locus-tag class description C4J88_RS00005 PF11638 DnaA N-terminal domain C4J88_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix C4J88_RS00005 PF00308 Bacterial dnaA protein C4J88_RS00010 PF02767 DNA polymerase III beta subunit, central domain C4J88_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C4J88_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C4J88_RS00015 PF02463 RecF/RecN/SMC N terminal domain C4J88_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS00020 PF00204 DNA gyrase B C4J88_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus C4J88_RS00020 PF18053 DNA gyrase B subunit insert domain C4J88_RS00020 PF01751 Toprim domain C4J88_RS00025 PF00072 Response regulator receiver domain C4J88_RS00025 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS00030 PF18698 Histidine kinase sensor domain C4J88_RS00030 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS00030 PF00672 HAMP domain C4J88_RS00030 PF00989 PAS fold C4J88_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit C4J88_RS00045 PF05746 DALR anticodon binding domain C4J88_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit C4J88_RS00055 PF03352 Methyladenine glycosylase C4J88_RS00070 PF02254 TrkA-N domain C4J88_RS00070 PF02080 TrkA-C domain C4J88_RS00075 PF01029 NusB family C4J88_RS00075 PF01189 16S rRNA methyltransferase RsmB/F C4J88_RS00080 PF00551 Formyl transferase C4J88_RS00080 PF02911 Formyl transferase, C-terminal domain C4J88_RS00085 PF01327 Polypeptide deformylase C4J88_RS00095 PF02481 DNA recombination-mediator protein A C4J88_RS00095 PF17782 DprA winged helix domain C4J88_RS00100 PF01300 Telomere recombination C4J88_RS00105 PF00107 Zinc-binding dehydrogenase C4J88_RS00105 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS00110 PF01218 Coproporphyrinogen III oxidase C4J88_RS00115 PF08501 Shikimate dehydrogenase substrate binding domain C4J88_RS00115 PF01488 Shikimate / quinate 5-dehydrogenase C4J88_RS00115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C4J88_RS00120 PF00916 Sulfate permease family C4J88_RS00120 PF01740 STAS domain C4J88_RS00125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J88_RS00130 PF12411 Choline sulfatase enzyme C terminal C4J88_RS00130 PF00884 Sulfatase C4J88_RS00135 PF03466 LysR substrate binding domain C4J88_RS00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS00145 PF05035 2-keto-3-deoxy-galactonokinase C4J88_RS00150 PF01081 KDPG and KHG aldolase C4J88_RS00155 PF13378 Enolase C-terminal domain-like C4J88_RS00155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J88_RS00160 PF07690 Major Facilitator Superfamily C4J88_RS00165 PF00290 Tryptophan synthase alpha chain C4J88_RS00170 PF00291 Pyridoxal-phosphate dependent enzyme C4J88_RS00175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS00175 PF03466 LysR substrate binding domain C4J88_RS00185 PF07311 Dodecin C4J88_RS00195 PF00296 Luciferase-like monooxygenase C4J88_RS00200 PF02566 OsmC-like protein C4J88_RS00225 PF14431 YwqJ-like deaminase C4J88_RS00225 PF18807 Tripartite Tc toxins repeat C4J88_RS00230 PF13419 Haloacid dehalogenase-like hydrolase C4J88_RS00235 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS00240 PF01432 Peptidase family M3 C4J88_RS00255 PF13618 Gluconate 2-dehydrogenase subunit 3 C4J88_RS00260 PF00732 GMC oxidoreductase C4J88_RS00260 PF05199 GMC oxidoreductase C4J88_RS00265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J88_RS00265 PF00034 Cytochrome c C4J88_RS00270 PF04055 Radical SAM superfamily C4J88_RS00275 PF00484 Carbonic anhydrase C4J88_RS00280 PF00916 Sulfate permease family C4J88_RS00280 PF01740 STAS domain C4J88_RS00290 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C4J88_RS00290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4J88_RS00295 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J88_RS00300 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C4J88_RS00305 PF00510 Cytochrome c oxidase subunit III C4J88_RS00325 PF02628 Cytochrome oxidase assembly protein C4J88_RS00330 PF01040 UbiA prenyltransferase family C4J88_RS00335 PF02630 SCO1/SenC C4J88_RS00340 PF03180 NLPA lipoprotein C4J88_RS00345 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS00350 PF09383 NIL domain C4J88_RS00350 PF00005 ABC transporter C4J88_RS00355 PF00199 Catalase C4J88_RS00355 PF18011 C-terminal domain found in long catalases C4J88_RS00355 PF06628 Catalase-related immune-responsive C4J88_RS00365 PF00950 ABC 3 transport family C4J88_RS00370 PF00005 ABC transporter C4J88_RS00375 PF01475 Ferric uptake regulator family C4J88_RS00380 PF01297 Zinc-uptake complex component A periplasmic C4J88_RS00385 PF01636 Phosphotransferase enzyme family C4J88_RS00395 PF01612 3'-5' exonuclease C4J88_RS00395 PF01367 5'-3' exonuclease, C-terminal SAM fold C4J88_RS00395 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C4J88_RS00395 PF00476 DNA polymerase family A C4J88_RS00400 PF01926 50S ribosome-binding GTPase C4J88_RS00410 PF00034 Cytochrome c C4J88_RS00415 PF01323 DSBA-like thioredoxin domain C4J88_RS00425 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS00430 PF01510 N-acetylmuramoyl-L-alanine amidase C4J88_RS00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS00435 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB C4J88_RS00435 PF08448 PAS fold C4J88_RS00435 PF00672 HAMP domain C4J88_RS00435 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS00440 PF00158 Sigma-54 interaction domain C4J88_RS00440 PF02954 Bacterial regulatory protein, Fis family C4J88_RS00440 PF00072 Response regulator receiver domain C4J88_RS00450 PF07043 Protein of unknown function (DUF1328) C4J88_RS00460 PF00375 Sodium:dicarboxylate symporter family C4J88_RS00465 PF07670 Nucleoside recognition C4J88_RS00480 PF00005 ABC transporter C4J88_RS00485 PF02405 Permease MlaE C4J88_RS00495 PF05193 Peptidase M16 inactive domain C4J88_RS00495 PF00675 Insulinase (Peptidase family M16) C4J88_RS00500 PF02690 Na+/Pi-cotransporter C4J88_RS00505 PF03741 Integral membrane protein TerC family C4J88_RS00510 PF03600 Citrate transporter C4J88_RS00540 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C4J88_RS00540 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C4J88_RS00545 PF02233 NAD(P) transhydrogenase beta subunit C4J88_RS00550 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C4J88_RS00555 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C4J88_RS00555 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C4J88_RS00565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS00565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS00565 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS00570 PF02515 CoA-transferase family III C4J88_RS00610 PF00672 HAMP domain C4J88_RS00610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS00610 PF02743 Cache domain C4J88_RS00615 PF00668 Condensation domain C4J88_RS00615 PF00550 Phosphopantetheine attachment site C4J88_RS00615 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS00615 PF00501 AMP-binding enzyme C4J88_RS00615 PF00975 Thioesterase domain C4J88_RS00640 PF00563 EAL domain C4J88_RS00640 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS00640 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS00640 PF13188 PAS domain C4J88_RS00660 PF00664 ABC transporter transmembrane region C4J88_RS00660 PF00005 ABC transporter C4J88_RS00660 PF03412 Peptidase C39 family C4J88_RS00665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J88_RS00665 PF00529 HlyD membrane-fusion protein of T1SS C4J88_RS00670 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C4J88_RS00675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS00675 PF03466 LysR substrate binding domain C4J88_RS00680 PF07690 Major Facilitator Superfamily C4J88_RS00685 PF13533 Biotin-lipoyl like C4J88_RS00690 PF02321 Outer membrane efflux protein C4J88_RS00780 PF04632 Fusaric acid resistance protein family C4J88_RS00790 PF13533 Biotin-lipoyl like C4J88_RS00795 PF02321 Outer membrane efflux protein C4J88_RS00805 PF06097 Bacterial protein of unknown function (DUF945) C4J88_RS00815 PF14883 Hypothetical glycosyl hydrolase family 13 C4J88_RS00815 PF01522 Polysaccharide deacetylase C4J88_RS00820 PF00535 Glycosyl transferase family 2 C4J88_RS00830 PF08479 POTRA domain, ShlB-type C4J88_RS00830 PF17287 POTRA domain C4J88_RS00830 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB C4J88_RS00845 PF04829 Pre-toxin domain with VENN motif C4J88_RS00845 PF13332 Hemagglutinin repeat C4J88_RS00845 PF05860 haemagglutination activity domain C4J88_RS00910 PF03783 Curli production assembly/transport component CsgG C4J88_RS00920 PF05643 Putative bacterial lipoprotein (DUF799) C4J88_RS00925 PF00092 von Willebrand factor type A domain C4J88_RS00925 PF12450 von Willebrand factor C4J88_RS00925 PF12034 Domain of unknown function (DUF3520) C4J88_RS00930 PF08281 Sigma-70, region 4 C4J88_RS00930 PF04542 Sigma-70 region 2 C4J88_RS00970 PF00226 DnaJ domain C4J88_RS00970 PF01556 DnaJ C terminal domain C4J88_RS00970 PF00684 DnaJ central domain C4J88_RS01000 PF00171 Aldehyde dehydrogenase family C4J88_RS01005 PF00202 Aminotransferase class-III C4J88_RS01015 PF00795 Carbon-nitrogen hydrolase C4J88_RS01020 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS01020 PF08448 PAS fold C4J88_RS01030 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS01030 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS01030 PF00563 EAL domain C4J88_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01050 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01055 PF12857 TOBE-like domain C4J88_RS01055 PF00005 ABC transporter C4J88_RS01065 PF00576 HIUase/Transthyretin family C4J88_RS01075 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS01075 PF00072 Response regulator receiver domain C4J88_RS01080 PF12833 Helix-turn-helix domain C4J88_RS01080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J88_RS01090 PF00005 ABC transporter C4J88_RS01095 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01100 PF09084 NMT1/THI5 like C4J88_RS01105 PF03466 LysR substrate binding domain C4J88_RS01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS01110 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C4J88_RS01120 PF16347 Domain of unknown function (DUF4976) C4J88_RS01120 PF00884 Sulfatase C4J88_RS01130 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS01130 PF00593 TonB dependent receptor C4J88_RS01135 PF07690 Major Facilitator Superfamily C4J88_RS01140 PF03544 Gram-negative bacterial TonB protein C-terminal C4J88_RS01145 PF01618 MotA/TolQ/ExbB proton channel family C4J88_RS01150 PF02472 Biopolymer transport protein ExbD/TolR C4J88_RS01160 PF00158 Sigma-54 interaction domain C4J88_RS01165 PF03180 NLPA lipoprotein C4J88_RS01175 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01180 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01185 PF00005 ABC transporter C4J88_RS01190 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS01200 PF13476 AAA domain C4J88_RS01215 PF00873 AcrB/AcrD/AcrF family C4J88_RS01230 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01235 PF09383 NIL domain C4J88_RS01235 PF00005 ABC transporter C4J88_RS01240 PF03180 NLPA lipoprotein C4J88_RS01250 PF00296 Luciferase-like monooxygenase C4J88_RS01255 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS01255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS01260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS01260 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS01270 PF00005 ABC transporter C4J88_RS01275 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01280 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS01285 PF00291 Pyridoxal-phosphate dependent enzyme C4J88_RS01290 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS01295 PF02028 BCCT, betaine/carnitine/choline family transporter C4J88_RS01300 PF00248 Aldo/keto reductase family C4J88_RS01305 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C4J88_RS01310 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01315 PF00005 ABC transporter C4J88_RS01320 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J88_RS01325 PF04262 Glutamate-cysteine ligase C4J88_RS01335 PF17674 HHH domain C4J88_RS01335 PF09371 Tex-like protein N-terminal domain C4J88_RS01335 PF16921 Tex protein YqgF-like domain C4J88_RS01335 PF00575 S1 RNA binding domain C4J88_RS01340 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS01340 PF00072 Response regulator receiver domain C4J88_RS01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS01345 PF00672 HAMP domain C4J88_RS01345 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS01350 PF08443 RimK-like ATP-grasp domain C4J88_RS01350 PF18030 RimK PreATP-grasp domain C4J88_RS01355 PF08443 RimK-like ATP-grasp domain C4J88_RS01355 PF18030 RimK PreATP-grasp domain C4J88_RS01360 PF12792 CSS motif domain associated with EAL C4J88_RS01360 PF00563 EAL domain C4J88_RS01365 PF01479 S4 domain C4J88_RS01375 PF01430 Hsp33 protein C4J88_RS01380 PF01293 Phosphoenolpyruvate carboxykinase C4J88_RS01405 PF02661 Fic/DOC family C4J88_RS01420 PF00271 Helicase conserved C-terminal domain C4J88_RS01420 PF00270 DEAD/DEAH box helicase C4J88_RS01420 PF09382 RQC domain C4J88_RS01420 PF00570 HRDC domain C4J88_RS01420 PF16124 RecQ zinc-binding C4J88_RS01425 PF03061 Thioesterase superfamily C4J88_RS01435 PF00384 Molybdopterin oxidoreductase C4J88_RS01440 PF02634 FdhD/NarQ family C4J88_RS01445 PF01476 LysM domain C4J88_RS01445 PF04972 BON domain C4J88_RS01450 PF13419 Haloacid dehalogenase-like hydrolase C4J88_RS01455 PF00293 NUDIX domain C4J88_RS01460 PF00459 Inositol monophosphatase family C4J88_RS01470 PF02954 Bacterial regulatory protein, Fis family C4J88_RS01470 PF00158 Sigma-54 interaction domain C4J88_RS01470 PF00072 Response regulator receiver domain C4J88_RS01475 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS01475 PF02743 Cache domain C4J88_RS01480 PF04321 RmlD substrate binding domain C4J88_RS01485 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C4J88_RS01490 PF00483 Nucleotidyl transferase C4J88_RS01495 PF16363 GDP-mannose 4,6 dehydratase C4J88_RS01500 PF00202 Aminotransferase class-III C4J88_RS01505 PF04371 Porphyromonas-type peptidyl-arginine deiminase C4J88_RS01515 PF03573 outer membrane porin, OprD family C4J88_RS01535 PF00698 Acyl transferase domain C4J88_RS01535 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS01535 PF08990 Erythronolide synthase docking C4J88_RS01535 PF16197 Ketoacyl-synthetase C-terminal extension C4J88_RS01535 PF08659 KR domain C4J88_RS01535 PF14765 Polyketide synthase dehydratase C4J88_RS01535 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J88_RS01535 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J88_RS01535 PF00550 Phosphopantetheine attachment site C4J88_RS01540 PF00106 short chain dehydrogenase C4J88_RS01545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J88_RS01550 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01600 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS01605 PF00005 ABC transporter C4J88_RS01610 PF00324 Amino acid permease C4J88_RS01635 PF04362 Bacterial Fe(2+) trafficking C4J88_RS01640 PF14815 NUDIX domain C4J88_RS01640 PF00730 HhH-GPD superfamily base excision DNA repair protein C4J88_RS01640 PF00633 Helix-hairpin-helix motif C4J88_RS01640 PF10576 Iron-sulfur binding domain of endonuclease III C4J88_RS01650 PF07690 Major Facilitator Superfamily C4J88_RS01655 PF00475 Imidazoleglycerol-phosphate dehydratase C4J88_RS01660 PF00117 Glutamine amidotransferase class-I C4J88_RS01670 PF00977 Histidine biosynthesis protein C4J88_RS01675 PF00977 Histidine biosynthesis protein C4J88_RS01685 PF04748 Divergent polysaccharide deacetylase C4J88_RS01690 PF13180 PDZ domain C4J88_RS01690 PF03572 Peptidase family S41 C4J88_RS01695 PF01551 Peptidase family M23 C4J88_RS01700 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C4J88_RS01700 PF01676 Metalloenzyme superfamily C4J88_RS01705 PF00581 Rhodanese-like domain C4J88_RS01710 PF00462 Glutaredoxin C4J88_RS01715 PF02556 Preprotein translocase subunit SecB C4J88_RS01720 PF00588 SpoU rRNA Methylase family C4J88_RS01735 PF00158 Sigma-54 interaction domain C4J88_RS01735 PF02954 Bacterial regulatory protein, Fis family C4J88_RS01735 PF00072 Response regulator receiver domain C4J88_RS01740 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS01740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS01740 PF00989 PAS fold C4J88_RS01745 PF01817 Chorismate mutase type II C4J88_RS01750 PF00120 Glutamine synthetase, catalytic domain C4J88_RS01750 PF03951 Glutamine synthetase, beta-Grasp domain C4J88_RS01760 PF02568 Thiamine biosynthesis protein (ThiI) C4J88_RS01760 PF02926 THUMP domain C4J88_RS01765 PF03144 Elongation factor Tu domain 2 C4J88_RS01765 PF00009 Elongation factor Tu GTP binding domain C4J88_RS01765 PF00679 Elongation factor G C-terminus C4J88_RS01775 PF00343 Carbohydrate phosphorylase C4J88_RS01790 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C4J88_RS01800 PF08212 Lipocalin-like domain C4J88_RS01805 PF01979 Amidohydrolase family C4J88_RS01810 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS01810 PF07702 UTRA domain C4J88_RS01815 PF05962 HutD C4J88_RS01820 PF17391 Urocanase N-terminal domain C4J88_RS01820 PF01175 Urocanase Rossmann-like domain C4J88_RS01820 PF17392 Urocanase C-terminal domain C4J88_RS01825 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J88_RS01835 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01840 PF00571 CBS domain C4J88_RS01840 PF00005 ABC transporter C4J88_RS01845 PF00221 Aromatic amino acid lyase C4J88_RS01850 PF00221 Aromatic amino acid lyase C4J88_RS01860 PF01979 Amidohydrolase family C4J88_RS01870 PF00561 alpha/beta hydrolase fold C4J88_RS01875 PF02580 D-Tyr-tRNA(Tyr) deacylase C4J88_RS01880 PF04349 Periplasmic glucan biosynthesis protein, MdoG C4J88_RS01885 PF00535 Glycosyl transferase family 2 C4J88_RS01890 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS01895 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS01900 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS01905 PF00005 ABC transporter C4J88_RS01910 PF16591 Helical bimodular sensor domain C4J88_RS01910 PF00672 HAMP domain C4J88_RS01910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS01915 PF16591 Helical bimodular sensor domain C4J88_RS01915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS01915 PF00672 HAMP domain C4J88_RS01930 PF06476 Protein of unknown function (DUF1090) C4J88_RS01935 PF03120 NAD-dependent DNA ligase OB-fold domain C4J88_RS01935 PF01653 NAD-dependent DNA ligase adenylation domain C4J88_RS01940 PF02773 S-adenosylmethionine synthetase, C-terminal domain C4J88_RS01940 PF00438 S-adenosylmethionine synthetase, N-terminal domain C4J88_RS01940 PF02772 S-adenosylmethionine synthetase, central domain C4J88_RS01945 PF01022 Bacterial regulatory protein, arsR family C4J88_RS01950 PF02779 Transketolase, pyrimidine binding domain C4J88_RS01950 PF00456 Transketolase, thiamine diphosphate binding domain C4J88_RS01950 PF02780 Transketolase, C-terminal domain C4J88_RS01955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4J88_RS01955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4J88_RS01960 PF00162 Phosphoglycerate kinase C4J88_RS01975 PF01116 Fructose-bisphosphate aldolase class-II C4J88_RS01990 PF00563 EAL domain C4J88_RS01990 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS01990 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS01995 PF01863 Protein of unknown function DUF45 C4J88_RS02005 PF13673 Acetyltransferase (GNAT) domain C4J88_RS02015 PF12805 FUSC-like inner membrane protein yccS C4J88_RS02025 PF00270 DEAD/DEAH box helicase C4J88_RS02025 PF03880 DbpA RNA binding domain C4J88_RS02025 PF00271 Helicase conserved C-terminal domain C4J88_RS02030 PF07690 Major Facilitator Superfamily C4J88_RS02035 PF00561 alpha/beta hydrolase fold C4J88_RS02050 PF00732 GMC oxidoreductase C4J88_RS02050 PF05199 GMC oxidoreductase C4J88_RS02055 PF00171 Aldehyde dehydrogenase family C4J88_RS02060 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS02060 PF13977 BetI-type transcriptional repressor, C-terminal C4J88_RS02065 PF02028 BCCT, betaine/carnitine/choline family transporter C4J88_RS02070 PF00005 ABC transporter C4J88_RS02070 PF00571 CBS domain C4J88_RS02075 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS02080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J88_RS02085 PF03313 Serine dehydratase alpha chain C4J88_RS02085 PF03315 Serine dehydratase beta chain C4J88_RS02090 PF07690 Major Facilitator Superfamily C4J88_RS02095 PF03466 LysR substrate binding domain C4J88_RS02095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS02125 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J88_RS02125 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J88_RS02135 PF08241 Methyltransferase domain C4J88_RS02140 PF01494 FAD binding domain C4J88_RS02160 PF00221 Aromatic amino acid lyase C4J88_RS02175 PF07977 FabA-like domain C4J88_RS02185 PF00550 Phosphopantetheine attachment site C4J88_RS02190 PF00550 Phosphopantetheine attachment site C4J88_RS02205 PF13614 AAA domain C4J88_RS02215 PF00085 Thioredoxin C4J88_RS02225 PF01381 Helix-turn-helix C4J88_RS02230 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C4J88_RS02235 PF12794 Mechanosensitive ion channel inner membrane domain 1 C4J88_RS02235 PF12795 Mechanosensitive ion channel porin domain C4J88_RS02235 PF00924 Mechanosensitive ion channel C4J88_RS02240 PF03471 Transporter associated domain C4J88_RS02240 PF00999 Sodium/hydrogen exchanger family C4J88_RS02240 PF02080 TrkA-C domain C4J88_RS02245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS02245 PF00672 HAMP domain C4J88_RS02245 PF12729 Four helix bundle sensory module for signal transduction C4J88_RS02260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS02260 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J88_RS02260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS02260 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS02265 PF01619 Proline dehydrogenase C4J88_RS02265 PF00171 Aldehyde dehydrogenase family C4J88_RS02265 PF14850 DNA-binding domain of Proline dehydrogenase C4J88_RS02265 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C4J88_RS02275 PF00474 Sodium:solute symporter family C4J88_RS02280 PF04717 Type VI secretion system, phage-baseplate injector C4J88_RS02290 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C4J88_RS02295 PF01625 Peptide methionine sulfoxide reductase C4J88_RS02300 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS02300 PF00563 EAL domain C4J88_RS02300 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS02305 PF02817 e3 binding domain C4J88_RS02305 PF00364 Biotin-requiring enzyme C4J88_RS02305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4J88_RS02310 PF00456 Transketolase, thiamine diphosphate binding domain C4J88_RS02310 PF17831 Pyruvate dehydrogenase E1 component middle domain C4J88_RS02315 PF03710 Glutamate-ammonia ligase adenylyltransferase C4J88_RS02315 PF08335 GlnD PII-uridylyltransferase C4J88_RS02320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4J88_RS02325 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4J88_RS02330 PF13439 Glycosyltransferase Family 4 C4J88_RS02330 PF00534 Glycosyl transferases group 1 C4J88_RS02355 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS02355 PF00593 TonB dependent receptor C4J88_RS02365 PF16861 Carbamoyltransferase C-terminus C4J88_RS02365 PF02543 Carbamoyltransferase N-terminus C4J88_RS02380 PF00534 Glycosyl transferases group 1 C4J88_RS02380 PF13579 Glycosyl transferase 4-like domain C4J88_RS02385 PF00535 Glycosyl transferase family 2 C4J88_RS02390 PF04932 O-Antigen ligase C4J88_RS02395 PF00005 ABC transporter C4J88_RS02395 PF00664 ABC transporter transmembrane region C4J88_RS02400 PF00294 pfkB family carbohydrate kinase C4J88_RS02400 PF01467 Cytidylyltransferase-like C4J88_RS02410 PF00248 Aldo/keto reductase family C4J88_RS02415 PF01266 FAD dependent oxidoreductase C4J88_RS02420 PF00893 Small Multidrug Resistance protein C4J88_RS02425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS02425 PF03466 LysR substrate binding domain C4J88_RS02430 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C4J88_RS02435 PF02321 Outer membrane efflux protein C4J88_RS02440 PF01964 Radical SAM ThiC family C4J88_RS02440 PF13667 ThiC-associated domain C4J88_RS02455 PF00293 NUDIX domain C4J88_RS02465 PF00149 Calcineurin-like phosphoesterase C4J88_RS02475 PF07690 Major Facilitator Superfamily C4J88_RS02485 PF05728 Uncharacterised protein family (UPF0227) C4J88_RS02490 PF01751 Toprim domain C4J88_RS02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS02490 PF00986 DNA gyrase B subunit, carboxyl terminus C4J88_RS02490 PF00204 DNA gyrase B C4J88_RS02500 PF00521 DNA gyrase/topoisomerase IV, subunit A C4J88_RS02500 PF03989 DNA gyrase C-terminal domain, beta-propeller C4J88_RS02520 PF02666 Phosphatidylserine decarboxylase C4J88_RS02535 PF01618 MotA/TolQ/ExbB proton channel family C4J88_RS02540 PF00691 OmpA family C4J88_RS02540 PF13677 Membrane MotB of proton-channel complex MotA/MotB C4J88_RS02550 PF03193 RsgA GTPase C4J88_RS02555 PF00929 Exonuclease C4J88_RS02560 PF03458 UPF0126 domain C4J88_RS02565 PF08331 Domain of unknown function (DUF1730) C4J88_RS02570 PF01256 Carbohydrate kinase C4J88_RS02570 PF03853 YjeF-related protein N-terminus C4J88_RS02575 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C4J88_RS02580 PF11741 AMIN domain C4J88_RS02580 PF01520 N-acetylmuramoyl-L-alanine amidase C4J88_RS02585 PF08676 MutL C terminal dimerisation domain C4J88_RS02585 PF01119 DNA mismatch repair protein, C-terminal domain C4J88_RS02595 PF17209 Hfq protein C4J88_RS02600 PF16360 GTP-binding GTPase Middle Region C4J88_RS02600 PF13167 GTP-binding GTPase N-terminal C4J88_RS02600 PF01926 50S ribosome-binding GTPase C4J88_RS02605 PF01145 SPFH domain / Band 7 family C4J88_RS02610 PF01145 SPFH domain / Band 7 family C4J88_RS02615 PF13393 Histidyl-tRNA synthetase C4J88_RS02620 PF00709 Adenylosuccinate synthetase C4J88_RS02625 PF00672 HAMP domain C4J88_RS02625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS02625 PF17200 Single Cache domain 2 C4J88_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS02635 PF01547 Bacterial extracellular solute-binding protein C4J88_RS02650 PF17876 Cold shock domain C4J88_RS02650 PF00773 RNB domain C4J88_RS02650 PF08206 Ribonuclease B OB domain C4J88_RS02650 PF00575 S1 RNA binding domain C4J88_RS02650 PF08461 Ribonuclease R winged-helix domain C4J88_RS02655 PF00588 SpoU rRNA Methylase family C4J88_RS02655 PF08032 RNA 2'-O ribose methyltransferase substrate binding C4J88_RS02660 PF01250 Ribosomal protein S6 C4J88_RS02665 PF01084 Ribosomal protein S18 C4J88_RS02675 PF01281 Ribosomal protein L9, N-terminal domain C4J88_RS02675 PF03948 Ribosomal protein L9, C-terminal domain C4J88_RS02680 PF00772 DnaB-like helicase N terminal domain C4J88_RS02680 PF03796 DnaB-like helicase C terminal domain C4J88_RS02690 PF08497 Radical SAM N-terminal C4J88_RS02690 PF11842 Domain of unknown function (DUF3362) C4J88_RS02690 PF04055 Radical SAM superfamily C4J88_RS02720 PF04168 A predicted alpha-helical domain with a conserved ER motif. C4J88_RS02720 PF14403 Circularly permuted ATP-grasp type 2 C4J88_RS02740 PF00127 Copper binding proteins, plastocyanin/azurin family C4J88_RS02745 PF02540 NAD synthase C4J88_RS02750 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C4J88_RS02750 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C4J88_RS02755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS02755 PF03466 LysR substrate binding domain C4J88_RS02760 PF00171 Aldehyde dehydrogenase family C4J88_RS02765 PF01266 FAD dependent oxidoreductase C4J88_RS02770 PF13458 Periplasmic binding protein C4J88_RS02775 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS02780 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS02780 PF11862 Domain of unknown function (DUF3382) C4J88_RS02785 PF00005 ABC transporter C4J88_RS02785 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J88_RS02790 PF00005 ABC transporter C4J88_RS02800 PF00106 short chain dehydrogenase C4J88_RS02815 PF04955 HupE / UreJ protein C4J88_RS02820 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J88_RS02825 PF01730 UreF C4J88_RS02830 PF05194 UreE urease accessory protein, C-terminal domain C4J88_RS02830 PF02814 UreE urease accessory protein, N-terminal domain C4J88_RS02835 PF00877 NlpC/P60 family C4J88_RS02840 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS02850 PF05170 AsmA family C4J88_RS02860 PF07769 psiF repeat C4J88_RS02870 PF00012 Hsp70 protein C4J88_RS02875 PF01556 DnaJ C terminal domain C4J88_RS02875 PF00226 DnaJ domain C4J88_RS02880 PF01979 Amidohydrolase family C4J88_RS02880 PF00449 Urease alpha-subunit, N-terminal domain C4J88_RS02885 PF00699 Urease beta subunit C4J88_RS02890 PF13673 Acetyltransferase (GNAT) domain C4J88_RS02900 PF00547 Urease, gamma subunit C4J88_RS02905 PF01774 UreD urease accessory protein C4J88_RS02910 PF00005 ABC transporter C4J88_RS02915 PF00005 ABC transporter C4J88_RS02915 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J88_RS02925 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS02930 PF02954 Bacterial regulatory protein, Fis family C4J88_RS02930 PF00158 Sigma-54 interaction domain C4J88_RS02930 PF13188 PAS domain C4J88_RS02985 PF02571 Precorrin-6x reductase CbiJ/CobK C4J88_RS02990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J88_RS02995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4J88_RS02995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4J88_RS03000 PF02570 Precorrin-8X methylmutase C4J88_RS03005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J88_RS03010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J88_RS03020 PF01914 MarC family integral membrane protein C4J88_RS03025 PF00072 Response regulator receiver domain C4J88_RS03025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J88_RS03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS03025 PF00672 HAMP domain C4J88_RS03025 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS03025 PF01627 Hpt domain C4J88_RS03030 PF02844 Phosphoribosylglycinamide synthetase, N domain C4J88_RS03030 PF02843 Phosphoribosylglycinamide synthetase, C domain C4J88_RS03030 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C4J88_RS03035 PF02142 MGS-like domain C4J88_RS03035 PF01808 AICARFT/IMPCHase bienzyme C4J88_RS03040 PF02954 Bacterial regulatory protein, Fis family C4J88_RS03045 PF01207 Dihydrouridine synthase (Dus) C4J88_RS03070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J88_RS03070 PF00289 Biotin carboxylase, N-terminal domain C4J88_RS03070 PF02785 Biotin carboxylase C-terminal domain C4J88_RS03075 PF00364 Biotin-requiring enzyme C4J88_RS03080 PF01220 Dehydroquinase class II C4J88_RS03085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS03090 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS03090 PF00072 Response regulator receiver domain C4J88_RS03100 PF00293 NUDIX domain C4J88_RS03105 PF01253 Translation initiation factor SUI1 C4J88_RS03110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4J88_RS03110 PF17810 Arginine decarboxylase helical bundle domain C4J88_RS03110 PF17944 Arginine decarboxylase C-terminal helical extension C4J88_RS03115 PF01554 MatE C4J88_RS03120 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C4J88_RS03120 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C4J88_RS03120 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C4J88_RS03120 PF07703 Alpha-2-macroglobulin bait region domain C4J88_RS03120 PF00207 Alpha-2-macroglobulin family C4J88_RS03120 PF17962 Bacterial macroglobulin domain 6 C4J88_RS03120 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C4J88_RS03120 PF07678 A-macroglobulin TED domain C4J88_RS03120 PF01835 MG2 domain C4J88_RS03130 PF06832 Penicillin-Binding Protein C-terminus Family C4J88_RS03130 PF00912 Transglycosylase C4J88_RS03130 PF00905 Penicillin binding protein transpeptidase domain C4J88_RS03140 PF13847 Methyltransferase domain C4J88_RS03165 PF00108 Thiolase, N-terminal domain C4J88_RS03165 PF02803 Thiolase, C-terminal domain C4J88_RS03175 PF09278 MerR, DNA binding C4J88_RS03175 PF00376 MerR family regulatory protein C4J88_RS03180 PF00403 Heavy-metal-associated domain C4J88_RS03195 PF07690 Major Facilitator Superfamily C4J88_RS03200 PF00107 Zinc-binding dehydrogenase C4J88_RS03200 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS03205 PF03992 Antibiotic biosynthesis monooxygenase C4J88_RS03210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS03210 PF03466 LysR substrate binding domain C4J88_RS03220 PF07690 Major Facilitator Superfamily C4J88_RS03225 PF00962 Adenosine/AMP deaminase C4J88_RS03230 PF01699 Sodium/calcium exchanger protein C4J88_RS03235 PF01979 Amidohydrolase family C4J88_RS03245 PF01205 Uncharacterized protein family UPF0029 C4J88_RS03250 PF08362 YcdC-like protein, C-terminal region C4J88_RS03250 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS03260 PF03466 LysR substrate binding domain C4J88_RS03260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS03265 PF00202 Aminotransferase class-III C4J88_RS03270 PF00171 Aldehyde dehydrogenase family C4J88_RS03305 PF04403 Paraquat-inducible protein A C4J88_RS03310 PF04403 Paraquat-inducible protein A C4J88_RS03315 PF02470 MlaD protein C4J88_RS03340 PF00583 Acetyltransferase (GNAT) family C4J88_RS03350 PF00484 Carbonic anhydrase C4J88_RS03360 PF04185 Phosphoesterase family C4J88_RS03375 PF02667 Short chain fatty acid transporter C4J88_RS03380 PF08946 Osmosensory transporter coiled coil C4J88_RS03380 PF00083 Sugar (and other) transporter C4J88_RS03385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS03385 PF08447 PAS fold C4J88_RS03385 PF13426 PAS domain C4J88_RS03415 PF08281 Sigma-70, region 4 C4J88_RS03415 PF04542 Sigma-70 region 2 C4J88_RS03425 PF00771 FHIPEP family C4J88_RS03435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J88_RS03435 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J88_RS03435 PF18269 T3SS EscN ATPase C-terminal domain C4J88_RS03450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J88_RS03455 PF00813 FliP family C4J88_RS03460 PF01313 Bacterial export proteins, family 3 C4J88_RS03465 PF01311 Bacterial export proteins, family 1 C4J88_RS03470 PF01312 FlhB HrpN YscU SpaS Family C4J88_RS03485 PF03958 Bacterial type II/III secretion system short domain C4J88_RS03485 PF00263 Bacterial type II and III secretion system