locus-tag class description C4J89_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C4J89_RS00010 PF02767 DNA polymerase III beta subunit, central domain C4J89_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C4J89_RS00015 PF02463 RecF/RecN/SMC N terminal domain C4J89_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS00020 PF18053 DNA gyrase B subunit insert domain C4J89_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus C4J89_RS00020 PF00204 DNA gyrase B C4J89_RS00020 PF01751 Toprim domain C4J89_RS00025 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS00025 PF00072 Response regulator receiver domain C4J89_RS00030 PF00989 PAS fold C4J89_RS00030 PF18698 Histidine kinase sensor domain C4J89_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS00030 PF00672 HAMP domain C4J89_RS00030 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS00045 PF05746 DALR anticodon binding domain C4J89_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit C4J89_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit C4J89_RS00055 PF03352 Methyladenine glycosylase C4J89_RS00070 PF02254 TrkA-N domain C4J89_RS00070 PF02080 TrkA-C domain C4J89_RS00075 PF01189 16S rRNA methyltransferase RsmB/F C4J89_RS00075 PF01029 NusB family C4J89_RS00080 PF02911 Formyl transferase, C-terminal domain C4J89_RS00080 PF00551 Formyl transferase C4J89_RS00085 PF01327 Polypeptide deformylase C4J89_RS00095 PF17782 DprA winged helix domain C4J89_RS00095 PF02481 DNA recombination-mediator protein A C4J89_RS00100 PF01300 Telomere recombination C4J89_RS00105 PF00107 Zinc-binding dehydrogenase C4J89_RS00105 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS00110 PF01218 Coproporphyrinogen III oxidase C4J89_RS00115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C4J89_RS00115 PF01488 Shikimate / quinate 5-dehydrogenase C4J89_RS00115 PF08501 Shikimate dehydrogenase substrate binding domain C4J89_RS00120 PF00916 Sulfate permease family C4J89_RS00120 PF01740 STAS domain C4J89_RS00130 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J89_RS00135 PF00884 Sulfatase C4J89_RS00135 PF12411 Choline sulfatase enzyme C terminal C4J89_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS00140 PF03466 LysR substrate binding domain C4J89_RS00150 PF05035 2-keto-3-deoxy-galactonokinase C4J89_RS00155 PF01081 KDPG and KHG aldolase C4J89_RS00160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J89_RS00160 PF13378 Enolase C-terminal domain-like C4J89_RS00165 PF07690 Major Facilitator Superfamily C4J89_RS00170 PF00290 Tryptophan synthase alpha chain C4J89_RS00175 PF00291 Pyridoxal-phosphate dependent enzyme C4J89_RS00180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS00180 PF03466 LysR substrate binding domain C4J89_RS00190 PF07311 Dodecin C4J89_RS00200 PF00296 Luciferase-like monooxygenase C4J89_RS00205 PF02566 OsmC-like protein C4J89_RS00225 PF14431 YwqJ-like deaminase C4J89_RS00225 PF18807 Tripartite Tc toxins repeat C4J89_RS00230 PF13419 Haloacid dehalogenase-like hydrolase C4J89_RS00235 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS00240 PF01432 Peptidase family M3 C4J89_RS00250 PF13618 Gluconate 2-dehydrogenase subunit 3 C4J89_RS00255 PF00732 GMC oxidoreductase C4J89_RS00255 PF05199 GMC oxidoreductase C4J89_RS00260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J89_RS00260 PF00034 Cytochrome c C4J89_RS00265 PF04055 Radical SAM superfamily C4J89_RS00270 PF00484 Carbonic anhydrase C4J89_RS00275 PF00916 Sulfate permease family C4J89_RS00275 PF01740 STAS domain C4J89_RS00285 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4J89_RS00285 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C4J89_RS00290 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J89_RS00295 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C4J89_RS00300 PF00510 Cytochrome c oxidase subunit III C4J89_RS00320 PF02628 Cytochrome oxidase assembly protein C4J89_RS00325 PF01040 UbiA prenyltransferase family C4J89_RS00330 PF02630 SCO1/SenC C4J89_RS00335 PF03180 NLPA lipoprotein C4J89_RS00340 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS00345 PF00005 ABC transporter C4J89_RS00345 PF09383 NIL domain C4J89_RS00350 PF06628 Catalase-related immune-responsive C4J89_RS00350 PF18011 C-terminal domain found in long catalases C4J89_RS00350 PF00199 Catalase C4J89_RS00360 PF00950 ABC 3 transport family C4J89_RS00365 PF00005 ABC transporter C4J89_RS00370 PF01475 Ferric uptake regulator family C4J89_RS00375 PF01297 Zinc-uptake complex component A periplasmic C4J89_RS00380 PF01636 Phosphotransferase enzyme family C4J89_RS00390 PF01367 5'-3' exonuclease, C-terminal SAM fold C4J89_RS00390 PF00476 DNA polymerase family A C4J89_RS00390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C4J89_RS00390 PF01612 3'-5' exonuclease C4J89_RS00395 PF01926 50S ribosome-binding GTPase C4J89_RS00405 PF00034 Cytochrome c C4J89_RS00410 PF01323 DSBA-like thioredoxin domain C4J89_RS00420 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS00425 PF01510 N-acetylmuramoyl-L-alanine amidase C4J89_RS00430 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB C4J89_RS00430 PF08448 PAS fold C4J89_RS00430 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS00430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS00430 PF00672 HAMP domain C4J89_RS00435 PF00158 Sigma-54 interaction domain C4J89_RS00435 PF00072 Response regulator receiver domain C4J89_RS00435 PF02954 Bacterial regulatory protein, Fis family C4J89_RS00445 PF07043 Protein of unknown function (DUF1328) C4J89_RS00455 PF00375 Sodium:dicarboxylate symporter family C4J89_RS00460 PF07670 Nucleoside recognition C4J89_RS00475 PF00005 ABC transporter C4J89_RS00480 PF02405 Permease MlaE C4J89_RS00490 PF00675 Insulinase (Peptidase family M16) C4J89_RS00490 PF05193 Peptidase M16 inactive domain C4J89_RS00495 PF02690 Na+/Pi-cotransporter C4J89_RS00500 PF03741 Integral membrane protein TerC family C4J89_RS00505 PF03600 Citrate transporter C4J89_RS00535 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C4J89_RS00535 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C4J89_RS00540 PF02233 NAD(P) transhydrogenase beta subunit C4J89_RS00545 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C4J89_RS00550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C4J89_RS00550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C4J89_RS00555 PF03466 LysR substrate binding domain C4J89_RS00555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS00560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS00560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS00560 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS00565 PF02515 CoA-transferase family III C4J89_RS00605 PF00672 HAMP domain C4J89_RS00605 PF02743 Cache domain C4J89_RS00605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS00610 PF00501 AMP-binding enzyme C4J89_RS00610 PF00550 Phosphopantetheine attachment site C4J89_RS00610 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS00610 PF00668 Condensation domain C4J89_RS00610 PF00975 Thioesterase domain C4J89_RS00635 PF13188 PAS domain C4J89_RS00635 PF00563 EAL domain C4J89_RS00635 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS00635 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS00655 PF00005 ABC transporter C4J89_RS00655 PF03412 Peptidase C39 family C4J89_RS00655 PF00664 ABC transporter transmembrane region C4J89_RS00660 PF00529 HlyD membrane-fusion protein of T1SS C4J89_RS00660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J89_RS00665 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C4J89_RS00670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS00670 PF03466 LysR substrate binding domain C4J89_RS00675 PF07690 Major Facilitator Superfamily C4J89_RS00680 PF13533 Biotin-lipoyl like C4J89_RS00685 PF02321 Outer membrane efflux protein C4J89_RS00775 PF04632 Fusaric acid resistance protein family C4J89_RS00785 PF13533 Biotin-lipoyl like C4J89_RS00790 PF02321 Outer membrane efflux protein C4J89_RS00800 PF06097 Bacterial protein of unknown function (DUF945) C4J89_RS00810 PF14883 Hypothetical glycosyl hydrolase family 13 C4J89_RS00810 PF01522 Polysaccharide deacetylase C4J89_RS00815 PF00535 Glycosyl transferase family 2 C4J89_RS00825 PF17287 POTRA domain C4J89_RS00825 PF08479 POTRA domain, ShlB-type C4J89_RS00825 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB C4J89_RS00885 PF03783 Curli production assembly/transport component CsgG C4J89_RS00895 PF05643 Putative bacterial lipoprotein (DUF799) C4J89_RS00900 PF12450 von Willebrand factor C4J89_RS00900 PF00092 von Willebrand factor type A domain C4J89_RS00900 PF12034 Domain of unknown function (DUF3520) C4J89_RS00905 PF08281 Sigma-70, region 4 C4J89_RS00905 PF04542 Sigma-70 region 2 C4J89_RS00970 PF00171 Aldehyde dehydrogenase family C4J89_RS00975 PF00202 Aminotransferase class-III C4J89_RS00985 PF00795 Carbon-nitrogen hydrolase C4J89_RS00990 PF08448 PAS fold C4J89_RS00990 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS01000 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS01000 PF00563 EAL domain C4J89_RS01000 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS01015 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01020 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01025 PF12857 TOBE-like domain C4J89_RS01025 PF00005 ABC transporter C4J89_RS01035 PF00576 HIUase/Transthyretin family C4J89_RS01045 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS01045 PF00072 Response regulator receiver domain C4J89_RS01050 PF12833 Helix-turn-helix domain C4J89_RS01050 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J89_RS01060 PF00005 ABC transporter C4J89_RS01065 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01070 PF09084 NMT1/THI5 like C4J89_RS01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS01075 PF03466 LysR substrate binding domain C4J89_RS01080 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C4J89_RS01090 PF00884 Sulfatase C4J89_RS01090 PF16347 Domain of unknown function (DUF4976) C4J89_RS01095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS01095 PF03466 LysR substrate binding domain C4J89_RS01100 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS01100 PF00593 TonB dependent receptor C4J89_RS01105 PF07690 Major Facilitator Superfamily C4J89_RS01110 PF03544 Gram-negative bacterial TonB protein C-terminal C4J89_RS01115 PF01618 MotA/TolQ/ExbB proton channel family C4J89_RS01120 PF02472 Biopolymer transport protein ExbD/TolR C4J89_RS01130 PF00158 Sigma-54 interaction domain C4J89_RS01135 PF03180 NLPA lipoprotein C4J89_RS01140 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01145 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01150 PF00005 ABC transporter C4J89_RS01155 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS01160 PF13476 AAA domain C4J89_RS01175 PF00873 AcrB/AcrD/AcrF family C4J89_RS01190 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01195 PF00005 ABC transporter C4J89_RS01195 PF09383 NIL domain C4J89_RS01200 PF03180 NLPA lipoprotein C4J89_RS01205 PF00296 Luciferase-like monooxygenase C4J89_RS01210 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS01210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS01215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS01215 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS01225 PF00005 ABC transporter C4J89_RS01230 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01235 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS01240 PF00291 Pyridoxal-phosphate dependent enzyme C4J89_RS01245 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS01250 PF02028 BCCT, betaine/carnitine/choline family transporter C4J89_RS01255 PF00248 Aldo/keto reductase family C4J89_RS01260 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C4J89_RS01265 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01270 PF00005 ABC transporter C4J89_RS01275 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J89_RS01280 PF04262 Glutamate-cysteine ligase C4J89_RS01290 PF17674 HHH domain C4J89_RS01290 PF00575 S1 RNA binding domain C4J89_RS01290 PF09371 Tex-like protein N-terminal domain C4J89_RS01290 PF16921 Tex protein YqgF-like domain C4J89_RS01295 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS01295 PF00072 Response regulator receiver domain C4J89_RS01300 PF00672 HAMP domain C4J89_RS01300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS01300 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS01305 PF18030 RimK PreATP-grasp domain C4J89_RS01305 PF08443 RimK-like ATP-grasp domain C4J89_RS01310 PF08443 RimK-like ATP-grasp domain C4J89_RS01310 PF18030 RimK PreATP-grasp domain C4J89_RS01315 PF12792 CSS motif domain associated with EAL C4J89_RS01315 PF00563 EAL domain C4J89_RS01320 PF01479 S4 domain C4J89_RS01330 PF01430 Hsp33 protein C4J89_RS01335 PF01293 Phosphoenolpyruvate carboxykinase C4J89_RS01385 PF00271 Helicase conserved C-terminal domain C4J89_RS01385 PF00270 DEAD/DEAH box helicase C4J89_RS01385 PF09382 RQC domain C4J89_RS01385 PF00570 HRDC domain C4J89_RS01385 PF16124 RecQ zinc-binding C4J89_RS01390 PF03061 Thioesterase superfamily C4J89_RS01400 PF00384 Molybdopterin oxidoreductase C4J89_RS01405 PF02634 FdhD/NarQ family C4J89_RS01410 PF01476 LysM domain C4J89_RS01410 PF04972 BON domain C4J89_RS01415 PF13419 Haloacid dehalogenase-like hydrolase C4J89_RS01420 PF00293 NUDIX domain C4J89_RS01425 PF00459 Inositol monophosphatase family C4J89_RS01435 PF00072 Response regulator receiver domain C4J89_RS01435 PF02954 Bacterial regulatory protein, Fis family C4J89_RS01435 PF00158 Sigma-54 interaction domain C4J89_RS01440 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS01440 PF02743 Cache domain C4J89_RS01445 PF04321 RmlD substrate binding domain C4J89_RS01450 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C4J89_RS01455 PF00483 Nucleotidyl transferase C4J89_RS01460 PF16363 GDP-mannose 4,6 dehydratase C4J89_RS01465 PF00202 Aminotransferase class-III C4J89_RS01470 PF04371 Porphyromonas-type peptidyl-arginine deiminase C4J89_RS01480 PF03573 outer membrane porin, OprD family C4J89_RS01500 PF00550 Phosphopantetheine attachment site C4J89_RS01500 PF14765 Polyketide synthase dehydratase C4J89_RS01500 PF08990 Erythronolide synthase docking C4J89_RS01500 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS01500 PF00698 Acyl transferase domain C4J89_RS01500 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J89_RS01500 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J89_RS01500 PF08659 KR domain C4J89_RS01500 PF16197 Ketoacyl-synthetase C-terminal extension C4J89_RS01510 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS01525 PF01320 Colicin immunity protein / pyocin immunity protein C4J89_RS01530 PF06958 S-type Pyocin C4J89_RS01560 PF18698 Histidine kinase sensor domain C4J89_RS01560 PF00989 PAS fold C4J89_RS01560 PF00672 HAMP domain C4J89_RS01560 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS01600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J89_RS01610 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01615 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01620 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS01625 PF00005 ABC transporter C4J89_RS01630 PF00324 Amino acid permease C4J89_RS01650 PF08479 POTRA domain, ShlB-type C4J89_RS01650 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB C4J89_RS01650 PF17287 POTRA domain C4J89_RS01655 PF05594 Haemagluttinin repeat C4J89_RS01655 PF13332 Hemagglutinin repeat C4J89_RS01655 PF05860 haemagglutination activity domain C4J89_RS01655 PF04829 Pre-toxin domain with VENN motif C4J89_RS01655 PF15526 Novel toxin 21 C4J89_RS01695 PF04362 Bacterial Fe(2+) trafficking C4J89_RS01700 PF00730 HhH-GPD superfamily base excision DNA repair protein C4J89_RS01700 PF10576 Iron-sulfur binding domain of endonuclease III C4J89_RS01700 PF14815 NUDIX domain C4J89_RS01700 PF00633 Helix-hairpin-helix motif C4J89_RS01710 PF07690 Major Facilitator Superfamily C4J89_RS01715 PF00475 Imidazoleglycerol-phosphate dehydratase C4J89_RS01720 PF00117 Glutamine amidotransferase class-I C4J89_RS01730 PF00977 Histidine biosynthesis protein C4J89_RS01735 PF00977 Histidine biosynthesis protein C4J89_RS01745 PF04748 Divergent polysaccharide deacetylase C4J89_RS01750 PF13180 PDZ domain C4J89_RS01750 PF03572 Peptidase family S41 C4J89_RS01755 PF01551 Peptidase family M23 C4J89_RS01765 PF01676 Metalloenzyme superfamily C4J89_RS01765 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C4J89_RS01770 PF00581 Rhodanese-like domain C4J89_RS01775 PF00462 Glutaredoxin C4J89_RS01780 PF02556 Preprotein translocase subunit SecB C4J89_RS01785 PF00588 SpoU rRNA Methylase family C4J89_RS01800 PF00158 Sigma-54 interaction domain C4J89_RS01800 PF00072 Response regulator receiver domain C4J89_RS01800 PF02954 Bacterial regulatory protein, Fis family C4J89_RS01805 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS01805 PF00989 PAS fold C4J89_RS01805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS01810 PF01817 Chorismate mutase type II C4J89_RS01815 PF03951 Glutamine synthetase, beta-Grasp domain C4J89_RS01815 PF00120 Glutamine synthetase, catalytic domain C4J89_RS01825 PF02568 Thiamine biosynthesis protein (ThiI) C4J89_RS01825 PF02926 THUMP domain C4J89_RS01830 PF03144 Elongation factor Tu domain 2 C4J89_RS01830 PF00009 Elongation factor Tu GTP binding domain C4J89_RS01830 PF00679 Elongation factor G C-terminus C4J89_RS01845 PF00343 Carbohydrate phosphorylase C4J89_RS01850 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C4J89_RS01860 PF08212 Lipocalin-like domain C4J89_RS01865 PF01979 Amidohydrolase family C4J89_RS01870 PF07702 UTRA domain C4J89_RS01870 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS01875 PF05962 HutD C4J89_RS01880 PF17392 Urocanase C-terminal domain C4J89_RS01880 PF17391 Urocanase N-terminal domain C4J89_RS01880 PF01175 Urocanase Rossmann-like domain C4J89_RS01885 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J89_RS01895 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01900 PF00005 ABC transporter C4J89_RS01900 PF00571 CBS domain C4J89_RS01905 PF00221 Aromatic amino acid lyase C4J89_RS01910 PF00221 Aromatic amino acid lyase C4J89_RS01920 PF01979 Amidohydrolase family C4J89_RS01930 PF01385 Probable transposase C4J89_RS01930 PF12323 Helix-turn-helix domain C4J89_RS01930 PF07282 Putative transposase DNA-binding domain C4J89_RS01935 PF00561 alpha/beta hydrolase fold C4J89_RS01940 PF02580 D-Tyr-tRNA(Tyr) deacylase C4J89_RS01945 PF04349 Periplasmic glucan biosynthesis protein, MdoG C4J89_RS01950 PF00535 Glycosyl transferase family 2 C4J89_RS01955 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS01960 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS01965 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS01970 PF00005 ABC transporter C4J89_RS01975 PF00672 HAMP domain C4J89_RS01975 PF16591 Helical bimodular sensor domain C4J89_RS01975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS01980 PF16591 Helical bimodular sensor domain C4J89_RS01980 PF00672 HAMP domain C4J89_RS01980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS01995 PF06476 Protein of unknown function (DUF1090) C4J89_RS02000 PF03120 NAD-dependent DNA ligase OB-fold domain C4J89_RS02000 PF01653 NAD-dependent DNA ligase adenylation domain C4J89_RS02010 PF00438 S-adenosylmethionine synthetase, N-terminal domain C4J89_RS02010 PF02772 S-adenosylmethionine synthetase, central domain C4J89_RS02010 PF02773 S-adenosylmethionine synthetase, C-terminal domain C4J89_RS02015 PF01022 Bacterial regulatory protein, arsR family C4J89_RS02020 PF02780 Transketolase, C-terminal domain C4J89_RS02020 PF00456 Transketolase, thiamine diphosphate binding domain C4J89_RS02020 PF02779 Transketolase, pyrimidine binding domain C4J89_RS02025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4J89_RS02025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4J89_RS02030 PF00162 Phosphoglycerate kinase C4J89_RS02045 PF01116 Fructose-bisphosphate aldolase class-II C4J89_RS02055 PF00563 EAL domain C4J89_RS02055 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS02055 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS02060 PF01863 Protein of unknown function DUF45 C4J89_RS02070 PF13673 Acetyltransferase (GNAT) domain C4J89_RS02080 PF12805 FUSC-like inner membrane protein yccS C4J89_RS02095 PF00271 Helicase conserved C-terminal domain C4J89_RS02095 PF00270 DEAD/DEAH box helicase C4J89_RS02095 PF03880 DbpA RNA binding domain C4J89_RS02100 PF07690 Major Facilitator Superfamily C4J89_RS02105 PF00561 alpha/beta hydrolase fold C4J89_RS02120 PF05199 GMC oxidoreductase C4J89_RS02120 PF00732 GMC oxidoreductase C4J89_RS02125 PF00171 Aldehyde dehydrogenase family C4J89_RS02130 PF13977 BetI-type transcriptional repressor, C-terminal C4J89_RS02130 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS02135 PF02028 BCCT, betaine/carnitine/choline family transporter C4J89_RS02140 PF00005 ABC transporter C4J89_RS02140 PF00571 CBS domain C4J89_RS02145 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS02150 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J89_RS02155 PF03313 Serine dehydratase alpha chain C4J89_RS02155 PF03315 Serine dehydratase beta chain C4J89_RS02160 PF07690 Major Facilitator Superfamily C4J89_RS02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS02165 PF03466 LysR substrate binding domain C4J89_RS02180 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J89_RS02180 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J89_RS02195 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J89_RS02195 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J89_RS02205 PF08241 Methyltransferase domain C4J89_RS02210 PF01494 FAD binding domain C4J89_RS02230 PF00221 Aromatic amino acid lyase C4J89_RS02245 PF07977 FabA-like domain C4J89_RS02255 PF00550 Phosphopantetheine attachment site C4J89_RS02260 PF00550 Phosphopantetheine attachment site C4J89_RS02275 PF13614 AAA domain C4J89_RS02285 PF00085 Thioredoxin C4J89_RS02300 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C4J89_RS02305 PF00924 Mechanosensitive ion channel C4J89_RS02305 PF12794 Mechanosensitive ion channel inner membrane domain 1 C4J89_RS02305 PF12795 Mechanosensitive ion channel porin domain C4J89_RS02310 PF03471 Transporter associated domain C4J89_RS02310 PF00999 Sodium/hydrogen exchanger family C4J89_RS02310 PF02080 TrkA-C domain C4J89_RS02315 PF12729 Four helix bundle sensory module for signal transduction C4J89_RS02315 PF00672 HAMP domain C4J89_RS02315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS02330 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS02330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS02330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS02330 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J89_RS02335 PF00171 Aldehyde dehydrogenase family C4J89_RS02335 PF14850 DNA-binding domain of Proline dehydrogenase C4J89_RS02335 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C4J89_RS02335 PF01619 Proline dehydrogenase C4J89_RS02340 PF00474 Sodium:solute symporter family C4J89_RS02345 PF04717 Type VI secretion system, phage-baseplate injector C4J89_RS02355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C4J89_RS02360 PF01625 Peptide methionine sulfoxide reductase C4J89_RS02365 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS02365 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS02365 PF00563 EAL domain C4J89_RS02370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4J89_RS02370 PF02817 e3 binding domain C4J89_RS02370 PF00364 Biotin-requiring enzyme C4J89_RS02375 PF00456 Transketolase, thiamine diphosphate binding domain C4J89_RS02375 PF17831 Pyruvate dehydrogenase E1 component middle domain C4J89_RS02380 PF08335 GlnD PII-uridylyltransferase C4J89_RS02380 PF03710 Glutamate-ammonia ligase adenylyltransferase C4J89_RS02385 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4J89_RS02390 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4J89_RS02395 PF00534 Glycosyl transferases group 1 C4J89_RS02395 PF13439 Glycosyltransferase Family 4 C4J89_RS02420 PF00593 TonB dependent receptor C4J89_RS02420 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS02430 PF16861 Carbamoyltransferase C-terminus C4J89_RS02430 PF02543 Carbamoyltransferase N-terminus C4J89_RS02445 PF13579 Glycosyl transferase 4-like domain C4J89_RS02445 PF00534 Glycosyl transferases group 1 C4J89_RS02450 PF00535 Glycosyl transferase family 2 C4J89_RS02455 PF04932 O-Antigen ligase C4J89_RS02460 PF00005 ABC transporter C4J89_RS02460 PF00664 ABC transporter transmembrane region C4J89_RS02465 PF00294 pfkB family carbohydrate kinase C4J89_RS02465 PF01467 Cytidylyltransferase-like C4J89_RS02470 PF16363 GDP-mannose 4,6 dehydratase C4J89_RS02480 PF00248 Aldo/keto reductase family C4J89_RS02485 PF01266 FAD dependent oxidoreductase C4J89_RS02490 PF00893 Small Multidrug Resistance protein C4J89_RS02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS02495 PF03466 LysR substrate binding domain C4J89_RS02500 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C4J89_RS02505 PF02321 Outer membrane efflux protein C4J89_RS02510 PF13667 ThiC-associated domain C4J89_RS02510 PF01964 Radical SAM ThiC family C4J89_RS02525 PF00293 NUDIX domain C4J89_RS02535 PF00149 Calcineurin-like phosphoesterase C4J89_RS02545 PF07690 Major Facilitator Superfamily C4J89_RS02555 PF05728 Uncharacterised protein family (UPF0227) C4J89_RS02560 PF00986 DNA gyrase B subunit, carboxyl terminus C4J89_RS02560 PF01751 Toprim domain C4J89_RS02560 PF00204 DNA gyrase B C4J89_RS02560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS02570 PF00521 DNA gyrase/topoisomerase IV, subunit A C4J89_RS02570 PF03989 DNA gyrase C-terminal domain, beta-propeller C4J89_RS02590 PF02666 Phosphatidylserine decarboxylase C4J89_RS02595 PF00581 Rhodanese-like domain C4J89_RS02605 PF01618 MotA/TolQ/ExbB proton channel family C4J89_RS02610 PF13677 Membrane MotB of proton-channel complex MotA/MotB C4J89_RS02610 PF00691 OmpA family C4J89_RS02620 PF03193 RsgA GTPase C4J89_RS02625 PF00929 Exonuclease C4J89_RS02630 PF03458 UPF0126 domain C4J89_RS02635 PF08331 Domain of unknown function (DUF1730) C4J89_RS02640 PF01256 Carbohydrate kinase C4J89_RS02640 PF03853 YjeF-related protein N-terminus C4J89_RS02645 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C4J89_RS02650 PF11741 AMIN domain C4J89_RS02650 PF01520 N-acetylmuramoyl-L-alanine amidase C4J89_RS02655 PF01119 DNA mismatch repair protein, C-terminal domain C4J89_RS02655 PF08676 MutL C terminal dimerisation domain C4J89_RS02665 PF17209 Hfq protein C4J89_RS02670 PF01926 50S ribosome-binding GTPase C4J89_RS02670 PF16360 GTP-binding GTPase Middle Region C4J89_RS02670 PF13167 GTP-binding GTPase N-terminal C4J89_RS02675 PF01145 SPFH domain / Band 7 family C4J89_RS02680 PF01145 SPFH domain / Band 7 family C4J89_RS02685 PF13393 Histidyl-tRNA synthetase C4J89_RS02690 PF00709 Adenylosuccinate synthetase C4J89_RS02695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS02695 PF00672 HAMP domain C4J89_RS02695 PF17200 Single Cache domain 2 C4J89_RS02700 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS02705 PF01547 Bacterial extracellular solute-binding protein C4J89_RS02720 PF08206 Ribonuclease B OB domain C4J89_RS02720 PF08461 Ribonuclease R winged-helix domain C4J89_RS02720 PF00773 RNB domain C4J89_RS02720 PF00575 S1 RNA binding domain C4J89_RS02720 PF17876 Cold shock domain C4J89_RS02725 PF00588 SpoU rRNA Methylase family C4J89_RS02725 PF08032 RNA 2'-O ribose methyltransferase substrate binding C4J89_RS02730 PF01250 Ribosomal protein S6 C4J89_RS02735 PF01084 Ribosomal protein S18 C4J89_RS02745 PF03948 Ribosomal protein L9, C-terminal domain C4J89_RS02745 PF01281 Ribosomal protein L9, N-terminal domain C4J89_RS02750 PF00772 DnaB-like helicase N terminal domain C4J89_RS02750 PF03796 DnaB-like helicase C terminal domain C4J89_RS02760 PF08497 Radical SAM N-terminal C4J89_RS02760 PF04055 Radical SAM superfamily C4J89_RS02760 PF11842 Domain of unknown function (DUF3362) C4J89_RS02790 PF04168 A predicted alpha-helical domain with a conserved ER motif. C4J89_RS02790 PF14403 Circularly permuted ATP-grasp type 2 C4J89_RS02805 PF00127 Copper binding proteins, plastocyanin/azurin family C4J89_RS02810 PF02540 NAD synthase C4J89_RS02815 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C4J89_RS02815 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C4J89_RS02820 PF03466 LysR substrate binding domain C4J89_RS02820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS02825 PF00171 Aldehyde dehydrogenase family C4J89_RS02830 PF01266 FAD dependent oxidoreductase C4J89_RS02835 PF13458 Periplasmic binding protein C4J89_RS02840 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS02845 PF11862 Domain of unknown function (DUF3382) C4J89_RS02845 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS02850 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J89_RS02850 PF00005 ABC transporter C4J89_RS02855 PF00005 ABC transporter C4J89_RS02865 PF00106 short chain dehydrogenase C4J89_RS02880 PF04955 HupE / UreJ protein C4J89_RS02885 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J89_RS02890 PF01730 UreF C4J89_RS02895 PF02814 UreE urease accessory protein, N-terminal domain C4J89_RS02895 PF05194 UreE urease accessory protein, C-terminal domain C4J89_RS02900 PF00877 NlpC/P60 family C4J89_RS02905 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS02915 PF05170 AsmA family C4J89_RS02925 PF07769 psiF repeat C4J89_RS02935 PF00012 Hsp70 protein C4J89_RS02940 PF00226 DnaJ domain C4J89_RS02940 PF01556 DnaJ C terminal domain C4J89_RS02945 PF01979 Amidohydrolase family C4J89_RS02945 PF00449 Urease alpha-subunit, N-terminal domain C4J89_RS02950 PF00699 Urease beta subunit C4J89_RS02955 PF13673 Acetyltransferase (GNAT) domain C4J89_RS02965 PF00547 Urease, gamma subunit C4J89_RS02970 PF01774 UreD urease accessory protein C4J89_RS02975 PF00005 ABC transporter C4J89_RS02980 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J89_RS02980 PF00005 ABC transporter C4J89_RS02990 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS02995 PF02954 Bacterial regulatory protein, Fis family C4J89_RS02995 PF00158 Sigma-54 interaction domain C4J89_RS02995 PF13188 PAS domain C4J89_RS03025 PF01381 Helix-turn-helix C4J89_RS03030 PF05973 Phage derived protein Gp49-like (DUF891) C4J89_RS03040 PF02571 Precorrin-6x reductase CbiJ/CobK C4J89_RS03045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J89_RS03055 PF02570 Precorrin-8X methylmutase C4J89_RS03060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J89_RS03065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J89_RS03075 PF01914 MarC family integral membrane protein C4J89_RS03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS03080 PF00672 HAMP domain C4J89_RS03080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J89_RS03080 PF00072 Response regulator receiver domain C4J89_RS03080 PF01627 Hpt domain C4J89_RS03080 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS03085 PF02843 Phosphoribosylglycinamide synthetase, C domain C4J89_RS03085 PF02844 Phosphoribosylglycinamide synthetase, N domain C4J89_RS03085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C4J89_RS03090 PF02142 MGS-like domain C4J89_RS03090 PF01808 AICARFT/IMPCHase bienzyme C4J89_RS03095 PF02954 Bacterial regulatory protein, Fis family C4J89_RS03100 PF01207 Dihydrouridine synthase (Dus) C4J89_RS03120 PF02785 Biotin carboxylase C-terminal domain C4J89_RS03120 PF00289 Biotin carboxylase, N-terminal domain C4J89_RS03120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J89_RS03125 PF00364 Biotin-requiring enzyme C4J89_RS03130 PF01220 Dehydroquinase class II C4J89_RS03135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS03140 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS03140 PF00072 Response regulator receiver domain C4J89_RS03150 PF00293 NUDIX domain C4J89_RS03155 PF01253 Translation initiation factor SUI1 C4J89_RS03160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4J89_RS03160 PF17944 Arginine decarboxylase C-terminal helical extension C4J89_RS03160 PF17810 Arginine decarboxylase helical bundle domain C4J89_RS03165 PF01554 MatE C4J89_RS03170 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C4J89_RS03170 PF07703 Alpha-2-macroglobulin bait region domain C4J89_RS03170 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C4J89_RS03170 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C4J89_RS03170 PF17962 Bacterial macroglobulin domain 6 C4J89_RS03170 PF00207 Alpha-2-macroglobulin family C4J89_RS03170 PF01835 MG2 domain C4J89_RS03170 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C4J89_RS03170 PF07678 A-macroglobulin TED domain C4J89_RS03180 PF06832 Penicillin-Binding Protein C-terminus Family C4J89_RS03180 PF00912 Transglycosylase C4J89_RS03180 PF00905 Penicillin binding protein transpeptidase domain C4J89_RS03190 PF13847 Methyltransferase domain C4J89_RS03210 PF08447 PAS fold C4J89_RS03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS03210 PF08448 PAS fold C4J89_RS03225 PF00072 Response regulator receiver domain C4J89_RS03225 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS03250 PF00437 Type II/IV secretion system protein C4J89_RS03260 PF04972 BON domain C4J89_RS03260 PF00263 Bacterial type II and III secretion system protein C4J89_RS03260 PF13629 Pilus formation protein N terminal region C4J89_RS03275 PF00158 Sigma-54 interaction domain C4J89_RS03275 PF02954 Bacterial regulatory protein, Fis family C4J89_RS03275 PF00072 Response regulator receiver domain C4J89_RS03310 PF00376 MerR family regulatory protein C4J89_RS03310 PF09278 MerR, DNA binding C4J89_RS03315 PF00403 Heavy-metal-associated domain C4J89_RS03335 PF07690 Major Facilitator Superfamily C4J89_RS03340 PF00107 Zinc-binding dehydrogenase C4J89_RS03340 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS03345 PF03992 Antibiotic biosynthesis monooxygenase C4J89_RS03350 PF03466 LysR substrate binding domain C4J89_RS03350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS03360 PF07690 Major Facilitator Superfamily C4J89_RS03365 PF00962 Adenosine/AMP deaminase C4J89_RS03370 PF01699 Sodium/calcium exchanger protein C4J89_RS03375 PF01979 Amidohydrolase family C4J89_RS03385 PF01205 Uncharacterized protein family UPF0029 C4J89_RS03390 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS03390 PF08362 YcdC-like protein, C-terminal region C4J89_RS03395 PF00860 Permease family C4J89_RS03400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS03400 PF03466 LysR substrate binding domain C4J89_RS03405 PF00202 Aminotransferase