locus-tag class description CXB48_RS00005 PF11638 DnaA N-terminal domain CXB48_RS00005 PF00308 Bacterial dnaA protein CXB48_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CXB48_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CXB48_RS00010 PF02767 DNA polymerase III beta subunit, central domain CXB48_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CXB48_RS00015 PF02463 RecF/RecN/SMC N terminal domain CXB48_RS00020 PF00204 DNA gyrase B CXB48_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus CXB48_RS00020 PF18053 DNA gyrase B subunit insert domain CXB48_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS00020 PF01751 Toprim domain CXB48_RS00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS00025 PF13192 Thioredoxin domain CXB48_RS00030 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit CXB48_RS00045 PF05746 DALR anticodon binding domain CXB48_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit CXB48_RS00055 PF03352 Methyladenine glycosylase CXB48_RS00075 PF00005 ABC transporter CXB48_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS00085 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS00090 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXB48_RS00095 PF02080 TrkA-C domain CXB48_RS00095 PF02254 TrkA-N domain CXB48_RS00100 PF01189 16S rRNA methyltransferase RsmB/F CXB48_RS00100 PF01029 NusB family CXB48_RS00105 PF00551 Formyl transferase CXB48_RS00105 PF02911 Formyl transferase, C-terminal domain CXB48_RS00110 PF01327 Polypeptide deformylase CXB48_RS00120 PF17782 DprA winged helix domain CXB48_RS00120 PF02481 DNA recombination-mediator protein A CXB48_RS00125 PF01300 Telomere recombination CXB48_RS00130 PF00107 Zinc-binding dehydrogenase CXB48_RS00130 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS00135 PF01218 Coproporphyrinogen III oxidase CXB48_RS00140 PF08501 Shikimate dehydrogenase substrate binding domain CXB48_RS00140 PF01488 Shikimate / quinate 5-dehydrogenase CXB48_RS00140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CXB48_RS00155 PF00768 D-alanyl-D-alanine carboxypeptidase CXB48_RS00190 PF03180 NLPA lipoprotein CXB48_RS00195 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS00200 PF09383 NIL domain CXB48_RS00200 PF00005 ABC transporter CXB48_RS00205 PF06628 Catalase-related immune-responsive CXB48_RS00205 PF18011 C-terminal domain found in long catalases CXB48_RS00205 PF00199 Catalase CXB48_RS00215 PF00950 ABC 3 transport family CXB48_RS00220 PF00005 ABC transporter CXB48_RS00225 PF01475 Ferric uptake regulator family CXB48_RS00230 PF01297 Zinc-uptake complex component A periplasmic CXB48_RS00235 PF00202 Aminotransferase class-III CXB48_RS00240 PF00171 Aldehyde dehydrogenase family CXB48_RS00245 PF00535 Glycosyl transferase family 2 CXB48_RS00260 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS00260 PF00072 Response regulator receiver domain CXB48_RS00265 PF00672 HAMP domain CXB48_RS00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS00265 PF18698 Histidine kinase sensor domain CXB48_RS00265 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS00265 PF00989 PAS fold CXB48_RS00270 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS00270 PF00072 Response regulator receiver domain CXB48_RS00275 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS00275 PF00072 Response regulator receiver domain CXB48_RS00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS00280 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS00280 PF00989 PAS fold CXB48_RS00280 PF16736 Single Cache-like CXB48_RS00290 PF00072 Response regulator receiver domain CXB48_RS00290 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS00295 PF00989 PAS fold CXB48_RS00295 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS00305 PF07694 5TMR of 5TMR-LYT CXB48_RS00305 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS00315 PF04371 Porphyromonas-type peptidyl-arginine deiminase CXB48_RS00320 PF00795 Carbon-nitrogen hydrolase CXB48_RS00330 PF00120 Glutamine synthetase, catalytic domain CXB48_RS00335 PF07722 Peptidase C26 CXB48_RS00340 PF00120 Glutamine synthetase, catalytic domain CXB48_RS00345 PF00202 Aminotransferase class-III CXB48_RS00350 PF13416 Bacterial extracellular solute-binding protein CXB48_RS00360 PF13416 Bacterial extracellular solute-binding protein CXB48_RS00365 PF08402 TOBE domain CXB48_RS00365 PF00005 ABC transporter CXB48_RS00370 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS00375 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS00405 PF01610 Transposase CXB48_RS00405 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS00405 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS00410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXB48_RS00415 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CXB48_RS00420 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS00425 PF02954 Bacterial regulatory protein, Fis family CXB48_RS00425 PF00072 Response regulator receiver domain CXB48_RS00425 PF00158 Sigma-54 interaction domain CXB48_RS00430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS00430 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS00430 PF02743 Cache domain CXB48_RS00435 PF04321 RmlD substrate binding domain CXB48_RS00440 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CXB48_RS00445 PF00483 Nucleotidyl transferase CXB48_RS00450 PF16363 GDP-mannose 4,6 dehydratase CXB48_RS00460 PF00005 ABC transporter CXB48_RS00465 PF13533 Biotin-lipoyl like CXB48_RS00480 PF00005 ABC transporter CXB48_RS00485 PF02405 Permease MlaE CXB48_RS00490 PF00199 Catalase CXB48_RS00505 PF01292 Prokaryotic cytochrome b561 CXB48_RS00510 PF01322 Cytochrome C' CXB48_RS00515 PF00171 Aldehyde dehydrogenase family CXB48_RS00520 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS00520 PF00072 Response regulator receiver domain CXB48_RS00525 PF00378 Enoyl-CoA hydratase/isomerase CXB48_RS00525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXB48_RS00525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXB48_RS00530 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS00530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS00530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS00535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS00535 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS00535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS00540 PF07690 Major Facilitator Superfamily CXB48_RS00555 PF09339 IclR helix-turn-helix domain CXB48_RS00560 PF13193 AMP-binding enzyme C-terminal domain CXB48_RS00560 PF00501 AMP-binding enzyme CXB48_RS00565 PF00830 Ribosomal L28 family CXB48_RS00570 PF00471 Ribosomal protein L33 CXB48_RS00585 PF11892 Domain of unknown function (DUF3412) CXB48_RS00585 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CXB48_RS00585 PF03641 Possible lysine decarboxylase CXB48_RS00590 PF01636 Phosphotransferase enzyme family CXB48_RS00600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CXB48_RS00600 PF00476 DNA polymerase family A CXB48_RS00600 PF01612 3'-5' exonuclease CXB48_RS00600 PF01367 5'-3' exonuclease, C-terminal SAM fold CXB48_RS00630 PF02311 AraC-like ligand binding domain CXB48_RS00630 PF12833 Helix-turn-helix domain CXB48_RS00635 PF13593 SBF-like CPA transporter family (DUF4137) CXB48_RS00640 PF02525 Flavodoxin-like fold CXB48_RS00645 PF02233 NAD(P) transhydrogenase beta subunit CXB48_RS00650 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CXB48_RS00655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CXB48_RS00655 