protein C4J88_RS03505 PF01514 Secretory protein of YscJ/FliF family C4J88_RS03520 PF02954 Bacterial regulatory protein, Fis family C4J88_RS03520 PF00158 Sigma-54 interaction domain C4J88_RS03525 PF01926 50S ribosome-binding GTPase C4J88_RS03525 PF06071 Protein of unknown function (DUF933) C4J88_RS03530 PF01195 Peptidyl-tRNA hydrolase C4J88_RS03535 PF14693 Ribosomal protein TL5, C-terminal domain C4J88_RS03535 PF01386 Ribosomal L25p family C4J88_RS03540 PF14572 Phosphoribosyl synthetase-associated domain C4J88_RS03540 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C4J88_RS03550 PF00288 GHMP kinases N terminal domain C4J88_RS03550 PF08544 GHMP kinases C terminal C4J88_RS03555 PF03550 Outer membrane lipoprotein LolB C4J88_RS03565 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C4J88_RS03565 PF01488 Shikimate / quinate 5-dehydrogenase C4J88_RS03565 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C4J88_RS03570 PF03462 PCRF domain C4J88_RS03570 PF00472 RF-1 domain C4J88_RS03575 PF05175 Methyltransferase small domain C4J88_RS03575 PF17827 PrmC N-terminal domain C4J88_RS03580 PF00899 ThiF family C4J88_RS03585 PF01177 Asp/Glu/Hydantoin racemase C4J88_RS03590 PF09411 Lipid A 3-O-deacylase (PagL) C4J88_RS03620 PF00106 short chain dehydrogenase C4J88_RS03625 PF00875 DNA photolyase C4J88_RS03625 PF03441 FAD binding domain of DNA photolyase C4J88_RS03630 PF13411 MerR HTH family regulatory protein C4J88_RS03645 PF01593 Flavin containing amine oxidoreductase C4J88_RS03650 PF01370 NAD dependent epimerase/dehydratase family C4J88_RS03650 PF08338 Domain of unknown function (DUF1731) C4J88_RS03655 PF00762 Ferrochelatase C4J88_RS03660 PF00593 TonB dependent receptor C4J88_RS03660 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS03665 PF13180 PDZ domain C4J88_RS03670 PF01784 NIF3 (NGG1p interacting factor 3) C4J88_RS03675 PF01507 Phosphoadenosine phosphosulfate reductase family C4J88_RS03680 PF00009 Elongation factor Tu GTP binding domain C4J88_RS03685 PF01553 Acyltransferase C4J88_RS03690 PF07085 DRTGG domain C4J88_RS03690 PF01515 Phosphate acetyl/butaryl transferase C4J88_RS03700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J88_RS03705 PF01649 Ribosomal protein S20 C4J88_RS03710 PF03023 Lipid II flippase MurJ C4J88_RS03715 PF01687 Riboflavin kinase C4J88_RS03715 PF06574 FAD synthetase C4J88_RS03720 PF06827 Zinc finger found in FPG and IleRS C4J88_RS03720 PF00133 tRNA synthetases class I (I, L, M and V) C4J88_RS03720 PF08264 Anticodon-binding domain of tRNA C4J88_RS03725 PF01252 Signal peptidase (SPase) II C4J88_RS03730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J88_RS03735 PF02401 LytB protein C4J88_RS03740 PF08334 Type II secretion system (T2SS), protein G C4J88_RS03740 PF07963 Prokaryotic N-terminal methylation motif C4J88_RS03760 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor C4J88_RS03760 PF07963 Prokaryotic N-terminal methylation motif C4J88_RS03765 PF01266 FAD dependent oxidoreductase C4J88_RS03775 PF13525 Outer membrane lipoprotein C4J88_RS03780 PF01479 S4 domain C4J88_RS03780 PF00849 RNA pseudouridylate synthase C4J88_RS03785 PF02578 Multi-copper polyphenol oxidoreductase laccase C4J88_RS03790 PF10431 C-terminal, D2-small domain, of ClpB protein C4J88_RS03790 PF02861 Clp amino terminal domain, pathogenicity island component C4J88_RS03790 PF17871 AAA lid domain C4J88_RS03790 PF07724 AAA domain (Cdc48 subfamily) C4J88_RS03790 PF00004 ATPase family associated with various cellular activities (AAA) C4J88_RS03815 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS03840 PF03884 DNA gyrase inhibitor YacG C4J88_RS03845 PF01121 Dephospho-CoA kinase C4J88_RS03850 PF06750 Bacterial Peptidase A24 N-terminal domain C4J88_RS03850 PF01478 Type IV leader peptidase family C4J88_RS03855 PF00482 Type II secretion system (T2SS), protein F C4J88_RS03860 PF00114 Pilin (bacterial filament) C4J88_RS03860 PF07963 Prokaryotic N-terminal methylation motif C4J88_RS03875 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C4J88_RS03875 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C4J88_RS03885 PF01510 N-acetylmuramoyl-L-alanine amidase C4J88_RS03895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS03895 PF00672 HAMP domain C4J88_RS03905 PF01026 TatD related DNase C4J88_RS03910 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J88_RS03910 PF00356 Bacterial regulatory proteins, lacI family C4J88_RS03915 PF00391 PEP-utilising enzyme, mobile domain C4J88_RS03915 PF02896 PEP-utilising enzyme, TIM barrel domain C4J88_RS03915 PF00381 PTS HPr component phosphorylation site C4J88_RS03915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C4J88_RS03915 PF05524 PEP-utilising enzyme, N-terminal C4J88_RS03920 PF00294 pfkB family carbohydrate kinase C4J88_RS03925 PF02378 Phosphotransferase system, EIIC C4J88_RS03925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C4J88_RS03930 PF16655 PhoD-like phosphatase, N-terminal domain C4J88_RS03930 PF09423 PhoD-like phosphatase C4J88_RS03935 PF00258 Flavodoxin C4J88_RS03935 PF00175 Oxidoreductase NAD-binding domain C4J88_RS03935 PF00667 FAD binding domain C4J88_RS03940 PF00593 TonB dependent receptor C4J88_RS03940 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS03945 PF18331 PKHD-type hydroxylase C-terminal domain C4J88_RS03945 PF13640 2OG-Fe(II) oxygenase superfamily C4J88_RS03960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4J88_RS03960 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4J88_RS03965 PF00571 CBS domain C4J88_RS03965 PF00005 ABC transporter C4J88_RS03970 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS03975 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J88_RS03980 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS03985 PF00009 Elongation factor Tu GTP binding domain C4J88_RS03985 PF03144 Elongation factor Tu domain 2 C4J88_RS03985 PF16658 Class II release factor RF3, C-terminal domain C4J88_RS03990 PF13614 AAA domain C4J88_RS04015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J88_RS04015 PF00005 ABC transporter C4J88_RS04020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J88_RS04020 PF00005 ABC transporter C4J88_RS04025 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS04025 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J88_RS04030 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS04035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J88_RS04040 PF03573 outer membrane porin, OprD family C4J88_RS04045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J88_RS04050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J88_RS04055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J88_RS04075 PF00072 Response regulator receiver domain C4J88_RS04075 PF02954 Bacterial regulatory protein, Fis family C4J88_RS04080 PF00005 ABC transporter C4J88_RS04080 PF06472 ABC transporter transmembrane region 2 C4J88_RS04095 PF00579 tRNA synthetases class I (W and Y) C4J88_RS04100 PF03969 AFG1-like ATPase C4J88_RS04110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS04110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS04110 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS04120 PF00248 Aldo/keto reductase family C4J88_RS04125 PF00572 Ribosomal protein L13 C4J88_RS04130 PF00380 Ribosomal protein S9/S16 C4J88_RS04135 PF00355 Rieske [2Fe-2S] domain C4J88_RS04135 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C4J88_RS04140 PF00033 Cytochrome b/b6/petB C4J88_RS04140 PF00032 Cytochrome b(C-terminal)/b6/petD C4J88_RS04145 PF02167 Cytochrome C1 family C4J88_RS04150 PF00043 Glutathione S-transferase, C-terminal domain C4J88_RS04150 PF02798 Glutathione S-transferase, N-terminal domain C4J88_RS04155 PF04386 Stringent starvation protein B C4J88_RS04160 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS04160 PF07729 FCD domain C4J88_RS04170 PF00701 Dihydrodipicolinate synthetase family C4J88_RS04175 PF00171 Aldehyde dehydrogenase family C4J88_RS04180 PF07690 Major Facilitator Superfamily C4J88_RS04185 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C4J88_RS04185 PF08666 SAF domain C4J88_RS04195 PF01699 Sodium/calcium exchanger protein C4J88_RS04200 PF05036 Sporulation related domain C4J88_RS04200 PF03330 Lytic transglycolase C4J88_RS04205 PF02637 GatB domain C4J88_RS04205 PF02934 GatB/GatE catalytic domain C4J88_RS04210 PF01425 Amidase C4J88_RS04215 PF02686 Glu-tRNAGln amidotransferase C subunit C4J88_RS04225 PF04085 rod shape-determining protein MreC C4J88_RS04235 PF02545 Maf-like protein C4J88_RS04240 PF10150 Ribonuclease E/G family C4J88_RS04240 PF00575 S1 RNA binding domain C4J88_RS04250 PF00795 Carbon-nitrogen hydrolase C4J88_RS04255 PF01523 Putative modulator of DNA gyrase C4J88_RS04260 PF04751 Protein of unknown function (DUF615) C4J88_RS04265 PF01523 Putative modulator of DNA gyrase C4J88_RS04275 PF00206 Lyase C4J88_RS04275 PF10415 Fumarase C C-terminus C4J88_RS04285 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C4J88_RS04285 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C4J88_RS04290 PF02535 ZIP Zinc transporter C4J88_RS04295 PF00381 PTS HPr component phosphorylation site C4J88_RS04300 PF03668 P-loop ATPase protein family C4J88_RS04305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C4J88_RS04310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C4J88_RS04315 PF04963 Sigma-54 factor, core binding domain C4J88_RS04315 PF04552 Sigma-54, DNA binding domain C4J88_RS04315 PF00309 Sigma-54 factor, Activator interacting domain (AID) C4J88_RS04320 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J88_RS04320 PF00005 ABC transporter C4J88_RS04325 PF03968 OstA-like protein C4J88_RS04340 PF00571 CBS domain C4J88_RS04340 PF01380 SIS domain C4J88_RS04345 PF00005 ABC transporter C4J88_RS04350 PF02405 Permease MlaE C4J88_RS04355 PF02470 MlaD protein C4J88_RS04360 PF05494 MlaC protein C4J88_RS04375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4J88_RS04380 PF01634 ATP phosphoribosyltransferase C4J88_RS04385 PF00815 Histidinol dehydrogenase C4J88_RS04390 PF00155 Aminotransferase class I and II C4J88_RS04395 PF00860 Permease family C4J88_RS04405 PF00156 Phosphoribosyl transferase domain C4J88_RS04420 PF06039 Malate:quinone oxidoreductase (Mqo) C4J88_RS04460 PF02586 SOS response associated peptidase (SRAP) C4J88_RS04465 PF01435 Peptidase family M48 C4J88_RS04470 PF01169 Uncharacterized protein family UPF0016 C4J88_RS04475 PF05175 Methyltransferase small domain C4J88_RS04475 PF08468 Methyltransferase small domain N-terminal C4J88_RS04480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS04480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J88_RS04485 PF01810 LysE type translocator C4J88_RS04490 PF00501 AMP-binding enzyme C4J88_RS04490 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS04500 PF07044 Protein of unknown function (DUF1329) C4J88_RS04505 PF13191 AAA ATPase domain C4J88_RS04505 PF00069 Protein kinase domain C4J88_RS04515 PF02470 MlaD protein C4J88_RS04520 PF04403 Paraquat-inducible protein A C4J88_RS04535 PF13488 Glycine zipper C4J88_RS04535 PF00691 OmpA family C4J88_RS04540 PF04972 BON domain C4J88_RS04545 PF13580 SIS domain C4J88_RS04550 PF02021 Uncharacterised protein family UPF0102 C4J88_RS04555 PF04348 LppC putative lipoprotein C4J88_RS04560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J88_RS04570 PF02381 MraZ protein, putative antitoxin-like C4J88_RS04575 PF01795 MraW methylase family C4J88_RS04580 PF04999 Cell division protein FtsL C4J88_RS04585 PF03717 Penicillin-binding Protein dimerisation domain C4J88_RS04585 PF00905 Penicillin binding protein transpeptidase domain C4J88_RS04590 PF08245 Mur ligase middle domain C4J88_RS04590 PF02875 Mur ligase family, glutamate ligase domain C4J88_RS04590 PF01225 Mur ligase family, catalytic domain C4J88_RS04595 PF02875 Mur ligase family, glutamate ligase domain C4J88_RS04595 PF01225 Mur ligase family, catalytic domain C4J88_RS04595 PF08245 Mur ligase middle domain C4J88_RS04600 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C4J88_RS04600 PF00953 Glycosyl transferase family 4 C4J88_RS04605 PF02875 Mur ligase family, glutamate ligase domain C4J88_RS04605 PF08245 Mur ligase middle domain C4J88_RS04610 PF01098 Cell cycle protein C4J88_RS04615 PF03033 Glycosyltransferase family 28 N-terminal domain C4J88_RS04615 PF04101 Glycosyltransferase family 28 C-terminal domain C4J88_RS04620 PF01225 Mur ligase family, catalytic domain C4J88_RS04620 PF08245 Mur ligase middle domain C4J88_RS04620 PF02875 Mur ligase family, glutamate ligase domain C4J88_RS04625 PF01820 D-ala D-ala ligase N-terminus C4J88_RS04625 PF07478 D-ala D-ala ligase C-terminus C4J88_RS04630 PF03799 Cell division protein FtsQ C4J88_RS04630 PF08478 POTRA domain, FtsQ-type C4J88_RS04635 PF02491 SHS2 domain inserted in FTSA C4J88_RS04640 PF00091 Tubulin/FtsZ family, GTPase domain C4J88_RS04640 PF12327 FtsZ family, C-terminal domain C4J88_RS04645 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C4J88_RS04650 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS04650 PF00360 Phytochrome region C4J88_RS04650 PF00563 EAL domain C4J88_RS04650 PF01590 GAF domain C4J88_RS04655 PF03573 outer membrane porin, OprD family C4J88_RS04660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS04660 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS04660 PF00672 HAMP domain C4J88_RS04665 PF00072 Response regulator receiver domain C4J88_RS04665 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS04670 PF00873 AcrB/AcrD/AcrF family C4J88_RS04675 PF13533 Biotin-lipoyl like C4J88_RS04685 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS04700 PF00072 Response regulator receiver domain C4J88_RS04700 PF01584 CheW-like domain C4J88_RS04705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J88_RS04705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS04710 PF03466 LysR substrate binding domain C4J88_RS04710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS04715 PF02321 Outer membrane efflux protein C4J88_RS04720 PF04632 Fusaric acid resistance protein family C4J88_RS04730 PF00529 HlyD membrane-fusion protein of T1SS C4J88_RS04730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J88_RS04750 PF00106 short chain dehydrogenase C4J88_RS04760 PF01050 Mannose-6-phosphate isomerase C4J88_RS04760 PF00483 Nucleotidyl transferase C4J88_RS04765 PF11182 Alginate O-acetyl transferase AlgF C4J88_RS04770 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX C4J88_RS04775 PF03062 MBOAT, membrane-bound O-acyltransferase family C4J88_RS04780 PF05426 Alginate lyase C4J88_RS04785 PF16824 C-terminal carbohydrate-binding module C4J88_RS04785 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX C4J88_RS04790 PF05048 Periplasmic copper-binding protein (NosD) C4J88_RS04795 PF13372 Alginate export C4J88_RS04800 PF08238 Sel1 repeat C4J88_RS04805 PF07238 PilZ domain C4J88_RS04820 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4J88_RS04820 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4J88_RS04820 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4J88_RS04825 PF03883 Peroxide stress protein YaaA C4J88_RS04835 PF02562 PhoH-like protein C4J88_RS04835 PF13638 PIN domain C4J88_RS04845 PF01967 MoaC family C4J88_RS04850 PF02597 ThiS family C4J88_RS04855 PF02391 MoaE protein C4J88_RS04870 PF00270 DEAD/DEAH box helicase C4J88_RS04870 PF00271 Helicase conserved C-terminal domain C4J88_RS04875 PF02230 Phospholipase/Carboxylesterase C4J88_RS04880 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS04885 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS04890 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS04895 PF00005 ABC transporter C4J88_RS04905 PF15723 Motility quorum-sensing regulator, toxin of MqsA C4J88_RS04910 PF07729 FCD domain C4J88_RS04910 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS04915 PF07690 Major Facilitator Superfamily C4J88_RS04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS04920 PF00072 Response regulator receiver domain C4J88_RS04920 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS04920 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS04920 PF00989 PAS fold C4J88_RS04920 PF01627 Hpt domain C4J88_RS04925 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS04925 PF00072 Response regulator receiver domain C4J88_RS04935 PF01541 GIY-YIG catalytic domain C4J88_RS04940 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS04945 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C4J88_RS04955 PF04209 homogentisate 1,2-dioxygenase C4J88_RS04960 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4J88_RS04965 PF13417 Glutathione S-transferase, N-terminal domain C4J88_RS04970 PF07690 Major Facilitator Superfamily C4J88_RS04975 PF13369 Transglutaminase-like superfamily C4J88_RS04980 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C4J88_RS04980 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C4J88_RS05000 PF06146 Phosphate-starvation-inducible E C4J88_RS05010 PF03313 Serine dehydratase alpha chain C4J88_RS05010 PF03315 Serine dehydratase beta chain C4J88_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS05015 PF03466 LysR substrate binding domain C4J88_RS05025 PF07690 Major Facilitator Superfamily C4J88_RS05030 PF03466 LysR substrate binding domain C4J88_RS05030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS05035 PF00593 TonB dependent receptor C4J88_RS05035 PF07660 Secretin and TonB N terminus short domain C4J88_RS05035 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS05040 PF16220 Domain of unknown function (DUF4880) C4J88_RS05040 PF04773 FecR protein C4J88_RS05045 PF08281 Sigma-70, region 4 C4J88_RS05045 PF04542 Sigma-70 region 2 C4J88_RS05080 PF04245 37-kD nucleoid-associated bacterial protein C4J88_RS05085 PF00216 Bacterial DNA-binding protein C4J88_RS05090 PF05971 RNA methyltransferase C4J88_RS05095 PF00133 tRNA synthetases class I (I, L, M and V) C4J88_RS05095 PF08264 Anticodon-binding domain of tRNA C4J88_RS05095 PF10458 Valyl tRNA synthetase tRNA binding arm C4J88_RS05105 PF04364 DNA polymerase III chi subunit, HolC C4J88_RS05110 PF02789 Cytosol aminopeptidase family, N-terminal domain C4J88_RS05110 PF00883 Cytosol aminopeptidase family, catalytic domain C4J88_RS05115 PF03739 Lipopolysaccharide export system permease LptF/LptG C4J88_RS05120 PF03739 Lipopolysaccharide export system permease LptF/LptG C4J88_RS05125 PF00679 Elongation factor G C-terminus C4J88_RS05125 PF00009 Elongation factor Tu GTP binding domain C4J88_RS05125 PF03144 Elongation factor Tu domain 2 C4J88_RS05125 PF06421 GTP-binding protein LepA C-terminus C4J88_RS05130 PF10502 Signal peptidase, peptidase S26 C4J88_RS05135 PF00035 Double-stranded RNA binding motif C4J88_RS05135 PF14622 Ribonuclease-III-like C4J88_RS05140 PF07650 KH domain C4J88_RS05140 PF01926 50S ribosome-binding GTPase C4J88_RS05145 PF02565 Recombination protein O C terminal C4J88_RS05145 PF11967 Recombination protein O N terminal C4J88_RS05150 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C4J88_RS05155 PF07732 Multicopper oxidase C4J88_RS05155 PF07731 Multicopper oxidase C4J88_RS05155 PF00394 Multicopper oxidase C4J88_RS05160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C4J88_RS05165 PF08003 Protein of unknown function (DUF1698) C4J88_RS05170 PF13649 Methyltransferase domain C4J88_RS05180 PF05362 Lon protease (S16) C-terminal proteolytic domain C4J88_RS05180 PF02190 ATP-dependent protease La (LON) substrate-binding domain C4J88_RS05180 PF00004 ATPase family associated with various cellular activities (AAA) C4J88_RS05190 PF01425 Amidase C4J88_RS05195 PF01522 Polysaccharide deacetylase C4J88_RS05205 PF07690 Major Facilitator Superfamily C4J88_RS05225 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J88_RS05225 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J88_RS05235 PF01011 PQQ enzyme repeat C4J88_RS05240 PF00593 TonB dependent receptor C4J88_RS05240 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS05245 PF09905 DNA-binding protein VF530 C4J88_RS05260 PF03551 Transcriptional regulator PadR-like family C4J88_RS05305 PF14496 C-terminal novel E3 ligase, LRR-interacting C4J88_RS05305 PF12468 Type III secretion system leucine rich repeat protein C4J88_RS05315 PF00324 Amino acid permease C4J88_RS05325 PF01645 Conserved region in glutamate synthase C4J88_RS05335 PF13188 PAS domain C4J88_RS05335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS05335 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS05335 PF08448 PAS fold C4J88_RS05335 PF00072 Response regulator receiver domain C4J88_RS05340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS05345 PF14376 Haem-binding domain C4J88_RS05345 PF00034 Cytochrome c C4J88_RS05345 PF03150 Di-haem cytochrome c peroxidase C4J88_RS05350 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS05350 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS05350 PF00563 EAL domain C4J88_RS05355 PF00072 Response regulator receiver domain C4J88_RS05360 PF00293 NUDIX domain C4J88_RS05375 PF03466 LysR substrate binding domain C4J88_RS05375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS05380 PF00561 alpha/beta hydrolase fold C4J88_RS05400 PF00892 EamA-like transporter family C4J88_RS05415 PF00202 Aminotransferase class-III C4J88_RS05420 PF12146 Serine aminopeptidase, S33 C4J88_RS05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS05430 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS05435 PF00072 Response regulator receiver domain C4J88_RS05435 PF02954 Bacterial regulatory protein, Fis family C4J88_RS05435 PF00158 Sigma-54 interaction domain C4J88_RS05440 PF06942 GlpM protein C4J88_RS05445 PF02954 Bacterial regulatory protein, Fis family C4J88_RS05445 PF00158 Sigma-54 interaction domain C4J88_RS05445 PF00072 Response regulator receiver domain C4J88_RS05450 PF02743 Cache domain C4J88_RS05450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS05450 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS05455 PF00005 ABC transporter C4J88_RS05460 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS05465 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS05470 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS05475 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C4J88_RS05475 PF01266 FAD dependent oxidoreductase C4J88_RS05480 PF00455 DeoR C terminal sensor domain C4J88_RS05480 PF08220 DeoR-like helix-turn-helix domain C4J88_RS05485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J88_RS05485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J88_RS05490 PF00230 Major intrinsic protein C4J88_RS05495 PF04073 Aminoacyl-tRNA editing domain C4J88_RS05500 PF00005 ABC transporter C4J88_RS05500 PF08402 TOBE domain C4J88_RS05505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4J88_RS05505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4J88_RS05515 PF00384 Molybdopterin oxidoreductase C4J88_RS05515 PF01568 Molydopterin dinucleotide binding domain C4J88_RS05515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4J88_RS05520 PF00462 Glutaredoxin C4J88_RS05525 PF00210 Ferritin-like domain C4J88_RS05530 PF04324 BFD-like [2Fe-2S] binding domain C4J88_RS05535 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4J88_RS05535 PF00578 AhpC/TSA family C4J88_RS05540 PF00929 Exonuclease C4J88_RS05545 PF01979 Amidohydrolase family C4J88_RS05555 PF00764 Arginosuccinate synthase C4J88_RS05560 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS05560 PF00072 Response regulator receiver domain C4J88_RS05570 PF00730 HhH-GPD superfamily base excision DNA repair protein C4J88_RS05570 PF00633 Helix-hairpin-helix motif C4J88_RS05570 PF10576 Iron-sulfur binding domain of endonuclease III C4J88_RS05575 PF04060 Putative Fe-S cluster C4J88_RS05580 PF01588 Putative tRNA binding domain C4J88_RS05580 PF09334 tRNA synthetases class I (M) C4J88_RS05585 PF10609 NUBPL iron-transfer P-loop NTPase C4J88_RS05590 PF11953 Domain of unknown function (DUF3470) C4J88_RS05590 PF00037 4Fe-4S binding domain C4J88_RS05595 PF00488 MutS domain V C4J88_RS05595 PF05190 MutS family domain IV C4J88_RS05595 PF01624 MutS domain I C4J88_RS05595 PF05188 MutS domain II C4J88_RS05595 PF05192 MutS domain III C4J88_RS05610 PF00717 Peptidase S24-like C4J88_RS05610 PF01381 Helix-turn-helix C4J88_RS05695 PF00182 Chitinase class I C4J88_RS05705 PF02464 Competence-damaged protein C4J88_RS05710 PF00154 recA bacterial DNA recombination protein C4J88_RS05715 PF02631 RecX family C4J88_RS05730 PF03942 DTW domain C4J88_RS05735 PF00072 Response regulator receiver domain C4J88_RS05735 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS05740 PF01219 Prokaryotic diacylglycerol kinase C4J88_RS05745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS05745 PF03466 LysR substrate binding domain C4J88_RS05750 PF00175 Oxidoreductase NAD-binding domain C4J88_RS05750 PF00970 Oxidoreductase FAD-binding domain C4J88_RS05755 PF01980 tRNA-methyltransferase O C4J88_RS05755 PF18389 TrmO C-terminal domain C4J88_RS05760 PF07308 Protein of unknown function (DUF1456) C4J88_RS05770 PF00117 Glutamine amidotransferase class-I C4J88_RS05770 PF00958 GMP synthase C terminal domain C4J88_RS05770 PF13673 Acetyltransferase (GNAT) domain C4J88_RS05770 PF03352 Methyladenine glycosylase C4J88_RS05770 PF13302 Acetyltransferase (GNAT) domain C4J88_RS05775 PF04055 Radical SAM superfamily C4J88_RS05775 PF00919 Uncharacterized protein family UPF0004 C4J88_RS05775 PF18693 TRAM domain C4J88_RS05805 PF00005 ABC transporter C4J88_RS05805 PF09383 NIL domain C4J88_RS05810 PF02705 K+ potassium transporter C4J88_RS05815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J88_RS05825 PF04349 Periplasmic glucan biosynthesis protein, MdoG C4J88_RS05835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS05835 PF00672 HAMP domain C4J88_RS05835 PF12729 Four helix bundle sensory module for signal transduction C4J88_RS05845 PF01739 CheR methyltransferase, SAM binding domain C4J88_RS05860 PF01339 CheB methylesterase C4J88_RS05860 PF00072 Response regulator receiver domain C4J88_RS05865 PF01590 GAF domain C4J88_RS05865 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS05865 PF00360 Phytochrome region C4J88_RS05865 PF00563 EAL domain C4J88_RS05875 PF00152 tRNA synthetases class II (D, K and N) C4J88_RS05875 PF01336 OB-fold nucleic acid binding domain C4J88_RS05890 PF12146 Serine aminopeptidase, S33 C4J88_RS05910 PF00691 OmpA family C4J88_RS05910 PF13488 Glycine zipper C4J88_RS05925 PF00311 Phosphoenolpyruvate carboxylase C4J88_RS05930 PF05191 Adenylate kinase, active site lid C4J88_RS05935 PF00814 Glycoprotease family C4J88_RS05945 PF01904 Protein of unknown function DUF72 C4J88_RS05965 PF04445 Putative SAM-dependent methyltransferase C4J88_RS05975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J88_RS05980 PF00873 AcrB/AcrD/AcrF family C4J88_RS06000 PF01553 Acyltransferase C4J88_RS06005 PF00313 'Cold-shock' DNA-binding domain C4J88_RS06015 PF13847 Methyltransferase domain C4J88_RS06020 PF07687 Peptidase dimerisation domain C4J88_RS06020 PF01546 Peptidase family M20/M25/M40 C4J88_RS06025 PF00535 Glycosyl transferase family 2 C4J88_RS06025 PF07238 PilZ domain C4J88_RS06025 PF03552 Cellulose synthase C4J88_RS06030 PF00899 ThiF family C4J88_RS06035 PF02657 Fe-S metabolism associated domain C4J88_RS06040 PF00266 Aminotransferase class-V C4J88_RS06045 PF14602 Hexapeptide repeat of succinyl-transferase C4J88_RS06045 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle C4J88_RS06050 PF03960 ArsC family C4J88_RS06055 PF00999 Sodium/hydrogen exchanger family C4J88_RS06065 PF00155 Aminotransferase class I and II C4J88_RS06070 PF01966 HD domain C4J88_RS06070 PF01842 ACT domain C4J88_RS06070 PF01909 Nucleotidyltransferase domain C4J88_RS06070 PF08335 GlnD PII-uridylyltransferase C4J88_RS06075 PF00557 Metallopeptidase family M24 C4J88_RS06080 PF00318 Ribosomal protein S2 C4J88_RS06085 PF00889 Elongation factor TS C4J88_RS06090 PF00696 Amino acid kinase family C4J88_RS06095 PF01765 Ribosome recycling factor C4J88_RS06100 PF01255 Putative undecaprenyl diphosphate synthase C4J88_RS06110 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C4J88_RS06110 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C4J88_RS06110 PF13288 DXP reductoisomerase C-terminal domain C4J88_RS06115 PF13180 PDZ domain C4J88_RS06115 PF02163 Peptidase family M50 C4J88_RS06115 PF17820 PDZ domain C4J88_RS06120 PF07244 Surface antigen variable number repeat C4J88_RS06120 PF01103 Surface antigen C4J88_RS06125 PF03938 Outer membrane protein (OmpH-like) C4J88_RS06130 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C4J88_RS06130 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS06135 PF07977 FabA-like domain C4J88_RS06140 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS06140 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C4J88_RS06145 PF02684 Lipid-A-disaccharide synthetase C4J88_RS06150 PF01351 Ribonuclease HII C4J88_RS06155 PF01336 OB-fold nucleic acid binding domain C4J88_RS06155 PF02811 PHP domain C4J88_RS06155 PF14579 Helix-hairpin-helix motif C4J88_RS06155 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C4J88_RS06155 PF07733 Bacterial DNA polymerase III alpha NTPase domain C4J88_RS06160 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C4J88_RS06165 PF01171 PP-loop family C4J88_RS06165 PF11734 TilS substrate C-terminal domain C4J88_RS06165 PF09179 TilS substrate binding domain C4J88_RS06170 PF00117 Glutamine amidotransferase class-I C4J88_RS06170 PF06418 CTP synthase N-terminus C4J88_RS06175 PF00793 DAHP synthetase I family C4J88_RS06180 PF00113 Enolase, C-terminal TIM barrel domain C4J88_RS06180 PF03952 Enolase, N-terminal domain C4J88_RS06185 PF04977 Septum formation initiator C4J88_RS06190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C4J88_RS06195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS06195 PF03466 LysR substrate binding domain C4J88_RS06200 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS06200 PF00107 Zinc-binding dehydrogenase C4J88_RS06205 PF00756 Putative esterase C4J88_RS06210 PF02542 YgbB family C4J88_RS06215 PF01142 tRNA pseudouridine synthase D (TruD) C4J88_RS06220 PF01975 Survival protein SurE C4J88_RS06230 PF01551 Peptidase family M23 C4J88_RS06230 PF01476 LysM domain C4J88_RS06235 PF00140 Sigma-70 factor, region 1.2 C4J88_RS06235 PF04542 Sigma-70 region 2 C4J88_RS06235 PF04545 Sigma-70, region 4 C4J88_RS06235 PF04539 Sigma-70 region 3 C4J88_RS06240 PF00313 'Cold-shock' DNA-binding domain C4J88_RS06245 PF00692 dUTPase C4J88_RS06260 PF00271 Helicase conserved C-terminal domain C4J88_RS06260 PF00270 DEAD/DEAH box helicase C4J88_RS06260 PF08494 DEAD/H associated C4J88_RS06265 PF00005 ABC transporter C4J88_RS06275 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS06285 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS06290 PF04675 DNA ligase N terminus C4J88_RS06290 PF01068 ATP dependent DNA ligase domain C4J88_RS06290 PF04679 ATP dependent DNA ligase C terminal region C4J88_RS06300 PF01804 Penicillin amidase C4J88_RS06305 PF07517 SecA DEAD-like domain C4J88_RS06305 PF07516 SecA Wing and Scaffold domain C4J88_RS06305 PF01043 SecA preprotein cross-linking domain C4J88_RS06305 PF02810 SEC-C motif C4J88_RS06315 PF02810 SEC-C motif C4J88_RS06335 PF13307 Helicase C-terminal domain C4J88_RS06335 PF06733 DEAD_2 C4J88_RS06340 PF17992 Agarase CBM like domain C4J88_RS06340 PF02449 Beta-galactosidase C4J88_RS06345 PF00144 Beta-lactamase C4J88_RS06350 PF04972 BON domain C4J88_RS06350 PF00691 OmpA family C4J88_RS06355 PF01243 Pyridoxamine 5'-phosphate oxidase C4J88_RS06355 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C4J88_RS06365 PF06965 Na+/H+ antiporter 1 C4J88_RS06390 PF03466 LysR substrate binding domain C4J88_RS06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS06405 PF05114 Protein of unknown function (DUF692) C4J88_RS06415 PF00005 ABC transporter C4J88_RS06420 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J88_RS06420 PF00005 ABC transporter C4J88_RS06425 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS06425 PF11862 Domain of unknown function (DUF3382) C4J88_RS06430 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS06435 PF13458 Periplasmic binding protein C4J88_RS06450 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS06450 PF00563 EAL domain C4J88_RS06450 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS06455 PF03692 Putative zinc- or iron-chelating domain C4J88_RS06460 PF07690 Major Facilitator Superfamily C4J88_RS06465 PF00271 Helicase conserved C-terminal domain C4J88_RS06465 PF12137 RNA polymerase recycling family C-terminal C4J88_RS06465 PF00176 SNF2 family N-terminal domain C4J88_RS06465 PF18339 RapA N-terminal Tudor like domain 1 C4J88_RS06465 PF18337 RapA N-terminal Tudor like domain C4J88_RS06475 PF01384 Phosphate transporter family C4J88_RS06485 PF09339 IclR helix-turn-helix domain C4J88_RS06485 PF01614 Bacterial transcriptional regulator C4J88_RS06490 PF07690 Major Facilitator Superfamily C4J88_RS06495 PF01144 Coenzyme A transferase C4J88_RS06500 PF01144 Coenzyme A transferase C4J88_RS06505 PF00108 Thiolase, N-terminal domain C4J88_RS06505 PF02803 Thiolase, C-terminal domain C4J88_RS06510 PF00775 Dioxygenase C4J88_RS06510 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C4J88_RS06515 PF00775 Dioxygenase C4J88_RS06520 PF00083 Sugar (and other) transporter C4J88_RS06525 PF10397 Adenylosuccinate lyase C-terminus C4J88_RS06525 PF00206 Lyase C4J88_RS06530 PF12146 Serine aminopeptidase, S33 C4J88_RS06535 PF02627 Carboxymuconolactone decarboxylase family C4J88_RS06545 PF03573 outer membrane porin, OprD family C4J88_RS06550 PF02321 Outer membrane efflux protein C4J88_RS06555 PF00873 AcrB/AcrD/AcrF family C4J88_RS06560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J88_RS06560 PF00529 HlyD membrane-fusion protein of T1SS C4J88_RS06565 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS06565 PF08361 MAATS-type transcriptional repressor, C-terminal region C4J88_RS06570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J88_RS06610 PF13091 PLD-like domain C4J88_RS06615 PF01915 Glycosyl hydrolase family 3 C-terminal domain C4J88_RS06615 PF14310 Fibronectin type III-like domain C4J88_RS06615 PF00933 Glycosyl hydrolase family 3 N terminal domain C4J88_RS06645 PF00465 Iron-containing alcohol dehydrogenase C4J88_RS06650 PF07690 Major Facilitator Superfamily C4J88_RS06655 PF00155 Aminotransferase class I and II C4J88_RS06665 PF02515 CoA-transferase family III C4J88_RS06675 PF03466 LysR substrate binding domain