class-III C4J89_RS03410 PF00171 Aldehyde dehydrogenase family C4J89_RS03445 PF04403 Paraquat-inducible protein A C4J89_RS03450 PF04403 Paraquat-inducible protein A C4J89_RS03455 PF02470 MlaD protein C4J89_RS03480 PF00583 Acetyltransferase (GNAT) family C4J89_RS03490 PF00484 Carbonic anhydrase C4J89_RS03505 PF04185 Phosphoesterase family C4J89_RS03520 PF02667 Short chain fatty acid transporter C4J89_RS03525 PF08946 Osmosensory transporter coiled coil C4J89_RS03525 PF00083 Sugar (and other) transporter C4J89_RS03530 PF13426 PAS domain C4J89_RS03530 PF08447 PAS fold C4J89_RS03530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS03560 PF08281 Sigma-70, region 4 C4J89_RS03560 PF04542 Sigma-70 region 2 C4J89_RS03570 PF00771 FHIPEP family C4J89_RS03580 PF18269 T3SS EscN ATPase C-terminal domain C4J89_RS03580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J89_RS03580 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J89_RS03595 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J89_RS03605 PF01313 Bacterial export proteins, family 3 C4J89_RS03610 PF01311 Bacterial export proteins, family 1 C4J89_RS03615 PF01312 FlhB HrpN YscU SpaS Family C4J89_RS03630 PF03958 Bacterial type II/III secretion system short domain C4J89_RS03630 PF00263 Bacterial type II and III secretion system protein C4J89_RS03655 PF01514 Secretory protein of YscJ/FliF family C4J89_RS03670 PF02954 Bacterial regulatory protein, Fis family C4J89_RS03670 PF00158 Sigma-54 interaction domain C4J89_RS03675 PF06071 Protein of unknown function (DUF933) C4J89_RS03675 PF01926 50S ribosome-binding GTPase C4J89_RS03680 PF01195 Peptidyl-tRNA hydrolase C4J89_RS03685 PF14693 Ribosomal protein TL5, C-terminal domain C4J89_RS03685 PF01386 Ribosomal L25p family C4J89_RS03690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C4J89_RS03690 PF14572 Phosphoribosyl synthetase-associated domain C4J89_RS03700 PF08544 GHMP kinases C terminal C4J89_RS03700 PF00288 GHMP kinases N terminal domain C4J89_RS03705 PF03550 Outer membrane lipoprotein LolB C4J89_RS03715 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C4J89_RS03715 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C4J89_RS03715 PF01488 Shikimate / quinate 5-dehydrogenase C4J89_RS03720 PF03462 PCRF domain C4J89_RS03720 PF00472 RF-1 domain C4J89_RS03725 PF17827 PrmC N-terminal domain C4J89_RS03725 PF05175 Methyltransferase small domain C4J89_RS03730 PF00899 ThiF family C4J89_RS03735 PF01177 Asp/Glu/Hydantoin racemase C4J89_RS03740 PF09411 Lipid A 3-O-deacylase (PagL) C4J89_RS03770 PF00106 short chain dehydrogenase C4J89_RS03775 PF00875 DNA photolyase C4J89_RS03775 PF03441 FAD binding domain of DNA photolyase C4J89_RS03780 PF13411 MerR HTH family regulatory protein C4J89_RS03795 PF01593 Flavin containing amine oxidoreductase C4J89_RS03800 PF08338 Domain of unknown function (DUF1731) C4J89_RS03800 PF01370 NAD dependent epimerase/dehydratase family C4J89_RS03805 PF00762 Ferrochelatase C4J89_RS03810 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS03810 PF00593 TonB dependent receptor C4J89_RS03815 PF13180 PDZ domain C4J89_RS03820 PF01784 NIF3 (NGG1p interacting factor 3) C4J89_RS03830 PF01507 Phosphoadenosine phosphosulfate reductase family C4J89_RS03835 PF00009 Elongation factor Tu GTP binding domain C4J89_RS03840 PF01553 Acyltransferase C4J89_RS03845 PF07085 DRTGG domain C4J89_RS03845 PF01515 Phosphate acetyl/butaryl transferase C4J89_RS03855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J89_RS03860 PF01649 Ribosomal protein S20 C4J89_RS03865 PF03023 Lipid II flippase MurJ C4J89_RS03870 PF06574 FAD synthetase C4J89_RS03870 PF01687 Riboflavin kinase C4J89_RS03875 PF00133 tRNA synthetases class I (I, L, M and V) C4J89_RS03875 PF06827 Zinc finger found in FPG and IleRS C4J89_RS03875 PF08264 Anticodon-binding domain of tRNA C4J89_RS03880 PF01252 Signal peptidase (SPase) II C4J89_RS03885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J89_RS03890 PF02401 LytB protein C4J89_RS03895 PF08334 Type II secretion system (T2SS), protein G C4J89_RS03895 PF07963 Prokaryotic N-terminal methylation motif C4J89_RS03915 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor C4J89_RS03915 PF07963 Prokaryotic N-terminal methylation motif C4J89_RS03920 PF01266 FAD dependent oxidoreductase C4J89_RS03930 PF13525 Outer membrane lipoprotein C4J89_RS03935 PF01479 S4 domain C4J89_RS03935 PF00849 RNA pseudouridylate synthase C4J89_RS03940 PF02578 Multi-copper polyphenol oxidoreductase laccase C4J89_RS03945 PF10431 C-terminal, D2-small domain, of ClpB protein C4J89_RS03945 PF02861 Clp amino terminal domain, pathogenicity island component C4J89_RS03945 PF17871 AAA lid domain C4J89_RS03945 PF07724 AAA domain (Cdc48 subfamily) C4J89_RS03945 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS03970 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS03995 PF03884 DNA gyrase inhibitor YacG C4J89_RS04000 PF01121 Dephospho-CoA kinase C4J89_RS04005 PF01478 Type IV leader peptidase family C4J89_RS04005 PF06750 Bacterial Peptidase A24 N-terminal domain C4J89_RS04010 PF00482 Type II secretion system (T2SS), protein F C4J89_RS04015 PF07963 Prokaryotic N-terminal methylation motif C4J89_RS04015 PF00114 Pilin (bacterial filament) C4J89_RS04030 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C4J89_RS04030 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C4J89_RS04040 PF01510 N-acetylmuramoyl-L-alanine amidase C4J89_RS04050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS04050 PF00672 HAMP domain C4J89_RS04060 PF01026 TatD related DNase C4J89_RS04065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J89_RS04065 PF00356 Bacterial regulatory proteins, lacI family C4J89_RS04070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C4J89_RS04070 PF00381 PTS HPr component phosphorylation site C4J89_RS04070 PF05524 PEP-utilising enzyme, N-terminal C4J89_RS04070 PF00391 PEP-utilising enzyme, mobile domain C4J89_RS04070 PF02896 PEP-utilising enzyme, TIM barrel domain C4J89_RS04075 PF00294 pfkB family carbohydrate kinase C4J89_RS04080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C4J89_RS04080 PF02378 Phosphotransferase system, EIIC C4J89_RS04085 PF09423 PhoD-like phosphatase C4J89_RS04085 PF16655 PhoD-like phosphatase, N-terminal domain C4J89_RS04090 PF00667 FAD binding domain C4J89_RS04090 PF00175 Oxidoreductase NAD-binding domain C4J89_RS04090 PF00258 Flavodoxin C4J89_RS04095 PF00593 TonB dependent receptor C4J89_RS04095 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS04100 PF18331 PKHD-type hydroxylase C-terminal domain C4J89_RS04100 PF13640 2OG-Fe(II) oxygenase superfamily C4J89_RS04110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4J89_RS04110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4J89_RS04115 PF00005 ABC transporter C4J89_RS04115 PF00571 CBS domain C4J89_RS04120 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS04125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J89_RS04130 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS04135 PF16658 Class II release factor RF3, C-terminal domain C4J89_RS04135 PF03144 Elongation factor Tu domain 2 C4J89_RS04135 PF00009 Elongation factor Tu GTP binding domain C4J89_RS04140 PF09334 tRNA synthetases class I (M) C4J89_RS04140 PF13603 Leucyl-tRNA synthetase, Domain 2 C4J89_RS04140 PF00133 tRNA synthetases class I (I, L, M and V) C4J89_RS04140 PF08264 Anticodon-binding domain of tRNA C4J89_RS04175 PF00248 Aldo/keto reductase family C4J89_RS04225 PF00005 ABC transporter C4J89_RS04225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J89_RS04230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J89_RS04230 PF00005 ABC transporter C4J89_RS04235 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS04235 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J89_RS04240 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS04245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J89_RS04250 PF03573 outer membrane porin, OprD family C4J89_RS04255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J89_RS04260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J89_RS04265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J89_RS04275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS04275 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS04280 PF00072 Response regulator receiver domain C4J89_RS04280 PF02954 Bacterial regulatory protein, Fis family C4J89_RS04285 PF00005 ABC transporter C4J89_RS04285 PF06472 ABC transporter transmembrane region 2 C4J89_RS04300 PF00579 tRNA synthetases class I (W and Y) C4J89_RS04305 PF03969 AFG1-like ATPase C4J89_RS04315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS04315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS04315 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS04325 PF00248 Aldo/keto reductase family C4J89_RS04330 PF00572 Ribosomal protein L13 C4J89_RS04335 PF00380 Ribosomal protein S9/S16 C4J89_RS04340 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C4J89_RS04340 PF00355 Rieske [2Fe-2S] domain C4J89_RS04345 PF00032 Cytochrome b(C-terminal)/b6/petD C4J89_RS04345 PF00033 Cytochrome b/b6/petB C4J89_RS04350 PF02167 Cytochrome C1 family C4J89_RS04355 PF00043 Glutathione S-transferase, C-terminal domain C4J89_RS04355 PF02798 Glutathione S-transferase, N-terminal domain C4J89_RS04360 PF04386 Stringent starvation protein B C4J89_RS04365 PF07729 FCD domain C4J89_RS04365 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS04380 PF00701 Dihydrodipicolinate synthetase family C4J89_RS04385 PF00171 Aldehyde dehydrogenase family C4J89_RS04390 PF07690 Major Facilitator Superfamily C4J89_RS04395 PF08666 SAF domain C4J89_RS04395 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C4J89_RS04405 PF01699 Sodium/calcium exchanger protein C4J89_RS04410 PF03330 Lytic transglycolase C4J89_RS04410 PF05036 Sporulation related domain C4J89_RS04415 PF02637 GatB domain C4J89_RS04415 PF02934 GatB/GatE catalytic domain C4J89_RS04420 PF01425 Amidase C4J89_RS04425 PF02686 Glu-tRNAGln amidotransferase C subunit C4J89_RS04435 PF04085 rod shape-determining protein MreC C4J89_RS04445 PF02545 Maf-like protein C4J89_RS04450 PF00575 S1 RNA binding domain C4J89_RS04450 PF10150 Ribonuclease E/G family C4J89_RS04460 PF00795 Carbon-nitrogen hydrolase C4J89_RS04465 PF01523 Putative modulator of DNA gyrase C4J89_RS04470 PF04751 Protein of unknown function (DUF615) C4J89_RS04475 PF01523 Putative modulator of DNA gyrase C4J89_RS04485 PF00206 Lyase C4J89_RS04485 PF10415 Fumarase C C-terminus C4J89_RS04495 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C4J89_RS04495 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C4J89_RS04500 PF02535 ZIP Zinc transporter C4J89_RS04505 PF00381 PTS HPr component phosphorylation site C4J89_RS04510 PF03668 P-loop ATPase protein family C4J89_RS04515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C4J89_RS04520 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C4J89_RS04525 PF04552 Sigma-54, DNA binding domain C4J89_RS04525 PF00309 Sigma-54 factor, Activator interacting domain (AID) C4J89_RS04525 PF04963 Sigma-54 factor, core binding domain C4J89_RS04530 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J89_RS04530 PF00005 ABC transporter C4J89_RS04535 PF03968 OstA-like protein C4J89_RS04550 PF00571 CBS domain C4J89_RS04550 PF01380 SIS domain C4J89_RS04555 PF00005 ABC transporter C4J89_RS04560 PF02405 Permease MlaE C4J89_RS04565 PF02470 MlaD protein C4J89_RS04570 PF05494 MlaC protein C4J89_RS04585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4J89_RS04595 PF01634 ATP phosphoribosyltransferase C4J89_RS04600 PF00815 Histidinol dehydrogenase C4J89_RS04605 PF00155 Aminotransferase class I and II C4J89_RS04610 PF00860 Permease family C4J89_RS04620 PF00156 Phosphoribosyl transferase domain C4J89_RS04635 PF06039 Malate:quinone oxidoreductase (Mqo) C4J89_RS04675 PF02586 SOS response associated peptidase (SRAP) C4J89_RS04680 PF01435 Peptidase family M48 C4J89_RS04685 PF01169 Uncharacterized protein family UPF0016 C4J89_RS04690 PF05175 Methyltransferase small domain C4J89_RS04690 PF08468 Methyltransferase small domain N-terminal C4J89_RS04695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J89_RS04695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS04700 PF01810 LysE type translocator C4J89_RS04705 PF00501 AMP-binding enzyme C4J89_RS04705 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS04715 PF07044 Protein of unknown function (DUF1329) C4J89_RS04725 PF00069 Protein kinase domain C4J89_RS04725 PF13191 AAA ATPase domain C4J89_RS04735 PF02470 MlaD protein C4J89_RS04740 PF04403 Paraquat-inducible protein A C4J89_RS04750 PF00691 OmpA family C4J89_RS04750 PF13488 Glycine zipper C4J89_RS04755 PF04972 BON domain C4J89_RS04760 PF13580 SIS domain C4J89_RS04765 PF02021 Uncharacterised protein family UPF0102 C4J89_RS04770 PF04348 LppC putative lipoprotein C4J89_RS04775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J89_RS04785 PF02381 MraZ protein, putative antitoxin-like C4J89_RS04790 PF01795 MraW methylase family C4J89_RS04795 PF04999 Cell division protein FtsL C4J89_RS04800 PF03717 Penicillin-binding Protein dimerisation domain C4J89_RS04800 PF00905 Penicillin binding protein transpeptidase domain C4J89_RS04805 PF01225 Mur ligase family, catalytic domain C4J89_RS04805 PF02875 Mur ligase family, glutamate ligase domain C4J89_RS04805 PF08245 Mur ligase middle domain C4J89_RS04810 PF01225 Mur ligase family, catalytic domain C4J89_RS04810 PF02875 Mur ligase family, glutamate ligase domain C4J89_RS04810 PF08245 Mur ligase middle domain C4J89_RS04815 PF00953 Glycosyl transferase family 4 C4J89_RS04815 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C4J89_RS04820 PF08245 Mur ligase middle domain C4J89_RS04820 PF02875 Mur ligase family, glutamate ligase domain C4J89_RS04825 PF01098 Cell cycle protein C4J89_RS04830 PF03033 Glycosyltransferase family 28 N-terminal domain C4J89_RS04830 PF04101 Glycosyltransferase family 28 C-terminal domain C4J89_RS04835 PF01225 Mur ligase family, catalytic domain C4J89_RS04835 PF02875 Mur ligase family, glutamate ligase domain C4J89_RS04835 PF08245 Mur ligase middle domain C4J89_RS04840 PF01820 D-ala D-ala ligase N-terminus C4J89_RS04840 PF07478 D-ala D-ala ligase C-terminus C4J89_RS04845 PF08478 POTRA domain, FtsQ-type C4J89_RS04845 PF03799 Cell division protein FtsQ C4J89_RS04850 PF02491 SHS2 domain inserted in FTSA C4J89_RS04855 PF00091 Tubulin/FtsZ family, GTPase domain C4J89_RS04855 PF12327 FtsZ family, C-terminal domain C4J89_RS04860 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C4J89_RS04865 PF00563 EAL domain C4J89_RS04865 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS04865 PF01590 GAF domain C4J89_RS04865 PF00360 Phytochrome region C4J89_RS04870 PF03573 outer membrane porin, OprD family C4J89_RS04875 PF00672 HAMP domain C4J89_RS04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS04875 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS04880 PF00072 Response regulator receiver domain C4J89_RS04880 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS04885 PF00873 AcrB/AcrD/AcrF family C4J89_RS04890 PF13533 Biotin-lipoyl like C4J89_RS04900 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS04915 PF01584 CheW-like domain C4J89_RS04915 PF00072 Response regulator receiver domain C4J89_RS04920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS04920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J89_RS04925 PF03466 LysR substrate binding domain C4J89_RS04925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS04930 PF02321 Outer membrane efflux protein C4J89_RS04935 PF04632 Fusaric acid resistance protein family C4J89_RS04945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J89_RS04945 PF00529 HlyD membrane-fusion protein of T1SS C4J89_RS04955 PF00106 short chain dehydrogenase C4J89_RS04970 PF00483 Nucleotidyl transferase C4J89_RS04970 PF01050 Mannose-6-phosphate isomerase C4J89_RS04975 PF11182 Alginate O-acetyl transferase AlgF C4J89_RS04980 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX C4J89_RS04985 PF03062 MBOAT, membrane-bound O-acyltransferase family C4J89_RS04990 PF05426 Alginate lyase C4J89_RS04995 PF16824 C-terminal carbohydrate-binding module C4J89_RS04995 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX C4J89_RS05000 PF05048 Periplasmic copper-binding protein (NosD) C4J89_RS05005 PF13372 Alginate export C4J89_RS05010 PF08238 Sel1 repeat C4J89_RS05020 PF07238 PilZ domain C4J89_RS05035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4J89_RS05035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4J89_RS05035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4J89_RS05040 PF03883 Peroxide stress protein YaaA C4J89_RS05050 PF02562 PhoH-like protein C4J89_RS05050 PF13638 PIN domain C4J89_RS05055 PF01967 MoaC family C4J89_RS05060 PF02597 ThiS family C4J89_RS05065 PF02391 MoaE protein C4J89_RS05080 PF00271 Helicase conserved C-terminal domain C4J89_RS05080 PF00270 DEAD/DEAH box helicase C4J89_RS05085 PF02230 Phospholipase/Carboxylesterase C4J89_RS05090 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS05105 PF00005 ABC transporter C4J89_RS05115 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS05115 PF07729 FCD domain C4J89_RS05120 PF07690 Major Facilitator Superfamily C4J89_RS05125 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS05125 PF01627 Hpt domain C4J89_RS05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS05125 PF00989 PAS fold C4J89_RS05125 PF00072 Response regulator receiver domain C4J89_RS05125 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS05130 PF00072 Response regulator receiver domain C4J89_RS05130 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS05140 PF01541 GIY-YIG catalytic domain C4J89_RS05145 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS05150 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C4J89_RS05160 PF04209 homogentisate 1,2-dioxygenase C4J89_RS05165 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4J89_RS05170 PF13417 Glutathione S-transferase, N-terminal domain C4J89_RS05175 PF07690 Major Facilitator Superfamily C4J89_RS05180 PF13369 Transglutaminase-like superfamily C4J89_RS05185 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C4J89_RS05185 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C4J89_RS05205 PF06146 Phosphate-starvation-inducible E C4J89_RS05215 PF03315 Serine dehydratase beta chain C4J89_RS05215 PF03313 Serine dehydratase alpha chain C4J89_RS05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS05220 PF03466 LysR substrate binding domain C4J89_RS05230 PF07690 Major Facilitator Superfamily C4J89_RS05235 PF03466 LysR substrate binding domain C4J89_RS05235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS05240 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS05240 PF07660 Secretin and TonB N terminus short domain C4J89_RS05240 PF00593 TonB dependent receptor C4J89_RS05245 PF04773 FecR protein C4J89_RS05245 PF16220 Domain of unknown function (DUF4880) C4J89_RS05250 PF08281 Sigma-70, region 4 C4J89_RS05250 PF04542 Sigma-70 region 2 C4J89_RS05285 PF04245 37-kD nucleoid-associated bacterial protein C4J89_RS05290 PF00216 Bacterial DNA-binding protein C4J89_RS05295 PF05971 RNA methyltransferase C4J89_RS05300 PF00133 tRNA synthetases class I (I, L, M and V) C4J89_RS05300 PF10458 Valyl tRNA synthetase tRNA binding arm C4J89_RS05300 PF08264 Anticodon-binding domain of tRNA C4J89_RS05310 PF04364 DNA polymerase III chi subunit, HolC C4J89_RS05315 PF00883 Cytosol aminopeptidase family, catalytic domain C4J89_RS05315 PF02789 Cytosol aminopeptidase family, N-terminal domain C4J89_RS05320 PF03739 Lipopolysaccharide export system permease LptF/LptG C4J89_RS05325 PF03739 Lipopolysaccharide export system permease LptF/LptG C4J89_RS05330 PF00009 Elongation factor Tu GTP binding domain C4J89_RS05330 PF00679 Elongation factor G C-terminus C4J89_RS05330 PF03144 Elongation factor Tu domain 2 C4J89_RS05330 PF06421 GTP-binding protein LepA C-terminus C4J89_RS05335 PF10502 Signal peptidase, peptidase S26 C4J89_RS05340 PF00035 Double-stranded RNA binding motif C4J89_RS05340 PF14622 Ribonuclease-III-like C4J89_RS05345 PF01926 50S ribosome-binding GTPase C4J89_RS05345 PF07650 KH domain C4J89_RS05350 PF02565 Recombination protein O C terminal C4J89_RS05350 PF11967 Recombination protein O N terminal C4J89_RS05355 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C4J89_RS05360 PF00394 Multicopper oxidase C4J89_RS05360 PF07731 Multicopper oxidase C4J89_RS05360 PF07732 Multicopper oxidase C4J89_RS05365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C4J89_RS05370 PF08003 Protein of unknown function (DUF1698) C4J89_RS05375 PF13649 Methyltransferase domain C4J89_RS05390 PF05362 Lon protease (S16) C-terminal proteolytic domain C4J89_RS05390 PF02190 ATP-dependent protease La (LON) substrate-binding domain C4J89_RS05390 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS05400 PF01425 Amidase C4J89_RS05405 PF01522 Polysaccharide deacetylase C4J89_RS05410 PF07690 Major Facilitator Superfamily C4J89_RS05430 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J89_RS05430 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J89_RS05440 PF01011 PQQ enzyme repeat C4J89_RS05445 PF00593 TonB dependent receptor C4J89_RS05445 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS05450 PF09905 DNA-binding protein VF530 C4J89_RS05470 PF03551 Transcriptional regulator PadR-like family C4J89_RS05510 PF14496 C-terminal novel E3 ligase, LRR-interacting C4J89_RS05510 PF12468 Type III secretion system leucine rich repeat protein C4J89_RS05520 PF00324 Amino acid permease C4J89_RS05530 PF01645 Conserved region in glutamate synthase C4J89_RS05540 PF13188 PAS domain C4J89_RS05540 PF00072 Response regulator receiver domain C4J89_RS05540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS05540 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS05540 PF08448 PAS fold C4J89_RS05545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS05550 PF03150 Di-haem cytochrome c peroxidase C4J89_RS05550 PF00034 Cytochrome c C4J89_RS05550 PF14376 Haem-binding domain C4J89_RS05555 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS05555 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS05555 PF00563 EAL domain C4J89_RS05560 PF00072 Response regulator receiver domain C4J89_RS05565 PF00293 NUDIX domain C4J89_RS05585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS05585 PF03466 LysR substrate binding domain C4J89_RS05590 PF00561 alpha/beta hydrolase fold C4J89_RS05610 PF00892 EamA-like transporter family C4J89_RS05625 PF00202 Aminotransferase class-III C4J89_RS05630 PF12146 Serine aminopeptidase, S33 C4J89_RS05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS05640 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS05645 PF02954 Bacterial regulatory protein, Fis family C4J89_RS05645 PF00072 Response regulator receiver domain C4J89_RS05645 PF00158 Sigma-54 interaction domain C4J89_RS05650 PF06942 GlpM protein C4J89_RS05655 PF00072 Response regulator receiver domain C4J89_RS05655 PF00158 Sigma-54 interaction domain C4J89_RS05655 PF02954 Bacterial regulatory protein, Fis family C4J89_RS05660 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS05660 PF02743 Cache domain C4J89_RS05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS05665 PF00005 ABC transporter C4J89_RS05670 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS05680 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS05685 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C4J89_RS05685 PF01266 FAD dependent oxidoreductase C4J89_RS05690 PF00455 DeoR C terminal sensor domain C4J89_RS05690 PF08220 DeoR-like helix-turn-helix domain C4J89_RS05695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J89_RS05695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J89_RS05700 PF00230 Major intrinsic protein C4J89_RS05705 PF04073 Aminoacyl-tRNA editing domain C4J89_RS05710 PF00005 ABC transporter C4J89_RS05710 PF08402 TOBE domain C4J89_RS05715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4J89_RS05715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4J89_RS05725 PF01568 Molydopterin dinucleotide binding domain C4J89_RS05725 PF00384 Molybdopterin oxidoreductase C4J89_RS05725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4J89_RS05730 PF00462 Glutaredoxin C4J89_RS05735 PF00210 Ferritin-like domain C4J89_RS05740 PF04324 BFD-like [2Fe-2S] binding domain C4J89_RS05745 PF00578 AhpC/TSA family C4J89_RS05745 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4J89_RS05750 PF00929 Exonuclease C4J89_RS05755 PF01979 Amidohydrolase family C4J89_RS05765 PF00764 Arginosuccinate synthase C4J89_RS05770 PF01609 Transposase DDE domain C4J89_RS05770 PF01609 Transposase DDE domain C4J89_RS05770 PF13006 Insertion element 4 transposase N-terminal C4J89_RS05770 PF13006 Insertion element 4 transposase N-terminal C4J89_RS05775 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS05775 PF00072 Response regulator receiver domain C4J89_RS05785 PF10576 Iron-sulfur binding domain of endonuclease III C4J89_RS05785 PF00730 HhH-GPD superfamily base excision DNA repair protein C4J89_RS05785 PF00633 Helix-hairpin-helix motif C4J89_RS05790 PF04060 Putative Fe-S cluster C4J89_RS05795 PF09334 tRNA synthetases class I (M) C4J89_RS05795 PF01588 Putative tRNA binding domain C4J89_RS05800 PF10609 NUBPL iron-transfer P-loop NTPase C4J89_RS05805 PF00037 4Fe-4S binding domain C4J89_RS05805 PF11953 Domain of unknown function (DUF3470) C4J89_RS05810 PF05192 MutS domain III C4J89_RS05810 PF00488 MutS domain V C4J89_RS05810 PF05190 MutS family domain IV C4J89_RS05810 PF05188 MutS domain II C4J89_RS05810 PF01624 MutS domain I C4J89_RS05825 PF00717 Peptidase S24-like C4J89_RS05825 PF01381 Helix-turn-helix C4J89_RS05910 PF00182 Chitinase class I C4J89_RS05920 PF02464 Competence-damaged protein C4J89_RS05925 PF00154 recA bacterial DNA recombination protein C4J89_RS05930 PF02631 RecX family C4J89_RS05945 PF03942 DTW domain C4J89_RS05950 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS05950 PF00072 Response regulator receiver domain C4J89_RS05955 PF01219 Prokaryotic diacylglycerol kinase C4J89_RS05960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS05960 PF03466 LysR substrate binding domain C4J89_RS05965 PF00970 Oxidoreductase FAD-binding domain C4J89_RS05965 PF00175 Oxidoreductase NAD-binding domain C4J89_RS05970 PF18389 TrmO C-terminal domain C4J89_RS05970 PF01980 tRNA-methyltransferase O C4J89_RS05975 PF07308 Protein of unknown function (DUF1456) C4J89_RS05985 PF00958 GMP synthase C terminal domain C4J89_RS05985 PF00117 Glutamine amidotransferase class-I C4J89_RS05985 PF13673 Acetyltransferase (GNAT) domain C4J89_RS05985 PF13302 Acetyltransferase (GNAT) domain C4J89_RS05985 PF03352 Methyladenine glycosylase C4J89_RS05990 PF18693 TRAM domain C4J89_RS05990 PF04055 Radical SAM superfamily C4J89_RS05990 PF00919 Uncharacterized protein family UPF0004 C4J89_RS06010 PF02705 K+ potassium transporter C4J89_RS06015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J89_RS06025 PF04349 Periplasmic glucan biosynthesis protein, MdoG C4J89_RS06035 PF00672 HAMP domain C4J89_RS06035 PF12729 Four helix bundle sensory module for signal transduction C4J89_RS06035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS06045 PF01739 CheR methyltransferase, SAM binding domain C4J89_RS06055 PF00072 Response regulator receiver domain C4J89_RS06055 PF01627 Hpt domain C4J89_RS06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS06055 PF01584 CheW-like domain C4J89_RS06060 PF01339 CheB methylesterase C4J89_RS06060 PF00072 Response regulator receiver domain C4J89_RS06065 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS06065 PF00563 EAL domain C4J89_RS06065 PF00360 Phytochrome region C4J89_RS06065 PF01590 GAF domain C4J89_RS06075 PF00152 tRNA synthetases class II (D, K and N) C4J89_RS06075 PF01336 OB-fold nucleic acid binding domain C4J89_RS06090 PF12146 Serine aminopeptidase, S33 C4J89_RS06110 PF13488 Glycine zipper C4J89_RS06110 PF00691 OmpA family C4J89_RS06125 PF00311 Phosphoenolpyruvate carboxylase C4J89_RS06130 PF05191 Adenylate kinase, active site lid C4J89_RS06135 PF00814 Glycoprotease family C4J89_RS06145 PF01904 Protein of unknown function DUF72 C4J89_RS06165 PF04445 Putative SAM-dependent methyltransferase C4J89_RS06175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J89_RS06180 PF00873 AcrB/AcrD/AcrF family C4J89_RS06200 PF01553 Acyltransferase C4J89_RS06205 PF00313 'Cold-shock' DNA-binding domain C4J89_RS06215 PF13847 Methyltransferase domain C4J89_RS06220 PF07687 Peptidase dimerisation domain C4J89_RS06220 PF01546 Peptidase family M20/M25/M40 C4J89_RS06225 PF07238 PilZ domain C4J89_RS06225 PF00535 Glycosyl transferase family 2 C4J89_RS06225 PF03552 Cellulose synthase C4J89_RS06230 PF00899 ThiF family C4J89_RS06235 PF02657 Fe-S metabolism associated domain C4J89_RS06240 PF00266 Aminotransferase class-V C4J89_RS06245 PF14602 Hexapeptide repeat of succinyl-transferase C4J89_RS06245 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle C4J89_RS06250 PF03960 ArsC family C4J89_RS06255 PF00999 Sodium/hydrogen exchanger family C4J89_RS06265 PF00155 Aminotransferase class I and II C4J89_RS06270 PF01966 HD domain C4J89_RS06270 PF01909 Nucleotidyltransferase domain C4J89_RS06270 PF01842 ACT domain C4J89_RS06270 PF08335 GlnD PII-uridylyltransferase C4J89_RS06275 PF00557 Metallopeptidase family M24 C4J89_RS06280 PF00318 Ribosomal protein S2 C4J89_RS06285 PF00889 Elongation factor TS C4J89_RS06290 PF00696 Amino acid kinase family C4J89_RS06295 PF01765 Ribosome recycling factor C4J89_RS06300 PF01255 Putative undecaprenyl diphosphate synthase C4J89_RS06310 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C4J89_RS06310 PF13288 DXP reductoisomerase C-terminal domain C4J89_RS06310 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C4J89_RS06315 PF02163 Peptidase family M50 C4J89_RS06315 PF17820 PDZ domain C4J89_RS06315 PF13180 PDZ domain C4J89_RS06320 PF01103 Surface antigen C4J89_RS06320 PF07244 Surface antigen variable number repeat C4J89_RS06325 PF03938 Outer membrane protein (OmpH-like) C4J89_RS06330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C4J89_RS06330 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS06335 PF07977 FabA-like domain C4J89_RS06340 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS06340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C4J89_RS06345 PF02684 Lipid-A-disaccharide synthetase C4J89_RS06350 PF01351 Ribonuclease HII C4J89_RS06355 PF07733 Bacterial DNA polymerase III alpha NTPase domain C4J89_RS06355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C4J89_RS06355 PF14579 Helix-hairpin-helix motif C4J89_RS06355 PF02811 PHP domain C4J89_RS06355 PF01336 OB-fold nucleic acid binding domain C4J89_RS06360 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C4J89_RS06365 PF11734 TilS substrate C-terminal domain C4J89_RS06365 PF09179 TilS substrate binding domain C4J89_RS06365 PF01171 PP-loop family C4J89_RS06370 PF00117 Glutamine amidotransferase class-I C4J89_RS06370 PF06418 CTP synthase N-terminus C4J89_RS06375 PF00793 DAHP synthetase I family C4J89_RS06380 PF00113 Enolase, C-terminal TIM barrel domain C4J89_RS06380 PF03952 Enolase, N-terminal domain C4J89_RS06385 PF04977 Septum formation initiator C4J89_RS06390 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C4J89_RS06395 PF03466 LysR substrate binding domain C4J89_RS06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS06400 PF00107 Zinc-binding dehydrogenase C4J89_RS06400 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS06405 PF00756 Putative esterase C4J89_RS06410 PF02542 YgbB family C4J89_RS06415 PF01142 tRNA pseudouridine synthase D (TruD) C4J89_RS06420 PF01975 Survival protein SurE C4J89_RS06430 PF01551 Peptidase family M23 C4J89_RS06430 PF01476 LysM domain C4J89_RS06435 PF04539 Sigma-70 region 3 C4J89_RS06435 PF04542 Sigma-70 region 2 C4J89_RS06435 PF00140 Sigma-70 factor, region 1.2 C4J89_RS06435 PF04545 Sigma-70, region 4 C4J89_RS06440 PF00313 'Cold-shock' DNA-binding domain C4J89_RS06445 PF00692 dUTPase C4J89_RS06460 PF08494 DEAD/H associated C4J89_RS06460 PF00271 Helicase conserved C-terminal domain C4J89_RS06460 PF00270 DEAD/DEAH box helicase C4J89_RS06465 PF00005 ABC transporter C4J89_RS06475 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS06485 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS06490 PF01068 ATP dependent DNA ligase domain C4J89_RS06490 PF04675 DNA ligase N terminus C4J89_RS06490 PF04679 ATP dependent DNA ligase C terminal region C4J89_RS06500 PF01804 Penicillin amidase C4J89_RS06505 PF01043 SecA preprotein cross-linking domain C4J89_RS06505 PF07516 SecA Wing and Scaffold domain C4J89_RS06505 PF07517 SecA DEAD-like domain C4J89_RS06505 PF02810 SEC-C motif C4J89_RS06515 PF02810 SEC-C motif C4J89_RS06535 PF06733 DEAD_2 C4J89_RS06535 PF13307 Helicase C-terminal domain C4J89_RS06540 PF02449 Beta-galactosidase C4J89_RS06540 PF17992 Agarase CBM like domain C4J89_RS06545 PF00144 Beta-lactamase C4J89_RS06550 PF04972 BON domain C4J89_RS06550 PF00691 OmpA family C4J89_RS06555 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C4J89_RS06555 PF01243 Pyridoxamine 5'-phosphate oxidase C4J89_RS06565 PF06965 Na+/H+ antiporter 1 C4J89_RS06600 PF03466 LysR substrate binding domain C4J89_RS06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS06615 PF05114 Protein of unknown function (DUF692) C4J89_RS06625 PF00005 ABC transporter C4J89_RS06630 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J89_RS06630 PF00005 ABC transporter C4J89_RS06635 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS06635 PF11862 Domain of unknown function (DUF3382) C4J89_RS06640 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS06645 PF13458 Periplasmic binding protein C4J89_RS06660 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS06660 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS06660 PF00563 EAL domain C4J89_RS06665 PF03692 Putative zinc- or iron-chelating domain C4J89_RS06670 PF07690 Major Facilitator Superfamily C4J89_RS06675 PF18339 RapA N-terminal Tudor like domain 1 C4J89_RS06675 PF00176 SNF2 family N-terminal domain C4J89_RS06675 PF18337 RapA N-terminal Tudor like domain C4J89_RS06675 PF00271 Helicase conserved C-terminal domain C4J89_RS06675 PF12137 RNA polymerase recycling family C-terminal C4J89_RS06690 PF01384 Phosphate transporter family C4J89_RS06700 PF01614 Bacterial transcriptional regulator C4J89_RS06700 PF09339 IclR helix-turn-helix domain C4J89_RS06705 PF07690 Major Facilitator Superfamily C4J89_RS06710 PF01144 