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CXB48_RS00660 PF00437 Type II/IV secretion system protein CXB48_RS00665 PF00482 Type II secretion system (T2SS), protein F CXB48_RS00670 PF07963 Prokaryotic N-terminal methylation motif CXB48_RS00670 PF08334 Type II secretion system (T2SS), protein G CXB48_RS00675 PF12019 Type II transport protein GspH CXB48_RS00675 PF07963 Prokaryotic N-terminal methylation motif CXB48_RS00680 PF07963 Prokaryotic N-terminal methylation motif CXB48_RS00680 PF02501 Type II secretion system (T2SS), protein I CXB48_RS00685 PF07963 Prokaryotic N-terminal methylation motif CXB48_RS00685 PF11612 Type II secretion system (T2SS), protein J CXB48_RS00690 PF03934 Type II secretion system (T2SS), protein K CXB48_RS00695 PF12693 GspL periplasmic domain CXB48_RS00695 PF05134 Type II secretion system (T2SS), protein L CXB48_RS00710 PF00270 DEAD/DEAH box helicase CXB48_RS00710 PF17191 RecG wedge domain CXB48_RS00710 PF00271 Helicase conserved C-terminal domain CXB48_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS00715 PF03466 LysR substrate binding domain CXB48_RS00725 PF00107 Zinc-binding dehydrogenase CXB48_RS00725 PF13823 Alcohol dehydrogenase GroES-associated CXB48_RS00725 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS00740 PF05175 Methyltransferase small domain CXB48_RS00755 PF10282 Lactonase, 7-bladed beta-propeller CXB48_RS00760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS00760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS00760 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS00765 PF13426 PAS domain CXB48_RS00765 PF00072 Response regulator receiver domain CXB48_RS00780 PF00593 TonB dependent receptor CXB48_RS00780 PF07715 TonB-dependent Receptor Plug Domain CXB48_RS00790 PF03795 YCII-related domain CXB48_RS00795 PF08281 Sigma-70, region 4 CXB48_RS00795 PF04542 Sigma-70 region 2 CXB48_RS00800 PF02954 Bacterial regulatory protein, Fis family CXB48_RS00800 PF00072 Response regulator receiver domain CXB48_RS00800 PF00158 Sigma-54 interaction domain CXB48_RS00805 PF02743 Cache domain CXB48_RS00805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS00805 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS00810 PF01966 HD domain CXB48_RS00810 PF11871 Domain of unknown function (DUF3391) CXB48_RS00815 PF00582 Universal stress protein family CXB48_RS00830 PF01597 Glycine cleavage H-protein CXB48_RS00845 PF09107 Elongation factor SelB, winged helix CXB48_RS00845 PF09106 Elongation factor SelB, winged helix CXB48_RS00845 PF03144 Elongation factor Tu domain 2 CXB48_RS00845 PF00009 Elongation factor Tu GTP binding domain CXB48_RS00850 PF03841 L-seryl-tRNA selenium transferase CXB48_RS00850 PF12390 Selenocysteine synthase N terminal CXB48_RS00855 PF04216 Protein involved in formate dehydrogenase formation CXB48_RS00860 PF01292 Prokaryotic cytochrome b561 CXB48_RS00865 PF09163 Formate dehydrogenase N, transmembrane CXB48_RS00865 PF13247 4Fe-4S dicluster domain CXB48_RS00870 PF01568 Molydopterin dinucleotide binding domain CXB48_RS00870 PF00384 Molybdopterin oxidoreductase CXB48_RS00870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CXB48_RS00875 PF00384 Molybdopterin oxidoreductase CXB48_RS00875 PF01568 Molydopterin dinucleotide binding domain CXB48_RS00875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CXB48_RS00880 PF12833 Helix-turn-helix domain CXB48_RS00880 PF12852 Cupin CXB48_RS00885 PF02566 OsmC-like protein CXB48_RS00890 PF00561 alpha/beta hydrolase fold CXB48_RS00900 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS00905 PF00580 UvrD/REP helicase N-terminal domain CXB48_RS00905 PF13361 UvrD-like helicase C-terminal domain CXB48_RS00910 PF00563 EAL domain CXB48_RS00910 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS00910 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS00915 PF01136 Peptidase family U32 CXB48_RS00915 PF16325 Peptidase family U32 C-terminal domain CXB48_RS00920 PF04325 Protein of unknown function (DUF465) CXB48_RS00925 PF00696 Amino acid kinase family CXB48_RS00925 PF13840 ACT domain CXB48_RS00930 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CXB48_RS00935 PF06339 Ectoine synthase CXB48_RS00940 PF00202 Aminotransferase class-III CXB48_RS00945 PF00583 Acetyltransferase (GNAT) family CXB48_RS00950 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CXB48_RS00950 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CXB48_RS00955 PF01418 Helix-turn-helix domain, rpiR family CXB48_RS00955 PF01380 SIS domain CXB48_RS00955 PF02685 Glucokinase CXB48_RS00965 PF03466 LysR substrate binding domain CXB48_RS00965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS00970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CXB48_RS00970 PF00289 Biotin carboxylase, N-terminal domain CXB48_RS00970 PF02785 Biotin carboxylase C-terminal domain CXB48_RS00975 PF02436 Conserved carboxylase domain CXB48_RS00975 PF00364 Biotin-requiring enzyme CXB48_RS00975 PF00682 HMGL-like CXB48_RS00990 PF04960 Glutaminase CXB48_RS00995 PF00484 Carbonic anhydrase CXB48_RS01005 PF17763 Glutaminase/Asparaginase C-terminal domain CXB48_RS01005 PF00710 Asparaginase, N-terminal CXB48_RS01010 PF01235 Sodium:alanine symporter family CXB48_RS01020 PF00375 Sodium:dicarboxylate symporter family CXB48_RS01025 PF10415 Fumarase C C-terminus CXB48_RS01025 PF00206 Lyase CXB48_RS01030 PF03466 LysR substrate binding domain CXB48_RS01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS01035 PF00501 AMP-binding enzyme CXB48_RS01035 PF13193 AMP-binding enzyme C-terminal domain CXB48_RS01040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CXB48_RS01040 PF01261 Xylose isomerase-like TIM barrel CXB48_RS01045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS01045 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS01050 PF00731 AIR carboxylase CXB48_RS01055 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CXB48_RS01055 PF02222 ATP-grasp domain CXB48_RS01075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXB48_RS01075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CXB48_RS01080 PF00005 ABC transporter CXB48_RS01080 PF12857 TOBE-like domain CXB48_RS01085 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS01090 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS01100 PF10055 Uncharacterized small protein (DUF2292) CXB48_RS01110 PF10417 C-terminal domain of 1-Cys peroxiredoxin CXB48_RS01110 PF00578 AhpC/TSA family CXB48_RS01130 PF14338 Mrr N-terminal domain CXB48_RS01130 PF04471 Restriction endonuclease CXB48_RS01135 PF01420 Type I restriction modification DNA specificity domain CXB48_RS01140 PF01420 Type I restriction modification DNA specificity domain CXB48_RS01145 PF02384 N-6 DNA Methylase CXB48_RS01160 PF00271 Helicase conserved C-terminal domain CXB48_RS01160 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CXB48_RS01160 PF08463 EcoEI R protein C-terminal CXB48_RS01160 PF04851 Type III restriction enzyme, res subunit CXB48_RS01195 PF05973 Phage derived protein Gp49-like (DUF891) CXB48_RS01200 PF01381 Helix-turn-helix CXB48_RS01240 PF10548 P22AR C-terminal domain CXB48_RS01240 PF08346 AntA/AntB antirepressor CXB48_RS01265 PF15723 Motility quorum-sensing regulator, toxin of MqsA CXB48_RS01425 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CXB48_RS01440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXB48_RS01450 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS01455 PF02566 OsmC-like protein CXB48_RS01465 PF08448 PAS fold CXB48_RS01465 PF13188 PAS domain CXB48_RS01465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS01465 