Benzoate membrane transport protein C4J93_RS19325 PF04320 Protein with unknown function (DUF469) C4J93_RS19335 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS19340 PF01170 Putative RNA methylase family UPF0020 C4J93_RS19340 PF02926 THUMP domain C4J93_RS19340 PF10672 S-adenosylmethionine-dependent methyltransferase C4J93_RS19345 PF04957 Ribosome modulation factor C4J93_RS19350 PF01180 Dihydroorotate dehydrogenase C4J93_RS19355 PF01464 Transglycosylase SLT domain C4J93_RS19360 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS19365 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J93_RS19370 PF03958 Bacterial type II/III secretion system short domain C4J93_RS19370 PF00263 Bacterial type II and III secretion system protein C4J93_RS19375 PF00005 ABC transporter C4J93_RS19380 PF03861 ANTAR domain C4J93_RS19380 PF08376 Nitrate and nitrite sensing C4J93_RS19385 PF07690 Major Facilitator Superfamily C4J93_RS19390 PF13191 AAA ATPase domain C4J93_RS19390 PF00069 Protein kinase domain C4J93_RS19395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4J93_RS19395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4J93_RS19395 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS19395 PF18267 Rubredoxin NAD+ reductase C-terminal domain C4J93_RS19395 PF04324 BFD-like [2Fe-2S] binding domain C4J93_RS19400 PF00355 Rieske [2Fe-2S] domain C4J93_RS19405 PF01568 Molydopterin dinucleotide binding domain C4J93_RS19405 PF00384 Molybdopterin oxidoreductase C4J93_RS19405 PF04324 BFD-like [2Fe-2S] binding domain C4J93_RS19405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4J93_RS19410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J93_RS19415 PF00691 OmpA family C4J93_RS19415 PF05736 OprF membrane domain C4J93_RS19435 PF01544 CorA-like Mg2+ transporter protein C4J93_RS19440 PF03737 Aldolase/RraA C4J93_RS19450 PF00391 PEP-utilising enzyme, mobile domain C4J93_RS19450 PF02896 PEP-utilising enzyme, TIM barrel domain C4J93_RS19450 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C4J93_RS19455 PF03618 Kinase/pyrophosphorylase C4J93_RS19465 PF00665 Integrase core domain C4J93_RS19470 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS19470 PF00155 Aminotransferase class I and II C4J93_RS19475 PF00892 EamA-like transporter family C4J93_RS19480 PF00899 ThiF family C4J93_RS19480 PF00581 Rhodanese-like domain C4J93_RS19485 PF00291 Pyridoxal-phosphate dependent enzyme C4J93_RS19490 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS19495 PF02272 DHHA1 domain C4J93_RS19495 PF01411 tRNA synthetases class II (A) C4J93_RS19495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J93_RS19505 PF03972 MmgE/PrpD family C4J93_RS19510 PF04303 PrpF protein C4J93_RS19515 PF00330 Aconitase family (aconitate hydratase) C4J93_RS19515 PF00694 Aconitase C-terminal domain C4J93_RS19520 PF00285 Citrate synthase, C-terminal domain C4J93_RS19530 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS19530 PF07729 FCD domain C4J93_RS19535 PF18030 RimK PreATP-grasp domain C4J93_RS19535 PF08443 RimK-like ATP-grasp domain C4J93_RS19545 PF18030 RimK PreATP-grasp domain C4J93_RS19545 PF08443 RimK-like ATP-grasp domain C4J93_RS19550 PF00425 chorismate binding enzyme C4J93_RS19550 PF04715 Anthranilate synthase component I, N terminal region C4J93_RS19565 PF01507 Phosphoadenosine phosphosulfate reductase family C4J93_RS19570 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J93_RS19575 PF01177 Asp/Glu/Hydantoin racemase C4J93_RS19580 PF03466 LysR substrate binding domain C4J93_RS19580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS19590 PF13419 Haloacid dehalogenase-like hydrolase C4J93_RS19620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C4J93_RS19620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C4J93_RS19620 PF02805 Metal binding domain of Ada C4J93_RS19620 PF12833 Helix-turn-helix domain C4J93_RS19625 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA C4J93_RS19630 PF00360 Phytochrome region C4J93_RS19630 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS19630 PF01590 GAF domain C4J93_RS19630 PF00563 EAL domain C4J93_RS19645 PF01553 Acyltransferase C4J93_RS19650 PF01544 CorA-like Mg2+ transporter protein C4J93_RS19655 PF00117 Glutamine amidotransferase class-I C4J93_RS19655 PF00958 GMP synthase C terminal domain C4J93_RS19655 PF02540 NAD synthase C4J93_RS19660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J93_RS19660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J93_RS19660 PF00378 Enoyl-CoA hydratase/isomerase C4J93_RS19665 PF02803 Thiolase, C-terminal domain C4J93_RS19665 PF00108 Thiolase, N-terminal domain C4J93_RS19675 PF01841 Transglutaminase-like superfamily C4J93_RS19675 PF08379 Bacterial transglutaminase-like N-terminal region C4J93_RS19680 PF04168 A predicted alpha-helical domain with a conserved ER motif. C4J93_RS19680 PF14403 Circularly permuted ATP-grasp type 2 C4J93_RS19685 PF14403 Circularly permuted ATP-grasp type 2 C4J93_RS19700 PF01852 START domain C4J93_RS19705 PF03692 Putative zinc- or iron-chelating domain C4J93_RS19715 PF00155 Aminotransferase class I and II C4J93_RS19715 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS19720 PF00691 OmpA family C4J93_RS19720 PF05736 OprF membrane domain C4J93_RS19735 PF00766 Electron transfer flavoprotein FAD-binding domain C4J93_RS19735 PF01012 Electron transfer flavoprotein domain C4J93_RS19740 PF01012 Electron transfer flavoprotein domain C4J93_RS19750 PF12833 Helix-turn-helix domain C4J93_RS19750 PF06719 AraC-type transcriptional regulator N-terminus C4J93_RS19755 PF00107 Zinc-binding dehydrogenase C4J93_RS19755 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS19760 PF01614 Bacterial transcriptional regulator C4J93_RS19760 PF09339 IclR helix-turn-helix domain C4J93_RS19765 PF02653 Branched-chain amino acid transport system / permease component C4J93_RS19770 PF00005 ABC transporter C4J93_RS19775 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J93_RS19805 PF00294 pfkB family carbohydrate kinase C4J93_RS19815 PF03747 ADP-ribosylglycohydrolase C4J93_RS19820 PF07702 UTRA domain C4J93_RS19820 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS19835 PF04055 Radical SAM superfamily C4J93_RS19835 PF06463 Molybdenum Cofactor Synthesis C C4J93_RS19840 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS19845 PF01026 TatD related DNase C4J93_RS19850 PF09115 DNA polymerase III, delta subunit, C terminal C4J93_RS19855 PF02223 Thymidylate kinase C4J93_RS19860 PF02618 YceG-like family C4J93_RS19865 PF01063 Amino-transferase class IV C4J93_RS19870 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J93_RS19870 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J93_RS19875 PF00550 Phosphopantetheine attachment site C4J93_RS19885 PF00698 Acyl transferase domain C4J93_RS19890 PF02504 Fatty acid synthesis protein C4J93_RS19895 PF01783 Ribosomal L32p protein family C4J93_RS19900 PF02620 Large ribosomal RNA subunit accumulation protein YceD C4J93_RS19905 PF02545 Maf-like protein C4J93_RS19910 PF06965 Na+/H+ antiporter 1 C4J93_RS19910 PF01343 Peptidase family S49 C4J93_RS19915 PF13419 Haloacid dehalogenase-like hydrolase C4J93_RS19920 PF01479 S4 domain C4J93_RS19920 PF00849 RNA pseudouridylate synthase C4J93_RS19930 PF12804 MobA-like NTP transferase domain C4J93_RS19930 PF14602 Hexapeptide repeat of succinyl-transferase C4J93_RS19930 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS19935 PF02625 XdhC and CoxI family C4J93_RS19935 PF13478 XdhC Rossmann domain C4J93_RS19940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J93_RS19945 PF01799 [2Fe-2S] binding domain C4J93_RS19945 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J93_RS19950 PF00375 Sodium:dicarboxylate symporter family C4J93_RS19955 PF02311 AraC-like ligand binding domain C4J93_RS19955 PF12833 Helix-turn-helix domain C4J93_RS19960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS19965 PF00072 Response regulator receiver domain C4J93_RS19965 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS19975 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C4J93_RS19975 PF01648 4'-phosphopantetheinyl transferase superfamily C4J93_RS19980 PF00672 HAMP domain C4J93_RS19980 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS19980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS19985 PF00072 Response regulator receiver domain C4J93_RS19985 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS19990 PF03477 ATP cone domain C4J93_RS19990 PF00317 Ribonucleotide reductase, all-alpha domain C4J93_RS19990 PF02867 Ribonucleotide reductase, barrel domain C4J93_RS20000 PF07559 Flagellar basal body protein FlaE C4J93_RS20000 PF00460 Flagella basal body rod protein C4J93_RS20000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J93_RS20005 PF13861 FlgD Tudor-like domain C4J93_RS20005 PF13860 FlgD Ig-like domain C4J93_RS20005 PF03963 Flagellar hook capping protein - N-terminal region C4J93_RS20010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J93_RS20010 PF00460 Flagella basal body rod protein C4J93_RS20015 PF00460 Flagella basal body rod protein C4J93_RS20020 PF01739 CheR methyltransferase, SAM binding domain C4J93_RS20020 PF03705 CheR methyltransferase, all-alpha domain C4J93_RS20025 PF01584 CheW-like domain C4J93_RS20025 PF00072 Response regulator receiver domain C4J93_RS20045 PF07238 PilZ domain C4J93_RS20045 PF07317 Flagellar regulator YcgR C4J93_RS20050 PF07690 Major Facilitator Superfamily C4J93_RS20100 PF03869 Arc-like DNA binding domain C4J93_RS20105 PF01769 Divalent cation transporter C4J93_RS20105 PF00571 CBS domain C4J93_RS20105 PF03448 MgtE intracellular N domain C4J93_RS20110 PF01609 Transposase DDE domain C4J93_RS20110 PF13006 Insertion element 4 transposase N-terminal C4J93_RS20110 PF01609 Transposase DDE domain C4J93_RS20110 PF13006 Insertion element 4 transposase N-terminal C4J93_RS20130 PF02599 Global regulator protein family C4J93_RS20135 PF00696 Amino acid kinase family C4J93_RS20135 PF13840 ACT domain C4J93_RS20135 PF01842 ACT domain C4J93_RS20140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J93_RS20140 PF01411 tRNA synthetases class II (A) C4J93_RS20140 PF02272 DHHA1 domain C4J93_RS20145 PF01212 Beta-eliminating lyase C4J93_RS20150 PF00885 6,7-dimethyl-8-ribityllumazine synthase C4J93_RS20155 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C4J93_RS20165 PF04996 Succinylarginine dihydrolase C4J93_RS20170 PF00171 Aldehyde dehydrogenase family C4J93_RS20175 PF04958 Arginine N-succinyltransferase beta subunit C4J93_RS20180 