Coenzyme A transferase C4J89_RS06715 PF01144 Coenzyme A transferase C4J89_RS06720 PF02803 Thiolase, C-terminal domain C4J89_RS06720 PF00108 Thiolase, N-terminal domain C4J89_RS06725 PF00775 Dioxygenase C4J89_RS06725 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C4J89_RS06730 PF00775 Dioxygenase C4J89_RS06735 PF00083 Sugar (and other) transporter C4J89_RS06740 PF10397 Adenylosuccinate lyase C-terminus C4J89_RS06740 PF00206 Lyase C4J89_RS06745 PF12146 Serine aminopeptidase, S33 C4J89_RS06750 PF02627 Carboxymuconolactone decarboxylase family C4J89_RS06760 PF03573 outer membrane porin, OprD family C4J89_RS06775 PF00012 Hsp70 protein C4J89_RS06780 PF02321 Outer membrane efflux protein C4J89_RS06785 PF00873 AcrB/AcrD/AcrF family C4J89_RS06790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J89_RS06790 PF00529 HlyD membrane-fusion protein of T1SS C4J89_RS06795 PF08361 MAATS-type transcriptional repressor, C-terminal region C4J89_RS06795 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS06815 PF03358 NADPH-dependent FMN reductase C4J89_RS06820 PF00892 EamA-like transporter family C4J89_RS06830 PF00425 chorismate binding enzyme C4J89_RS06830 PF04715 Anthranilate synthase component I, N terminal region C4J89_RS06835 PF00117 Glutamine amidotransferase class-I C4J89_RS06840 PF03472 Autoinducer binding domain C4J89_RS06840 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS06845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J89_RS06885 PF13091 PLD-like domain C4J89_RS06895 PF14310 Fibronectin type III-like domain C4J89_RS06895 PF01915 Glycosyl hydrolase family 3 C-terminal domain C4J89_RS06895 PF00933 Glycosyl hydrolase family 3 N terminal domain C4J89_RS06925 PF00465 Iron-containing alcohol dehydrogenase C4J89_RS06935 PF03466 LysR substrate binding domain C4J89_RS06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS06940 PF02515 CoA-transferase family III C4J89_RS06945 PF00682 HMGL-like C4J89_RS06950 PF07690 Major Facilitator Superfamily C4J89_RS06960 PF03466 LysR substrate binding domain C4J89_RS06960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS06975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J89_RS07000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C4J89_RS07000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C4J89_RS07010 PF00561 alpha/beta hydrolase fold C4J89_RS07015 PF01479 S4 domain C4J89_RS07015 PF00849 RNA pseudouridylate synthase C4J89_RS07040 PF03167 Uracil DNA glycosylase superfamily C4J89_RS07055 PF01970 Tripartite tricarboxylate transporter TctA family C4J89_RS07070 PF00072 Response regulator receiver domain C4J89_RS07070 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS07075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS07075 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS07085 PF01571 Aminomethyltransferase folate-binding domain C4J89_RS07090 PF03937 Flavinator of succinate dehydrogenase C4J89_RS07100 PF00890 FAD binding domain C4J89_RS07100 PF02910 Fumarate reductase flavoprotein C-term C4J89_RS07105 PF08281 Sigma-70, region 4 C4J89_RS07105 PF04542 Sigma-70 region 2 C4J89_RS07110 PF03872 Anti sigma-E protein RseA, N-terminal domain C4J89_RS07110 PF03873 Anti sigma-E protein RseA, C-terminal domain C4J89_RS07115 PF17188 MucB/RseB C-terminal domain C4J89_RS07115 PF03888 MucB/RseB N-terminal domain C4J89_RS07120 PF13180 PDZ domain C4J89_RS07125 PF01435 Peptidase family M48 C4J89_RS07130 PF01206 Sulfurtransferase TusA C4J89_RS07135 PF00578 AhpC/TSA family C4J89_RS07145 PF00701 Dihydrodipicolinate synthetase family C4J89_RS07150 PF06804 NlpB/DapX lipoprotein C4J89_RS07155 PF00753 Metallo-beta-lactamase superfamily C4J89_RS07160 PF01259 SAICAR synthetase C4J89_RS07185 PF07690 Major Facilitator Superfamily C4J89_RS07200 PF03466 LysR substrate binding domain C4J89_RS07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS07210 PF07690 Major Facilitator Superfamily C4J89_RS07215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS07215 PF03466 LysR substrate binding domain C4J89_RS07220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS07220 PF03466 LysR substrate binding domain C4J89_RS07225 PF07690 Major Facilitator Superfamily C4J89_RS07230 PF13460 NAD(P)H-binding C4J89_RS07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS07240 PF03466 LysR substrate binding domain C4J89_RS07250 PF01494 FAD binding domain C4J89_RS07255 PF07690 Major Facilitator Superfamily C4J89_RS07280 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS07290 PF01612 3'-5' exonuclease C4J89_RS07290 PF00570 HRDC domain C4J89_RS07295 PF05166 YcgL domain C4J89_RS07300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS07305 PF00881 Nitroreductase family C4J89_RS07310 PF03692 Putative zinc- or iron-chelating domain C4J89_RS07330 PF01844 HNH endonuclease C4J89_RS07350 PF00326 Prolyl oligopeptidase family C4J89_RS07350 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C4J89_RS07360 PF13230 Glutamine amidotransferases class-II C4J89_RS07370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS07370 PF03466 LysR substrate binding domain C4J89_RS07375 PF03746 LamB/YcsF family C4J89_RS07380 PF02682 Carboxyltransferase domain, subdomain C and D C4J89_RS07385 PF02626 Carboxyltransferase domain, subdomain A and B C4J89_RS07395 PF17871 AAA lid domain C4J89_RS07395 PF10431 C-terminal, D2-small domain, of ClpB protein C4J89_RS07395 PF07724 AAA domain (Cdc48 subfamily) C4J89_RS07395 PF02861 Clp amino terminal domain, pathogenicity island component C4J89_RS07395 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS07405 PF00291 Pyridoxal-phosphate dependent enzyme C4J89_RS07415 PF00330 Aconitase family (aconitate hydratase) C4J89_RS07415 PF00694 Aconitase C-terminal domain C4J89_RS07420 PF01728 FtsJ-like methyltransferase C4J89_RS07420 PF18125 RlmM ferredoxin-like domain C4J89_RS07425 PF01206 Sulfurtransferase TusA C4J89_RS07430 PF01554 MatE C4J89_RS07435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS07435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J89_RS07435 PF11890 Domain of unknown function (DUF3410) C4J89_RS07440 PF00664 ABC transporter transmembrane region C4J89_RS07440 PF00005 ABC transporter C4J89_RS07445 PF14718 Soluble lytic murein transglycosylase L domain C4J89_RS07445 PF01464 Transglycosylase SLT domain C4J89_RS07450 PF00005 ABC transporter C4J89_RS07450 PF12848 ABC transporter C4J89_RS07450 PF16326 ABC transporter C-terminal domain C4J89_RS07455 PF00582 Universal stress protein family C4J89_RS07465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J89_RS07465 PF00378 Enoyl-CoA hydratase/isomerase C4J89_RS07465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J89_RS07470 PF00108 Thiolase, N-terminal domain C4J89_RS07470 PF02803 Thiolase, C-terminal domain C4J89_RS07480 PF01396 Topoisomerase DNA binding C4 zinc finger C4J89_RS07480 PF08272 Topoisomerase I zinc-ribbon-like C4J89_RS07480 PF01131 DNA topoisomerase C4J89_RS07480 PF01751 Toprim domain C4J89_RS07495 PF03846 Cell division inhibitor SulA C4J89_RS07500 PF01726 LexA DNA binding domain C4J89_RS07500 PF00717 Peptidase S24-like C4J89_RS07505 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS07510 PF00933 Glycosyl hydrolase family 3 N terminal domain C4J89_RS07515 PF00176 SNF2 family N-terminal domain C4J89_RS07515 PF00271 Helicase conserved C-terminal domain C4J89_RS07515 PF12419 SNF2 Helicase protein C4J89_RS07520 PF00176 SNF2 family N-terminal domain C4J89_RS07520 PF00271 Helicase conserved C-terminal domain C4J89_RS07520 PF12419 SNF2 Helicase protein C4J89_RS07530 PF03461 TRCF domain C4J89_RS07530 PF17757 UvrB interaction domain C4J89_RS07530 PF00271 Helicase conserved C-terminal domain C4J89_RS07530 PF00270 DEAD/DEAH box helicase C4J89_RS07530 PF02559 CarD-like/TRCF domain C4J89_RS07535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4J89_RS07535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4J89_RS07545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J89_RS07545 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS07550 PF03009 Glycerophosphoryl diester phosphodiesterase family C4J89_RS07560 PF02687 FtsX-like permease family C4J89_RS07560 PF12704 MacB-like periplasmic core domain C4J89_RS07565 PF00005 ABC transporter C4J89_RS07570 PF12704 MacB-like periplasmic core domain C4J89_RS07570 PF02687 FtsX-like permease family C4J89_RS07575 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS07575 PF00672 HAMP domain C4J89_RS07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS07580 PF00072 Response regulator receiver domain C4J89_RS07580 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS07590 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C4J89_RS07590 PF14489 QueF-like protein C4J89_RS07605 PF04333 MlaA lipoprotein C4J89_RS07620 PF00072 Response regulator receiver domain C4J89_RS07620 PF02954 Bacterial regulatory protein, Fis family C4J89_RS07620 PF00158 Sigma-54 interaction domain C4J89_RS07630 PF00923 Transaldolase/Fructose-6-phosphate aldolase C4J89_RS07635 PF01207 Dihydrouridine synthase (Dus) C4J89_RS07640 PF00589 Phage integrase family C4J89_RS07775 PF02586 SOS response associated peptidase (SRAP) C4J89_RS07835 PF07690 Major Facilitator Superfamily C4J89_RS07840 PF06039 Malate:quinone oxidoreductase (Mqo) C4J89_RS07845 PF03466 LysR substrate binding domain C4J89_RS07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS07850 PF00892 EamA-like transporter family C4J89_RS07870 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C4J89_RS07870 PF03641 Possible lysine decarboxylase C4J89_RS07870 PF11892 Domain of unknown function (DUF3412) C4J89_RS07880 PF12241 Trans-2-enoyl-CoA reductase catalytic region C4J89_RS07880 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C4J89_RS07880 PF07055 Enoyl reductase FAD binding domain C4J89_RS07895 PF03466 LysR substrate binding domain C4J89_RS07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS07900 PF00202 Aminotransferase class-III C4J89_RS07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS07905 PF03466 LysR substrate binding domain C4J89_RS07910 PF07690 Major Facilitator Superfamily C4J89_RS07920 PF00860 Permease family C4J89_RS07925 PF00561 alpha/beta hydrolase fold C4J89_RS07930 PF03472 Autoinducer binding domain C4J89_RS07930 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS07935 PF00561 alpha/beta hydrolase fold C4J89_RS07940 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS07945 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J89_RS07945 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS07950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J89_RS07950 PF00005 ABC transporter C4J89_RS07955 PF00005 ABC transporter C4J89_RS07955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J89_RS07960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J89_RS07965 PF00106 short chain dehydrogenase C4J89_RS07970 PF13419 Haloacid dehalogenase-like hydrolase C4J89_RS07980 PF01979 Amidohydrolase family C4J89_RS07985 PF01008 Initiation factor 2 subunit family C4J89_RS07990 PF00521 DNA gyrase/topoisomerase IV, subunit A C4J89_RS07990 PF03989 DNA gyrase C-terminal domain, beta-propeller C4J89_RS07995 PF00266 Aminotransferase class-V C4J89_RS08000 PF01842 ACT domain C4J89_RS08000 PF01817 Chorismate mutase type II C4J89_RS08000 PF00800 Prephenate dehydratase C4J89_RS08005 PF00155 Aminotransferase class I and II C4J89_RS08010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4J89_RS08015 PF02224 Cytidylate kinase C4J89_RS08020 PF00575 S1 RNA binding domain C4J89_RS08030 PF00216 Bacterial DNA-binding protein C4J89_RS08055 PF00535 Glycosyl transferase family 2 C4J89_RS08060 PF13439 Glycosyltransferase Family 4 C4J89_RS08060 PF00534 Glycosyl transferases group 1 C4J89_RS08065 PF00534 Glycosyl transferases group 1 C4J89_RS08065 PF13439 Glycosyltransferase Family 4 C4J89_RS08070 PF01370 NAD dependent epimerase/dehydratase family C4J89_RS08115 PF03814 Potassium-transporting ATPase A subunit C4J89_RS08125 PF02669 K+-transporting ATPase, c chain C4J89_RS08130 PF13493 Domain of unknown function (DUF4118) C4J89_RS08130 PF02702 Osmosensitive K+ channel His kinase sensor domain C4J89_RS08130 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS08130 PF13492 GAF domain C4J89_RS08130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS08135 PF00072 Response regulator receiver domain C4J89_RS08135 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS08140 PF01734 Patatin-like phospholipase C4J89_RS08170 PF05593 RHS Repeat C4J89_RS08170 PF03527 RHS protein C4J89_RS08175 PF00672 HAMP domain C4J89_RS08175 PF12729 Four helix bundle sensory module for signal transduction C4J89_RS08175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS08180 PF01026 TatD related DNase C4J89_RS08185 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS08185 PF01464 Transglycosylase SLT domain C4J89_RS08210 PF00005 ABC transporter C4J89_RS08220 PF03449 Transcription elongation factor, N-terminal C4J89_RS08220 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J89_RS08230 PF00005 ABC transporter C4J89_RS08235 PF13472 GDSL-like Lipase/Acylhydrolase family C4J89_RS08245 PF03734 L,D-transpeptidase catalytic domain C4J89_RS08245 PF17969 L,D-transpeptidase C-terminal domain C4J89_RS08250 PF11839 Alanine-zipper, major outer membrane lipoprotein C4J89_RS08260 PF00793 DAHP synthetase I family C4J89_RS08275 PF02558 Ketopantoate reductase PanE/ApbA C4J89_RS08275 PF08546 Ketopantoate reductase PanE/ApbA C terminal C4J89_RS08290 PF03466 LysR substrate binding domain C4J89_RS08290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS08295 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J89_RS08295 PF03449 Transcription elongation factor, N-terminal C4J89_RS08310 PF01132 Elongation factor P (EF-P) OB domain C4J89_RS08310 PF08207 Elongation factor P (EF-P) KOW-like domain C4J89_RS08310 PF09285 Elongation factor P, C-terminal C4J89_RS08315 PF07859 alpha/beta hydrolase fold C4J89_RS08320 PF02566 OsmC-like protein C4J89_RS08325 PF01047 MarR family C4J89_RS08330 PF03466 LysR substrate binding domain C4J89_RS08330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS08335 PF01925 Sulfite exporter TauE/SafE C4J89_RS08340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS08340 PF03466 LysR substrate binding domain C4J89_RS08350 PF06224 Winged helix DNA-binding domain C4J89_RS08355 PF01474 Class-II DAHP synthetase family C4J89_RS08365 PF00378 Enoyl-CoA hydratase/isomerase C4J89_RS08375 PF00271 Helicase conserved C-terminal domain C4J89_RS08375 PF00270 DEAD/DEAH box helicase C4J89_RS08375 PF03880 DbpA RNA binding domain C4J89_RS08380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C4J89_RS08385 PF05724 Thiopurine S-methyltransferase (TPMT) C4J89_RS08390 PF01435 Peptidase family M48 C4J89_RS08395 PF00155 Aminotransferase class I and II C4J89_RS08400 PF01641 SelR domain C4J89_RS08405 PF00255 Glutathione peroxidase C4J89_RS08410 PF00072 Response regulator receiver domain C4J89_RS08410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J89_RS08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS08410 PF00672 HAMP domain C4J89_RS08410 PF01627 Hpt domain C4J89_RS08410 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS08420 PF13185 GAF domain C4J89_RS08425 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS08425 PF00072 Response regulator receiver domain C4J89_RS08425 PF01627 Hpt domain C4J89_RS08425 PF00989 PAS fold C4J89_RS08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS08425 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS08430 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS08430 PF00072 Response regulator receiver domain C4J89_RS08440 PF01966 HD domain C4J89_RS08460 PF00909 Ammonium Transporter Family C4J89_RS08475 PF00849 RNA pseudouridylate synthase C4J89_RS08485 PF12804 MobA-like NTP transferase domain C4J89_RS08490 PF00994 Probable molybdopterin binding domain C4J89_RS08495 PF03454 MoeA C-terminal region (domain IV) C4J89_RS08495 PF00994 Probable molybdopterin binding domain C4J89_RS08495 PF03453 MoeA N-terminal region (domain I and II) C4J89_RS08505 PF05532 CsbD-like C4J89_RS08510 PF01312 FlhB HrpN YscU SpaS Family C4J89_RS08520 PF00005 ABC transporter C4J89_RS08525 PF03379 CcmB protein C4J89_RS08530 PF01578 Cytochrome C assembly protein C4J89_RS08535 PF04995 Heme exporter protein D (CcmD) C4J89_RS08540 PF03100 CcmE C4J89_RS08545 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C4J89_RS08545 PF01578 Cytochrome C assembly protein C4J89_RS08550 PF08534 Redoxin C4J89_RS08555 PF03918 Cytochrome C biogenesis protein C4J89_RS08590 PF07690 Major Facilitator Superfamily C4J89_RS08600 PF00027 Cyclic nucleotide-binding domain C4J89_RS08600 PF00520 Ion transport protein C4J89_RS08610 PF02887 Pyruvate kinase, alpha/beta domain C4J89_RS08610 PF00224 Pyruvate kinase, barrel domain C4J89_RS08615 PF05161 MOFRL family C4J89_RS08615 PF13660 Domain of unknown function (DUF4147) C4J89_RS08620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4J89_RS08620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C4J89_RS08625 PF01261 Xylose isomerase-like TIM barrel C4J89_RS08630 PF00205 Thiamine pyrophosphate enzyme, central domain C4J89_RS08630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J89_RS08630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J89_RS08640 PF08362 YcdC-like protein, C-terminal region C4J89_RS08640 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS08645 PF05661 Protein of unknown function (DUF808) C4J89_RS08650 PF04333 MlaA lipoprotein C4J89_RS08670 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J89_RS08675 PF04341 Protein of unknown function, DUF485 C4J89_RS08680 PF00474 Sodium:solute symporter family C4J89_RS08685 PF00285 Citrate synthase, C-terminal domain C4J89_RS08690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C4J89_RS08695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C4J89_RS08700 PF02910 Fumarate reductase flavoprotein C-term C4J89_RS08700 PF00890 FAD binding domain C4J89_RS08705 PF13085 2Fe-2S iron-sulfur cluster binding domain C4J89_RS08710 PF16078 2-oxoglutarate dehydrogenase N-terminus C4J89_RS08710 PF00676 Dehydrogenase E1 component C4J89_RS08710 PF16870 2-oxoglutarate dehydrogenase C-terminal C4J89_RS08710 PF02779 Transketolase, pyrimidine binding domain C4J89_RS08715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4J89_RS08715 PF02817 e3 binding domain C4J89_RS08715 PF00364 Biotin-requiring enzyme C4J89_RS08720 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS08720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J89_RS08725 PF08442 ATP-grasp domain C4J89_RS08725 PF00549 CoA-ligase C4J89_RS08730 PF00549 CoA-ligase C4J89_RS08730 PF02629 CoA binding domain C4J89_RS08735 PF05525 Branched-chain amino acid transport protein C4J89_RS08760 PF00183 Hsp90 protein C4J89_RS08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS08770 PF05726 Pirin C-terminal cupin domain C4J89_RS08770 PF02678 Pirin C4J89_RS08790 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J89_RS08790 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J89_RS08795 PF07977 FabA-like domain C4J89_RS08800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J89_RS08800 PF00072 Response regulator receiver domain C4J89_RS08800 PF01627 Hpt domain C4J89_RS08800 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS08800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS08800 PF00672 HAMP domain C4J89_RS08810 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS08810 PF00593 TonB dependent receptor C4J89_RS08815 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C4J89_RS08815 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C4J89_RS08825 PF00300 Histidine phosphatase superfamily (branch 1) C4J89_RS08830 PF03061 Thioesterase superfamily C4J89_RS08840 PF12697 Alpha/beta hydrolase family C4J89_RS08850 PF01594 AI-2E family transporter C4J89_RS08855 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS08855 PF00672 HAMP domain C4J89_RS08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS08860 PF00072 Response regulator receiver domain C4J89_RS08860 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS08865 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C4J89_RS08870 PF00107 Zinc-binding dehydrogenase C4J89_RS08870 PF16884 N-terminal domain of oxidoreductase C4J89_RS08880 PF00155 Aminotransferase class I and II C4J89_RS08880 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS08885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS08885 PF00672 HAMP domain C4J89_RS08890 PF12146 Serine aminopeptidase, S33 C4J89_RS08920 PF00155 Aminotransferase class I and II C4J89_RS08920 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS08925 PF03473 MOSC domain C4J89_RS08925 PF03476 MOSC N-terminal beta barrel domain C4J89_RS08925 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J89_RS08945 PF01411 tRNA synthetases class II (A) C4J89_RS08945 PF02272 DHHA1 domain C4J89_RS08945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J89_RS08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS08950 PF03466 LysR substrate binding domain C4J89_RS08965 PF09317 Domain of unknown function (DUF1974) C4J89_RS08965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS08965 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS08965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS08975 PF00043 Glutathione S-transferase, C-terminal domain C4J89_RS08975 PF13417 Glutathione S-transferase, N-terminal domain C4J89_RS08980 PF00005 ABC transporter C4J89_RS08985 PF01061 ABC-2 type transporter C4J89_RS09005 PF07690 Major Facilitator Superfamily C4J89_RS09010 PF00893 Small Multidrug Resistance protein C4J89_RS09015 PF01758 Sodium Bile acid symporter family C4J89_RS09020 PF04381 Putative exonuclease, RdgC C4J89_RS09050 PF00682 HMGL-like C4J89_RS09055 PF02515 CoA-transferase family III C4J89_RS09060 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS09065 PF07690 Major Facilitator Superfamily C4J89_RS09085 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J89_RS09085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J89_RS09105 PF00563 EAL domain C4J89_RS09105 PF17153 Periplasmic sensor domain, extracellular C4J89_RS09110 PF00595 PDZ domain C4J89_RS09110 PF17804 Tail specific protease N-terminal domain C4J89_RS09110 PF03572 Peptidase family S41 C4J89_RS09110 PF11818 C-terminal domain of tail specific protease (DUF3340) C4J89_RS09120 PF00005 ABC transporter C4J89_RS09120 PF08402 TOBE domain C4J89_RS09145 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS09145 PF07702 UTRA domain C4J89_RS09155 PF00950 ABC 3 transport family C4J89_RS09160 PF00005 ABC transporter C4J89_RS09190 PF04055 Radical SAM superfamily C4J89_RS09190 PF12544 Lysine-2,3-aminomutase C4J89_RS09195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J89_RS09195 PF18603 L-amino acid ligase C-terminal domain 2 C4J89_RS09215 PF09278 MerR, DNA binding C4J89_RS09215 PF00376 MerR family regulatory protein C4J89_RS09225 PF00158 Sigma-54 interaction domain C4J89_RS09230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS09230 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS09240 PF00266 Aminotransferase class-V C4J89_RS09245 PF00557 Metallopeptidase family M24 C4J89_RS09245 PF01321 Creatinase/Prolidase N-terminal domain C4J89_RS09255 PF00892 EamA-like transporter family C4J89_RS09290 PF03717 Penicillin-binding Protein dimerisation domain C4J89_RS09290 PF00905 Penicillin binding protein transpeptidase domain C4J89_RS09305 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS09305 PF00593 TonB dependent receptor C4J89_RS09310 PF00136 DNA polymerase family B C4J89_RS09310 PF03104 DNA polymerase family B, exonuclease domain C4J89_RS09330 PF03023 Lipid II flippase MurJ C4J89_RS09350 PF01229 Glycosyl hydrolases family 39 C4J89_RS09365 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C4J89_RS09365 PF10531 SLBB domain C4J89_RS09365 PF02563 Polysaccharide biosynthesis/export protein C4J89_RS09370 PF00535 Glycosyl transferase family 2 C4J89_RS09375 PF01050 Mannose-6-phosphate isomerase C4J89_RS09375 PF00483 Nucleotidyl transferase C4J89_RS09380 PF02397 Bacterial sugar transferase C4J89_RS09385 PF01965 DJ-1/PfpI family C4J89_RS09390 PF01965 DJ-1/PfpI family C4J89_RS09390 PF12833 Helix-turn-helix domain C4J89_RS09395 PF00561 alpha/beta hydrolase fold C4J89_RS09400 PF00723 Glycosyl hydrolases family 15 C4J89_RS09425 PF07690 Major Facilitator Superfamily C4J89_RS09430 PF01678 Diaminopimelate epimerase C4J89_RS09435 PF04717 Type VI secretion system, phage-baseplate injector C4J89_RS09450 PF01764 Lipase (class 3) C4J89_RS09455 PF07969 Amidohydrolase family C4J89_RS09460 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J89_RS09465 PF01242 6-pyruvoyl tetrahydropterin synthase C4J89_RS09485 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS09485 PF00072 Response regulator receiver domain C4J89_RS09490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS09495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS09495 PF00672 HAMP domain C4J89_RS09500 PF13726 Na+-H+ antiporter family C4J89_RS09500 PF03553 Na+/H+ antiporter family C4J89_RS09505 PF17200 Single Cache domain 2 C4J89_RS09505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS09505 PF00672 HAMP domain C4J89_RS09510 PF01136 Peptidase family U32 C4J89_RS09510 PF16325 Peptidase family U32 C-terminal domain C4J89_RS09515 PF01594 AI-2E family transporter C4J89_RS09530 PF08501 Shikimate dehydrogenase substrate binding domain C4J89_RS09535 PF04337 Protein of unknown function, DUF480 C4J89_RS09545 PF00375 Sodium:dicarboxylate symporter family C4J89_RS09550 PF03466 LysR substrate binding domain C4J89_RS09550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS09560 PF03741 Integral membrane protein TerC family C4J89_RS09560 PF03471 Transporter associated domain C4J89_RS09565 PF02769 AIR synthase related protein, C-terminal domain C4J89_RS09565 PF00586 AIR synthase related protein, N-terminal domain C4J89_RS09575 PF03773 Predicted permease C4J89_RS09585 PF02798 Glutathione S-transferase, N-terminal domain C4J89_RS09585 PF00043 Glutathione S-transferase, C-terminal domain C4J89_RS09590 PF02567 Phenazine biosynthesis-like protein C4J89_RS09595 PF00490 Delta-aminolevulinic acid dehydratase C4J89_RS09615 PF05593 RHS Repeat C4J89_RS09615 PF03527 RHS protein C4J89_RS09620 PF07759 Protein of unknown function (DUF1615) C4J89_RS09625 PF00108 Thiolase, N-terminal domain C4J89_RS09625 PF02803 Thiolase, C-terminal domain C4J89_RS09630 PF01144 Coenzyme A transferase C4J89_RS09635 PF01144 Coenzyme A transferase C4J89_RS09640 PF03466 LysR substrate binding domain C4J89_RS09640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS09650 PF02146 Sir2 family C4J89_RS09655 PF00571 CBS domain C4J89_RS09660 PF01131 DNA topoisomerase C4J89_RS09660 PF01751 Toprim domain C4J89_RS09665 PF08946 Osmosensory transporter coiled coil C4J89_RS09665 PF00083 Sugar (and other) transporter C4J89_RS09670 PF00732 GMC oxidoreductase C4J89_RS09670 PF05199 GMC oxidoreductase C4J89_RS09680 PF00120 Glutamine synthetase, catalytic domain C4J89_RS09695 PF07690 Major Facilitator Superfamily C4J89_RS09705 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS09705 PF00072 Response regulator receiver domain C4J89_RS09715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J89_RS09715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J89_RS09725 PF00690 Cation transporter/ATPase, N-terminus C4J89_RS09725 PF00689 Cation transporting ATPase, C-terminus C4J89_RS09730 PF02308 MgtC family C4J89_RS09735 PF00072 Response regulator receiver domain C4J89_RS09735 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS09740 PF01627 Hpt domain C4J89_RS09740 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS09740 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS09740 PF00072 Response regulator receiver domain C4J89_RS09740 PF00989 PAS fold C4J89_RS09750 PF00793 DAHP synthetase I family C4J89_RS09755 PF00795 Carbon-nitrogen hydrolase C4J89_RS09770 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS09770 PF00072 Response regulator receiver domain C4J89_RS09775 PF01541 GIY-YIG catalytic domain C4J89_RS09775 PF02151 UvrB/uvrC motif C4J89_RS09775 PF08459 UvrC Helix-hairpin-helix N-terminal C4J89_RS09780 PF01066 CDP-alcohol phosphatidyltransferase C4J89_RS09790 PF13356 Arm DNA-binding domain C4J89_RS09790 PF14659 Phage integrase, N-terminal SAM-like domain C4J89_RS09790 PF00589 Phage integrase family C4J89_RS09825 PF13362 Toprim domain C4J89_RS09825 PF18818 Metallopeptidase superfamily domain C4J89_RS09825 PF08401 Domain of unknown function (DUF1738) C4J89_RS09870 PF01381 Helix-turn-helix C4J89_RS09955 PF03466 LysR substrate binding domain C4J89_RS09955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS09960 PF01979 Amidohydrolase family C4J89_RS09985 PF00561 alpha/beta hydrolase fold C4J89_RS09995 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS10015 PF16363 GDP-mannose 4,6 dehydratase C4J89_RS10025 PF03275 UDP-galactopyranose mutase C4J89_RS10035 PF00005 ABC transporter C4J89_RS10035 PF00664 ABC transporter transmembrane region C4J89_RS10120 PF04002 RadC-like JAB domain C4J89_RS10140 PF01131 DNA topoisomerase C4J89_RS10140 PF01751 Toprim domain C4J89_RS10180 PF13614 AAA domain C4J89_RS10195 PF01292 Prokaryotic cytochrome b561 C4J89_RS10200 PF00171 Aldehyde dehydrogenase family C4J89_RS10205 PF00202 Aminotransferase class-III C4J89_RS10215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS10215 PF00672 HAMP domain C4J89_RS10220 PF07690 Major Facilitator Superfamily C4J89_RS10230 PF00171 Aldehyde dehydrogenase family C4J89_RS10245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J89_RS10245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J89_RS10250 PF00171 Aldehyde dehydrogenase family C4J89_RS10255 PF00106 short chain dehydrogenase C4J89_RS10275 PF01494 FAD binding domain C4J89_RS10280 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4J89_RS10285 PF12833 Helix-turn-helix domain C4J89_RS10305 PF00672 HAMP domain C4J89_RS10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS10305 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS10310 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS10310 PF00072 Response regulator receiver domain C4J89_RS10330 PF01266 FAD dependent oxidoreductase C4J89_RS10335 PF12697 Alpha/beta hydrolase family C4J89_RS10340 PF07690 Major Facilitator Superfamily C4J89_RS10360 PF00005 ABC transporter C4J89_RS10365 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS10370 PF03573 outer membrane porin, OprD family C4J89_RS10380 PF01614 Bacterial transcriptional regulator C4J89_RS10380 PF09339 IclR helix-turn-helix domain C4J89_RS10385 PF04909 Amidohydrolase C4J89_RS10390 PF07690 Major Facilitator Superfamily C4J89_RS10395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J89_RS10395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS10395 PF01842 ACT domain C4J89_RS10400 PF03737 Aldolase/RraA C4J89_RS10405 PF07690 Major Facilitator Superfamily C4J89_RS10425 PF13614 AAA domain C4J89_RS10455 PF12833 Helix-turn-helix domain C4J89_RS10460 PF03958 Bacterial type II/III secretion system short domain C4J89_RS10460 PF00263 Bacterial type II and III secretion system protein C4J89_RS10465 PF07201 HrpJ-like domain C4J89_RS10470 PF00771 FHIPEP family C4J89_RS10480 PF18269 T3SS EscN ATPase C-terminal domain C4J89_RS10480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J89_RS10480 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J89_RS10495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J89_RS10500 PF00813 FliP family C4J89_RS10505 PF01313 Bacterial export proteins, family 3 C4J89_RS10510 PF01311 Bacterial export proteins, family 1 C4J89_RS10515 PF01312 FlhB HrpN YscU SpaS Family C4J89_RS10520 PF07720 Tetratricopeptide repeat C4J89_RS10525 PF04888 Secretion system effector C (SseC) like family C4J89_RS10525 PF16535 Type III cell invasion protein SipB C4J89_RS10545 PF00550 Phosphopantetheine attachment site C4J89_RS10550 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS10555 PF01464 Transglycosylase SLT domain C4J89_RS10560 PF09480 Type III secretion system protein PrgH-EprH (PrgH) C4J89_RS10565 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF C4J89_RS10575 PF01514 Secretory protein of YscJ/FliF family C4J89_RS10595 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS10595 PF00072 Response regulator receiver domain C4J89_RS10605 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS10605 PF00072 Response regulator receiver domain C4J89_RS10610 PF01627 Hpt domain C4J89_RS10610 PF00989 PAS fold C4J89_RS10610 PF00072 Response regulator receiver domain C4J89_RS10610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS10610 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS10610 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS10615 PF00561 alpha/beta hydrolase fold C4J89_RS10630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J89_RS10630 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J89_RS10635 PF13953 PapC C-terminal domain C4J89_RS10635 PF00577 Outer membrane usher protein C4J89_RS10635 PF13954 PapC N-terminal domain C4J89_RS10640 PF00419 Fimbrial protein C4J89_RS10655 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J89_RS10655 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J89_RS10660 PF00577 Outer membrane usher protein C4J89_RS10660 PF13953 PapC C-terminal domain C4J89_RS10660 PF13954 PapC N-terminal domain C4J89_RS10680 PF13520 Amino acid permease C4J89_RS10705 PF00072 Response regulator receiver domain C4J89_RS10705 PF01339 CheB methylesterase C4J89_RS10710 PF03975 CheD chemotactic sensory transduction C4J89_RS10715 PF01739 CheR methyltransferase, SAM binding domain C4J89_RS10715 PF03705 CheR methyltransferase, all-alpha domain C4J89_RS10720 PF01584 CheW-like domain C4J89_RS10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS10730 PF02895 Signal transducing histidine kinase, homodimeric domain C4J89_RS10730 PF01627 Hpt domain C4J89_RS10730 PF01584 CheW-like domain C4J89_RS10730 PF09078 CheY binding C4J89_RS10740 PF00072 Response regulator receiver domain C4J89_RS10745 PF00672 HAMP domain C4J89_RS10745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS10755 PF01494 FAD binding domain C4J89_RS10770 PF07690 Major Facilitator Superfamily C4J89_RS10775 PF00144 Beta-lactamase C4J89_RS10780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS10780 PF03466 LysR substrate binding domain C4J89_RS10790 PF02435 Levansucrase/Invertase C4J89_RS10795 PF03466 LysR substrate binding domain