C4J88_RS06675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS06690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J88_RS06710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C4J88_RS06710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C4J88_RS06725 PF00561 alpha/beta hydrolase fold C4J88_RS06730 PF01479 S4 domain C4J88_RS06730 PF00849 RNA pseudouridylate synthase C4J88_RS06755 PF03167 Uracil DNA glycosylase superfamily C4J88_RS06765 PF01970 Tripartite tricarboxylate transporter TctA family C4J88_RS06780 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS06780 PF00072 Response regulator receiver domain C4J88_RS06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS06785 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS06795 PF01571 Aminomethyltransferase folate-binding domain C4J88_RS06800 PF03937 Flavinator of succinate dehydrogenase C4J88_RS06810 PF00890 FAD binding domain C4J88_RS06810 PF02910 Fumarate reductase flavoprotein C-term C4J88_RS06815 PF04542 Sigma-70 region 2 C4J88_RS06815 PF08281 Sigma-70, region 4 C4J88_RS06820 PF03873 Anti sigma-E protein RseA, C-terminal domain C4J88_RS06820 PF03872 Anti sigma-E protein RseA, N-terminal domain C4J88_RS06825 PF03888 MucB/RseB N-terminal domain C4J88_RS06825 PF17188 MucB/RseB C-terminal domain C4J88_RS06830 PF13180 PDZ domain C4J88_RS06835 PF01435 Peptidase family M48 C4J88_RS06840 PF01206 Sulfurtransferase TusA C4J88_RS06845 PF00578 AhpC/TSA family C4J88_RS06855 PF00701 Dihydrodipicolinate synthetase family C4J88_RS06860 PF06804 NlpB/DapX lipoprotein C4J88_RS06865 PF00753 Metallo-beta-lactamase superfamily C4J88_RS06870 PF01259 SAICAR synthetase C4J88_RS06880 PF05016 ParE toxin of type II toxin-antitoxin system, parDE C4J88_RS06885 PF04221 RelB antitoxin C4J88_RS06895 PF07690 Major Facilitator Superfamily C4J88_RS06910 PF03466 LysR substrate binding domain C4J88_RS06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS06920 PF07690 Major Facilitator Superfamily C4J88_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS06925 PF03466 LysR substrate binding domain C4J88_RS06930 PF03466 LysR substrate binding domain C4J88_RS06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS06935 PF07690 Major Facilitator Superfamily C4J88_RS06940 PF13460 NAD(P)H-binding C4J88_RS06950 PF03466 LysR substrate binding domain C4J88_RS06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS06960 PF01494 FAD binding domain C4J88_RS06965 PF07690 Major Facilitator Superfamily C4J88_RS07055 PF08765 Mor transcription activator family C4J88_RS07070 PF14718 Soluble lytic murein transglycosylase L domain C4J88_RS07070 PF01464 Transglycosylase SLT domain C4J88_RS07100 PF03237 Terminase-like family C4J88_RS07105 PF06074 Protein of unknown function (DUF935) C4J88_RS07135 PF10124 Mu-like prophage major head subunit gpT C4J88_RS07215 PF02413 Caudovirales tail fibre assembly protein, lambda gpK C4J88_RS07225 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS07235 PF00570 HRDC domain C4J88_RS07235 PF01612 3'-5' exonuclease C4J88_RS07240 PF05166 YcgL domain C4J88_RS07245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS07250 PF00881 Nitroreductase family C4J88_RS07255 PF03692 Putative zinc- or iron-chelating domain C4J88_RS07275 PF01844 HNH endonuclease C4J88_RS07295 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C4J88_RS07295 PF00326 Prolyl oligopeptidase family C4J88_RS07305 PF13230 Glutamine amidotransferases class-II C4J88_RS07320 PF03746 LamB/YcsF family C4J88_RS07325 PF02682 Carboxyltransferase domain, subdomain C and D C4J88_RS07330 PF02626 Carboxyltransferase domain, subdomain A and B C4J88_RS07340 PF10431 C-terminal, D2-small domain, of ClpB protein C4J88_RS07340 PF07724 AAA domain (Cdc48 subfamily) C4J88_RS07340 PF17871 AAA lid domain C4J88_RS07340 PF02861 Clp amino terminal domain, pathogenicity island component C4J88_RS07340 PF00004 ATPase family associated with various cellular activities (AAA) C4J88_RS07350 PF00291 Pyridoxal-phosphate dependent enzyme C4J88_RS07360 PF00330 Aconitase family (aconitate hydratase) C4J88_RS07360 PF00694 Aconitase C-terminal domain C4J88_RS07365 PF18125 RlmM ferredoxin-like domain C4J88_RS07365 PF01728 FtsJ-like methyltransferase C4J88_RS07370 PF01206 Sulfurtransferase TusA C4J88_RS07375 PF01554 MatE C4J88_RS07380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J88_RS07380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS07380 PF11890 Domain of unknown function (DUF3410) C4J88_RS07385 PF00005 ABC transporter C4J88_RS07385 PF00664 ABC transporter transmembrane region C4J88_RS07390 PF13784 Fic/DOC family N-terminal C4J88_RS07390 PF02661 Fic/DOC family C4J88_RS07395 PF01464 Transglycosylase SLT domain C4J88_RS07395 PF14718 Soluble lytic murein transglycosylase L domain C4J88_RS07400 PF00005 ABC transporter C4J88_RS07400 PF16326 ABC transporter C-terminal domain C4J88_RS07400 PF12848 ABC transporter C4J88_RS07405 PF00582 Universal stress protein family C4J88_RS07415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J88_RS07415 PF00378 Enoyl-CoA hydratase/isomerase C4J88_RS07415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J88_RS07420 PF02803 Thiolase, C-terminal domain C4J88_RS07420 PF00108 Thiolase, N-terminal domain C4J88_RS07430 PF01131 DNA topoisomerase C4J88_RS07430 PF01751 Toprim domain C4J88_RS07430 PF08272 Topoisomerase I zinc-ribbon-like C4J88_RS07430 PF01396 Topoisomerase DNA binding C4 zinc finger C4J88_RS07445 PF03846 Cell division inhibitor SulA C4J88_RS07450 PF01726 LexA DNA binding domain C4J88_RS07450 PF00717 Peptidase S24-like C4J88_RS07455 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS07460 PF00933 Glycosyl hydrolase family 3 N terminal domain C4J88_RS07465 PF00176 SNF2 family N-terminal domain C4J88_RS07465 PF00271 Helicase conserved C-terminal domain C4J88_RS07465 PF12419 SNF2 Helicase protein C4J88_RS07470 PF00176 SNF2 family N-terminal domain C4J88_RS07470 PF00271 Helicase conserved C-terminal domain C4J88_RS07470 PF12419 SNF2 Helicase protein C4J88_RS07480 PF00271 Helicase conserved C-terminal domain C4J88_RS07480 PF00270 DEAD/DEAH box helicase C4J88_RS07480 PF17757 UvrB interaction domain C4J88_RS07480 PF03461 TRCF domain C4J88_RS07480 PF02559 CarD-like/TRCF domain C4J88_RS07485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4J88_RS07485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4J88_RS07490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J88_RS07490 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS07495 PF03009 Glycerophosphoryl diester phosphodiesterase family C4J88_RS07505 PF02687 FtsX-like permease family C4J88_RS07505 PF12704 MacB-like periplasmic core domain C4J88_RS07510 PF00005 ABC transporter C4J88_RS07515 PF02687 FtsX-like permease family C4J88_RS07515 PF12704 MacB-like periplasmic core domain C4J88_RS07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS07520 PF00672 HAMP domain C4J88_RS07520 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS07525 PF00072 Response regulator receiver domain C4J88_RS07525 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS07535 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C4J88_RS07535 PF14489 QueF-like protein C4J88_RS07550 PF04333 MlaA lipoprotein C4J88_RS07565 PF02954 Bacterial regulatory protein, Fis family C4J88_RS07565 PF00072 Response regulator receiver domain C4J88_RS07565 PF00158 Sigma-54 interaction domain C4J88_RS07575 PF00923 Transaldolase/Fructose-6-phosphate aldolase C4J88_RS07580 PF01207 Dihydrouridine synthase (Dus) C4J88_RS07625 PF07690 Major Facilitator Superfamily C4J88_RS07630 PF06039 Malate:quinone oxidoreductase (Mqo) C4J88_RS07635 PF03466 LysR substrate binding domain C4J88_RS07635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS07660 PF11892 Domain of unknown function (DUF3412) C4J88_RS07660 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C4J88_RS07660 PF03641 Possible lysine decarboxylase C4J88_RS07670 PF12241 Trans-2-enoyl-CoA reductase catalytic region C4J88_RS07670 PF07055 Enoyl reductase FAD binding domain C4J88_RS07670 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C4J88_RS07685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS07685 PF03466 LysR substrate binding domain C4J88_RS07690 PF00202 Aminotransferase class-III C4J88_RS07700 PF03466 LysR substrate binding domain C4J88_RS07700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS07705 PF07690 Major Facilitator Superfamily C4J88_RS07715 PF00860 Permease family C4J88_RS07720 PF00561 alpha/beta hydrolase fold C4J88_RS07725 PF03472 Autoinducer binding domain C4J88_RS07725 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS07730 PF00561 alpha/beta hydrolase fold C4J88_RS07735 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS07740 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J88_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS07745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J88_RS07745 PF00005 ABC transporter C4J88_RS07750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J88_RS07750 PF00005 ABC transporter C4J88_RS07755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J88_RS07760 PF00106 short chain dehydrogenase C4J88_RS07765 PF13419 Haloacid dehalogenase-like hydrolase C4J88_RS07775 PF01979 Amidohydrolase family C4J88_RS07780 PF01008 Initiation factor 2 subunit family C4J88_RS07785 PF03989 DNA gyrase C-terminal domain, beta-propeller C4J88_RS07785 PF00521 DNA gyrase/topoisomerase IV, subunit A C4J88_RS07790 PF00266 Aminotransferase class-V C4J88_RS07795 PF01842 ACT domain C4J88_RS07795 PF01817 Chorismate mutase type II C4J88_RS07795 PF00800 Prephenate dehydratase C4J88_RS07800 PF00155 Aminotransferase class I and II C4J88_RS07805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4J88_RS07810 PF02224 Cytidylate kinase C4J88_RS07815 PF00575 S1 RNA binding domain C4J88_RS07825 PF00216 Bacterial DNA-binding protein C4J88_RS07840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4J88_RS07840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4J88_RS07840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4J88_RS07845 PF01370 NAD dependent epimerase/dehydratase family C4J88_RS07850 PF13537 Glutamine amidotransferase domain C4J88_RS07850 PF00733 Asparagine synthase C4J88_RS07860 PF01370 NAD dependent epimerase/dehydratase family C4J88_RS07865 PF00953 Glycosyl transferase family 4 C4J88_RS07870 PF02719 Polysaccharide biosynthesis protein C4J88_RS07890 PF05523 WxcM-like, C-terminal C4J88_RS07895 PF00583 Acetyltransferase (GNAT) family C4J88_RS07905 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C4J88_RS07910 PF01943 Polysaccharide biosynthesis protein C4J88_RS07915 PF00535 Glycosyl transferase family 2 C4J88_RS07955 PF03814 Potassium-transporting ATPase A subunit C4J88_RS07965 PF02669 K+-transporting ATPase, c chain C4J88_RS07970 PF13493 Domain of unknown function (DUF4118) C4J88_RS07970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS07970 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS07970 PF02702 Osmosensitive K+ channel His kinase sensor domain C4J88_RS07970 PF13492 GAF domain C4J88_RS07975 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS07975 PF00072 Response regulator receiver domain C4J88_RS07980 PF01734 Patatin-like phospholipase C4J88_RS08010 PF05593 RHS Repeat C4J88_RS08010 PF03527 RHS protein C4J88_RS08010 PF05593 RHS Repeat C4J88_RS08010 PF03527 RHS protein C4J88_RS08015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS08015 PF12729 Four helix bundle sensory module for signal transduction C4J88_RS08015 PF00672 HAMP domain C4J88_RS08020 PF01026 TatD related DNase C4J88_RS08025 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS08025 PF01464 Transglycosylase SLT domain C4J88_RS08050 PF00005 ABC transporter C4J88_RS08060 PF03449 Transcription elongation factor, N-terminal C4J88_RS08060 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J88_RS08070 PF00005 ABC transporter C4J88_RS08075 PF13472 GDSL-like Lipase/Acylhydrolase family C4J88_RS08085 PF17969 L,D-transpeptidase C-terminal domain C4J88_RS08085 PF03734 L,D-transpeptidase catalytic domain C4J88_RS08090 PF11839 Alanine-zipper, major outer membrane lipoprotein C4J88_RS08100 PF00793 DAHP synthetase I family C4J88_RS08115 PF08546 Ketopantoate reductase PanE/ApbA C terminal C4J88_RS08115 PF02558 Ketopantoate reductase PanE/ApbA C4J88_RS08130 PF03466 LysR substrate binding domain C4J88_RS08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS08135 PF03449 Transcription elongation factor, N-terminal C4J88_RS08135 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J88_RS08150 PF09285 Elongation factor P, C-terminal C4J88_RS08150 PF08207 Elongation factor P (EF-P) KOW-like domain C4J88_RS08150 PF01132 Elongation factor P (EF-P) OB domain C4J88_RS08155 PF07859 alpha/beta hydrolase fold C4J88_RS08160 PF02566 OsmC-like protein C4J88_RS08165 PF01047 MarR family C4J88_RS08170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS08170 PF03466 LysR substrate binding domain C4J88_RS08175 PF01925 Sulfite exporter TauE/SafE C4J88_RS08180 PF03466 LysR substrate binding domain C4J88_RS08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS08190 PF06224 Winged helix DNA-binding domain C4J88_RS08195 PF01474 Class-II DAHP synthetase family C4J88_RS08205 PF00378 Enoyl-CoA hydratase/isomerase C4J88_RS08205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J88_RS08205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J88_RS08215 PF00270 DEAD/DEAH box helicase C4J88_RS08215 PF00271 Helicase conserved C-terminal domain C4J88_RS08215 PF03880 DbpA RNA binding domain C4J88_RS08220 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C4J88_RS08225 PF05724 Thiopurine S-methyltransferase (TPMT) C4J88_RS08230 PF01435 Peptidase family M48 C4J88_RS08235 PF00155 Aminotransferase class I and II C4J88_RS08240 PF01641 SelR domain C4J88_RS08245 PF00255 Glutathione peroxidase C4J88_RS08250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J88_RS08250 PF00072 Response regulator receiver domain C4J88_RS08250 PF00672 HAMP domain C4J88_RS08250 PF01627 Hpt domain C4J88_RS08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS08250 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS08260 PF13185 GAF domain C4J88_RS08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS08265 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS08265 PF00072 Response regulator receiver domain C4J88_RS08265 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS08265 PF01627 Hpt domain C4J88_RS08265 PF00989 PAS fold C4J88_RS08270 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS08270 PF00072 Response regulator receiver domain C4J88_RS08280 PF01966 HD domain C4J88_RS08315 PF00849 RNA pseudouridylate synthase C4J88_RS08325 PF12804 MobA-like NTP transferase domain C4J88_RS08330 PF00994 Probable molybdopterin binding domain C4J88_RS08335 PF00994 Probable molybdopterin binding domain C4J88_RS08335 PF03453 MoeA N-terminal region (domain I and II) C4J88_RS08335 PF03454 MoeA C-terminal region (domain IV) C4J88_RS08350 PF05532 CsbD-like C4J88_RS08355 PF01312 FlhB HrpN YscU SpaS Family C4J88_RS08365 PF00005 ABC transporter C4J88_RS08375 PF01578 Cytochrome C assembly protein C4J88_RS08380 PF04995 Heme exporter protein D (CcmD) C4J88_RS08385 PF03100 CcmE C4J88_RS08390 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C4J88_RS08390 PF01578 Cytochrome C assembly protein C4J88_RS08395 PF08534 Redoxin C4J88_RS08400 PF03918 Cytochrome C biogenesis protein C4J88_RS08430 PF07690 Major Facilitator Superfamily C4J88_RS08440 PF00520 Ion transport protein C4J88_RS08440 PF00027 Cyclic nucleotide-binding domain C4J88_RS08450 PF00224 Pyruvate kinase, barrel domain C4J88_RS08450 PF02887 Pyruvate kinase, alpha/beta domain C4J88_RS08455 PF13660 Domain of unknown function (DUF4147) C4J88_RS08455 PF05161 MOFRL family C4J88_RS08460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4J88_RS08460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C4J88_RS08465 PF01261 Xylose isomerase-like TIM barrel C4J88_RS08470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J88_RS08470 PF00205 Thiamine pyrophosphate enzyme, central domain C4J88_RS08470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J88_RS08480 PF08362 YcdC-like protein, C-terminal region C4J88_RS08480 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS08485 PF05661 Protein of unknown function (DUF808) C4J88_RS08495 PF04333 MlaA lipoprotein C4J88_RS08515 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4J88_RS08520 PF04341 Protein of unknown function, DUF485 C4J88_RS08525 PF00474 Sodium:solute symporter family C4J88_RS08530 PF00285 Citrate synthase, C-terminal domain C4J88_RS08535 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C4J88_RS08540 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C4J88_RS08545 PF02910 Fumarate reductase flavoprotein C-term C4J88_RS08545 PF00890 FAD binding domain C4J88_RS08550 PF13085 2Fe-2S iron-sulfur cluster binding domain C4J88_RS08555 PF02779 Transketolase, pyrimidine binding domain C4J88_RS08555 PF16870 2-oxoglutarate dehydrogenase C-terminal C4J88_RS08555 PF00676 Dehydrogenase E1 component C4J88_RS08555 PF16078 2-oxoglutarate dehydrogenase N-terminus C4J88_RS08560 PF02817 e3 binding domain C4J88_RS08560 PF00364 Biotin-requiring enzyme C4J88_RS08560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4J88_RS08565 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS08565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J88_RS08570 PF00549 CoA-ligase C4J88_RS08570 PF08442 ATP-grasp domain C4J88_RS08575 PF02629 CoA binding domain C4J88_RS08575 PF00549 CoA-ligase C4J88_RS08580 PF05525 Branched-chain amino acid transport protein C4J88_RS08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS08605 PF00183 Hsp90 protein C4J88_RS08615 PF02678 Pirin C4J88_RS08615 PF05726 Pirin C-terminal cupin domain C4J88_RS08630 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J88_RS08630 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J88_RS08635 PF07977 FabA-like domain C4J88_RS08640 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS08640 PF01627 Hpt domain C4J88_RS08640 PF00672 HAMP domain C4J88_RS08640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J88_RS08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS08640 PF00072 Response regulator receiver domain C4J88_RS08650 PF00593 TonB dependent receptor C4J88_RS08650 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS08655 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C4J88_RS08655 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C4J88_RS08670 PF03061 Thioesterase superfamily C4J88_RS08680 PF12697 Alpha/beta hydrolase family C4J88_RS08690 PF01594 AI-2E family transporter C4J88_RS08695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS08695 PF00672 HAMP domain C4J88_RS08695 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS08700 PF00072 Response regulator receiver domain C4J88_RS08700 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS08705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C4J88_RS08710 PF16884 N-terminal domain of oxidoreductase C4J88_RS08710 PF00107 Zinc-binding dehydrogenase C4J88_RS08720 PF00155 Aminotransferase class I and II C4J88_RS08720 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS08725 PF16591 Helical bimodular sensor domain C4J88_RS08725 PF00672 HAMP domain C4J88_RS08725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS08730 PF12146 Serine aminopeptidase, S33 C4J88_RS08765 PF13378 Enolase C-terminal domain-like C4J88_RS08765 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J88_RS08780 PF01411 tRNA synthetases class II (A) C4J88_RS08780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J88_RS08780 PF02272 DHHA1 domain C4J88_RS08785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS08785 PF03466 LysR substrate binding domain C4J88_RS08795 PF09317 Domain of unknown function (DUF1974) C4J88_RS08795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS08795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS08795 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS08805 PF00043 Glutathione S-transferase, C-terminal domain C4J88_RS08805 PF13417 Glutathione S-transferase, N-terminal domain C4J88_RS08810 PF00005 ABC transporter C4J88_RS08815 PF01061 ABC-2 type transporter C4J88_RS08835 PF07690 Major Facilitator Superfamily C4J88_RS08840 PF00893 Small Multidrug Resistance protein C4J88_RS08845 PF01758 Sodium Bile acid symporter family C4J88_RS08850 PF04381 Putative exonuclease, RdgC C4J88_RS08880 PF00682 HMGL-like C4J88_RS08885 PF02515 CoA-transferase family III C4J88_RS08890 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS08915 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J88_RS08915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J88_RS08935 PF17153 Periplasmic sensor domain, extracellular C4J88_RS08935 PF00563 EAL domain C4J88_RS08940 PF17804 Tail specific protease N-terminal domain C4J88_RS08940 PF03572 Peptidase family S41 C4J88_RS08940 PF00595 PDZ domain C4J88_RS08940 PF11818 C-terminal domain of tail specific protease (DUF3340) C4J88_RS08950 PF00005 ABC transporter C4J88_RS08950 PF08402 TOBE domain C4J88_RS08975 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS08975 PF07702 UTRA domain C4J88_RS08985 PF00950 ABC 3 transport family C4J88_RS08990 PF00005 ABC transporter C4J88_RS09020 PF04055 Radical SAM superfamily C4J88_RS09020 PF12544 Lysine-2,3-aminomutase C4J88_RS09025 PF18603 L-amino acid ligase C-terminal domain 2 C4J88_RS09025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J88_RS09045 PF00376 MerR family regulatory protein C4J88_RS09045 PF09278 MerR, DNA binding C4J88_RS09055 PF00158 Sigma-54 interaction domain C4J88_RS09065 PF00266 Aminotransferase class-V C4J88_RS09070 PF00557 Metallopeptidase family M24 C4J88_RS09070 PF01321 Creatinase/Prolidase N-terminal domain C4J88_RS09080 PF00892 EamA-like transporter family C4J88_RS09115 PF03717 Penicillin-binding Protein dimerisation domain C4J88_RS09115 PF00905 Penicillin binding protein transpeptidase domain C4J88_RS09130 PF03104 DNA polymerase family B, exonuclease domain C4J88_RS09130 PF00136 DNA polymerase family B C4J88_RS09150 PF03023 Lipid II flippase MurJ C4J88_RS09170 PF01229 Glycosyl hydrolases family 39 C4J88_RS09185 PF02563 Polysaccharide biosynthesis/export protein C4J88_RS09185 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C4J88_RS09185 PF10531 SLBB domain C4J88_RS09190 PF00535 Glycosyl transferase family 2 C4J88_RS09195 PF00483 Nucleotidyl transferase C4J88_RS09195 PF01050 Mannose-6-phosphate isomerase C4J88_RS09200 PF02397 Bacterial sugar transferase C4J88_RS09205 PF01965 DJ-1/PfpI family C4J88_RS09210 PF01965 DJ-1/PfpI family C4J88_RS09210 PF12833 Helix-turn-helix domain C4J88_RS09220 PF00723 Glycosyl hydrolases family 15 C4J88_RS09245 PF07690 Major Facilitator Superfamily C4J88_RS09250 PF01678 Diaminopimelate epimerase C4J88_RS09270 PF01764 Lipase (class 3) C4J88_RS09275 PF07969 Amidohydrolase family C4J88_RS09280 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J88_RS09285 PF01242 6-pyruvoyl tetrahydropterin synthase C4J88_RS09305 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS09305 PF00072 Response regulator receiver domain C4J88_RS09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS09315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS09315 PF00672 HAMP domain C4J88_RS09320 PF03553 Na+/H+ antiporter family C4J88_RS09320 PF13726 Na+-H+ antiporter family C4J88_RS09325 PF00672 HAMP domain C4J88_RS09325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS09325 PF17200 Single Cache domain 2 C4J88_RS09330 PF16325 Peptidase family U32 C-terminal domain C4J88_RS09330 PF01136 Peptidase family U32 C4J88_RS09335 PF01594 AI-2E family transporter C4J88_RS09350 PF08501 Shikimate dehydrogenase substrate binding domain C4J88_RS09355 PF04337 Protein of unknown function, DUF480 C4J88_RS09365 PF00375 Sodium:dicarboxylate symporter family C4J88_RS09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS09370 PF03466 LysR substrate binding domain C4J88_RS09380 PF03471 Transporter associated domain C4J88_RS09380 PF03741 Integral membrane protein TerC family C4J88_RS09385 PF00586 AIR synthase related protein, N-terminal domain C4J88_RS09385 PF02769 AIR synthase related protein, C-terminal domain C4J88_RS09395 PF03773 Predicted permease C4J88_RS09405 PF00043 Glutathione S-transferase, C-terminal domain C4J88_RS09405 PF02798 Glutathione S-transferase, N-terminal domain C4J88_RS09410 PF02567 Phenazine biosynthesis-like protein C4J88_RS09415 PF00490 Delta-aminolevulinic acid dehydratase C4J88_RS09445 PF03527 RHS protein C4J88_RS09445 PF05593 RHS Repeat C4J88_RS09450 PF07759 Protein of unknown function (DUF1615) C4J88_RS09455 PF02803 Thiolase, C-terminal domain C4J88_RS09455 PF00108 Thiolase, N-terminal domain C4J88_RS09460 PF01144 Coenzyme A transferase C4J88_RS09465 PF01144 Coenzyme A transferase C4J88_RS09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS09470 PF03466 LysR substrate binding domain C4J88_RS09480 PF02146 Sir2 family C4J88_RS09485 PF00571 CBS domain C4J88_RS09490 PF01131 DNA topoisomerase C4J88_RS09490 PF01751 Toprim domain C4J88_RS09500 PF08946 Osmosensory transporter coiled coil C4J88_RS09500 PF00083 Sugar (and other) transporter C4J88_RS09505 PF00732 GMC oxidoreductase C4J88_RS09505 PF05199 GMC oxidoreductase C4J88_RS09515 PF00120 Glutamine synthetase, catalytic domain C4J88_RS09535 PF07690 Major Facilitator Superfamily C4J88_RS09545 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS09545 PF00072 Response regulator receiver domain C4J88_RS09555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J88_RS09555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J88_RS09560 PF00690 Cation transporter/ATPase, N-terminus C4J88_RS09560 PF00689 Cation transporting ATPase, C-terminus C4J88_RS09565 PF02308 MgtC family C4J88_RS09570 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS09570 PF00072 Response regulator receiver domain C4J88_RS09575 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS09575 PF00072 Response regulator receiver domain C4J88_RS09575 PF01627 Hpt domain C4J88_RS09575 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS09575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS09575 PF00989 PAS fold C4J88_RS09585 PF00793 DAHP synthetase I family C4J88_RS09590 PF00795 Carbon-nitrogen hydrolase C4J88_RS09605 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS09605 PF00072 Response regulator receiver domain C4J88_RS09610 PF08459 UvrC Helix-hairpin-helix N-terminal C4J88_RS09610 PF02151 UvrB/uvrC motif C4J88_RS09610 PF01541 GIY-YIG catalytic domain C4J88_RS09615 PF01066 CDP-alcohol phosphatidyltransferase C4J88_RS09625 PF13356 Arm DNA-binding domain C4J88_RS09625 PF14659 Phage integrase, N-terminal SAM-like domain C4J88_RS09625 PF00589 Phage integrase family C4J88_RS09655 PF13362 Toprim domain C4J88_RS09655 PF18818 Metallopeptidase superfamily domain C4J88_RS09655 PF08401 Domain of unknown function (DUF1738) C4J88_RS09700 PF01381 Helix-turn-helix C4J88_RS09785 PF03466 LysR substrate binding domain C4J88_RS09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS09790 PF01979 Amidohydrolase family C4J88_RS09815 PF00561 alpha/beta hydrolase fold C4J88_RS09825 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS09845 PF16363 GDP-mannose 4,6 dehydratase C4J88_RS09855 PF03275 UDP-galactopyranose mutase C4J88_RS09865 PF00005 ABC transporter C4J88_RS09865 PF00664 ABC transporter transmembrane region C4J88_RS09950 PF04002 RadC-like JAB domain C4J88_RS09970 PF01751 Toprim domain C4J88_RS09970 PF01131 DNA topoisomerase C4J88_RS10010 PF13614 AAA domain C4J88_RS10025 PF01292 Prokaryotic cytochrome b561 C4J88_RS10030 PF00171 Aldehyde dehydrogenase family C4J88_RS10035 PF00202 Aminotransferase class-III C4J88_RS10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS10045 PF00672 HAMP domain C4J88_RS10050 PF07690 Major Facilitator Superfamily C4J88_RS10060 PF00171 Aldehyde dehydrogenase family C4J88_RS10075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J88_RS10075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J88_RS10080 PF00171 Aldehyde dehydrogenase family C4J88_RS10085 PF00106 short chain dehydrogenase C4J88_RS10105 PF01494 FAD binding domain C4J88_RS10110 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4J88_RS10115 PF12833 Helix-turn-helix domain C4J88_RS10135 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS10135 PF00672 HAMP domain C4J88_RS10140 PF00072 Response regulator receiver domain C4J88_RS10140 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS10160 PF01266 FAD dependent oxidoreductase C4J88_RS10165 PF12697 Alpha/beta hydrolase family C4J88_RS10170 PF07690 Major Facilitator Superfamily C4J88_RS10190 PF00005 ABC transporter C4J88_RS10195 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS10200 PF03573 outer membrane porin, OprD family C4J88_RS10210 PF01614 Bacterial transcriptional regulator C4J88_RS10210 PF09339 IclR helix-turn-helix domain C4J88_RS10215 PF04909 Amidohydrolase C4J88_RS10220 PF07690 Major Facilitator Superfamily C4J88_RS10225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J88_RS10225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS10225 PF01842 ACT domain C4J88_RS10230 PF03737 Aldolase/RraA C4J88_RS10235 PF07690 Major Facilitator Superfamily C4J88_RS10260 PF13614 AAA domain C4J88_RS10290 PF12833 Helix-turn-helix domain C4J88_RS10295 PF00263 Bacterial type II and III secretion system protein C4J88_RS10295 PF03958 Bacterial type II/III secretion system short domain C4J88_RS10300 PF07201 HrpJ-like domain C4J88_RS10305 PF00771 FHIPEP family C4J88_RS10315 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J88_RS10315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J88_RS10315 PF18269 T3SS EscN ATPase C-terminal domain C4J88_RS10330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J88_RS10335 PF00813 FliP family C4J88_RS10340 PF01313 Bacterial export proteins, family 3 C4J88_RS10345 PF01311 Bacterial export proteins, family 1 C4J88_RS10350 PF01312 FlhB HrpN YscU SpaS Family C4J88_RS10355 PF07720 Tetratricopeptide repeat C4J88_RS10360 PF04888 Secretion system effector C (SseC) like family C4J88_RS10360 PF16535 Type III cell invasion protein SipB C4J88_RS10380 PF00550 Phosphopantetheine attachment site C4J88_RS10385 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS10390 PF01464 Transglycosylase SLT domain C4J88_RS10395 PF09480 Type III secretion system protein PrgH-EprH (PrgH) C4J88_RS10400 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF C4J88_RS10410 PF01514 Secretory protein of YscJ/FliF family C4J88_RS10430 PF00072 Response regulator receiver domain C4J88_RS10430 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS10440 PF00072 Response regulator receiver domain C4J88_RS10440 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS10445 PF01627 Hpt domain C4J88_RS10445 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS10445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS10445 PF00989 PAS fold C4J88_RS10445 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS10445 PF00072 Response regulator receiver domain C4J88_RS10450 PF00561 alpha/beta hydrolase fold C4J88_RS10465 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J88_RS10465 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J88_RS10470 PF13954 PapC N-terminal domain C4J88_RS10470 PF00577 Outer membrane usher protein C4J88_RS10470 PF13953 PapC C-terminal domain C4J88_RS10475 PF00419 Fimbrial protein C4J88_RS10490 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J88_RS10490 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J88_RS10515 PF13520 Amino acid permease C4J88_RS10525 PF01339 CheB methylesterase C4J88_RS10525 PF00072 Response regulator receiver domain C4J88_RS10530 PF03975 CheD chemotactic sensory transduction C4J88_RS10535 PF01739 CheR methyltransferase, SAM binding domain C4J88_RS10535 PF03705 CheR methyltransferase, all-alpha domain C4J88_RS10540 PF01584 CheW-like domain C4J88_RS10550 PF01627 Hpt domain C4J88_RS10550 PF01584 CheW-like domain C4J88_RS10550 PF02895 Signal transducing histidine kinase, homodimeric domain C4J88_RS10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS10550 PF09078 CheY binding C4J88_RS10560 PF00072 Response regulator receiver domain C4J88_RS10565 PF00672 HAMP domain C4J88_RS10565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS10570 PF01614 Bacterial transcriptional regulator C4J88_RS10570 PF09339 IclR helix-turn-helix domain C4J88_RS10575 PF13378 Enolase C-terminal domain-like C4J88_RS10575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J88_RS10580 PF00107 Zinc-binding dehydrogenase C4J88_RS10580 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS10585 PF07690 Major Facilitator Superfamily C4J88_RS10590 PF08125 Mannitol dehydrogenase C-terminal domain C4J88_RS10590 PF01232 Mannitol dehydrogenase Rossmann domain C4J88_RS10595 PF03786 D-mannonate dehydratase (UxuA) C4J88_RS10610 PF01494 FAD binding domain C4J88_RS10625 PF00857 Isochorismatase family C4J88_RS10630 PF07690 Major Facilitator Superfamily C4J88_RS10635 PF00144 Beta-lactamase C4J88_RS10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS10640 PF03466 LysR substrate binding domain C4J88_RS10645 PF01183 Glycosyl hydrolases family 25 C4J88_RS10650 PF02435 Levansucrase/Invertase C4J88_RS10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS10655 PF03466 LysR substrate binding domain C4J88_RS10675 PF05067 Manganese containing catalase C4J88_RS10680 PF05974 Domain of unknown function (DUF892) C4J88_RS10685 PF13426 PAS domain C4J88_RS10685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS10685 PF00072 Response regulator receiver domain C4J88_RS10690 PF01040 UbiA prenyltransferase family C4J88_RS10695 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C4J88_RS10700 PF00510 Cytochrome c oxidase subunit III C4J88_RS10705 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J88_RS10710 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4J88_RS10710 PF06481 COX Aromatic Rich Motif C4J88_RS10725 PF13823 Alcohol dehydrogenase GroES-associated C4J88_RS10725 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS10725 PF00107 Zinc-binding dehydrogenase C4J88_RS10755 PF10685 Stress-induced bacterial acidophilic repeat motif C4J88_RS10760 PF00563 EAL domain C4J88_RS10760 PF01590 GAF domain C4J88_RS10760 PF00360 Phytochrome region C4J88_RS10760 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS10780 PF04239 Protein of unknown