PF04958 Arginine N-succinyltransferase beta subunit C4J93_RS20185 PF00202 Aminotransferase class-III C4J93_RS20200 PF12833 Helix-turn-helix domain C4J93_RS20205 PF00005 ABC transporter C4J93_RS20215 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS20220 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS20225 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS20235 PF00501 AMP-binding enzyme C4J93_RS20235 PF16177 Acetyl-coenzyme A synthetase N-terminus C4J93_RS20235 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS20245 PF00268 Ribonucleotide reductase, small chain C4J93_RS20280 PF01425 Amidase C4J93_RS20290 PF12706 Beta-lactamase superfamily domain C4J93_RS20300 PF13426 PAS domain C4J93_RS20300 PF08447 PAS fold C4J93_RS20300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS20315 PF00117 Glutamine amidotransferase class-I C4J93_RS20315 PF06418 CTP synthase N-terminus C4J93_RS20320 PF03992 Antibiotic biosynthesis monooxygenase C4J93_RS20350 PF01384 Phosphate transporter family C4J93_RS20355 PF03466 LysR substrate binding domain C4J93_RS20355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS20370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS20370 PF03466 LysR substrate binding domain C4J93_RS20375 PF08281 Sigma-70, region 4 C4J93_RS20375 PF04542 Sigma-70 region 2 C4J93_RS20380 PF03795 YCII-related domain C4J93_RS20400 PF13657 HipA N-terminal domain C4J93_RS20400 PF07804 HipA-like C-terminal domain C4J93_RS20410 PF00155 Aminotransferase class I and II C4J93_RS20420 PF02447 GntP family permease C4J93_RS20430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J93_RS20430 PF00356 Bacterial regulatory proteins, lacI family C4J93_RS20445 PF00083 Sugar (and other) transporter C4J93_RS20455 PF03466 LysR substrate binding domain C4J93_RS20455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS20460 PF02798 Glutathione S-transferase, N-terminal domain C4J93_RS20460 PF00043 Glutathione S-transferase, C-terminal domain C4J93_RS20465 PF09084 NMT1/THI5 like C4J93_RS20475 PF01327 Polypeptide deformylase C4J93_RS20480 PF03631 Virulence factor BrkB C4J93_RS20495 PF00501 AMP-binding enzyme C4J93_RS20495 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS20500 PF00501 AMP-binding enzyme C4J93_RS20500 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS20510 PF01575 MaoC like domain C4J93_RS20520 PF12843 Putative quorum-sensing-regulated virulence factor C4J93_RS20525 PF00266 Aminotransferase class-V C4J93_RS20530 PF01081 KDPG and KHG aldolase C4J93_RS20535 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C4J93_RS20545 PF01380 SIS domain C4J93_RS20545 PF01418 Helix-turn-helix domain, rpiR family C4J93_RS20550 PF01263 Aldose 1-epimerase C4J93_RS20555 PF04966 Carbohydrate-selective porin, OprB family C4J93_RS20560 PF17912 MalK OB fold domain C4J93_RS20560 PF00005 ABC transporter C4J93_RS20560 PF03459 TOBE domain C4J93_RS20565 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS20570 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS20575 PF01547 Bacterial extracellular solute-binding protein C4J93_RS20590 PF01370 NAD dependent epimerase/dehydratase family C4J93_RS20595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS20595 PF03466 LysR substrate binding domain C4J93_RS20605 PF01810 LysE type translocator C4J93_RS20610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C4J93_RS20610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C4J93_RS20620 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS20620 PF00563 EAL domain C4J93_RS20620 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS20630 PF02386 Cation transport protein C4J93_RS20635 PF12833 Helix-turn-helix domain C4J93_RS20635 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J93_RS20650 PF07690 Major Facilitator Superfamily C4J93_RS20655 PF00472 RF-1 domain C4J93_RS20660 PF00324 Amino acid permease C4J93_RS20670 PF01479 S4 domain C4J93_RS20670 PF00849 RNA pseudouridylate synthase C4J93_RS20680 PF04079 Segregation and condensation complex subunit ScpB C4J93_RS20685 PF02616 Segregation and condensation protein ScpA C4J93_RS20690 PF01300 Telomere recombination C4J93_RS20695 PF02811 PHP domain C4J93_RS20700 PF04279 Intracellular septation protein A C4J93_RS20705 PF03795 YCII-related domain C4J93_RS20715 PF00072 Response regulator receiver domain C4J93_RS20715 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS20725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS20725 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS20725 PF08521 Two-component sensor kinase N-terminal C4J93_RS20730 PF02515 CoA-transferase family III C4J93_RS20740 PF13520 Amino acid permease C4J93_RS20750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4J93_RS20750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4J93_RS20755 PF00696 Amino acid kinase family C4J93_RS20765 PF00158 Sigma-54 interaction domain C4J93_RS20765 PF18024 Helix-turn-helix domain C4J93_RS20770 PF01597 Glycine cleavage H-protein C4J93_RS20775 PF02347 Glycine cleavage system P-protein C4J93_RS20780 PF03313 Serine dehydratase alpha chain C4J93_RS20780 PF03315 Serine dehydratase beta chain C4J93_RS20785 PF01571 Aminomethyltransferase folate-binding domain C4J93_RS20785 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4J93_RS20790 PF00313 'Cold-shock' DNA-binding domain C4J93_RS20800 PF02445 Quinolinate synthetase A protein C4J93_RS20810 PF00501 AMP-binding enzyme C4J93_RS20810 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS20810 PF07993 Male sterility protein C4J93_RS20810 PF00668 Condensation domain C4J93_RS20810 PF00550 Phosphopantetheine attachment site C4J93_RS20830 PF07690 Major Facilitator Superfamily C4J93_RS20835 PF13533 Biotin-lipoyl like C4J93_RS20840 PF02321 Outer membrane efflux protein C4J93_RS20850 PF08502 LeuA allosteric (dimerisation) domain C4J93_RS20850 PF00682 HMGL-like C4J93_RS20860 PF04055 Radical SAM superfamily C4J93_RS20865 PF13525 Outer membrane lipoprotein C4J93_RS20865 PF16331 TolA binding protein trimerisation C4J93_RS20870 PF00691 OmpA family C4J93_RS20875 PF04052 TolB amino-terminal domain C4J93_RS20875 PF07676 WD40-like Beta Propeller Repeat C4J93_RS20885 PF02472 Biopolymer transport protein ExbD/TolR C4J93_RS20890 PF01618 MotA/TolQ/ExbB proton channel family C4J93_RS20895 PF03061 Thioesterase superfamily C4J93_RS20905 PF17864 RuvB AAA lid domain C4J93_RS20905 PF05491 RuvB C-terminal winged helix domain C4J93_RS20905 PF05496 Holliday junction DNA helicase RuvB P-loop domain C4J93_RS20910 PF01330 RuvA N terminal domain C4J93_RS20910 PF07499 RuvA, C-terminal domain C4J93_RS20915 PF02075 Crossover junction endodeoxyribonuclease RuvC C4J93_RS20925 PF01709 Transcriptional regulator C4J93_RS20930 PF00152 tRNA synthetases class II (D, K and N) C4J93_RS20930 PF01336 OB-fold nucleic acid binding domain C4J93_RS20930 PF02938 GAD domain C4J93_RS20945 PF00210 Ferritin-like domain C4J93_RS20950 PF00313 'Cold-shock' DNA-binding domain C4J93_RS20955 PF04102 SlyX C4J93_RS20965 PF03573 outer membrane porin, OprD family C4J93_RS20970 PF05552 Conserved TM helix C4J93_RS20970 PF00924 Mechanosensitive ion channel C4J93_RS20975 PF04461 Protein of unknown function (DUF520) C4J93_RS20980 PF08546 Ketopantoate reductase PanE/ApbA C terminal C4J93_RS20980 PF02558 Ketopantoate reductase PanE/ApbA C4J93_RS20985 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS20985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS20985 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS20990 PF01923 Cobalamin adenosyltransferase C4J93_RS20995 PF00293 NUDIX domain C4J93_RS21000 PF01960 ArgJ family C4J93_RS21005 PF01043 SecA preprotein cross-linking domain C4J93_RS21005 PF07516 SecA Wing and Scaffold domain C4J93_RS21005 PF02810 SEC-C motif C4J93_RS21005 PF07517 SecA DEAD-like domain C4J93_RS21015 PF05872 Bacterial protein of unknown function (DUF853) C4J93_RS21020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS21020 PF00672 HAMP domain C4J93_RS21020 PF02743 Cache domain C4J93_RS21025 PF00534 Glycosyl transferases group 1 C4J93_RS21025 PF13439 Glycosyltransferase Family 4 C4J93_RS21040 PF00551 Formyl transferase C4J93_RS21050 PF00929 Exonuclease C4J93_RS21050 PF08411 Exonuclease C-terminal C4J93_RS21075 PF17863 AAA lid domain C4J93_RS21075 PF07726 ATPase family associated with various cellular activities (AAA) C4J93_RS21095 PF00224 Pyruvate kinase, barrel domain C4J93_RS21095 PF02887 Pyruvate kinase, alpha/beta domain C4J93_RS21100 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J93_RS21105 PF05681 Fumarate hydratase (Fumerase) C4J93_RS21105 PF05683 Fumarase C-terminus C4J93_RS21110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS21110 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS21115 PF00072 Response regulator receiver domain C4J93_RS21115 PF00158 Sigma-54 interaction domain C4J93_RS21115 PF02954 Bacterial regulatory protein, Fis family C4J93_RS21120 PF00083 Sugar (and other) transporter C4J93_RS21140 PF12833 Helix-turn-helix domain C4J93_RS21140 PF06719 AraC-type transcriptional regulator N-terminus C4J93_RS21145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS21145 PF00672 HAMP domain C4J93_RS21145 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS21150 PF00072 Response regulator receiver domain C4J93_RS21150 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS21155 PF02685 Glucokinase C4J93_RS21160 PF00920 Dehydratase family C4J93_RS21165 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4J93_RS21165 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4J93_RS21170 PF08281 Sigma-70, region 4 C4J93_RS21170 PF04542 Sigma-70 region 2 C4J93_RS21180 PF00593 TonB dependent receptor C4J93_RS21180 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS21185 PF01126 Heme oxygenase C4J93_RS21190 PF04304 Protein of unknown function (DUF454) C4J93_RS21195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS21195 PF00672 HAMP domain C4J93_RS21200 PF01037 Lrp/AsnC ligand binding domain C4J93_RS21205 PF00850 Histone deacetylase domain C4J93_RS21210 PF02423 Ornithine cyclodeaminase/mu-crystallin family C4J93_RS21215 PF00324 Amino acid permease C4J93_RS21240 PF13533 Biotin-lipoyl like C4J93_RS21245 PF00873 AcrB/AcrD/AcrF family C4J93_RS21265 PF00672 HAMP domain C4J93_RS21265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS21265 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS21270 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS21270 PF00072 Response regulator receiver domain C4J93_RS21275 PF00884 