PF00072 Response regulator receiver domain CXB48_RS01465 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS01470 PF03734 L,D-transpeptidase catalytic domain CXB48_RS01470 PF01471 Putative peptidoglycan binding domain CXB48_RS01480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CXB48_RS01480 PF00437 Type II/IV secretion system protein CXB48_RS01490 PF01865 Protein of unknown function DUF47 CXB48_RS01495 PF01384 Phosphate transporter family CXB48_RS01500 PF01546 Peptidase family M20/M25/M40 CXB48_RS01500 PF07687 Peptidase dimerisation domain CXB48_RS01505 PF00583 Acetyltransferase (GNAT) family CXB48_RS01505 PF00696 Amino acid kinase family CXB48_RS01510 PF04262 Glutamate-cysteine ligase CXB48_RS01520 PF00575 S1 RNA binding domain CXB48_RS01520 PF17674 HHH domain CXB48_RS01520 PF09371 Tex-like protein N-terminal domain CXB48_RS01520 PF16921 Tex protein YqgF-like domain CXB48_RS01525 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CXB48_RS01530 PF03170 Bacterial cellulose synthase subunit CXB48_RS01535 PF00535 Glycosyl transferase family 2 CXB48_RS01535 PF07238 PilZ domain CXB48_RS01535 PF03552 Cellulose synthase CXB48_RS01540 PF06564 Cellulose biosynthesis protein BcsQ CXB48_RS01550 PF11658 Cellulose biosynthesis protein BcsG CXB48_RS01560 PF10995 Cellulose biosynthesis GIL CXB48_RS01565 PF01219 Prokaryotic diacylglycerol kinase CXB48_RS01570 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS01570 PF00072 Response regulator receiver domain CXB48_RS01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS01575 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS01575 PF00672 HAMP domain CXB48_RS01580 PF18030 RimK PreATP-grasp domain CXB48_RS01580 PF08443 RimK-like ATP-grasp domain CXB48_RS01585 PF08443 RimK-like ATP-grasp domain CXB48_RS01585 PF18030 RimK PreATP-grasp domain CXB48_RS01590 PF01479 S4 domain CXB48_RS01600 PF01430 Hsp33 protein CXB48_RS01605 PF01293 Phosphoenolpyruvate carboxykinase CXB48_RS01610 PF00881 Nitroreductase family CXB48_RS01620 PF00570 HRDC domain CXB48_RS01620 PF16124 RecQ zinc-binding CXB48_RS01620 PF00271 Helicase conserved C-terminal domain CXB48_RS01620 PF09382 RQC domain CXB48_RS01620 PF00270 DEAD/DEAH box helicase CXB48_RS01625 PF00672 HAMP domain CXB48_RS01625 PF13426 PAS domain CXB48_RS01625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS01630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS01630 PF00672 HAMP domain CXB48_RS01640 PF00248 Aldo/keto reductase family CXB48_RS01665 PF13426 PAS domain CXB48_RS01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS01665 PF00072 Response regulator receiver domain CXB48_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS01670 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS01680 PF13581 Histidine kinase-like ATPase domain CXB48_RS01685 PF01740 STAS domain CXB48_RS01690 PF08678 Rsbr N terminal CXB48_RS01690 PF01740 STAS domain CXB48_RS01695 PF03466 LysR substrate binding domain CXB48_RS01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS01700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXB48_RS01700 PF00378 Enoyl-CoA hydratase/isomerase CXB48_RS01700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXB48_RS01705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS01705 PF12806 Acetyl-CoA dehydrogenase C-terminal like CXB48_RS01705 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS01705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS01710 PF00465 Iron-containing alcohol dehydrogenase CXB48_RS01725 PF02634 FdhD/NarQ family CXB48_RS01730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS01730 PF13426 PAS domain CXB48_RS01730 PF00072 Response regulator receiver domain CXB48_RS01735 PF13419 Haloacid dehalogenase-like hydrolase CXB48_RS01740 PF00293 NUDIX domain CXB48_RS01745 PF00459 Inositol monophosphatase family CXB48_RS01760 PF00343 Carbohydrate phosphorylase CXB48_RS01765 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CXB48_RS01790 PF00561 alpha/beta hydrolase fold CXB48_RS01795 PF02580 D-Tyr-tRNA(Tyr) deacylase CXB48_RS01800 PF03682 Uncharacterised protein family (UPF0158) CXB48_RS01810 PF00902 Sec-independent protein translocase protein (TatC) CXB48_RS01815 PF02416 mttA/Hcf106 family CXB48_RS01820 PF02416 mttA/Hcf106 family CXB48_RS01825 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CXB48_RS01830 PF01502 Phosphoribosyl-AMP cyclohydrolase CXB48_RS01835 PF03109 ABC1 family CXB48_RS01845 PF01209 ubiE/COQ5 methyltransferase family CXB48_RS01855 PF16591 Helical bimodular sensor domain CXB48_RS01855 PF00672 HAMP domain CXB48_RS01855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS01865 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS01865 PF07724 AAA domain (Cdc48 subfamily) CXB48_RS01870 PF00227 Proteasome subunit CXB48_RS01875 PF00384 Molybdopterin oxidoreductase CXB48_RS01880 PF00588 SpoU rRNA Methylase family CXB48_RS01890 PF00158 Sigma-54 interaction domain CXB48_RS01890 PF00072 Response regulator receiver domain CXB48_RS01890 PF02954 Bacterial regulatory protein, Fis family CXB48_RS01895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS01895 PF00989 PAS fold CXB48_RS01895 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS01910 PF00120 Glutamine synthetase, catalytic domain CXB48_RS01910 PF03951 Glutamine synthetase, beta-Grasp domain CXB48_RS01915 PF02568 Thiamine biosynthesis protein (ThiI) CXB48_RS01915 PF02926 THUMP domain CXB48_RS01920 PF03144 Elongation factor Tu domain 2 CXB48_RS01920 PF00009 Elongation factor Tu GTP binding domain CXB48_RS01920 PF00679 Elongation factor G C-terminus CXB48_RS01925 PF00672 HAMP domain CXB48_RS01925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS01930 PF03390 2-hydroxycarboxylate transporter family CXB48_RS01935 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CXB48_RS01935 PF17203 Single cache domain 3 CXB48_RS01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS01935 PF00989 PAS fold CXB48_RS01940 PF00072 Response regulator receiver domain CXB48_RS01950 PF12697 Alpha/beta hydrolase family CXB48_RS01960 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS01960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS01960 PF08448 PAS fold CXB48_RS01960 PF13188 PAS domain CXB48_RS01960 PF00072 Response regulator receiver domain CXB48_RS01965 PF00158 Sigma-54 interaction domain CXB48_RS01965 PF02954 Bacterial regulatory protein, Fis family CXB48_RS01965 PF00072 Response regulator receiver domain CXB48_RS01970 PF07308 Protein of unknown function (DUF1456) CXB48_RS01980 PF00034 Cytochrome c CXB48_RS01995 PF00563 EAL domain CXB48_RS01995 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS02000 PF13416 Bacterial extracellular solute-binding protein CXB48_RS02005 PF00156 Phosphoribosyl transferase domain CXB48_RS02005 PF01738 Dienelactone hydrolase family CXB48_RS02010 PF00156 Phosphoribosyl transferase domain CXB48_RS02010 PF01738 Dienelactone hydrolase family CXB48_RS02015 PF00106 short chain dehydrogenase CXB48_RS02020 PF02374 Anion-transporting ATPase CXB48_RS02030 PF02554 Carbon starvation protein CstA CXB48_RS02030 PF13722 5TM C-terminal transporter carbon starvation CstA CXB48_RS02045 PF03334 Na+/H+ antiporter subunit CXB48_RS02060 PF00361 Proton-conducting membrane transporter CXB48_RS02060 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CXB48_RS02065 PF00361 Proton-conducting membrane transporter CXB48_RS02070 PF00361 Proton-conducting membrane transporter CXB48_RS02080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS02085 PF00072 Response regulator