function (DUF421) C4J88_RS10785 PF01739 CheR methyltransferase, SAM binding domain C4J88_RS10785 PF08448 PAS fold C4J88_RS10785 PF03705 CheR methyltransferase, all-alpha domain C4J88_RS10785 PF01339 CheB methylesterase C4J88_RS10820 PF00994 Probable molybdopterin binding domain C4J88_RS10820 PF02464 Competence-damaged protein C4J88_RS10820 PF18146 Damage-inducible protein CinA KH domain C4J88_RS10835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J88_RS10835 PF00034 Cytochrome c C4J88_RS10840 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J88_RS10845 PF01799 [2Fe-2S] binding domain C4J88_RS10845 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J88_RS10850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS10850 PF03466 LysR substrate binding domain C4J88_RS10855 PF07690 Major Facilitator Superfamily C4J88_RS10860 PF13378 Enolase C-terminal domain-like C4J88_RS10860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J88_RS10865 PF03466 LysR substrate binding domain C4J88_RS10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS10870 PF00171 Aldehyde dehydrogenase family C4J88_RS10875 PF03435 Saccharopine dehydrogenase NADP binding domain C4J88_RS10875 PF16653 Saccharopine dehydrogenase C-terminal domain C4J88_RS10880 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4J88_RS10885 PF00356 Bacterial regulatory proteins, lacI family C4J88_RS10895 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS10900 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS10905 PF00005 ABC transporter C4J88_RS10905 PF08402 TOBE domain C4J88_RS10910 PF00149 Calcineurin-like phosphoesterase C4J88_RS10920 PF03969 AFG1-like ATPase C4J88_RS10925 PF00583 Acetyltransferase (GNAT) family C4J88_RS10935 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS10935 PF00593 TonB dependent receptor C4J88_RS10935 PF07660 Secretin and TonB N terminus short domain C4J88_RS10940 PF00884 Sulfatase C4J88_RS10945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4J88_RS10945 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C4J88_RS10950 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C4J88_RS10950 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C4J88_RS10965 PF02954 Bacterial regulatory protein, Fis family C4J88_RS10965 PF00158 Sigma-54 interaction domain C4J88_RS10965 PF00072 Response regulator receiver domain C4J88_RS11010 PF02615 Malate/L-lactate dehydrogenase C4J88_RS11040 PF13302 Acetyltransferase (GNAT) domain C4J88_RS11050 PF00860 Permease family C4J88_RS11055 PF12729 Four helix bundle sensory module for signal transduction C4J88_RS11055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS11055 PF00672 HAMP domain C4J88_RS11060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J88_RS11060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS11065 PF07690 Major Facilitator Superfamily C4J88_RS11070 PF00294 pfkB family carbohydrate kinase C4J88_RS11080 PF00356 Bacterial regulatory proteins, lacI family C4J88_RS11115 PF00873 AcrB/AcrD/AcrF family C4J88_RS11120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J88_RS11120 PF00529 HlyD membrane-fusion protein of T1SS C4J88_RS11125 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS11125 PF00072 Response regulator receiver domain C4J88_RS11130 PF00672 HAMP domain C4J88_RS11130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS11130 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS11135 PF08241 Methyltransferase domain C4J88_RS11140 PF01925 Sulfite exporter TauE/SafE C4J88_RS11145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS11145 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS11145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS11150 PF00296 Luciferase-like monooxygenase C4J88_RS11155 PF00557 Metallopeptidase family M24 C4J88_RS11170 PF12951 Passenger-associated-transport-repeat C4J88_RS11175 PF00294 pfkB family carbohydrate kinase C4J88_RS11180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J88_RS11180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J88_RS11185 PF08125 Mannitol dehydrogenase C-terminal domain C4J88_RS11185 PF01232 Mannitol dehydrogenase Rossmann domain C4J88_RS11190 PF17912 MalK OB fold domain C4J88_RS11190 PF00005 ABC transporter C4J88_RS11195 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS11200 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS11230 PF08534 Redoxin C4J88_RS11235 PF13533 Biotin-lipoyl like C4J88_RS11240 PF00873 AcrB/AcrD/AcrF family C4J88_RS11245 PF00873 AcrB/AcrD/AcrF family C4J88_RS11255 PF02321 Outer membrane efflux protein C4J88_RS11260 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS11265 PF00005 ABC transporter C4J88_RS11270 PF13407 Periplasmic binding protein domain C4J88_RS11285 PF12833 Helix-turn-helix domain C4J88_RS11290 PF04966 Carbohydrate-selective porin, OprB family C4J88_RS11295 PF01011 PQQ enzyme repeat C4J88_RS11300 PF00296 Luciferase-like monooxygenase C4J88_RS11305 PF01613 Flavin reductase like domain C4J88_RS11310 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J88_RS11315 PF00005 ABC transporter C4J88_RS11315 PF08402 TOBE domain C4J88_RS11325 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS11330 PF13416 Bacterial extracellular solute-binding protein C4J88_RS11335 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C4J88_RS11335 PF00925 GTP cyclohydrolase II C4J88_RS11345 PF07690 Major Facilitator Superfamily C4J88_RS11350 PF09297 NADH pyrophosphatase zinc ribbon domain C4J88_RS11350 PF00293 NUDIX domain C4J88_RS11355 PF07729 FCD domain C4J88_RS11355 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS11360 PF02627 Carboxymuconolactone decarboxylase family C4J88_RS11365 PF01613 Flavin reductase like domain C4J88_RS11370 PF00171 Aldehyde dehydrogenase family C4J88_RS11375 PF12697 Alpha/beta hydrolase family C4J88_RS11385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS11385 PF00672 HAMP domain C4J88_RS11385 PF02743 Cache domain C4J88_RS11390 PF01062 Bestrophin, RFP-TM, chloride channel C4J88_RS11400 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS11400 PF17151 Periplasmic sensor domain C4J88_RS11405 PF01022 Bacterial regulatory protein, arsR family C4J88_RS11410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J88_RS11415 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS11415 PF00593 TonB dependent receptor C4J88_RS11430 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS11435 PF00920 Dehydratase family C4J88_RS11440 PF07690 Major Facilitator Superfamily C4J88_RS11450 PF00171 Aldehyde dehydrogenase family C4J88_RS11460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J88_RS11465 PF00005 ABC transporter C4J88_RS11470 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS11475 PF01263 Aldose 1-epimerase C4J88_RS11485 PF12852 Cupin C4J88_RS11485 PF12833 Helix-turn-helix domain C4J88_RS11490 PF07690 Major Facilitator Superfamily C4J88_RS11495 PF02798 Glutathione S-transferase, N-terminal domain C4J88_RS11500 PF13407 Periplasmic binding protein domain C4J88_RS11510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J88_RS11510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J88_RS11515 PF02954 Bacterial regulatory protein, Fis family C4J88_RS11515 PF13426 PAS domain C4J88_RS11515 PF00158 Sigma-54 interaction domain C4J88_RS11535 PF14759 Reductase C-terminal C4J88_RS11535 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS11545 PF02673 Bacitracin resistance protein BacA C4J88_RS11555 PF12833 Helix-turn-helix domain C4J88_RS11555 PF01965 DJ-1/PfpI family C4J88_RS11560 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS11560 PF16925 Tetracyclin repressor-like, C-terminal domain C4J88_RS11570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J88_RS11575 PF00550 Phosphopantetheine attachment site C4J88_RS11575 PF14765 Polyketide synthase dehydratase C4J88_RS11575 PF00698 Acyl transferase domain C4J88_RS11575 PF08659 KR domain C4J88_RS11575 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J88_RS11575 PF16197 Ketoacyl-synthetase C-terminal extension C4J88_RS11575 PF00107 Zinc-binding dehydrogenase C4J88_RS11575 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS11575 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J88_RS11585 PF00561 alpha/beta hydrolase fold C4J88_RS11600 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS11600 PF00107 Zinc-binding dehydrogenase C4J88_RS11610 PF00072 Response regulator receiver domain C4J88_RS11610 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS11620 PF00501 AMP-binding enzyme C4J88_RS11620 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS11625 PF00083 Sugar (and other) transporter C4J88_RS11625 PF08946 Osmosensory transporter coiled coil C4J88_RS11635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J88_RS11650 PF00999 Sodium/hydrogen exchanger family C4J88_RS11650 PF02254 TrkA-N domain C4J88_RS11665 PF01566 Natural resistance-associated macrophage protein C4J88_RS11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS11670 PF03466 LysR substrate binding domain C4J88_RS11695 PF03502 Nucleoside-specific channel-forming protein, Tsx C4J88_RS11700 PF12833 Helix-turn-helix domain C4J88_RS11725 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C4J88_RS11725 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C4J88_RS11730 PF02540 NAD synthase C4J88_RS11740 PF01266 FAD dependent oxidoreductase C4J88_RS11745 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS11745 PF04324 BFD-like [2Fe-2S] binding domain C4J88_RS11755 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS11760 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS11765 PF08402 TOBE domain C4J88_RS11765 PF00005 ABC transporter C4J88_RS11770 PF09339 IclR helix-turn-helix domain C4J88_RS11770 PF01614 Bacterial transcriptional regulator C4J88_RS11780 PF01554 MatE C4J88_RS11800 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS11800 PF00550 Phosphopantetheine attachment site C4J88_RS11800 PF07993 Male sterility protein C4J88_RS11800 PF00668 Condensation domain C4J88_RS11800 PF00501 AMP-binding enzyme C4J88_RS11815 PF00005 ABC transporter C4J88_RS11815 PF00664 ABC transporter transmembrane region C4J88_RS11855 PF01965 DJ-1/PfpI family C4J88_RS11855 PF12833 Helix-turn-helix domain C4J88_RS11865 PF02678 Pirin C4J88_RS11865 PF17954 Quercetinase C-terminal cupin domain C4J88_RS11870 PF01965 DJ-1/PfpI family C4J88_RS11875 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS11880 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS11885 PF02311 AraC-like ligand binding domain C4J88_RS11885 PF12833 Helix-turn-helix domain C4J88_RS11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS11890 PF03466 LysR substrate binding domain C4J88_RS11900 PF07969 Amidohydrolase family C4J88_RS11905 PF00857 Isochorismatase family C4J88_RS11910 PF03466 LysR substrate binding domain C4J88_RS11910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS11920 PF00563 EAL domain C4J88_RS11920 PF08447 PAS fold C4J88_RS11920 PF05231 MASE1 C4J88_RS11920 PF13426 PAS domain C4J88_RS11920 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS11920 PF08448 PAS fold C4J88_RS11930 PF02333 Phytase C4J88_RS11935 PF01618 MotA/TolQ/ExbB proton channel family C4J88_RS11940 PF02472 Biopolymer transport protein ExbD/TolR C4J88_RS11950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J88_RS11950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS11955 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS11955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS11955 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS11960 PF00296 Luciferase-like monooxygenase C4J88_RS11970 PF00581 Rhodanese-like domain C4J88_RS11975 PF05995 Cysteine dioxygenase type I C4J88_RS11980 PF03466 LysR substrate binding domain C4J88_RS11980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS11985 PF00596 Class II Aldolase and Adducin N-terminal domain C4J88_RS11990 PF00456 Transketolase, thiamine diphosphate binding domain C4J88_RS11990 PF02780 Transketolase, C-terminal domain C4J88_RS11990 PF02779 Transketolase, pyrimidine binding domain C4J88_RS12000 PF01266 FAD dependent oxidoreductase C4J88_RS12020 PF07063 Domain of unknown function (DUF1338) C4J88_RS12040 PF01343 Peptidase family S49 C4J88_RS12040 PF08496 Peptidase family S49 N-terminal C4J88_RS12045 PF02734 DAK2 domain C4J88_RS12050 PF02733 Dak1 domain C4J88_RS12055 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS12055 PF00107 Zinc-binding dehydrogenase C4J88_RS12065 PF13407 Periplasmic binding protein domain C4J88_RS12070 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS12075 PF00005 ABC transporter C4J88_RS12080 PF02502 Ribose/Galactose Isomerase C4J88_RS12085 PF04198 Putative sugar-binding domain C4J88_RS12095 PF00571 CBS domain C4J88_RS12095 PF03471 Transporter associated domain C4J88_RS12095 PF03741 Integral membrane protein TerC family C4J88_RS12110 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS12115 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS12120 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS12125 PF00005 ABC transporter C4J88_RS12145 PF00294 pfkB family carbohydrate kinase C4J88_RS12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS12155 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS12155 PF13188 PAS domain C4J88_RS12155 PF00072 Response regulator receiver domain C4J88_RS12155 PF08448 PAS fold C4J88_RS12160 PF00501 AMP-binding enzyme C4J88_RS12160 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS12165 PF00106 short chain dehydrogenase C4J88_RS12175 PF03575 Peptidase family S51 C4J88_RS12180 PF02954 Bacterial regulatory protein, Fis family C4J88_RS12180 PF00989 PAS fold C4J88_RS12180 PF00158 Sigma-54 interaction domain C4J88_RS12185 PF00005 ABC transporter C4J88_RS12185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J88_RS12190 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J88_RS12190 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS12195 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS12200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J88_RS12205 PF05698 Bacterial trigger factor protein (TF) C-terminus C4J88_RS12215 PF00248 Aldo/keto reductase family C4J88_RS12220 PF05638 Type VI secretion system effector, Hcp C4J88_RS12235 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath C4J88_RS12245 PF05947 Type VI secretion system, TssF C4J88_RS12255 PF07724 AAA domain (Cdc48 subfamily) C4J88_RS12255 PF17871 AAA lid domain C4J88_RS12255 PF10431 C-terminal, D2-small domain, of ClpB protein C4J88_RS12255 PF00004 ATPase family associated with various cellular activities (AAA) C4J88_RS12260 PF00158 Sigma-54 interaction domain C4J88_RS12260 PF02954 Bacterial regulatory protein, Fis family C4J88_RS12260 PF00072 Response regulator receiver domain C4J88_RS12280 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE C4J88_RS12290 PF14331 ImcF-related N-terminal domain C4J88_RS12290 PF06761 Intracellular multiplication and human macrophage-killing C4J88_RS12290 PF06744 Type VI secretion protein IcmF C-terminal C4J88_RS12300 PF00069 Protein kinase domain C4J88_RS12315 PF02378 Phosphotransferase system, EIIC C4J88_RS12330 PF00106 short chain dehydrogenase C4J88_RS12335 PF00743 Flavin-binding monooxygenase-like C4J88_RS12340 PF12697 Alpha/beta hydrolase family C4J88_RS12345 PF00487 Fatty acid desaturase C4J88_RS12360 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C4J88_RS12365 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS12365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS12365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS12365 PF09317 Domain of unknown function (DUF1974) C4J88_RS12380 PF02803 Thiolase, C-terminal domain C4J88_RS12380 PF00108 Thiolase, N-terminal domain C4J88_RS12385 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS12385 PF00501 AMP-binding enzyme C4J88_RS12390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J88_RS12390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J88_RS12420 PF10282 Lactonase, 7-bladed beta-propeller C4J88_RS12440 PF00149 Calcineurin-like phosphoesterase C4J88_RS12440 PF12320 Type 5 capsule protein repressor C-terminal domain C4J88_RS12475 PF01882 Protein of unknown function DUF58 C4J88_RS12480 PF07726 ATPase family associated with various cellular activities (AAA) C4J88_RS12480 PF17863 AAA lid domain C4J88_RS12490 PF05088 Bacterial NAD-glutamate dehydrogenase C4J88_RS12495 PF07729 FCD domain C4J88_RS12495 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS12500 PF07729 FCD domain C4J88_RS12500 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS12505 PF00375 Sodium:dicarboxylate symporter family C4J88_RS12510 PF00117 Glutamine amidotransferase class-I C4J88_RS12510 PF13302 Acetyltransferase (GNAT) domain C4J88_RS12510 PF13673 Acetyltransferase (GNAT) domain C4J88_RS12510 PF00958 GMP synthase C terminal domain C4J88_RS12510 PF03352 Methyladenine glycosylase C4J88_RS12535 PF02633 Creatinine amidohydrolase C4J88_RS12550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS12550 PF00672 HAMP domain C4J88_RS12550 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS12555 PF00072 Response regulator receiver domain C4J88_RS12555 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS12565 PF01418 Helix-turn-helix domain, rpiR family C4J88_RS12565 PF01380 SIS domain C4J88_RS12575 PF00294 pfkB family carbohydrate kinase C4J88_RS12580 PF01261 Xylose isomerase-like TIM barrel C4J88_RS12585 PF04962 KduI/IolB family C4J88_RS12595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J88_RS12595 PF00205 Thiamine pyrophosphate enzyme, central domain C4J88_RS12595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J88_RS12600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J88_RS12600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J88_RS12610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J88_RS12610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J88_RS12615 PF13407 Periplasmic binding protein domain C4J88_RS12620 PF00005 ABC transporter C4J88_RS12625 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS12630 PF01258 Prokaryotic dksA/traR C4-type zinc finger C4J88_RS12635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS12685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C4J88_RS12685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C4J88_RS12690 PF00445 Ribonuclease T2 family C4J88_RS12695 PF01810 LysE type translocator C4J88_RS12700 PF12833 Helix-turn-helix domain C4J88_RS12705 PF00005 ABC transporter C4J88_RS12705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J88_RS12710 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS12710 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J88_RS12715 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS12720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J88_RS12725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J88_RS12730 PF01476 LysM domain C4J88_RS12730 PF01464 Transglycosylase SLT domain C4J88_RS12735 PF16123 Hydroxyacylglutathione hydrolase C-terminus C4J88_RS12735 PF00753 Metallo-beta-lactamase superfamily C4J88_RS12745 PF00075 RNase H C4J88_RS12750 PF00929 Exonuclease C4J88_RS12755 PF00672 HAMP domain C4J88_RS12755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS12755 PF17200 Single Cache domain 2 C4J88_RS12760 PF02673 Bacitracin resistance protein BacA C4J88_RS12775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS12775 PF03466 LysR substrate binding domain C4J88_RS12780 PF02525 Flavodoxin-like fold C4J88_RS12790 PF07690 Major Facilitator Superfamily C4J88_RS12795 PF00005 ABC transporter C4J88_RS12795 PF12848 ABC transporter C4J88_RS12825 PF07690 Major Facilitator Superfamily C4J88_RS12845 PF01068 ATP dependent DNA ligase domain C4J88_RS12845 PF04679 ATP dependent DNA ligase C terminal region C4J88_RS12845 PF13298 DNA polymerase Ligase (LigD) C4J88_RS12850 PF02735 Ku70/Ku80 beta-barrel domain C4J88_RS12860 PF07995 Glucose / Sorbosone dehydrogenase C4J88_RS12875 PF13091 PLD-like domain C4J88_RS12880 PF09375 Imelysin C4J88_RS12880 PF13473 Cupredoxin-like domain C4J88_RS12885 PF04261 Dyp-type peroxidase family C4J88_RS12890 PF09375 Imelysin C4J88_RS12890 PF13473 Cupredoxin-like domain C4J88_RS12895 PF03239 Iron permease FTR1 family C4J88_RS12900 PF12833 Helix-turn-helix domain C4J88_RS12910 PF02321 Outer membrane efflux protein C4J88_RS12915 PF00873 AcrB/AcrD/AcrF family C4J88_RS12920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J88_RS12920 PF00529 HlyD membrane-fusion protein of T1SS C4J88_RS12925 PF03466 LysR substrate binding domain C4J88_RS12925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS12935 PF00158 Sigma-54 interaction domain C4J88_RS12935 PF00072 Response regulator receiver domain C4J88_RS12935 PF02954 Bacterial regulatory protein, Fis family C4J88_RS12940 PF00072 Response regulator receiver domain C4J88_RS12940 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS12940 PF09308 LuxQ, periplasmic C4J88_RS12945 PF00072 Response regulator receiver domain C4J88_RS12945 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS12950 PF17200 Single Cache domain 2 C4J88_RS12950 PF07730 Histidine kinase C4J88_RS12985 PF02321 Outer membrane efflux protein C4J88_RS12990 PF07690 Major Facilitator Superfamily C4J88_RS12995 PF13533 Biotin-lipoyl like C4J88_RS13015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS13025 PF00202 Aminotransferase class-III C4J88_RS13050 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS13055 PF00005 ABC transporter C4J88_RS13055 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J88_RS13065 PF03328 HpcH/HpaI aldolase/citrate lyase family C4J88_RS13070 PF01063 Amino-transferase class IV C4J88_RS13075 PF13458 Periplasmic binding protein C4J88_RS13080 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS13085 PF11862 Domain of unknown function (DUF3382) C4J88_RS13085 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS13090 PF00005 ABC transporter C4J88_RS13090 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J88_RS13095 PF00005 ABC transporter C4J88_RS13100 PF17831 Pyruvate dehydrogenase E1 component middle domain C4J88_RS13100 PF00456 Transketolase, thiamine diphosphate binding domain C4J88_RS13105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4J88_RS13105 PF00364 Biotin-requiring enzyme C4J88_RS13105 PF02817 e3 binding domain C4J88_RS13110 PF01037 Lrp/AsnC ligand binding domain C4J88_RS13120 PF00375 Sodium:dicarboxylate symporter family C4J88_RS13125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS13125 PF03466 LysR substrate binding domain C4J88_RS13130 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS13130 PF16925 Tetracyclin repressor-like, C-terminal domain C4J88_RS13135 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS13140 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS13140 PF16925 Tetracyclin repressor-like, C-terminal domain C4J88_RS13145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J88_RS13150 PF00106 short chain dehydrogenase C4J88_RS13155 PF01613 Flavin reductase like domain C4J88_RS13175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS13175 PF00672 HAMP domain C4J88_RS13180 PF13407 Periplasmic binding protein domain C4J88_RS13190 PF00892 EamA-like transporter family C4J88_RS13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS13200 PF03466 LysR substrate binding domain C4J88_RS13205 PF00857 Isochorismatase family C4J88_RS13215 PF00107 Zinc-binding dehydrogenase C4J88_RS13215 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS13225 PF00005 ABC transporter C4J88_RS13225 PF00664 ABC transporter transmembrane region C4J88_RS13245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS13245 PF03466 LysR substrate binding domain C4J88_RS13250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J88_RS13260 PF03466 LysR substrate binding domain C4J88_RS13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS13285 PF00561 alpha/beta hydrolase fold C4J88_RS13290 PF07859 alpha/beta hydrolase fold C4J88_RS13305 PF00005 ABC transporter C4J88_RS13305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4J88_RS13310 PF12911 N-terminal TM domain of oligopeptide transport permease C C4J88_RS13310 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS13315 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS13320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J88_RS13325 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS13325 PF00593 TonB dependent receptor C4J88_RS13330 PF00005 ABC transporter C4J88_RS13335 PF13407 Periplasmic binding protein domain C4J88_RS13340 PF08448 PAS fold C4J88_RS13340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS13340 PF13426 PAS domain C4J88_RS13340 PF00072 Response regulator receiver domain C4J88_RS13340 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS13345 PF03466 LysR substrate binding domain C4J88_RS13345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS13350 PF14765 Polyketide synthase dehydratase C4J88_RS13350 PF00550 Phosphopantetheine attachment site C4J88_RS13350 PF16197 Ketoacyl-synthetase C-terminal extension C4J88_RS13350 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J88_RS13350 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J88_RS13350 PF00107 Zinc-binding dehydrogenase C4J88_RS13350 PF00698 Acyl transferase domain C4J88_RS13350 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS13350 PF08659 KR domain C4J88_RS13365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4J88_RS13365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4J88_RS13365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4J88_RS13365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4J88_RS13370 PF17954 Quercetinase C-terminal cupin domain C4J88_RS13370 PF02678 Pirin C4J88_RS13375 PF13361 UvrD-like helicase C-terminal domain C4J88_RS13375 PF00580 UvrD/REP helicase N-terminal domain C4J88_RS13385 PF08548 Peptidase M10 serralysin C terminal C4J88_RS13385 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) C4J88_RS13385 PF00413 Matrixin C4J88_RS13390 PF02974 Protease inhibitor Inh C4J88_RS13395 PF00664 ABC transporter transmembrane region C4J88_RS13395 PF00005 ABC transporter C4J88_RS13400 PF00529 HlyD membrane-fusion protein of T1SS C4J88_RS13405 PF02321 Outer membrane efflux protein C4J88_RS13410 PF03797 Autotransporter beta-domain C4J88_RS13410 PF00082 Subtilase family C4J88_RS13410 PF12951 Passenger-associated-transport-repeat C4J88_RS13415 PF03797 Autotransporter beta-domain C4J88_RS13415 PF12951 Passenger-associated-transport-repeat C4J88_RS13415 PF00082 Subtilase family C4J88_RS13420 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) C4J88_RS13430 PF18081 Fanconi anemia-associated nuclease SAP domain C4J88_RS13430 PF08774 VRR-NUC domain C4J88_RS13435 PF00270 DEAD/DEAH box helicase C4J88_RS13435 PF00271 Helicase conserved C-terminal domain C4J88_RS13440 PF04168 A predicted alpha-helical domain with a conserved ER motif. C4J88_RS13440 PF14403 Circularly permuted ATP-grasp type 2 C4J88_RS13445 PF14403 Circularly permuted ATP-grasp type 2 C4J88_RS13465 PF00999 Sodium/hydrogen exchanger family C4J88_RS13470 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS13470 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS13470 PF00563 EAL domain C4J88_RS13475 PF00072 Response regulator receiver domain C4J88_RS13480 PF00989 PAS fold C4J88_RS13480 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS13480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS13490 PF00005 ABC transporter C4J88_RS13495 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS13500 PF13407 Periplasmic binding protein domain C4J88_RS13505 PF00356 Bacterial regulatory proteins, lacI family C4J88_RS13510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J88_RS13510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J88_RS13515 PF01037 Lrp/AsnC ligand binding domain C4J88_RS13525 PF12392 Collagenase C4J88_RS13525 PF01136 Peptidase family U32 C4J88_RS13530 PF01042 Endoribonuclease L-PSP C4J88_RS13545 PF00296 Luciferase-like monooxygenase C4J88_RS13565 PF02223 Thymidylate kinase C4J88_RS13570 PF00578 AhpC/TSA family C4J88_RS13570 PF02683 Cytochrome C biogenesis protein transmembrane region C4J88_RS13570 PF17991 Thioredoxin like C-terminal domain C4J88_RS13575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS13575 PF00672 HAMP domain C4J88_RS13575 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS13580 PF00072 Response regulator receiver domain C4J88_RS13580 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS13585 PF06441 Epoxide hydrolase N terminus C4J88_RS13590 PF00561 alpha/beta hydrolase fold C4J88_RS13610 PF00067 Cytochrome P450 C4J88_RS13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS13615 PF03466 LysR substrate binding domain C4J88_RS13625 PF01361 Tautomerase enzyme C4J88_RS13630 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C4J88_RS13630 PF01243 Pyridoxamine 5'-phosphate oxidase C4J88_RS13635 PF02567 Phenazine biosynthesis-like protein C4J88_RS13640 PF00425 chorismate binding enzyme C4J88_RS13640 PF00117 Glutamine amidotransferase class-I C4J88_RS13645 PF00857 Isochorismatase family C4J88_RS13650 PF01474 Class-II DAHP synthetase family C4J88_RS13655 PF03284 Phenazine biosynthesis protein A/B C4J88_RS13660 PF03284 Phenazine biosynthesis protein A/B C4J88_RS13665 PF03472 Autoinducer binding domain C4J88_RS13665 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS13670 PF00765 Autoinducer synthase C4J88_RS13675 PF13426 PAS domain C4J88_RS13675 PF08447 PAS fold C4J88_RS13675 PF07536 HWE histidine kinase C4J88_RS13685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS13685 PF13426 PAS domain C4J88_RS13685 PF08447 PAS fold C4J88_RS13705 PF01791 DeoC/LacD family aldolase C4J88_RS13710 PF00455 DeoR C terminal sensor domain C4J88_RS13710 PF08220 DeoR-like helix-turn-helix domain C4J88_RS13720 PF07690 Major Facilitator Superfamily C4J88_RS13725 PF00294 pfkB family carbohydrate kinase C4J88_RS13730 PF00672 HAMP domain C4J88_RS13730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS13735 PF07690 Major Facilitator Superfamily C4J88_RS13740 PF02899 Phage integrase, N-terminal SAM-like domain C4J88_RS13740 PF00589 Phage integrase family C4J88_RS13750 PF00535 Glycosyl transferase family 2 C4J88_RS13755 PF00551 Formyl transferase C4J88_RS13755 PF01370 NAD dependent epimerase/dehydratase family C4J88_RS13755 PF02911 Formyl transferase, C-terminal domain C4J88_RS13760 PF01522 Polysaccharide deacetylase C4J88_RS13765 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C4J88_RS13770 PF00892 EamA-like transporter family C4J88_RS13775 PF00893 Small Multidrug Resistance protein C4J88_RS13780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4J88_RS13780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4J88_RS13780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4J88_RS13800 PF00378 Enoyl-CoA hydratase/isomerase C4J88_RS13805 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS13805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS13805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS13810 PF00378 Enoyl-CoA hydratase/isomerase C4J88_RS13815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS13815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS13815 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS13820 PF00108 Thiolase, N-terminal domain C4J88_RS13820 PF02803 Thiolase, C-terminal domain C4J88_RS13825 PF00106 short chain dehydrogenase C4J88_RS13830 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS13830 PF00501 AMP-binding enzyme C4J88_RS13840 PF06745 KaiC C4J88_RS13845 PF08448 PAS fold C4J88_RS13845 PF13188 PAS domain C4J88_RS13845 PF00072 Response regulator receiver domain C4J88_RS13845 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS13845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS13855 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS13855 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J88_RS13855 PF00072 Response regulator receiver domain C4J88_RS13855 PF01627 Hpt domain C4J88_RS13855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS13855 PF00672 HAMP domain C4J88_RS13860 PF01339 CheB methylesterase C4J88_RS13865 PF01739 CheR methyltransferase, SAM binding domain C4J88_RS13865 PF03705 CheR methyltransferase, all-alpha domain C4J88_RS13870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS13870 PF00072 Response regulator receiver domain C4J88_RS13870 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS13870 PF01627 Hpt domain C4J88_RS13875 PF00072 Response regulator receiver domain C4J88_RS13875 PF13188 PAS domain C4J88_RS13875 PF08448 PAS fold C4J88_RS13875 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS13875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS13885 PF11769 Protein of unknown function (DUF3313) C4J88_RS13895 PF00293 NUDIX domain C4J88_RS13900 PF05175 Methyltransferase small domain C4J88_RS13905 PF00067 Cytochrome P450 C4J88_RS13910 PF01177 Asp/Glu/Hydantoin racemase C4J88_RS13915 PF00583 Acetyltransferase (GNAT) family C4J88_RS13920 PF02595 Glycerate kinase family C4J88_RS13925 PF17853 GGDEF-like domain C4J88_RS13925 PF05651 Putative sugar diacid recognition C4J88_RS13925 PF13556 PucR C-terminal helix-turn-helix domain C4J88_RS13930 PF07690 Major Facilitator Superfamily C4J88_RS13940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS13940 PF03466 LysR substrate binding domain C4J88_RS13945 PF00248 Aldo/keto reductase family C4J88_RS13950 PF00892 EamA-like transporter family C4J88_RS13955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J88_RS13960 PF00563 EAL domain C4J88_RS13960 PF12792 CSS motif domain associated with EAL C4J88_RS13975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J88_RS13980 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS13980 PF13192 Thioredoxin domain C4J88_RS13985 PF00578 AhpC/TSA family C4J88_RS13985 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4J88_RS14000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J88_RS14000 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS14005 PF00483 Nucleotidyl transferase C4J88_RS14025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J88_RS14030 PF00034 Cytochrome c C4J88_RS14045 PF13532 2OG-Fe(II) oxygenase superfamily C4J88_RS14050 PF03060 Nitronate monooxygenase C4J88_RS14060 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS14065 PF03459 TOBE domain C4J88_RS14065 PF00005 ABC transporter C4J88_RS14075 PF12848 ABC transporter C4J88_RS14075 PF00005 ABC transporter