Sulfatase C4J93_RS21285 PF00118 TCP-1/cpn60 chaperonin family C4J93_RS21290 PF00166 Chaperonin 10 Kd subunit C4J93_RS21295 PF04186 FxsA cytoplasmic membrane protein C4J93_RS21315 PF07690 Major Facilitator Superfamily C4J93_RS21320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4J93_RS21320 PF03129 Anticodon binding domain C4J93_RS21320 PF04073 Aminoacyl-tRNA editing domain C4J93_RS21330 PF11798 IMS family HHH motif C4J93_RS21330 PF00817 impB/mucB/samB family C4J93_RS21350 PF09924 Uncharacterised conserved protein (DUF2156) C4J93_RS21350 PF03706 Lysylphosphatidylglycerol synthase TM region C4J93_RS21360 PF01368 DHH family C4J93_RS21360 PF02272 DHHA1 domain C4J93_RS21360 PF17768 RecJ OB domain C4J93_RS21365 PF07152 YaeQ protein C4J93_RS21380 PF00291 Pyridoxal-phosphate dependent enzyme C4J93_RS21380 PF14821 Threonine synthase N terminus C4J93_RS21385 PF03447 Homoserine dehydrogenase, NAD binding domain C4J93_RS21385 PF01842 ACT domain C4J93_RS21385 PF00742 Homoserine dehydrogenase C4J93_RS21390 PF13098 Thioredoxin-like domain C4J93_RS21390 PF10411 Disulfide bond isomerase protein N-terminus C4J93_RS21395 PF02899 Phage integrase, N-terminal SAM-like domain C4J93_RS21395 PF00589 Phage integrase family C4J93_RS21405 PF01245 Ribosomal protein L19 C4J93_RS21410 PF01746 tRNA (Guanine-1)-methyltransferase C4J93_RS21415 PF01782 RimM N-terminal domain C4J93_RS21415 PF05239 PRC-barrel domain C4J93_RS21420 PF00886 Ribosomal protein S16 C4J93_RS21425 PF02881 SRP54-type protein, helical bundle domain C4J93_RS21425 PF02978 Signal peptide binding domain C4J93_RS21425 PF00448 SRP54-type protein, GTPase domain C4J93_RS21435 PF01595 Cyclin M transmembrane N-terminal domain C4J93_RS21435 PF00571 CBS domain C4J93_RS21435 PF03471 Transporter associated domain C4J93_RS21440 PF00083 Sugar (and other) transporter C4J93_RS21440 PF07690 Major Facilitator Superfamily C4J93_RS21445 PF02222 ATP-grasp domain C4J93_RS21460 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS21465 PF00293 NUDIX domain C4J93_RS21470 PF00293 NUDIX domain C4J93_RS21470 PF09297 NADH pyrophosphatase zinc ribbon domain C4J93_RS21480 PF07702 UTRA domain C4J93_RS21480 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS21485 PF01979 Amidohydrolase family C4J93_RS21490 PF01380 SIS domain C4J93_RS21495 PF00381 PTS HPr component phosphorylation site C4J93_RS21495 PF00391 PEP-utilising enzyme, mobile domain C4J93_RS21495 PF05524 PEP-utilising enzyme, N-terminal C4J93_RS21495 PF02896 PEP-utilising enzyme, TIM barrel domain C4J93_RS21495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C4J93_RS21500 PF02378 Phosphotransferase system, EIIC C4J93_RS21500 PF00367 phosphotransferase system, EIIB C4J93_RS21500 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C4J93_RS21515 PF01784 NIF3 (NGG1p interacting factor 3) C4J93_RS21520 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C4J93_RS21520 PF02769 AIR synthase related protein, C-terminal domain C4J93_RS21520 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C4J93_RS21525 PF01464 Transglycosylase SLT domain C4J93_RS21525 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS21600 PF02463 RecF/RecN/SMC N terminal domain C4J93_RS21605 PF00732 GMC oxidoreductase C4J93_RS21605 PF05199 GMC oxidoreductase C4J93_RS21610 PF03466 LysR substrate binding domain C4J93_RS21610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS21625 PF03358 NADPH-dependent FMN reductase C4J93_RS21650 PF00589 Phage integrase family C4J93_RS21650 PF13356 Arm DNA-binding domain C4J93_RS21655 PF02540 NAD synthase C4J93_RS21655 PF00958 GMP synthase C terminal domain C4J93_RS21655 PF00117 Glutamine amidotransferase class-I C4J93_RS21660 PF00478 IMP dehydrogenase / GMP reductase domain C4J93_RS21660 PF00571 CBS domain C4J93_RS21675 PF13742 OB-fold nucleic acid binding domain C4J93_RS21675 PF02601 Exonuclease VII, large subunit C4J93_RS21680 PF01551 Peptidase family M23 C4J93_RS21680 PF08525 Opacity-associated protein A N-terminal motif C4J93_RS21680 PF01476 LysM domain C4J93_RS21690 PF08502 LeuA allosteric (dimerisation) domain C4J93_RS21690 PF00682 HMGL-like C4J93_RS21695 PF00795 Carbon-nitrogen hydrolase C4J93_RS21700 PF00155 Aminotransferase class I and II C4J93_RS21705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C4J93_RS21705 PF01926 50S ribosome-binding GTPase C4J93_RS21710 PF13360 PQQ-like domain C4J93_RS21720 PF03129 Anticodon binding domain C4J93_RS21720 PF13393 Histidyl-tRNA synthetase C4J93_RS21725 PF04551 GcpE protein C4J93_RS21730 PF13464 Domain of unknown function (DUF4115) C4J93_RS21740 PF04055 Radical SAM superfamily C4J93_RS21745 PF00334 Nucleoside diphosphate kinase C4J93_RS21750 PF04384 Iron-sulphur cluster assembly C4J93_RS21755 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J93_RS21760 PF00012 Hsp70 protein C4J93_RS21765 PF07743 HSCB C-terminal oligomerisation domain C4J93_RS21765 PF00226 DnaJ domain C4J93_RS21770 PF01521 Iron-sulphur cluster biosynthesis C4J93_RS21775 PF01592 NifU-like N terminal domain C4J93_RS21780 PF00266 Aminotransferase class-V C4J93_RS21785 PF02082 Transcriptional regulator C4J93_RS21790 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS21795 PF00588 SpoU rRNA Methylase family C4J93_RS21800 PF00459 Inositol monophosphatase family C4J93_RS21805 PF05433 Glycine zipper 2TM domain C4J93_RS21810 PF07549 SecD/SecF GG Motif C4J93_RS21810 PF02355 Protein export membrane protein C4J93_RS21815 PF07549 SecD/SecF GG Motif C4J93_RS21815 PF02355 Protein export membrane protein C4J93_RS21815 PF13721 SecD export protein N-terminal TM region C4J93_RS21820 PF02699 Preprotein translocase subunit C4J93_RS21825 PF01702 Queuine tRNA-ribosyltransferase C4J93_RS21830 PF02547 Queuosine biosynthesis protein C4J93_RS21865 PF00384 Molybdopterin oxidoreductase C4J93_RS21895 PF01810 LysE type translocator C4J93_RS21910 PF01810 LysE type translocator C4J93_RS21915 PF08000 Bacterial PH domain C4J93_RS21925 PF12728 Helix-turn-helix domain C4J93_RS21935 PF03513 Cloacin immunity protein C4J93_RS21945 PF00034 Cytochrome c C4J93_RS21960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS21960 PF01590 GAF domain C4J93_RS21960 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS21960 PF00360 Phytochrome region C4J93_RS21960 PF08446 PAS fold C4J93_RS21965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS21965 PF00672 HAMP domain C4J93_RS21965 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS21970 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS21970 PF00072 Response regulator receiver domain C4J93_RS21975 PF04333 MlaA lipoprotein C4J93_RS21990 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS21990 PF08448 PAS fold C4J93_RS22000 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4J93_RS22005 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system C4J93_RS22015 PF00266 Aminotransferase class-V C4J93_RS22020 PF07690 Major Facilitator Superfamily C4J93_RS22040 PF03472 Autoinducer binding domain C4J93_RS22040 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS22045 PF00155 Aminotransferase class I and II C4J93_RS22050 PF06508 Queuosine biosynthesis protein QueC C4J93_RS22055 PF01040 UbiA prenyltransferase family C4J93_RS22060 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C4J93_RS22065 PF00510 Cytochrome c oxidase subunit III C4J93_RS22070 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J93_RS22075 PF06481 COX Aromatic Rich Motif C4J93_RS22075 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4J93_RS22085 PF02600 Disulfide bond formation protein DsbB C4J93_RS22090 PF00175 Oxidoreductase NAD-binding domain C4J93_RS22090 PF00042 Globin C4J93_RS22090 PF00970 Oxidoreductase FAD-binding domain C4J93_RS22095 PF02954 Bacterial regulatory protein, Fis family C4J93_RS22095 PF00158 Sigma-54 interaction domain C4J93_RS22105 PF12833 Helix-turn-helix domain C4J93_RS22105 PF06445 GyrI-like small molecule binding domain C4J93_RS22110 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS22110 PF00072 Response regulator receiver domain C4J93_RS22115 PF07044 Protein of unknown function (DUF1329) C4J93_RS22125 PF00106 short chain dehydrogenase C4J93_RS22130 PF00561 alpha/beta hydrolase fold C4J93_RS22135 PF00596 Class II Aldolase and Adducin N-terminal domain C4J93_RS22140 PF00258 Flavodoxin C4J93_RS22145 PF13426 PAS domain C4J93_RS22145 PF01740 STAS domain C4J93_RS22155 PF13411 MerR HTH family regulatory protein C4J93_RS22170 PF01227 GTP cyclohydrolase I C4J93_RS22175 PF02152 Dihydroneopterin aldolase C4J93_RS22190 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS22205 PF00534 Glycosyl transferases group 1 C4J93_RS22205 PF13439 Glycosyltransferase Family 4 C4J93_RS22210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J93_RS22210 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS22215 PF00255 Glutathione peroxidase C4J93_RS22220 PF05981 CreA protein C4J93_RS22225 PF00696 Amino acid kinase family C4J93_RS22225 PF01472 PUA domain C4J93_RS22230 PF01926 50S ribosome-binding GTPase C4J93_RS22230 PF01018 GTP1/OBG C4J93_RS22235 PF01016 Ribosomal L27 protein C4J93_RS22240 PF00829 Ribosomal prokaryotic L21 protein C4J93_RS22245 PF00348 Polyprenyl synthetase C4J93_RS22250 PF03831 PhnA domain C4J93_RS22250 PF08274 PhnA Zinc-Ribbon C4J93_RS22255 PF12804 MobA-like NTP transferase domain C4J93_RS22255 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS22260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J93_RS22260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J93_RS22265 PF00672 HAMP domain C4J93_RS22265 PF16591 Helical bimodular sensor domain C4J93_RS22265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS22275 PF07969 Amidohydrolase family C4J93_RS22280 PF01380 SIS domain C4J93_RS22285 PF02447 GntP family permease C4J93_RS22295 PF00916 Sulfate permease family C4J93_RS22295 PF01740 STAS domain C4J93_RS22305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS22305 PF03466 LysR substrate binding domain C4J93_RS22315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS22315 PF03466 LysR substrate binding domain C4J93_RS22320 PF00324 Amino acid permease C4J93_RS22325 PF00266 Aminotransferase class-V C4J93_RS22330 PF01037 Lrp/AsnC ligand binding domain C4J93_RS22335 PF00775 Dioxygenase C4J93_RS22335 PF04444 Catechol dioxygenase N terminus C4J93_RS22345 PF13378 Enolase C-terminal domain-like C4J93_RS22345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J93_RS22350 PF03466 LysR substrate binding domain C4J93_RS22350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS22355 