C4J89_RS10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS10820 PF05067 Manganese containing catalase C4J89_RS10825 PF05974 Domain of unknown function (DUF892) C4J89_RS10830 PF00072 Response regulator receiver domain C4J89_RS10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS10830 PF13426 PAS domain C4J89_RS10835 PF01040 UbiA prenyltransferase family C4J89_RS10840 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C4J89_RS10845 PF00510 Cytochrome c oxidase subunit III C4J89_RS10850 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J89_RS10855 PF06481 COX Aromatic Rich Motif C4J89_RS10855 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4J89_RS10870 PF13823 Alcohol dehydrogenase GroES-associated C4J89_RS10870 PF00107 Zinc-binding dehydrogenase C4J89_RS10870 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS10900 PF10685 Stress-induced bacterial acidophilic repeat motif C4J89_RS10905 PF00563 EAL domain C4J89_RS10905 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS10905 PF00360 Phytochrome region C4J89_RS10905 PF01590 GAF domain C4J89_RS10925 PF04239 Protein of unknown function (DUF421) C4J89_RS10930 PF01739 CheR methyltransferase, SAM binding domain C4J89_RS10930 PF01339 CheB methylesterase C4J89_RS10930 PF03705 CheR methyltransferase, all-alpha domain C4J89_RS10930 PF08448 PAS fold C4J89_RS10965 PF02464 Competence-damaged protein C4J89_RS10980 PF00034 Cytochrome c C4J89_RS10980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J89_RS10985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J89_RS10990 PF01799 [2Fe-2S] binding domain C4J89_RS10990 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J89_RS10995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS10995 PF03466 LysR substrate binding domain C4J89_RS11000 PF07690 Major Facilitator Superfamily C4J89_RS11005 PF13378 Enolase C-terminal domain-like C4J89_RS11005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J89_RS11010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS11010 PF03466 LysR substrate binding domain C4J89_RS11015 PF00171 Aldehyde dehydrogenase family C4J89_RS11020 PF03435 Saccharopine dehydrogenase NADP binding domain C4J89_RS11020 PF16653 Saccharopine dehydrogenase C-terminal domain C4J89_RS11025 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4J89_RS11030 PF00356 Bacterial regulatory proteins, lacI family C4J89_RS11040 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS11045 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS11050 PF08402 TOBE domain C4J89_RS11050 PF00005 ABC transporter C4J89_RS11055 PF00149 Calcineurin-like phosphoesterase C4J89_RS11060 PF01717 Cobalamin-independent synthase, Catalytic domain C4J89_RS11060 PF08267 Cobalamin-independent synthase, N-terminal domain C4J89_RS11065 PF03969 AFG1-like ATPase C4J89_RS11070 PF00583 Acetyltransferase (GNAT) family C4J89_RS11080 PF07660 Secretin and TonB N terminus short domain C4J89_RS11080 PF00593 TonB dependent receptor C4J89_RS11080 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS11085 PF00884 Sulfatase C4J89_RS11090 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C4J89_RS11090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4J89_RS11095 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C4J89_RS11095 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C4J89_RS11110 PF02954 Bacterial regulatory protein, Fis family C4J89_RS11110 PF00072 Response regulator receiver domain C4J89_RS11110 PF00158 Sigma-54 interaction domain C4J89_RS11155 PF02615 Malate/L-lactate dehydrogenase C4J89_RS11170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS11170 PF03466 LysR substrate binding domain C4J89_RS11180 PF13302 Acetyltransferase (GNAT) domain C4J89_RS11190 PF00860 Permease family C4J89_RS11195 PF12729 Four helix bundle sensory module for signal transduction C4J89_RS11195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS11195 PF00672 HAMP domain C4J89_RS11200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J89_RS11200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS11205 PF07690 Major Facilitator Superfamily C4J89_RS11210 PF00294 pfkB family carbohydrate kinase C4J89_RS11220 PF00356 Bacterial regulatory proteins, lacI family C4J89_RS11245 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J89_RS11245 PF12833 Helix-turn-helix domain C4J89_RS11255 PF00873 AcrB/AcrD/AcrF family C4J89_RS11260 PF00529 HlyD membrane-fusion protein of T1SS C4J89_RS11260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J89_RS11265 PF00072 Response regulator receiver domain C4J89_RS11265 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS11270 PF00672 HAMP domain C4J89_RS11270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS11270 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS11275 PF08241 Methyltransferase domain C4J89_RS11280 PF01925 Sulfite exporter TauE/SafE C4J89_RS11290 PF00296 Luciferase-like monooxygenase C4J89_RS11295 PF00557 Metallopeptidase family M24 C4J89_RS11310 PF00294 pfkB family carbohydrate kinase C4J89_RS11315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J89_RS11315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J89_RS11320 PF01232 Mannitol dehydrogenase Rossmann domain C4J89_RS11320 PF08125 Mannitol dehydrogenase C-terminal domain C4J89_RS11325 PF00005 ABC transporter C4J89_RS11325 PF17912 MalK OB fold domain C4J89_RS11330 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS11335 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS11365 PF08534 Redoxin C4J89_RS11370 PF13533 Biotin-lipoyl like C4J89_RS11375 PF00873 AcrB/AcrD/AcrF family C4J89_RS11380 PF00873 AcrB/AcrD/AcrF family C4J89_RS11385 PF02321 Outer membrane efflux protein C4J89_RS11390 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS11395 PF00005 ABC transporter C4J89_RS11400 PF13407 Periplasmic binding protein domain C4J89_RS11415 PF12833 Helix-turn-helix domain C4J89_RS11420 PF04966 Carbohydrate-selective porin, OprB family C4J89_RS11425 PF01011 PQQ enzyme repeat C4J89_RS11430 PF00296 Luciferase-like monooxygenase C4J89_RS11435 PF01613 Flavin reductase like domain C4J89_RS11440 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J89_RS11445 PF08402 TOBE domain C4J89_RS11445 PF00005 ABC transporter C4J89_RS11455 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS11460 PF13416 Bacterial extracellular solute-binding protein C4J89_RS11465 PF00925 GTP cyclohydrolase II C4J89_RS11465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C4J89_RS11475 PF07690 Major Facilitator Superfamily C4J89_RS11480 PF00293 NUDIX domain C4J89_RS11480 PF09297 NADH pyrophosphatase zinc ribbon domain C4J89_RS11485 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS11485 PF07729 FCD domain C4J89_RS11490 PF02627 Carboxymuconolactone decarboxylase family C4J89_RS11495 PF01613 Flavin reductase like domain C4J89_RS11500 PF00171 Aldehyde dehydrogenase family C4J89_RS11505 PF12697 Alpha/beta hydrolase family C4J89_RS11515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS11515 PF00672 HAMP domain C4J89_RS11515 PF02743 Cache domain C4J89_RS11520 PF01062 Bestrophin, RFP-TM, chloride channel C4J89_RS11530 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS11530 PF17151 Periplasmic sensor domain C4J89_RS11535 PF01022 Bacterial regulatory protein, arsR family C4J89_RS11540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J89_RS11545 PF00593 TonB dependent receptor C4J89_RS11545 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS11550 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS11555 PF00920 Dehydratase family C4J89_RS11560 PF07690 Major Facilitator Superfamily C4J89_RS11570 PF00171 Aldehyde dehydrogenase family C4J89_RS11580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J89_RS11585 PF00005 ABC transporter C4J89_RS11590 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS11595 PF01263 Aldose 1-epimerase C4J89_RS11605 PF12833 Helix-turn-helix domain C4J89_RS11605 PF12852 Cupin C4J89_RS11610 PF07690 Major Facilitator Superfamily C4J89_RS11615 PF02798 Glutathione S-transferase, N-terminal domain C4J89_RS11620 PF13407 Periplasmic binding protein domain C4J89_RS11630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J89_RS11630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J89_RS11635 PF00158 Sigma-54 interaction domain C4J89_RS11635 PF13426 PAS domain C4J89_RS11635 PF02954 Bacterial regulatory protein, Fis family C4J89_RS11640 PF00356 Bacterial regulatory proteins, lacI family C4J89_RS11655 PF14759 Reductase C-terminal C4J89_RS11655 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS11665 PF02673 Bacitracin resistance protein BacA C4J89_RS11675 PF12833 Helix-turn-helix domain C4J89_RS11675 PF01965 DJ-1/PfpI family C4J89_RS11680 PF16925 Tetracyclin repressor-like, C-terminal domain C4J89_RS11680 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS11690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J89_RS11695 PF00550 Phosphopantetheine attachment site C4J89_RS11695 PF14765 Polyketide synthase dehydratase C4J89_RS11695 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J89_RS11695 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS11695 PF16197 Ketoacyl-synthetase C-terminal extension C4J89_RS11695 PF00107 Zinc-binding dehydrogenase C4J89_RS11695 PF08659 KR domain C4J89_RS11695 PF00698 Acyl transferase domain C4J89_RS11695 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J89_RS11705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS11705 PF03466 LysR substrate binding domain C4J89_RS11715 PF00561 alpha/beta hydrolase fold C4J89_RS11730 PF00107 Zinc-binding dehydrogenase C4J89_RS11730 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS11755 PF00072 Response regulator receiver domain C4J89_RS11755 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS11765 PF00501 AMP-binding enzyme C4J89_RS11765 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS11770 PF00083 Sugar (and other) transporter C4J89_RS11770 PF08946 Osmosensory transporter coiled coil C4J89_RS11780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J89_RS11795 PF00999 Sodium/hydrogen exchanger family C4J89_RS11795 PF02254 TrkA-N domain C4J89_RS11800 PF05973 Phage derived protein Gp49-like (DUF891) C4J89_RS11805 PF13744 Helix-turn-helix domain C4J89_RS11815 PF01566 Natural resistance-associated macrophage protein C4J89_RS11820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS11820 PF03466 LysR substrate binding domain C4J89_RS11845 PF03502 Nucleoside-specific channel-forming protein, Tsx C4J89_RS11850 PF12833 Helix-turn-helix domain C4J89_RS11875 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C4J89_RS11875 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C4J89_RS11880 PF02540 NAD synthase C4J89_RS11890 PF01266 FAD dependent oxidoreductase C4J89_RS11895 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS11895 PF04324 BFD-like [2Fe-2S] binding domain C4J89_RS11905 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS11910 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS11915 PF08402 TOBE domain C4J89_RS11915 PF00005 ABC transporter C4J89_RS11920 PF01614 Bacterial transcriptional regulator C4J89_RS11920 PF09339 IclR helix-turn-helix domain C4J89_RS11930 PF01554 MatE C4J89_RS11950 PF00550 Phosphopantetheine attachment site C4J89_RS11950 PF00668 Condensation domain C4J89_RS11950 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS11950 PF00501 AMP-binding enzyme C4J89_RS11950 PF07993 Male sterility protein C4J89_RS11955 PF00550 Phosphopantetheine attachment site C4J89_RS11955 PF00668 Condensation domain C4J89_RS11955 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS11955 PF00501 AMP-binding enzyme C4J89_RS11960 PF00593 TonB dependent receptor C4J89_RS11960 PF07660 Secretin and TonB N terminus short domain C4J89_RS11960 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS11965 PF00664 ABC transporter transmembrane region C4J89_RS11965 PF00005 ABC transporter C4J89_RS12005 PF01965 DJ-1/PfpI family C4J89_RS12005 PF12833 Helix-turn-helix domain C4J89_RS12015 PF02678 Pirin C4J89_RS12015 PF17954 Quercetinase C-terminal cupin domain C4J89_RS12020 PF01965 DJ-1/PfpI family C4J89_RS12025 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS12030 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS12035 PF12833 Helix-turn-helix domain C4J89_RS12035 PF02311 AraC-like ligand binding domain C4J89_RS12040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS12040 PF03466 LysR substrate binding domain C4J89_RS12050 PF07969 Amidohydrolase family C4J89_RS12055 PF00857 Isochorismatase family C4J89_RS12060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS12060 PF03466 LysR substrate binding domain C4J89_RS12070 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS12070 PF08448 PAS fold C4J89_RS12070 PF08447 PAS fold C4J89_RS12070 PF05231 MASE1 C4J89_RS12070 PF00563 EAL domain C4J89_RS12070 PF13426 PAS domain C4J89_RS12080 PF02333 Phytase C4J89_RS12085 PF01618 MotA/TolQ/ExbB proton channel family C4J89_RS12090 PF02472 Biopolymer transport protein ExbD/TolR C4J89_RS12100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J89_RS12100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS12105 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS12105 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS12105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS12110 PF00296 Luciferase-like monooxygenase C4J89_RS12120 PF00581 Rhodanese-like domain C4J89_RS12125 PF05995 Cysteine dioxygenase type I C4J89_RS12130 PF03466 LysR substrate binding domain C4J89_RS12130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS12135 PF00596 Class II Aldolase and Adducin N-terminal domain C4J89_RS12140 PF00456 Transketolase, thiamine diphosphate binding domain C4J89_RS12140 PF02779 Transketolase, pyrimidine binding domain C4J89_RS12140 PF02780 Transketolase, C-terminal domain C4J89_RS12150 PF01266 FAD dependent oxidoreductase C4J89_RS12175 PF07063 Domain of unknown function (DUF1338) C4J89_RS12195 PF01343 Peptidase family S49 C4J89_RS12195 PF08496 Peptidase family S49 N-terminal C4J89_RS12200 PF02734 DAK2 domain C4J89_RS12205 PF02733 Dak1 domain C4J89_RS12210 PF00107 Zinc-binding dehydrogenase C4J89_RS12210 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS12220 PF13407 Periplasmic binding protein domain C4J89_RS12225 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS12230 PF00005 ABC transporter C4J89_RS12235 PF02502 Ribose/Galactose Isomerase C4J89_RS12240 PF04198 Putative sugar-binding domain C4J89_RS12245 PF00571 CBS domain C4J89_RS12245 PF03471 Transporter associated domain C4J89_RS12245 PF03741 Integral membrane protein TerC family C4J89_RS12265 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS12270 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS12275 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS12280 PF00005 ABC transporter C4J89_RS12300 PF00294 pfkB family carbohydrate kinase C4J89_RS12310 PF13188 PAS domain C4J89_RS12310 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS12310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS12310 PF00072 Response regulator receiver domain C4J89_RS12310 PF08448 PAS fold C4J89_RS12315 PF00501 AMP-binding enzyme C4J89_RS12315 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS12320 PF00106 short chain dehydrogenase C4J89_RS12330 PF00989 PAS fold C4J89_RS12330 PF00158 Sigma-54 interaction domain C4J89_RS12330 PF02954 Bacterial regulatory protein, Fis family C4J89_RS12335 PF00005 ABC transporter C4J89_RS12335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J89_RS12340 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J89_RS12340 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS12345 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS12350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J89_RS12355 PF05698 Bacterial trigger factor protein (TF) C-terminus C4J89_RS12365 PF00248 Aldo/keto reductase family C4J89_RS12370 PF05638 Type VI secretion system effector, Hcp C4J89_RS12385 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath C4J89_RS12395 PF05947 Type VI secretion system, TssF C4J89_RS12405 PF17871 AAA lid domain C4J89_RS12405 PF10431 C-terminal, D2-small domain, of ClpB protein C4J89_RS12405 PF07724 AAA domain (Cdc48 subfamily) C4J89_RS12405 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS12410 PF00072 Response regulator receiver domain C4J89_RS12410 PF02954 Bacterial regulatory protein, Fis family C4J89_RS12410 PF00158 Sigma-54 interaction domain C4J89_RS12430 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE C4J89_RS12440 PF06761 Intracellular multiplication and human macrophage-killing C4J89_RS12440 PF14331 ImcF-related N-terminal domain C4J89_RS12440 PF06744 Type VI secretion protein IcmF C-terminal C4J89_RS12450 PF00069 Protein kinase domain C4J89_RS12465 PF02378 Phosphotransferase system, EIIC C4J89_RS12475 PF00106 short chain dehydrogenase C4J89_RS12480 PF00743 Flavin-binding monooxygenase-like C4J89_RS12485 PF12697 Alpha/beta hydrolase family C4J89_RS12490 PF00487 Fatty acid desaturase C4J89_RS12505 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C4J89_RS12510 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS12510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS12510 PF09317 Domain of unknown function (DUF1974) C4J89_RS12510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS12525 PF00108 Thiolase, N-terminal domain C4J89_RS12525 PF02803 Thiolase, C-terminal domain C4J89_RS12530 PF00501 AMP-binding enzyme C4J89_RS12530 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS12535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J89_RS12535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J89_RS12575 PF10282 Lactonase, 7-bladed beta-propeller C4J89_RS12595 PF12320 Type 5 capsule protein repressor C-terminal domain C4J89_RS12595 PF00149 Calcineurin-like phosphoesterase C4J89_RS12625 PF01882 Protein of unknown function DUF58 C4J89_RS12630 PF17863 AAA lid domain C4J89_RS12630 PF07726 ATPase family associated with various cellular activities (AAA) C4J89_RS12640 PF05088 Bacterial NAD-glutamate dehydrogenase C4J89_RS12645 PF07729 FCD domain C4J89_RS12645 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS12650 PF07729 FCD domain C4J89_RS12650 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS12655 PF00375 Sodium:dicarboxylate symporter family C4J89_RS12660 PF13673 Acetyltransferase (GNAT) domain C4J89_RS12660 PF13302 Acetyltransferase (GNAT) domain C4J89_RS12660 PF03352 Methyladenine glycosylase C4J89_RS12660 PF00117 Glutamine amidotransferase class-I C4J89_RS12660 PF00958 GMP synthase C terminal domain C4J89_RS12670 PF14834 Glutathione S-transferase, C-terminal domain C4J89_RS12670 PF02798 Glutathione S-transferase, N-terminal domain C4J89_RS12690 PF02633 Creatinine amidohydrolase C4J89_RS12705 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS12705 PF00672 HAMP domain C4J89_RS12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS12710 PF00072 Response regulator receiver domain C4J89_RS12710 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS12720 PF01380 SIS domain C4J89_RS12720 PF01418 Helix-turn-helix domain, rpiR family C4J89_RS12730 PF00294 pfkB family carbohydrate kinase C4J89_RS12735 PF01261 Xylose isomerase-like TIM barrel C4J89_RS12740 PF04962 KduI/IolB family C4J89_RS12750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J89_RS12750 PF00205 Thiamine pyrophosphate enzyme, central domain C4J89_RS12750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J89_RS12755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J89_RS12755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J89_RS12760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J89_RS12760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J89_RS12765 PF13407 Periplasmic binding protein domain C4J89_RS12770 PF00005 ABC transporter C4J89_RS12775 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS12780 PF01258 Prokaryotic dksA/traR C4-type zinc finger C4J89_RS12785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS12835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J89_RS12835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J89_RS12840 PF00445 Ribonuclease T2 family C4J89_RS12845 PF01810 LysE type translocator C4J89_RS12850 PF12833 Helix-turn-helix domain C4J89_RS12855 PF00005 ABC transporter C4J89_RS12855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J89_RS12860 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS12860 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J89_RS12865 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS12870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J89_RS12875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J89_RS12880 PF01476 LysM domain C4J89_RS12880 PF01464 Transglycosylase SLT domain C4J89_RS12885 PF16123 Hydroxyacylglutathione hydrolase C-terminus C4J89_RS12885 PF00753 Metallo-beta-lactamase superfamily C4J89_RS12895 PF00075 RNase H C4J89_RS12900 PF00929 Exonuclease C4J89_RS12910 PF00672 HAMP domain C4J89_RS12910 PF17200 Single Cache domain 2 C4J89_RS12910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS12915 PF02673 Bacitracin resistance protein BacA C4J89_RS12930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS12930 PF03466 LysR substrate binding domain C4J89_RS12935 PF02525 Flavodoxin-like fold C4J89_RS12945 PF07690 Major Facilitator Superfamily C4J89_RS12950 PF12848 ABC transporter C4J89_RS12950 PF00005 ABC transporter C4J89_RS12955 PF07690 Major Facilitator Superfamily C4J89_RS12965 PF02706 Chain length determinant protein C4J89_RS12975 PF04679 ATP dependent DNA ligase C terminal region C4J89_RS12975 PF13298 DNA polymerase Ligase (LigD) C4J89_RS12975 PF01068 ATP dependent DNA ligase domain C4J89_RS12980 PF02735 Ku70/Ku80 beta-barrel domain C4J89_RS12990 PF07995 Glucose / Sorbosone dehydrogenase C4J89_RS13005 PF13091 PLD-like domain C4J89_RS13010 PF13473 Cupredoxin-like domain C4J89_RS13010 PF09375 Imelysin C4J89_RS13015 PF04261 Dyp-type peroxidase family C4J89_RS13020 PF09375 Imelysin C4J89_RS13020 PF13473 Cupredoxin-like domain C4J89_RS13025 PF03239 Iron permease FTR1 family C4J89_RS13030 PF12833 Helix-turn-helix domain C4J89_RS13040 PF02321 Outer membrane efflux protein C4J89_RS13045 PF00873 AcrB/AcrD/AcrF family C4J89_RS13050 PF00529 HlyD membrane-fusion protein of T1SS C4J89_RS13050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J89_RS13055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS13055 PF03466 LysR substrate binding domain C4J89_RS13065 PF00072 Response regulator receiver domain C4J89_RS13065 PF00158 Sigma-54 interaction domain C4J89_RS13065 PF02954 Bacterial regulatory protein, Fis family C4J89_RS13070 PF00072 Response regulator receiver domain C4J89_RS13070 PF09308 LuxQ, periplasmic C4J89_RS13070 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS13070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS13075 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS13075 PF00072 Response regulator receiver domain C4J89_RS13080 PF17200 Single Cache domain 2 C4J89_RS13080 PF07730 Histidine kinase C4J89_RS13100 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS13115 PF02321 Outer membrane efflux protein C4J89_RS13120 PF07690 Major Facilitator Superfamily C4J89_RS13125 PF13533 Biotin-lipoyl like C4J89_RS13145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS13155 PF00202 Aminotransferase class-III C4J89_RS13180 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS13185 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J89_RS13185 PF00005 ABC transporter C4J89_RS13195 PF00672 HAMP domain C4J89_RS13195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS13200 PF13407 Periplasmic binding protein domain C4J89_RS13205 PF04237 YjbR C4J89_RS13210 PF12833 Helix-turn-helix domain C4J89_RS13210 PF06719 AraC-type transcriptional regulator N-terminus C4J89_RS13240 PF01638 HxlR-like helix-turn-helix C4J89_RS13245 PF01810 LysE type translocator C4J89_RS13255 PF05191 Adenylate kinase, active site lid C4J89_RS13260 PF03466 LysR substrate binding domain C4J89_RS13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS13265 PF00857 Isochorismatase family C4J89_RS13275 PF00107 Zinc-binding dehydrogenase C4J89_RS13275 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS13285 PF00005 ABC transporter C4J89_RS13285 PF00664 ABC transporter transmembrane region C4J89_RS13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS13300 PF03466 LysR substrate binding domain C4J89_RS13305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J89_RS13315 PF03466 LysR substrate binding domain C4J89_RS13315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS13335 PF00561 alpha/beta hydrolase fold C4J89_RS13340 PF07859 alpha/beta hydrolase fold C4J89_RS13360 PF00005 ABC transporter C4J89_RS13360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J89_RS13365 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS13365 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J89_RS13370 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS13375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J89_RS13380 PF00593 TonB dependent receptor C4J89_RS13380 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS13385 PF00005 ABC transporter C4J89_RS13390 PF13407 Periplasmic binding protein domain C4J89_RS13395 PF00072 Response regulator receiver domain C4J89_RS13395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS13395 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS13395 PF13426 PAS domain C4J89_RS13395 PF08448 PAS fold C4J89_RS13410 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS13410 PF00107 Zinc-binding dehydrogenase C4J89_RS13415 PF07993 Male sterility protein C4J89_RS13415 PF00501 AMP-binding enzyme C4J89_RS13415 PF00550 Phosphopantetheine attachment site C4J89_RS13420 PF00892 EamA-like transporter family C4J89_RS13425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS13425 PF03466 LysR substrate binding domain C4J89_RS13430 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4J89_RS13430 PF00355 Rieske [2Fe-2S] domain C4J89_RS13435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J89_RS13435 PF13378 Enolase C-terminal domain-like C4J89_RS13455 PF07690 Major Facilitator Superfamily C4J89_RS13460 PF00355 Rieske [2Fe-2S] domain C4J89_RS13460 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4J89_RS13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS13470 PF03466 LysR substrate binding domain C4J89_RS13475 PF00005 ABC transporter C4J89_RS13475 PF00571 CBS domain C4J89_RS13480 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS13485 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J89_RS13490 PF12833 Helix-turn-helix domain C4J89_RS13505 PF00701 Dihydrodipicolinate synthetase family C4J89_RS13510 PF00171 Aldehyde dehydrogenase family C4J89_RS13515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS13515 PF03466 LysR substrate binding domain C4J89_RS13520 PF00698 Acyl transferase domain C4J89_RS13520 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS13520 PF00107 Zinc-binding dehydrogenase C4J89_RS13520 PF16197 Ketoacyl-synthetase C-terminal extension C4J89_RS13520 PF08659 KR domain C4J89_RS13520 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J89_RS13520 PF00550 Phosphopantetheine attachment site C4J89_RS13520 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J89_RS13520 PF14765 Polyketide synthase dehydratase C4J89_RS13535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4J89_RS13535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4J89_RS13535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4J89_RS13535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4J89_RS13540 PF17954 Quercetinase C-terminal cupin domain C4J89_RS13540 PF02678 Pirin C4J89_RS13555 PF03576 Peptidase family S58 C4J89_RS13560 PF08548 Peptidase M10 serralysin C terminal C4J89_RS13560 PF00413 Matrixin C4J89_RS13560 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) C4J89_RS13565 PF02974 Protease inhibitor Inh C4J89_RS13570 PF00005 ABC transporter C4J89_RS13570 PF00664 ABC transporter transmembrane region C4J89_RS13575 PF00529 HlyD membrane-fusion protein of T1SS C4J89_RS13580 PF02321 Outer membrane efflux protein C4J89_RS13585 PF00082 Subtilase family C4J89_RS13585 PF03797 Autotransporter beta-domain C4J89_RS13585 PF12951 Passenger-associated-transport-repeat C4J89_RS13590 PF12951 Passenger-associated-transport-repeat C4J89_RS13590 PF03797 Autotransporter beta-domain C4J89_RS13590 PF00082 Subtilase family C4J89_RS13595 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) C4J89_RS13605 PF08774 VRR-NUC domain C4J89_RS13605 PF18081 Fanconi anemia-associated nuclease SAP domain C4J89_RS13610 PF00270 DEAD/DEAH box helicase C4J89_RS13610 PF00271 Helicase conserved C-terminal domain C4J89_RS13615 PF04168 A predicted alpha-helical domain with a conserved ER motif. C4J89_RS13615 PF14403 Circularly permuted ATP-grasp type 2 C4J89_RS13620 PF14403 Circularly permuted ATP-grasp type 2 C4J89_RS13640 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS13640 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS13640 PF00563 EAL domain C4J89_RS13645 PF00072 Response regulator receiver domain C4J89_RS13650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS13650 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS13650 PF00989 PAS fold C4J89_RS13660 PF00005 ABC transporter C4J89_RS13665 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS13670 PF13407 Periplasmic binding protein domain C4J89_RS13675 PF00356 Bacterial regulatory proteins, lacI family C4J89_RS13680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J89_RS13680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J89_RS13685 PF01037 Lrp/AsnC ligand binding domain C4J89_RS13690 PF00892 EamA-like transporter family C4J89_RS13695 PF12392 Collagenase C4J89_RS13695 PF01136 Peptidase family U32 C4J89_RS13700 PF01042 Endoribonuclease L-PSP C4J89_RS13715 PF00296 Luciferase-like monooxygenase C4J89_RS13730 PF02223 Thymidylate kinase C4J89_RS13735 PF17991 Thioredoxin like C-terminal domain C4J89_RS13735 PF00578 AhpC/TSA family C4J89_RS13735 PF02683 Cytochrome C biogenesis protein transmembrane region C4J89_RS13740 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS13740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS13740 PF00672 HAMP domain C4J89_RS13745 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS13745 PF00072 Response regulator receiver domain C4J89_RS13750 PF06441 Epoxide hydrolase N terminus C4J89_RS13755 PF00561 alpha/beta hydrolase fold C4J89_RS13770 PF00171 Aldehyde dehydrogenase family C4J89_RS13775 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C4J89_RS13775 PF01243 Pyridoxamine 5'-phosphate oxidase C4J89_RS13780 PF02567 Phenazine biosynthesis-like protein C4J89_RS13785 PF00425 chorismate binding enzyme C4J89_RS13785 PF00117 Glutamine amidotransferase class-I C4J89_RS13790 PF00857 Isochorismatase family C4J89_RS13795 PF01474 Class-II DAHP synthetase family C4J89_RS13800 PF03284 Phenazine biosynthesis protein A/B C4J89_RS13805 PF03284 Phenazine biosynthesis protein A/B C4J89_RS13810 PF03472 Autoinducer binding domain C4J89_RS13810 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS13815 PF00765 Autoinducer synthase C4J89_RS13820 PF07536 HWE histidine kinase C4J89_RS13820 PF08447 PAS fold C4J89_RS13820 PF13426 PAS domain C4J89_RS13830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS13830 PF08447 PAS fold C4J89_RS13830 PF13426 PAS domain C4J89_RS13860 PF00117 Glutamine amidotransferase class-I C4J89_RS13865 PF04715 Anthranilate synthase component I, N terminal region C4J89_RS13865 PF00425 chorismate binding enzyme C4J89_RS13885 PF01791 DeoC/LacD family aldolase C4J89_RS13890 PF08220 DeoR-like helix-turn-helix domain C4J89_RS13890 PF00455 DeoR C terminal sensor domain C4J89_RS13900 PF07690 Major Facilitator Superfamily C4J89_RS13905 PF00294 pfkB family carbohydrate kinase C4J89_RS13910 PF00672 HAMP domain C4J89_RS13910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS13915 PF07690 Major Facilitator Superfamily C4J89_RS13920 PF02899 Phage integrase, N-terminal SAM-like domain C4J89_RS13920 PF00589 Phage integrase family C4J89_RS13930 PF00535 Glycosyl transferase family 2 C4J89_RS13935 PF02911 Formyl transferase, C-terminal domain C4J89_RS13935 PF01370 NAD dependent epimerase/dehydratase family C4J89_RS13935 PF00551 Formyl transferase C4J89_RS13940 PF01522 Polysaccharide deacetylase C4J89_RS13945 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C4J89_RS13950 PF00892 EamA-like transporter family C4J89_RS13955 PF00893 Small Multidrug Resistance protein C4J89_RS13960 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4J89_RS13960 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4J89_RS13960 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4J89_RS13980 PF00378 Enoyl-CoA hydratase/isomerase C4J89_RS13985 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS13985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS13985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS13990 PF00378 Enoyl-CoA hydratase/isomerase C4J89_RS13995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS13995 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS13995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS14000 PF00108 Thiolase, N-terminal domain C4J89_RS14000 PF02803 Thiolase, C-terminal domain C4J89_RS14005 PF00106 short chain dehydrogenase C4J89_RS14010 PF00501 AMP-binding enzyme C4J89_RS14010 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS14020 PF06745 KaiC C4J89_RS14025 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS14025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS14025 PF00072 Response regulator receiver domain C4J89_RS14025 PF08448 PAS fold C4J89_RS14025 PF13188 PAS domain C4J89_RS14035 PF00672 HAMP domain C4J89_RS14035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS14035 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J89_RS14035 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS14035 PF01627 Hpt domain C4J89_RS14035 PF00072 Response regulator receiver domain C4J89_RS14040 PF01339 CheB methylesterase C4J89_RS14045 PF03705 CheR methyltransferase, all-alpha domain C4J89_RS14045 PF01739 CheR methyltransferase, SAM binding domain C4J89_RS14050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS14050 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS14050 PF00072 Response regulator receiver domain C4J89_RS14050 PF01627 Hpt domain C4J89_RS14055 PF08448 PAS fold C4J89_RS14055 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS14055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS14055 