C4J88_RS14080 PF06912 Protein of unknown function (DUF1275) C4J88_RS14095 PF03591 AzlC protein C4J88_RS14115 PF02040 Arsenical pump membrane protein C4J88_RS14120 PF01810 LysE type translocator C4J88_RS14165 PF00011 Hsp20/alpha crystallin family C4J88_RS14185 PF13520 Amino acid permease C4J88_RS14190 PF05544 Proline racemase C4J88_RS14195 PF00701 Dihydrodipicolinate synthetase family C4J88_RS14200 PF00171 Aldehyde dehydrogenase family C4J88_RS14205 PF01266 FAD dependent oxidoreductase C4J88_RS14210 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS14215 PF01968 Hydantoinase/oxoprolinase C4J88_RS14215 PF05378 Hydantoinase/oxoprolinase N-terminal region C4J88_RS14230 PF01177 Asp/Glu/Hydantoin racemase C4J88_RS14235 PF07690 Major Facilitator Superfamily C4J88_RS14245 PF01965 DJ-1/PfpI family C4J88_RS14245 PF12833 Helix-turn-helix domain C4J88_RS14255 PF01810 LysE type translocator C4J88_RS14280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J88_RS14280 PF00529 HlyD membrane-fusion protein of T1SS C4J88_RS14285 PF07690 Major Facilitator Superfamily C4J88_RS14295 PF00248 Aldo/keto reductase family C4J88_RS14300 PF03466 LysR substrate binding domain C4J88_RS14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS14330 PF13018 Extended Signal Peptide of Type V secretion system C4J88_RS14330 PF04829 Pre-toxin domain with VENN motif C4J88_RS14330 PF05860 haemagglutination activity domain C4J88_RS14330 PF13332 Hemagglutinin repeat C4J88_RS14335 PF02794 RTX toxin acyltransferase family C4J88_RS14345 PF00589 Phage integrase family C4J88_RS14345 PF02899 Phage integrase, N-terminal SAM-like domain C4J88_RS14350 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4J88_RS14355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS14355 PF03466 LysR substrate binding domain C4J88_RS14365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS14365 PF03466 LysR substrate binding domain C4J88_RS14385 PF07486 Cell Wall Hydrolase C4J88_RS14385 PF01471 Putative peptidoglycan binding domain C4J88_RS14640 PF00772 DnaB-like helicase N terminal domain C4J88_RS14640 PF03796 DnaB-like helicase C terminal domain C4J88_RS14670 PF01381 Helix-turn-helix C4J88_RS14670 PF00717 Peptidase S24-like C4J88_RS14815 PF00589 Phage integrase family C4J88_RS14825 PF01804 Penicillin amidase C4J88_RS14840 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS14850 PF00005 ABC transporter C4J88_RS14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS14870 PF03466 LysR substrate binding domain C4J88_RS14875 PF00248 Aldo/keto reductase family C4J88_RS14880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS14880 PF12729 Four helix bundle sensory module for signal transduction C4J88_RS14880 PF00672 HAMP domain C4J88_RS14890 PF00561 alpha/beta hydrolase fold C4J88_RS14895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS14895 PF01842 ACT domain C4J88_RS14895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J88_RS14905 PF08323 Starch synthase catalytic domain C4J88_RS14905 PF00534 Glycosyl transferases group 1 C4J88_RS14910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4J88_RS14910 PF00128 Alpha amylase, catalytic domain C4J88_RS14910 PF11941 Domain of unknown function (DUF3459) C4J88_RS14915 PF02446 4-alpha-glucanotransferase C4J88_RS14920 PF00128 Alpha amylase, catalytic domain C4J88_RS14930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4J88_RS14930 PF00128 Alpha amylase, catalytic domain C4J88_RS14955 PF00593 TonB dependent receptor C4J88_RS14955 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS14960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS14960 PF00672 HAMP domain C4J88_RS14960 PF17200 Single Cache domain 2 C4J88_RS14970 PF00989 PAS fold C4J88_RS14970 PF00672 HAMP domain C4J88_RS14970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS14970 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS14970 PF18698 Histidine kinase sensor domain C4J88_RS15045 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS15065 PF07690 Major Facilitator Superfamily C4J88_RS15075 PF00291 Pyridoxal-phosphate dependent enzyme C4J88_RS15075 PF00571 CBS domain C4J88_RS15080 PF01053 Cys/Met metabolism PLP-dependent enzyme C4J88_RS15090 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C4J88_RS15090 PF18381 YcaO cyclodehydratase C-terminal domain C4J88_RS15095 PF13087 AAA domain C4J88_RS15095 PF13091 PLD-like domain C4J88_RS15100 PF00857 Isochorismatase family C4J88_RS15125 PF07995 Glucose / Sorbosone dehydrogenase C4J88_RS15130 PF07690 Major Facilitator Superfamily C4J88_RS15135 PF13673 Acetyltransferase (GNAT) domain C4J88_RS15135 PF00117 Glutamine amidotransferase class-I C4J88_RS15135 PF00958 GMP synthase C terminal domain C4J88_RS15135 PF03352 Methyladenine glycosylase C4J88_RS15135 PF13302 Acetyltransferase (GNAT) domain C4J88_RS15140 PF08946 Osmosensory transporter coiled coil C4J88_RS15140 PF00083 Sugar (and other) transporter C4J88_RS15150 PF12833 Helix-turn-helix domain C4J88_RS15150 PF06719 AraC-type transcriptional regulator N-terminus C4J88_RS15155 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C4J88_RS15160 PF07690 Major Facilitator Superfamily C4J88_RS15165 PF12833 Helix-turn-helix domain C4J88_RS15165 PF02311 AraC-like ligand binding domain C4J88_RS15170 PF07690 Major Facilitator Superfamily C4J88_RS15180 PF01425 Amidase C4J88_RS15190 PF00155 Aminotransferase class I and II C4J88_RS15190 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS15195 PF00892 EamA-like transporter family C4J88_RS15200 PF01738 Dienelactone hydrolase family C4J88_RS15210 PF00144 Beta-lactamase C4J88_RS15215 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS15215 PF00672 HAMP domain C4J88_RS15215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS15220 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS15220 PF00072 Response regulator receiver domain C4J88_RS15230 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C4J88_RS15235 PF00582 Universal stress protein family C4J88_RS15245 PF00330 Aconitase family (aconitate hydratase) C4J88_RS15245 PF06434 Aconitate hydratase 2 N-terminus C4J88_RS15245 PF11791 Aconitate B N-terminal domain C4J88_RS15255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS15255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J88_RS15270 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS15270 PF00155 Aminotransferase class I and II C4J88_RS15280 PF11940 Domain of unknown function (DUF3458) Ig-like fold C4J88_RS15280 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C4J88_RS15280 PF01433 Peptidase family M1 domain C4J88_RS15290 PF07023 Protein of unknown function (DUF1315) C4J88_RS15295 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C4J88_RS15295 PF01694 Rhomboid family C4J88_RS15300 PF00149 Calcineurin-like phosphoesterase C4J88_RS15305 PF01513 ATP-NAD kinase C4J88_RS15320 PF13519 von Willebrand factor type A domain C4J88_RS15320 PF07728 AAA domain (dynein-related subfamily) C4J88_RS15320 PF17863 AAA lid domain C4J88_RS15325 PF02514 CobN/Magnesium Chelatase C4J88_RS15330 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J88_RS15330 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J88_RS15335 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) C4J88_RS15335 PF08548 Peptidase M10 serralysin C terminal C4J88_RS15350 PF01890 Cobalamin synthesis G C-terminus C4J88_RS15355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J88_RS15360 PF01106 NifU-like domain C4J88_RS15360 PF01521 Iron-sulphur cluster biosynthesis C4J88_RS15365 PF02574 Homocysteine S-methyltransferase C4J88_RS15365 PF00809 Pterin binding enzyme C4J88_RS15365 PF02965 Vitamin B12 dependent methionine synthase, activation domain C4J88_RS15365 PF02607 B12 binding domain C4J88_RS15365 PF02310 B12 binding domain C4J88_RS15375 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4J88_RS15375 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4J88_RS15385 PF00205 Thiamine pyrophosphate enzyme, central domain C4J88_RS15385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J88_RS15385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J88_RS15390 PF03358 NADPH-dependent FMN reductase C4J88_RS15410 PF00583 Acetyltransferase (GNAT) family C4J88_RS15415 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C4J88_RS15415 PF01276 Orn/Lys/Arg decarboxylase, major domain C4J88_RS15415 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C4J88_RS15430 PF03372 Endonuclease/Exonuclease/phosphatase family C4J88_RS15440 PF00155 Aminotransferase class I and II C4J88_RS15450 PF03459 TOBE domain C4J88_RS15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS15460 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS15465 PF00005 ABC transporter C4J88_RS15470 PF00268 Ribonucleotide reductase, small chain C4J88_RS15485 PF01066 CDP-alcohol phosphatidyltransferase C4J88_RS15490 PF01925 Sulfite exporter TauE/SafE C4J88_RS15495 PF09297 NADH pyrophosphatase zinc ribbon domain C4J88_RS15495 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C4J88_RS15495 PF00293 NUDIX domain C4J88_RS15500 PF00378 Enoyl-CoA hydratase/isomerase C4J88_RS15505 PF03695 Uncharacterised protein family (UPF0149) C4J88_RS15505 PF02810 SEC-C motif C4J88_RS15510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4J88_RS15520 PF02525 Flavodoxin-like fold C4J88_RS15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS15540 PF13426 PAS domain C4J88_RS15540 PF00072 Response regulator receiver domain C4J88_RS15545 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS15545 PF17151 Periplasmic sensor domain C4J88_RS15550 PF00128 Alpha amylase, catalytic domain C4J88_RS15550 PF02806 Alpha amylase, C-terminal all-beta domain C4J88_RS15550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4J88_RS15555 PF16657 Maltogenic Amylase, C-terminal domain C4J88_RS15555 PF00128 Alpha amylase, catalytic domain C4J88_RS15560 PF11896 Domain of unknown function (DUF3416) C4J88_RS15560 PF00128 Alpha amylase, catalytic domain C4J88_RS15565 PF02308 MgtC family C4J88_RS15575 PF00155 Aminotransferase class I and II C4J88_RS15575 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS15585 PF04960 Glutaminase C4J88_RS15590 PF00296 Luciferase-like monooxygenase C4J88_RS15595 PF17755 UvrA DNA-binding domain C4J88_RS15600 PF00072 Response regulator receiver domain C4J88_RS15600 PF13426 PAS domain C4J88_RS15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS15605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C4J88_RS15605 PF14579 Helix-hairpin-helix motif C4J88_RS15605 PF07733 Bacterial DNA polymerase III alpha NTPase domain C4J88_RS15605 PF01336 OB-fold nucleic acid binding domain C4J88_RS15605 PF02811 PHP domain C4J88_RS15615 PF03846 Cell division inhibitor SulA C4J88_RS15620 PF01726 LexA DNA binding domain C4J88_RS15620 PF00717 Peptidase S24-like C4J88_RS15625 PF00293 NUDIX domain C4J88_RS15630 PF12146 Serine aminopeptidase, S33 C4J88_RS15635 PF01070 FMN-dependent dehydrogenase C4J88_RS15660 PF01965 DJ-1/PfpI family C4J88_RS15675 PF02630 SCO1/SenC C4J88_RS15700 PF01042 Endoribonuclease L-PSP C4J88_RS15710 PF01546 Peptidase family M20/M25/M40 C4J88_RS15710 PF07687 Peptidase dimerisation domain C4J88_RS15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS15715 PF03466 LysR substrate binding domain C4J88_RS15720 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J88_RS15725 PF04536 TPM domain C4J88_RS15735 PF01678 Diaminopimelate epimerase C4J88_RS15750 PF00106 short chain dehydrogenase C4J88_RS15755 PF00248 Aldo/keto reductase family C4J88_RS15760 PF03466 LysR substrate binding domain C4J88_RS15760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS15770 PF02627 Carboxymuconolactone decarboxylase family C4J88_RS15780 PF05726 Pirin C-terminal cupin domain C4J88_RS15780 PF02678 Pirin C4J88_RS15785 PF07690 Major Facilitator Superfamily C4J88_RS15790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J88_RS15795 PF00873 AcrB/AcrD/AcrF family C4J88_RS15800 PF05593 RHS Repeat C4J88_RS15800 PF03527 RHS protein C4J88_RS15825 PF01546 Peptidase family M20/M25/M40 C4J88_RS15825 PF07687 Peptidase dimerisation domain C4J88_RS15830 PF05230 MASE2 domain C4J88_RS15830 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS15835 PF01810 LysE type translocator C4J88_RS15840 PF07840 FadR C-terminal domain C4J88_RS15840 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS15845 PF01037 Lrp/AsnC ligand binding domain C4J88_RS15850 PF01053 Cys/Met metabolism PLP-dependent enzyme C4J88_RS15855 PF00230 Major intrinsic protein C4J88_RS15860 PF07690 Major Facilitator Superfamily C4J88_RS15875 PF13188 PAS domain C4J88_RS15875 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS15875 PF00563 EAL domain C4J88_RS15875 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS15880 PF00419 Fimbrial protein C4J88_RS15885 PF00577 Outer membrane usher protein C4J88_RS15885 PF13954 PapC N-terminal domain C4J88_RS15885 PF13953 PapC C-terminal domain C4J88_RS15890 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J88_RS15890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J88_RS15895 PF16970 Type-1 fimbrial protein, A C4J88_RS15900 PF01627 Hpt domain C4J88_RS15900 PF00072 Response regulator receiver domain C4J88_RS15900 PF00989 PAS fold C4J88_RS15900 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS15900 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS15905 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS15905 PF00072 Response regulator receiver domain C4J88_RS15910 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS15910 PF00563 EAL domain C4J88_RS15910 PF01590 GAF domain C4J88_RS15910 PF00360 Phytochrome region C4J88_RS15915 PF13593 SBF-like CPA transporter family (DUF4137) C4J88_RS15920 PF12833 Helix-turn-helix domain C4J88_RS15920 PF02311 AraC-like ligand binding domain C4J88_RS15930 PF00107 Zinc-binding dehydrogenase C4J88_RS15930 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS15930 PF13823 Alcohol dehydrogenase GroES-associated C4J88_RS15935 PF04107 Glutamate-cysteine ligase family 2(GCS2) C4J88_RS15970 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS15975 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS15980 PF08402 TOBE domain C4J88_RS15980 PF00005 ABC transporter C4J88_RS15985 PF00005 ABC transporter C4J88_RS15985 PF17912 MalK OB fold domain C4J88_RS15990 PF00158 Sigma-54 interaction domain C4J88_RS15990 PF02954 Bacterial regulatory protein, Fis family C4J88_RS15990 PF01590 GAF domain C4J88_RS16020 PF16861 Carbamoyltransferase C-terminus C4J88_RS16020 PF02543 Carbamoyltransferase N-terminus C4J88_RS16035 PF02698 DUF218 domain C4J88_RS16075 PF01027 Inhibitor of apoptosis-promoting Bax1 C4J88_RS16080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C4J88_RS16080 PF01565 FAD binding domain C4J88_RS16085 PF01451 Low molecular weight phosphotyrosine protein phosphatase C4J88_RS16090 PF02348 Cytidylyltransferase C4J88_RS16095 PF03966 Trm112p-like protein C4J88_RS16100 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C4J88_RS16105 PF02472 Biopolymer transport protein ExbD/TolR C4J88_RS16110 PF01618 MotA/TolQ/ExbB proton channel family C4J88_RS16115 PF00753 Metallo-beta-lactamase superfamily C4J88_RS16115 PF03772 Competence protein C4J88_RS16125 PF16750 Sensor domain of 2-component histidine kinase C4J88_RS16125 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS16125 PF00672 HAMP domain C4J88_RS16130 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS16130 PF00072 Response regulator receiver domain C4J88_RS16135 PF00672 HAMP domain C4J88_RS16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS16135 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS16135 PF01627 Hpt domain C4J88_RS16135 PF00072 Response regulator receiver domain C4J88_RS16135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4J88_RS16140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS16140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J88_RS16155 PF00085 Thioredoxin C4J88_RS16160 PF03960 ArsC family C4J88_RS16165 PF03358 NADPH-dependent FMN reductase C4J88_RS16175 PF03352 Methyladenine glycosylase C4J88_RS16180 PF01171 PP-loop family C4J88_RS16185 PF04893 Yip1 domain C4J88_RS16190 PF10263 SprT-like family C4J88_RS16190 PF17283 SprT-like zinc ribbon domain C4J88_RS16200 PF02515 CoA-transferase family III C4J88_RS16205 PF02635 DsrE/DsrF-like family C4J88_RS16210 PF02635 DsrE/DsrF-like family C4J88_RS16220 PF04358 DsrC like protein C4J88_RS16225 PF00591 Glycosyl transferase family, a/b domain C4J88_RS16225 PF02885 Glycosyl transferase family, helical bundle domain C4J88_RS16230 PF13409 Glutathione S-transferase, N-terminal domain C4J88_RS16235 PF14824 Sirohaem biosynthesis protein central C4J88_RS16235 PF10414 Sirohaem synthase dimerisation region C4J88_RS16235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J88_RS16240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4J88_RS16240 PF02403 Seryl-tRNA synthetase N-terminal domain C4J88_RS16245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C4J88_RS16250 PF12002 MgsA AAA+ ATPase C terminal C4J88_RS16250 PF00004 ATPase family associated with various cellular activities (AAA) C4J88_RS16250 PF16193 AAA C-terminal domain C4J88_RS16255 PF03548 Outer membrane lipoprotein carrier protein LolA C4J88_RS16260 PF17854 FtsK alpha domain C4J88_RS16260 PF01580 FtsK/SpoIIIE family C4J88_RS16260 PF09397 Ftsk gamma domain C4J88_RS16260 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C4J88_RS16265 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C4J88_RS16270 PF04376 Arginine-tRNA-protein transferase, N terminus C4J88_RS16270 PF04377 Arginine-tRNA-protein transferase, C terminus C4J88_RS16275 PF01176 Translation initiation factor 1A / IF-1 C4J88_RS16280 PF10431 C-terminal, D2-small domain, of ClpB protein C4J88_RS16280 PF17871 AAA lid domain C4J88_RS16280 PF07724 AAA domain (Cdc48 subfamily) C4J88_RS16280 PF02861 Clp amino terminal domain, pathogenicity island component C4J88_RS16280 PF00004 ATPase family associated with various cellular activities (AAA) C4J88_RS16285 PF02617 ATP-dependent Clp protease adaptor protein ClpS C4J88_RS16290 PF00313 'Cold-shock' DNA-binding domain C4J88_RS16295 PF00180 Isocitrate/isopropylmalate dehydrogenase C4J88_RS16300 PF03971 Monomeric isocitrate dehydrogenase C4J88_RS16305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS16305 PF03466 LysR substrate binding domain C4J88_RS16315 PF00293 NUDIX domain C4J88_RS16325 PF04356 Protein of unknown function (DUF489) C4J88_RS16330 PF00206 Lyase C4J88_RS16330 PF08328 Adenylosuccinate lyase C-terminal C4J88_RS16335 PF08007 Cupin superfamily protein C4J88_RS16340 PF13673 Acetyltransferase (GNAT) domain C4J88_RS16350 PF00463 Isocitrate lyase family C4J88_RS16355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C4J88_RS16360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C4J88_RS16365 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C4J88_RS16365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C4J88_RS16375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C4J88_RS16375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C4J88_RS16380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4J88_RS16380 PF00384 Molybdopterin oxidoreductase C4J88_RS16380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C4J88_RS16385 PF00146 NADH dehydrogenase C4J88_RS16390 PF12838 4Fe-4S dicluster domain C4J88_RS16395 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C4J88_RS16400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C4J88_RS16405 PF00361 Proton-conducting membrane transporter C4J88_RS16405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4J88_RS16410 PF00361 Proton-conducting membrane transporter C4J88_RS16415 PF00361 Proton-conducting membrane transporter C4J88_RS16445 PF07690 Major Facilitator Superfamily C4J88_RS16460 PF00171 Aldehyde dehydrogenase family C4J88_RS16475 PF00005 ABC transporter C4J88_RS16475 PF02687 FtsX-like permease family C4J88_RS16475 PF12704 MacB-like periplasmic core domain C4J88_RS16480 PF00005 ABC transporter C4J88_RS16480 PF02687 FtsX-like permease family C4J88_RS16480 PF12704 MacB-like periplasmic core domain C4J88_RS16490 PF13533 Biotin-lipoyl like C4J88_RS16500 PF00005 ABC transporter C4J88_RS16520 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J88_RS16520 PF00005 ABC transporter C4J88_RS16530 PF00296 Luciferase-like monooxygenase C4J88_RS16540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS16540 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS16540 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS16560 PF13244 Domain of unknown function (DUF4040) C4J88_RS16560 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C4J88_RS16560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4J88_RS16560 PF00361 Proton-conducting membrane transporter C4J88_RS16565 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C4J88_RS16570 PF00361 Proton-conducting membrane transporter C4J88_RS16580 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C4J88_RS16585 PF03334 Na+/H+ antiporter subunit C4J88_RS16590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS16600 PF01638 HxlR-like helix-turn-helix C4J88_RS16610 PF09190 DALR domain C4J88_RS16610 PF01406 tRNA synthetases class I (C) catalytic domain C4J88_RS16615 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C4J88_RS16615 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4J88_RS16620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C4J88_RS16625 PF00149 Calcineurin-like phosphoesterase C4J88_RS16630 PF07690 Major Facilitator Superfamily C4J88_RS16635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J88_RS16635 PF00529 HlyD membrane-fusion protein of T1SS C4J88_RS16640 PF02321 Outer membrane efflux protein C4J88_RS16645 PF01047 MarR family C4J88_RS16650 PF04357 TamB, inner membrane protein subunit of TAM complex C4J88_RS16655 PF01103 Surface antigen C4J88_RS16655 PF17243 POTRA domain TamA domain 1 C4J88_RS16655 PF07244 Surface antigen variable number repeat C4J88_RS16665 PF03372 Endonuclease/Exonuclease/phosphatase family C4J88_RS16670 PF12849 PBP superfamily domain C4J88_RS16680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS16680 PF03466 LysR substrate binding domain C4J88_RS16685 PF13411 MerR HTH family regulatory protein C4J88_RS16690 PF00682 HMGL-like C4J88_RS16700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS16700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS16700 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS16705 PF01039 Carboxyl transferase domain C4J88_RS16715 PF02785 Biotin carboxylase C-terminal domain C4J88_RS16715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J88_RS16715 PF00289 Biotin carboxylase, N-terminal domain C4J88_RS16715 PF00364 Biotin-requiring enzyme C4J88_RS16730 PF18027 Cytosolic carboxypeptidase N-terminal domain C4J88_RS16730 PF00246 Zinc carboxypeptidase C4J88_RS16735 PF01292 Prokaryotic cytochrome b561 C4J88_RS16745 PF08281 Sigma-70, region 4 C4J88_RS16745 PF04542 Sigma-70 region 2 C4J88_RS16755 PF03969 AFG1-like ATPase C4J88_RS16765 PF01709 Transcriptional regulator C4J88_RS16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS16770 PF03466 LysR substrate binding domain C4J88_RS16775 PF00266 Aminotransferase class-V C4J88_RS16785 PF01292 Prokaryotic cytochrome b561 C4J88_RS16795 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J88_RS16795 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS16800 PF00795 Carbon-nitrogen hydrolase C4J88_RS16805 PF12833 Helix-turn-helix domain C4J88_RS16805 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J88_RS16815 PF01047 MarR family C4J88_RS16820 PF17831 Pyruvate dehydrogenase E1 component middle domain C4J88_RS16820 PF00456 Transketolase, thiamine diphosphate binding domain C4J88_RS16830 PF06965 Na+/H+ antiporter 1 C4J88_RS16835 PF05698 Bacterial trigger factor protein (TF) C-terminus C4J88_RS16840 PF00216 Bacterial DNA-binding protein C4J88_RS16845 PF05362 Lon protease (S16) C-terminal proteolytic domain C4J88_RS16845 PF02190 ATP-dependent protease La (LON) substrate-binding domain C4J88_RS16845 PF00004 ATPase family associated with various cellular activities (AAA) C4J88_RS16850 PF06689 ClpX C4-type zinc finger C4J88_RS16850 PF10431 C-terminal, D2-small domain, of ClpB protein C4J88_RS16850 PF07724 AAA domain (Cdc48 subfamily) C4J88_RS16855 PF00574 Clp protease C4J88_RS16860 PF05698 Bacterial trigger factor protein (TF) C-terminus C4J88_RS16860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J88_RS16860 PF05697 Bacterial trigger factor protein (TF) C4J88_RS16885 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C4J88_RS16885 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C4J88_RS16890 PF00768 D-alanyl-D-alanine carboxypeptidase C4J88_RS16895 PF01609 Transposase DDE domain C4J88_RS16910 PF00873 AcrB/AcrD/AcrF family C4J88_RS16915 PF13533 Biotin-lipoyl like C4J88_RS16920 PF02321 Outer membrane efflux protein C4J88_RS16925 PF01546 Peptidase family M20/M25/M40 C4J88_RS16925 PF07687 Peptidase dimerisation domain C4J88_RS16930 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J88_RS16935 PF01979 Amidohydrolase family C4J88_RS16940 PF13247 4Fe-4S dicluster domain C4J88_RS16940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4J88_RS16940 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS16945 PF01180 Dihydroorotate dehydrogenase C4J88_RS16950 PF08362 YcdC-like protein, C-terminal region C4J88_RS16950 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS16955 PF04234 CopC domain C4J88_RS16965 PF03573 outer membrane porin, OprD family C4J88_RS16970 PF01370 NAD dependent epimerase/dehydratase family C4J88_RS16975 PF08450 SMP-30/Gluconolactonase/LRE-like region C4J88_RS16980 PF03480 Bacterial extracellular solute-binding protein, family 7 C4J88_RS16990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C4J88_RS17000 PF13533 Biotin-lipoyl like C4J88_RS17025 PF00753 Metallo-beta-lactamase superfamily C4J88_RS17030 PF01037 Lrp/AsnC ligand binding domain C4J88_RS17035 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal C4J88_RS17035 PF00676 Dehydrogenase E1 component C4J88_RS17040 PF02779 Transketolase, pyrimidine binding domain C4J88_RS17040 PF02780 Transketolase, C-terminal domain C4J88_RS17045 PF02817 e3 binding domain C4J88_RS17045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4J88_RS17045 PF00364 Biotin-requiring enzyme C4J88_RS17050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4J88_RS17050 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS17055 PF01063 Amino-transferase class IV C4J88_RS17060 PF00583 Acetyltransferase (GNAT) family C4J88_RS17080 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) C4J88_RS17090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4J88_RS17095 PF12704 MacB-like periplasmic core domain C4J88_RS17095 PF02687 FtsX-like permease family C4J88_RS17095 PF00005 ABC transporter C4J88_RS17110 PF07729 FCD domain C4J88_RS17110 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS17120 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS17130 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4J88_RS17130 PF00005 ABC transporter C4J88_RS17135 PF00005 ABC transporter C4J88_RS17140 PF07687 Peptidase dimerisation domain C4J88_RS17140 PF01546 Peptidase family M20/M25/M40 C4J88_RS17145 PF01425 Amidase C4J88_RS17150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS17150 PF03466 LysR substrate binding domain C4J88_RS17155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J88_RS17155 PF00356 Bacterial regulatory proteins, lacI family C4J88_RS17165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4J88_RS17165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4J88_RS17170 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS17170 PF00107 Zinc-binding dehydrogenase C4J88_RS17175 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS17180 PF00005 ABC transporter C4J88_RS17185 PF13407 Periplasmic binding protein domain C4J88_RS17205 PF00005 ABC transporter C4J88_RS17215 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C4J88_RS17220 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C4J88_RS17245 PF03466 LysR substrate binding domain C4J88_RS17245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS17250 PF03466 LysR substrate binding domain C4J88_RS17255 PF02798 Glutathione S-transferase, N-terminal domain C4J88_RS17260 PF00248 Aldo/keto reductase family C4J88_RS17285 PF01042 Endoribonuclease L-PSP C4J88_RS17290 PF01593 Flavin containing amine oxidoreductase C4J88_RS17295 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS17300 PF00005 ABC transporter C4J88_RS17305 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS17310 PF00593 TonB dependent receptor C4J88_RS17310 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS17315 PF03958 Bacterial type II/III secretion system short domain C4J88_RS17315 PF00263 Bacterial type II and III secretion system protein C4J88_RS17330 PF05137 Fimbrial assembly protein (PilN) C4J88_RS17335 PF03934 Type II secretion system (T2SS), protein K C4J88_RS17350 PF12019 Type II transport protein GspH C4J88_RS17350 PF07963 Prokaryotic N-terminal methylation motif C4J88_RS17355 PF08334 Type II secretion system (T2SS), protein G C4J88_RS17360 PF00482 Type II secretion system (T2SS), protein F C4J88_RS17365 PF00437 Type II/IV secretion system protein C4J88_RS17365 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C4J88_RS17410 PF07693 KAP family P-loop domain C4J88_RS17435 PF00216 Bacterial DNA-binding protein C4J88_RS17440 PF01588 Putative tRNA binding domain C4J88_RS17440 PF03484 tRNA synthetase B5 domain C4J88_RS17440 PF03147 Ferredoxin-fold anticodon binding domain C4J88_RS17440 PF03483 B3/4 domain C4J88_RS17440 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C4J88_RS17445 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C4J88_RS17445 PF01409 tRNA synthetases class II core domain (F) C4J88_RS17450 PF00453 Ribosomal protein L20 C4J88_RS17455 PF01632 Ribosomal protein L35 C4J88_RS17460 PF05198 Translation initiation factor IF-3, N-terminal domain C4J88_RS17460 PF00707 Translation initiation factor IF-3, C-terminal domain C4J88_RS17465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J88_RS17465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4J88_RS17465 PF02824 TGS domain C4J88_RS17465 PF03129 Anticodon binding domain C4J88_RS17475 PF00313 'Cold-shock' DNA-binding domain C4J88_RS17495 PF01156 Inosine-uridine preferring nucleoside hydrolase C4J88_RS17500 PF05025 RbsD / FucU transport protein family C4J88_RS17505 PF00294 pfkB family carbohydrate kinase C4J88_RS17510 PF00356 Bacterial regulatory proteins, lacI family C4J88_RS17515 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS17520 PF00005 ABC transporter C4J88_RS17525 PF13407 Periplasmic binding protein domain C4J88_RS17530 PF17763 Glutaminase/Asparaginase C-terminal domain C4J88_RS17530 PF00710 Asparaginase, N-terminal C4J88_RS17540 PF04231 Endonuclease I C4J88_RS17550 PF02599 Global regulator protein family C4J88_RS17560 PF13419 Haloacid dehalogenase-like hydrolase C4J88_RS17570 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS17570 PF00072 Response regulator receiver domain C4J88_RS17575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS17575 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS17575 PF00672 HAMP domain C4J88_RS17595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J88_RS17595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J88_RS17600 PF00501 AMP-binding enzyme C4J88_RS17600 PF00668 Condensation domain C4J88_RS17600 PF00551 Formyl transferase C4J88_RS17600 PF00550 Phosphopantetheine attachment site C4J88_RS17600 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS17605 PF00459 Inositol monophosphatase family C4J88_RS17630 PF00266 Aminotransferase class-V C4J88_RS17635 PF00266 Aminotransferase class-V C4J88_RS17645 PF00155 Aminotransferase class I and II C4J88_RS17660 PF00155 Aminotransferase class I and II C4J88_RS17680 PF01266 FAD dependent oxidoreductase C4J88_RS17705 PF01053 Cys/Met metabolism PLP-dependent enzyme C4J88_RS17710 PF00156 Phosphoribosyl transferase domain C4J88_RS17715 PF02674 Colicin V production protein C4J88_RS17720 PF05036 Sporulation related domain C4J88_RS17725 PF08245 Mur ligase middle domain C4J88_RS17725 PF02875 Mur ligase family, glutamate ligase domain C4J88_RS17730 PF17848 Acetyl-coA carboxylase zinc finger domain C4J88_RS17730 PF01039 Carboxyl transferase domain C4J88_RS17735 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C4J88_RS17740 PF01416 tRNA pseudouridine synthase C4J88_RS17750 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4J88_RS17750 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4J88_RS17755 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4J88_RS17755 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4J88_RS17760 PF00180 Isocitrate/isopropylmalate dehydrogenase C4J88_RS17765 PF08241 Methyltransferase domain C4J88_RS17770 PF00694 Aconitase C-terminal domain C4J88_RS17775 PF00330 Aconitase family (aconitate hydratase) C4J88_RS17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS17785 PF00563 EAL domain C4J88_RS17785 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS17785 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS17800 PF01207 Dihydrouridine synthase (Dus) C4J88_RS17810 PF00561 alpha/beta hydrolase fold C4J88_RS17840 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4J88_RS17845 PF04851 Type III restriction enzyme, res subunit C4J88_RS17845 PF02151 UvrB/uvrC motif C4J88_RS17845 PF17757 UvrB interaction domain C4J88_RS17845 PF00271 Helicase conserved C-terminal domain C4J88_RS17845 PF12344 Ultra-violet resistance protein B C4J88_RS17850 PF00155 Aminotransferase class I and II C4J88_RS17860 PF03466 LysR substrate binding domain C4J88_RS17860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS17865 PF00171 Aldehyde dehydrogenase family C4J88_RS17875 PF01447 Thermolysin metallopeptidase, catalytic domain C4J88_RS17875 PF16485 Protealysin propeptide C4J88_RS17875 PF02868 Thermolysin metallopeptidase, alpha-helical domain C4J88_RS17880 PF01223 DNA/RNA non-specific endonuclease C4J88_RS17885 PF01497 Periplasmic binding protein C4J88_RS17890 PF01032 FecCD transport family C4J88_RS17895 PF00005 ABC transporter C4J88_RS17900 PF00072 Response regulator receiver domain C4J88_RS17900 PF13426 PAS domain C4J88_RS17900 PF08448 PAS fold C4J88_RS17900 