receiver domain CXB48_RS02085 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS02110 PF00072 Response regulator receiver domain CXB48_RS02110 PF00196 Bacterial regulatory proteins, luxR family CXB48_RS02130 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS02130 PF01610 Transposase CXB48_RS02130 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS02145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXB48_RS02145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CXB48_RS02150 PF02913 FAD linked oxidases, C-terminal domain CXB48_RS02150 PF01565 FAD binding domain CXB48_RS02155 PF01557 Fumarylacetoacetate (FAA) hydrolase family CXB48_RS02160 PF06977 SdiA-regulated CXB48_RS02170 PF07411 Domain of unknown function (DUF1508) CXB48_RS02175 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CXB48_RS02180 PF00585 C-terminal regulatory domain of Threonine dehydratase CXB48_RS02180 PF00291 Pyridoxal-phosphate dependent enzyme CXB48_RS02200 PF00293 NUDIX domain CXB48_RS02205 PF05524 PEP-utilising enzyme, N-terminal CXB48_RS02205 PF01590 GAF domain CXB48_RS02205 PF00391 PEP-utilising enzyme, mobile domain CXB48_RS02205 PF02896 PEP-utilising enzyme, TIM barrel domain CXB48_RS02215 PF01925 Sulfite exporter TauE/SafE CXB48_RS02220 PF01790 Prolipoprotein diacylglyceryl transferase CXB48_RS02225 PF00303 Thymidylate synthase CXB48_RS02230 PF13614 AAA domain CXB48_RS02240 PF02653 Branched-chain amino acid transport system / permease component CXB48_RS02245 PF00005 ABC transporter CXB48_RS02250 PF00005 ABC transporter CXB48_RS02250 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXB48_RS02265 PF00072 Response regulator receiver domain CXB48_RS02270 PF01476 LysM domain CXB48_RS02270 PF08525 Opacity-associated protein A N-terminal motif CXB48_RS02270 PF01551 Peptidase family M23 CXB48_RS02280 PF00571 CBS domain CXB48_RS02280 PF03471 Transporter associated domain CXB48_RS02280 PF01595 Cyclin M transmembrane N-terminal domain CXB48_RS02285 PF11808 Phosphate regulon sensor protein PhoR CXB48_RS02285 PF00989 PAS fold CXB48_RS02285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS02285 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS02290 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS02290 PF00072 Response regulator receiver domain CXB48_RS02295 PF01040 UbiA prenyltransferase family CXB48_RS02300 PF04345 Chorismate lyase CXB48_RS02305 PF07729 FCD domain CXB48_RS02305 PF00392 Bacterial regulatory proteins, gntR family CXB48_RS02310 PF01565 FAD binding domain CXB48_RS02310 PF02913 FAD linked oxidases, C-terminal domain CXB48_RS02315 PF01565 FAD binding domain CXB48_RS02320 PF13183 4Fe-4S dicluster domain CXB48_RS02320 PF02754 Cysteine-rich domain CXB48_RS02325 PF03928 Haem-degrading CXB48_RS02330 PF01274 Malate synthase CXB48_RS02335 PF02652 L-lactate permease CXB48_RS02340 PF00301 Rubredoxin CXB48_RS02345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS02345 PF18113 Rubredoxin binding C-terminal domain CXB48_RS02350 PF00216 Bacterial DNA-binding protein CXB48_RS02360 PF03466 LysR substrate binding domain CXB48_RS02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS02365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS02365 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS02365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS02370 PF02515 CoA-transferase family III CXB48_RS02375 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS02375 PF00107 Zinc-binding dehydrogenase CXB48_RS02380 PF03466 LysR substrate binding domain CXB48_RS02380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS02385 PF04011 LemA family CXB48_RS02390 PF04536 TPM domain CXB48_RS02405 PF12833 Helix-turn-helix domain CXB48_RS02405 PF02311 AraC-like ligand binding domain CXB48_RS02410 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS02410 PF17862 AAA+ lid domain CXB48_RS02410 PF01434 Peptidase family M41 CXB48_RS02420 PF00034 Cytochrome c CXB48_RS02420 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXB48_RS02425 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CXB48_RS02430 PF00111 2Fe-2S iron-sulfur cluster binding domain CXB48_RS02430 PF01799 [2Fe-2S] binding domain CXB48_RS02445 PF01042 Endoribonuclease L-PSP CXB48_RS02450 PF13291 ACT domain CXB48_RS02450 PF04607 Region found in RelA / SpoT proteins CXB48_RS02450 PF02824 TGS domain CXB48_RS02455 PF01192 RNA polymerase Rpb6 CXB48_RS02460 PF00625 Guanylate kinase CXB48_RS02465 PF03755 YicC-like family, N-terminal region CXB48_RS02465 PF08340 Domain of unknown function (DUF1732) CXB48_RS02470 PF01138 3' exoribonuclease family, domain 1 CXB48_RS02470 PF03725 3' exoribonuclease family, domain 2 CXB48_RS02480 PF03372 Endonuclease/Exonuclease/phosphatase family CXB48_RS02485 PF00156 Phosphoribosyl transferase domain CXB48_RS02500 PF00696 Amino acid kinase family CXB48_RS02505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CXB48_RS02505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CXB48_RS02505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CXB48_RS02505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CXB48_RS02510 PF00692 dUTPase CXB48_RS02515 PF02441 Flavoprotein CXB48_RS02515 PF04127 DNA / pantothenate metabolism flavoprotein CXB48_RS02520 PF04002 RadC-like JAB domain CXB48_RS02535 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CXB48_RS02535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXB48_RS02535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXB48_RS02540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS02540 PF02743 Cache domain CXB48_RS02540 PF00672 HAMP domain CXB48_RS02555 PF13091 PLD-like domain CXB48_RS02560 PF01266 FAD dependent oxidoreductase CXB48_RS02565 PF01037 Lrp/AsnC ligand binding domain CXB48_RS02570 PF01266 FAD dependent oxidoreductase CXB48_RS02575 PF01042 Endoribonuclease L-PSP CXB48_RS02585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXB48_RS02595 PF00156 Phosphoribosyl transferase domain CXB48_RS02605 PF00128 Alpha amylase, catalytic domain CXB48_RS02605 PF16657 Maltogenic Amylase, C-terminal domain CXB48_RS02610 PF00128 Alpha amylase, catalytic domain CXB48_RS02615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CXB48_RS02615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CXB48_RS02625 PF00465 Iron-containing alcohol dehydrogenase CXB48_RS02630 PF00171 Aldehyde dehydrogenase family CXB48_RS02635 PF01614 Bacterial transcriptional regulator CXB48_RS02635 PF09339 IclR helix-turn-helix domain CXB48_RS02640 PF03006 Haemolysin-III related CXB48_RS02645 PF13361 UvrD-like helicase C-terminal domain CXB48_RS02645 PF00580 UvrD/REP helicase N-terminal domain CXB48_RS02650 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS02650 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS02650 PF00563 EAL domain CXB48_RS02655 PF02028 BCCT, betaine/carnitine/choline family transporter CXB48_RS02660 PF13335 Magnesium chelatase, subunit ChlI C-terminal CXB48_RS02660 PF01078 Magnesium chelatase, subunit ChlI CXB48_RS02670 PF00543 Nitrogen regulatory protein P-II CXB48_RS02675 PF00909 Ammonium Transporter Family CXB48_RS02680 PF00909 Ammonium Transporter Family CXB48_RS02695 PF13419 Haloacid dehalogenase-like hydrolase CXB48_RS02700 PF02899 Phage integrase, N-terminal SAM-like domain CXB48_RS02700 PF00589 Phage integrase family CXB48_RS02710 PF01678 Diaminopimelate epimerase CXB48_RS02715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CXB48_RS02715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CXB48_RS02720 PF13627 Prokaryotic lipoprotein-attachment site