PF00072 Response regulator receiver domain C4J89_RS14055 PF13188 PAS domain C4J89_RS14065 PF11769 Protein of unknown function (DUF3313) C4J89_RS14075 PF01177 Asp/Glu/Hydantoin racemase C4J89_RS14080 PF00583 Acetyltransferase (GNAT) family C4J89_RS14090 PF02595 Glycerate kinase family C4J89_RS14095 PF17853 GGDEF-like domain C4J89_RS14095 PF13556 PucR C-terminal helix-turn-helix domain C4J89_RS14095 PF05651 Putative sugar diacid recognition C4J89_RS14100 PF07690 Major Facilitator Superfamily C4J89_RS14105 PF00248 Aldo/keto reductase family C4J89_RS14110 PF00892 EamA-like transporter family C4J89_RS14115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J89_RS14125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS14125 PF03466 LysR substrate binding domain C4J89_RS14130 PF12792 CSS motif domain associated with EAL C4J89_RS14130 PF00563 EAL domain C4J89_RS14145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J89_RS14150 PF13192 Thioredoxin domain C4J89_RS14150 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS14155 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4J89_RS14155 PF00578 AhpC/TSA family C4J89_RS14170 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS14170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J89_RS14175 PF00483 Nucleotidyl transferase C4J89_RS14195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J89_RS14200 PF00034 Cytochrome c C4J89_RS14215 PF13532 2OG-Fe(II) oxygenase superfamily C4J89_RS14220 PF03060 Nitronate monooxygenase C4J89_RS14230 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS14235 PF03459 TOBE domain C4J89_RS14235 PF00005 ABC transporter C4J89_RS14245 PF00005 ABC transporter C4J89_RS14245 PF12848 ABC transporter C4J89_RS14250 PF06912 Protein of unknown function (DUF1275) C4J89_RS14265 PF03591 AzlC protein C4J89_RS14280 PF02040 Arsenical pump membrane protein C4J89_RS14285 PF01810 LysE type translocator C4J89_RS14330 PF00011 Hsp20/alpha crystallin family C4J89_RS14350 PF13520 Amino acid permease C4J89_RS14355 PF05544 Proline racemase C4J89_RS14360 PF00701 Dihydrodipicolinate synthetase family C4J89_RS14370 PF00171 Aldehyde dehydrogenase family C4J89_RS14375 PF01266 FAD dependent oxidoreductase C4J89_RS14380 PF03747 ADP-ribosylglycohydrolase C4J89_RS14385 PF01965 DJ-1/PfpI family C4J89_RS14385 PF12833 Helix-turn-helix domain C4J89_RS14390 PF01810 LysE type translocator C4J89_RS14405 PF03167 Uracil DNA glycosylase superfamily C4J89_RS14420 PF01804 Penicillin amidase C4J89_RS14435 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS14445 PF00005 ABC transporter C4J89_RS14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS14465 PF03466 LysR substrate binding domain C4J89_RS14470 PF00248 Aldo/keto reductase family C4J89_RS14475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS14475 PF00672 HAMP domain C4J89_RS14475 PF12729 Four helix bundle sensory module for signal transduction C4J89_RS14485 PF00561 alpha/beta hydrolase fold C4J89_RS14490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J89_RS14490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS14490 PF01842 ACT domain C4J89_RS14495 PF08323 Starch synthase catalytic domain C4J89_RS14495 PF00534 Glycosyl transferases group 1 C4J89_RS14500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4J89_RS14500 PF00128 Alpha amylase, catalytic domain C4J89_RS14500 PF11941 Domain of unknown function (DUF3459) C4J89_RS14505 PF02446 4-alpha-glucanotransferase C4J89_RS14510 PF00128 Alpha amylase, catalytic domain C4J89_RS14520 PF00128 Alpha amylase, catalytic domain C4J89_RS14520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4J89_RS14550 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS14550 PF00593 TonB dependent receptor C4J89_RS14555 PF00672 HAMP domain C4J89_RS14555 PF17200 Single Cache domain 2 C4J89_RS14555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS14565 PF00989 PAS fold C4J89_RS14565 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS14565 PF18698 Histidine kinase sensor domain C4J89_RS14565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS14565 PF00672 HAMP domain C4J89_RS14625 PF07690 Major Facilitator Superfamily C4J89_RS14635 PF00291 Pyridoxal-phosphate dependent enzyme C4J89_RS14635 PF00571 CBS domain C4J89_RS14640 PF01053 Cys/Met metabolism PLP-dependent enzyme C4J89_RS14645 PF18381 YcaO cyclodehydratase C-terminal domain C4J89_RS14645 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C4J89_RS14650 PF13091 PLD-like domain C4J89_RS14650 PF13087 AAA domain C4J89_RS14675 PF07995 Glucose / Sorbosone dehydrogenase C4J89_RS14680 PF07690 Major Facilitator Superfamily C4J89_RS14685 PF00958 GMP synthase C terminal domain C4J89_RS14685 PF00117 Glutamine amidotransferase class-I C4J89_RS14685 PF03352 Methyladenine glycosylase C4J89_RS14685 PF13302 Acetyltransferase (GNAT) domain C4J89_RS14685 PF13673 Acetyltransferase (GNAT) domain C4J89_RS14690 PF08946 Osmosensory transporter coiled coil C4J89_RS14690 PF00083 Sugar (and other) transporter C4J89_RS14700 PF06719 AraC-type transcriptional regulator N-terminus C4J89_RS14700 PF12833 Helix-turn-helix domain C4J89_RS14705 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C4J89_RS14710 PF07690 Major Facilitator Superfamily C4J89_RS14715 PF12833 Helix-turn-helix domain C4J89_RS14715 PF02311 AraC-like ligand binding domain C4J89_RS14720 PF07690 Major Facilitator Superfamily C4J89_RS14730 PF01425 Amidase C4J89_RS14740 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS14740 PF00155 Aminotransferase class I and II C4J89_RS14745 PF00892 EamA-like transporter family C4J89_RS14750 PF01738 Dienelactone hydrolase family C4J89_RS14760 PF00144 Beta-lactamase C4J89_RS14765 PF00144 Beta-lactamase C4J89_RS14770 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS14770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS14770 PF00672 HAMP domain C4J89_RS14775 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS14775 PF00072 Response regulator receiver domain C4J89_RS14785 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C4J89_RS14790 PF00582 Universal stress protein family C4J89_RS14800 PF06434 Aconitate hydratase 2 N-terminus C4J89_RS14800 PF00330 Aconitase family (aconitate hydratase) C4J89_RS14800 PF11791 Aconitate B N-terminal domain C4J89_RS14810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J89_RS14810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS14825 PF00155 Aminotransferase class I and II C4J89_RS14825 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS14835 PF11940 Domain of unknown function (DUF3458) Ig-like fold C4J89_RS14835 PF01433 Peptidase family M1 domain C4J89_RS14835 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C4J89_RS14845 PF07023 Protein of unknown function (DUF1315) C4J89_RS14850 PF01694 Rhomboid family C4J89_RS14850 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C4J89_RS14855 PF00149 Calcineurin-like phosphoesterase C4J89_RS14860 PF01513 ATP-NAD kinase C4J89_RS14875 PF13519 von Willebrand factor type A domain C4J89_RS14875 PF07728 AAA domain (dynein-related subfamily) C4J89_RS14875 PF17863 AAA lid domain C4J89_RS14880 PF02514 CobN/Magnesium Chelatase C4J89_RS14885 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J89_RS14885 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J89_RS14900 PF01890 Cobalamin synthesis G C-terminus C4J89_RS14905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J89_RS14910 PF01521 Iron-sulphur cluster biosynthesis C4J89_RS14910 PF01106 NifU-like domain C4J89_RS14915 PF01757 Acyltransferase family C4J89_RS14920 PF02310 B12 binding domain C4J89_RS14920 PF02574 Homocysteine S-methyltransferase C4J89_RS14920 PF02965 Vitamin B12 dependent methionine synthase, activation domain C4J89_RS14920 PF00809 Pterin binding enzyme C4J89_RS14920 PF02607 B12 binding domain C4J89_RS14935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4J89_RS14935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4J89_RS14950 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS14950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J89_RS14955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J89_RS14955 PF00205 Thiamine pyrophosphate enzyme, central domain C4J89_RS14955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J89_RS14960 PF03358 NADPH-dependent FMN reductase C4J89_RS14980 PF00583 Acetyltransferase (GNAT) family C4J89_RS14985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C4J89_RS14985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C4J89_RS14985 PF01276 Orn/Lys/Arg decarboxylase, major domain C4J89_RS15000 PF03372 Endonuclease/Exonuclease/phosphatase family C4J89_RS15010 PF01053 Cys/Met metabolism PLP-dependent enzyme C4J89_RS15020 PF00005 ABC transporter C4J89_RS15030 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS15035 PF00155 Aminotransferase class I and II C4J89_RS15040 PF01565 FAD binding domain C4J89_RS15040 PF02913 FAD linked oxidases, C-terminal domain C4J89_RS15055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS15055 PF03466 LysR substrate binding domain C4J89_RS15060 PF00155 Aminotransferase class I and II C4J89_RS15070 PF03459 TOBE domain C4J89_RS15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS15080 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS15085 PF00005 ABC transporter C4J89_RS15090 PF00268 Ribonucleotide reductase, small chain C4J89_RS15105 PF01066 CDP-alcohol phosphatidyltransferase C4J89_RS15110 PF01925 Sulfite exporter TauE/SafE C4J89_RS15115 PF00293 NUDIX domain C4J89_RS15115 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C4J89_RS15115 PF09297 NADH pyrophosphatase zinc ribbon domain C4J89_RS15120 PF00378 Enoyl-CoA hydratase/isomerase C4J89_RS15125 PF02810 SEC-C motif C4J89_RS15125 PF03695 Uncharacterised protein family (UPF0149) C4J89_RS15130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4J89_RS15140 PF02525 Flavodoxin-like fold C4J89_RS15160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS15160 PF13426 PAS domain C4J89_RS15160 PF00072 Response regulator receiver domain C4J89_RS15165 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS15165 PF17151 Periplasmic sensor domain C4J89_RS15170 PF02806 Alpha amylase, C-terminal all-beta domain C4J89_RS15170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4J89_RS15170 PF00128 Alpha amylase, catalytic domain C4J89_RS15175 PF16657 Maltogenic Amylase, C-terminal domain C4J89_RS15175 PF00128 Alpha amylase, catalytic domain C4J89_RS15180 PF00128 Alpha amylase, catalytic domain C4J89_RS15180 PF11896 Domain of unknown function (DUF3416) C4J89_RS15185 PF02308 MgtC family C4J89_RS15195 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS15195 PF00155 Aminotransferase class I and II C4J89_RS15205 PF04960 Glutaminase C4J89_RS15215 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS15215 PF00550 Phosphopantetheine attachment site C4J89_RS15215 PF07993 Male sterility protein C4J89_RS15215 PF00668 Condensation domain C4J89_RS15215 PF00501 AMP-binding enzyme C4J89_RS15220 PF00296 Luciferase-like monooxygenase C4J89_RS15225 PF17755 UvrA DNA-binding domain C4J89_RS15230 PF13426 PAS domain C4J89_RS15230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS15230 PF00072 Response regulator receiver domain C4J89_RS15235 PF07733 Bacterial DNA polymerase III alpha NTPase domain C4J89_RS15235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C4J89_RS15235 PF14579 Helix-hairpin-helix motif C4J89_RS15235 PF02811 PHP domain C4J89_RS15235 PF01336 OB-fold nucleic acid binding domain C4J89_RS15245 PF03846 Cell division inhibitor SulA C4J89_RS15250 PF01726 LexA DNA binding domain C4J89_RS15250 PF00717 Peptidase S24-like C4J89_RS15260 PF00293 NUDIX domain C4J89_RS15265 PF12146 Serine aminopeptidase, S33 C4J89_RS15270 PF01070 FMN-dependent dehydrogenase C4J89_RS15295 PF01965 DJ-1/PfpI family C4J89_RS15310 PF02630 SCO1/SenC C4J89_RS15335 PF01042 Endoribonuclease L-PSP C4J89_RS15345 PF07687 Peptidase dimerisation domain C4J89_RS15345 PF01546 Peptidase family M20/M25/M40 C4J89_RS15350 PF03466 LysR substrate binding domain C4J89_RS15350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS15355 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J89_RS15370 PF04536 TPM domain C4J89_RS15375 PF12697 Alpha/beta hydrolase family C4J89_RS15380 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS15380 PF08446 PAS fold C4J89_RS15380 PF00360 Phytochrome region C4J89_RS15380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS15380 PF01590 GAF domain C4J89_RS15385 PF01678 Diaminopimelate epimerase C4J89_RS15390 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS15390 PF02190 ATP-dependent protease La (LON) substrate-binding domain C4J89_RS15390 PF05362 Lon protease (S16) C-terminal proteolytic domain C4J89_RS15400 PF00106 short chain dehydrogenase C4J89_RS15405 PF00248 Aldo/keto reductase family C4J89_RS15410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS15410 PF03466 LysR substrate binding domain C4J89_RS15420 PF02627 Carboxymuconolactone decarboxylase family C4J89_RS15430 PF05726 Pirin C-terminal cupin domain C4J89_RS15430 PF02678 Pirin C4J89_RS15435 PF07690 Major Facilitator Superfamily C4J89_RS15440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J89_RS15445 PF00873 AcrB/AcrD/AcrF family C4J89_RS15450 PF03527 RHS protein C4J89_RS15450 PF05593 RHS Repeat C4J89_RS15485 PF01546 Peptidase family M20/M25/M40 C4J89_RS15485 PF07687 Peptidase dimerisation domain C4J89_RS15490 PF05230 MASE2 domain C4J89_RS15490 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS15495 PF01810 LysE type translocator C4J89_RS15505 PF00301 Rubredoxin C4J89_RS15510 PF07840 FadR C-terminal domain C4J89_RS15510 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS15515 PF01037 Lrp/AsnC ligand binding domain C4J89_RS15520 PF01053 Cys/Met metabolism PLP-dependent enzyme C4J89_RS15525 PF00230 Major intrinsic protein C4J89_RS15530 PF07690 Major Facilitator Superfamily C4J89_RS15535 PF13593 SBF-like CPA transporter family (DUF4137) C4J89_RS15540 PF12833 Helix-turn-helix domain C4J89_RS15540 PF02311 AraC-like ligand binding domain C4J89_RS15550 PF00107 Zinc-binding dehydrogenase C4J89_RS15550 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS15550 PF13823 Alcohol dehydrogenase GroES-associated C4J89_RS15555 PF04107 Glutamate-cysteine ligase family 2(GCS2) C4J89_RS15560 PF05175 Methyltransferase small domain C4J89_RS15560 PF01300 Telomere recombination C4J89_RS15580 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS15585 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS15590 PF08402 TOBE domain C4J89_RS15590 PF00005 ABC transporter C4J89_RS15595 PF17912 MalK OB fold domain C4J89_RS15595 PF00005 ABC transporter C4J89_RS15600 PF01590 GAF domain C4J89_RS15600 PF00158 Sigma-54 interaction domain C4J89_RS15600 PF02954 Bacterial regulatory protein, Fis family C4J89_RS15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS15635 PF03466 LysR substrate binding domain C4J89_RS15640 PF02525 Flavodoxin-like fold C4J89_RS15665 PF01027 Inhibitor of apoptosis-promoting Bax1 C4J89_RS15670 PF01565 FAD binding domain C4J89_RS15670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C4J89_RS15675 PF01451 Low molecular weight phosphotyrosine protein phosphatase C4J89_RS15680 PF02348 Cytidylyltransferase C4J89_RS15685 PF03966 Trm112p-like protein C4J89_RS15690 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C4J89_RS15695 PF02472 Biopolymer transport protein ExbD/TolR C4J89_RS15700 PF01618 MotA/TolQ/ExbB proton channel family C4J89_RS15705 PF03772 Competence protein C4J89_RS15705 PF00753 Metallo-beta-lactamase superfamily C4J89_RS15715 PF00672 HAMP domain C4J89_RS15715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS15715 PF16750 Sensor domain of 2-component histidine kinase C4J89_RS15715 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS15720 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS15720 PF00072 Response regulator receiver domain C4J89_RS15725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J89_RS15725 PF00672 HAMP domain C4J89_RS15725 PF01627 Hpt domain C4J89_RS15725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS15725 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS15725 PF00072 Response regulator receiver domain C4J89_RS15730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J89_RS15730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS15745 PF00085 Thioredoxin C4J89_RS15750 PF03960 ArsC family C4J89_RS15755 PF03358 NADPH-dependent FMN reductase C4J89_RS15765 PF03352 Methyladenine glycosylase C4J89_RS15770 PF01171 PP-loop family C4J89_RS15775 PF04893 Yip1 domain C4J89_RS15780 PF10263 SprT-like family C4J89_RS15780 PF17283 SprT-like zinc ribbon domain C4J89_RS15785 PF02515 CoA-transferase family III C4J89_RS15790 PF02635 DsrE/DsrF-like family C4J89_RS15795 PF02635 DsrE/DsrF-like family C4J89_RS15805 PF04358 DsrC like protein C4J89_RS15810 PF00591 Glycosyl transferase family, a/b domain C4J89_RS15810 PF02885 Glycosyl transferase family, helical bundle domain C4J89_RS15815 PF13409 Glutathione S-transferase, N-terminal domain C4J89_RS15820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J89_RS15820 PF10414 Sirohaem synthase dimerisation region C4J89_RS15820 PF14824 Sirohaem biosynthesis protein central C4J89_RS15825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4J89_RS15825 PF02403 Seryl-tRNA synthetase N-terminal domain C4J89_RS15830 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C4J89_RS15835 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS15835 PF12002 MgsA AAA+ ATPase C terminal C4J89_RS15835 PF16193 AAA C-terminal domain C4J89_RS15840 PF03548 Outer membrane lipoprotein carrier protein LolA C4J89_RS15845 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C4J89_RS15845 PF09397 Ftsk gamma domain C4J89_RS15845 PF01580 FtsK/SpoIIIE family C4J89_RS15845 PF17854 FtsK alpha domain C4J89_RS15850 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C4J89_RS15855 PF04377 Arginine-tRNA-protein transferase, C terminus C4J89_RS15855 PF04376 Arginine-tRNA-protein transferase, N terminus C4J89_RS15860 PF01176 Translation initiation factor 1A / IF-1 C4J89_RS15865 PF17871 AAA lid domain C4J89_RS15865 PF07724 AAA domain (Cdc48 subfamily) C4J89_RS15865 PF10431 C-terminal, D2-small domain, of ClpB protein C4J89_RS15865 PF02861 Clp amino terminal domain, pathogenicity island component C4J89_RS15865 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS15870 PF02617 ATP-dependent Clp protease adaptor protein ClpS C4J89_RS15875 PF00313 'Cold-shock' DNA-binding domain C4J89_RS15880 PF00180 Isocitrate/isopropylmalate dehydrogenase C4J89_RS15885 PF03971 Monomeric isocitrate dehydrogenase C4J89_RS15890 PF03466 LysR substrate binding domain C4J89_RS15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS15900 PF01144 Coenzyme A transferase C4J89_RS15910 PF00892 EamA-like transporter family C4J89_RS15915 PF00293 NUDIX domain C4J89_RS15925 PF04356 Protein of unknown function (DUF489) C4J89_RS15930 PF00206 Lyase C4J89_RS15930 PF08328 Adenylosuccinate lyase C-terminal C4J89_RS15935 PF08007 Cupin superfamily protein C4J89_RS15940 PF13673 Acetyltransferase (GNAT) domain C4J89_RS15950 PF00463 Isocitrate lyase family C4J89_RS15960 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C4J89_RS15965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C4J89_RS15970 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C4J89_RS15970 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C4J89_RS15980 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C4J89_RS15980 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C4J89_RS15985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C4J89_RS15985 PF00384 Molybdopterin oxidoreductase C4J89_RS15985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4J89_RS15990 PF00146 NADH dehydrogenase C4J89_RS15995 PF12838 4Fe-4S dicluster domain C4J89_RS16000 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C4J89_RS16005 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C4J89_RS16010 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4J89_RS16010 PF00361 Proton-conducting membrane transporter C4J89_RS16015 PF00361 Proton-conducting membrane transporter C4J89_RS16020 PF00361 Proton-conducting membrane transporter C4J89_RS16025 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA C4J89_RS16055 PF07690 Major Facilitator Superfamily C4J89_RS16065 PF00171 Aldehyde dehydrogenase family C4J89_RS16080 PF00005 ABC transporter C4J89_RS16080 PF12704 MacB-like periplasmic core domain C4J89_RS16080 PF02687 FtsX-like permease family C4J89_RS16085 PF00005 ABC transporter C4J89_RS16085 PF12704 MacB-like periplasmic core domain C4J89_RS16085 PF02687 FtsX-like permease family C4J89_RS16095 PF13533 Biotin-lipoyl like C4J89_RS16105 PF00005 ABC transporter C4J89_RS16125 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J89_RS16125 PF00005 ABC transporter C4J89_RS16135 PF00296 Luciferase-like monooxygenase C4J89_RS16145 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS16145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS16145 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS16160 PF13244 Domain of unknown function (DUF4040) C4J89_RS16160 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C4J89_RS16160 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4J89_RS16160 PF00361 Proton-conducting membrane transporter C4J89_RS16165 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C4J89_RS16170 PF00361 Proton-conducting membrane transporter C4J89_RS16180 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C4J89_RS16185 PF03334 Na+/H+ antiporter subunit C4J89_RS16190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS16210 PF01406 tRNA synthetases class I (C) catalytic domain C4J89_RS16210 PF09190 DALR domain C4J89_RS16215 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4J89_RS16215 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C4J89_RS16220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C4J89_RS16225 PF00149 Calcineurin-like phosphoesterase C4J89_RS16230 PF07690 Major Facilitator Superfamily C4J89_RS16235 PF00529 HlyD membrane-fusion protein of T1SS C4J89_RS16235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J89_RS16240 PF02321 Outer membrane efflux protein C4J89_RS16245 PF01047 MarR family C4J89_RS16250 PF04357 TamB, inner membrane protein subunit of TAM complex C4J89_RS16255 PF01103 Surface antigen C4J89_RS16255 PF07244 Surface antigen variable number repeat C4J89_RS16255 PF17243 POTRA domain TamA domain 1 C4J89_RS16265 PF03372 Endonuclease/Exonuclease/phosphatase family C4J89_RS16270 PF12849 PBP superfamily domain C4J89_RS16275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS16275 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS16275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS16280 PF03466 LysR substrate binding domain C4J89_RS16285 PF13411 MerR HTH family regulatory protein C4J89_RS16290 PF00682 HMGL-like C4J89_RS16295 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS16295 PF00501 AMP-binding enzyme C4J89_RS16300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS16300 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS16300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS16305 PF01039 Carboxyl transferase domain C4J89_RS16315 PF00289 Biotin carboxylase, N-terminal domain C4J89_RS16315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J89_RS16315 PF00364 Biotin-requiring enzyme C4J89_RS16315 PF02785 Biotin carboxylase C-terminal domain C4J89_RS16330 PF00246 Zinc carboxypeptidase C4J89_RS16330 PF18027 Cytosolic carboxypeptidase N-terminal domain C4J89_RS16335 PF01292 Prokaryotic cytochrome b561 C4J89_RS16350 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS16350 PF00668 Condensation domain C4J89_RS16350 PF00550 Phosphopantetheine attachment site C4J89_RS16350 PF00975 Thioesterase domain C4J89_RS16350 PF00501 AMP-binding enzyme C4J89_RS16355 PF04542 Sigma-70 region 2 C4J89_RS16355 PF08281 Sigma-70, region 4 C4J89_RS16365 PF03969 AFG1-like ATPase C4J89_RS16375 PF01709 Transcriptional regulator C4J89_RS16380 PF03466 LysR substrate binding domain C4J89_RS16380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS16385 PF00266 Aminotransferase class-V C4J89_RS16395 PF01292 Prokaryotic cytochrome b561 C4J89_RS16405 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS16405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J89_RS16410 PF00795 Carbon-nitrogen hydrolase C4J89_RS16415 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J89_RS16415 PF12833 Helix-turn-helix domain C4J89_RS16420 PF17831 Pyruvate dehydrogenase E1 component middle domain C4J89_RS16420 PF00456 Transketolase, thiamine diphosphate binding domain C4J89_RS16425 PF01047 MarR family C4J89_RS16430 PF00456 Transketolase, thiamine diphosphate binding domain C4J89_RS16430 PF17831 Pyruvate dehydrogenase E1 component middle domain C4J89_RS16440 PF06965 Na+/H+ antiporter 1 C4J89_RS16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS16445 PF03466 LysR substrate binding domain C4J89_RS16460 PF05698 Bacterial trigger factor protein (TF) C-terminus C4J89_RS16465 PF00216 Bacterial DNA-binding protein C4J89_RS16470 PF05362 Lon protease (S16) C-terminal proteolytic domain C4J89_RS16470 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS16470 PF02190 ATP-dependent protease La (LON) substrate-binding domain C4J89_RS16475 PF07724 AAA domain (Cdc48 subfamily) C4J89_RS16475 PF10431 C-terminal, D2-small domain, of ClpB protein C4J89_RS16475 PF06689 ClpX C4-type zinc finger C4J89_RS16480 PF00574 Clp protease C4J89_RS16485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J89_RS16485 PF05698 Bacterial trigger factor protein (TF) C-terminus C4J89_RS16485 PF05697 Bacterial trigger factor protein (TF) C4J89_RS16510 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C4J89_RS16510 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C4J89_RS16540 PF00768 D-alanyl-D-alanine carboxypeptidase C4J89_RS16555 PF00873 AcrB/AcrD/AcrF family C4J89_RS16560 PF13533 Biotin-lipoyl like C4J89_RS16565 PF02321 Outer membrane efflux protein C4J89_RS16575 PF07687 Peptidase dimerisation domain C4J89_RS16575 PF01546 Peptidase family M20/M25/M40 C4J89_RS16580 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J89_RS16585 PF01979 Amidohydrolase family C4J89_RS16590 PF13247 4Fe-4S dicluster domain C4J89_RS16590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4J89_RS16590 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS16595 PF01180 Dihydroorotate dehydrogenase C4J89_RS16600 PF08362 YcdC-like protein, C-terminal region C4J89_RS16600 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS16605 PF04234 CopC domain C4J89_RS16615 PF03573 outer membrane porin, OprD family C4J89_RS16620 PF01370 NAD dependent epimerase/dehydratase family C4J89_RS16625 PF08450 SMP-30/Gluconolactonase/LRE-like region C4J89_RS16630 PF03480 Bacterial extracellular solute-binding protein, family 7 C4J89_RS16640 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C4J89_RS16650 PF13533 Biotin-lipoyl like C4J89_RS16675 PF00753 Metallo-beta-lactamase superfamily C4J89_RS16680 PF01037 Lrp/AsnC ligand binding domain C4J89_RS16685 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal C4J89_RS16685 PF00676 Dehydrogenase E1 component C4J89_RS16690 PF02779 Transketolase, pyrimidine binding domain C4J89_RS16690 PF02780 Transketolase, C-terminal domain C4J89_RS16695 PF00364 Biotin-requiring enzyme C4J89_RS16695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4J89_RS16695 PF02817 e3 binding domain C4J89_RS16700 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS16700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J89_RS16705 PF01063 Amino-transferase class IV C4J89_RS16710 PF00583 Acetyltransferase (GNAT) family C4J89_RS16725 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) C4J89_RS16735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J89_RS16740 PF00005 ABC transporter C4J89_RS16740 PF02687 FtsX-like permease family C4J89_RS16740 PF12704 MacB-like periplasmic core domain C4J89_RS16755 PF07729 FCD domain C4J89_RS16755 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS16765 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS16775 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J89_RS16775 PF00005 ABC transporter C4J89_RS16780 PF00005 ABC transporter C4J89_RS16785 PF07687 Peptidase dimerisation domain C4J89_RS16785 PF01546 Peptidase family M20/M25/M40 C4J89_RS16790 PF01425 Amidase C4J89_RS16795 PF03466 LysR substrate binding domain C4J89_RS16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS16800 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J89_RS16800 PF00356 Bacterial regulatory proteins, lacI family C4J89_RS16810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J89_RS16810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J89_RS16815 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS16815 PF00107 Zinc-binding dehydrogenase C4J89_RS16820 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS16825 PF00005 ABC transporter C4J89_RS16830 PF13407 Periplasmic binding protein domain C4J89_RS16850 PF00005 ABC transporter C4J89_RS16860 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C4J89_RS16865 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C4J89_RS16890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS16890 PF03466 LysR substrate binding domain C4J89_RS16895 PF03466 LysR substrate binding domain C4J89_RS16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS16900 PF02798 Glutathione S-transferase, N-terminal domain C4J89_RS16930 PF00248 Aldo/keto reductase family C4J89_RS16960 PF01042 Endoribonuclease L-PSP C4J89_RS16965 PF01593 Flavin containing amine oxidoreductase C4J89_RS16970 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS16975 PF00005 ABC transporter C4J89_RS16980 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS16985 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS16985 PF00593 TonB dependent receptor C4J89_RS16990 PF00263 Bacterial type II and III secretion system protein C4J89_RS16990 PF03958 Bacterial type II/III secretion system short domain C4J89_RS17005 PF05137 Fimbrial assembly protein (PilN) C4J89_RS17010 PF03934 Type II secretion system (T2SS), protein K C4J89_RS17025 PF12019 Type II transport protein GspH C4J89_RS17025 PF07963 Prokaryotic N-terminal methylation motif C4J89_RS17030 PF08334 Type II secretion system (T2SS), protein G C4J89_RS17035 PF00482 Type II secretion system (T2SS), protein F C4J89_RS17040 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C4J89_RS17040 PF00437 Type II/IV secretion system protein C4J89_RS17085 PF00375 Sodium:dicarboxylate symporter family C4J89_RS17090 PF13378 Enolase C-terminal domain-like C4J89_RS17095 PF03466 LysR substrate binding domain C4J89_RS17095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS17140 PF00216 Bacterial DNA-binding protein C4J89_RS17145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C4J89_RS17145 PF03483 B3/4 domain C4J89_RS17145 PF03484 tRNA synthetase B5 domain C4J89_RS17145 PF03147 Ferredoxin-fold anticodon binding domain C4J89_RS17145 PF01588 Putative tRNA binding domain C4J89_RS17150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C4J89_RS17150 PF01409 tRNA synthetases class II core domain (F) C4J89_RS17155 PF00453 Ribosomal protein L20 C4J89_RS17160 PF01632 Ribosomal protein L35 C4J89_RS17165 PF00707 Translation initiation factor IF-3, C-terminal domain C4J89_RS17165 PF05198 Translation initiation factor IF-3, N-terminal domain C4J89_RS17170 PF03129 Anticodon binding domain C4J89_RS17170 PF02824 TGS domain C4J89_RS17170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4J89_RS17170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J89_RS17180 PF00313 'Cold-shock' DNA-binding domain C4J89_RS17200 PF01156 Inosine-uridine preferring nucleoside hydrolase C4J89_RS17205 PF05025 RbsD / FucU transport protein family C4J89_RS17210 PF00294 pfkB family carbohydrate kinase C4J89_RS17215 PF00356 Bacterial regulatory proteins, lacI family C4J89_RS17220 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS17225 PF00005 ABC transporter C4J89_RS17230 PF13407 Periplasmic binding protein domain C4J89_RS17235 PF17763 Glutaminase/Asparaginase C-terminal domain C4J89_RS17235 PF00710 Asparaginase, N-terminal C4J89_RS17245 PF04231 Endonuclease I C4J89_RS17255 PF02599 Global regulator protein family C4J89_RS17265 PF13419 Haloacid dehalogenase-like hydrolase C4J89_RS17275 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS17275 PF00072 Response regulator receiver domain C4J89_RS17280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS17280 PF00672 HAMP domain C4J89_RS17280 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS17290 PF01470 Pyroglutamyl peptidase C4J89_RS17310 PF01266 FAD dependent oxidoreductase C4J89_RS17335 PF01053 Cys/Met metabolism PLP-dependent enzyme C4J89_RS17340 PF00156 Phosphoribosyl transferase domain C4J89_RS17345 PF02674 Colicin V production protein C4J89_RS17350 PF05036 Sporulation related domain C4J89_RS17355 PF08245 Mur ligase middle domain C4J89_RS17355 PF02875 Mur ligase family, glutamate ligase domain C4J89_RS17360 PF17848 Acetyl-coA carboxylase zinc finger domain C4J89_RS17360 PF01039 Carboxyl transferase domain C4J89_RS17365 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C4J89_RS17370 PF01416 tRNA pseudouridine synthase C4J89_RS17380 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4J89_RS17380 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4J89_RS17385 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4J89_RS17385 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4J89_RS17390 PF00180 Isocitrate/isopropylmalate dehydrogenase C4J89_RS17395 PF08241 Methyltransferase domain C4J89_RS17400 PF00694 Aconitase C-terminal domain C4J89_RS17405 PF00330 Aconitase family (aconitate hydratase) C4J89_RS17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS17415 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS17415 PF00563 EAL domain C4J89_RS17415 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS17430 PF01207 Dihydrouridine synthase (Dus) C4J89_RS17440 PF00561 alpha/beta hydrolase fold C4J89_RS17470 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4J89_RS17475 PF00271 Helicase conserved C-terminal domain C4J89_RS17475 PF02151 UvrB/uvrC motif C4J89_RS17475 PF12344 Ultra-violet resistance protein B C4J89_RS17475 PF17757 UvrB interaction domain C4J89_RS17475 PF04851 Type III restriction enzyme, res subunit C4J89_RS17480 PF00155 Aminotransferase class I and II C4J89_RS17490 