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS17900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS17910 PF03073 TspO/MBR family C4J88_RS17955 PF01252 Signal peptidase (SPase) II C4J88_RS17965 PF03466 LysR substrate binding domain C4J88_RS17965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS17970 PF01042 Endoribonuclease L-PSP C4J88_RS18000 PF07690 Major Facilitator Superfamily C4J88_RS18005 PF01361 Tautomerase enzyme C4J88_RS18010 PF00975 Thioesterase domain C4J88_RS18010 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS18010 PF00501 AMP-binding enzyme C4J88_RS18010 PF00550 Phosphopantetheine attachment site C4J88_RS18010 PF00975 Thioesterase domain C4J88_RS18010 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS18010 PF00668 Condensation domain C4J88_RS18010 PF00668 Condensation domain C4J88_RS18010 PF00550 Phosphopantetheine attachment site C4J88_RS18010 PF00501 AMP-binding enzyme C4J88_RS18020 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C4J88_RS18020 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C4J88_RS18025 PF16925 Tetracyclin repressor-like, C-terminal domain C4J88_RS18025 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS18055 PF04134 Protein of unknown function, DUF393 C4J88_RS18095 PF00083 Sugar (and other) transporter C4J88_RS18105 PF00324 Amino acid permease C4J88_RS18130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS18130 PF00672 HAMP domain C4J88_RS18135 PF04816 tRNA (adenine(22)-N(1))-methyltransferase C4J88_RS18140 PF07729 FCD domain C4J88_RS18140 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS18145 PF07690 Major Facilitator Superfamily C4J88_RS18150 PF13378 Enolase C-terminal domain-like C4J88_RS18150 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J88_RS18155 PF01609 Transposase DDE domain C4J88_RS18180 PF04143 Sulphur transport C4J88_RS18185 PF02583 Metal-sensitive transcriptional repressor C4J88_RS18190 PF01545 Cation efflux family C4J88_RS18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS18200 PF03466 LysR substrate binding domain C4J88_RS18205 PF01070 FMN-dependent dehydrogenase C4J88_RS18210 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS18220 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS18220 PF00563 EAL domain C4J88_RS18220 PF08448 PAS fold C4J88_RS18225 PF00664 ABC transporter transmembrane region C4J88_RS18225 PF00005 ABC transporter C4J88_RS18235 PF17773 UPF0176 acylphosphatase like domain C4J88_RS18235 PF00581 Rhodanese-like domain C4J88_RS18240 PF18807 Tripartite Tc toxins repeat C4J88_RS18240 PF14431 YwqJ-like deaminase C4J88_RS18245 PF03538 Salmonella virulence plasmid 28.1kDa A protein C4J88_RS18250 PF18413 Neuraminidase-like domain C4J88_RS18250 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain C4J88_RS18255 PF12256 Insecticide toxin TcdB middle/N-terminal region C4J88_RS18255 PF12255 Insecticide toxin TcdB middle/C-terminal region C4J88_RS18255 PF03534 Salmonella virulence plasmid 65kDa B protein C4J88_RS18260 PF18807 Tripartite Tc toxins repeat C4J88_RS18260 PF05785 Rho-activating domain of cytotoxic necrotizing factor C4J88_RS18265 PF01722 BolA-like protein C4J88_RS18275 PF10415 Fumarase C C-terminus C4J88_RS18275 PF00206 Lyase C4J88_RS18285 PF00892 EamA-like transporter family C4J88_RS18300 PF00419 Fimbrial protein C4J88_RS18305 PF00419 Fimbrial protein C4J88_RS18320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J88_RS18320 PF02753 Pili assembly chaperone PapD, C-terminal domain C4J88_RS18325 PF13953 PapC C-terminal domain C4J88_RS18325 PF13954 PapC N-terminal domain C4J88_RS18325 PF00577 Outer membrane usher protein C4J88_RS18335 PF00419 Fimbrial protein C4J88_RS18340 PF01925 Sulfite exporter TauE/SafE C4J88_RS18345 PF03466 LysR substrate binding domain C4J88_RS18345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS18350 PF02803 Thiolase, C-terminal domain C4J88_RS18350 PF00108 Thiolase, N-terminal domain C4J88_RS18355 PF03976 Polyphosphate kinase 2 (PPK2) C4J88_RS18360 PF01266 FAD dependent oxidoreductase C4J88_RS18360 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C4J88_RS18365 PF00733 Asparagine synthase C4J88_RS18365 PF13537 Glutamine amidotransferase domain C4J88_RS18370 PF02875 Mur ligase family, glutamate ligase domain C4J88_RS18370 PF08245 Mur ligase middle domain C4J88_RS18370 PF08443 RimK-like ATP-grasp domain C4J88_RS18380 PF06794 Uncharacterised protein family (UPF0270) C4J88_RS18385 PF02599 Global regulator protein family C4J88_RS18390 PF00561 alpha/beta hydrolase fold C4J88_RS18390 PF00106 short chain dehydrogenase C4J88_RS18400 PF00884 Sulfatase C4J88_RS18425 PF03472 Autoinducer binding domain C4J88_RS18425 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS18430 PF03079 ARD/ARD' family C4J88_RS18435 PF12832 MFS_1 like family C4J88_RS18440 PF01264 Chorismate synthase C4J88_RS18445 PF12146 Serine aminopeptidase, S33 C4J88_RS18445 PF13026 Protein of unknown function (DUF3887) C4J88_RS18455 PF05175 Methyltransferase small domain C4J88_RS18470 PF01713 Smr domain C4J88_RS18475 PF01227 GTP cyclohydrolase I C4J88_RS18495 PF03600 Citrate transporter C4J88_RS18500 PF03466 LysR substrate binding domain C4J88_RS18500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS18505 PF02798 Glutathione S-transferase, N-terminal domain C4J88_RS18510 PF00860 Permease family C4J88_RS18520 PF00576 HIUase/Transthyretin family C4J88_RS18530 PF01522 Polysaccharide deacetylase C4J88_RS18535 PF09349 OHCU decarboxylase C4J88_RS18535 PF01014 Uricase C4J88_RS18540 PF03561 Allantoicase repeat C4J88_RS18545 PF04115 Ureidoglycolate lyase C4J88_RS18555 PF00860 Permease family C4J88_RS18570 PF03279 Bacterial lipid A biosynthesis acyltransferase C4J88_RS18575 PF03775 Septum formation inhibitor MinC, C-terminal domain C4J88_RS18575 PF05209 Septum formation inhibitor MinC, N-terminal domain C4J88_RS18580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J88_RS18585 PF03776 Septum formation topological specificity factor MinE C4J88_RS18590 PF00849 RNA pseudouridylate synthase C4J88_RS18595 PF02127 Aminopeptidase I zinc metalloprotease (M18) C4J88_RS18600 PF00924 Mechanosensitive ion channel C4J88_RS18605 PF03621 MbtH-like protein C4J88_RS18620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS18620 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS18625 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS18625 PF00072 Response regulator receiver domain C4J88_RS18630 PF02683 Cytochrome C biogenesis protein transmembrane region C4J88_RS18630 PF11412 Disulphide bond corrector protein DsbC C4J88_RS18635 PF00578 AhpC/TSA family C4J88_RS18640 PF13098 Thioredoxin-like domain C4J88_RS18650 PF00501 AMP-binding enzyme C4J88_RS18650 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS18650 PF00501 AMP-binding enzyme C4J88_RS18650 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS18650 PF00550 Phosphopantetheine attachment site C4J88_RS18650 PF00668 Condensation domain C4J88_RS18650 PF00668 Condensation domain C4J88_RS18650 PF00550 Phosphopantetheine attachment site C4J88_RS18655 PF00975 Thioesterase domain C4J88_RS18670 PF17932 Tetracyclin repressor-like, C-terminal domain C4J88_RS18670 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS18680 PF06865 Pyrimidine/purine nucleoside phosphorylase C4J88_RS18685 PF03476 MOSC N-terminal beta barrel domain C4J88_RS18685 PF03473 MOSC domain C4J88_RS18685 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J88_RS18700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS18700 PF07730 Histidine kinase C4J88_RS18700 PF05231 MASE1 C4J88_RS18705 PF00072 Response regulator receiver domain C4J88_RS18705 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS18710 PF00781 Diacylglycerol kinase catalytic domain C4J88_RS18720 PF01584 CheW-like domain C4J88_RS18730 PF13614 AAA domain C4J88_RS18735 PF00691 OmpA family C4J88_RS18735 PF13677 Membrane MotB of proton-channel complex MotA/MotB C4J88_RS18740 PF01618 MotA/TolQ/ExbB proton channel family C4J88_RS18745 PF01339 CheB methylesterase C4J88_RS18745 PF00072 Response regulator receiver domain C4J88_RS18750 PF00072 Response regulator receiver domain C4J88_RS18750 PF01627 Hpt domain C4J88_RS18750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS18750 PF02895 Signal transducing histidine kinase, homodimeric domain C4J88_RS18750 PF01584 CheW-like domain C4J88_RS18755 PF04344 Chemotaxis phosphatase, CheZ C4J88_RS18760 PF00072 Response regulator receiver domain C4J88_RS18765 PF04539 Sigma-70 region 3 C4J88_RS18765 PF04542 Sigma-70 region 2 C4J88_RS18765 PF04545 Sigma-70, region 4 C4J88_RS18770 PF10609 NUBPL iron-transfer P-loop NTPase C4J88_RS18775 PF00448 SRP54-type protein, GTPase domain C4J88_RS18780 PF00771 FHIPEP family C4J88_RS18795 PF01312 FlhB HrpN YscU SpaS Family C4J88_RS18800 PF01311 Bacterial export proteins, family 1 C4J88_RS18805 PF01313 Bacterial export proteins, family 3 C4J88_RS18810 PF00813 FliP family C4J88_RS18815 PF04347 Flagellar biosynthesis protein, FliO C4J88_RS18820 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J88_RS18825 PF02154 Flagellar motor switch protein FliM C4J88_RS18825 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J88_RS18845 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS18845 PF00072 Response regulator receiver domain C4J88_RS18850 PF13466 STAS domain C4J88_RS18860 PF18269 T3SS EscN ATPase C-terminal domain C4J88_RS18860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J88_RS18870 PF01706 FliG C-terminal domain C4J88_RS18870 PF14841 FliG middle domain C4J88_RS18870 PF14842 FliG N-terminal domain C4J88_RS18875 PF08345 Flagellar M-ring protein C-terminal C4J88_RS18875 PF01514 Secretory protein of YscJ/FliF family C4J88_RS18880 PF02049 Flagellar hook-basal body complex protein FliE C4J88_RS18885 PF00072 Response regulator receiver domain C4J88_RS18885 PF00158 Sigma-54 interaction domain C4J88_RS18885 PF02954 Bacterial regulatory protein, Fis family C4J88_RS18890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS18890 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS18890 PF13188 PAS domain C4J88_RS18895 PF06490 Flagellar regulatory protein FleQ C4J88_RS18895 PF00158 Sigma-54 interaction domain C4J88_RS18895 PF02954 Bacterial regulatory protein, Fis family C4J88_RS18905 PF02561 Flagellar protein FliS C4J88_RS18910 PF07196 Flagellin hook IN motif C4J88_RS18910 PF02465 Flagellar hook-associated protein 2 N-terminus C4J88_RS18910 PF07195 Flagellar hook-associated protein 2 C-terminus C4J88_RS18920 PF00700 Bacterial flagellin C-terminal helical region C4J88_RS18920 PF07196 Flagellin hook IN motif C4J88_RS18920 PF00669 Bacterial flagellin N-terminal helical region C4J88_RS18925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C4J88_RS18925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C4J88_RS18935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J88_RS18935 PF00460 Flagella basal body rod protein C4J88_RS18940 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C4J88_RS18940 PF10135 Rod binding protein C4J88_RS18945 PF02119 Flagellar P-ring protein C4J88_RS18950 PF02107 Flagellar L-ring protein C4J88_RS18955 PF00460 Flagella basal body rod protein C4J88_RS18955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J88_RS18960 PF00460 Flagella basal body rod protein C4J88_RS18960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J88_RS18965 PF00158 Sigma-54 interaction domain C4J88_RS18965 PF18024 Helix-turn-helix domain C4J88_RS18970 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C4J88_RS18975 PF01329 Pterin 4 alpha carbinolamine dehydratase C4J88_RS18980 PF00155 Aminotransferase class I and II C4J88_RS18990 PF12852 Cupin C4J88_RS18990 PF12833 Helix-turn-helix domain C4J88_RS19005 PF01734 Patatin-like phospholipase C4J88_RS19010 PF01047 MarR family C4J88_RS19015 PF00270 DEAD/DEAH box helicase C4J88_RS19015 PF00271 Helicase conserved C-terminal domain C4J88_RS19015 PF00570 HRDC domain C4J88_RS19015 PF16124 RecQ zinc-binding C4J88_RS19015 PF09382 RQC domain C4J88_RS19025 PF04304 Protein of unknown function (DUF454) C4J88_RS19030 PF00072 Response regulator receiver domain C4J88_RS19030 PF01627 Hpt domain C4J88_RS19030 PF00672 HAMP domain C4J88_RS19030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS19030 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS19040 PF02646 RmuC family C4J88_RS19070 PF00255 Glutathione peroxidase C4J88_RS19085 PF02654 Cobalamin-5-phosphate synthase C4J88_RS19090 PF00300 Histidine phosphatase superfamily (branch 1) C4J88_RS19095 PF02277 Phosphoribosyltransferase C4J88_RS19100 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C4J88_RS19105 PF07685 CobB/CobQ-like glutamine amidotransferase domain C4J88_RS19105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J88_RS19110 PF00155 Aminotransferase class I and II C4J88_RS19115 PF03186 CobD/Cbib protein C4J88_RS19115 PF17113 Regulatory signalling modulator protein AmpE C4J88_RS19120 PF00881 Nitroreductase family C4J88_RS19125 PF07685 CobB/CobQ-like glutamine amidotransferase domain C4J88_RS19125 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4J88_RS19130 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C4J88_RS19130 PF12557 Cob(I)alamin adenosyltransferase N terminal C4J88_RS19135 PF07995 Glucose / Sorbosone dehydrogenase C4J88_RS19140 PF00877 NlpC/P60 family C4J88_RS19145 PF00877 NlpC/P60 family C4J88_RS19150 PF00308 Bacterial dnaA protein C4J88_RS19155 PF01594 AI-2E family transporter C4J88_RS19165 PF00586 AIR synthase related protein, N-terminal domain C4J88_RS19165 PF02769 AIR synthase related protein, C-terminal domain C4J88_RS19170 PF00551 Formyl transferase C4J88_RS19185 PF06276 Ferric iron reductase FhuF-like transporter C4J88_RS19185 PF04183 IucA / IucC family C4J88_RS19190 PF07690 Major Facilitator Superfamily C4J88_RS19195 PF00593 TonB dependent receptor C4J88_RS19195 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS19200 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) C4J88_RS19205 PF03819 MazG nucleotide pyrophosphohydrolase domain C4J88_RS19210 PF13291 ACT domain C4J88_RS19210 PF02824 TGS domain C4J88_RS19210 PF04607 Region found in RelA / SpoT proteins C4J88_RS19220 PF00291 Pyridoxal-phosphate dependent enzyme C4J88_RS19230 PF03466 LysR substrate binding domain C4J88_RS19230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS19235 PF00491 Arginase family C4J88_RS19250 PF00474 Sodium:solute symporter family C4J88_RS19260 PF03466 LysR substrate binding domain C4J88_RS19260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS19270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J88_RS19280 PF17783 CvfB-like winged helix domain C4J88_RS19280 PF13509 S1 domain C4J88_RS19310 PF00271 Helicase conserved C-terminal domain C4J88_RS19310 PF00270 DEAD/DEAH box helicase C4J88_RS19340 PF00892 EamA-like transporter family C4J88_RS19345 PF02525 Flavodoxin-like fold C4J88_RS19365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C4J88_RS19370 PF00005 ABC transporter C4J88_RS19370 PF00664 ABC transporter transmembrane region C4J88_RS19395 PF04542 Sigma-70 region 2 C4J88_RS19395 PF08281 Sigma-70, region 4 C4J88_RS19400 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C4J88_RS19400 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C4J88_RS19405 PF04408 Helicase associated domain (HA2) C4J88_RS19405 PF11898 Domain of unknown function (DUF3418) C4J88_RS19405 PF00270 DEAD/DEAH box helicase C4J88_RS19405 PF00271 Helicase conserved C-terminal domain C4J88_RS19405 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C4J88_RS19415 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C4J88_RS19425 PF08447 PAS fold C4J88_RS19425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS19435 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J88_RS19450 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J88_RS19450 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C4J88_RS19455 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J88_RS19470 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C4J88_RS19470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J88_RS19475 PF13746 4Fe-4S dicluster domain C4J88_RS19475 PF12801 4Fe-4S binding domain C4J88_RS19475 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C4J88_RS19485 PF00403 Heavy-metal-associated domain C4J88_RS19500 PF06969 HemN C-terminal domain C4J88_RS19500 PF04055 Radical SAM superfamily C4J88_RS19510 PF00027 Cyclic nucleotide-binding domain C4J88_RS19510 PF13545 Crp-like helix-turn-helix domain C4J88_RS19515 PF00156 Phosphoribosyl transferase domain C4J88_RS19520 PF13662 Toprim domain C4J88_RS19520 PF02132 RecR protein C4J88_RS19525 PF16884 N-terminal domain of oxidoreductase C4J88_RS19525 PF00107 Zinc-binding dehydrogenase C4J88_RS19530 PF02575 YbaB/EbfC DNA-binding family C4J88_RS19535 PF12170 DNA polymerase III tau subunit V interacting with alpha C4J88_RS19535 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C4J88_RS19535 PF12169 DNA polymerase III subunits gamma and tau domain III C4J88_RS19560 PF15887 Putative zinc-binding metallo-peptidase C4J88_RS19560 PF10005 zinc-ribbon domain C4J88_RS19565 PF03120 NAD-dependent DNA ligase OB-fold domain C4J88_RS19565 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C4J88_RS19565 PF01653 NAD-dependent DNA ligase adenylation domain C4J88_RS19565 PF12826 Helix-hairpin-helix motif C4J88_RS19565 PF00533 BRCA1 C Terminus (BRCT) domain C4J88_RS19570 PF04354 ZipA, C-terminal FtsZ-binding domain C4J88_RS19575 PF02463 RecF/RecN/SMC N terminal domain C4J88_RS19585 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J88_RS19585 PF01799 [2Fe-2S] binding domain C4J88_RS19590 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J88_RS19590 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C4J88_RS19600 PF01979 Amidohydrolase family C4J88_RS19605 PF12833 Helix-turn-helix domain C4J88_RS19605 PF06719 AraC-type transcriptional regulator N-terminus C4J88_RS19615 PF03435 Saccharopine dehydrogenase NADP binding domain C4J88_RS19620 PF06719 AraC-type transcriptional regulator N-terminus C4J88_RS19620 PF12833 Helix-turn-helix domain C4J88_RS19630 PF07729 FCD domain C4J88_RS19630 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS19635 PF03594 Benzoate membrane transport protein C4J88_RS19640 PF04320 Protein with unknown function (DUF469) C4J88_RS19650 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS19655 PF01170 Putative RNA methylase family UPF0020 C4J88_RS19655 PF02926 THUMP domain C4J88_RS19655 PF10672 S-adenosylmethionine-dependent methyltransferase C4J88_RS19660 PF04957 Ribosome modulation factor C4J88_RS19665 PF01180 Dihydroorotate dehydrogenase C4J88_RS19670 PF01464 Transglycosylase SLT domain C4J88_RS19675 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS19680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C4J88_RS19685 PF03958 Bacterial type II/III secretion system short domain C4J88_RS19685 PF00263 Bacterial type II and III secretion system protein C4J88_RS19690 PF00005 ABC transporter C4J88_RS19695 PF03861 ANTAR domain C4J88_RS19695 PF08376 Nitrate and nitrite sensing C4J88_RS19700 PF07690 Major Facilitator Superfamily C4J88_RS19705 PF00069 Protein kinase domain C4J88_RS19705 PF13191 AAA ATPase domain C4J88_RS19710 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS19710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4J88_RS19710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4J88_RS19710 PF18267 Rubredoxin NAD+ reductase C-terminal domain C4J88_RS19710 PF04324 BFD-like [2Fe-2S] binding domain C4J88_RS19715 PF00355 Rieske [2Fe-2S] domain C4J88_RS19720 PF01568 Molydopterin dinucleotide binding domain C4J88_RS19720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4J88_RS19720 PF00384 Molybdopterin oxidoreductase C4J88_RS19720 PF04324 BFD-like [2Fe-2S] binding domain C4J88_RS19725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4J88_RS19730 PF00691 OmpA family C4J88_RS19730 PF05736 OprF membrane domain C4J88_RS19750 PF01544 CorA-like Mg2+ transporter protein C4J88_RS19755 PF03737 Aldolase/RraA C4J88_RS19765 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C4J88_RS19765 PF02896 PEP-utilising enzyme, TIM barrel domain C4J88_RS19765 PF00391 PEP-utilising enzyme, mobile domain C4J88_RS19770 PF03618 Kinase/pyrophosphorylase C4J88_RS19775 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS19775 PF00155 Aminotransferase class I and II C4J88_RS19780 PF00892 EamA-like transporter family C4J88_RS19785 PF00581 Rhodanese-like domain C4J88_RS19785 PF00899 ThiF family C4J88_RS19790 PF00291 Pyridoxal-phosphate dependent enzyme C4J88_RS19795 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS19800 PF02272 DHHA1 domain C4J88_RS19800 PF01411 tRNA synthetases class II (A) C4J88_RS19800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J88_RS19805 PF03972 MmgE/PrpD family C4J88_RS19810 PF04303 PrpF protein C4J88_RS19815 PF00694 Aconitase C-terminal domain C4J88_RS19815 PF00330 Aconitase family (aconitate hydratase) C4J88_RS19820 PF00285 Citrate synthase, C-terminal domain C4J88_RS19830 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS19830 PF07729 FCD domain C4J88_RS19835 PF18030 RimK PreATP-grasp domain C4J88_RS19835 PF08443 RimK-like ATP-grasp domain C4J88_RS19845 PF08443 RimK-like ATP-grasp domain C4J88_RS19845 PF18030 RimK PreATP-grasp domain C4J88_RS19850 PF00425 chorismate binding enzyme C4J88_RS19850 PF04715 Anthranilate synthase component I, N terminal region C4J88_RS19870 PF01507 Phosphoadenosine phosphosulfate reductase family C4J88_RS19875 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4J88_RS19880 PF01177 Asp/Glu/Hydantoin racemase C4J88_RS19885 PF03466 LysR substrate binding domain C4J88_RS19885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS19895 PF13419 Haloacid dehalogenase-like hydrolase C4J88_RS19930 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA C4J88_RS19935 PF00360 Phytochrome region C4J88_RS19935 PF00563 EAL domain C4J88_RS19935 PF01590 GAF domain C4J88_RS19935 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS19950 PF01553 Acyltransferase C4J88_RS19955 PF01544 CorA-like Mg2+ transporter protein C4J88_RS19960 PF00958 GMP synthase C terminal domain C4J88_RS19960 PF00117 Glutamine amidotransferase class-I C4J88_RS19960 PF02540 NAD synthase C4J88_RS19965 PF00378 Enoyl-CoA hydratase/isomerase C4J88_RS19965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J88_RS19965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J88_RS19970 PF00108 Thiolase, N-terminal domain C4J88_RS19970 PF02803 Thiolase, C-terminal domain C4J88_RS19980 PF08379 Bacterial transglutaminase-like N-terminal region C4J88_RS19980 PF01841 Transglutaminase-like superfamily C4J88_RS19985 PF14403 Circularly permuted ATP-grasp type 2 C4J88_RS19985 PF04168 A predicted alpha-helical domain with a conserved ER motif. C4J88_RS19990 PF14403 Circularly permuted ATP-grasp type 2 C4J88_RS20005 PF01852 START domain C4J88_RS20010 PF03692 Putative zinc- or iron-chelating domain C4J88_RS20020 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS20020 PF00155 Aminotransferase class I and II C4J88_RS20025 PF05736 OprF membrane domain C4J88_RS20025 PF00691 OmpA family C4J88_RS20040 PF00766 Electron transfer flavoprotein FAD-binding domain C4J88_RS20040 PF01012 Electron transfer flavoprotein domain C4J88_RS20045 PF01012 Electron transfer flavoprotein domain C4J88_RS20055 PF12833 Helix-turn-helix domain C4J88_RS20055 PF06719 AraC-type transcriptional regulator N-terminus C4J88_RS20060 PF00107 Zinc-binding dehydrogenase C4J88_RS20060 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS20065 PF09339 IclR helix-turn-helix domain C4J88_RS20065 PF01614 Bacterial transcriptional regulator C4J88_RS20070 PF02653 Branched-chain amino acid transport system / permease component C4J88_RS20075 PF00005 ABC transporter C4J88_RS20080 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J88_RS20110 PF00294 pfkB family carbohydrate kinase C4J88_RS20120 PF03747 ADP-ribosylglycohydrolase C4J88_RS20125 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS20125 PF07702 UTRA domain C4J88_RS20140 PF06463 Molybdenum Cofactor Synthesis C C4J88_RS20140 PF04055 Radical SAM superfamily C4J88_RS20145 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS20150 PF01026 TatD related DNase C4J88_RS20155 PF09115 DNA polymerase III, delta subunit, C terminal C4J88_RS20160 PF02223 Thymidylate kinase C4J88_RS20165 PF02618 YceG-like family C4J88_RS20170 PF01063 Amino-transferase class IV C4J88_RS20175 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J88_RS20175 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J88_RS20180 PF00550 Phosphopantetheine attachment site C4J88_RS20190 PF00698 Acyl transferase domain C4J88_RS20195 PF02504 Fatty acid synthesis protein C4J88_RS20200 PF01783 Ribosomal L32p protein family C4J88_RS20205 PF02620 Large ribosomal RNA subunit accumulation protein YceD C4J88_RS20210 PF02545 Maf-like protein C4J88_RS20215 PF06965 Na+/H+ antiporter 1 C4J88_RS20215 PF01343 Peptidase family S49 C4J88_RS20220 PF13419 Haloacid dehalogenase-like hydrolase C4J88_RS20225 PF01479 S4 domain C4J88_RS20225 PF00849 RNA pseudouridylate synthase C4J88_RS20230 PF00575 S1 RNA binding domain C4J88_RS20230 PF10150 Ribonuclease E/G family C4J88_RS20230 PF12111 Polyribonucleotide phosphorylase C terminal C4J88_RS20235 PF12804 MobA-like NTP transferase domain C4J88_RS20235 PF14602 Hexapeptide repeat of succinyl-transferase C4J88_RS20235 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS20240 PF02625 XdhC and CoxI family C4J88_RS20240 PF13478 XdhC Rossmann domain C4J88_RS20245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J88_RS20250 PF01799 [2Fe-2S] binding domain C4J88_RS20250 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J88_RS20255 PF00375 Sodium:dicarboxylate symporter family C4J88_RS20260 PF12833 Helix-turn-helix domain C4J88_RS20260 PF02311 AraC-like ligand binding domain C4J88_RS20265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS20270 PF00072 Response regulator receiver domain C4J88_RS20270 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS20280 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C4J88_RS20280 PF01648 4'-phosphopantetheinyl transferase superfamily C4J88_RS20285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS20285 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS20285 PF00672 HAMP domain C4J88_RS20290 PF00072 Response regulator receiver domain C4J88_RS20290 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS20295 PF00317 Ribonucleotide reductase, all-alpha domain C4J88_RS20295 PF02867 Ribonucleotide reductase, barrel domain C4J88_RS20295 PF03477 ATP cone domain C4J88_RS20305 PF07559 Flagellar basal body protein FlaE C4J88_RS20305 PF00460 Flagella basal body rod protein C4J88_RS20305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J88_RS20310 PF13860 FlgD Ig-like domain C4J88_RS20310 PF03963 Flagellar hook capping protein - N-terminal region C4J88_RS20310 PF13861 FlgD Tudor-like domain C4J88_RS20315 PF00460 Flagella basal body rod protein C4J88_RS20315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C4J88_RS20320 PF00460 Flagella basal body rod protein C4J88_RS20325 PF03705 CheR methyltransferase, all-alpha domain C4J88_RS20325 PF01739 CheR methyltransferase, SAM binding domain C4J88_RS20330 PF00072 Response regulator receiver domain C4J88_RS20330 PF01584 CheW-like domain C4J88_RS20350 PF07238 PilZ domain C4J88_RS20350 PF07317 Flagellar regulator YcgR C4J88_RS20355 PF07690 Major Facilitator Superfamily C4J88_RS20405 PF03869 Arc-like DNA binding domain C4J88_RS20410 PF01769 Divalent cation transporter C4J88_RS20410 PF03448 MgtE intracellular N domain C4J88_RS20410 PF00571 CBS domain C4J88_RS20430 PF02599 Global regulator protein family C4J88_RS20435 PF01842 ACT domain C4J88_RS20435 PF00696 Amino acid kinase family C4J88_RS20435 PF13840 ACT domain C4J88_RS20440 PF02272 DHHA1 domain C4J88_RS20440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4J88_RS20440 PF01411 tRNA synthetases class II (A) C4J88_RS20445 PF01212 Beta-eliminating lyase C4J88_RS20450 PF00885 6,7-dimethyl-8-ribityllumazine synthase C4J88_RS20455 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C4J88_RS20465 PF04996 Succinylarginine dihydrolase C4J88_RS20470 PF00171 Aldehyde dehydrogenase family C4J88_RS20475 PF04958 Arginine N-succinyltransferase beta subunit C4J88_RS20480 PF04958 Arginine N-succinyltransferase beta subunit C4J88_RS20485 PF00202 Aminotransferase class-III C4J88_RS20495 PF12833 Helix-turn-helix domain C4J88_RS20505 PF00005 ABC transporter C4J88_RS20515 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS20520 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS20525 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS20535 PF16177 Acetyl-coenzyme A synthetase N-terminus C4J88_RS20535 PF00501 AMP-binding enzyme C4J88_RS20535 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS20545 PF00268 Ribonucleotide reductase, small chain C4J88_RS20570 PF01850 PIN domain C4J88_RS20575 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C4J88_RS20590 PF01425 Amidase C4J88_RS20600 PF12706 Beta-lactamase superfamily domain C4J88_RS20610 PF08447 PAS fold C4J88_RS20610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS20610 PF13426 PAS domain C4J88_RS20625 PF06418 CTP synthase N-terminus C4J88_RS20625 PF00117 Glutamine amidotransferase class-I C4J88_RS20630 PF03992 Antibiotic biosynthesis monooxygenase C4J88_RS20640 PF03009 Glycerophosphoryl diester phosphodiesterase family C4J88_RS20655 PF01384 Phosphate transporter family C4J88_RS20660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS20660 PF03466 LysR substrate binding domain C4J88_RS20675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS20675 PF03466 LysR substrate binding domain C4J88_RS20680 PF04542 Sigma-70 region 2 C4J88_RS20680 PF08281 Sigma-70, region 4 C4J88_RS20685 PF03795 YCII-related domain C4J88_RS20720 PF00155 Aminotransferase class I and II C4J88_RS20725 PF02447 GntP family permease C4J88_RS20735 PF00356 Bacterial regulatory proteins, lacI family C4J88_RS20735 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C4J88_RS20740 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C4J88_RS20740 PF01409 tRNA synthetases class II core domain (F) C4J88_RS20765 PF00083 Sugar (and other) transporter C4J88_RS20775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS20775 PF03466 LysR substrate binding domain C4J88_RS20780 PF02798 Glutathione S-transferase, N-terminal domain C4J88_RS20780 PF00043 Glutathione S-transferase, C-terminal domain C4J88_RS20785 PF09084 NMT1/THI5 like C4J88_RS20795 PF01327 Polypeptide deformylase C4J88_RS20800 PF03631 Virulence factor BrkB C4J88_RS20805 PF05532 CsbD-like C4J88_RS20815 PF00501 AMP-binding enzyme C4J88_RS20815 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS20820 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS20820 PF00501 AMP-binding enzyme C4J88_RS20830 PF01575 MaoC like domain C4J88_RS20840 PF12843 Putative quorum-sensing-regulated virulence factor C4J88_RS20845 PF00266 Aminotransferase class-V C4J88_RS20850 PF01081 KDPG and KHG aldolase C4J88_RS20855 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C4J88_RS20860 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C4J88_RS20860 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C4J88_RS20865 PF01380 SIS domain C4J88_RS20865 PF01418 Helix-turn-helix domain, rpiR family C4J88_RS20870 PF01263 Aldose 1-epimerase C4J88_RS20875 PF04966 Carbohydrate-selective porin, OprB family C4J88_RS20880 PF00005 ABC transporter C4J88_RS20880 PF03459 TOBE domain C4J88_RS20880 PF17912 MalK OB fold domain C4J88_RS20885 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS20890 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS20895 PF01547 Bacterial extracellular solute-binding protein C4J88_RS20910 PF01370 NAD dependent epimerase/dehydratase family C4J88_RS20915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS20915 PF03466 LysR substrate binding domain C4J88_RS20925 PF01810 LysE type translocator C4J88_RS20930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C4J88_RS20930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C4J88_RS20940 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS20940 PF00563 EAL domain C4J88_RS20940 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS20950 PF02386 Cation transport protein C4J88_RS20955 PF12833 Helix-turn-helix domain C4J88_RS20955 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4J88_RS20970 PF07690 Major Facilitator Superfamily C4J88_RS20975 PF00472 RF-1 domain C4J88_RS20980 PF00324 Amino acid permease C4J88_RS20990 PF00849 RNA pseudouridylate synthase C4J88_RS20990 PF01479 S4 domain C4J88_RS21000 PF04079 Segregation and condensation complex subunit ScpB C4J88_RS21005 PF02616 Segregation and condensation protein ScpA C4J88_RS21010 PF01300 Telomere recombination C4J88_RS21015 PF02811 PHP domain C4J88_RS21020 PF04279 Intracellular septation protein A C4J88_RS21025 PF03795 YCII-related domain C4J88_RS21035 PF00072 Response regulator receiver domain C4J88_RS21035 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS21045 PF08521 Two-component sensor kinase N-terminal C4J88_RS21045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS21045 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS21050 PF02515 CoA-transferase family III C4J88_RS21055 PF13520 Amino acid permease C4J88_RS21060 PF13520 Amino acid permease C4J88_RS21070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4J88_RS21070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4J88_RS21075 PF00696 Amino acid kinase family C4J88_RS21085 PF00158 Sigma-54 interaction domain C4J88_RS21085 PF18024 Helix-turn-helix domain C4J88_RS21090 PF01597 Glycine cleavage H-protein C4J88_RS21095 PF02347 Glycine cleavage system P-protein C4J88_RS21100 PF03315 Serine dehydratase beta chain C4J88_RS21100 PF03313 Serine dehydratase alpha chain C4J88_RS21105 PF01571 Aminomethyltransferase folate-binding domain C4J88_RS21105 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4J88_RS21110 PF00313 'Cold-shock' DNA-binding domain C4J88_RS21120 PF02445 Quinolinate synthetase A protein C4J88_RS21130 PF07690 Major Facilitator Superfamily C4J88_RS21135 PF13533 Biotin-lipoyl like C4J88_RS21140 PF02321 Outer membrane efflux protein C4J88_RS21150 PF00682 HMGL-like C4J88_RS21150 PF08502 LeuA allosteric (dimerisation) domain C4J88_RS21160 PF04055 Radical SAM superfamily C4J88_RS21165 PF16331 TolA binding protein trimerisation C4J88_RS21165 PF13525 