CXB48_RS02725 PF01491 Frataxin-like domain CXB48_RS02730 PF14760 Rnk N-terminus CXB48_RS02730 PF01272 Transcription elongation factor, GreA/GreB, C-term CXB48_RS02740 PF01295 Adenylate cyclase, class-I CXB48_RS02740 PF12633 Adenylate cyclase NT domain CXB48_RS02765 PF00206 Lyase CXB48_RS02765 PF14698 Argininosuccinate lyase C-terminal CXB48_RS02775 PF06580 Histidine kinase CXB48_RS02775 PF07694 5TMR of 5TMR-LYT CXB48_RS02780 PF04397 LytTr DNA-binding domain CXB48_RS02780 PF00072 Response regulator receiver domain CXB48_RS02785 PF03900 Porphobilinogen deaminase, C-terminal domain CXB48_RS02785 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CXB48_RS02790 PF02602 Uroporphyrinogen-III synthase HemD CXB48_RS02805 PF02600 Disulfide bond formation protein DsbB CXB48_RS02810 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CXB48_RS02825 PF01610 Transposase CXB48_RS02825 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS02825 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS02830 PF12848 ABC transporter CXB48_RS02830 PF00005 ABC transporter CXB48_RS02840 PF03741 Integral membrane protein TerC family CXB48_RS02845 PF01810 LysE type translocator CXB48_RS02850 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CXB48_RS02855 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS02855 PF00563 EAL domain CXB48_RS02855 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS02860 PF03061 Thioesterase superfamily CXB48_RS02870 PF00490 Delta-aminolevulinic acid dehydratase CXB48_RS02875 PF13090 Polyphosphate kinase C-terminal domain 2 CXB48_RS02875 PF02503 Polyphosphate kinase middle domain CXB48_RS02875 PF13089 Polyphosphate kinase N-terminal domain CXB48_RS02875 PF17941 Polyphosphate kinase C-terminal domain 1 CXB48_RS02880 PF02541 Ppx/GppA phosphatase family CXB48_RS02885 PF00085 Thioredoxin CXB48_RS02890 PF07498 Rho termination factor, N-terminal domain CXB48_RS02890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CXB48_RS02890 PF07497 Rho termination factor, RNA-binding domain CXB48_RS02895 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CXB48_RS02900 PF00175 Oxidoreductase NAD-binding domain CXB48_RS02910 PF00750 tRNA synthetases class I (R) CXB48_RS02910 PF03485 Arginyl tRNA synthetase N terminal domain CXB48_RS02910 PF05746 DALR anticodon binding domain CXB48_RS02915 PF18074 Primosomal protein N C-terminal domain CXB48_RS02915 PF00270 DEAD/DEAH box helicase CXB48_RS02915 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CXB48_RS02915 PF17764 3′ DNA-binding domain (3′BD) CXB48_RS02915 PF00271 Helicase conserved C-terminal domain CXB48_RS02920 PF01197 Ribosomal protein L31 CXB48_RS02930 PF00390 Malic enzyme, N-terminal domain CXB48_RS02930 PF03949 Malic enzyme, NAD binding domain CXB48_RS02935 PF00912 Transglycosylase CXB48_RS02935 PF00905 Penicillin binding protein transpeptidase domain CXB48_RS02935 PF17092 Penicillin-binding protein OB-like domain CXB48_RS02940 PF11104 Type IV pilus assembly protein PilM; CXB48_RS02945 PF05137 Fimbrial assembly protein (PilN) CXB48_RS02950 PF04350 Pilus assembly protein, PilO CXB48_RS02955 PF04351 Pilus assembly protein, PilP CXB48_RS02960 PF11741 AMIN domain CXB48_RS02960 PF07660 Secretin and TonB N terminus short domain CXB48_RS02960 PF00263 Bacterial type II and III secretion system protein CXB48_RS02960 PF03958 Bacterial type II/III secretion system short domain CXB48_RS02965 PF01202 Shikimate kinase CXB48_RS02970 PF01761 3-dehydroquinate synthase CXB48_RS02975 PF05036 Sporulation related domain CXB48_RS02980 PF00310 Glutamine amidotransferases class-II CXB48_RS02980 PF04898 Glutamate synthase central domain CXB48_RS02980 PF01645 Conserved region in glutamate synthase CXB48_RS02980 PF01493 GXGXG motif CXB48_RS02985 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS02985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CXB48_RS02990 PF01208 Uroporphyrinogen decarboxylase (URO-D) CXB48_RS02995 PF07690 Major Facilitator Superfamily CXB48_RS03000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS03000 PF03466 LysR substrate binding domain CXB48_RS03010 PF00085 Thioredoxin CXB48_RS03015 PF01053 Cys/Met metabolism PLP-dependent enzyme CXB48_RS03020 PF03600 Citrate transporter CXB48_RS03020 PF02080 TrkA-C domain CXB48_RS03025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS03025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS03025 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS03030 PF09339 IclR helix-turn-helix domain CXB48_RS03035 PF00378 Enoyl-CoA hydratase/isomerase CXB48_RS03040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXB48_RS03040 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CXB48_RS03040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXB48_RS03045 PF02803 Thiolase, C-terminal domain CXB48_RS03045 PF00108 Thiolase, N-terminal domain CXB48_RS03050 PF02515 CoA-transferase family III CXB48_RS03055 PF03401 Tripartite tricarboxylate transporter family receptor CXB48_RS03065 PF01970 Tripartite tricarboxylate transporter TctA family CXB48_RS03070 PF01012 Electron transfer flavoprotein domain CXB48_RS03075 PF00766 Electron transfer flavoprotein FAD-binding domain CXB48_RS03075 PF01012 Electron transfer flavoprotein domain CXB48_RS03085 PF04471 Restriction endonuclease CXB48_RS03085 PF14338 Mrr N-terminal domain CXB48_RS03095 PF01420 Type I restriction modification DNA specificity domain CXB48_RS03100 PF02384 N-6 DNA Methylase CXB48_RS03110 PF08463 EcoEI R protein C-terminal CXB48_RS03110 PF00271 Helicase conserved C-terminal domain CXB48_RS03110 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CXB48_RS03110 PF04851 Type III restriction enzyme, res subunit CXB48_RS03130 PF13545 Crp-like helix-turn-helix domain CXB48_RS03130 PF00027 Cyclic nucleotide-binding domain CXB48_RS03135 PF04542 Sigma-70 region 2 CXB48_RS03135 PF04546 Sigma-70, non-essential region CXB48_RS03135 PF04539 Sigma-70 region 3 CXB48_RS03135 PF04545 Sigma-70, region 4 CXB48_RS03135 PF00140 Sigma-70 factor, region 1.2 CXB48_RS03135 PF03979 Sigma-70 factor, region 1.1 CXB48_RS03140 PF08278 DNA primase DnaG DnaB-binding CXB48_RS03140 PF13662 Toprim domain CXB48_RS03140 PF08275 DNA primase catalytic core, N-terminal domain CXB48_RS03140 PF01807 CHC2 zinc finger CXB48_RS03140 PF10410 DnaB-helicase binding domain of primase CXB48_RS03145 PF01165 Ribosomal protein S21 CXB48_RS03150 PF00814 Glycoprotease family CXB48_RS03155 PF02660 Glycerol-3-phosphate acyltransferase CXB48_RS03165 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CXB48_RS03170 PF01966 HD domain CXB48_RS03170 PF01743 Poly A polymerase head domain CXB48_RS03170 PF12627 Probable RNA and SrmB- binding site of polymerase A CXB48_RS03175 PF04293 SpoVR like protein CXB48_RS03180 PF04285 Protein of unknown function (DUF444) CXB48_RS03185 PF06798 PrkA serine protein kinase C-terminal domain CXB48_RS03185 PF08298 PrkA AAA domain CXB48_RS03190 PF00581 Rhodanese-like domain CXB48_RS03195 PF00149 Calcineurin-like phosphoesterase CXB48_RS03200 PF04379 ApaG domain CXB48_RS03205 PF00398 Ribosomal RNA adenine dimethylase CXB48_RS03210 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CXB48_RS03215 PF00639 PPIC-type PPIASE domain CXB48_RS03215 PF09312 SurA N-terminal domain CXB48_RS03220 PF04453 LPS transport system D CXB48_RS03220 PF03968 OstA-like protein CXB48_RS03225 PF01636 Phosphotransferase enzyme family CXB48_RS03230 PF00483 Nucleotidyl transferase CXB48_RS03235 PF00226 DnaJ domain CXB48_RS03235 PF05099 Tellurite resistance protein TerB CXB48_RS03245 PF05384 Sensor