PF03466 LysR substrate binding domain C4J89_RS17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS17495 PF00171 Aldehyde dehydrogenase family C4J89_RS17505 PF01447 Thermolysin metallopeptidase, catalytic domain C4J89_RS17505 PF16485 Protealysin propeptide C4J89_RS17505 PF02868 Thermolysin metallopeptidase, alpha-helical domain C4J89_RS17515 PF01497 Periplasmic binding protein C4J89_RS17520 PF01032 FecCD transport family C4J89_RS17525 PF00005 ABC transporter C4J89_RS17530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS17530 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS17530 PF08448 PAS fold C4J89_RS17530 PF13426 PAS domain C4J89_RS17530 PF00072 Response regulator receiver domain C4J89_RS17540 PF03073 TspO/MBR family C4J89_RS17560 PF02567 Phenazine biosynthesis-like protein C4J89_RS17565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS17565 PF03466 LysR substrate binding domain C4J89_RS17570 PF01042 Endoribonuclease L-PSP C4J89_RS17610 PF04134 Protein of unknown function, DUF393 C4J89_RS17625 PF00083 Sugar (and other) transporter C4J89_RS17635 PF00324 Amino acid permease C4J89_RS17660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS17660 PF00672 HAMP domain C4J89_RS17665 PF04816 tRNA (adenine(22)-N(1))-methyltransferase C4J89_RS17670 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS17670 PF07729 FCD domain C4J89_RS17675 PF07690 Major Facilitator Superfamily C4J89_RS17680 PF13378 Enolase C-terminal domain-like C4J89_RS17680 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J89_RS17690 PF05973 Phage derived protein Gp49-like (DUF891) C4J89_RS17695 PF12804 MobA-like NTP transferase domain C4J89_RS17695 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS17695 PF14602 Hexapeptide repeat of succinyl-transferase C4J89_RS17715 PF04143 Sulphur transport C4J89_RS17725 PF03466 LysR substrate binding domain C4J89_RS17725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS17730 PF01070 FMN-dependent dehydrogenase C4J89_RS17735 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS17745 PF00563 EAL domain C4J89_RS17745 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS17745 PF08448 PAS fold C4J89_RS17750 PF00664 ABC transporter transmembrane region C4J89_RS17750 PF00005 ABC transporter C4J89_RS17760 PF17773 UPF0176 acylphosphatase like domain C4J89_RS17760 PF00581 Rhodanese-like domain C4J89_RS17765 PF14431 YwqJ-like deaminase C4J89_RS17765 PF18807 Tripartite Tc toxins repeat C4J89_RS17770 PF03538 Salmonella virulence plasmid 28.1kDa A protein C4J89_RS17775 PF18413 Neuraminidase-like domain C4J89_RS17775 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain C4J89_RS17780 PF03534 Salmonella virulence plasmid 65kDa B protein C4J89_RS17780 PF12255 Insecticide toxin TcdB middle/C-terminal region C4J89_RS17780 PF12256 Insecticide toxin TcdB middle/N-terminal region C4J89_RS17785 PF05785 Rho-activating domain of cytotoxic necrotizing factor C4J89_RS17785 PF18807 Tripartite Tc toxins repeat C4J89_RS17790 PF01722 BolA-like protein C4J89_RS17800 PF00206 Lyase C4J89_RS17800 PF10415 Fumarase C C-terminus C4J89_RS17815 PF00892 EamA-like transporter family C4J89_RS17825 PF00419 Fimbrial protein C4J89_RS17830 PF00419 Fimbrial protein C4J89_RS17835 PF00419 Fimbrial protein C4J89_RS17845 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J89_RS17845 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J89_RS17850 PF00577 Outer membrane usher protein C4J89_RS17850 PF13954 PapC N-terminal domain C4J89_RS17850 PF13953 PapC C-terminal domain C4J89_RS17855 PF00419 Fimbrial protein C4J89_RS17860 PF00419 Fimbrial protein C4J89_RS17865 PF01925 Sulfite exporter TauE/SafE C4J89_RS17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS17870 PF03466 LysR substrate binding domain C4J89_RS17875 PF02803 Thiolase, C-terminal domain C4J89_RS17875 PF00108 Thiolase, N-terminal domain C4J89_RS17880 PF03976 Polyphosphate kinase 2 (PPK2) C4J89_RS17885 PF01266 FAD dependent oxidoreductase C4J89_RS17885 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C4J89_RS17890 PF00733 Asparagine synthase C4J89_RS17890 PF13537 Glutamine amidotransferase domain C4J89_RS17895 PF08443 RimK-like ATP-grasp domain C4J89_RS17895 PF08245 Mur ligase middle domain C4J89_RS17895 PF02875 Mur ligase family, glutamate ligase domain C4J89_RS17905 PF05343 M42 glutamyl aminopeptidase C4J89_RS17910 PF06794 Uncharacterised protein family (UPF0270) C4J89_RS17915 PF02599 Global regulator protein family C4J89_RS17920 PF00106 short chain dehydrogenase C4J89_RS17920 PF00561 alpha/beta hydrolase fold C4J89_RS17930 PF00884 Sulfatase C4J89_RS17955 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS17955 PF03472 Autoinducer binding domain C4J89_RS17960 PF03079 ARD/ARD' family C4J89_RS17970 PF01264 Chorismate synthase C4J89_RS17975 PF13026 Protein of unknown function (DUF3887) C4J89_RS17975 PF12146 Serine aminopeptidase, S33 C4J89_RS17985 PF05175 Methyltransferase small domain C4J89_RS18000 PF01713 Smr domain C4J89_RS18005 PF01227 GTP cyclohydrolase I C4J89_RS18025 PF03600 Citrate transporter C4J89_RS18030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS18030 PF03466 LysR substrate binding domain C4J89_RS18040 PF02798 Glutathione S-transferase, N-terminal domain C4J89_RS18045 PF00860 Permease family C4J89_RS18055 PF00576 HIUase/Transthyretin family C4J89_RS18065 PF01522 Polysaccharide deacetylase C4J89_RS18070 PF09349 OHCU decarboxylase C4J89_RS18070 PF01014 Uricase C4J89_RS18075 PF03561 Allantoicase repeat C4J89_RS18080 PF04115 Ureidoglycolate lyase C4J89_RS18090 PF00860 Permease family C4J89_RS18105 PF03279 Bacterial lipid A biosynthesis acyltransferase C4J89_RS18110 PF05209 Septum formation inhibitor MinC, N-terminal domain C4J89_RS18110 PF03775 Septum formation inhibitor MinC, C-terminal domain C4J89_RS18115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J89_RS18120 PF03776 Septum formation topological specificity factor MinE C4J89_RS18125 PF00849 RNA pseudouridylate synthase C4J89_RS18130 PF02127 Aminopeptidase I zinc metalloprotease (M18) C4J89_RS18135 PF00924 Mechanosensitive ion channel C4J89_RS18140 PF03621 MbtH-like protein C4J89_RS18145 PF00202 Aminotransferase class-III C4J89_RS18155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS18155 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS18160 PF00072 Response regulator receiver domain C4J89_RS18160 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS18165 PF02683 Cytochrome C biogenesis protein transmembrane region C4J89_RS18165 PF11412 Disulphide bond corrector protein DsbC C4J89_RS18170 PF00578 AhpC/TSA family C4J89_RS18175 PF13098 Thioredoxin-like domain C4J89_RS18205 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS18205 PF00501 AMP-binding enzyme C4J89_RS18205 PF00550 Phosphopantetheine attachment site C4J89_RS18205 PF00668 Condensation domain C4J89_RS18205 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS18205 PF00668 Condensation domain C4J89_RS18205 PF00550 Phosphopantetheine attachment site C4J89_RS18205 PF00501 AMP-binding enzyme C4J89_RS18210 PF00975 Thioesterase domain C4J89_RS18225 PF17932 Tetracyclin repressor-like, C-terminal domain C4J89_RS18225 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS18235 PF06865 Pyrimidine/purine nucleoside phosphorylase C4J89_RS18240 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J89_RS18240 PF03473 MOSC domain C4J89_RS18240 PF03476 MOSC N-terminal beta barrel domain C4J89_RS18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS18255 PF07730 Histidine kinase C4J89_RS18255 PF05231 MASE1 C4J89_RS18260 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS18260 PF00072 Response regulator receiver domain C4J89_RS18265 PF00781 Diacylglycerol kinase catalytic domain C4J89_RS18280 PF01584 CheW-like domain C4J89_RS18290 PF13614 AAA domain C4J89_RS18295 PF13677 Membrane MotB of proton-channel complex MotA/MotB C4J89_RS18295 PF00691 OmpA family C4J89_RS18300 PF01618 MotA/TolQ/ExbB proton channel family C4J89_RS18305 PF00072 Response regulator receiver domain C4J89_RS18305 PF01339 CheB methylesterase C4J89_RS18310 PF02895 Signal transducing histidine kinase, homodimeric domain C4J89_RS18310 PF00072 Response regulator receiver domain C4J89_RS18310 PF01584 CheW-like domain C4J89_RS18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS18310 PF01627 Hpt domain C4J89_RS18315 PF04344 Chemotaxis phosphatase, CheZ C4J89_RS18320 PF00072 Response regulator receiver domain C4J89_RS18325 PF04542 Sigma-70 region 2 C4J89_RS18325 PF04545 Sigma-70, region 4 C4J89_RS18325 PF04539 Sigma-70 region 3 C4J89_RS18330 PF10609 NUBPL iron-transfer P-loop NTPase C4J89_RS18335 PF00448 SRP54-type protein, GTPase domain C4J89_RS18340 PF00771 FHIPEP family C4J89_RS18355 PF01312 FlhB HrpN YscU SpaS Family C4J89_RS18360 PF01311 Bacterial export proteins, family 1 C4J89_RS18365 PF01313 Bacterial export proteins, family 3 C4J89_RS18370 PF00813 FliP family C4J89_RS18375 PF04347 Flagellar biosynthesis protein, FliO C4J89_RS18380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J89_RS18385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J89_RS18385 PF02154 Flagellar motor switch protein FliM C4J89_RS18405 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS18405 PF00072 Response regulator receiver domain C4J89_RS18410 PF13466 STAS domain C4J89_RS18420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J89_RS18420 PF18269 T3SS EscN ATPase C-terminal domain C4J89_RS18430 PF14841 FliG middle domain C4J89_RS18430 PF14842 FliG N-terminal domain C4J89_RS18430 PF01706 FliG C-terminal domain C4J89_RS18435 PF08345 Flagellar M-ring protein C-terminal C4J89_RS18435 PF01514 Secretory protein of YscJ/FliF family C4J89_RS18440 PF02049 Flagellar hook-basal body complex protein FliE C4J89_RS18445 PF02954 Bacterial regulatory protein, Fis family C4J89_RS18445 PF00158 Sigma-54 interaction domain C4J89_RS18445 PF00072 Response regulator receiver domain C4J89_RS18450 PF13188 PAS domain C4J89_RS18450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS18450 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS18455 PF00158 Sigma-54 interaction domain C4J89_RS18455 PF02954 Bacterial regulatory protein, Fis family C4J89_RS18455 PF06490 Flagellar regulatory protein FleQ C4J89_RS18465 PF02561 Flagellar protein FliS C4J89_RS18470 PF02465 Flagellar hook-associated protein 2 N-terminus C4J89_RS18470 PF07196 Flagellin hook IN motif C4J89_RS18470 PF07195 Flagellar hook-associated protein 2 C-terminus C4J89_RS18480 PF07196 Flagellin hook IN motif C4J89_RS18480 PF00700 Bacterial flagellin C-terminal helical region C4J89_RS18480 PF00669 Bacterial flagellin N-terminal helical region C4J89_RS18485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C4J89_RS18485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C4J89_RS18495 PF00460 Flagella basal body rod protein C4J89_RS18495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J89_RS18500 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C4J89_RS18500 PF10135 Rod binding protein C4J89_RS18505 PF02119 Flagellar P-ring protein C4J89_RS18510 PF02107 Flagellar L-ring protein C4J89_RS18515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J89_RS18515 PF00460 Flagella basal body rod protein C4J89_RS18520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J89_RS18520 PF00460 Flagella basal body rod protein C4J89_RS18525 PF00158 Sigma-54 interaction domain C4J89_RS18525 PF18024 Helix-turn-helix domain C4J89_RS18530 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C4J89_RS18535 PF01329 Pterin 4 alpha carbinolamine dehydratase C4J89_RS18540 PF00155 Aminotransferase class I and II C4J89_RS18550 PF12852 Cupin C4J89_RS18550 PF12833 Helix-turn-helix domain C4J89_RS18565 PF01734 Patatin-like phospholipase C4J89_RS18570 PF01047 MarR family C4J89_RS18575 PF00270 DEAD/DEAH box helicase C4J89_RS18575 PF00271 Helicase conserved C-terminal domain C4J89_RS18575 PF00570 HRDC domain C4J89_RS18575 PF09382 RQC domain C4J89_RS18575 PF16124 RecQ zinc-binding C4J89_RS18585 PF04304 Protein of unknown function (DUF454) C4J89_RS18590 PF00072 Response regulator receiver domain C4J89_RS18590 PF01627 Hpt domain C4J89_RS18590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS18590 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS18590 PF00672 HAMP domain C4J89_RS18595 PF02646 RmuC family C4J89_RS18625 PF00255 Glutathione peroxidase C4J89_RS18640 PF02654 Cobalamin-5-phosphate synthase C4J89_RS18645 PF00300 Histidine phosphatase superfamily (branch 1) C4J89_RS18650 PF02277 Phosphoribosyltransferase C4J89_RS18655 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C4J89_RS18660 PF07685 CobB/CobQ-like glutamine amidotransferase domain C4J89_RS18660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J89_RS18665 PF00155 Aminotransferase class I and II C4J89_RS18670 PF03186 CobD/Cbib protein C4J89_RS18670 PF17113 Regulatory signalling modulator protein AmpE C4J89_RS18675 PF00881 Nitroreductase family C4J89_RS18680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J89_RS18680 PF07685 CobB/CobQ-like glutamine amidotransferase domain C4J89_RS18685 PF12557 Cob(I)alamin adenosyltransferase N terminal C4J89_RS18685 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C4J89_RS18690 PF07995 Glucose / Sorbosone dehydrogenase C4J89_RS18695 PF00877 NlpC/P60 family C4J89_RS18700 PF00877 NlpC/P60 family C4J89_RS18705 PF00308 Bacterial dnaA protein C4J89_RS18710 PF01594 AI-2E family transporter C4J89_RS18720 PF02769 AIR synthase related protein, C-terminal domain C4J89_RS18720 PF00586 AIR synthase related protein, N-terminal domain C4J89_RS18725 PF00551 Formyl transferase C4J89_RS18740 PF04183 IucA / IucC family C4J89_RS18740 PF06276 Ferric iron reductase FhuF-like transporter C4J89_RS18745 PF07690 Major Facilitator Superfamily C4J89_RS18750 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS18750 PF00593 TonB dependent receptor C4J89_RS18755 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) C4J89_RS18760 PF03819 MazG nucleotide pyrophosphohydrolase domain C4J89_RS18765 PF02824 TGS domain C4J89_RS18765 PF04607 Region found in RelA / SpoT proteins C4J89_RS18765 PF13291 ACT domain C4J89_RS18770 PF01938 TRAM domain C4J89_RS18770 PF05958 tRNA (Uracil-5-)-methyltransferase C4J89_RS18775 PF00291 Pyridoxal-phosphate dependent enzyme C4J89_RS18785 PF03466 LysR substrate binding domain C4J89_RS18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS18790 PF00491 Arginase family C4J89_RS18805 PF00474 Sodium:solute symporter family C4J89_RS18815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS18815 PF03466 LysR substrate binding domain C4J89_RS18825 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J89_RS18835 PF17783 CvfB-like winged helix domain C4J89_RS18835 PF13509 S1 domain C4J89_RS18865 PF00270 DEAD/DEAH box helicase C4J89_RS18865 PF00271 Helicase conserved C-terminal domain C4J89_RS18870 PF01209 ubiE/COQ5 methyltransferase family C4J89_RS18895 PF00892 EamA-like transporter family C4J89_RS18900 PF02525 Flavodoxin-like fold C4J89_RS18920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C4J89_RS18925 PF00664 ABC transporter transmembrane region C4J89_RS18925 PF00005 ABC transporter C4J89_RS18945 PF08281 Sigma-70, region 4 C4J89_RS18945 PF04542 Sigma-70 region 2 C4J89_RS18950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C4J89_RS18950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C4J89_RS18955 PF11898 Domain of unknown function (DUF3418) C4J89_RS18955 PF00270 DEAD/DEAH box helicase C4J89_RS18955 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C4J89_RS18955 PF04408 Helicase associated domain (HA2) C4J89_RS18955 PF00271 Helicase conserved C-terminal domain C4J89_RS18970 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C4J89_RS18990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS18990 PF08447 PAS fold C4J89_RS19000 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J89_RS19015 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J89_RS19015 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C4J89_RS19020 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J89_RS19035 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C4J89_RS19035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J89_RS19050 PF12801 4Fe-4S binding domain C4J89_RS19050 PF13746 4Fe-4S dicluster domain C4J89_RS19050 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C4J89_RS19060 PF00403 Heavy-metal-associated domain C4J89_RS19075 PF06969 HemN C-terminal domain C4J89_RS19075 PF04055 Radical SAM superfamily C4J89_RS19085 PF00027 Cyclic nucleotide-binding domain C4J89_RS19085 PF13545 Crp-like helix-turn-helix domain C4J89_RS19090 PF00156 Phosphoribosyl transferase domain C4J89_RS19095 PF02132 RecR protein C4J89_RS19095 PF13662 Toprim domain C4J89_RS19100 PF00107 Zinc-binding dehydrogenase C4J89_RS19100 PF16884 N-terminal domain of oxidoreductase C4J89_RS19105 PF02575 YbaB/EbfC DNA-binding family C4J89_RS19110 PF12169 DNA polymerase III subunits gamma and tau domain III C4J89_RS19110 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C4J89_RS19110 PF12170 DNA polymerase III tau subunit V interacting with alpha C4J89_RS19135 PF10005 zinc-ribbon domain C4J89_RS19135 PF15887 Putative zinc-binding metallo-peptidase C4J89_RS19140 PF12826 Helix-hairpin-helix motif C4J89_RS19140 PF03120 NAD-dependent DNA ligase OB-fold domain C4J89_RS19140 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C4J89_RS19140 PF00533 BRCA1 C Terminus (BRCT) domain C4J89_RS19140 PF01653 NAD-dependent DNA ligase adenylation domain C4J89_RS19145 PF04354 ZipA, C-terminal FtsZ-binding domain C4J89_RS19150 PF02463 RecF/RecN/SMC N terminal domain C4J89_RS19160 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J89_RS19160 PF01799 [2Fe-2S] binding domain C4J89_RS19165 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J89_RS19165 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C4J89_RS19175 PF01979 Amidohydrolase family C4J89_RS19180 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS19180 PF07729 FCD domain C4J89_RS19185 PF03594 Benzoate membrane transport protein C4J89_RS19190 PF04320 Protein with unknown function (DUF469) C4J89_RS19195 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C4J89_RS19200 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS19205 PF01170 Putative RNA methylase family UPF0020 C4J89_RS19205 PF02926 THUMP domain C4J89_RS19205 PF10672 S-adenosylmethionine-dependent methyltransferase C4J89_RS19210 PF04957 Ribosome modulation factor C4J89_RS19215 PF01180 Dihydroorotate dehydrogenase C4J89_RS19220 PF01464 Transglycosylase SLT domain C4J89_RS19225 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS19230 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J89_RS19235 PF03958 Bacterial type II/III secretion system short domain C4J89_RS19235 PF00263 Bacterial type II and III secretion system protein C4J89_RS19240 PF00005 ABC transporter C4J89_RS19245 PF03861 ANTAR domain C4J89_RS19245 PF08376 Nitrate and nitrite sensing C4J89_RS19250 PF07690 Major Facilitator Superfamily C4J89_RS19255 PF13191 AAA ATPase domain C4J89_RS19255 PF00069 Protein kinase domain C4J89_RS19260 PF18267 Rubredoxin NAD+ reductase C-terminal domain C4J89_RS19260 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS19260 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4J89_RS19260 PF04324 BFD-like [2Fe-2S] binding domain C4J89_RS19260 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4J89_RS19265 PF00355 Rieske [2Fe-2S] domain C4J89_RS19270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4J89_RS19270 PF00384 Molybdopterin oxidoreductase C4J89_RS19270 PF04324 BFD-like [2Fe-2S] binding domain C4J89_RS19270 PF01568 Molydopterin dinucleotide binding domain C4J89_RS19275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J89_RS19280 PF00691 OmpA family C4J89_RS19280 PF05736 OprF membrane domain C4J89_RS19300 PF01544 CorA-like Mg2+ transporter protein C4J89_RS19305 PF03737 Aldolase/RraA C4J89_RS19315 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C4J89_RS19315 PF00391 PEP-utilising enzyme, mobile domain C4J89_RS19315 PF02896 PEP-utilising enzyme, TIM barrel domain C4J89_RS19320 PF03618 Kinase/pyrophosphorylase C4J89_RS19325 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS19325 PF00155 Aminotransferase class I and II C4J89_RS19330 PF00892 EamA-like transporter family C4J89_RS19335 PF00581 Rhodanese-like domain C4J89_RS19335 PF00899 ThiF family C4J89_RS19340 PF00291 Pyridoxal-phosphate dependent enzyme C4J89_RS19345 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS19350 PF02272 DHHA1 domain C4J89_RS19350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J89_RS19350 PF01411 tRNA synthetases class II (A) C4J89_RS19355 PF03972 MmgE/PrpD family C4J89_RS19360 PF04303 PrpF protein C4J89_RS19365 PF00330 Aconitase family (aconitate hydratase) C4J89_RS19365 PF00694 Aconitase C-terminal domain C4J89_RS19370 PF00285 Citrate synthase, C-terminal domain C4J89_RS19380 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS19380 PF07729 FCD domain C4J89_RS19385 PF18030 RimK PreATP-grasp domain C4J89_RS19385 PF08443 RimK-like ATP-grasp domain C4J89_RS19395 PF18030 RimK PreATP-grasp domain C4J89_RS19395 PF08443 RimK-like ATP-grasp domain C4J89_RS19400 PF04715 Anthranilate synthase component I, N terminal region C4J89_RS19400 PF00425 chorismate binding enzyme C4J89_RS19420 PF01507 Phosphoadenosine phosphosulfate reductase family C4J89_RS19425 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J89_RS19430 PF01177 Asp/Glu/Hydantoin racemase C4J89_RS19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS19435 PF03466 LysR substrate binding domain C4J89_RS19445 PF13419 Haloacid dehalogenase-like hydrolase C4J89_RS19475 PF02805 Metal binding domain of Ada C4J89_RS19475 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C4J89_RS19475 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C4J89_RS19475 PF12833 Helix-turn-helix domain C4J89_RS19480 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA C4J89_RS19495 PF02463 RecF/RecN/SMC N terminal domain C4J89_RS19500 PF00732 GMC oxidoreductase C4J89_RS19500 PF05199 GMC oxidoreductase C4J89_RS19505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS19505 PF03466 LysR substrate binding domain C4J89_RS19520 PF03358 NADPH-dependent FMN reductase C4J89_RS19580 PF01043 SecA preprotein cross-linking domain C4J89_RS19580 PF07517 SecA DEAD-like domain C4J89_RS19580 PF02810 SEC-C motif C4J89_RS19580 PF07516 SecA Wing and Scaffold domain C4J89_RS19605 PF02195 ParB-like nuclease domain C4J89_RS19650 PF01553 Acyltransferase C4J89_RS19655 PF01544 CorA-like Mg2+ transporter protein C4J89_RS19660 PF00958 GMP synthase C terminal domain C4J89_RS19660 PF02540 NAD synthase C4J89_RS19660 PF00117 Glutamine amidotransferase class-I C4J89_RS19665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J89_RS19665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J89_RS19665 PF00378 Enoyl-CoA hydratase/isomerase C4J89_RS19670 PF02803 Thiolase, C-terminal domain C4J89_RS19670 PF00108 Thiolase, N-terminal domain C4J89_RS19680 PF08379 Bacterial transglutaminase-like N-terminal region C4J89_RS19680 PF01841 Transglutaminase-like superfamily C4J89_RS19685 PF14403 Circularly permuted ATP-grasp type 2 C4J89_RS19685 PF04168 A predicted alpha-helical domain with a conserved ER motif. C4J89_RS19690 PF14403 Circularly permuted ATP-grasp type 2 C4J89_RS19705 PF01852 START domain C4J89_RS19710 PF03692 Putative zinc- or iron-chelating domain C4J89_RS19720 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS19720 PF00155 Aminotransferase class I and II C4J89_RS19725 PF05736 OprF membrane domain C4J89_RS19725 PF00691 OmpA family C4J89_RS19740 PF01012 Electron transfer flavoprotein domain C4J89_RS19740 PF00766 Electron transfer flavoprotein FAD-binding domain C4J89_RS19745 PF01012 Electron transfer flavoprotein domain C4J89_RS19755 PF06719 AraC-type transcriptional regulator N-terminus C4J89_RS19755 PF12833 Helix-turn-helix domain C4J89_RS19760 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS19760 PF00107 Zinc-binding dehydrogenase C4J89_RS19765 PF01614 Bacterial transcriptional regulator C4J89_RS19765 PF09339 IclR helix-turn-helix domain C4J89_RS19770 PF02653 Branched-chain amino acid transport system / permease component C4J89_RS19775 PF00005 ABC transporter C4J89_RS19780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J89_RS19810 PF00294 pfkB family carbohydrate kinase C4J89_RS19820 PF03747 ADP-ribosylglycohydrolase C4J89_RS19825 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS19825 PF07702 UTRA domain C4J89_RS19840 PF04055 Radical SAM superfamily C4J89_RS19840 PF06463 Molybdenum Cofactor Synthesis C C4J89_RS19845 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS19850 PF01026 TatD related DNase C4J89_RS19855 PF09115 DNA polymerase III, delta subunit, C terminal C4J89_RS19860 PF02223 Thymidylate kinase C4J89_RS19865 PF02618 YceG-like family C4J89_RS19870 PF01063 Amino-transferase class IV C4J89_RS19875 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J89_RS19875 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J89_RS19880 PF00550 Phosphopantetheine attachment site C4J89_RS19890 PF00698 Acyl transferase domain C4J89_RS19895 PF02504 Fatty acid synthesis protein C4J89_RS19900 PF01783 Ribosomal L32p protein family C4J89_RS19905 PF02620 Large ribosomal RNA subunit accumulation protein YceD C4J89_RS19910 PF02545 Maf-like protein C4J89_RS19915 PF01343 Peptidase family S49 C4J89_RS19915 PF06965 Na+/H+ antiporter 1 C4J89_RS19920 PF13419 Haloacid dehalogenase-like hydrolase C4J89_RS19925 PF01479 S4 domain C4J89_RS19925 PF00849 RNA pseudouridylate synthase C4J89_RS19930 PF12111 Polyribonucleotide phosphorylase C terminal C4J89_RS19930 PF00575 S1 RNA binding domain C4J89_RS19930 PF10150 Ribonuclease E/G family C4J89_RS19935 PF12804 MobA-like NTP transferase domain C4J89_RS19935 PF14602 Hexapeptide repeat of succinyl-transferase C4J89_RS19935 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS19940 PF02625 XdhC and CoxI family C4J89_RS19940 PF13478 XdhC Rossmann domain C4J89_RS19945 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J89_RS19950 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J89_RS19950 PF01799 [2Fe-2S] binding domain C4J89_RS19955 PF00375 Sodium:dicarboxylate symporter family C4J89_RS19960 PF02311 AraC-like ligand binding domain C4J89_RS19960 PF12833 Helix-turn-helix domain C4J89_RS19965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS19970 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS19970 PF00072 Response regulator receiver domain C4J89_RS19980 PF01648 4'-phosphopantetheinyl transferase superfamily C4J89_RS19980 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C4J89_RS19985 PF00672 HAMP domain C4J89_RS19985 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS19985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS19990 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS19990 PF00072 Response regulator receiver domain C4J89_RS19995 PF03477 ATP cone domain C4J89_RS19995 PF02867 Ribonucleotide reductase, barrel domain C4J89_RS19995 PF00317 Ribonucleotide reductase, all-alpha domain C4J89_RS20005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J89_RS20005 PF00460 Flagella basal body rod protein C4J89_RS20005 PF07559 Flagellar basal body protein FlaE C4J89_RS20010 PF03963 Flagellar hook capping protein - N-terminal region C4J89_RS20010 PF13860 FlgD Ig-like domain C4J89_RS20010 PF13861 FlgD Tudor-like domain C4J89_RS20015 PF00460 Flagella basal body rod protein C4J89_RS20015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J89_RS20020 PF00460 Flagella basal body rod protein C4J89_RS20025 PF03705 CheR methyltransferase, all-alpha domain C4J89_RS20025 PF01739 CheR methyltransferase, SAM binding domain C4J89_RS20030 PF00072 Response regulator receiver domain C4J89_RS20030 PF01584 CheW-like domain C4J89_RS20050 PF07238 PilZ domain C4J89_RS20050 PF07317 Flagellar regulator YcgR C4J89_RS20055 PF07690 Major Facilitator Superfamily C4J89_RS20105 PF03869 Arc-like DNA binding domain C4J89_RS20110 PF01769 Divalent cation transporter C4J89_RS20110 PF00571 CBS domain C4J89_RS20110 PF03448 MgtE intracellular N domain C4J89_RS20130 PF02599 Global regulator protein family C4J89_RS20135 PF00696 Amino acid kinase family C4J89_RS20135 PF01842 ACT domain C4J89_RS20135 PF13840 ACT domain C4J89_RS20140 PF02272 DHHA1 domain C4J89_RS20140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J89_RS20140 PF01411 tRNA synthetases class II (A) C4J89_RS20145 PF01212 Beta-eliminating lyase C4J89_RS20150 PF00885 6,7-dimethyl-8-ribityllumazine synthase C4J89_RS20155 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C4J89_RS20165 PF04996 Succinylarginine dihydrolase C4J89_RS20170 PF00171 Aldehyde dehydrogenase family C4J89_RS20175 PF04958 Arginine N-succinyltransferase beta subunit C4J89_RS20180 PF04958 Arginine N-succinyltransferase beta subunit C4J89_RS20185 PF00202 Aminotransferase class-III C4J89_RS20195 PF12833 Helix-turn-helix domain C4J89_RS20200 PF00005 ABC transporter C4J89_RS20210 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS20215 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS20220 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS20230 PF00501 AMP-binding enzyme C4J89_RS20230 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS20230 PF16177 Acetyl-coenzyme A synthetase N-terminus C4J89_RS20240 PF00268 Ribonucleotide reductase, small chain C4J89_RS20270 PF01425 Amidase C4J89_RS20280 PF12706 Beta-lactamase superfamily domain C4J89_RS20290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS20290 PF08447 PAS fold C4J89_RS20290 PF13426 PAS domain C4J89_RS20305 PF00117 Glutamine amidotransferase class-I C4J89_RS20305 PF06418 CTP synthase N-terminus C4J89_RS20310 PF03992 Antibiotic biosynthesis monooxygenase C4J89_RS20325 PF03009 Glycerophosphoryl diester phosphodiesterase family C4J89_RS20340 PF01384 Phosphate transporter family C4J89_RS20345 PF03466 LysR substrate binding domain C4J89_RS20345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS20360 PF03466 LysR substrate binding domain C4J89_RS20360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS20375 PF13657 HipA N-terminal domain C4J89_RS20375 PF07804 HipA-like C-terminal domain C4J89_RS20385 PF00155 Aminotransferase class I and II C4J89_RS20395 PF02447 GntP family permease C4J89_RS20405 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J89_RS20405 PF00356 Bacterial regulatory proteins, lacI family C4J89_RS20410 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C4J89_RS20410 PF01409 tRNA synthetases class II core domain (F) C4J89_RS20440 PF00083 Sugar (and other) transporter C4J89_RS20450 PF09084 NMT1/THI5 like C4J89_RS20460 PF01327 Polypeptide deformylase C4J89_RS20465 PF03631 Virulence factor BrkB C4J89_RS20470 PF05532 CsbD-like C4J89_RS20480 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS20480 PF00501 AMP-binding enzyme C4J89_RS20485 PF00501 AMP-binding enzyme C4J89_RS20485 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS20495 PF01575 MaoC like domain C4J89_RS20505 PF12843 Putative quorum-sensing-regulated virulence factor C4J89_RS20510 PF00266 Aminotransferase class-V C4J89_RS20515 PF01081 KDPG and KHG aldolase C4J89_RS20520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C4J89_RS20525 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C4J89_RS20525 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C4J89_RS20530 PF01380 SIS domain C4J89_RS20530 PF01418 Helix-turn-helix domain, rpiR family C4J89_RS20535 PF01263 Aldose 1-epimerase C4J89_RS20540 PF04966 Carbohydrate-selective porin, OprB family C4J89_RS20545 PF17912 MalK OB fold domain C4J89_RS20545 PF00005 ABC transporter C4J89_RS20545 PF03459 TOBE domain C4J89_RS20550 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS20555 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS20560 PF01547 Bacterial extracellular solute-binding protein C4J89_RS20575 PF01370 NAD dependent epimerase/dehydratase family C4J89_RS20580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS20580 PF03466 LysR substrate binding domain C4J89_RS20590 PF01810 LysE type translocator C4J89_RS20595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C4J89_RS20595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C4J89_RS20605 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS20605 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS20605 PF00563 EAL domain C4J89_RS20615 PF02386 Cation transport protein C4J89_RS20620 PF12833 Helix-turn-helix domain C4J89_RS20620 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J89_RS20635 PF07690 Major Facilitator Superfamily C4J89_RS20640 PF00472 RF-1 domain C4J89_RS20650 PF00324 Amino acid permease C4J89_RS20660 PF00849 RNA pseudouridylate synthase C4J89_RS20660 PF01479 S4 domain C4J89_RS20670 PF04079 Segregation and condensation complex subunit ScpB C4J89_RS20675 PF02616 Segregation and condensation protein ScpA C4J89_RS20680 PF01300 Telomere recombination C4J89_RS20685 PF02811 PHP domain C4J89_RS20690 PF04279 Intracellular septation protein A C4J89_RS20695 PF03795 YCII-related domain C4J89_RS20705 PF00072 Response regulator receiver domain C4J89_RS20705 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS20715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS20715 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS20715 PF08521 Two-component sensor kinase N-terminal C4J89_RS20720 PF02515 CoA-transferase family III C4J89_RS20725 PF13520 Amino acid permease C4J89_RS20730 PF13520 Amino acid permease C4J89_RS20740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4J89_RS20740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4J89_RS20745 PF00696 Amino acid kinase family C4J89_RS20755 PF00158 Sigma-54 interaction domain C4J89_RS20755 PF18024 Helix-turn-helix domain C4J89_RS20765 PF01597 Glycine cleavage H-protein C4J89_RS20770 PF02347 Glycine cleavage system P-protein C4J89_RS20775 PF03313 Serine dehydratase alpha chain C4J89_RS20775 PF03315 Serine dehydratase beta chain C4J89_RS20780 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4J89_RS20780 PF01571 Aminomethyltransferase folate-binding domain C4J89_RS20785 PF00313 'Cold-shock' DNA-binding domain C4J89_RS20800 PF02445 Quinolinate synthetase A protein C4J89_RS20810 PF07993 Male sterility protein C4J89_RS20810 PF00668 Condensation domain C4J89_RS20810 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS20810 PF00501 AMP-binding enzyme C4J89_RS20810 PF00550 Phosphopantetheine attachment site C4J89_RS20830 PF07690 Major Facilitator Superfamily