PF14525 AraC-binding-like domain C4J93_RS22355 PF12833 Helix-turn-helix domain C4J93_RS22360 PF00355 Rieske [2Fe-2S] domain C4J93_RS22360 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4J93_RS22365 PF00866 Ring hydroxylating beta subunit C4J93_RS22370 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J93_RS22370 PF00175 Oxidoreductase NAD-binding domain C4J93_RS22370 PF00970 Oxidoreductase FAD-binding domain C4J93_RS22375 PF00324 Amino acid permease C4J93_RS22380 PF03301 Tryptophan 2,3-dioxygenase C4J93_RS22385 PF04199 Putative cyclase C4J93_RS22400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4J93_RS22400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C4J93_RS22405 PF00171 Aldehyde dehydrogenase family C4J93_RS22410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS22410 PF03466 LysR substrate binding domain C4J93_RS22430 PF00563 EAL domain C4J93_RS22430 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS22430 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS22440 PF13538 UvrD-like helicase C-terminal domain C4J93_RS22445 PF13361 UvrD-like helicase C-terminal domain C4J93_RS22445 PF00580 UvrD/REP helicase N-terminal domain C4J93_RS22445 PF12705 PD-(D/E)XK nuclease superfamily C4J93_RS22450 PF17946 RecC C-terminal domain C4J93_RS22485 PF01794 Ferric reductase like transmembrane component C4J93_RS22490 PF00174 Oxidoreductase molybdopterin binding domain C4J93_RS22495 PF01066 CDP-alcohol phosphatidyltransferase C4J93_RS22500 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C4J93_RS22500 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C4J93_RS22505 PF10369 Small subunit of acetolactate synthase C4J93_RS22510 PF00205 Thiamine pyrophosphate enzyme, central domain C4J93_RS22510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J93_RS22510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J93_RS22515 PF04287 tRNA pseudouridine synthase C C4J93_RS22525 PF00912 Transglycosylase C4J93_RS22525 PF00905 Penicillin binding protein transpeptidase domain C4J93_RS22525 PF14814 Bifunctional transglycosylase second domain C4J93_RS22545 PF00005 ABC transporter C4J93_RS22550 PF01032 FecCD transport family C4J93_RS22555 PF01497 Periplasmic binding protein C4J93_RS22565 PF03749 Sugar fermentation stimulation protein RE domain C4J93_RS22565 PF17746 SfsA N-terminal OB domain C4J93_RS22570 PF00155 Aminotransferase class I and II C4J93_RS22575 PF01258 Prokaryotic dksA/traR C4-type zinc finger C4J93_RS22580 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4J93_RS22590 PF00989 PAS fold C4J93_RS22590 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS22590 PF08447 PAS fold C4J93_RS22590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS22595 PF02954 Bacterial regulatory protein, Fis family C4J93_RS22595 PF00158 Sigma-54 interaction domain C4J93_RS22595 PF00072 Response regulator receiver domain C4J93_RS22600 PF12626 Polymerase A arginine-rich C-terminus C4J93_RS22600 PF01743 Poly A polymerase head domain C4J93_RS22600 PF12627 Probable RNA and SrmB- binding site of polymerase A C4J93_RS22605 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C4J93_RS22610 PF02548 Ketopantoate hydroxymethyltransferase C4J93_RS22615 PF02569 Pantoate-beta-alanine ligase C4J93_RS22620 PF00342 Phosphoglucose isomerase C4J93_RS22625 PF13193 AMP-binding enzyme C-terminal domain C4J93_RS22625 PF16177 Acetyl-coenzyme A synthetase N-terminus C4J93_RS22625 PF00501 AMP-binding enzyme C4J93_RS22630 PF10672 S-adenosylmethionine-dependent methyltransferase C4J93_RS22630 PF17785 PUA-like domain C4J93_RS22640 PF04972 BON domain C4J93_RS22645 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C4J93_RS22645 PF00013 KH domain C4J93_RS22645 PF03725 3' exoribonuclease family, domain 2 C4J93_RS22645 PF01138 3' exoribonuclease family, domain 1 C4J93_RS22645 PF00575 S1 RNA binding domain C4J93_RS22650 PF00312 Ribosomal protein S15 C4J93_RS22655 PF01509 TruB family pseudouridylate synthase (N terminal domain) C4J93_RS22655 PF16198 tRNA pseudouridylate synthase B C-terminal domain C4J93_RS22655 PF09157 Pseudouridine synthase II TruB, C-terminal C4J93_RS22660 PF02033 Ribosome-binding factor A C4J93_RS22665 PF11987 Translation-initiation factor 2 C4J93_RS22665 PF08364 Bacterial translation initiation factor IF-2 associated region C4J93_RS22665 PF00009 Elongation factor Tu GTP binding domain C4J93_RS22665 PF04760 Translation initiation factor IF-2, N-terminal region C4J93_RS22670 PF00575 S1 RNA binding domain C4J93_RS22670 PF08529 NusA N-terminal domain C4J93_RS22670 PF13184 NusA-like KH domain C4J93_RS22675 PF17384 RimP C-terminal SH3 domain C4J93_RS22675 PF02576 RimP N-terminal domain C4J93_RS22690 PF03840 Preprotein translocase SecG subunit C4J93_RS22695 PF00121 Triosephosphate isomerase C4J93_RS22700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4J93_RS22700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4J93_RS22700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4J93_RS22700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4J93_RS22705 PF00809 Pterin binding enzyme C4J93_RS22710 PF06480 FtsH Extracellular C4J93_RS22710 PF01434 Peptidase family M41 C4J93_RS22710 PF17862 AAA+ lid domain C4J93_RS22710 PF00004 ATPase family associated with various cellular activities (AAA) C4J93_RS22715 PF01728 FtsJ-like methyltransferase C4J93_RS22720 PF01985 CRS1 / YhbY (CRM) domain C4J93_RS22730 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J93_RS22730 PF03449 Transcription elongation factor, N-terminal C4J93_RS22735 PF02142 MGS-like domain C4J93_RS22735 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C4J93_RS22735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J93_RS22740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C4J93_RS22740 PF00117 Glutamine amidotransferase class-I C4J93_RS22745 PF01113 Dihydrodipicolinate reductase, N-terminus C4J93_RS22745 PF05173 Dihydrodipicolinate reductase, C-terminus C4J93_RS22750 PF00684 DnaJ central domain C4J93_RS22750 PF01556 DnaJ C terminal domain C4J93_RS22750 PF00226 DnaJ domain C4J93_RS22755 PF00012 Hsp70 protein C4J93_RS22760 PF01025 GrpE C4J93_RS22765 PF02463 RecF/RecN/SMC N terminal domain C4J93_RS22770 PF01475 Ferric uptake regulator family C4J93_RS22775 PF04355 SmpA / OmlA family C4J93_RS22780 PF03658 RnfH family Ubiquitin C4J93_RS22785 PF03364 Polyketide cyclase / dehydrase and lipid transport C4J93_RS22790 PF01668 SmpB protein C4J93_RS22795 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS22795 PF07729 FCD domain C4J93_RS22800 PF02652 L-lactate permease C4J93_RS22840 PF00072 Response regulator receiver domain C4J93_RS22840 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS22845 PF01048 Phosphorylase superfamily C4J93_RS22860 PF06463 Molybdenum Cofactor Synthesis C C4J93_RS22860 PF04055 Radical SAM superfamily C4J93_RS22865 PF01062 Bestrophin, RFP-TM, chloride channel C4J93_RS22870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS22870 PF03466 LysR substrate binding domain C4J93_RS22880 PF03350 Uncharacterized protein family, UPF0114 C4J93_RS22895 PF13654 AAA domain C4J93_RS22895 PF05362 Lon protease (S16) C-terminal proteolytic domain C4J93_RS22915 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J93_RS22915 PF03449 Transcription elongation factor, N-terminal C4J93_RS22920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C4J93_RS22920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C4J93_RS22935 PF07690 Major Facilitator Superfamily C4J93_RS22940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS22940 PF03466 LysR substrate binding domain C4J93_RS22945 PF12848 ABC transporter C4J93_RS22945 PF00005 ABC transporter C4J93_RS22955 PF00563 EAL domain C4J93_RS22955 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS22955 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS22960 PF00464 Serine hydroxymethyltransferase C4J93_RS22965 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J93_RS22965 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J93_RS22970 PF04328 Selenoprotein, putative C4J93_RS22975 PF02554 Carbon starvation protein CstA C4J93_RS22975 PF13722 5TM C-terminal transporter carbon starvation CstA C4J93_RS22980 PF18073 Rubredoxin metal binding domain C4J93_RS22990 PF00199 Catalase C4J93_RS22990 PF06628 Catalase-related immune-responsive C4J93_RS22995 PF01741 Large-conductance mechanosensitive channel, MscL C4J93_RS23000 PF00175 Oxidoreductase NAD-binding domain C4J93_RS23000 PF00970 Oxidoreductase FAD-binding domain C4J93_RS23005 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS23005 PF03472 Autoinducer binding domain C4J93_RS23010 PF05175 Methyltransferase small domain C4J93_RS23020 PF02322 Cytochrome bd terminal oxidase subunit II C4J93_RS23025 PF01654 Cytochrome bd terminal oxidase subunit I C4J93_RS23035 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J93_RS23035 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C4J93_RS23040 PF03450 CO dehydrogenase flavoprotein C-terminal domain C4J93_RS23040 PF00941 FAD binding domain in molybdopterin dehydrogenase C4J93_RS23045 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J93_RS23045 PF01799 [2Fe-2S] binding domain C4J93_RS23045 PF10518 TAT (twin-arginine translocation) pathway signal sequence C4J93_RS23055 PF00860 Permease family C4J93_RS23060 PF05958 tRNA (Uracil-5-)-methyltransferase C4J93_RS23075 PF01220 Dehydroquinase class II C4J93_RS23080 PF08501 Shikimate dehydrogenase substrate binding domain C4J93_RS23080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C4J93_RS23085 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS23085 PF17938 Tetracyclin repressor-like, C-terminal domain C4J93_RS23090 PF01261 Xylose isomerase-like TIM barrel C4J93_RS23090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J93_RS23095 PF07690 Major Facilitator Superfamily C4J93_RS23110 PF04228 Putative neutral zinc metallopeptidase C4J93_RS23135 PF13302 Acetyltransferase (GNAT) domain C4J93_RS23140 PF00850 Histone deacetylase domain C4J93_RS23145 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS23145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4J93_RS23145 PF13247 4Fe-4S dicluster domain C4J93_RS23150 PF00271 Helicase conserved C-terminal domain C4J93_RS23150 PF00270 DEAD/DEAH box helicase C4J93_RS23155 PF00892 EamA-like transporter family C4J93_RS23165 PF00929 Exonuclease C4J93_RS23165 PF13307 Helicase C-terminal domain C4J93_RS23165 PF04851 Type III restriction enzyme, res subunit C4J93_RS23175 