Outer membrane lipoprotein C4J88_RS21170 PF00691 OmpA family C4J88_RS21175 PF04052 TolB amino-terminal domain C4J88_RS21175 PF07676 WD40-like Beta Propeller Repeat C4J88_RS21185 PF02472 Biopolymer transport protein ExbD/TolR C4J88_RS21190 PF01618 MotA/TolQ/ExbB proton channel family C4J88_RS21195 PF03061 Thioesterase superfamily C4J88_RS21205 PF05496 Holliday junction DNA helicase RuvB P-loop domain C4J88_RS21205 PF05491 RuvB C-terminal winged helix domain C4J88_RS21205 PF17864 RuvB AAA lid domain C4J88_RS21210 PF07499 RuvA, C-terminal domain C4J88_RS21210 PF01330 RuvA N terminal domain C4J88_RS21215 PF02075 Crossover junction endodeoxyribonuclease RuvC C4J88_RS21220 PF01709 Transcriptional regulator C4J88_RS21225 PF01336 OB-fold nucleic acid binding domain C4J88_RS21225 PF00152 tRNA synthetases class II (D, K and N) C4J88_RS21225 PF02938 GAD domain C4J88_RS21240 PF00210 Ferritin-like domain C4J88_RS21245 PF00313 'Cold-shock' DNA-binding domain C4J88_RS21250 PF04102 SlyX C4J88_RS21260 PF03573 outer membrane porin, OprD family C4J88_RS21265 PF00924 Mechanosensitive ion channel C4J88_RS21265 PF05552 Conserved TM helix C4J88_RS21270 PF04461 Protein of unknown function (DUF520) C4J88_RS21275 PF02558 Ketopantoate reductase PanE/ApbA C4J88_RS21275 PF08546 Ketopantoate reductase PanE/ApbA C terminal C4J88_RS21280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS21280 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS21280 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS21285 PF01923 Cobalamin adenosyltransferase C4J88_RS21295 PF00293 NUDIX domain C4J88_RS21300 PF01960 ArgJ family C4J88_RS21305 PF02810 SEC-C motif C4J88_RS21305 PF07517 SecA DEAD-like domain C4J88_RS21305 PF01043 SecA preprotein cross-linking domain C4J88_RS21305 PF07516 SecA Wing and Scaffold domain C4J88_RS21315 PF05872 Bacterial protein of unknown function (DUF853) C4J88_RS21320 PF02743 Cache domain C4J88_RS21320 PF00672 HAMP domain C4J88_RS21320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS21325 PF13439 Glycosyltransferase Family 4 C4J88_RS21325 PF00534 Glycosyl transferases group 1 C4J88_RS21340 PF00551 Formyl transferase C4J88_RS21340 PF01842 ACT domain C4J88_RS21350 PF00929 Exonuclease C4J88_RS21350 PF08411 Exonuclease C-terminal C4J88_RS21375 PF17863 AAA lid domain C4J88_RS21375 PF07726 ATPase family associated with various cellular activities (AAA) C4J88_RS21395 PF02887 Pyruvate kinase, alpha/beta domain C4J88_RS21395 PF00224 Pyruvate kinase, barrel domain C4J88_RS21400 PF00970 Oxidoreductase FAD-binding domain C4J88_RS21400 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J88_RS21400 PF00175 Oxidoreductase NAD-binding domain C4J88_RS21405 PF05683 Fumarase C-terminus C4J88_RS21405 PF05681 Fumarate hydratase (Fumerase) C4J88_RS21410 PF02743 Cache domain C4J88_RS21410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS21410 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS21415 PF00158 Sigma-54 interaction domain C4J88_RS21415 PF02954 Bacterial regulatory protein, Fis family C4J88_RS21415 PF00072 Response regulator receiver domain C4J88_RS21420 PF00083 Sugar (and other) transporter C4J88_RS21440 PF12833 Helix-turn-helix domain C4J88_RS21440 PF06719 AraC-type transcriptional regulator N-terminus C4J88_RS21445 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS21445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS21445 PF00672 HAMP domain C4J88_RS21450 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS21450 PF00072 Response regulator receiver domain C4J88_RS21455 PF02685 Glucokinase C4J88_RS21460 PF00920 Dehydratase family C4J88_RS21465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4J88_RS21465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4J88_RS21470 PF08281 Sigma-70, region 4 C4J88_RS21470 PF04542 Sigma-70 region 2 C4J88_RS21480 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS21480 PF00593 TonB dependent receptor C4J88_RS21485 PF01126 Heme oxygenase C4J88_RS21490 PF04304 Protein of unknown function (DUF454) C4J88_RS21495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS21495 PF00672 HAMP domain C4J88_RS21520 PF13533 Biotin-lipoyl like C4J88_RS21545 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS21545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS21545 PF00672 HAMP domain C4J88_RS21550 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS21550 PF00072 Response regulator receiver domain C4J88_RS21555 PF00884 Sulfatase C4J88_RS21565 PF00118 TCP-1/cpn60 chaperonin family C4J88_RS21570 PF00166 Chaperonin 10 Kd subunit C4J88_RS21575 PF04186 FxsA cytoplasmic membrane protein C4J88_RS21595 PF07690 Major Facilitator Superfamily C4J88_RS21600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4J88_RS21600 PF04073 Aminoacyl-tRNA editing domain C4J88_RS21600 PF03129 Anticodon binding domain C4J88_RS21615 PF11798 IMS family HHH motif C4J88_RS21615 PF00817 impB/mucB/samB family C4J88_RS21630 PF09924 Uncharacterised conserved protein (DUF2156) C4J88_RS21630 PF03706 Lysylphosphatidylglycerol synthase TM region C4J88_RS21640 PF01368 DHH family C4J88_RS21640 PF17768 RecJ OB domain C4J88_RS21640 PF02272 DHHA1 domain C4J88_RS21645 PF07152 YaeQ protein C4J88_RS21660 PF14821 Threonine synthase N terminus C4J88_RS21660 PF00291 Pyridoxal-phosphate dependent enzyme C4J88_RS21665 PF03447 Homoserine dehydrogenase, NAD binding domain C4J88_RS21665 PF01842 ACT domain C4J88_RS21665 PF00742 Homoserine dehydrogenase C4J88_RS21670 PF10411 Disulfide bond isomerase protein N-terminus C4J88_RS21670 PF13098 Thioredoxin-like domain C4J88_RS21675 PF00589 Phage integrase family C4J88_RS21675 PF02899 Phage integrase, N-terminal SAM-like domain C4J88_RS21685 PF01245 Ribosomal protein L19 C4J88_RS21690 PF01746 tRNA (Guanine-1)-methyltransferase C4J88_RS21695 PF01782 RimM N-terminal domain C4J88_RS21695 PF05239 PRC-barrel domain C4J88_RS21700 PF00886 Ribosomal protein S16 C4J88_RS21705 PF02881 SRP54-type protein, helical bundle domain C4J88_RS21705 PF02978 Signal peptide binding domain C4J88_RS21705 PF00448 SRP54-type protein, GTPase domain C4J88_RS21715 PF01595 Cyclin M transmembrane N-terminal domain C4J88_RS21715 PF03471 Transporter associated domain C4J88_RS21715 PF00571 CBS domain C4J88_RS21720 PF07690 Major Facilitator Superfamily C4J88_RS21720 PF00083 Sugar (and other) transporter C4J88_RS21730 PF02222 ATP-grasp domain C4J88_RS21750 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS21755 PF00293 NUDIX domain C4J88_RS21760 PF00293 NUDIX domain C4J88_RS21760 PF09297 NADH pyrophosphatase zinc ribbon domain C4J88_RS21770 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS21770 PF07702 UTRA domain C4J88_RS21775 PF01979 Amidohydrolase family C4J88_RS21780 PF01380 SIS domain C4J88_RS21785 PF00381 PTS HPr component phosphorylation site C4J88_RS21785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C4J88_RS21785 PF05524 PEP-utilising enzyme, N-terminal C4J88_RS21785 PF00391 PEP-utilising enzyme, mobile domain C4J88_RS21785 PF02896 PEP-utilising enzyme, TIM barrel domain C4J88_RS21790 PF00367 phosphotransferase system, EIIB C4J88_RS21790 PF02378 Phosphotransferase system, EIIC C4J88_RS21790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C4J88_RS21805 PF01784 NIF3 (NGG1p interacting factor 3) C4J88_RS21810 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C4J88_RS21810 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C4J88_RS21810 PF02769 AIR synthase related protein, C-terminal domain C4J88_RS21815 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS21815 PF01464 Transglycosylase SLT domain C4J88_RS21885 PF02463 RecF/RecN/SMC N terminal domain C4J88_RS21890 PF05199 GMC oxidoreductase C4J88_RS21890 PF00732 GMC oxidoreductase C4J88_RS21895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS21895 PF03466 LysR substrate binding domain C4J88_RS21910 PF03358 NADPH-dependent FMN reductase C4J88_RS21935 PF00589 Phage integrase family C4J88_RS21935 PF13356 Arm DNA-binding domain C4J88_RS21940 PF00117 Glutamine amidotransferase class-I C4J88_RS21940 PF00958 GMP synthase C terminal domain C4J88_RS21940 PF02540 NAD synthase C4J88_RS21945 PF00478 IMP dehydrogenase / GMP reductase domain C4J88_RS21945 PF00571 CBS domain C4J88_RS21960 PF13742 OB-fold nucleic acid binding domain C4J88_RS21960 PF02601 Exonuclease VII, large subunit C4J88_RS21965 PF01551 Peptidase family M23 C4J88_RS21965 PF01476 LysM domain C4J88_RS21965 PF08525 Opacity-associated protein A N-terminal motif C4J88_RS21975 PF08502 LeuA allosteric (dimerisation) domain C4J88_RS21975 PF00682 HMGL-like C4J88_RS21980 PF00795 Carbon-nitrogen hydrolase C4J88_RS21985 PF00155 Aminotransferase class I and II C4J88_RS21990 PF01926 50S ribosome-binding GTPase C4J88_RS21990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C4J88_RS21995 PF13360 PQQ-like domain C4J88_RS22005 PF13393 Histidyl-tRNA synthetase C4J88_RS22005 PF03129 Anticodon binding domain C4J88_RS22010 PF04551 GcpE protein C4J88_RS22015 PF13464 Domain of unknown function (DUF4115) C4J88_RS22025 PF04055 Radical SAM superfamily C4J88_RS22030 PF00334 Nucleoside diphosphate kinase C4J88_RS22040 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J88_RS22045 PF00012 Hsp70 protein C4J88_RS22050 PF07743 HSCB C-terminal oligomerisation domain C4J88_RS22050 PF00226 DnaJ domain C4J88_RS22055 PF01521 Iron-sulphur cluster biosynthesis C4J88_RS22060 PF01592 NifU-like N terminal domain C4J88_RS22065 PF00266 Aminotransferase class-V C4J88_RS22070 PF02082 Transcriptional regulator C4J88_RS22075 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS22080 PF00588 SpoU rRNA Methylase family C4J88_RS22085 PF00459 Inositol monophosphatase family C4J88_RS22090 PF05433 Glycine zipper 2TM domain C4J88_RS22095 PF02355 Protein export membrane protein C4J88_RS22095 PF07549 SecD/SecF GG Motif C4J88_RS22100 PF02355 Protein export membrane protein C4J88_RS22100 PF13721 SecD export protein N-terminal TM region C4J88_RS22100 PF07549 SecD/SecF GG Motif C4J88_RS22105 PF02699 Preprotein translocase subunit C4J88_RS22110 PF01702 Queuine tRNA-ribosyltransferase C4J88_RS22115 PF02547 Queuosine biosynthesis protein C4J88_RS22135 PF00313 'Cold-shock' DNA-binding domain C4J88_RS22155 PF00384 Molybdopterin oxidoreductase C4J88_RS22185 PF01810 LysE type translocator C4J88_RS22195 PF01810 LysE type translocator C4J88_RS22200 PF08000 Bacterial PH domain C4J88_RS22205 PF12728 Helix-turn-helix domain C4J88_RS22215 PF03513 Cloacin immunity protein C4J88_RS22225 PF00034 Cytochrome c C4J88_RS22240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS22240 PF00360 Phytochrome region C4J88_RS22240 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS22240 PF08446 PAS fold C4J88_RS22240 PF01590 GAF domain C4J88_RS22245 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS22245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS22245 PF00672 HAMP domain C4J88_RS22250 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS22250 PF00072 Response regulator receiver domain C4J88_RS22255 PF04333 MlaA lipoprotein C4J88_RS22270 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS22270 PF08448 PAS fold C4J88_RS22275 PF00202 Aminotransferase class-III C4J88_RS22280 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4J88_RS22285 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system C4J88_RS22295 PF00266 Aminotransferase class-V C4J88_RS22320 PF03472 Autoinducer binding domain C4J88_RS22320 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS22325 PF00155 Aminotransferase class I and II C4J88_RS22330 PF06508 Queuosine biosynthesis protein QueC C4J88_RS22335 PF01040 UbiA prenyltransferase family C4J88_RS22340 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C4J88_RS22345 PF00510 Cytochrome c oxidase subunit III C4J88_RS22350 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4J88_RS22355 PF06481 COX Aromatic Rich Motif C4J88_RS22355 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4J88_RS22365 PF02600 Disulfide bond formation protein DsbB C4J88_RS22370 PF00970 Oxidoreductase FAD-binding domain C4J88_RS22370 PF00042 Globin C4J88_RS22370 PF00175 Oxidoreductase NAD-binding domain C4J88_RS22375 PF02954 Bacterial regulatory protein, Fis family C4J88_RS22375 PF00158 Sigma-54 interaction domain C4J88_RS22385 PF12833 Helix-turn-helix domain C4J88_RS22385 PF06445 GyrI-like small molecule binding domain C4J88_RS22390 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS22390 PF00072 Response regulator receiver domain C4J88_RS22395 PF07044 Protein of unknown function (DUF1329) C4J88_RS22405 PF00106 short chain dehydrogenase C4J88_RS22410 PF00561 alpha/beta hydrolase fold C4J88_RS22415 PF00596 Class II Aldolase and Adducin N-terminal domain C4J88_RS22420 PF00258 Flavodoxin C4J88_RS22425 PF01740 STAS domain C4J88_RS22425 PF13426 PAS domain C4J88_RS22435 PF13411 MerR HTH family regulatory protein C4J88_RS22450 PF01227 GTP cyclohydrolase I C4J88_RS22455 PF02152 Dihydroneopterin aldolase C4J88_RS22470 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS22485 PF13439 Glycosyltransferase Family 4 C4J88_RS22485 PF00534 Glycosyl transferases group 1 C4J88_RS22490 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS22490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J88_RS22495 PF00255 Glutathione peroxidase C4J88_RS22500 PF05981 CreA protein C4J88_RS22505 PF01472 PUA domain C4J88_RS22505 PF00696 Amino acid kinase family C4J88_RS22510 PF01926 50S ribosome-binding GTPase C4J88_RS22510 PF01018 GTP1/OBG C4J88_RS22515 PF01016 Ribosomal L27 protein C4J88_RS22520 PF00829 Ribosomal prokaryotic L21 protein C4J88_RS22525 PF00348 Polyprenyl synthetase C4J88_RS22530 PF08274 PhnA Zinc-Ribbon C4J88_RS22530 PF03831 PhnA domain C4J88_RS22535 PF12804 MobA-like NTP transferase domain C4J88_RS22535 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS22540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J88_RS22540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J88_RS22545 PF03573 outer membrane porin, OprD family C4J88_RS22550 PF03466 LysR substrate binding domain C4J88_RS22550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS22555 PF03606 C4-dicarboxylate anaerobic carrier C4J88_RS22560 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C4J88_RS22560 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C4J88_RS22565 PF00672 HAMP domain C4J88_RS22565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS22565 PF16591 Helical bimodular sensor domain C4J88_RS22575 PF07969 Amidohydrolase family C4J88_RS22580 PF01380 SIS domain C4J88_RS22585 PF02447 GntP family permease C4J88_RS22595 PF01740 STAS domain C4J88_RS22595 PF00916 Sulfate permease family C4J88_RS22605 PF03466 LysR substrate binding domain C4J88_RS22605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS22615 PF03466 LysR substrate binding domain C4J88_RS22615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS22620 PF00324 Amino acid permease C4J88_RS22625 PF00266 Aminotransferase class-V C4J88_RS22630 PF01037 Lrp/AsnC ligand binding domain C4J88_RS22635 PF04444 Catechol dioxygenase N terminus C4J88_RS22635 PF00775 Dioxygenase C4J88_RS22640 PF02426 Muconolactone delta-isomerase C4J88_RS22645 PF13378 Enolase C-terminal domain-like C4J88_RS22645 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4J88_RS22650 PF03466 LysR substrate binding domain C4J88_RS22650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS22655 PF12833 Helix-turn-helix domain C4J88_RS22655 PF14525 AraC-binding-like domain C4J88_RS22660 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4J88_RS22660 PF00355 Rieske [2Fe-2S] domain C4J88_RS22665 PF00866 Ring hydroxylating beta subunit C4J88_RS22670 PF00970 Oxidoreductase FAD-binding domain C4J88_RS22670 PF00175 Oxidoreductase NAD-binding domain C4J88_RS22670 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J88_RS22675 PF00324 Amino acid permease C4J88_RS22680 PF03301 Tryptophan 2,3-dioxygenase C4J88_RS22685 PF04199 Putative cyclase C4J88_RS22700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4J88_RS22700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C4J88_RS22705 PF00171 Aldehyde dehydrogenase family C4J88_RS22710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS22710 PF03466 LysR substrate binding domain C4J88_RS22720 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS22720 PF00563 EAL domain C4J88_RS22720 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS22730 PF13538 UvrD-like helicase C-terminal domain C4J88_RS22735 PF00580 UvrD/REP helicase N-terminal domain C4J88_RS22735 PF12705 PD-(D/E)XK nuclease superfamily C4J88_RS22735 PF13361 UvrD-like helicase C-terminal domain C4J88_RS22740 PF17946 RecC C-terminal domain C4J88_RS22775 PF01794 Ferric reductase like transmembrane component C4J88_RS22780 PF00174 Oxidoreductase molybdopterin binding domain C4J88_RS22785 PF01066 CDP-alcohol phosphatidyltransferase C4J88_RS22790 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C4J88_RS22790 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C4J88_RS22795 PF10369 Small subunit of acetolactate synthase C4J88_RS22800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4J88_RS22800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4J88_RS22800 PF00205 Thiamine pyrophosphate enzyme, central domain C4J88_RS22805 PF04287 tRNA pseudouridine synthase C C4J88_RS22815 PF00905 Penicillin binding protein transpeptidase domain C4J88_RS22815 PF14814 Bifunctional transglycosylase second domain C4J88_RS22815 PF00912 Transglycosylase C4J88_RS22835 PF00005 ABC transporter C4J88_RS22840 PF01032 FecCD transport family C4J88_RS22845 PF01497 Periplasmic binding protein C4J88_RS22855 PF03749 Sugar fermentation stimulation protein RE domain C4J88_RS22855 PF17746 SfsA N-terminal OB domain C4J88_RS22860 PF00155 Aminotransferase class I and II C4J88_RS22865 PF01258 Prokaryotic dksA/traR C4-type zinc finger C4J88_RS22870 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4J88_RS22880 PF00989 PAS fold C4J88_RS22880 PF08447 PAS fold C4J88_RS22880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS22880 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS22885 PF00072 Response regulator receiver domain C4J88_RS22885 PF00158 Sigma-54 interaction domain C4J88_RS22885 PF02954 Bacterial regulatory protein, Fis family C4J88_RS22890 PF12627 Probable RNA and SrmB- binding site of polymerase A C4J88_RS22890 PF01743 Poly A polymerase head domain C4J88_RS22890 PF12626 Polymerase A arginine-rich C-terminus C4J88_RS22895 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C4J88_RS22900 PF02548 Ketopantoate hydroxymethyltransferase C4J88_RS22905 PF02569 Pantoate-beta-alanine ligase C4J88_RS22910 PF00342 Phosphoglucose isomerase C4J88_RS22915 PF16177 Acetyl-coenzyme A synthetase N-terminus C4J88_RS22915 PF13193 AMP-binding enzyme C-terminal domain C4J88_RS22915 PF00501 AMP-binding enzyme C4J88_RS22920 PF10672 S-adenosylmethionine-dependent methyltransferase C4J88_RS22920 PF17785 PUA-like domain C4J88_RS22930 PF04972 BON domain C4J88_RS22935 PF00013 KH domain C4J88_RS22935 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C4J88_RS22935 PF03725 3' exoribonuclease family, domain 2 C4J88_RS22935 PF01138 3' exoribonuclease family, domain 1 C4J88_RS22935 PF00575 S1 RNA binding domain C4J88_RS22940 PF00312 Ribosomal protein S15 C4J88_RS22945 PF01509 TruB family pseudouridylate synthase (N terminal domain) C4J88_RS22945 PF09157 Pseudouridine synthase II TruB, C-terminal C4J88_RS22945 PF16198 tRNA pseudouridylate synthase B C-terminal domain C4J88_RS22950 PF02033 Ribosome-binding factor A C4J88_RS22955 PF04760 Translation initiation factor IF-2, N-terminal region C4J88_RS22955 PF11987 Translation-initiation factor 2 C4J88_RS22955 PF00009 Elongation factor Tu GTP binding domain C4J88_RS22955 PF08364 Bacterial translation initiation factor IF-2 associated region C4J88_RS22960 PF13184 NusA-like KH domain C4J88_RS22960 PF00575 S1 RNA binding domain C4J88_RS22960 PF08529 NusA N-terminal domain C4J88_RS22965 PF02576 RimP N-terminal domain C4J88_RS22965 PF17384 RimP C-terminal SH3 domain C4J88_RS22980 PF03840 Preprotein translocase SecG subunit C4J88_RS22985 PF00121 Triosephosphate isomerase C4J88_RS22990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4J88_RS22990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4J88_RS22990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4J88_RS22990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4J88_RS22995 PF00809 Pterin binding enzyme C4J88_RS23000 PF17862 AAA+ lid domain C4J88_RS23000 PF00004 ATPase family associated with various cellular activities (AAA) C4J88_RS23000 PF06480 FtsH Extracellular C4J88_RS23000 PF01434 Peptidase family M41 C4J88_RS23005 PF01728 FtsJ-like methyltransferase C4J88_RS23010 PF01985 CRS1 / YhbY (CRM) domain C4J88_RS23020 PF03449 Transcription elongation factor, N-terminal C4J88_RS23020 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J88_RS23025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J88_RS23025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C4J88_RS23025 PF02142 MGS-like domain C4J88_RS23030 PF00117 Glutamine amidotransferase class-I C4J88_RS23030 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C4J88_RS23035 PF05173 Dihydrodipicolinate reductase, C-terminus C4J88_RS23035 PF01113 Dihydrodipicolinate reductase, N-terminus C4J88_RS23040 PF00226 DnaJ domain C4J88_RS23040 PF00684 DnaJ central domain C4J88_RS23040 PF01556 DnaJ C terminal domain C4J88_RS23045 PF00012 Hsp70 protein C4J88_RS23050 PF01025 GrpE C4J88_RS23055 PF02463 RecF/RecN/SMC N terminal domain C4J88_RS23060 PF01475 Ferric uptake regulator family C4J88_RS23065 PF04355 SmpA / OmlA family C4J88_RS23070 PF03658 RnfH family Ubiquitin C4J88_RS23075 PF03364 Polyketide cyclase / dehydrase and lipid transport C4J88_RS23080 PF01668 SmpB protein C4J88_RS23085 PF07729 FCD domain C4J88_RS23085 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS23090 PF02652 L-lactate permease C4J88_RS23110 PF00589 Phage integrase family C4J88_RS23110 PF13356 Arm DNA-binding domain C4J88_RS23125 PF13148 Protein of unknown function (DUF3987) C4J88_RS23200 PF06463 Molybdenum Cofactor Synthesis C C4J88_RS23200 PF04055 Radical SAM superfamily C4J88_RS23205 PF01062 Bestrophin, RFP-TM, chloride channel C4J88_RS23220 PF03350 Uncharacterized protein family, UPF0114 C4J88_RS23235 PF05362 Lon protease (S16) C-terminal proteolytic domain C4J88_RS23235 PF13654 AAA domain C4J88_RS23255 PF03449 Transcription elongation factor, N-terminal C4J88_RS23255 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J88_RS23260 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C4J88_RS23260 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C4J88_RS23275 PF00155 Aminotransferase class I and II C4J88_RS23290 PF07690 Major Facilitator Superfamily C4J88_RS23295 PF03466 LysR substrate binding domain C4J88_RS23295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS23300 PF00005 ABC transporter C4J88_RS23300 PF12848 ABC transporter C4J88_RS23310 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS23310 PF00563 EAL domain C4J88_RS23310 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS23315 PF00464 Serine hydroxymethyltransferase C4J88_RS23320 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J88_RS23320 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J88_RS23325 PF04328 Selenoprotein, putative C4J88_RS23330 PF02554 Carbon starvation protein CstA C4J88_RS23330 PF13722 5TM C-terminal transporter carbon starvation CstA C4J88_RS23335 PF18073 Rubredoxin metal binding domain C4J88_RS23345 PF06628 Catalase-related immune-responsive C4J88_RS23345 PF00199 Catalase C4J88_RS23350 PF01741 Large-conductance mechanosensitive channel, MscL C4J88_RS23355 PF00175 Oxidoreductase NAD-binding domain C4J88_RS23355 PF00970 Oxidoreductase FAD-binding domain C4J88_RS23360 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS23360 PF03472 Autoinducer binding domain C4J88_RS23365 PF05175 Methyltransferase small domain C4J88_RS23375 PF02322 Cytochrome bd terminal oxidase subunit II C4J88_RS23380 PF01654 Cytochrome bd terminal oxidase subunit I C4J88_RS23390 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C4J88_RS23390 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4J88_RS23395 PF00941 FAD binding domain in molybdopterin dehydrogenase C4J88_RS23395 PF03450 CO dehydrogenase flavoprotein C-terminal domain C4J88_RS23400 PF00111 2Fe-2S iron-sulfur cluster binding domain C4J88_RS23400 PF01799 [2Fe-2S] binding domain C4J88_RS23400 PF10518 TAT (twin-arginine translocation) pathway signal sequence C4J88_RS23410 PF00860 Permease family C4J88_RS23415 PF05958 tRNA (Uracil-5-)-methyltransferase C4J88_RS23430 PF01220 Dehydroquinase class II C4J88_RS23435 PF08501 Shikimate dehydrogenase substrate binding domain C4J88_RS23435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C4J88_RS23440 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS23440 PF17938 Tetracyclin repressor-like, C-terminal domain C4J88_RS23445 PF01261 Xylose isomerase-like TIM barrel C4J88_RS23445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4J88_RS23450 PF07690 Major Facilitator Superfamily C4J88_RS23465 PF04228 Putative neutral zinc metallopeptidase C4J88_RS23485 PF13302 Acetyltransferase (GNAT) domain C4J88_RS23490 PF00850 Histone deacetylase domain C4J88_RS23495 PF13247 4Fe-4S dicluster domain C4J88_RS23495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4J88_RS23495 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS23500 PF00270 DEAD/DEAH box helicase C4J88_RS23500 PF00271 Helicase conserved C-terminal domain C4J88_RS23505 PF00892 EamA-like transporter family C4J88_RS23520 PF04851 Type III restriction enzyme, res subunit C4J88_RS23520 PF00929 Exonuclease C4J88_RS23520 PF13307 Helicase C-terminal domain C4J88_RS23530 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) C4J88_RS23550 PF00270 DEAD/DEAH box helicase C4J88_RS23550 PF04408 Helicase associated domain (HA2) C4J88_RS23550 PF00271 Helicase conserved C-terminal domain C4J88_RS23550 PF08482 ATP-dependent helicase C-terminal C4J88_RS23565 PF01545 Cation efflux family C4J88_RS23565 PF16916 Dimerisation domain of Zinc Transporter C4J88_RS23575 PF01037 Lrp/AsnC ligand binding domain C4J88_RS23585 PF00849 RNA pseudouridylate synthase C4J88_RS23590 PF01048 Phosphorylase superfamily C4J88_RS23590 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus C4J88_RS23595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS23595 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS23595 PF18158 Adaptive response protein AidB N-terminal domain C4J88_RS23600 PF17149 Periplasmic sensor domain found in signal transduction proteins C4J88_RS23600 PF00672 HAMP domain C4J88_RS23600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS23600 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS23600 PF01627 Hpt domain C4J88_RS23600 PF00072 Response regulator receiver domain C4J88_RS23605 PF08543 Phosphomethylpyrimidine kinase C4J88_RS23610 PF02581 Thiamine monophosphate synthase C4J88_RS23615 PF00202 Aminotransferase class-III C4J88_RS23630 PF00919 Uncharacterized protein family UPF0004 C4J88_RS23630 PF04055 Radical SAM superfamily C4J88_RS23630 PF01938 TRAM domain C4J88_RS23635 PF02562 PhoH-like protein C4J88_RS23640 PF02130 Uncharacterized protein family UPF0054 C4J88_RS23645 PF03471 Transporter associated domain C4J88_RS23645 PF00571 CBS domain C4J88_RS23650 PF00795 Carbon-nitrogen hydrolase C4J88_RS23665 PF13603 Leucyl-tRNA synthetase, Domain 2 C4J88_RS23665 PF08264 Anticodon-binding domain of tRNA C4J88_RS23665 PF09334 tRNA synthetases class I (M) C4J88_RS23665 PF00133 tRNA synthetases class I (I, L, M and V) C4J88_RS23675 PF14840 Processivity clamp loader gamma complex DNA pol III C-term C4J88_RS23675 PF06144 DNA polymerase III, delta subunit C4J88_RS23685 PF13406 Transglycosylase SLT domain C4J88_RS23690 PF17676 LD-carboxypeptidase C-terminal domain C4J88_RS23690 PF02016 LD-carboxypeptidase N-terminal domain C4J88_RS23695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C4J88_RS23695 PF04055 Radical SAM superfamily C4J88_RS23700 PF03099 Biotin/lipoate A/B protein ligase family C4J88_RS23705 PF04359 Protein of unknown function (DUF493) C4J88_RS23710 PF00768 D-alanyl-D-alanine carboxypeptidase C4J88_RS23710 PF07943 Penicillin-binding protein 5, C-terminal domain C4J88_RS23715 PF03330 Lytic transglycolase C4J88_RS23715 PF05036 Sporulation related domain C4J88_RS23720 PF13406 Transglycosylase SLT domain C4J88_RS23725 PF01098 Cell cycle protein C4J88_RS23730 PF00905 Penicillin binding protein transpeptidase domain C4J88_RS23730 PF03717 Penicillin-binding Protein dimerisation domain C4J88_RS23735 PF02590 Predicted SPOUT methyltransferase C4J88_RS23745 PF01467 Cytidylyltransferase-like C4J88_RS23750 PF00171 Aldehyde dehydrogenase family C4J88_RS23755 PF02245 Methylpurine-DNA glycosylase (MPG) C4J88_RS23760 PF09335 SNARE associated Golgi protein C4J88_RS23775 PF04172 LrgB-like family C4J88_RS23780 PF03788 LrgA family C4J88_RS23785 PF01575 MaoC like domain C4J88_RS23795 PF13460 NAD(P)H-binding C4J88_RS23805 PF02441 Flavoprotein C4J88_RS23810 PF01225 Mur ligase family, catalytic domain C4J88_RS23810 PF02875 Mur ligase family, glutamate ligase domain C4J88_RS23810 PF08245 Mur ligase middle domain C4J88_RS23815 PF02954 Bacterial regulatory protein, Fis family C4J88_RS23815 PF01590 GAF domain C4J88_RS23815 PF00158 Sigma-54 interaction domain C4J88_RS23820 PF00171 Aldehyde dehydrogenase family C4J88_RS23825 PF13520 Amino acid permease C4J88_RS23830 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C4J88_RS23835 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C4J88_RS23840 PF00583 Acetyltransferase (GNAT) family C4J88_RS23845 PF09335 SNARE associated Golgi protein C4J88_RS23850 PF06167 Glucose-regulated metallo-peptidase M90 C4J88_RS23855 PF00719 Inorganic pyrophosphatase C4J88_RS23860 PF01381 Helix-turn-helix C4J88_RS23860 PF00717 Peptidase S24-like C4J88_RS23875 PF00857 Isochorismatase family C4J88_RS23880 PF06250 YhcG PDDEXK nuclease domain C4J88_RS23880 PF17761 DUF1016 N-terminal domain C4J88_RS23890 PF05593 RHS Repeat C4J88_RS23890 PF03527 RHS protein C4J88_RS23905 PF02609 Exonuclease VII small subunit C4J88_RS23910 PF00348 Polyprenyl synthetase C4J88_RS23915 PF02780 Transketolase, C-terminal domain C4J88_RS23915 PF02779 Transketolase, pyrimidine binding domain C4J88_RS23915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C4J88_RS23920 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS23920 PF00593 TonB dependent receptor C4J88_RS23925 PF01497 Periplasmic binding protein C4J88_RS23935 PF00925 GTP cyclohydrolase II C4J88_RS23945 PF00586 AIR synthase related protein, N-terminal domain C4J88_RS23945 PF02769 AIR synthase related protein, C-terminal domain C4J88_RS23950 PF01029 NusB family C4J88_RS23955 PF00885 6,7-dimethyl-8-ribityllumazine synthase C4J88_RS23960 PF00925 GTP cyclohydrolase II C4J88_RS23960 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C4J88_RS23965 PF00677 Lumazine binding domain C4J88_RS23970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C4J88_RS23970 PF01872 RibD C-terminal domain C4J88_RS23975 PF03477 ATP cone domain C4J88_RS23995 PF00085 Thioredoxin C4J88_RS24010 PF00005 ABC transporter C4J88_RS24035 PF00270 DEAD/DEAH box helicase C4J88_RS24035 PF08494 DEAD/H associated C4J88_RS24035 PF00271 Helicase conserved C-terminal domain C4J88_RS24040 PF00924 Mechanosensitive ion channel C4J88_RS24050 PF03372 Endonuclease/Exonuclease/phosphatase family C4J88_RS24055 PF13091 PLD-like domain C4J88_RS24060 PF03706 Lysylphosphatidylglycerol synthase TM region C4J88_RS24075 PF00857 Isochorismatase family C4J88_RS24085 PF00436 Single-strand binding protein family C4J88_RS24090 PF07690 Major Facilitator Superfamily C4J88_RS24095 PF17760 UvrA interaction domain C4J88_RS24095 PF17755 UvrA DNA-binding domain C4J88_RS24100 PF00210 Ferritin-like domain C4J88_RS24105 PF06628 Catalase-related immune-responsive C4J88_RS24105 PF00199 Catalase C4J88_RS24110 PF01196 Ribosomal protein L17 C4J88_RS24115 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C4J88_RS24115 PF01000 RNA polymerase Rpb3/RpoA insert domain C4J88_RS24115 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C4J88_RS24120 PF00163 Ribosomal protein S4/S9 N-terminal domain C4J88_RS24120 PF01479 S4 domain C4J88_RS24125 PF00411 Ribosomal protein S11 C4J88_RS24130 PF00416 Ribosomal protein S13/S18 C4J88_RS24135 PF00444 Ribosomal protein L36 C4J88_RS24140 PF00344 SecY translocase C4J88_RS24145 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C4J88_RS24150 PF00327 Ribosomal protein L30p/L7e C4J88_RS24155 PF00333 Ribosomal protein S5, N-terminal domain C4J88_RS24155 PF03719 Ribosomal protein S5, C-terminal domain C4J88_RS24160 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C4J88_RS24165 PF00347 Ribosomal protein L6 C4J88_RS24170 PF00410 Ribosomal protein S8 C4J88_RS24175 PF00253 Ribosomal protein S14p/S29e C4J88_RS24180 PF00673 ribosomal L5P family C-terminus C4J88_RS24180 PF00281 Ribosomal protein L5 C4J88_RS24185 PF00467 KOW motif C4J88_RS24185 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C4J88_RS24190 PF00238 Ribosomal protein L14p/L23e C4J88_RS24195 PF00366 Ribosomal protein S17 C4J88_RS24200 PF00831 Ribosomal L29 protein C4J88_RS24205 PF00252 Ribosomal protein L16p/L10e C4J88_RS24210 PF00189 Ribosomal protein S3, C-terminal domain C4J88_RS24210 PF07650 KH domain C4J88_RS24215 PF00237 Ribosomal protein L22p/L17e C4J88_RS24220 PF00203 Ribosomal protein S19 C4J88_RS24225 PF03947 Ribosomal Proteins L2, C-terminal domain C4J88_RS24225 PF00181 Ribosomal Proteins L2, RNA binding domain C4J88_RS24230 PF00276 Ribosomal protein L23 C4J88_RS24235 PF00573 Ribosomal protein L4/L1 family C4J88_RS24240 PF00297 Ribosomal protein L3 C4J88_RS24245 PF00338 Ribosomal protein S10p/S20e C4J88_RS24250 PF00009 Elongation factor Tu GTP binding domain C4J88_RS24250 PF03143 Elongation factor Tu C-terminal domain C4J88_RS24250 PF03144 Elongation factor Tu domain 2 C4J88_RS24255 PF03144 Elongation factor Tu domain 2 C4J88_RS24255 PF00679 Elongation factor G C-terminus C4J88_RS24255 PF14492 Elongation Factor G, domain II C4J88_RS24255 PF03764 Elongation factor G, domain IV C4J88_RS24255 PF00009 Elongation factor Tu GTP binding domain C4J88_RS24260 PF00177 Ribosomal protein S7p/S5e C4J88_RS24265 PF00164 Ribosomal protein S12/S23 C4J88_RS24270 PF05000 RNA polymerase Rpb1, domain 4 C4J88_RS24270 PF04998 RNA polymerase Rpb1, domain 5 C4J88_RS24270 PF00623 RNA