C4J89_RS20835 PF13533 Biotin-lipoyl like C4J89_RS20840 PF02321 Outer membrane efflux protein C4J89_RS20850 PF08502 LeuA allosteric (dimerisation) domain C4J89_RS20850 PF00682 HMGL-like C4J89_RS20860 PF04055 Radical SAM superfamily C4J89_RS20865 PF16331 TolA binding protein trimerisation C4J89_RS20865 PF13525 Outer membrane lipoprotein C4J89_RS20870 PF00691 OmpA family C4J89_RS20875 PF04052 TolB amino-terminal domain C4J89_RS20875 PF07676 WD40-like Beta Propeller Repeat C4J89_RS20885 PF02472 Biopolymer transport protein ExbD/TolR C4J89_RS20890 PF01618 MotA/TolQ/ExbB proton channel family C4J89_RS20895 PF03061 Thioesterase superfamily C4J89_RS20905 PF05496 Holliday junction DNA helicase RuvB P-loop domain C4J89_RS20905 PF05491 RuvB C-terminal winged helix domain C4J89_RS20905 PF17864 RuvB AAA lid domain C4J89_RS20910 PF01330 RuvA N terminal domain C4J89_RS20910 PF07499 RuvA, C-terminal domain C4J89_RS20915 PF02075 Crossover junction endodeoxyribonuclease RuvC C4J89_RS20920 PF01709 Transcriptional regulator C4J89_RS20925 PF01336 OB-fold nucleic acid binding domain C4J89_RS20925 PF02938 GAD domain C4J89_RS20925 PF00152 tRNA synthetases class II (D, K and N) C4J89_RS20940 PF00210 Ferritin-like domain C4J89_RS20945 PF00313 'Cold-shock' DNA-binding domain C4J89_RS20950 PF04102 SlyX C4J89_RS20960 PF03573 outer membrane porin, OprD family C4J89_RS20965 PF00924 Mechanosensitive ion channel C4J89_RS20965 PF05552 Conserved TM helix C4J89_RS20970 PF04461 Protein of unknown function (DUF520) C4J89_RS20975 PF02558 Ketopantoate reductase PanE/ApbA C4J89_RS20975 PF08546 Ketopantoate reductase PanE/ApbA C terminal C4J89_RS20980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS20980 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS20980 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS20985 PF01923 Cobalamin adenosyltransferase C4J89_RS20995 PF00293 NUDIX domain C4J89_RS21000 PF01960 ArgJ family C4J89_RS21005 PF07517 SecA DEAD-like domain C4J89_RS21005 PF01043 SecA preprotein cross-linking domain C4J89_RS21005 PF07516 SecA Wing and Scaffold domain C4J89_RS21005 PF02810 SEC-C motif C4J89_RS21015 PF05872 Bacterial protein of unknown function (DUF853) C4J89_RS21020 PF00672 HAMP domain C4J89_RS21020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS21020 PF02743 Cache domain C4J89_RS21025 PF00534 Glycosyl transferases group 1 C4J89_RS21025 PF13439 Glycosyltransferase Family 4 C4J89_RS21040 PF01842 ACT domain C4J89_RS21040 PF00551 Formyl transferase C4J89_RS21050 PF00929 Exonuclease C4J89_RS21050 PF08411 Exonuclease C-terminal C4J89_RS21075 PF07726 ATPase family associated with various cellular activities (AAA) C4J89_RS21075 PF17863 AAA lid domain C4J89_RS21095 PF02887 Pyruvate kinase, alpha/beta domain C4J89_RS21095 PF00224 Pyruvate kinase, barrel domain C4J89_RS21100 PF00175 Oxidoreductase NAD-binding domain C4J89_RS21100 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J89_RS21100 PF00970 Oxidoreductase FAD-binding domain C4J89_RS21105 PF05683 Fumarase C-terminus C4J89_RS21105 PF05681 Fumarate hydratase (Fumerase) C4J89_RS21115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS21115 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS21120 PF02954 Bacterial regulatory protein, Fis family C4J89_RS21120 PF00072 Response regulator receiver domain C4J89_RS21120 PF00158 Sigma-54 interaction domain C4J89_RS21125 PF00083 Sugar (and other) transporter C4J89_RS21150 PF12833 Helix-turn-helix domain C4J89_RS21150 PF06719 AraC-type transcriptional regulator N-terminus C4J89_RS21155 PF00672 HAMP domain C4J89_RS21155 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS21155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS21160 PF00072 Response regulator receiver domain C4J89_RS21160 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS21165 PF02685 Glucokinase C4J89_RS21170 PF00920 Dehydratase family C4J89_RS21175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4J89_RS21175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4J89_RS21180 PF04542 Sigma-70 region 2 C4J89_RS21180 PF08281 Sigma-70, region 4 C4J89_RS21190 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS21190 PF00593 TonB dependent receptor C4J89_RS21195 PF01126 Heme oxygenase C4J89_RS21200 PF04304 Protein of unknown function (DUF454) C4J89_RS21205 PF00672 HAMP domain C4J89_RS21205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS21245 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS21245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS21245 PF00672 HAMP domain C4J89_RS21250 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS21250 PF00072 Response regulator receiver domain C4J89_RS21255 PF00884 Sulfatase C4J89_RS21265 PF00118 TCP-1/cpn60 chaperonin family C4J89_RS21270 PF00166 Chaperonin 10 Kd subunit C4J89_RS21275 PF04186 FxsA cytoplasmic membrane protein C4J89_RS21295 PF07690 Major Facilitator Superfamily C4J89_RS21300 PF04073 Aminoacyl-tRNA editing domain C4J89_RS21300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4J89_RS21300 PF03129 Anticodon binding domain C4J89_RS21310 PF00817 impB/mucB/samB family C4J89_RS21310 PF11798 IMS family HHH motif C4J89_RS21325 PF09924 Uncharacterised conserved protein (DUF2156) C4J89_RS21325 PF03706 Lysylphosphatidylglycerol synthase TM region C4J89_RS21335 PF02272 DHHA1 domain C4J89_RS21335 PF17768 RecJ OB domain C4J89_RS21335 PF01368 DHH family C4J89_RS21340 PF07152 YaeQ protein C4J89_RS21355 PF14821 Threonine synthase N terminus C4J89_RS21355 PF00291 Pyridoxal-phosphate dependent enzyme C4J89_RS21360 PF01842 ACT domain C4J89_RS21360 PF00742 Homoserine dehydrogenase C4J89_RS21360 PF03447 Homoserine dehydrogenase, NAD binding domain C4J89_RS21365 PF10411 Disulfide bond isomerase protein N-terminus C4J89_RS21365 PF13098 Thioredoxin-like domain C4J89_RS21370 PF00589 Phage integrase family C4J89_RS21370 PF02899 Phage integrase, N-terminal SAM-like domain C4J89_RS21375 PF01245 Ribosomal protein L19 C4J89_RS21380 PF01746 tRNA (Guanine-1)-methyltransferase C4J89_RS21385 PF01782 RimM N-terminal domain C4J89_RS21385 PF05239 PRC-barrel domain C4J89_RS21390 PF00886 Ribosomal protein S16 C4J89_RS21395 PF02978 Signal peptide binding domain C4J89_RS21395 PF02881 SRP54-type protein, helical bundle domain C4J89_RS21395 PF00448 SRP54-type protein, GTPase domain C4J89_RS21405 PF01595 Cyclin M transmembrane N-terminal domain C4J89_RS21405 PF03471 Transporter associated domain C4J89_RS21405 PF00571 CBS domain C4J89_RS21410 PF00083 Sugar (and other) transporter C4J89_RS21410 PF07690 Major Facilitator Superfamily C4J89_RS21420 PF02222 ATP-grasp domain C4J89_RS21435 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS21440 PF00293 NUDIX domain C4J89_RS21445 PF09297 NADH pyrophosphatase zinc ribbon domain C4J89_RS21445 PF00293 NUDIX domain C4J89_RS21455 PF07702 UTRA domain C4J89_RS21455 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS21460 PF01979 Amidohydrolase family C4J89_RS21465 PF01380 SIS domain C4J89_RS21470 PF05524 PEP-utilising enzyme, N-terminal C4J89_RS21470 PF00381 PTS HPr component phosphorylation site C4J89_RS21470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C4J89_RS21470 PF00391 PEP-utilising enzyme, mobile domain C4J89_RS21470 PF02896 PEP-utilising enzyme, TIM barrel domain C4J89_RS21475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C4J89_RS21475 PF00367 phosphotransferase system, EIIB C4J89_RS21475 PF02378 Phosphotransferase system, EIIC C4J89_RS21490 PF01784 NIF3 (NGG1p interacting factor 3) C4J89_RS21495 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C4J89_RS21495 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C4J89_RS21495 PF02769 AIR synthase related protein, C-terminal domain C4J89_RS21500 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS21500 PF01464 Transglycosylase SLT domain C4J89_RS21515 PF01381 Helix-turn-helix C4J89_RS21525 PF00117 Glutamine amidotransferase class-I C4J89_RS21525 PF02540 NAD synthase C4J89_RS21525 PF00958 GMP synthase C terminal domain C4J89_RS21530 PF00478 IMP dehydrogenase / GMP reductase domain C4J89_RS21530 PF00571 CBS domain C4J89_RS21545 PF13742 OB-fold nucleic acid binding domain C4J89_RS21545 PF02601 Exonuclease VII, large subunit C4J89_RS21550 PF08525 Opacity-associated protein A N-terminal motif C4J89_RS21550 PF01476 LysM domain C4J89_RS21550 PF01551 Peptidase family M23 C4J89_RS21560 PF08502 LeuA allosteric (dimerisation) domain C4J89_RS21560 PF00682 HMGL-like C4J89_RS21565 PF00795 Carbon-nitrogen hydrolase C4J89_RS21570 PF00155 Aminotransferase class I and II C4J89_RS21575 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C4J89_RS21575 PF01926 50S ribosome-binding GTPase C4J89_RS21580 PF13360 PQQ-like domain C4J89_RS21590 PF13393 Histidyl-tRNA synthetase C4J89_RS21590 PF03129 Anticodon binding domain C4J89_RS21595 PF04551 GcpE protein C4J89_RS21600 PF13464 Domain of unknown function (DUF4115) C4J89_RS21610 PF04055 Radical SAM superfamily C4J89_RS21615 PF00334 Nucleoside diphosphate kinase C4J89_RS21620 PF04384 Iron-sulphur cluster assembly C4J89_RS21625 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J89_RS21630 PF00012 Hsp70 protein C4J89_RS21635 PF07743 HSCB C-terminal oligomerisation domain C4J89_RS21635 PF00226 DnaJ domain C4J89_RS21640 PF01521 Iron-sulphur cluster biosynthesis C4J89_RS21645 PF01592 NifU-like N terminal domain C4J89_RS21650 PF00266 Aminotransferase class-V C4J89_RS21655 PF02082 Transcriptional regulator C4J89_RS21660 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS21665 PF00588 SpoU rRNA Methylase family C4J89_RS21670 PF00459 Inositol monophosphatase family C4J89_RS21675 PF05433 Glycine zipper 2TM domain C4J89_RS21680 PF07549 SecD/SecF GG Motif C4J89_RS21680 PF02355 Protein export membrane protein C4J89_RS21685 PF07549 SecD/SecF GG Motif C4J89_RS21685 PF13721 SecD export protein N-terminal TM region C4J89_RS21685 PF02355 Protein export membrane protein C4J89_RS21690 PF02699 Preprotein translocase subunit C4J89_RS21695 PF01702 Queuine tRNA-ribosyltransferase C4J89_RS21700 PF02547 Queuosine biosynthesis protein C4J89_RS21720 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C4J89_RS21745 PF01810 LysE type translocator C4J89_RS21755 PF01037 Lrp/AsnC ligand binding domain C4J89_RS21765 PF00464 Serine hydroxymethyltransferase C4J89_RS21780 PF01810 LysE type translocator C4J89_RS21785 PF08000 Bacterial PH domain C4J89_RS21790 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 C4J89_RS21790 PF03515 Colicin-like bacteriocin tRNase domain C4J89_RS21790 PF09000 Cytotoxic C4J89_RS21795 PF03513 Cloacin immunity protein C4J89_RS21805 PF00034 Cytochrome c C4J89_RS21820 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS21820 PF08446 PAS fold C4J89_RS21820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS21820 PF00360 Phytochrome region C4J89_RS21820 PF01590 GAF domain C4J89_RS21825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS21825 PF00672 HAMP domain C4J89_RS21825 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS21830 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS21830 PF00072 Response regulator receiver domain C4J89_RS21835 PF04333 MlaA lipoprotein C4J89_RS21850 PF08448 PAS fold C4J89_RS21850 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS21855 PF00202 Aminotransferase class-III C4J89_RS21865 PF00266 Aminotransferase class-V C4J89_RS21890 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS21890 PF03472 Autoinducer binding domain C4J89_RS21895 PF00155 Aminotransferase class I and II C4J89_RS21900 PF06508 Queuosine biosynthesis protein QueC C4J89_RS21905 PF01040 UbiA prenyltransferase family C4J89_RS21910 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C4J89_RS21915 PF00510 Cytochrome c oxidase subunit III C4J89_RS21920 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J89_RS21925 PF06481 COX Aromatic Rich Motif C4J89_RS21925 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4J89_RS21935 PF02600 Disulfide bond formation protein DsbB C4J89_RS21940 PF00970 Oxidoreductase FAD-binding domain C4J89_RS21940 PF00175 Oxidoreductase NAD-binding domain C4J89_RS21940 PF00042 Globin C4J89_RS21945 PF00158 Sigma-54 interaction domain C4J89_RS21945 PF01590 GAF domain C4J89_RS21955 PF06445 GyrI-like small molecule binding domain C4J89_RS21955 PF12833 Helix-turn-helix domain C4J89_RS21960 PF00072 Response regulator receiver domain C4J89_RS21960 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS21965 PF07044 Protein of unknown function (DUF1329) C4J89_RS21975 PF00106 short chain dehydrogenase C4J89_RS21980 PF00561 alpha/beta hydrolase fold C4J89_RS21985 PF00596 Class II Aldolase and Adducin N-terminal domain C4J89_RS21990 PF00258 Flavodoxin C4J89_RS21995 PF13426 PAS domain C4J89_RS21995 PF01740 STAS domain C4J89_RS22005 PF13411 MerR HTH family regulatory protein C4J89_RS22020 PF01227 GTP cyclohydrolase I C4J89_RS22025 PF02152 Dihydroneopterin aldolase C4J89_RS22040 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS22055 PF13439 Glycosyltransferase Family 4 C4J89_RS22055 PF00534 Glycosyl transferases group 1 C4J89_RS22060 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS22060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J89_RS22065 PF00255 Glutathione peroxidase C4J89_RS22070 PF05981 CreA protein C4J89_RS22075 PF00696 Amino acid kinase family C4J89_RS22075 PF01472 PUA domain C4J89_RS22080 PF01926 50S ribosome-binding GTPase C4J89_RS22080 PF01018 GTP1/OBG C4J89_RS22085 PF01016 Ribosomal L27 protein C4J89_RS22090 PF00829 Ribosomal prokaryotic L21 protein C4J89_RS22095 PF00348 Polyprenyl synthetase C4J89_RS22100 PF03831 PhnA domain C4J89_RS22100 PF08274 PhnA Zinc-Ribbon C4J89_RS22105 PF12804 MobA-like NTP transferase domain C4J89_RS22105 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS22110 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J89_RS22110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J89_RS22115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS22115 PF16591 Helical bimodular sensor domain C4J89_RS22115 PF00672 HAMP domain C4J89_RS22125 PF07969 Amidohydrolase family C4J89_RS22130 PF01380 SIS domain C4J89_RS22135 PF02447 GntP family permease C4J89_RS22145 PF01740 STAS domain C4J89_RS22145 PF00916 Sulfate permease family C4J89_RS22155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS22155 PF03466 LysR substrate binding domain C4J89_RS22165 PF03466 LysR substrate binding domain C4J89_RS22165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS22170 PF00324 Amino acid permease C4J89_RS22175 PF00266 Aminotransferase class-V C4J89_RS22180 PF01037 Lrp/AsnC ligand binding domain C4J89_RS22185 PF00775 Dioxygenase C4J89_RS22185 PF04444 Catechol dioxygenase N terminus C4J89_RS22190 PF02426 Muconolactone delta-isomerase C4J89_RS22195 PF13378 Enolase C-terminal domain-like C4J89_RS22195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J89_RS22200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS22200 PF03466 LysR substrate binding domain C4J89_RS22205 PF12833 Helix-turn-helix domain C4J89_RS22205 PF14525 AraC-binding-like domain C4J89_RS22210 PF00355 Rieske [2Fe-2S] domain C4J89_RS22210 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4J89_RS22215 PF00866 Ring hydroxylating beta subunit C4J89_RS22220 PF00175 Oxidoreductase NAD-binding domain C4J89_RS22220 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J89_RS22220 PF00970 Oxidoreductase FAD-binding domain C4J89_RS22225 PF00324 Amino acid permease C4J89_RS22230 PF03301 Tryptophan 2,3-dioxygenase C4J89_RS22235 PF04199 Putative cyclase C4J89_RS22250 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C4J89_RS22250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4J89_RS22255 PF00171 Aldehyde dehydrogenase family C4J89_RS22260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS22260 PF03466 LysR substrate binding domain C4J89_RS22270 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS22270 PF00563 EAL domain C4J89_RS22270 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS22280 PF13538 UvrD-like helicase C-terminal domain C4J89_RS22285 PF12705 PD-(D/E)XK nuclease superfamily C4J89_RS22285 PF00580 UvrD/REP helicase N-terminal domain C4J89_RS22285 PF13361 UvrD-like helicase C-terminal domain C4J89_RS22290 PF17946 RecC C-terminal domain C4J89_RS22325 PF01794 Ferric reductase like transmembrane component C4J89_RS22330 PF00174 Oxidoreductase molybdopterin binding domain C4J89_RS22335 PF01066 CDP-alcohol phosphatidyltransferase C4J89_RS22340 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C4J89_RS22340 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C4J89_RS22345 PF10369 Small subunit of acetolactate synthase C4J89_RS22350 PF00205 Thiamine pyrophosphate enzyme, central domain C4J89_RS22350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J89_RS22350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J89_RS22355 PF04287 tRNA pseudouridine synthase C C4J89_RS22365 PF14814 Bifunctional transglycosylase second domain C4J89_RS22365 PF00905 Penicillin binding protein transpeptidase domain C4J89_RS22365 PF00912 Transglycosylase C4J89_RS22385 PF00005 ABC transporter C4J89_RS22390 PF01032 FecCD transport family C4J89_RS22395 PF01497 Periplasmic binding protein C4J89_RS22405 PF03749 Sugar fermentation stimulation protein RE domain C4J89_RS22405 PF17746 SfsA N-terminal OB domain C4J89_RS22410 PF00155 Aminotransferase class I and II C4J89_RS22415 PF01258 Prokaryotic dksA/traR C4-type zinc finger C4J89_RS22420 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4J89_RS22430 PF00989 PAS fold C4J89_RS22430 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS22430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS22430 PF08447 PAS fold C4J89_RS22435 PF00072 Response regulator receiver domain C4J89_RS22435 PF02954 Bacterial regulatory protein, Fis family C4J89_RS22435 PF00158 Sigma-54 interaction domain C4J89_RS22440 PF01743 Poly A polymerase head domain C4J89_RS22440 PF12626 Polymerase A arginine-rich C-terminus C4J89_RS22440 PF12627 Probable RNA and SrmB- binding site of polymerase A C4J89_RS22445 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C4J89_RS22450 PF02548 Ketopantoate hydroxymethyltransferase C4J89_RS22455 PF02569 Pantoate-beta-alanine ligase C4J89_RS22460 PF00342 Phosphoglucose isomerase C4J89_RS22465 PF00501 AMP-binding enzyme C4J89_RS22465 PF16177 Acetyl-coenzyme A synthetase N-terminus C4J89_RS22465 PF13193 AMP-binding enzyme C-terminal domain C4J89_RS22470 PF10672 S-adenosylmethionine-dependent methyltransferase C4J89_RS22470 PF17785 PUA-like domain C4J89_RS22480 PF04972 BON domain C4J89_RS22485 PF00575 S1 RNA binding domain C4J89_RS22485 PF03725 3' exoribonuclease family, domain 2 C4J89_RS22485 PF00013 KH domain C4J89_RS22485 PF01138 3' exoribonuclease family, domain 1 C4J89_RS22485 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C4J89_RS22490 PF00312 Ribosomal protein S15 C4J89_RS22495 PF09157 Pseudouridine synthase II TruB, C-terminal C4J89_RS22495 PF01509 TruB family pseudouridylate synthase (N terminal domain) C4J89_RS22495 PF16198 tRNA pseudouridylate synthase B C-terminal domain C4J89_RS22500 PF02033 Ribosome-binding factor A C4J89_RS22505 PF04760 Translation initiation factor IF-2, N-terminal region C4J89_RS22505 PF08364 Bacterial translation initiation factor IF-2 associated region C4J89_RS22505 PF11987 Translation-initiation factor 2 C4J89_RS22505 PF00009 Elongation factor Tu GTP binding domain C4J89_RS22510 PF00575 S1 RNA binding domain C4J89_RS22510 PF13184 NusA-like KH domain C4J89_RS22510 PF08529 NusA N-terminal domain C4J89_RS22515 PF17384 RimP C-terminal SH3 domain C4J89_RS22515 PF02576 RimP N-terminal domain C4J89_RS22530 PF03840 Preprotein translocase SecG subunit C4J89_RS22535 PF00121 Triosephosphate isomerase C4J89_RS22540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4J89_RS22540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4J89_RS22540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4J89_RS22540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4J89_RS22545 PF00809 Pterin binding enzyme C4J89_RS22550 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS22550 PF17862 AAA+ lid domain C4J89_RS22550 PF06480 FtsH Extracellular C4J89_RS22550 PF01434 Peptidase family M41 C4J89_RS22555 PF01728 FtsJ-like methyltransferase C4J89_RS22560 PF01985 CRS1 / YhbY (CRM) domain C4J89_RS22570 PF03449 Transcription elongation factor, N-terminal C4J89_RS22570 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J89_RS22575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J89_RS22575 PF02142 MGS-like domain C4J89_RS22575 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C4J89_RS22580 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C4J89_RS22580 PF00117 Glutamine amidotransferase class-I C4J89_RS22585 PF01113 Dihydrodipicolinate reductase, N-terminus C4J89_RS22585 PF05173 Dihydrodipicolinate reductase, C-terminus C4J89_RS22590 PF00226 DnaJ domain C4J89_RS22590 PF01556 DnaJ C terminal domain C4J89_RS22590 PF00684 DnaJ central domain C4J89_RS22595 PF00012 Hsp70 protein C4J89_RS22600 PF01025 GrpE C4J89_RS22605 PF02463 RecF/RecN/SMC N terminal domain C4J89_RS22610 PF01475 Ferric uptake regulator family C4J89_RS22615 PF04355 SmpA / OmlA family C4J89_RS22620 PF03658 RnfH family Ubiquitin C4J89_RS22625 PF03364 Polyketide cyclase / dehydrase and lipid transport C4J89_RS22630 PF01668 SmpB protein C4J89_RS22635 PF07729 FCD domain C4J89_RS22635 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS22640 PF02652 L-lactate permease C4J89_RS22660 PF00589 Phage integrase family C4J89_RS22660 PF13356 Arm DNA-binding domain C4J89_RS22680 PF13148 Protein of unknown function (DUF3987) C4J89_RS22780 PF06463 Molybdenum Cofactor Synthesis C C4J89_RS22780 PF04055 Radical SAM superfamily C4J89_RS22785 PF01062 Bestrophin, RFP-TM, chloride channel C4J89_RS22790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS22790 PF03466 LysR substrate binding domain C4J89_RS22800 PF03350 Uncharacterized protein family, UPF0114 C4J89_RS22815 PF05362 Lon protease (S16) C-terminal proteolytic domain C4J89_RS22815 PF13654 AAA domain C4J89_RS22835 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J89_RS22835 PF03449 Transcription elongation factor, N-terminal C4J89_RS22840 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C4J89_RS22840 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C4J89_RS22855 PF00155 Aminotransferase class I and II C4J89_RS22870 PF07690 Major Facilitator Superfamily C4J89_RS22875 PF03466 LysR substrate binding domain C4J89_RS22875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS22880 PF12848 ABC transporter C4J89_RS22880 PF00005 ABC transporter C4J89_RS22885 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS22885 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS22885 PF00563 EAL domain C4J89_RS22890 PF00464 Serine hydroxymethyltransferase C4J89_RS22895 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J89_RS22895 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J89_RS22900 PF04328 Selenoprotein, putative C4J89_RS22905 PF02554 Carbon starvation protein CstA C4J89_RS22905 PF13722 5TM C-terminal transporter carbon starvation CstA C4J89_RS22910 PF18073 Rubredoxin metal binding domain C4J89_RS22920 PF00199 Catalase C4J89_RS22920 PF06628 Catalase-related immune-responsive C4J89_RS22925 PF01741 Large-conductance mechanosensitive channel, MscL C4J89_RS22930 PF00970 Oxidoreductase FAD-binding domain C4J89_RS22930 PF00175 Oxidoreductase NAD-binding domain C4J89_RS22935 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS22935 PF03472 Autoinducer binding domain C4J89_RS22940 PF05175 Methyltransferase small domain C4J89_RS22950 PF02322 Cytochrome bd terminal oxidase subunit II C4J89_RS22955 PF01654 Cytochrome bd terminal oxidase subunit I C4J89_RS22965 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C4J89_RS22965 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J89_RS22970 PF00941 FAD binding domain in molybdopterin dehydrogenase C4J89_RS22970 PF03450 CO dehydrogenase flavoprotein C-terminal domain C4J89_RS22975 PF10518 TAT (twin-arginine translocation) pathway signal sequence C4J89_RS22975 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J89_RS22975 PF01799 [2Fe-2S] binding domain C4J89_RS22985 PF00860 Permease family C4J89_RS22990 PF05958 tRNA (Uracil-5-)-methyltransferase C4J89_RS23005 PF01220 Dehydroquinase class II C4J89_RS23010 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C4J89_RS23010 PF08501 Shikimate dehydrogenase substrate binding domain C4J89_RS23015 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS23015 PF17938 Tetracyclin repressor-like, C-terminal domain C4J89_RS23020 PF01261 Xylose isomerase-like TIM barrel C4J89_RS23020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J89_RS23025 PF07690 Major Facilitator Superfamily C4J89_RS23040 PF04228 Putative neutral zinc metallopeptidase C4J89_RS23060 PF13302 Acetyltransferase (GNAT) domain C4J89_RS23065 PF00850 Histone deacetylase domain C4J89_RS23070 PF13247 4Fe-4S dicluster domain C4J89_RS23070 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS23070 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4J89_RS23075 PF00270 DEAD/DEAH box helicase C4J89_RS23075 PF00271 Helicase conserved C-terminal domain C4J89_RS23080 PF00892 EamA-like transporter family C4J89_RS23100 PF04851 Type III restriction enzyme, res subunit C4J89_RS23100 PF00929 Exonuclease C4J89_RS23100 PF13307 Helicase C-terminal domain C4J89_RS23110 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) C4J89_RS23125 PF01261 Xylose isomerase-like TIM barrel C4J89_RS23140 PF04408 Helicase associated domain (HA2) C4J89_RS23140 PF00270 DEAD/DEAH box helicase C4J89_RS23140 PF00271 Helicase conserved C-terminal domain C4J89_RS23140 PF08482 ATP-dependent helicase C-terminal C4J89_RS23155 PF16916 Dimerisation domain of Zinc Transporter C4J89_RS23155 PF01545 Cation efflux family C4J89_RS23165 PF01037 Lrp/AsnC ligand binding domain C4J89_RS23175 PF00849 RNA pseudouridylate synthase C4J89_RS23180 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus C4J89_RS23180 PF01048 Phosphorylase superfamily C4J89_RS23185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS23185 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS23185 PF18158 Adaptive response protein AidB N-terminal domain C4J89_RS23190 PF00672 HAMP domain C4J89_RS23190 PF00072 Response regulator receiver domain C4J89_RS23190 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS23190 PF17149 Periplasmic sensor domain found in signal transduction proteins C4J89_RS23190 PF01627 Hpt domain C4J89_RS23190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS23195 PF08543 Phosphomethylpyrimidine kinase C4J89_RS23200 PF02581 Thiamine monophosphate synthase C4J89_RS23205 PF00202 Aminotransferase class-III C4J89_RS23220 PF01938 TRAM domain C4J89_RS23220 PF04055 Radical SAM superfamily C4J89_RS23220 PF00919 Uncharacterized protein family UPF0004 C4J89_RS23225 PF02562 PhoH-like protein C4J89_RS23230 PF02130 Uncharacterized protein family UPF0054 C4J89_RS23235 PF00571 CBS domain C4J89_RS23235 PF03471 Transporter associated domain C4J89_RS23240 PF00795 Carbon-nitrogen hydrolase C4J89_RS23255 PF09334 tRNA synthetases class I (M) C4J89_RS23255 PF13603 Leucyl-tRNA synthetase, Domain 2 C4J89_RS23255 PF08264 Anticodon-binding domain of tRNA C4J89_RS23255 PF00133 tRNA synthetases class I (I, L, M and V) C4J89_RS23265 PF06144 DNA polymerase III, delta subunit C4J89_RS23265 PF14840 Processivity clamp loader gamma complex DNA pol III C-term C4J89_RS23275 PF13406 Transglycosylase SLT domain C4J89_RS23280 PF02016 LD-carboxypeptidase N-terminal domain C4J89_RS23280 PF17676 LD-carboxypeptidase C-terminal domain C4J89_RS23285 PF04055 Radical SAM superfamily C4J89_RS23285 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C4J89_RS23290 PF03099 Biotin/lipoate A/B protein ligase family C4J89_RS23295 PF04359 Protein of unknown function (DUF493) C4J89_RS23300 PF00768 D-alanyl-D-alanine carboxypeptidase C4J89_RS23300 PF07943 Penicillin-binding protein 5, C-terminal domain C4J89_RS23305 PF03330 Lytic transglycolase C4J89_RS23305 PF05036 Sporulation related domain C4J89_RS23310 PF13406 Transglycosylase SLT domain C4J89_RS23315 PF01098 Cell cycle protein C4J89_RS23320 PF03717 Penicillin-binding Protein dimerisation domain C4J89_RS23320 PF00905 Penicillin binding protein transpeptidase domain C4J89_RS23325 PF02590 Predicted SPOUT methyltransferase C4J89_RS23335 PF01467 Cytidylyltransferase-like C4J89_RS23340 PF00171 Aldehyde dehydrogenase family C4J89_RS23345 PF02245 Methylpurine-DNA glycosylase (MPG) C4J89_RS23350 PF09335 SNARE associated Golgi protein C4J89_RS23360 PF04172 LrgB-like family C4J89_RS23365 PF03788 LrgA family C4J89_RS23370 PF01575 MaoC like domain C4J89_RS23380 PF13460 NAD(P)H-binding C4J89_RS23390 PF02441 Flavoprotein C4J89_RS23395 PF01225 Mur ligase family, catalytic domain C4J89_RS23395 PF08245 Mur ligase middle domain C4J89_RS23395 PF02875 Mur ligase family, glutamate ligase domain C4J89_RS23400 PF01590 GAF domain C4J89_RS23400 PF02954 Bacterial regulatory protein, Fis family C4J89_RS23400 PF00158 Sigma-54 interaction domain C4J89_RS23405 PF00171 Aldehyde dehydrogenase family C4J89_RS23410 PF13520 Amino acid permease C4J89_RS23415 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C4J89_RS23420 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C4J89_RS23425 PF00583 Acetyltransferase (GNAT) family C4J89_RS23430 PF09335 SNARE associated Golgi protein C4J89_RS23435 PF06167 Glucose-regulated metallo-peptidase M90 C4J89_RS23440 PF00719 Inorganic pyrophosphatase C4J89_RS23445 PF00717 Peptidase S24-like C4J89_RS23445 PF01381 Helix-turn-helix C4J89_RS23460 PF00857 Isochorismatase family C4J89_RS23465 PF17761 DUF1016 N-terminal domain C4J89_RS23465 PF06250 YhcG PDDEXK nuclease domain C4J89_RS23470 PF02609 Exonuclease VII small subunit C4J89_RS23475 PF00348 Polyprenyl synthetase C4J89_RS23480 PF02780 Transketolase, C-terminal domain C4J89_RS23480 PF02779 Transketolase, pyrimidine binding domain C4J89_RS23480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C4J89_RS23485 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS23485 PF00593 TonB dependent receptor C4J89_RS23490 PF01497 Periplasmic binding protein C4J89_RS23500 PF00925 GTP cyclohydrolase II C4J89_RS23510 PF00586 AIR synthase related protein, N-terminal domain C4J89_RS23510 PF02769 AIR synthase related protein, C-terminal domain C4J89_RS23515 PF01029 NusB family C4J89_RS23520 PF00885 6,7-dimethyl-8-ribityllumazine synthase C4J89_RS23525 PF00925 GTP cyclohydrolase II C4J89_RS23525 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C4J89_RS23530 PF00677 Lumazine binding domain C4J89_RS23535 PF01872 RibD C-terminal domain C4J89_RS23535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C4J89_RS23540 PF03477 ATP cone domain C4J89_RS23555 PF00085 Thioredoxin C4J89_RS23570 PF00005 ABC transporter C4J89_RS23595 PF00271 Helicase conserved C-terminal domain C4J89_RS23595 PF08494 DEAD/H associated C4J89_RS23595 PF00270 DEAD/DEAH box helicase C4J89_RS23600 PF00924 Mechanosensitive ion channel C4J89_RS23610 PF03372 Endonuclease/Exonuclease/phosphatase family C4J89_RS23615 PF13091 PLD-like domain C4J89_RS23620 PF03706 Lysylphosphatidylglycerol synthase TM region C4J89_RS23635 PF00857 Isochorismatase family C4J89_RS23645 PF00436 Single-strand binding protein family C4J89_RS23650 PF07690 Major Facilitator Superfamily C4J89_RS23655 PF17760 UvrA interaction domain C4J89_RS23655 PF17755 UvrA DNA-binding domain C4J89_RS23660 PF00210 Ferritin-like domain C4J89_RS23665 PF00199 Catalase C4J89_RS23665 PF06628 Catalase-related immune-responsive C4J89_RS23670 PF01196 Ribosomal protein L17 C4J89_RS23675 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C4J89_RS23675 PF01000 RNA polymerase Rpb3/RpoA insert domain C4J89_RS23675 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C4J89_RS23680 PF01479 S4 domain C4J89_RS23680 PF00163 Ribosomal protein S4/S9 N-terminal domain C4J89_RS23685 PF00411 Ribosomal protein S11 C4J89_RS23690 PF00416 Ribosomal protein S13/S18 C4J89_RS23695 PF00444 Ribosomal protein L36 C4J89_RS23700 PF00344 SecY translocase C4J89_RS23705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C4J89_RS23710 PF00327 Ribosomal protein L30p/L7e C4J89_RS23715 PF03719 Ribosomal protein S5, C-terminal domain C4J89_RS23715 PF00333 Ribosomal protein S5, N-terminal domain C4J89_RS23720 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C4J89_RS23725 PF00347 Ribosomal protein L6 C4J89_RS23730 PF00410 Ribosomal protein S8 C4J89_RS23735 PF00253 Ribosomal protein S14p/S29e C4J89_RS23740 PF00673 ribosomal L5P family C-terminus C4J89_RS23740 PF00281 Ribosomal protein L5 C4J89_RS23745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C4J89_RS23745 PF00467 KOW motif C4J89_RS23750 PF00238 Ribosomal protein L14p/L23e C4J89_RS23755 PF00366 Ribosomal protein S17 C4J89_RS23760 PF00831 Ribosomal L29 protein C4J89_RS23765 PF00252 Ribosomal protein L16p/L10e C4J89_RS23770 PF07650 KH domain C4J89_RS23770 PF00189 Ribosomal protein S3, C-terminal domain C4J89_RS23775 PF00237 Ribosomal protein L22p/L17e C4J89_RS23780 PF00203 Ribosomal protein S19 C4J89_RS23785 PF03947 Ribosomal Proteins L2, C-terminal domain C4J89_RS23785 PF00181 Ribosomal Proteins L2, RNA binding domain C4J89_RS23790 PF00276 Ribosomal protein L23 C4J89_RS23795 PF00573 Ribosomal protein L4/L1 family C4J89_RS23800 PF00297 Ribosomal protein L3 C4J89_RS23805 PF00338 Ribosomal protein S10p/S20e C4J89_RS23810 PF00009 Elongation factor Tu GTP binding domain C4J89_RS23810 PF03144 Elongation factor Tu domain 2 C4J89_RS23810 PF03143 Elongation factor Tu C-terminal domain C4J89_RS23815 PF03764 Elongation factor G, domain IV C4J89_RS23815 PF03144 Elongation factor Tu domain 2 C4J89_RS23815 PF14492 Elongation Factor G, domain II C4J89_RS23815 PF00009 Elongation factor Tu GTP binding domain C4J89_RS23815 PF00679 Elongation factor G C-terminus C4J89_RS23820 PF00177 Ribosomal protein S7p/S5e C4J89_RS23825 PF00164 Ribosomal protein S12/S23 C4J89_RS23830 PF04997 RNA polymerase Rpb1, domain 1 C4J89_RS23830 PF04998 RNA polymerase Rpb1, domain 5 C4J89_RS23830 PF05000 RNA polymerase Rpb1, domain 4 C4J89_RS23830 PF00623 RNA polymerase Rpb1, domain 2 C4J89_RS23830 PF04983 RNA polymerase Rpb1, domain 3 C4J89_RS23835 PF04563 RNA polymerase beta subunit C4J89_RS23835 PF04560 RNA polymerase Rpb2, domain 7 C4J89_RS23835 PF00562 RNA polymerase Rpb2, domain 6 C4J89_RS23835 PF10385 RNA polymerase beta subunit external 1 domain C4J89_RS23835 PF04565 RNA polymerase Rpb2, domain 3 C4J89_RS23835 PF04561 RNA polymerase