protein DegS CXB48_RS03245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS03245 PF07730 Histidine kinase CXB48_RS03250 PF00072 Response regulator receiver domain CXB48_RS03250 PF00196 Bacterial regulatory proteins, luxR family CXB48_RS03255 PF08402 TOBE domain CXB48_RS03255 PF00005 ABC transporter CXB48_RS03265 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS03270 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS03280 PF00202 Aminotransferase class-III CXB48_RS03285 PF00834 Ribulose-phosphate 3 epimerase family CXB48_RS03290 PF13419 Haloacid dehalogenase-like hydrolase CXB48_RS03295 PF04715 Anthranilate synthase component I, N terminal region CXB48_RS03295 PF00425 chorismate binding enzyme CXB48_RS03300 PF00117 Glutamine amidotransferase class-I CXB48_RS03305 PF00591 Glycosyl transferase family, a/b domain CXB48_RS03305 PF02885 Glycosyl transferase family, helical bundle domain CXB48_RS03310 PF00218 Indole-3-glycerol phosphate synthase CXB48_RS03315 PF00027 Cyclic nucleotide-binding domain CXB48_RS03315 PF13545 Crp-like helix-turn-helix domain CXB48_RS03320 PF02566 OsmC-like protein CXB48_RS03325 PF03232 Ubiquinone biosynthesis protein COQ7 CXB48_RS03330 PF01230 HIT domain CXB48_RS03335 PF06480 FtsH Extracellular CXB48_RS03335 PF17862 AAA+ lid domain CXB48_RS03335 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS03335 PF01434 Peptidase family M41 CXB48_RS03345 PF03653 Uncharacterised protein family (UPF0093) CXB48_RS03350 PF01118 Semialdehyde dehydrogenase, NAD binding domain CXB48_RS03350 PF02774 Semialdehyde dehydrogenase, dimerisation domain CXB48_RS03355 PF01521 Iron-sulphur cluster biosynthesis CXB48_RS03360 PF03702 Anhydro-N-acetylmuramic acid kinase CXB48_RS03365 PF01551 Peptidase family M23 CXB48_RS03365 PF04225 Opacity-associated protein A LysM-like domain CXB48_RS03370 PF01479 S4 domain CXB48_RS03370 PF00579 tRNA synthetases class I (W and Y) CXB48_RS03405 PF08279 HTH domain CXB48_RS03405 PF02237 Biotin protein ligase C terminal domain CXB48_RS03405 PF03099 Biotin/lipoate A/B protein ligase family CXB48_RS03410 PF03309 Type III pantothenate kinase CXB48_RS03435 PF03144 Elongation factor Tu domain 2 CXB48_RS03435 PF03143 Elongation factor Tu C-terminal domain CXB48_RS03435 PF00009 Elongation factor Tu GTP binding domain CXB48_RS03445 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CXB48_RS03450 PF00467 KOW motif CXB48_RS03450 PF02357 Transcription termination factor nusG CXB48_RS03455 PF00298 Ribosomal protein L11, RNA binding domain CXB48_RS03455 PF03946 Ribosomal protein L11, N-terminal domain CXB48_RS03460 PF00687 Ribosomal protein L1p/L10e family CXB48_RS03465 PF00466 Ribosomal protein L10 CXB48_RS03470 PF00542 Ribosomal protein L7/L12 C-terminal domain CXB48_RS03470 PF16320 Ribosomal protein L7/L12 dimerisation domain CXB48_RS03475 PF04560 RNA polymerase Rpb2, domain 7 CXB48_RS03475 PF04563 RNA polymerase beta subunit CXB48_RS03475 PF00562 RNA polymerase Rpb2, domain 6 CXB48_RS03475 PF10385 RNA polymerase beta subunit external 1 domain CXB48_RS03475 PF04565 RNA polymerase Rpb2, domain 3 CXB48_RS03475 PF04561 RNA polymerase Rpb2, domain 2 CXB48_RS03480 PF04983 RNA polymerase Rpb1, domain 3 CXB48_RS03480 PF04997 RNA polymerase Rpb1, domain 1 CXB48_RS03480 PF04998 RNA polymerase Rpb1, domain 5 CXB48_RS03480 PF05000 RNA polymerase Rpb1, domain 4 CXB48_RS03480 PF00623 RNA polymerase Rpb1, domain 2 CXB48_RS03485 PF00164 Ribosomal protein S12/S23 CXB48_RS03490 PF00177 Ribosomal protein S7p/S5e CXB48_RS03495 PF03764 Elongation factor G, domain IV CXB48_RS03495 PF14492 Elongation Factor G, domain II CXB48_RS03495 PF03144 Elongation factor Tu domain 2 CXB48_RS03495 PF00679 Elongation factor G C-terminus CXB48_RS03495 PF00009 Elongation factor Tu GTP binding domain CXB48_RS03500 PF03143 Elongation factor Tu C-terminal domain CXB48_RS03500 PF00009 Elongation factor Tu GTP binding domain CXB48_RS03500 PF03144 Elongation factor Tu domain 2 CXB48_RS03505 PF00338 Ribosomal protein S10p/S20e CXB48_RS03510 PF00297 Ribosomal protein L3 CXB48_RS03515 PF00573 Ribosomal protein L4/L1 family CXB48_RS03520 PF00276 Ribosomal protein L23 CXB48_RS03525 PF00181 Ribosomal Proteins L2, RNA binding domain CXB48_RS03525 PF03947 Ribosomal Proteins L2, C-terminal domain CXB48_RS03530 PF00203 Ribosomal protein S19 CXB48_RS03535 PF00237 Ribosomal protein L22p/L17e CXB48_RS03540 PF00189 Ribosomal protein S3, C-terminal domain CXB48_RS03540 PF07650 KH domain CXB48_RS03545 PF00252 Ribosomal protein L16p/L10e CXB48_RS03550 PF00831 Ribosomal L29 protein CXB48_RS03555 PF00366 Ribosomal protein S17 CXB48_RS03560 PF00238 Ribosomal protein L14p/L23e CXB48_RS03565 PF00467 KOW motif CXB48_RS03565 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CXB48_RS03570 PF00673 ribosomal L5P family C-terminus CXB48_RS03570 PF00281 Ribosomal protein L5 CXB48_RS03575 PF00253 Ribosomal protein S14p/S29e CXB48_RS03580 PF00410 Ribosomal protein S8 CXB48_RS03585 PF00347 Ribosomal protein L6 CXB48_RS03590 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CXB48_RS03595 PF03719 Ribosomal protein S5, C-terminal domain CXB48_RS03595 PF00333 Ribosomal protein S5, N-terminal domain CXB48_RS03600 PF00327 Ribosomal protein L30p/L7e CXB48_RS03605 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CXB48_RS03610 PF00344 SecY translocase CXB48_RS03615 PF00444 Ribosomal protein L36 CXB48_RS03620 PF00416 Ribosomal protein S13/S18 CXB48_RS03625 PF00411 Ribosomal protein S11 CXB48_RS03630 PF00163 Ribosomal protein S4/S9 N-terminal domain CXB48_RS03630 PF01479 S4 domain CXB48_RS03635 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CXB48_RS03635 PF01000 RNA polymerase Rpb3/RpoA insert domain CXB48_RS03635 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CXB48_RS03640 PF01196 Ribosomal protein L17 CXB48_RS03645 PF00199 Catalase CXB48_RS03645 PF06628 Catalase-related immune-responsive CXB48_RS03650 PF17755 UvrA DNA-binding domain CXB48_RS03650 PF17760 UvrA interaction domain CXB48_RS03655 PF07690 Major Facilitator Superfamily CXB48_RS03660 PF00436 Single-strand binding protein family CXB48_RS03670 PF01370 NAD dependent epimerase/dehydratase family CXB48_RS03680 PF05598 Transposase domain (DUF772) CXB48_RS03680 PF01609 Transposase DDE domain CXB48_RS03695 PF01618 MotA/TolQ/ExbB proton channel family CXB48_RS03700 PF01618 MotA/TolQ/ExbB proton channel family CXB48_RS03705 PF02472 Biopolymer transport protein ExbD/TolR CXB48_RS03710 PF03544 Gram-negative bacterial TonB protein C-terminal CXB48_RS03730 PF00005 ABC transporter CXB48_RS03745 PF00085 Thioredoxin CXB48_RS03750 PF04143 Sulphur transport CXB48_RS03755 PF01206 Sulfurtransferase TusA CXB48_RS03775 PF03477 ATP cone domain CXB48_RS03780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CXB48_RS03780 PF01872 RibD C-terminal domain CXB48_RS03785 PF00677 Lumazine binding domain CXB48_RS03790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CXB48_RS03790 PF00925 GTP cyclohydrolase II CXB48_RS03795 PF00885 6,7-dimethyl-8-ribityllumazine synthase CXB48_RS03800 PF01029 NusB family CXB48_RS03805 PF00586 AIR synthase related protein, N-terminal domain CXB48_RS03805 PF02769 AIR synthase related protein, C-terminal domain CXB48_RS03810 PF04608 Phosphatidylglycerophosphatase A CXB48_RS03820 PF00925 GTP cyclohydrolase II CXB48_RS03830 PF01497 Periplasmic binding protein CXB48_RS03835 PF07715 TonB-dependent Receptor Plug Domain CXB48_RS03835 PF00593 TonB dependent receptor CXB48_RS03845 PF12320 Type 5 capsule protein repressor C-terminal domain CXB48_RS03845 PF00149 