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) C4J93_RS23190 PF01261 Xylose isomerase-like TIM barrel C4J93_RS23205 PF00270 DEAD/DEAH box helicase C4J93_RS23205 PF04408 Helicase associated domain (HA2) C4J93_RS23205 PF00271 Helicase conserved C-terminal domain C4J93_RS23205 PF08482 ATP-dependent helicase C-terminal C4J93_RS23220 PF16916 Dimerisation domain of Zinc Transporter C4J93_RS23220 PF01545 Cation efflux family C4J93_RS23230 PF01037 Lrp/AsnC ligand binding domain C4J93_RS23240 PF00849 RNA pseudouridylate synthase C4J93_RS23245 PF01048 Phosphorylase superfamily C4J93_RS23245 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus C4J93_RS23250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS23250 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS23250 PF18158 Adaptive response protein AidB N-terminal domain C4J93_RS23255 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS23255 PF17149 Periplasmic sensor domain found in signal transduction proteins C4J93_RS23255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS23255 PF01627 Hpt domain C4J93_RS23255 PF00072 Response regulator receiver domain C4J93_RS23255 PF00672 HAMP domain C4J93_RS23260 PF08543 Phosphomethylpyrimidine kinase C4J93_RS23265 PF02581 Thiamine monophosphate synthase C4J93_RS23270 PF00202 Aminotransferase class-III C4J93_RS23285 PF01938 TRAM domain C4J93_RS23285 PF00919 Uncharacterized protein family UPF0004 C4J93_RS23285 PF04055 Radical SAM superfamily C4J93_RS23290 PF02562 PhoH-like protein C4J93_RS23295 PF02130 Uncharacterized protein family UPF0054 C4J93_RS23300 PF00571 CBS domain C4J93_RS23300 PF03471 Transporter associated domain C4J93_RS23305 PF00795 Carbon-nitrogen hydrolase C4J93_RS23320 PF00133 tRNA synthetases class I (I, L, M and V) C4J93_RS23320 PF13603 Leucyl-tRNA synthetase, Domain 2 C4J93_RS23320 PF08264 Anticodon-binding domain of tRNA C4J93_RS23320 PF09334 tRNA synthetases class I (M) C4J93_RS23330 PF06144 DNA polymerase III, delta subunit C4J93_RS23330 PF14840 Processivity clamp loader gamma complex DNA pol III C-term C4J93_RS23340 PF13406 Transglycosylase SLT domain C4J93_RS23345 PF02016 LD-carboxypeptidase N-terminal domain C4J93_RS23345 PF17676 LD-carboxypeptidase C-terminal domain C4J93_RS23350 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C4J93_RS23350 PF04055 Radical SAM superfamily C4J93_RS23355 PF03099 Biotin/lipoate A/B protein ligase family C4J93_RS23360 PF04359 Protein of unknown function (DUF493) C4J93_RS23365 PF00768 D-alanyl-D-alanine carboxypeptidase C4J93_RS23365 PF07943 Penicillin-binding protein 5, C-terminal domain C4J93_RS23370 PF05036 Sporulation related domain C4J93_RS23370 PF03330 Lytic transglycolase C4J93_RS23375 PF13406 Transglycosylase SLT domain C4J93_RS23380 PF01098 Cell cycle protein C4J93_RS23385 PF03717 Penicillin-binding Protein dimerisation domain C4J93_RS23385 PF00905 Penicillin binding protein transpeptidase domain C4J93_RS23390 PF02590 Predicted SPOUT methyltransferase C4J93_RS23400 PF01467 Cytidylyltransferase-like C4J93_RS23405 PF00171 Aldehyde dehydrogenase family C4J93_RS23410 PF02245 Methylpurine-DNA glycosylase (MPG) C4J93_RS23415 PF09335 SNARE associated Golgi protein C4J93_RS23430 PF04172 LrgB-like family C4J93_RS23435 PF03788 LrgA family C4J93_RS23440 PF01575 MaoC like domain C4J93_RS23450 PF13460 NAD(P)H-binding C4J93_RS23465 PF02441 Flavoprotein C4J93_RS23470 PF08245 Mur ligase middle domain C4J93_RS23470 PF02875 Mur ligase family, glutamate ligase domain C4J93_RS23470 PF01225 Mur ligase family, catalytic domain C4J93_RS23475 PF01590 GAF domain C4J93_RS23475 PF02954 Bacterial regulatory protein, Fis family C4J93_RS23475 PF00158 Sigma-54 interaction domain C4J93_RS23480 PF00171 Aldehyde dehydrogenase family C4J93_RS23490 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C4J93_RS23495 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C4J93_RS23500 PF00583 Acetyltransferase (GNAT) family C4J93_RS23505 PF09335 SNARE associated Golgi protein C4J93_RS23510 PF06167 Glucose-regulated metallo-peptidase M90 C4J93_RS23515 PF00719 Inorganic pyrophosphatase C4J93_RS23520 PF01381 Helix-turn-helix C4J93_RS23520 PF00717 Peptidase S24-like C4J93_RS23535 PF00857 Isochorismatase family C4J93_RS23555 PF03527 RHS protein C4J93_RS23555 PF05593 RHS Repeat C4J93_RS23570 PF02661 Fic/DOC family C4J93_RS23575 PF02609 Exonuclease VII small subunit C4J93_RS23580 PF00348 Polyprenyl synthetase C4J93_RS23585 PF02779 Transketolase, pyrimidine binding domain C4J93_RS23585 PF02780 Transketolase, C-terminal domain C4J93_RS23585 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C4J93_RS23590 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS23590 PF00593 TonB dependent receptor C4J93_RS23595 PF01497 Periplasmic binding protein C4J93_RS23605 PF00925 GTP cyclohydrolase II C4J93_RS23615 PF00586 AIR synthase related protein, N-terminal domain C4J93_RS23615 PF02769 AIR synthase related protein, C-terminal domain C4J93_RS23620 PF01029 NusB family C4J93_RS23625 PF00885 6,7-dimethyl-8-ribityllumazine synthase C4J93_RS23630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C4J93_RS23630 PF00925 GTP cyclohydrolase II C4J93_RS23635 PF00677 Lumazine binding domain C4J93_RS23640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C4J93_RS23640 PF01872 RibD C-terminal domain C4J93_RS23645 PF03477 ATP cone domain C4J93_RS23665 PF00085 Thioredoxin C4J93_RS23680 PF00005 ABC transporter C4J93_RS23705 PF08494 DEAD/H associated C4J93_RS23705 PF00271 Helicase conserved C-terminal domain C4J93_RS23705 PF00270 DEAD/DEAH box helicase C4J93_RS23715 PF00924 Mechanosensitive ion channel C4J93_RS23725 PF03372 Endonuclease/Exonuclease/phosphatase family C4J93_RS23730 PF13091 PLD-like domain C4J93_RS23735 PF03706 Lysylphosphatidylglycerol synthase TM region C4J93_RS23750 PF00857 Isochorismatase family C4J93_RS23830 PF00581 Rhodanese-like domain C4J93_RS23835 PF04608 Phosphatidylglycerophosphatase A C4J93_RS23875 PF00436 Single-strand binding protein family C4J93_RS23880 PF07690 Major Facilitator Superfamily C4J93_RS23885 PF17760 UvrA interaction domain C4J93_RS23885 PF17755 UvrA DNA-binding domain C4J93_RS23890 PF00210 Ferritin-like domain C4J93_RS23895 PF00199 Catalase C4J93_RS23895 PF06628 Catalase-related immune-responsive C4J93_RS23900 PF01196 Ribosomal protein L17 C4J93_RS23905 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C4J93_RS23905 PF01000 RNA polymerase Rpb3/RpoA insert domain C4J93_RS23905 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C4J93_RS23910 PF00163 Ribosomal protein S4/S9 N-terminal domain C4J93_RS23910 PF01479 S4 domain C4J93_RS23915 PF00411 Ribosomal protein S11 C4J93_RS23920 PF00416 Ribosomal protein S13/S18 C4J93_RS23925 PF00444 Ribosomal protein L36 C4J93_RS23930 PF00344 SecY translocase C4J93_RS23935 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C4J93_RS23940 PF00327 Ribosomal protein L30p/L7e C4J93_RS23945 PF03719 Ribosomal protein S5, C-terminal domain C4J93_RS23945 PF00333 Ribosomal protein S5, N-terminal domain C4J93_RS23950 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C4J93_RS23955 PF00347 Ribosomal protein L6 C4J93_RS23960 PF00410 Ribosomal protein S8 C4J93_RS23965 PF00253 Ribosomal protein S14p/S29e C4J93_RS23970 PF00673 ribosomal L5P family C-terminus C4J93_RS23970 PF00281 Ribosomal protein L5 C4J93_RS23975 PF00467 KOW motif C4J93_RS23975 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C4J93_RS23980 PF00238 Ribosomal protein L14p/L23e C4J93_RS23985 PF00366 Ribosomal protein S17 C4J93_RS23990 PF00831 Ribosomal L29 protein C4J93_RS23995 PF00252 Ribosomal protein L16p/L10e C4J93_RS24000 PF07650 KH domain C4J93_RS24000 PF00189 Ribosomal protein S3, C-terminal domain C4J93_RS24005 PF00237 Ribosomal protein L22p/L17e C4J93_RS24010 PF00203 Ribosomal protein S19 C4J93_RS24015 PF00181 Ribosomal Proteins L2, RNA binding domain C4J93_RS24015 PF03947 Ribosomal Proteins L2, C-terminal domain C4J93_RS24020 PF00276 Ribosomal protein L23 C4J93_RS24025 PF00573 Ribosomal protein L4/L1 family C4J93_RS24030 PF00297 Ribosomal protein L3 C4J93_RS24035 PF00338 Ribosomal protein S10p/S20e C4J93_RS24040 PF03143 Elongation factor Tu C-terminal domain C4J93_RS24040 PF00009 Elongation factor Tu GTP binding domain C4J93_RS24040 PF03144 Elongation factor Tu domain 2 C4J93_RS24045 PF03764 Elongation factor G, domain IV C4J93_RS24045 PF00009 Elongation factor Tu GTP binding domain C4J93_RS24045 PF14492 Elongation Factor G, domain II C4J93_RS24045 PF03144 Elongation factor Tu domain 2 C4J93_RS24045 PF00679 Elongation factor G C-terminus C4J93_RS24050 PF00177 Ribosomal protein S7p/S5e C4J93_RS24055 PF00164 Ribosomal protein S12/S23 C4J93_RS24060 PF04983 RNA polymerase Rpb1, domain 3 C4J93_RS24060 PF04997 RNA polymerase Rpb1, domain 1 C4J93_RS24060 PF04998 RNA polymerase Rpb1, domain 5 C4J93_RS24060 PF05000 RNA polymerase Rpb1, domain 4 C4J93_RS24060 PF00623 RNA polymerase Rpb1, domain 2 C4J93_RS24065 PF10385 RNA polymerase beta subunit external 1 domain C4J93_RS24065 PF04560 RNA polymerase Rpb2, domain 7 C4J93_RS24065 PF00562 RNA polymerase Rpb2, domain 6 C4J93_RS24065 PF04561 RNA polymerase Rpb2, domain 2 C4J93_RS24065 PF04565 RNA polymerase Rpb2, domain 3 C4J93_RS24065 PF04563 RNA polymerase beta subunit C4J93_RS24070 PF00542 Ribosomal protein L7/L12 C-terminal domain C4J93_RS24070 PF16320 Ribosomal protein L7/L12 dimerisation domain C4J93_RS24075 PF00466 Ribosomal protein L10 C4J93_RS24080 PF00687 Ribosomal protein L1p/L10e family C4J93_RS24085 PF00298 Ribosomal protein L11, RNA binding domain C4J93_RS24085 PF03946 Ribosomal protein L11, N-terminal domain C4J93_RS24090 PF02357 Transcription termination factor nusG C4J93_RS24090 PF00467 KOW motif C4J93_RS24095 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C4J93_RS24125 PF03309 Type III pantothenate kinase C4J93_RS24130 PF08279 HTH domain C4J93_RS24130 PF03099 Biotin/lipoate A/B protein ligase family C4J93_RS24130 PF02237 Biotin protein ligase C terminal domain C4J93_RS24165 PF01479 S4 domain C4J93_RS24165 PF00579 tRNA synthetases class I (W and Y) C4J93_RS24175 PF01551 Peptidase family M23 C4J93_RS24175 PF04225 Opacity-associated protein A LysM-like domain C4J93_RS24180 PF03702 Anhydro-N-acetylmuramic acid kinase C4J93_RS24185 PF01521 Iron-sulphur cluster biosynthesis C4J93_RS24190 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4J93_RS24190 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4J93_RS24195 PF03653 Uncharacterised protein family (UPF0093) C4J93_RS24210 PF00106 short chain dehydrogenase C4J93_RS24215 