Rpb2, domain 2 C4J89_RS23840 PF16320 Ribosomal protein L7/L12 dimerisation domain C4J89_RS23840 PF00542 Ribosomal protein L7/L12 C-terminal domain C4J89_RS23845 PF00466 Ribosomal protein L10 C4J89_RS23850 PF00687 Ribosomal protein L1p/L10e family C4J89_RS23855 PF00298 Ribosomal protein L11, RNA binding domain C4J89_RS23855 PF03946 Ribosomal protein L11, N-terminal domain C4J89_RS23860 PF00467 KOW motif C4J89_RS23860 PF02357 Transcription termination factor nusG C4J89_RS23865 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C4J89_RS23895 PF03309 Type III pantothenate kinase C4J89_RS23900 PF02237 Biotin protein ligase C terminal domain C4J89_RS23900 PF03099 Biotin/lipoate A/B protein ligase family C4J89_RS23900 PF08279 HTH domain C4J89_RS23935 PF00579 tRNA synthetases class I (W and Y) C4J89_RS23935 PF01479 S4 domain C4J89_RS23945 PF04225 Opacity-associated protein A LysM-like domain C4J89_RS23945 PF01551 Peptidase family M23 C4J89_RS23950 PF03702 Anhydro-N-acetylmuramic acid kinase C4J89_RS23955 PF01521 Iron-sulphur cluster biosynthesis C4J89_RS23960 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4J89_RS23960 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4J89_RS23965 PF03653 Uncharacterised protein family (UPF0093) C4J89_RS23980 PF00106 short chain dehydrogenase C4J89_RS23985 PF01230 HIT domain C4J89_RS23990 PF03232 Ubiquinone biosynthesis protein COQ7 C4J89_RS23995 PF02566 OsmC-like protein C4J89_RS24000 PF13545 Crp-like helix-turn-helix domain C4J89_RS24000 PF00027 Cyclic nucleotide-binding domain C4J89_RS24010 PF00218 Indole-3-glycerol phosphate synthase C4J89_RS24015 PF02885 Glycosyl transferase family, helical bundle domain C4J89_RS24015 PF00591 Glycosyl transferase family, a/b domain C4J89_RS24020 PF00117 Glutamine amidotransferase class-I C4J89_RS24025 PF00657 GDSL-like Lipase/Acylhydrolase C4J89_RS24025 PF03797 Autotransporter beta-domain C4J89_RS24030 PF00425 chorismate binding enzyme C4J89_RS24030 PF04715 Anthranilate synthase component I, N terminal region C4J89_RS24035 PF13419 Haloacid dehalogenase-like hydrolase C4J89_RS24040 PF00834 Ribulose-phosphate 3 epimerase family C4J89_RS24045 PF00465 Iron-containing alcohol dehydrogenase C4J89_RS24050 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS24055 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS24065 PF00005 ABC transporter C4J89_RS24065 PF08402 TOBE domain C4J89_RS24070 PF00196 Bacterial regulatory proteins, luxR family C4J89_RS24070 PF00072 Response regulator receiver domain C4J89_RS24075 PF07730 Histidine kinase C4J89_RS24075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS24075 PF05384 Sensor protein DegS C4J89_RS24085 PF00226 DnaJ domain C4J89_RS24085 PF05099 Tellurite resistance protein TerB C4J89_RS24090 PF00483 Nucleotidyl transferase C4J89_RS24095 PF01636 Phosphotransferase enzyme family C4J89_RS24100 PF03968 OstA-like protein C4J89_RS24100 PF04453 LPS transport system D C4J89_RS24105 PF00639 PPIC-type PPIASE domain C4J89_RS24105 PF09312 SurA N-terminal domain C4J89_RS24110 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C4J89_RS24115 PF00398 Ribosomal RNA adenine dimethylase C4J89_RS24125 PF04379 ApaG domain C4J89_RS24130 PF00149 Calcineurin-like phosphoesterase C4J89_RS24140 PF06798 PrkA serine protein kinase C-terminal domain C4J89_RS24140 PF08298 PrkA AAA domain C4J89_RS24145 PF04285 Protein of unknown function (DUF444) C4J89_RS24150 PF04293 SpoVR like protein C4J89_RS24155 PF12627 Probable RNA and SrmB- binding site of polymerase A C4J89_RS24155 PF01966 HD domain C4J89_RS24155 PF01743 Poly A polymerase head domain C4J89_RS24165 PF02152 Dihydroneopterin aldolase C4J89_RS24170 PF02660 Glycerol-3-phosphate acyltransferase C4J89_RS24175 PF00814 Glycoprotease family C4J89_RS24180 PF01165 Ribosomal protein S21 C4J89_RS24185 PF10410 DnaB-helicase binding domain of primase C4J89_RS24185 PF08278 DNA primase DnaG DnaB-binding C4J89_RS24185 PF13662 Toprim domain C4J89_RS24185 PF08275 DNA primase catalytic core, N-terminal domain C4J89_RS24185 PF01807 CHC2 zinc finger C4J89_RS24190 PF04545 Sigma-70, region 4 C4J89_RS24190 PF03979 Sigma-70 factor, region 1.1 C4J89_RS24190 PF04542 Sigma-70 region 2 C4J89_RS24190 PF04539 Sigma-70 region 3 C4J89_RS24190 PF00140 Sigma-70 factor, region 1.2 C4J89_RS24190 PF04546 Sigma-70, non-essential region C4J89_RS24195 PF00563 EAL domain C4J89_RS24195 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS24195 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS24220 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS24245 PF01593 Flavin containing amine oxidoreductase C4J89_RS24250 PF00795 Carbon-nitrogen hydrolase C4J89_RS24255 PF00675 Insulinase (Peptidase family M16) C4J89_RS24255 PF05193 Peptidase M16 inactive domain C4J89_RS24260 PF08042 PqqA family C4J89_RS24265 PF12706 Beta-lactamase superfamily domain C4J89_RS24270 PF03070 TENA/THI-4/PQQC family C4J89_RS24275 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C4J89_RS24280 PF13186 Iron-sulfur cluster-binding domain C4J89_RS24280 PF04055 Radical SAM superfamily C4J89_RS24285 PF01679 Proteolipid membrane potential modulator C4J89_RS24300 PF00202 Aminotransferase class-III C4J89_RS24305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS24305 PF03466 LysR substrate binding domain C4J89_RS24310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS24310 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J89_RS24310 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS24310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS24315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS24315 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J89_RS24315 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS24315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS24320 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS24325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J89_RS24325 PF02770 Acyl-CoA dehydrogenase, middle domain C4J89_RS24325 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J89_RS24325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J89_RS24340 PF08241 Methyltransferase domain C4J89_RS24345 PF08241 Methyltransferase domain C4J89_RS24345 PF12697 Alpha/beta hydrolase family C4J89_RS24350 PF00155 Aminotransferase class I and II C4J89_RS24355 PF06968 Biotin and Thiamin Synthesis associated domain C4J89_RS24355 PF04055 Radical SAM superfamily C4J89_RS24360 PF00156 Phosphoribosyl transferase domain C4J89_RS24365 PF03459 TOBE domain C4J89_RS24365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS24375 PF01636 Phosphotransferase enzyme family C4J89_RS24385 PF00892 EamA-like transporter family C4J89_RS24395 PF01274 Malate synthase C4J89_RS24400 PF00072 Response regulator receiver domain C4J89_RS24410 PF11490 DNA polymerase III polC-type N-terminus II C4J89_RS24410 PF14480 DNA polymerase III polC-type N-terminus I C4J89_RS24410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C4J89_RS24410 PF14579 Helix-hairpin-helix motif C4J89_RS24410 PF02811 PHP domain C4J89_RS24410 PF00929 Exonuclease C4J89_RS24410 PF07733 Bacterial DNA polymerase III alpha NTPase domain C4J89_RS24415 PF08281 Sigma-70, region 4 C4J89_RS24415 PF04542 Sigma-70 region 2 C4J89_RS24425 PF00593 TonB dependent receptor C4J89_RS24425 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS24450 PF06123 Inner membrane protein CreD C4J89_RS24455 PF00672 HAMP domain C4J89_RS24455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS24455 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS24460 PF00072 Response regulator receiver domain C4J89_RS24460 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS24465 PF18030 RimK PreATP-grasp domain C4J89_RS24465 PF08443 RimK-like ATP-grasp domain C4J89_RS24470 PF01553 Acyltransferase C4J89_RS24485 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C4J89_RS24485 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS24490 PF00551 Formyl transferase C4J89_RS24500 PF17806 Sarcosine oxidase A3 domain C4J89_RS24500 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS24500 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4J89_RS24500 PF01571 Aminomethyltransferase folate-binding domain C4J89_RS24505 PF04267 Sarcosine oxidase, delta subunit family C4J89_RS24510 PF01266 FAD dependent oxidoreductase C4J89_RS24515 PF00464 Serine hydroxymethyltransferase C4J89_RS24520 PF05857 TraX protein C4J89_RS24525 PF01212 Beta-eliminating lyase C4J89_RS24540 PF00970 Oxidoreductase FAD-binding domain C4J89_RS24540 PF00042 Globin C4J89_RS24540 PF00175 Oxidoreductase NAD-binding domain C4J89_RS24545 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4J89_RS24545 PF00355 Rieske [2Fe-2S] domain C4J89_RS24560 PF01012 Electron transfer flavoprotein domain C4J89_RS24560 PF00766 Electron transfer flavoprotein FAD-binding domain C4J89_RS24565 PF02754 Cysteine-rich domain C4J89_RS24565 PF13183 4Fe-4S dicluster domain C4J89_RS24570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J89_RS24600 PF01965 DJ-1/PfpI family C4J89_RS24600 PF12833 Helix-turn-helix domain C4J89_RS24610 PF05853 beta-keto acid cleavage enzyme C4J89_RS24615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J89_RS24615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J89_RS24630 PF12833 Helix-turn-helix domain C4J89_RS24630 PF01965 DJ-1/PfpI family C4J89_RS24635 PF01208 Uroporphyrinogen decarboxylase (URO-D) C4J89_RS24640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4J89_RS24640 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS24645 PF01645 Conserved region in glutamate synthase C4J89_RS24645 PF01493 GXGXG motif C4J89_RS24645 PF04898 Glutamate synthase central domain C4J89_RS24645 PF00310 Glutamine amidotransferases class-II C4J89_RS24660 PF01761 3-dehydroquinate synthase C4J89_RS24665 PF01202 Shikimate kinase C4J89_RS24670 PF03958 Bacterial type II/III secretion system short domain C4J89_RS24670 PF07660 Secretin and TonB N terminus short domain C4J89_RS24670 PF11741 AMIN domain C4J89_RS24670 PF00263 Bacterial type II and III secretion system protein C4J89_RS24685 PF11104 Type IV pilus assembly protein PilM; C4J89_RS24690 PF00912 Transglycosylase C4J89_RS24690 PF00905 Penicillin binding protein transpeptidase domain C4J89_RS24690 PF17092 Penicillin-binding protein OB-like domain C4J89_RS24695 PF00390 Malic enzyme, N-terminal domain C4J89_RS24695 PF03949 Malic enzyme, NAD binding domain C4J89_RS24705 PF01197 Ribosomal protein L31 C4J89_RS24710 PF00270 DEAD/DEAH box helicase C4J89_RS24710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C4J89_RS24710 PF00271 Helicase conserved C-terminal domain C4J89_RS24710 PF18074 Primosomal protein N C-terminal domain C4J89_RS24710 PF17764 3′ DNA-binding domain (3′BD) C4J89_RS24715 PF05746 DALR anticodon binding domain C4J89_RS24715 PF03485 Arginyl tRNA synthetase N terminal domain C4J89_RS24715 PF00750 tRNA synthetases class I (R) C4J89_RS24725 PF00227 Proteasome subunit C4J89_RS24730 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS24730 PF07724 AAA domain (Cdc48 subfamily) C4J89_RS24740 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C4J89_RS24745 PF00561 alpha/beta hydrolase fold C4J89_RS24750 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C4J89_RS24775 PF01209 ubiE/COQ5 methyltransferase family C4J89_RS24785 PF03109 ABC1 family C4J89_RS24790 PF01502 Phosphoribosyl-AMP cyclohydrolase C4J89_RS24795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C4J89_RS24800 PF02416 mttA/Hcf106 family C4J89_RS24805 PF02416 mttA/Hcf106 family C4J89_RS24810 PF00902 Sec-independent protein translocase protein (TatC) C4J89_RS24825 PF00999 Sodium/hydrogen exchanger family C4J89_RS24830 PF03466 LysR substrate binding domain C4J89_RS24830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS24845 PF01226 Formate/nitrite transporter C4J89_RS24855 PF05221 S-adenosyl-L-homocysteine hydrolase C4J89_RS24855 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C4J89_RS24860 PF02219 Methylenetetrahydrofolate reductase C4J89_RS24875 PF00270 DEAD/DEAH box helicase C4J89_RS24875 PF00271 Helicase conserved C-terminal domain C4J89_RS24880 PF04264 YceI-like domain C4J89_RS24885 PF01292 Prokaryotic cytochrome b561 C4J89_RS24890 PF00202 Aminotransferase class-III C4J89_RS24895 PF04452 RNA methyltransferase C4J89_RS24900 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS24905 PF01266 FAD dependent oxidoreductase C4J89_RS24910 PF03466 LysR substrate binding domain C4J89_RS24910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS24915 PF03006 Haemolysin-III related C4J89_RS24920 PF03466 LysR substrate binding domain C4J89_RS24920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS24940 PF00698 Acyl transferase domain C4J89_RS24945 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG C4J89_RS24955 PF01039 Carboxyl transferase domain C4J89_RS24960 PF06857 Malonate decarboxylase delta subunit (MdcD) C4J89_RS24965 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C4J89_RS24970 PF16957 Malonate decarboxylase, alpha subunit, transporter C4J89_RS24995 PF01381 Helix-turn-helix C4J89_RS25005 PF01584 CheW-like domain C4J89_RS25005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS25005 PF00072 Response regulator receiver domain C4J89_RS25005 PF01627 Hpt domain C4J89_RS25005 PF02895 Signal transducing histidine kinase, homodimeric domain C4J89_RS25010 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C4J89_RS25010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS25015 PF01584 CheW-like domain C4J89_RS25020 PF00072 Response regulator receiver domain C4J89_RS25025 PF00072 Response regulator receiver domain C4J89_RS25030 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C4J89_RS25030 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C4J89_RS25045 PF02622 Uncharacterized ACR, COG1678 C4J89_RS25050 PF03652 Holliday junction resolvase C4J89_RS25055 PF00156 Phosphoribosyl transferase domain C4J89_RS25060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4J89_RS25060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4J89_RS25065 PF01979 Amidohydrolase family C4J89_RS25080 PF00877 NlpC/P60 family C4J89_RS25085 PF00437 Type II/IV secretion system protein C4J89_RS25090 PF01168 Alanine racemase, N-terminal domain C4J89_RS25095 PF03807 NADP oxidoreductase coenzyme F420-dependent C4J89_RS25095 PF14748 Pyrroline-5-carboxylate reductase dimerisation C4J89_RS25100 PF02325 YGGT family C4J89_RS25105 PF00561 alpha/beta hydrolase fold C4J89_RS25110 PF00561 alpha/beta hydrolase fold C4J89_RS25110 PF07021 Methionine biosynthesis protein MetW C4J89_RS25120 PF01725 Ham1 family C4J89_RS25125 PF04055 Radical SAM superfamily C4J89_RS25125 PF06969 HemN C-terminal domain C4J89_RS25135 PF02390 Putative methyltransferase C4J89_RS25140 PF05690 Thiazole biosynthesis protein ThiG C4J89_RS25145 PF05690 Thiazole biosynthesis protein ThiG C4J89_RS25145 PF02597 ThiS family C4J89_RS25150 PF04241 Protein of unknown function (DUF423) C4J89_RS25155 PF00912 Transglycosylase C4J89_RS25160 PF04542 Sigma-70 region 2 C4J89_RS25160 PF04545 Sigma-70, region 4 C4J89_RS25160 PF00140 Sigma-70 factor, region 1.2 C4J89_RS25165 PF18075 FtsX extracellular domain C4J89_RS25170 PF00005 ABC transporter C4J89_RS25175 PF00448 SRP54-type protein, GTPase domain C4J89_RS25175 PF02881 SRP54-type protein, helical bundle domain C4J89_RS25180 PF05193 Peptidase M16 inactive domain C4J89_RS25180 PF00675 Insulinase (Peptidase family M16) C4J89_RS25185 PF05193 Peptidase M16 inactive domain C4J89_RS25195 PF00561 alpha/beta hydrolase fold C4J89_RS25205 PF00581 Rhodanese-like domain C4J89_RS25210 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS25215 PF00171 Aldehyde dehydrogenase family C4J89_RS25225 PF00732 GMC oxidoreductase C4J89_RS25225 PF05199 GMC oxidoreductase C4J89_RS25230 PF01467 Cytidylyltransferase-like C4J89_RS25235 PF00037 4Fe-4S binding domain C4J89_RS25240 PF06827 Zinc finger found in FPG and IleRS C4J89_RS25240 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C4J89_RS25240 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C4J89_RS25250 PF17785 PUA-like domain C4J89_RS25250 PF10672 S-adenosylmethionine-dependent methyltransferase C4J89_RS25260 PF00920 Dehydratase family C4J89_RS25270 PF00375 Sodium:dicarboxylate symporter family C4J89_RS25275 PF00186 Dihydrofolate reductase C4J89_RS25285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C4J89_RS25285 PF01926 50S ribosome-binding GTPase C4J89_RS25290 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C4J89_RS25290 PF01266 FAD dependent oxidoreductase C4J89_RS25300 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS25305 PF00005 ABC transporter C4J89_RS25305 PF08402 TOBE domain C4J89_RS25315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS25315 PF03466 LysR substrate binding domain C4J89_RS25320 PF00403 Heavy-metal-associated domain C4J89_RS25325 PF13411 MerR HTH family regulatory protein C4J89_RS25330 PF00303 Thymidylate synthase C4J89_RS25335 PF01790 Prolipoprotein diacylglyceryl transferase C4J89_RS25345 PF01590 GAF domain C4J89_RS25345 PF05524 PEP-utilising enzyme, N-terminal C4J89_RS25345 PF00391 PEP-utilising enzyme, mobile domain C4J89_RS25345 PF02896 PEP-utilising enzyme, TIM barrel domain C4J89_RS25350 PF00293 NUDIX domain C4J89_RS25365 PF13460 NAD(P)H-binding C4J89_RS25365 PF11066 Protein of unknown function (DUF2867) C4J89_RS25375 PF00291 Pyridoxal-phosphate dependent enzyme C4J89_RS25375 PF00585 C-terminal regulatory domain of Threonine dehydratase C4J89_RS25380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C4J89_RS25385 PF04389 Peptidase family M28 C4J89_RS25390 PF06977 SdiA-regulated C4J89_RS25395 PF06977 SdiA-regulated C4J89_RS25400 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4J89_RS25405 PF02913 FAD linked oxidases, C-terminal domain C4J89_RS25405 PF01565 FAD binding domain C4J89_RS25415 PF01842 ACT domain C4J89_RS25415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J89_RS25415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J89_RS25425 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS25450 PF01804 Penicillin amidase C4J89_RS25455 PF12833 Helix-turn-helix domain C4J89_RS25455 PF01965 DJ-1/PfpI family C4J89_RS25465 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS25470 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS25475 PF08402 TOBE domain C4J89_RS25475 PF00005 ABC transporter C4J89_RS25480 PF13416 Bacterial extracellular solute-binding protein C4J89_RS25485 PF13416 Bacterial extracellular solute-binding protein C4J89_RS25490 PF00202 Aminotransferase class-III C4J89_RS25495 PF00120 Glutamine synthetase, catalytic domain C4J89_RS25500 PF00120 Glutamine synthetase, catalytic domain C4J89_RS25510 PF03459 TOBE domain C4J89_RS25510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS25515 PF00005 ABC transporter C4J89_RS25520 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS25525 PF00296 Luciferase-like monooxygenase C4J89_RS25530 PF09084 NMT1/THI5 like C4J89_RS25535 PF03358 NADPH-dependent FMN reductase C4J89_RS25540 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4J89_RS25540 PF00578 AhpC/TSA family C4J89_RS25545 PF03573 outer membrane porin, OprD family C4J89_RS25550 PF00696 Amino acid kinase family C4J89_RS25550 PF00583 Acetyltransferase (GNAT) family C4J89_RS25555 PF07687 Peptidase dimerisation domain C4J89_RS25555 PF01546 Peptidase family M20/M25/M40 C4J89_RS25565 PF01037 Lrp/AsnC ligand binding domain C4J89_RS25565 PF13404 AsnC-type helix-turn-helix domain C4J89_RS25575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C4J89_RS25575 PF00437 Type II/IV secretion system protein C4J89_RS25580 PF16200 C-terminal region of band_7 C4J89_RS25580 PF01145 SPFH domain / Band 7 family C4J89_RS25595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C4J89_RS25600 PF01597 Glycine cleavage H-protein C4J89_RS25605 PF01571 Aminomethyltransferase folate-binding domain C4J89_RS25605 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4J89_RS25610 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS25620 PF01494 FAD binding domain C4J89_RS25630 PF01494 FAD binding domain C4J89_RS25635 PF00557 Metallopeptidase family M24 C4J89_RS25635 PF05195 Aminopeptidase P, N-terminal domain C4J89_RS25640 PF03695 Uncharacterised protein family (UPF0149) C4J89_RS25650 PF05164 Cell division protein ZapA C4J89_RS25660 PF01812 5-formyltetrahydrofolate cyclo-ligase family C4J89_RS25680 PF08990 Erythronolide synthase docking C4J89_RS25680 PF00698 Acyl transferase domain C4J89_RS25680 PF16197 Ketoacyl-synthetase C-terminal extension C4J89_RS25680 PF14765 Polyketide synthase dehydratase C4J89_RS25680 PF00550 Phosphopantetheine attachment site C4J89_RS25680 PF08659 KR domain C4J89_RS25680 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J89_RS25680 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J89_RS25680 PF08240 Alcohol dehydrogenase GroES-like domain C4J89_RS25685 PF07690 Major Facilitator Superfamily C4J89_RS25695 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS25695 PF00593 TonB dependent receptor C4J89_RS25710 PF00175 Oxidoreductase NAD-binding domain C4J89_RS25715 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C4J89_RS25720 PF01757 Acyltransferase family C4J89_RS25725 PF07497 Rho termination factor, RNA-binding domain C4J89_RS25725 PF07498 Rho termination factor, N-terminal domain C4J89_RS25725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J89_RS25730 PF00085 Thioredoxin C4J89_RS25735 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS25735 PF07729 FCD domain C4J89_RS25740 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS25745 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS25750 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS25755 PF00005 ABC transporter C4J89_RS25765 PF13954 PapC N-terminal domain C4J89_RS25765 PF13953 PapC C-terminal domain C4J89_RS25765 PF00577 Outer membrane usher protein C4J89_RS25770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J89_RS25780 PF02541 Ppx/GppA phosphatase family C4J89_RS25785 PF17941 Polyphosphate kinase C-terminal domain 1 C4J89_RS25785 PF13089 Polyphosphate kinase N-terminal domain C4J89_RS25785 PF13090 Polyphosphate kinase C-terminal domain 2 C4J89_RS25785 PF02503 Polyphosphate kinase middle domain C4J89_RS25795 PF09335 SNARE associated Golgi protein C4J89_RS25800 PF04116 Fatty acid hydroxylase superfamily C4J89_RS25810 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C4J89_RS25815 PF03239 Iron permease FTR1 family C4J89_RS25820 PF01810 LysE type translocator C4J89_RS25830 PF12848 ABC transporter C4J89_RS25830 PF00005 ABC transporter C4J89_RS25845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J89_RS25845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J89_RS25850 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C4J89_RS25855 PF02600 Disulfide bond formation protein DsbB C4J89_RS25870 PF03900 Porphobilinogen deaminase, C-terminal domain C4J89_RS25870 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C4J89_RS25875 PF04397 LytTr DNA-binding domain C4J89_RS25875 PF00072 Response regulator receiver domain C4J89_RS25880 PF00206 Lyase C4J89_RS25880 PF14698 Argininosuccinate lyase C-terminal C4J89_RS25885 PF14497 Glutathione S-transferase, C-terminal domain C4J89_RS25885 PF13417 Glutathione S-transferase, N-terminal domain C4J89_RS25900 PF12633 Adenylate cyclase NT domain C4J89_RS25900 PF01295 Adenylate cyclase, class-I C4J89_RS25905 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J89_RS25905 PF14760 Rnk N-terminus C4J89_RS25915 PF01491 Frataxin-like domain C4J89_RS25920 PF13627 Prokaryotic lipoprotein-attachment site C4J89_RS25925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4J89_RS25925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4J89_RS25930 PF01678 Diaminopimelate epimerase C4J89_RS25940 PF00589 Phage integrase family C4J89_RS25940 PF02899 Phage integrase, N-terminal SAM-like domain C4J89_RS25945 PF13419 Haloacid dehalogenase-like hydrolase C4J89_RS25955 PF01894 Uncharacterised protein family UPF0047 C4J89_RS25960 PF00909 Ammonium Transporter Family C4J89_RS25965 PF00543 Nitrogen regulatory protein P-II C4J89_RS25970 PF04380 Membrane fusogenic activity C4J89_RS25975 PF01078 Magnesium chelatase, subunit ChlI C4J89_RS25975 PF13335 Magnesium chelatase, subunit ChlI C-terminal C4J89_RS25980 PF00672 HAMP domain C4J89_RS25980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J89_RS25985 PF03466 LysR substrate binding domain C4J89_RS25985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS25990 PF01554 MatE C4J89_RS25995 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS25995 PF00563 EAL domain C4J89_RS25995 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS26000 PF00580 UvrD/REP helicase N-terminal domain C4J89_RS26000 PF13361 UvrD-like helicase C-terminal domain C4J89_RS26010 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C4J89_RS26010 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C4J89_RS26020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J89_RS26030 PF00842 Alanine racemase, C-terminal domain C4J89_RS26030 PF01168 Alanine racemase, N-terminal domain C4J89_RS26035 PF01042 Endoribonuclease L-PSP C4J89_RS26040 PF01266 FAD dependent oxidoreductase C4J89_RS26045 PF01037 Lrp/AsnC ligand binding domain C4J89_RS26055 PF01266 FAD dependent oxidoreductase C4J89_RS26065 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS26065 PF00155 Aminotransferase class I and II C4J89_RS26070 PF13091 PLD-like domain C4J89_RS26075 PF00171 Aldehyde dehydrogenase family C4J89_RS26085 PF00471 Ribosomal protein L33 C4J89_RS26090 PF00830 Ribosomal L28 family C4J89_RS26095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J89_RS26100 PF04002 RadC-like JAB domain C4J89_RS26105 PF02441 Flavoprotein C4J89_RS26105 PF04127 DNA / pantothenate metabolism flavoprotein C4J89_RS26110 PF00692 dUTPase C4J89_RS26120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4J89_RS26120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4J89_RS26120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4J89_RS26120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4J89_RS26125 PF00696 Amino acid kinase family C4J89_RS26130 PF00156 Phosphoribosyl transferase domain C4J89_RS26135 PF03372 Endonuclease/Exonuclease/phosphatase family C4J89_RS26145 PF01138 3' exoribonuclease family, domain 1 C4J89_RS26145 PF03725 3' exoribonuclease family, domain 2 C4J89_RS26150 PF08340 Domain of unknown function (DUF1732) C4J89_RS26150 PF03755 YicC-like family, N-terminal region C4J89_RS26155 PF00625 Guanylate kinase C4J89_RS26160 PF01192 RNA polymerase Rpb6 C4J89_RS26165 PF02824 TGS domain C4J89_RS26165 PF04607 Region found in RelA / SpoT proteins C4J89_RS26165 PF13291 ACT domain C4J89_RS26170 PF01042 Endoribonuclease L-PSP C4J89_RS26185 PF01618 MotA/TolQ/ExbB proton channel family C4J89_RS26190 PF02472 Biopolymer transport protein ExbD/TolR C4J89_RS26195 PF03544 Gram-negative bacterial TonB protein C-terminal C4J89_RS26200 PF03466 LysR substrate binding domain C4J89_RS26200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS26205 PF00270 DEAD/DEAH box helicase C4J89_RS26205 PF00271 Helicase conserved C-terminal domain C4J89_RS26205 PF17191 RecG wedge domain C4J89_RS26225 PF03781 Sulfatase-modifying factor enzyme 1 C4J89_RS26235 PF00005 ABC transporter C4J89_RS26240 PF03793 PASTA domain C4J89_RS26240 PF00069 Protein kinase domain C4J89_RS26255 PF06744 Type VI secretion protein IcmF C-terminal C4J89_RS26255 PF14331 ImcF-related N-terminal domain C4J89_RS26255 PF06761 Intracellular multiplication and human macrophage-killing C4J89_RS26260 PF00691 OmpA family C4J89_RS26260 PF13677 Membrane MotB of proton-channel complex MotA/MotB C4J89_RS26265 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE C4J89_RS26280 PF06812 ImpA, N-terminal, type VI secretion system C4J89_RS26285 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 C4J89_RS26290 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath C4J89_RS26295 PF05638 Type VI secretion system effector, Hcp C4J89_RS26300 PF04965 Gene 25-like lysozyme C4J89_RS26305 PF05947 Type VI secretion system, TssF C4J89_RS26315 PF17871 AAA lid domain C4J89_RS26315 PF00004 ATPase family associated with various cellular activities (AAA) C4J89_RS26315 PF07724 AAA domain (Cdc48 subfamily) C4J89_RS26315 PF10431 C-terminal, D2-small domain, of ClpB protein C4J89_RS26320 PF04717 Type VI secretion system, phage-baseplate injector C4J89_RS26340 PF00216 Bacterial DNA-binding protein C4J89_RS26345 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J89_RS26345 PF18113 Rubredoxin binding C-terminal domain C4J89_RS26350 PF00301 Rubredoxin C4J89_RS26355 PF04345 Chorismate lyase C4J89_RS26360 PF01040 UbiA prenyltransferase family C4J89_RS26370 PF00486 Transcriptional regulatory protein, C terminal C4J89_RS26370 PF00072 Response regulator receiver domain C4J89_RS26375 PF00989 PAS fold C4J89_RS26375 PF00512 His Kinase A (phospho-acceptor) domain C4J89_RS26375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J89_RS26375 PF11808 Phosphate regulon sensor protein PhoR C4J89_RS26380 PF01595 Cyclin M transmembrane N-terminal domain C4J89_RS26380 PF03471 Transporter associated domain C4J89_RS26380 PF00571 CBS domain C4J89_RS26385 PF00072 Response regulator receiver domain C4J89_RS26390 PF01895 PhoU domain C4J89_RS26395 PF00005 ABC transporter C4J89_RS26400 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS26405 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS26410 PF12849 PBP superfamily domain C4J89_RS26425 PF07690 Major Facilitator Superfamily C4J89_RS26430 PF03061 Thioesterase superfamily C4J89_RS26435 PF01263 Aldose 1-epimerase C4J89_RS26450 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C4J89_RS26450 PF02222 ATP-grasp domain C4J89_RS26455 PF00731 AIR carboxylase C4J89_RS26460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS26460 PF03466 LysR substrate binding domain C4J89_RS26465 PF00206 Lyase C4J89_RS26465 PF10415 Fumarase C C-terminus C4J89_RS26470 PF01235 Sodium:alanine symporter family C4J89_RS26475 PF17763 Glutaminase/Asparaginase C-terminal domain C4J89_RS26475 PF00710 Asparaginase, N-terminal C4J89_RS26480 PF00392 Bacterial regulatory proteins, gntR family C4J89_RS26480 PF00155 Aminotransferase class I and II C4J89_RS26485 PF04299 Putative FMN-binding domain C4J89_RS26505 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J89_RS26510 PF00528 Binding-protein-dependent transport system inner membrane component C4J89_RS26520 PF00682 HMGL-like C4J89_RS26520 PF02436 Conserved carboxylase domain C4J89_RS26520 PF00364 Biotin-requiring enzyme C4J89_RS26525 PF02785 Biotin carboxylase C-terminal domain C4J89_RS26525 PF00289 Biotin carboxylase, N-terminal domain C4J89_RS26525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J89_RS26530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J89_RS26530 PF03466 LysR substrate binding domain C4J89_RS26540 PF01380 SIS domain C4J89_RS26540 PF01418 Helix-turn-helix domain, rpiR family C4J89_RS26545 PF00990 Diguanylate cyclase, GGDEF domain C4J89_RS26545 PF03707 Bacterial signalling protein N terminal repeat C4J89_RS26545 PF13188 PAS domain C4J89_RS26545 PF00563 EAL domain C4J89_RS26550 PF00580 UvrD/REP helicase N-terminal domain C4J89_RS26550 PF13361 UvrD-like helicase C-terminal domain C4J89_RS26570 PF00999 Sodium/hydrogen exchanger family C4J89_RS26570 PF02254 TrkA-N domain C4J89_RS26575 PF03061 Thioesterase superfamily C4J89_RS26580 PF08543 Phosphomethylpyrimidine kinase C4J89_RS26590 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J89_RS26590 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J89_RS26600 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J89_RS26600 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J89_RS26610 PF01520 N-acetylmuramoyl-L-alanine amidase C4J89_RS26610 PF11741 AMIN domain C4J89_RS26615 PF02649 Type I GTP cyclohydrolase folE2 C4J89_RS26620 PF00005 ABC transporter C4J89_RS26625 PF00950 ABC 3 transport family C4J89_RS26630 PF01297 Zinc-uptake complex component A periplasmic C4J89_RS26635 PF12276 Protein of unknown function (DUF3617) C4J89_RS26640 PF13396 Phospholipase_D-nuclease N-terminal C4J89_RS26640 PF13091 PLD-like domain C4J89_RS26655 PF05114 Protein of unknown function (DUF692) C4J89_RS26665 PF00403 Heavy-metal-associated domain C4J89_RS26685 PF01066 CDP-alcohol phosphatidyltransferase C4J89_RS26690 PF12147 Putative methyltransferase C4J89_RS26690 PF12146 Serine aminopeptidase, S33 C4J89_RS26695 PF00782 Dual specificity phosphatase, catalytic domain C4J89_RS26720 PF00440 Bacterial regulatory proteins, tetR family C4J89_RS26725 PF01425 Amidase C4J89_RS26735 PF01380 SIS domain C4J89_RS26740 PF08220 DeoR-like helix-turn-helix domain C4J89_RS26740 PF00455 DeoR C terminal sensor domain C4J89_RS26750 PF12804 MobA-like NTP transferase domain C4J89_RS26750 PF00132 Bacterial transferase hexapeptide (six repeats) C4J89_RS26755 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C4J89_RS26755 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C4J89_RS26760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J89_RS26760 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J89_RS26765 PF00231 ATP synthase C4J89_RS26770 PF00306 ATP synthase alpha/beta chain, C terminal domain C4J89_RS26770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J89_RS26770 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J89_RS26775 PF00213 ATP synthase delta (OSCP) subunit C4J89_RS26780 PF00430 ATP synthase B/B' CF(0) C4J89_RS26785 PF00137 ATP synthase subunit C C4J89_RS26790 PF00119 ATP synthase A chain C4J89_RS26795 PF03899 ATP synthase I chain C4J89_RS26800 PF02195 ParB-like nuclease domain C4J89_RS26800 PF17762 HTH domain found in ParB protein C4J89_RS26805 PF13614 AAA domain C4J89_RS26810 PF02527 rRNA small subunit methyltransferase G C4J89_RS26815 PF13932 GidA associated domain C4J89_RS26815 PF01134 Glucose inhibited division protein A C4J89_RS26820 PF04542 Sigma-70 region 2 C4J89_RS26820 PF08281 Sigma-70, region 4 C4J89_RS26825 PF04773 FecR protein C4J89_RS26825 PF16220 Domain of unknown function (DUF4880) C4J89_RS26830 PF00593 TonB dependent receptor C4J89_RS26830 PF07715 TonB-dependent Receptor Plug Domain C4J89_RS26835 PF01926 50S ribosome-binding GTPase C4J89_RS26835 PF12631 MnmE helical domain C4J89_RS26835 PF10396 GTP-binding protein TrmE N-terminus C4J89_RS26840 PF14849 YidC periplasmic domain C4J89_RS26840 PF02096 60Kd inner membrane protein C4J89_RS26845 PF01809 Putative membrane protein insertion efficiency factor C4J89_RS26850 PF00825 Ribonuclease P C4J89_RS26855 PF00468 Ribosomal protein L34