Calcineurin-like phosphoesterase CXB48_RS03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS03865 PF00072 Response regulator receiver domain CXB48_RS03865 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS03895 PF00849 RNA pseudouridylate synthase CXB48_RS03900 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CXB48_RS03900 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CXB48_RS03905 PF00156 Phosphoribosyl transferase domain CXB48_RS03910 PF02885 Glycosyl transferase family, helical bundle domain CXB48_RS03910 PF00591 Glycosyl transferase family, a/b domain CXB48_RS03910 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CXB48_RS03915 PF00106 short chain dehydrogenase CXB48_RS03925 PF02667 Short chain fatty acid transporter CXB48_RS03935 PF13404 AsnC-type helix-turn-helix domain CXB48_RS03935 PF01037 Lrp/AsnC ligand binding domain CXB48_RS03945 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CXB48_RS03945 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CXB48_RS03950 PF00209 Sodium:neurotransmitter symporter family CXB48_RS03955 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS03955 PF01610 Transposase CXB48_RS03955 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS03965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CXB48_RS03970 PF04209 homogentisate 1,2-dioxygenase CXB48_RS03980 PF02798 Glutathione S-transferase, N-terminal domain CXB48_RS03980 PF14497 Glutathione S-transferase, C-terminal domain CXB48_RS03985 PF00209 Sodium:neurotransmitter symporter family CXB48_RS03990 PF02743 Cache domain CXB48_RS03990 PF00672 HAMP domain CXB48_RS03990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS03995 PF01610 Transposase CXB48_RS03995 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS03995 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS04020 PF00270 DEAD/DEAH box helicase CXB48_RS04020 PF00271 Helicase conserved C-terminal domain CXB48_RS04030 PF01810 LysE type translocator CXB48_RS04040 PF00107 Zinc-binding dehydrogenase CXB48_RS04040 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS04045 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS04045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CXB48_RS04050 PF00850 Histone deacetylase domain CXB48_RS04070 PF04228 Putative neutral zinc metallopeptidase CXB48_RS04095 PF00072 Response regulator receiver domain CXB48_RS04095 PF00196 Bacterial regulatory proteins, luxR family CXB48_RS04100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS04100 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CXB48_RS04100 PF07730 Histidine kinase CXB48_RS04100 PF00672 HAMP domain CXB48_RS04105 PF07690 Major Facilitator Superfamily CXB48_RS04115 PF07690 Major Facilitator Superfamily CXB48_RS04120 PF14710 Respiratory nitrate reductase alpha N-terminal CXB48_RS04120 PF01568 Molydopterin dinucleotide binding domain CXB48_RS04120 PF00384 Molybdopterin oxidoreductase CXB48_RS04125 PF14711 Respiratory nitrate reductase beta C-terminal CXB48_RS04125 PF13247 4Fe-4S dicluster domain CXB48_RS04130 PF02613 Nitrate reductase delta subunit CXB48_RS04135 PF02665 Nitrate reductase gamma subunit CXB48_RS04140 PF09312 SurA N-terminal domain CXB48_RS04150 PF13411 MerR HTH family regulatory protein CXB48_RS04175 PF06778 Chlorite dismutase CXB48_RS04180 PF00034 Cytochrome c CXB48_RS04190 PF01568 Molydopterin dinucleotide binding domain CXB48_RS04190 PF00384 Molybdopterin oxidoreductase CXB48_RS04195 PF13247 4Fe-4S dicluster domain CXB48_RS04200 PF02613 Nitrate reductase delta subunit CXB48_RS04210 PF10609 NUBPL iron-transfer P-loop NTPase CXB48_RS04215 PF05598 Transposase domain (DUF772) CXB48_RS04215 PF01609 Transposase DDE domain CXB48_RS04225 PF04055 Radical SAM superfamily CXB48_RS04225 PF06463 Molybdenum Cofactor Synthesis C CXB48_RS04230 PF00994 Probable molybdopterin binding domain CXB48_RS04235 PF03453 MoeA N-terminal region (domain I and II) CXB48_RS04235 PF03454 MoeA C-terminal region (domain IV) CXB48_RS04235 PF00994 Probable molybdopterin binding domain CXB48_RS04240 PF01292 Prokaryotic cytochrome b561 CXB48_RS04245 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS04250 PF00072 Response regulator receiver domain CXB48_RS04250 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS04260 PF00106 short chain dehydrogenase CXB48_RS04270 PF00501 AMP-binding enzyme CXB48_RS04280 PF01610 Transposase CXB48_RS04280 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS04280 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS04290 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS04290 PF00072 Response regulator receiver domain CXB48_RS04295 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS04295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS04295 PF08521 Two-component sensor kinase N-terminal CXB48_RS04310 PF01219 Prokaryotic diacylglycerol kinase CXB48_RS04315 PF00884 Sulfatase CXB48_RS04320 PF05958 tRNA (Uracil-5-)-methyltransferase CXB48_RS04325 PF00860 Permease family CXB48_RS04330 PF01965 DJ-1/PfpI family CXB48_RS04335 PF02625 XdhC and CoxI family CXB48_RS04335 PF13478 XdhC Rossmann domain CXB48_RS04340 PF12804 MobA-like NTP transferase domain CXB48_RS04340 PF14602 Hexapeptide repeat of succinyl-transferase CXB48_RS04340 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS04345 PF00111 2Fe-2S iron-sulfur cluster binding domain CXB48_RS04345 PF01799 [2Fe-2S] binding domain CXB48_RS04350 PF03450 CO dehydrogenase flavoprotein C-terminal domain CXB48_RS04350 PF00941 FAD binding domain in molybdopterin dehydrogenase CXB48_RS04355 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CXB48_RS04355 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CXB48_RS04380 PF13411 MerR HTH family regulatory protein CXB48_RS04385 PF05175 Methyltransferase small domain CXB48_RS04390 PF00970 Oxidoreductase FAD-binding domain CXB48_RS04390 PF00175 Oxidoreductase NAD-binding domain CXB48_RS04395 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CXB48_RS04395 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CXB48_RS04400 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS04405 PF09345 Domain of unknown function (DUF1987) CXB48_RS04430 PF00005 ABC transporter CXB48_RS04430 PF12848 ABC transporter CXB48_RS04440 PF00464 Serine hydroxymethyltransferase CXB48_RS04450 PF07238 PilZ domain CXB48_RS04455 PF18073 Rubredoxin metal binding domain CXB48_RS04465 PF04325 Protein of unknown function (DUF465) CXB48_RS04470 PF01741 Large-conductance mechanosensitive channel, MscL CXB48_RS04475 PF00034 Cytochrome c CXB48_RS04475 PF03150 Di-haem cytochrome c peroxidase CXB48_RS04480 PF13654 AAA domain CXB48_RS04480 PF05362 Lon protease (S16) C-terminal proteolytic domain CXB48_RS04490 PF03350 Uncharacterized protein family, UPF0114 CXB48_RS04500 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CXB48_RS04510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CXB48_RS04510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CXB48_RS04520 PF00348 Polyprenyl synthetase CXB48_RS04525 PF00829 Ribosomal prokaryotic L21 protein CXB48_RS04530 PF01016 Ribosomal L27 protein CXB48_RS04535 PF01018 GTP1/OBG CXB48_RS04535 PF01926 50S ribosome-binding GTPase CXB48_RS04540 PF00696 Amino acid kinase family CXB48_RS04540 PF01472 PUA domain CXB48_RS04545 PF05981 CreA protein CXB48_RS04550 PF01649 Ribosomal protein S20 CXB48_RS04555 PF03023 Lipid II flippase MurJ CXB48_RS04560 PF06574 FAD synthetase CXB48_RS04560 PF01687 Riboflavin kinase CXB48_RS04565 PF08264 Anticodon-binding domain of tRNA CXB48_RS04565 PF00133 tRNA synthetases class