PF01230 HIT domain C4J93_RS24220 PF03232 Ubiquinone biosynthesis protein COQ7 C4J93_RS24225 PF02566 OsmC-like protein C4J93_RS24230 PF13545 Crp-like helix-turn-helix domain C4J93_RS24230 PF00027 Cyclic nucleotide-binding domain C4J93_RS24240 PF00218 Indole-3-glycerol phosphate synthase C4J93_RS24245 PF00591 Glycosyl transferase family, a/b domain C4J93_RS24245 PF02885 Glycosyl transferase family, helical bundle domain C4J93_RS24250 PF00117 Glutamine amidotransferase class-I C4J93_RS24255 PF03797 Autotransporter beta-domain C4J93_RS24255 PF00657 GDSL-like Lipase/Acylhydrolase C4J93_RS24260 PF04715 Anthranilate synthase component I, N terminal region C4J93_RS24260 PF00425 chorismate binding enzyme C4J93_RS24265 PF13419 Haloacid dehalogenase-like hydrolase C4J93_RS24270 PF00834 Ribulose-phosphate 3 epimerase family C4J93_RS24275 PF00465 Iron-containing alcohol dehydrogenase C4J93_RS24280 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS24285 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS24295 PF08402 TOBE domain C4J93_RS24295 PF00005 ABC transporter C4J93_RS24300 PF00196 Bacterial regulatory proteins, luxR family C4J93_RS24300 PF00072 Response regulator receiver domain C4J93_RS24305 PF05384 Sensor protein DegS C4J93_RS24305 PF07730 Histidine kinase C4J93_RS24305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS24315 PF00226 DnaJ domain C4J93_RS24315 PF05099 Tellurite resistance protein TerB C4J93_RS24320 PF00483 Nucleotidyl transferase C4J93_RS24325 PF01636 Phosphotransferase enzyme family C4J93_RS24330 PF03968 OstA-like protein C4J93_RS24330 PF04453 LPS transport system D C4J93_RS24335 PF09312 SurA N-terminal domain C4J93_RS24335 PF00639 PPIC-type PPIASE domain C4J93_RS24340 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C4J93_RS24345 PF00398 Ribosomal RNA adenine dimethylase C4J93_RS24350 PF04379 ApaG domain C4J93_RS24355 PF00149 Calcineurin-like phosphoesterase C4J93_RS24360 PF00581 Rhodanese-like domain C4J93_RS24365 PF08298 PrkA AAA domain C4J93_RS24365 PF06798 PrkA serine protein kinase C-terminal domain C4J93_RS24370 PF04285 Protein of unknown function (DUF444) C4J93_RS24375 PF04293 SpoVR like protein C4J93_RS24380 PF12627 Probable RNA and SrmB- binding site of polymerase A C4J93_RS24380 PF01743 Poly A polymerase head domain C4J93_RS24380 PF01966 HD domain C4J93_RS24390 PF02152 Dihydroneopterin aldolase C4J93_RS24395 PF02660 Glycerol-3-phosphate acyltransferase C4J93_RS24400 PF00814 Glycoprotease family C4J93_RS24405 PF01165 Ribosomal protein S21 C4J93_RS24415 PF03979 Sigma-70 factor, region 1.1 C4J93_RS24415 PF04539 Sigma-70 region 3 C4J93_RS24415 PF04546 Sigma-70, non-essential region C4J93_RS24415 PF04545 Sigma-70, region 4 C4J93_RS24415 PF04542 Sigma-70 region 2 C4J93_RS24415 PF00140 Sigma-70 factor, region 1.2 C4J93_RS24420 PF00563 EAL domain C4J93_RS24420 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS24420 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS24440 PF01593 Flavin containing amine oxidoreductase C4J93_RS24445 PF00795 Carbon-nitrogen hydrolase C4J93_RS24450 PF00675 Insulinase (Peptidase family M16) C4J93_RS24450 PF05193 Peptidase M16 inactive domain C4J93_RS24455 PF08042 PqqA family C4J93_RS24460 PF12706 Beta-lactamase superfamily domain C4J93_RS24465 PF03070 TENA/THI-4/PQQC family C4J93_RS24470 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C4J93_RS24475 PF13186 Iron-sulfur cluster-binding domain C4J93_RS24475 PF04055 Radical SAM superfamily C4J93_RS24480 PF01679 Proteolipid membrane potential modulator C4J93_RS24485 PF00202 Aminotransferase class-III C4J93_RS24490 PF03466 LysR substrate binding domain C4J93_RS24490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS24495 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J93_RS24495 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS24495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS24495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS24500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS24500 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J93_RS24500 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS24500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS24505 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS24510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J93_RS24510 PF02770 Acyl-CoA dehydrogenase, middle domain C4J93_RS24510 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J93_RS24510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J93_RS24525 PF08241 Methyltransferase domain C4J93_RS24530 PF12697 Alpha/beta hydrolase family C4J93_RS24530 PF08241 Methyltransferase domain C4J93_RS24535 PF00155 Aminotransferase class I and II C4J93_RS24540 PF04055 Radical SAM superfamily C4J93_RS24540 PF06968 Biotin and Thiamin Synthesis associated domain C4J93_RS24545 PF00156 Phosphoribosyl transferase domain C4J93_RS24550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS24550 PF03459 TOBE domain C4J93_RS24560 PF01636 Phosphotransferase enzyme family C4J93_RS24565 PF00892 EamA-like transporter family C4J93_RS24575 PF01274 Malate synthase C4J93_RS24585 PF00072 Response regulator receiver domain C4J93_RS24595 PF00929 Exonuclease C4J93_RS24605 PF04542 Sigma-70 region 2 C4J93_RS24605 PF08281 Sigma-70, region 4 C4J93_RS24615 PF00593 TonB dependent receptor C4J93_RS24615 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS24640 PF06123 Inner membrane protein CreD C4J93_RS24645 PF00672 HAMP domain C4J93_RS24645 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS24645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS24650 PF00072 Response regulator receiver domain C4J93_RS24650 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS24655 PF08443 RimK-like ATP-grasp domain C4J93_RS24655 PF18030 RimK PreATP-grasp domain C4J93_RS24660 PF01553 Acyltransferase C4J93_RS24675 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C4J93_RS24675 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS24680 PF00551 Formyl transferase C4J93_RS24690 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS24690 PF17806 Sarcosine oxidase A3 domain C4J93_RS24690 PF01571 Aminomethyltransferase folate-binding domain C4J93_RS24690 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4J93_RS24695 PF04267 Sarcosine oxidase, delta subunit family C4J93_RS24700 PF01266 FAD dependent oxidoreductase C4J93_RS24705 PF00464 Serine hydroxymethyltransferase C4J93_RS24710 PF05857 TraX protein C4J93_RS24715 PF01212 Beta-eliminating lyase C4J93_RS24725 PF00042 Globin C4J93_RS24725 PF00175 Oxidoreductase NAD-binding domain C4J93_RS24725 PF00970 Oxidoreductase FAD-binding domain C4J93_RS24730 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4J93_RS24730 PF00355 Rieske [2Fe-2S] domain C4J93_RS24740 PF01012 Electron transfer flavoprotein domain C4J93_RS24740 PF00766 Electron transfer flavoprotein FAD-binding domain C4J93_RS24745 PF13183 4Fe-4S dicluster domain C4J93_RS24745 PF02754 Cysteine-rich domain C4J93_RS24750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J93_RS24775 PF01965 DJ-1/PfpI family C4J93_RS24775 PF12833 Helix-turn-helix domain C4J93_RS24785 PF05853 beta-keto acid cleavage enzyme C4J93_RS24790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J93_RS24790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J93_RS24805 PF01965 DJ-1/PfpI family C4J93_RS24805 PF12833 Helix-turn-helix domain C4J93_RS24810 PF01208 Uroporphyrinogen decarboxylase (URO-D) C4J93_RS24815 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4J93_RS24815 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS24820 PF04898 Glutamate synthase central domain C4J93_RS24820 PF01645 Conserved region in glutamate synthase C4J93_RS24820 PF00310 Glutamine amidotransferases class-II C4J93_RS24820 PF01493 GXGXG motif C4J93_RS24835 PF01761 3-dehydroquinate synthase C4J93_RS24840 PF01202 Shikimate kinase C4J93_RS24845 PF11741 AMIN domain C4J93_RS24845 PF00263 Bacterial type II and III secretion system protein C4J93_RS24845 PF07660 Secretin and TonB N terminus short domain C4J93_RS24845 PF03958 Bacterial type II/III secretion system short domain C4J93_RS24860 PF11104 Type IV pilus assembly protein PilM; C4J93_RS24865 PF17092 Penicillin-binding protein OB-like domain C4J93_RS24865 PF00912 Transglycosylase C4J93_RS24865 PF00905 Penicillin binding protein transpeptidase domain C4J93_RS24870 PF03949 Malic enzyme, NAD binding domain C4J93_RS24870 PF00390 Malic enzyme, N-terminal domain C4J93_RS24880 PF01197 Ribosomal protein L31 C4J93_RS24885 PF17764 3′ DNA-binding domain (3′BD) C4J93_RS24885 PF18074 Primosomal protein N C-terminal domain C4J93_RS24885 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C4J93_RS24885 PF00271 Helicase conserved C-terminal domain C4J93_RS24885 PF00270 DEAD/DEAH box helicase C4J93_RS24890 PF03485 Arginyl tRNA synthetase N terminal domain C4J93_RS24890 PF00750 tRNA synthetases class I (R) C4J93_RS24890 PF05746 DALR anticodon binding domain C4J93_RS24900 PF00227 Proteasome subunit C4J93_RS24905 PF07724 AAA domain (Cdc48 subfamily) C4J93_RS24905 PF00004 ATPase family associated with various cellular activities (AAA) C4J93_RS24915 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C4J93_RS24920 PF00561 alpha/beta hydrolase fold C4J93_RS24950 PF01209 ubiE/COQ5 methyltransferase family C4J93_RS24960 PF03109 ABC1 family C4J93_RS24965 PF01502 Phosphoribosyl-AMP cyclohydrolase C4J93_RS24970 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C4J93_RS24975 PF02416 mttA/Hcf106 family C4J93_RS24980 PF02416 mttA/Hcf106 family C4J93_RS24985 PF00902 Sec-independent protein translocase protein (TatC) C4J93_RS25000 PF00999 Sodium/hydrogen exchanger family C4J93_RS25005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS25005 PF03466 LysR substrate binding domain C4J93_RS25020 PF01226 Formate/nitrite transporter C4J93_RS25030 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C4J93_RS25030 PF05221 S-adenosyl-L-homocysteine hydrolase C4J93_RS25035 PF02219 Methylenetetrahydrofolate reductase C4J93_RS25050 PF00270 DEAD/DEAH box helicase C4J93_RS25050 PF00271 Helicase conserved C-terminal domain C4J93_RS25055 PF04264 YceI-like domain C4J93_RS25060 PF01292 Prokaryotic cytochrome b561 C4J93_RS25065 PF00202 Aminotransferase class-III C4J93_RS25070 PF04452 RNA methyltransferase C4J93_RS25075 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS25085 PF01266 FAD dependent oxidoreductase C4J93_RS25090 PF03466 LysR substrate binding domain C4J93_RS25090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS25095 