polymerase Rpb1, domain 2 C4J88_RS24270 PF04983 RNA polymerase Rpb1, domain 3 C4J88_RS24270 PF04997 RNA polymerase Rpb1, domain 1 C4J88_RS24275 PF04563 RNA polymerase beta subunit C4J88_RS24275 PF04561 RNA polymerase Rpb2, domain 2 C4J88_RS24275 PF10385 RNA polymerase beta subunit external 1 domain C4J88_RS24275 PF04565 RNA polymerase Rpb2, domain 3 C4J88_RS24275 PF00562 RNA polymerase Rpb2, domain 6 C4J88_RS24275 PF04560 RNA polymerase Rpb2, domain 7 C4J88_RS24280 PF00542 Ribosomal protein L7/L12 C-terminal domain C4J88_RS24280 PF16320 Ribosomal protein L7/L12 dimerisation domain C4J88_RS24285 PF00466 Ribosomal protein L10 C4J88_RS24290 PF00687 Ribosomal protein L1p/L10e family C4J88_RS24295 PF03946 Ribosomal protein L11, N-terminal domain C4J88_RS24295 PF00298 Ribosomal protein L11, RNA binding domain C4J88_RS24300 PF00467 KOW motif C4J88_RS24300 PF02357 Transcription termination factor nusG C4J88_RS24305 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C4J88_RS24335 PF03309 Type III pantothenate kinase C4J88_RS24340 PF02237 Biotin protein ligase C terminal domain C4J88_RS24340 PF03099 Biotin/lipoate A/B protein ligase family C4J88_RS24340 PF08279 HTH domain C4J88_RS24375 PF01479 S4 domain C4J88_RS24375 PF00579 tRNA synthetases class I (W and Y) C4J88_RS24385 PF04225 Opacity-associated protein A LysM-like domain C4J88_RS24385 PF01551 Peptidase family M23 C4J88_RS24390 PF03702 Anhydro-N-acetylmuramic acid kinase C4J88_RS24395 PF01521 Iron-sulphur cluster biosynthesis C4J88_RS24400 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4J88_RS24400 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4J88_RS24405 PF03653 Uncharacterised protein family (UPF0093) C4J88_RS24420 PF00106 short chain dehydrogenase C4J88_RS24425 PF01230 HIT domain C4J88_RS24430 PF03232 Ubiquinone biosynthesis protein COQ7 C4J88_RS24435 PF02566 OsmC-like protein C4J88_RS24440 PF00027 Cyclic nucleotide-binding domain C4J88_RS24440 PF13545 Crp-like helix-turn-helix domain C4J88_RS24450 PF00218 Indole-3-glycerol phosphate synthase C4J88_RS24455 PF02885 Glycosyl transferase family, helical bundle domain C4J88_RS24455 PF00591 Glycosyl transferase family, a/b domain C4J88_RS24460 PF00117 Glutamine amidotransferase class-I C4J88_RS24465 PF00657 GDSL-like Lipase/Acylhydrolase C4J88_RS24465 PF03797 Autotransporter beta-domain C4J88_RS24470 PF04715 Anthranilate synthase component I, N terminal region C4J88_RS24470 PF00425 chorismate binding enzyme C4J88_RS24475 PF13419 Haloacid dehalogenase-like hydrolase C4J88_RS24480 PF00834 Ribulose-phosphate 3 epimerase family C4J88_RS24485 PF00465 Iron-containing alcohol dehydrogenase C4J88_RS24490 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS24495 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS24505 PF08402 TOBE domain C4J88_RS24505 PF00005 ABC transporter C4J88_RS24510 PF00196 Bacterial regulatory proteins, luxR family C4J88_RS24510 PF00072 Response regulator receiver domain C4J88_RS24515 PF05384 Sensor protein DegS C4J88_RS24515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS24515 PF07730 Histidine kinase C4J88_RS24525 PF05099 Tellurite resistance protein TerB C4J88_RS24525 PF00226 DnaJ domain C4J88_RS24530 PF00483 Nucleotidyl transferase C4J88_RS24535 PF01636 Phosphotransferase enzyme family C4J88_RS24540 PF04453 LPS transport system D C4J88_RS24540 PF03968 OstA-like protein C4J88_RS24545 PF00639 PPIC-type PPIASE domain C4J88_RS24545 PF09312 SurA N-terminal domain C4J88_RS24550 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C4J88_RS24555 PF00398 Ribosomal RNA adenine dimethylase C4J88_RS24560 PF04379 ApaG domain C4J88_RS24565 PF00149 Calcineurin-like phosphoesterase C4J88_RS24570 PF00581 Rhodanese-like domain C4J88_RS24575 PF06798 PrkA serine protein kinase C-terminal domain C4J88_RS24575 PF08298 PrkA AAA domain C4J88_RS24580 PF04285 Protein of unknown function (DUF444) C4J88_RS24585 PF04293 SpoVR like protein C4J88_RS24590 PF01966 HD domain C4J88_RS24590 PF12627 Probable RNA and SrmB- binding site of polymerase A C4J88_RS24590 PF01743 Poly A polymerase head domain C4J88_RS24600 PF02152 Dihydroneopterin aldolase C4J88_RS24605 PF02660 Glycerol-3-phosphate acyltransferase C4J88_RS24610 PF00814 Glycoprotease family C4J88_RS24615 PF01165 Ribosomal protein S21 C4J88_RS24620 PF08278 DNA primase DnaG DnaB-binding C4J88_RS24620 PF01807 CHC2 zinc finger C4J88_RS24620 PF08275 DNA primase catalytic core, N-terminal domain C4J88_RS24620 PF13662 Toprim domain C4J88_RS24620 PF10410 DnaB-helicase binding domain of primase C4J88_RS24625 PF04546 Sigma-70, non-essential region C4J88_RS24625 PF03979 Sigma-70 factor, region 1.1 C4J88_RS24625 PF04545 Sigma-70, region 4 C4J88_RS24625 PF04542 Sigma-70 region 2 C4J88_RS24625 PF04539 Sigma-70 region 3 C4J88_RS24625 PF00140 Sigma-70 factor, region 1.2 C4J88_RS24630 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS24630 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS24630 PF00563 EAL domain C4J88_RS24695 PF01593 Flavin containing amine oxidoreductase C4J88_RS24700 PF00795 Carbon-nitrogen hydrolase C4J88_RS24705 PF00675 Insulinase (Peptidase family M16) C4J88_RS24705 PF05193 Peptidase M16 inactive domain C4J88_RS24710 PF08042 PqqA family C4J88_RS24715 PF12706 Beta-lactamase superfamily domain C4J88_RS24720 PF03070 TENA/THI-4/PQQC family C4J88_RS24725 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C4J88_RS24730 PF04055 Radical SAM superfamily C4J88_RS24730 PF13186 Iron-sulfur cluster-binding domain C4J88_RS24735 PF01679 Proteolipid membrane potential modulator C4J88_RS24740 PF00202 Aminotransferase class-III C4J88_RS24745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS24745 PF03466 LysR substrate binding domain C4J88_RS24750 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS24750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS24750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS24750 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J88_RS24755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS24755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS24755 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS24755 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J88_RS24760 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS24765 PF02770 Acyl-CoA dehydrogenase, middle domain C4J88_RS24765 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4J88_RS24765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4J88_RS24765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4J88_RS24780 PF08241 Methyltransferase domain C4J88_RS24785 PF08241 Methyltransferase domain C4J88_RS24785 PF12697 Alpha/beta hydrolase family C4J88_RS24790 PF00155 Aminotransferase class I and II C4J88_RS24795 PF04055 Radical SAM superfamily C4J88_RS24795 PF06968 Biotin and Thiamin Synthesis associated domain C4J88_RS24800 PF00156 Phosphoribosyl transferase domain C4J88_RS24805 PF03459 TOBE domain C4J88_RS24805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS24815 PF01636 Phosphotransferase enzyme family C4J88_RS24820 PF00892 EamA-like transporter family C4J88_RS24830 PF01274 Malate synthase C4J88_RS24835 PF00072 Response regulator receiver domain C4J88_RS24845 PF00929 Exonuclease C4J88_RS24850 PF08281 Sigma-70, region 4 C4J88_RS24850 PF04542 Sigma-70 region 2 C4J88_RS24860 PF00593 TonB dependent receptor C4J88_RS24860 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS24885 PF06123 Inner membrane protein CreD C4J88_RS24890 PF00672 HAMP domain C4J88_RS24890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS24890 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS24895 PF00072 Response regulator receiver domain C4J88_RS24895 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS24900 PF18030 RimK PreATP-grasp domain C4J88_RS24900 PF08443 RimK-like ATP-grasp domain C4J88_RS24905 PF01553 Acyltransferase C4J88_RS24920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C4J88_RS24920 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS24925 PF00551 Formyl transferase C4J88_RS24935 PF17806 Sarcosine oxidase A3 domain C4J88_RS24935 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS24935 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4J88_RS24935 PF01571 Aminomethyltransferase folate-binding domain C4J88_RS24940 PF04267 Sarcosine oxidase, delta subunit family C4J88_RS24945 PF01266 FAD dependent oxidoreductase C4J88_RS24950 PF00464 Serine hydroxymethyltransferase C4J88_RS24960 PF01212 Beta-eliminating lyase C4J88_RS24975 PF00042 Globin C4J88_RS24975 PF00970 Oxidoreductase FAD-binding domain C4J88_RS24975 PF00175 Oxidoreductase NAD-binding domain C4J88_RS24980 PF00355 Rieske [2Fe-2S] domain C4J88_RS24980 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4J88_RS24990 PF00766 Electron transfer flavoprotein FAD-binding domain C4J88_RS24990 PF01012 Electron transfer flavoprotein domain C4J88_RS24995 PF13183 4Fe-4S dicluster domain C4J88_RS24995 PF02754 Cysteine-rich domain C4J88_RS25000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4J88_RS25025 PF12833 Helix-turn-helix domain C4J88_RS25025 PF01965 DJ-1/PfpI family C4J88_RS25035 PF05853 beta-keto acid cleavage enzyme C4J88_RS25040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4J88_RS25040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4J88_RS25060 PF01965 DJ-1/PfpI family C4J88_RS25060 PF12833 Helix-turn-helix domain C4J88_RS25065 PF01208 Uroporphyrinogen decarboxylase (URO-D) C4J88_RS25070 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4J88_RS25070 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS25075 PF01493 GXGXG motif C4J88_RS25075 PF01645 Conserved region in glutamate synthase C4J88_RS25075 PF00310 Glutamine amidotransferases class-II C4J88_RS25075 PF04898 Glutamate synthase central domain C4J88_RS25090 PF01761 3-dehydroquinate synthase C4J88_RS25095 PF01202 Shikimate kinase C4J88_RS25100 PF11741 AMIN domain C4J88_RS25100 PF00263 Bacterial type II and III secretion system protein C4J88_RS25100 PF03958 Bacterial type II/III secretion system short domain C4J88_RS25100 PF07660 Secretin and TonB N terminus short domain C4J88_RS25105 PF04350 Pilus assembly protein, PilO C4J88_RS25115 PF11104 Type IV pilus assembly protein PilM; C4J88_RS25120 PF00912 Transglycosylase C4J88_RS25120 PF00905 Penicillin binding protein transpeptidase domain C4J88_RS25120 PF17092 Penicillin-binding protein OB-like domain C4J88_RS25125 PF03949 Malic enzyme, NAD binding domain C4J88_RS25125 PF00390 Malic enzyme, N-terminal domain C4J88_RS25135 PF01197 Ribosomal protein L31 C4J88_RS25140 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C4J88_RS25140 PF00270 DEAD/DEAH box helicase C4J88_RS25140 PF17764 3′ DNA-binding domain (3′BD) C4J88_RS25140 PF00271 Helicase conserved C-terminal domain C4J88_RS25140 PF18074 Primosomal protein N C-terminal domain C4J88_RS25145 PF05746 DALR anticodon binding domain C4J88_RS25145 PF00750 tRNA synthetases class I (R) C4J88_RS25145 PF03485 Arginyl tRNA synthetase N terminal domain C4J88_RS25155 PF00227 Proteasome subunit C4J88_RS25160 PF07724 AAA domain (Cdc48 subfamily) C4J88_RS25160 PF00004 ATPase family associated with various cellular activities (AAA) C4J88_RS25170 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C4J88_RS25175 PF00561 alpha/beta hydrolase fold C4J88_RS25180 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C4J88_RS25205 PF01209 ubiE/COQ5 methyltransferase family C4J88_RS25215 PF03109 ABC1 family C4J88_RS25220 PF01502 Phosphoribosyl-AMP cyclohydrolase C4J88_RS25225 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C4J88_RS25230 PF02416 mttA/Hcf106 family C4J88_RS25235 PF02416 mttA/Hcf106 family C4J88_RS25240 PF00902 Sec-independent protein translocase protein (TatC) C4J88_RS25255 PF00999 Sodium/hydrogen exchanger family C4J88_RS25260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS25260 PF03466 LysR substrate binding domain C4J88_RS25275 PF01226 Formate/nitrite transporter C4J88_RS25285 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C4J88_RS25285 PF05221 S-adenosyl-L-homocysteine hydrolase C4J88_RS25290 PF02219 Methylenetetrahydrofolate reductase C4J88_RS25305 PF00271 Helicase conserved C-terminal domain C4J88_RS25305 PF00270 DEAD/DEAH box helicase C4J88_RS25310 PF04264 YceI-like domain C4J88_RS25315 PF01292 Prokaryotic cytochrome b561 C4J88_RS25320 PF00202 Aminotransferase class-III C4J88_RS25325 PF04452 RNA methyltransferase C4J88_RS25330 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS25340 PF01266 FAD dependent oxidoreductase C4J88_RS25345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS25345 PF03466 LysR substrate binding domain C4J88_RS25350 PF03006 Haemolysin-III related C4J88_RS25355 PF03466 LysR substrate binding domain C4J88_RS25355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS25375 PF00698 Acyl transferase domain C4J88_RS25380 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG C4J88_RS25390 PF01039 Carboxyl transferase domain C4J88_RS25395 PF06857 Malonate decarboxylase delta subunit (MdcD) C4J88_RS25400 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C4J88_RS25405 PF16957 Malonate decarboxylase, alpha subunit, transporter C4J88_RS25430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS25430 PF01627 Hpt domain C4J88_RS25430 PF00072 Response regulator receiver domain C4J88_RS25430 PF02895 Signal transducing histidine kinase, homodimeric domain C4J88_RS25430 PF01584 CheW-like domain C4J88_RS25435 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C4J88_RS25435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS25440 PF01584 CheW-like domain C4J88_RS25445 PF00072 Response regulator receiver domain C4J88_RS25450 PF00072 Response regulator receiver domain C4J88_RS25455 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C4J88_RS25455 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C4J88_RS25470 PF02622 Uncharacterized ACR, COG1678 C4J88_RS25475 PF03652 Holliday junction resolvase C4J88_RS25480 PF00156 Phosphoribosyl transferase domain C4J88_RS25485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4J88_RS25485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4J88_RS25490 PF01979 Amidohydrolase family C4J88_RS25500 PF00877 NlpC/P60 family C4J88_RS25505 PF00437 Type II/IV secretion system protein C4J88_RS25510 PF01168 Alanine racemase, N-terminal domain C4J88_RS25515 PF03807 NADP oxidoreductase coenzyme F420-dependent C4J88_RS25515 PF14748 Pyrroline-5-carboxylate reductase dimerisation C4J88_RS25520 PF02325 YGGT family C4J88_RS25525 PF00561 alpha/beta hydrolase fold C4J88_RS25530 PF00561 alpha/beta hydrolase fold C4J88_RS25530 PF07021 Methionine biosynthesis protein MetW C4J88_RS25540 PF01725 Ham1 family C4J88_RS25545 PF04055 Radical SAM superfamily C4J88_RS25545 PF06969 HemN C-terminal domain C4J88_RS25555 PF02390 Putative methyltransferase C4J88_RS25560 PF05690 Thiazole biosynthesis protein ThiG C4J88_RS25565 PF05690 Thiazole biosynthesis protein ThiG C4J88_RS25565 PF02597 ThiS family C4J88_RS25570 PF04241 Protein of unknown function (DUF423) C4J88_RS25575 PF00912 Transglycosylase C4J88_RS25580 PF04545 Sigma-70, region 4 C4J88_RS25580 PF04542 Sigma-70 region 2 C4J88_RS25580 PF00140 Sigma-70 factor, region 1.2 C4J88_RS25585 PF18075 FtsX extracellular domain C4J88_RS25590 PF00005 ABC transporter C4J88_RS25595 PF02881 SRP54-type protein, helical bundle domain C4J88_RS25595 PF00448 SRP54-type protein, GTPase domain C4J88_RS25600 PF00675 Insulinase (Peptidase family M16) C4J88_RS25600 PF05193 Peptidase M16 inactive domain C4J88_RS25605 PF05193 Peptidase M16 inactive domain C4J88_RS25615 PF00561 alpha/beta hydrolase fold C4J88_RS25625 PF00581 Rhodanese-like domain C4J88_RS25630 PF00440 Bacterial regulatory proteins, tetR family C4J88_RS25635 PF00171 Aldehyde dehydrogenase family C4J88_RS25645 PF00732 GMC oxidoreductase C4J88_RS25645 PF05199 GMC oxidoreductase C4J88_RS25650 PF01467 Cytidylyltransferase-like C4J88_RS25655 PF00037 4Fe-4S binding domain C4J88_RS25660 PF06827 Zinc finger found in FPG and IleRS C4J88_RS25660 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C4J88_RS25660 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C4J88_RS25670 PF10672 S-adenosylmethionine-dependent methyltransferase C4J88_RS25670 PF17785 PUA-like domain C4J88_RS25675 PF07690 Major Facilitator Superfamily C4J88_RS25685 PF00920 Dehydratase family C4J88_RS25695 PF00375 Sodium:dicarboxylate symporter family C4J88_RS25700 PF00186 Dihydrofolate reductase C4J88_RS25710 PF01926 50S ribosome-binding GTPase C4J88_RS25710 PF12631 MnmE helical domain C4J88_RS25710 PF10396 GTP-binding protein TrmE N-terminus C4J88_RS25715 PF01266 FAD dependent oxidoreductase C4J88_RS25715 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C4J88_RS25725 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS25730 PF08402 TOBE domain C4J88_RS25730 PF00005 ABC transporter C4J88_RS25740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS25740 PF03466 LysR substrate binding domain C4J88_RS25745 PF00403 Heavy-metal-associated domain C4J88_RS25750 PF13411 MerR HTH family regulatory protein C4J88_RS25755 PF00303 Thymidylate synthase C4J88_RS25760 PF01790 Prolipoprotein diacylglyceryl transferase C4J88_RS25770 PF02896 PEP-utilising enzyme, TIM barrel domain C4J88_RS25770 PF00391 PEP-utilising enzyme, mobile domain C4J88_RS25770 PF05524 PEP-utilising enzyme, N-terminal C4J88_RS25770 PF01590 GAF domain C4J88_RS25775 PF00293 NUDIX domain C4J88_RS25790 PF11066 Protein of unknown function (DUF2867) C4J88_RS25790 PF13460 NAD(P)H-binding C4J88_RS25800 PF00291 Pyridoxal-phosphate dependent enzyme C4J88_RS25800 PF00585 C-terminal regulatory domain of Threonine dehydratase C4J88_RS25805 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C4J88_RS25810 PF04389 Peptidase family M28 C4J88_RS25815 PF06977 SdiA-regulated C4J88_RS25820 PF06977 SdiA-regulated C4J88_RS25825 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4J88_RS25830 PF02913 FAD linked oxidases, C-terminal domain C4J88_RS25830 PF01565 FAD binding domain C4J88_RS25840 PF01842 ACT domain C4J88_RS25840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4J88_RS25840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4J88_RS25850 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS25875 PF01804 Penicillin amidase C4J88_RS25880 PF12833 Helix-turn-helix domain C4J88_RS25880 PF01965 DJ-1/PfpI family C4J88_RS25895 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS25900 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS25905 PF08402 TOBE domain C4J88_RS25905 PF00005 ABC transporter C4J88_RS25910 PF13416 Bacterial extracellular solute-binding protein C4J88_RS25920 PF13416 Bacterial extracellular solute-binding protein C4J88_RS25925 PF00202 Aminotransferase class-III C4J88_RS25930 PF00120 Glutamine synthetase, catalytic domain C4J88_RS25935 PF00120 Glutamine synthetase, catalytic domain C4J88_RS25945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS25945 PF03459 TOBE domain C4J88_RS25950 PF00005 ABC transporter C4J88_RS25955 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS25960 PF00296 Luciferase-like monooxygenase C4J88_RS25965 PF09084 NMT1/THI5 like C4J88_RS25970 PF03358 NADPH-dependent FMN reductase C4J88_RS25975 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4J88_RS25975 PF00578 AhpC/TSA family C4J88_RS25980 PF03573 outer membrane porin, OprD family C4J88_RS25985 PF00583 Acetyltransferase (GNAT) family C4J88_RS25985 PF00696 Amino acid kinase family C4J88_RS25990 PF07687 Peptidase dimerisation domain C4J88_RS25990 PF01546 Peptidase family M20/M25/M40 C4J88_RS26000 PF01037 Lrp/AsnC ligand binding domain C4J88_RS26000 PF13404 AsnC-type helix-turn-helix domain C4J88_RS26010 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C4J88_RS26010 PF00437 Type II/IV secretion system protein C4J88_RS26015 PF16200 C-terminal region of band_7 C4J88_RS26015 PF01145 SPFH domain / Band 7 family C4J88_RS26030 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C4J88_RS26035 PF01597 Glycine cleavage H-protein C4J88_RS26040 PF01571 Aminomethyltransferase folate-binding domain C4J88_RS26040 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4J88_RS26045 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS26055 PF01494 FAD binding domain C4J88_RS26060 PF01494 FAD binding domain C4J88_RS26065 PF00557 Metallopeptidase family M24 C4J88_RS26065 PF05195 Aminopeptidase P, N-terminal domain C4J88_RS26070 PF03695 Uncharacterised protein family (UPF0149) C4J88_RS26080 PF05164 Cell division protein ZapA C4J88_RS26090 PF01812 5-formyltetrahydrofolate cyclo-ligase family C4J88_RS26110 PF00698 Acyl transferase domain C4J88_RS26110 PF08240 Alcohol dehydrogenase GroES-like domain C4J88_RS26110 PF08990 Erythronolide synthase docking C4J88_RS26110 PF16197 Ketoacyl-synthetase C-terminal extension C4J88_RS26110 PF00109 Beta-ketoacyl synthase, N-terminal domain C4J88_RS26110 PF02801 Beta-ketoacyl synthase, C-terminal domain C4J88_RS26110 PF00550 Phosphopantetheine attachment site C4J88_RS26110 PF14765 Polyketide synthase dehydratase C4J88_RS26110 PF08659 KR domain C4J88_RS26115 PF07690 Major Facilitator Superfamily C4J88_RS26125 PF00175 Oxidoreductase NAD-binding domain C4J88_RS26130 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C4J88_RS26135 PF01757 Acyltransferase family C4J88_RS26140 PF07498 Rho termination factor, N-terminal domain C4J88_RS26140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J88_RS26140 PF07497 Rho termination factor, RNA-binding domain C4J88_RS26145 PF00085 Thioredoxin C4J88_RS26150 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS26150 PF07729 FCD domain C4J88_RS26155 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS26160 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS26165 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS26170 PF00005 ABC transporter C4J88_RS26180 PF13953 PapC C-terminal domain C4J88_RS26180 PF13954 PapC N-terminal domain C4J88_RS26180 PF00577 Outer membrane usher protein C4J88_RS26185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4J88_RS26195 PF02541 Ppx/GppA phosphatase family C4J88_RS26200 PF02503 Polyphosphate kinase middle domain C4J88_RS26200 PF13090 Polyphosphate kinase C-terminal domain 2 C4J88_RS26200 PF17941 Polyphosphate kinase C-terminal domain 1 C4J88_RS26200 PF13089 Polyphosphate kinase N-terminal domain C4J88_RS26210 PF09335 SNARE associated Golgi protein C4J88_RS26215 PF04116 Fatty acid hydroxylase superfamily C4J88_RS26225 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C4J88_RS26230 PF03239 Iron permease FTR1 family C4J88_RS26235 PF01810 LysE type translocator C4J88_RS26245 PF12848 ABC transporter C4J88_RS26245 PF00005 ABC transporter C4J88_RS26260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4J88_RS26260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4J88_RS26265 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C4J88_RS26270 PF02600 Disulfide bond formation protein DsbB C4J88_RS26285 PF03900 Porphobilinogen deaminase, C-terminal domain C4J88_RS26285 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C4J88_RS26290 PF00072 Response regulator receiver domain C4J88_RS26290 PF04397 LytTr DNA-binding domain C4J88_RS26295 PF00206 Lyase C4J88_RS26295 PF14698 Argininosuccinate lyase C-terminal C4J88_RS26300 PF14497 Glutathione S-transferase, C-terminal domain C4J88_RS26300 PF13417 Glutathione S-transferase, N-terminal domain C4J88_RS26315 PF12633 Adenylate cyclase NT domain C4J88_RS26315 PF01295 Adenylate cyclase, class-I C4J88_RS26320 PF01272 Transcription elongation factor, GreA/GreB, C-term C4J88_RS26320 PF14760 Rnk N-terminus C4J88_RS26330 PF01491 Frataxin-like domain C4J88_RS26335 PF13627 Prokaryotic lipoprotein-attachment site C4J88_RS26340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4J88_RS26340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4J88_RS26345 PF01678 Diaminopimelate epimerase C4J88_RS26355 PF00589 Phage integrase family C4J88_RS26355 PF02899 Phage integrase, N-terminal SAM-like domain C4J88_RS26360 PF13419 Haloacid dehalogenase-like hydrolase C4J88_RS26370 PF01894 Uncharacterised protein family UPF0047 C4J88_RS26375 PF00909 Ammonium Transporter Family C4J88_RS26380 PF00543 Nitrogen regulatory protein P-II C4J88_RS26385 PF04380 Membrane fusogenic activity C4J88_RS26390 PF13335 Magnesium chelatase, subunit ChlI C-terminal C4J88_RS26390 PF01078 Magnesium chelatase, subunit ChlI C4J88_RS26395 PF00672 HAMP domain C4J88_RS26395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4J88_RS26400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS26400 PF03466 LysR substrate binding domain C4J88_RS26405 PF01554 MatE C4J88_RS26410 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS26410 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS26410 PF00563 EAL domain C4J88_RS26415 PF00580 UvrD/REP helicase N-terminal domain C4J88_RS26415 PF13361 UvrD-like helicase C-terminal domain C4J88_RS26425 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C4J88_RS26425 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C4J88_RS26430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4J88_RS26440 PF00842 Alanine racemase, C-terminal domain C4J88_RS26440 PF01168 Alanine racemase, N-terminal domain C4J88_RS26445 PF01042 Endoribonuclease L-PSP C4J88_RS26450 PF01266 FAD dependent oxidoreductase C4J88_RS26455 PF01037 Lrp/AsnC ligand binding domain C4J88_RS26465 PF01266 FAD dependent oxidoreductase C4J88_RS26475 PF00155 Aminotransferase class I and II C4J88_RS26475 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS26480 PF13091 PLD-like domain C4J88_RS26490 PF00171 Aldehyde dehydrogenase family C4J88_RS26500 PF00471 Ribosomal protein L33 C4J88_RS26505 PF00830 Ribosomal L28 family C4J88_RS26510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4J88_RS26515 PF04002 RadC-like JAB domain C4J88_RS26520 PF02441 Flavoprotein C4J88_RS26520 PF04127 DNA / pantothenate metabolism flavoprotein C4J88_RS26525 PF00692 dUTPase C4J88_RS26535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4J88_RS26535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4J88_RS26535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4J88_RS26535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4J88_RS26540 PF00696 Amino acid kinase family C4J88_RS26545 PF00156 Phosphoribosyl transferase domain C4J88_RS26550 PF03372 Endonuclease/Exonuclease/phosphatase family C4J88_RS26560 PF01138 3' exoribonuclease family, domain 1 C4J88_RS26560 PF03725 3' exoribonuclease family, domain 2 C4J88_RS26565 PF08340 Domain of unknown function (DUF1732) C4J88_RS26565 PF03755 YicC-like family, N-terminal region C4J88_RS26570 PF00625 Guanylate kinase C4J88_RS26575 PF01192 RNA polymerase Rpb6 C4J88_RS26580 PF13291 ACT domain C4J88_RS26580 PF04607 Region found in RelA / SpoT proteins C4J88_RS26580 PF02824 TGS domain C4J88_RS26585 PF01042 Endoribonuclease L-PSP C4J88_RS26600 PF01618 MotA/TolQ/ExbB proton channel family C4J88_RS26605 PF02472 Biopolymer transport protein ExbD/TolR C4J88_RS26610 PF03544 Gram-negative bacterial TonB protein C-terminal C4J88_RS26615 PF03466 LysR substrate binding domain C4J88_RS26615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS26620 PF17191 RecG wedge domain C4J88_RS26620 PF00271 Helicase conserved C-terminal domain C4J88_RS26620 PF00270 DEAD/DEAH box helicase C4J88_RS26650 PF03781 Sulfatase-modifying factor enzyme 1 C4J88_RS26660 PF00005 ABC transporter C4J88_RS26665 PF03793 PASTA domain C4J88_RS26665 PF00069 Protein kinase domain C4J88_RS26680 PF06744 Type VI secretion protein IcmF C-terminal C4J88_RS26680 PF14331 ImcF-related N-terminal domain C4J88_RS26680 PF06761 Intracellular multiplication and human macrophage-killing C4J88_RS26685 PF00691 OmpA family C4J88_RS26685 PF13677 Membrane MotB of proton-channel complex MotA/MotB C4J88_RS26690 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE C4J88_RS26705 PF06812 ImpA, N-terminal, type VI secretion system C4J88_RS26710 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 C4J88_RS26715 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath C4J88_RS26720 PF05638 Type VI secretion system effector, Hcp C4J88_RS26725 PF04965 Gene 25-like lysozyme C4J88_RS26730 PF05947 Type VI secretion system, TssF C4J88_RS26745 PF04717 Type VI secretion system, phage-baseplate injector C4J88_RS26775 PF00216 Bacterial DNA-binding protein C4J88_RS26780 PF18113 Rubredoxin binding C-terminal domain C4J88_RS26780 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4J88_RS26785 PF00301 Rubredoxin C4J88_RS26790 PF04345 Chorismate lyase C4J88_RS26795 PF01040 UbiA prenyltransferase family C4J88_RS26805 PF00072 Response regulator receiver domain C4J88_RS26805 PF00486 Transcriptional regulatory protein, C terminal C4J88_RS26810 PF00512 His Kinase A (phospho-acceptor) domain C4J88_RS26810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4J88_RS26810 PF00989 PAS fold C4J88_RS26810 PF11808 Phosphate regulon sensor protein PhoR C4J88_RS26815 PF00571 CBS domain C4J88_RS26815 PF03471 Transporter associated domain C4J88_RS26815 PF01595 Cyclin M transmembrane N-terminal domain C4J88_RS26820 PF00072 Response regulator receiver domain C4J88_RS26825 PF01895 PhoU domain C4J88_RS26830 PF00005 ABC transporter C4J88_RS26835 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS26840 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS26845 PF12849 PBP superfamily domain C4J88_RS26860 PF07690 Major Facilitator Superfamily C4J88_RS26865 PF03061 Thioesterase superfamily C4J88_RS26885 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C4J88_RS26885 PF02222 ATP-grasp domain C4J88_RS26890 PF00731 AIR carboxylase C4J88_RS26895 PF03466 LysR substrate binding domain C4J88_RS26895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS26900 PF10415 Fumarase C C-terminus C4J88_RS26900 PF00206 Lyase C4J88_RS26905 PF01235 Sodium:alanine symporter family C4J88_RS26910 PF17763 Glutaminase/Asparaginase C-terminal domain C4J88_RS26910 PF00710 Asparaginase, N-terminal C4J88_RS26925 PF00155 Aminotransferase class I and II C4J88_RS26925 PF00392 Bacterial regulatory proteins, gntR family C4J88_RS26950 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4J88_RS26955 PF00528 Binding-protein-dependent transport system inner membrane component C4J88_RS26970 PF02436 Conserved carboxylase domain C4J88_RS26970 PF00682 HMGL-like C4J88_RS26970 PF00364 Biotin-requiring enzyme C4J88_RS26975 PF00289 Biotin carboxylase, N-terminal domain C4J88_RS26975 PF02785 Biotin carboxylase C-terminal domain C4J88_RS26975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4J88_RS26980 PF03466 LysR substrate binding domain C4J88_RS26980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS26995 PF01418 Helix-turn-helix domain, rpiR family C4J88_RS26995 PF01380 SIS domain C4J88_RS27000 PF00563 EAL domain C4J88_RS27000 PF03707 Bacterial signalling protein N terminal repeat C4J88_RS27000 PF00990 Diguanylate cyclase, GGDEF domain C4J88_RS27000 PF13188 PAS domain C4J88_RS27005 PF00580 UvrD/REP helicase N-terminal domain C4J88_RS27005 PF13361 UvrD-like helicase C-terminal domain C4J88_RS27025 PF02254 TrkA-N domain C4J88_RS27025 PF00999 Sodium/hydrogen exchanger family C4J88_RS27030 PF03061 Thioesterase superfamily C4J88_RS27035 PF08543 Phosphomethylpyrimidine kinase C4J88_RS27045 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J88_RS27045 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J88_RS27055 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4J88_RS27055 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4J88_RS27065 PF11741 AMIN domain C4J88_RS27065 PF01520 N-acetylmuramoyl-L-alanine amidase C4J88_RS27070 PF02649 Type I GTP cyclohydrolase folE2 C4J88_RS27075 PF00005 ABC transporter C4J88_RS27080 PF00950 ABC 3 transport family C4J88_RS27085 PF01297 Zinc-uptake complex component A periplasmic C4J88_RS27095 PF01979 Amidohydrolase family C4J88_RS27100 PF12276 Protein of unknown function (DUF3617) C4J88_RS27105 PF13091 PLD-like domain C4J88_RS27105 PF13396 Phospholipase_D-nuclease N-terminal C4J88_RS27120 PF05114 Protein of unknown function (DUF692) C4J88_RS27130 PF00403 Heavy-metal-associated domain C4J88_RS27150 PF01066 CDP-alcohol phosphatidyltransferase C4J88_RS27155 PF12146 Serine aminopeptidase, S33 C4J88_RS27155 PF12147 Putative methyltransferase C4J88_RS27160 PF00782 Dual specificity phosphatase, catalytic domain C4J88_RS27180 PF00561 alpha/beta hydrolase fold C4J88_RS27185 PF03466 LysR substrate binding domain C4J88_RS27185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4J88_RS27190 PF00694 Aconitase C-terminal domain C4J88_RS27195 PF00330 Aconitase family (aconitate hydratase) C4J88_RS27205 PF01380 SIS domain C4J88_RS27210 PF08220 DeoR-like helix-turn-helix domain C4J88_RS27210 PF00455 DeoR C terminal sensor domain C4J88_RS27215 PF00132 Bacterial transferase hexapeptide (six repeats) C4J88_RS27215 PF12804 MobA-like NTP transferase domain C4J88_RS27225 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C4J88_RS27225 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C4J88_RS27230 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J88_RS27230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J88_RS27235 PF00231 ATP synthase C4J88_RS27240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4J88_RS27240 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4J88_RS27240 PF00306 ATP synthase alpha/beta chain, C terminal domain C4J88_RS27245 PF00213 ATP synthase delta (OSCP) subunit C4J88_RS27250 PF00430 ATP synthase B/B' CF(0) C4J88_RS27255 PF00137 ATP synthase subunit C C4J88_RS27260 PF00119 ATP synthase A chain C4J88_RS27265 PF03899 ATP synthase I chain C4J88_RS27270 PF02195 ParB-like nuclease domain C4J88_RS27270 PF17762 HTH domain found in ParB protein C4J88_RS27275 PF13614 AAA domain C4J88_RS27280 PF02527 rRNA small subunit methyltransferase G C4J88_RS27285 PF13932 GidA associated domain C4J88_RS27285 PF01134 Glucose inhibited division protein A C4J88_RS27290 PF08281 Sigma-70, region 4 C4J88_RS27290 PF04542 Sigma-70 region 2 C4J88_RS27300 PF07715 TonB-dependent Receptor Plug Domain C4J88_RS27300 PF00593 TonB dependent receptor C4J88_RS27305 PF10396 GTP-binding protein TrmE N-terminus C4J88_RS27305 PF01926 50S ribosome-binding GTPase C4J88_RS27305 PF12631 MnmE helical domain C4J88_RS27310 PF14849 YidC periplasmic domain C4J88_RS27310 PF02096 60Kd inner membrane protein C4J88_RS27315 PF01809 Putative membrane protein insertion efficiency factor C4J88_RS27320 PF00825 Ribonuclease P C4J88_RS27325 PF00468 Ribosomal protein L34