PF03006 Haemolysin-III related C4J93_RS25100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS25100 PF03466 LysR substrate binding domain C4J93_RS25115 PF00698 Acyl transferase domain C4J93_RS25120 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG C4J93_RS25130 PF01039 Carboxyl transferase domain C4J93_RS25135 PF06857 Malonate decarboxylase delta subunit (MdcD) C4J93_RS25140 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C4J93_RS25145 PF16957 Malonate decarboxylase, alpha subunit, transporter C4J93_RS25170 PF01381 Helix-turn-helix C4J93_RS25180 PF02895 Signal transducing histidine kinase, homodimeric domain C4J93_RS25180 PF01627 Hpt domain C4J93_RS25180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS25180 PF00072 Response regulator receiver domain C4J93_RS25180 PF01584 CheW-like domain C4J93_RS25185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS25185 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C4J93_RS25190 PF01584 CheW-like domain C4J93_RS25195 PF00072 Response regulator receiver domain C4J93_RS25200 PF00072 Response regulator receiver domain C4J93_RS25205 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C4J93_RS25205 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C4J93_RS25215 PF02622 Uncharacterized ACR, COG1678 C4J93_RS25220 PF03652 Holliday junction resolvase C4J93_RS25225 PF00156 Phosphoribosyl transferase domain C4J93_RS25230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4J93_RS25230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4J93_RS25235 PF01979 Amidohydrolase family C4J93_RS25245 PF00877 NlpC/P60 family C4J93_RS25250 PF00437 Type II/IV secretion system protein C4J93_RS25255 PF01168 Alanine racemase, N-terminal domain C4J93_RS25260 PF14748 Pyrroline-5-carboxylate reductase dimerisation C4J93_RS25260 PF03807 NADP oxidoreductase coenzyme F420-dependent C4J93_RS25265 PF02325 YGGT family C4J93_RS25270 PF00561 alpha/beta hydrolase fold C4J93_RS25275 PF00561 alpha/beta hydrolase fold C4J93_RS25275 PF07021 Methionine biosynthesis protein MetW C4J93_RS25285 PF01725 Ham1 family C4J93_RS25290 PF06969 HemN C-terminal domain C4J93_RS25290 PF04055 Radical SAM superfamily C4J93_RS25300 PF02390 Putative methyltransferase C4J93_RS25305 PF05690 Thiazole biosynthesis protein ThiG C4J93_RS25310 PF05690 Thiazole biosynthesis protein ThiG C4J93_RS25310 PF02597 ThiS family C4J93_RS25315 PF04241 Protein of unknown function (DUF423) C4J93_RS25320 PF00912 Transglycosylase C4J93_RS25325 PF00140 Sigma-70 factor, region 1.2 C4J93_RS25325 PF04545 Sigma-70, region 4 C4J93_RS25325 PF04542 Sigma-70 region 2 C4J93_RS25330 PF18075 FtsX extracellular domain C4J93_RS25335 PF00005 ABC transporter C4J93_RS25340 PF00448 SRP54-type protein, GTPase domain C4J93_RS25340 PF02881 SRP54-type protein, helical bundle domain C4J93_RS25345 PF00675 Insulinase (Peptidase family M16) C4J93_RS25345 PF05193 Peptidase M16 inactive domain C4J93_RS25350 PF05193 Peptidase M16 inactive domain C4J93_RS25360 PF00561 alpha/beta hydrolase fold C4J93_RS25375 PF00581 Rhodanese-like domain C4J93_RS25380 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS25385 PF00171 Aldehyde dehydrogenase family C4J93_RS25395 PF05199 GMC oxidoreductase C4J93_RS25395 PF00732 GMC oxidoreductase C4J93_RS25400 PF01467 Cytidylyltransferase-like C4J93_RS25405 PF00037 4Fe-4S binding domain C4J93_RS25410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C4J93_RS25410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C4J93_RS25410 PF06827 Zinc finger found in FPG and IleRS C4J93_RS25420 PF17785 PUA-like domain C4J93_RS25420 PF10672 S-adenosylmethionine-dependent methyltransferase C4J93_RS25425 PF00920 Dehydratase family C4J93_RS25435 PF00375 Sodium:dicarboxylate symporter family C4J93_RS25440 PF00186 Dihydrofolate reductase C4J93_RS25450 PF01926 50S ribosome-binding GTPase C4J93_RS25450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C4J93_RS25455 PF01266 FAD dependent oxidoreductase C4J93_RS25465 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS25470 PF00005 ABC transporter C4J93_RS25470 PF08402 TOBE domain C4J93_RS25475 PF03466 LysR substrate binding domain C4J93_RS25475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS25480 PF00403 Heavy-metal-associated domain C4J93_RS25485 PF13411 MerR HTH family regulatory protein C4J93_RS25490 PF00303 Thymidylate synthase C4J93_RS25495 PF01790 Prolipoprotein diacylglyceryl transferase C4J93_RS25505 PF05524 PEP-utilising enzyme, N-terminal C4J93_RS25505 PF01590 GAF domain C4J93_RS25505 PF02896 PEP-utilising enzyme, TIM barrel domain C4J93_RS25505 PF00391 PEP-utilising enzyme, mobile domain C4J93_RS25510 PF00293 NUDIX domain C4J93_RS25530 PF00585 C-terminal regulatory domain of Threonine dehydratase C4J93_RS25530 PF00291 Pyridoxal-phosphate dependent enzyme C4J93_RS25535 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C4J93_RS25540 PF04389 Peptidase family M28 C4J93_RS25545 PF06977 SdiA-regulated C4J93_RS25550 PF06977 SdiA-regulated C4J93_RS25555 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4J93_RS25560 PF02913 FAD linked oxidases, C-terminal domain C4J93_RS25560 PF01565 FAD binding domain C4J93_RS25570 PF01842 ACT domain C4J93_RS25570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J93_RS25570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J93_RS25580 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS25605 PF01804 Penicillin amidase C4J93_RS25610 PF12833 Helix-turn-helix domain C4J93_RS25610 PF01965 DJ-1/PfpI family C4J93_RS25620 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS25625 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS25630 PF08402 TOBE domain C4J93_RS25630 PF00005 ABC transporter C4J93_RS25635 PF13416 Bacterial extracellular solute-binding protein C4J93_RS25640 PF13416 Bacterial extracellular solute-binding protein C4J93_RS25645 PF00202 Aminotransferase class-III C4J93_RS25650 PF00120 Glutamine synthetase, catalytic domain C4J93_RS25655 PF00120 Glutamine synthetase, catalytic domain C4J93_RS25670 PF03459 TOBE domain C4J93_RS25670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS25675 PF00005 ABC transporter C4J93_RS25680 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS25685 PF00296 Luciferase-like monooxygenase C4J93_RS25690 PF09084 NMT1/THI5 like C4J93_RS25695 PF03358 NADPH-dependent FMN reductase C4J93_RS25700 PF00578 AhpC/TSA family C4J93_RS25700 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4J93_RS25705 PF03573 outer membrane porin, OprD family C4J93_RS25710 PF00583 Acetyltransferase (GNAT) family C4J93_RS25710 PF00696 Amino acid kinase family C4J93_RS25715 PF07687 Peptidase dimerisation domain C4J93_RS25715 PF01546 Peptidase family M20/M25/M40 C4J93_RS25725 PF13404 AsnC-type helix-turn-helix domain C4J93_RS25725 PF01037 Lrp/AsnC ligand binding domain C4J93_RS25735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C4J93_RS25735 PF00437 Type II/IV secretion system protein C4J93_RS25740 PF16200 C-terminal region of band_7 C4J93_RS25740 PF01145 SPFH domain / Band 7 family C4J93_RS25755 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C4J93_RS25760 PF01597 Glycine cleavage H-protein C4J93_RS25765 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4J93_RS25765 PF01571 Aminomethyltransferase folate-binding domain C4J93_RS25770 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS25780 PF01494 FAD binding domain C4J93_RS25790 PF01494 FAD binding domain C4J93_RS25795 PF05195 Aminopeptidase P, N-terminal domain C4J93_RS25795 PF00557 Metallopeptidase family M24 C4J93_RS25800 PF03695 Uncharacterised protein family (UPF0149) C4J93_RS25810 PF05164 Cell division protein ZapA C4J93_RS25820 PF01812 5-formyltetrahydrofolate cyclo-ligase family C4J93_RS25840 PF14765 Polyketide synthase dehydratase C4J93_RS25840 PF00550 Phosphopantetheine attachment site C4J93_RS25840 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J93_RS25840 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J93_RS25840 PF16197 Ketoacyl-synthetase C-terminal extension C4J93_RS25840 PF08990 Erythronolide synthase docking C4J93_RS25840 PF08240 Alcohol dehydrogenase GroES-like domain C4J93_RS25840 PF00698 Acyl transferase domain C4J93_RS25840 PF08659 KR domain C4J93_RS25845 PF07690 Major Facilitator Superfamily C4J93_RS25860 PF00175 Oxidoreductase NAD-binding domain C4J93_RS25865 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C4J93_RS25870 PF01757 Acyltransferase family C4J93_RS25875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J93_RS25875 PF07497 Rho termination factor, RNA-binding domain C4J93_RS25875 PF07498 Rho termination factor, N-terminal domain C4J93_RS25880 PF00085 Thioredoxin C4J93_RS25885 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS25885 PF07729 FCD domain C4J93_RS25890 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS25895 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS25900 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS25905 PF00005 ABC transporter C4J93_RS25915 PF13954 PapC N-terminal domain C4J93_RS25915 PF00577 Outer membrane usher protein C4J93_RS25915 PF13953 PapC C-terminal domain C4J93_RS25920 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J93_RS25930 PF02541 Ppx/GppA phosphatase family C4J93_RS25935 PF13090 Polyphosphate kinase C-terminal domain 2 C4J93_RS25935 PF02503 Polyphosphate kinase middle domain C4J93_RS25935 PF17941 Polyphosphate kinase C-terminal domain 1 C4J93_RS25935 PF13089 Polyphosphate kinase N-terminal domain C4J93_RS25945 PF09335 SNARE associated Golgi protein C4J93_RS25950 PF04116 Fatty acid hydroxylase superfamily C4J93_RS25960 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C4J93_RS25965 PF03239 Iron permease FTR1 family C4J93_RS25970 PF01810 LysE type translocator C4J93_RS25980 PF12848 ABC transporter C4J93_RS25980 PF00005 ABC transporter C4J93_RS25995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J93_RS25995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J93_RS26000 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C4J93_RS26005 PF02600 Disulfide bond formation protein DsbB C4J93_RS26020 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C4J93_RS26020 PF03900 Porphobilinogen deaminase, C-terminal domain C4J93_RS26025 PF00072 Response regulator receiver domain C4J93_RS26025 PF04397 LytTr DNA-binding domain C4J93_RS26030 PF00206 Lyase C4J93_RS26030 PF14698 Argininosuccinate lyase C-terminal C4J93_RS26035 PF14497 Glutathione S-transferase, C-terminal domain C4J93_RS26035 PF13417 Glutathione S-transferase, N-terminal domain C4J93_RS26050 PF01295 Adenylate cyclase, class-I C4J93_RS26050 PF12633 Adenylate cyclase NT domain C4J93_RS26055 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J93_RS26055 PF14760 Rnk N-terminus C4J93_RS26065 PF01491 Frataxin-like domain C4J93_RS26070 PF13627 Prokaryotic lipoprotein-attachment site C4J93_RS26075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4J93_RS26075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4J93_RS26080 PF01678 Diaminopimelate epimerase C4J93_RS26090 PF02899 Phage integrase, N-terminal SAM-like domain C4J93_RS26090 PF00589 Phage integrase family C4J93_RS26095 PF13419 Haloacid dehalogenase-like hydrolase C4J93_RS26105 PF01894 Uncharacterised protein family UPF0047 C4J93_RS26110 PF00909 Ammonium Transporter Family C4J93_RS26115 PF00543 Nitrogen regulatory protein P-II C4J93_RS26120 PF04380 Membrane fusogenic activity C4J93_RS26125 PF01078 Magnesium chelatase, subunit ChlI C4J93_RS26125 PF13335 Magnesium chelatase, subunit ChlI C-terminal C4J93_RS26130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J93_RS26130 PF00672 HAMP domain C4J93_RS26135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS26135 PF03466 LysR substrate binding domain C4J93_RS26140 PF01554 MatE C4J93_RS26145 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS26145 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS26145 PF00563 EAL domain C4J93_RS26150 PF13361 UvrD-like helicase C-terminal domain C4J93_RS26150 PF00580 UvrD/REP helicase N-terminal domain C4J93_RS26170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J93_RS26180 PF01168 Alanine racemase, N-terminal domain C4J93_RS26180 PF00842 Alanine racemase, C-terminal domain C4J93_RS26185 PF01042 Endoribonuclease L-PSP C4J93_RS26190 PF01266 FAD dependent oxidoreductase C4J93_RS26195 PF01037 Lrp/AsnC ligand binding domain C4J93_RS26205 PF01266 FAD dependent oxidoreductase C4J93_RS26215 PF00155 Aminotransferase class I and II C4J93_RS26215 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS26220 PF13091 PLD-like domain C4J93_RS26230 PF00171 Aldehyde dehydrogenase family C4J93_RS26240 PF00471 Ribosomal protein L33 C4J93_RS26245 PF00830 Ribosomal L28 family C4J93_RS26250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J93_RS26255 PF04002 RadC-like JAB domain C4J93_RS26260 PF02441 Flavoprotein C4J93_RS26260 PF04127 DNA / pantothenate metabolism flavoprotein C4J93_RS26265 PF00692 dUTPase C4J93_RS26280 PF00696 Amino acid kinase family C4J93_RS26285 PF00156 Phosphoribosyl transferase domain C4J93_RS26290 PF03372 Endonuclease/Exonuclease/phosphatase family C4J93_RS26300 PF01138 3' exoribonuclease family, domain 1 C4J93_RS26300 PF03725 3' exoribonuclease family, domain 2 C4J93_RS26305 PF08340 Domain of unknown function (DUF1732) C4J93_RS26305 PF03755 YicC-like family, N-terminal region C4J93_RS26310 PF00625 Guanylate kinase C4J93_RS26315 PF01192 RNA polymerase Rpb6 C4J93_RS26320 PF04607 Region found in RelA / SpoT proteins C4J93_RS26320 PF13291 ACT domain C4J93_RS26320 PF02824 TGS domain C4J93_RS26325 PF01042 Endoribonuclease L-PSP C4J93_RS26340 PF01618 MotA/TolQ/ExbB proton channel family C4J93_RS26345 PF02472 Biopolymer transport protein ExbD/TolR C4J93_RS26350 PF03544 Gram-negative bacterial TonB protein C-terminal C4J93_RS26355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS26355 PF03466 LysR substrate binding domain C4J93_RS26360 PF17191 RecG wedge domain C4J93_RS26360 PF00271 Helicase conserved C-terminal domain C4J93_RS26360 PF00270 DEAD/DEAH box helicase C4J93_RS26390 PF03781 Sulfatase-modifying factor enzyme 1 C4J93_RS26400 PF00005 ABC transporter C4J93_RS26405 PF03793 PASTA domain C4J93_RS26405 PF00069 Protein kinase domain C4J93_RS26420 PF14331 ImcF-related N-terminal domain C4J93_RS26420 PF06744 Type VI secretion protein IcmF C-terminal C4J93_RS26420 PF06761 Intracellular multiplication and human macrophage-killing C4J93_RS26425 PF13677 Membrane MotB of proton-channel complex MotA/MotB C4J93_RS26425 PF00691 OmpA family C4J93_RS26430 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE C4J93_RS26445 PF06812 ImpA, N-terminal, type VI secretion system C4J93_RS26450 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 C4J93_RS26455 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath C4J93_RS26460 PF05638 Type VI secretion system effector, Hcp C4J93_RS26465 PF04965 Gene 25-like lysozyme C4J93_RS26470 PF05947 Type VI secretion system, TssF C4J93_RS26485 PF04717 Type VI secretion system, phage-baseplate injector C4J93_RS26505 PF00216 Bacterial DNA-binding protein C4J93_RS26510 PF18113 Rubredoxin binding C-terminal domain C4J93_RS26510 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J93_RS26515 PF00301 Rubredoxin C4J93_RS26520 PF04345 Chorismate lyase C4J93_RS26525 PF01040 UbiA prenyltransferase family C4J93_RS26535 PF00072 Response regulator receiver domain C4J93_RS26535 PF00486 Transcriptional regulatory protein, C terminal C4J93_RS26540 PF11808 Phosphate regulon sensor protein PhoR C4J93_RS26540 PF00989 PAS fold C4J93_RS26540 PF00512 His Kinase A (phospho-acceptor) domain C4J93_RS26540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J93_RS26545 PF01595 Cyclin M transmembrane N-terminal domain C4J93_RS26545 PF03471 Transporter associated domain C4J93_RS26545 PF00571 CBS domain C4J93_RS26550 PF00072 Response regulator receiver domain C4J93_RS26555 PF01895 PhoU domain C4J93_RS26560 PF00005 ABC transporter C4J93_RS26570 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS26575 PF12849 PBP superfamily domain C4J93_RS26590 PF07690 Major Facilitator Superfamily C4J93_RS26595 PF03061 Thioesterase superfamily C4J93_RS26615 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C4J93_RS26615 PF02222 ATP-grasp domain C4J93_RS26620 PF00731 AIR carboxylase C4J93_RS26625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS26625 PF03466 LysR substrate binding domain C4J93_RS26630 PF10415 Fumarase C C-terminus C4J93_RS26630 PF00206 Lyase C4J93_RS26635 PF01235 Sodium:alanine symporter family C4J93_RS26640 PF00710 Asparaginase, N-terminal C4J93_RS26640 PF17763 Glutaminase/Asparaginase C-terminal domain C4J93_RS26650 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J93_RS26650 PF12833 Helix-turn-helix domain C4J93_RS26655 PF00850 Histone deacetylase domain C4J93_RS26660 PF13416 Bacterial extracellular solute-binding protein C4J93_RS26670 PF00392 Bacterial regulatory proteins, gntR family C4J93_RS26670 PF00155 Aminotransferase class I and II C4J93_RS26675 PF04299 Putative FMN-binding domain C4J93_RS26695 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J93_RS26700 PF00528 Binding-protein-dependent transport system inner membrane component C4J93_RS26720 PF00364 Biotin-requiring enzyme C4J93_RS26720 PF00682 HMGL-like C4J93_RS26720 PF02436 Conserved carboxylase domain C4J93_RS26725 PF00289 Biotin carboxylase, N-terminal domain C4J93_RS26725 PF02785 Biotin carboxylase C-terminal domain C4J93_RS26725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J93_RS26730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J93_RS26730 PF03466 LysR substrate binding domain C4J93_RS26740 PF01380 SIS domain C4J93_RS26740 PF01418 Helix-turn-helix domain, rpiR family C4J93_RS26745 PF03707 Bacterial signalling protein N terminal repeat C4J93_RS26745 PF13188 PAS domain C4J93_RS26745 PF00563 EAL domain C4J93_RS26745 PF00990 Diguanylate cyclase, GGDEF domain C4J93_RS26750 PF13361 UvrD-like helicase C-terminal domain C4J93_RS26750 PF00580 UvrD/REP helicase N-terminal domain C4J93_RS26765 PF00999 Sodium/hydrogen exchanger family C4J93_RS26765 PF02254 TrkA-N domain C4J93_RS26770 PF03061 Thioesterase superfamily C4J93_RS26775 PF08543 Phosphomethylpyrimidine kinase C4J93_RS26785 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J93_RS26785 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J93_RS26795 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J93_RS26795 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J93_RS26805 PF11741 AMIN domain C4J93_RS26805 PF01520 N-acetylmuramoyl-L-alanine amidase C4J93_RS26810 PF02649 Type I GTP cyclohydrolase folE2 C4J93_RS26815 PF00005 ABC transporter C4J93_RS26820 PF00950 ABC 3 transport family C4J93_RS26825 PF01297 Zinc-uptake complex component A periplasmic C4J93_RS26830 PF12276 Protein of unknown function (DUF3617) C4J93_RS26850 PF05114 Protein of unknown function (DUF692) C4J93_RS26860 PF00403 Heavy-metal-associated domain C4J93_RS26880 PF01066 CDP-alcohol phosphatidyltransferase C4J93_RS26885 PF12146 Serine aminopeptidase, S33 C4J93_RS26885 PF12147 Putative methyltransferase C4J93_RS26890 PF00782 Dual specificity phosphatase, catalytic domain C4J93_RS26915 PF00440 Bacterial regulatory proteins, tetR family C4J93_RS26920 PF01425 Amidase C4J93_RS26930 PF01380 SIS domain C4J93_RS26935 PF00455 DeoR C terminal sensor domain C4J93_RS26935 PF08220 DeoR-like helix-turn-helix domain C4J93_RS26940 PF12804 MobA-like NTP transferase domain C4J93_RS26940 PF00132 Bacterial transferase hexapeptide (six repeats) C4J93_RS26950 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C4J93_RS26950 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C4J93_RS26955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J93_RS26955 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J93_RS26960 PF00231 ATP synthase C4J93_RS26965 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J93_RS26965 PF00306 ATP synthase alpha/beta chain, C terminal domain C4J93_RS26965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J93_RS26970 PF00213 ATP synthase delta (OSCP) subunit C4J93_RS26975 PF00430 ATP synthase B/B' CF(0) C4J93_RS26980 PF00137 ATP synthase subunit C C4J93_RS26985 PF00119 ATP synthase A chain C4J93_RS26990 PF03899 ATP synthase I chain C4J93_RS26995 PF02195 ParB-like nuclease domain C4J93_RS26995 PF17762 HTH domain found in ParB protein C4J93_RS27000 PF13614 AAA domain C4J93_RS27005 PF02527 rRNA small subunit methyltransferase G C4J93_RS27010 PF01134 Glucose inhibited division protein A C4J93_RS27010 PF13932 GidA associated domain C4J93_RS27015 PF04542 Sigma-70 region 2 C4J93_RS27015 PF08281 Sigma-70, region 4 C4J93_RS27025 PF00593 TonB dependent receptor C4J93_RS27025 PF07715 TonB-dependent Receptor Plug Domain C4J93_RS27035 PF02096 60Kd inner membrane protein C4J93_RS27035 PF14849 YidC periplasmic domain C4J93_RS27040 PF01809 Putative membrane protein insertion efficiency factor C4J93_RS27045 PF00825 Ribonuclease P C4J93_RS27050 PF00468 Ribosomal protein L34