I (I, L, M and V) CXB48_RS04565 PF06827 Zinc finger found in FPG and IleRS CXB48_RS04570 PF01252 Signal peptidase (SPase) II CXB48_RS04575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CXB48_RS04580 PF02401 LytB protein CXB48_RS04585 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CXB48_RS04585 PF07963 Prokaryotic N-terminal methylation motif CXB48_RS04590 PF05567 Neisseria PilC beta-propeller domain CXB48_RS04610 PF00114 Pilin (bacterial filament) CXB48_RS04610 PF07963 Prokaryotic N-terminal methylation motif CXB48_RS04615 PF14245 Type IV pilin PilA CXB48_RS04615 PF07963 Prokaryotic N-terminal methylation motif CXB48_RS04620 PF01266 FAD dependent oxidoreductase CXB48_RS04625 PF01253 Translation initiation factor SUI1 CXB48_RS04630 PF17944 Arginine decarboxylase C-terminal helical extension CXB48_RS04630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CXB48_RS04630 PF17810 Arginine decarboxylase helical bundle domain CXB48_RS04640 PF01554 MatE CXB48_RS04670 PF13847 Methyltransferase domain CXB48_RS04680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CXB48_RS04680 PF00356 Bacterial regulatory proteins, lacI family CXB48_RS04685 PF05524 PEP-utilising enzyme, N-terminal CXB48_RS04685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CXB48_RS04685 PF00391 PEP-utilising enzyme, mobile domain CXB48_RS04685 PF02896 PEP-utilising enzyme, TIM barrel domain CXB48_RS04685 PF00381 PTS HPr component phosphorylation site CXB48_RS04690 PF00294 pfkB family carbohydrate kinase CXB48_RS04695 PF02378 Phosphotransferase system, EIIC CXB48_RS04695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CXB48_RS04700 PF01011 PQQ enzyme repeat CXB48_RS04705 PF04480 Protein of unknown function (DUF559) CXB48_RS04710 PF03144 Elongation factor Tu domain 2 CXB48_RS04710 PF00009 Elongation factor Tu GTP binding domain CXB48_RS04710 PF16658 Class II release factor RF3, C-terminal domain CXB48_RS04715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CXB48_RS04715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CXB48_RS04725 PF13640 2OG-Fe(II) oxygenase superfamily CXB48_RS04725 PF18331 PKHD-type hydroxylase C-terminal domain CXB48_RS04730 PF07715 TonB-dependent Receptor Plug Domain CXB48_RS04730 PF00593 TonB dependent receptor CXB48_RS04735 PF00667 FAD binding domain CXB48_RS04735 PF00258 Flavodoxin CXB48_RS04735 PF00175 Oxidoreductase NAD-binding domain CXB48_RS04760 PF01609 Transposase DDE domain CXB48_RS04760 PF05598 Transposase domain (DUF772) CXB48_RS04775 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS04775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS04780 PF00072 Response regulator receiver domain CXB48_RS04780 PF02954 Bacterial regulatory protein, Fis family CXB48_RS04790 PF01476 LysM domain CXB48_RS04790 PF08525 Opacity-associated protein A N-terminal motif CXB48_RS04790 PF01551 Peptidase family M23 CXB48_RS04805 PF01699 Sodium/calcium exchanger protein CXB48_RS04810 PF01699 Sodium/calcium exchanger protein CXB48_RS04815 PF03330 Lytic transglycolase CXB48_RS04815 PF05036 Sporulation related domain CXB48_RS04820 PF02637 GatB domain CXB48_RS04820 PF02934 GatB/GatE catalytic domain CXB48_RS04825 PF01425 Amidase CXB48_RS04830 PF02686 Glu-tRNAGln amidotransferase C subunit CXB48_RS04840 PF04085 rod shape-determining protein MreC CXB48_RS04855 PF02545 Maf-like protein CXB48_RS04860 PF00575 S1 RNA binding domain CXB48_RS04860 PF10150 Ribonuclease E/G family CXB48_RS04870 PF00795 Carbon-nitrogen hydrolase CXB48_RS04875 PF01523 Putative modulator of DNA gyrase CXB48_RS04880 PF04751 Protein of unknown function (DUF615) CXB48_RS04885 PF01523 Putative modulator of DNA gyrase CXB48_RS04890 PF00381 PTS HPr component phosphorylation site CXB48_RS04895 PF03668 P-loop ATPase protein family CXB48_RS04900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CXB48_RS04905 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CXB48_RS04910 PF04552 Sigma-54, DNA binding domain CXB48_RS04910 PF04963 Sigma-54 factor, core binding domain CXB48_RS04910 PF00309 Sigma-54 factor, Activator interacting domain (AID) CXB48_RS04915 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXB48_RS04915 PF00005 ABC transporter CXB48_RS04935 PF00571 CBS domain CXB48_RS04935 PF01380 SIS domain CXB48_RS04940 PF00005 ABC transporter CXB48_RS04945 PF02405 Permease MlaE CXB48_RS04950 PF02470 MlaD protein CXB48_RS04955 PF05494 MlaC protein CXB48_RS04965 PF06146 Phosphate-starvation-inducible E CXB48_RS04975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CXB48_RS04980 PF01634 ATP phosphoribosyltransferase CXB48_RS04985 PF00815 Histidinol dehydrogenase CXB48_RS04990 PF00155 Aminotransferase class I and II CXB48_RS04995 PF13180 PDZ domain CXB48_RS05000 PF01784 NIF3 (NGG1p interacting factor 3) CXB48_RS05005 PF01507 Phosphoadenosine phosphosulfate reductase family CXB48_RS05010 PF00009 Elongation factor Tu GTP binding domain CXB48_RS05015 PF00005 ABC transporter CXB48_RS05035 PF00114 Pilin (bacterial filament) CXB48_RS05035 PF07963 Prokaryotic N-terminal methylation motif CXB48_RS05040 PF00437 Type II/IV secretion system protein CXB48_RS05040 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CXB48_RS05045 PF00482 Type II secretion system (T2SS), protein F CXB48_RS05050 PF06750 Bacterial Peptidase A24 N-terminal domain CXB48_RS05050 PF01478 Type IV leader peptidase family CXB48_RS05055 PF01121 Dephospho-CoA kinase CXB48_RS05060 PF03884 DNA gyrase inhibitor YacG CXB48_RS05070 PF00248 Aldo/keto reductase family CXB48_RS05075 PF00572 Ribosomal protein L13 CXB48_RS05080 PF00380 Ribosomal protein S9/S16 CXB48_RS05085 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CXB48_RS05085 PF00355 Rieske [2Fe-2S] domain CXB48_RS05090 PF00032 Cytochrome b(C-terminal)/b6/petD CXB48_RS05090 PF00033 Cytochrome b/b6/petB CXB48_RS05095 PF02167 Cytochrome C1 family CXB48_RS05100 PF00043 Glutathione S-transferase, C-terminal domain CXB48_RS05100 PF02798 Glutathione S-transferase, N-terminal domain CXB48_RS05105 PF04386 Stringent starvation protein B CXB48_RS05110 PF04972 BON domain CXB48_RS05115 PF13580 SIS domain CXB48_RS05120 PF02021 Uncharacterised protein family UPF0102 CXB48_RS05125 PF04348 LppC putative lipoprotein CXB48_RS05130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CXB48_RS05140 PF02381 MraZ protein, putative antitoxin-like CXB48_RS05145 PF01795 MraW methylase family CXB48_RS05150 PF04999 Cell division protein FtsL CXB48_RS05155 PF00905 Penicillin binding protein transpeptidase domain CXB48_RS05155 PF03717 Penicillin-binding Protein dimerisation domain CXB48_RS05160 PF01225 Mur ligase family, catalytic domain CXB48_RS05160 PF08245 Mur ligase middle domain CXB48_RS05160 PF02875 Mur ligase family, glutamate ligase domain CXB48_RS05165 PF08245 Mur ligase middle domain CXB48_RS05165 PF02875 Mur ligase family, glutamate ligase domain CXB48_RS05165 PF01225 Mur ligase family, catalytic domain CXB48_RS05170 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CXB48_RS05170 PF00953 Glycosyl transferase family 4 CXB48_RS05175 PF02875 Mur ligase family, glutamate ligase domain CXB48_RS05175 PF08245 Mur ligase middle domain CXB48_RS05180 PF01098 Cell cycle protein CXB48_RS05185 PF04101 Glycosyltransferase family 28 C-terminal domain CXB48_RS05185 PF03033 Glycosyltransferase family 28 N-terminal domain CXB48_RS05190 PF01225 Mur ligase family, catalytic domain CXB48_RS05190 PF02875 Mur ligase family, glutamate ligase domain CXB48_RS05190 PF08245 Mur ligase middle domain CXB48_RS05195 PF07478 D-ala D-ala ligase C-terminus CXB48_RS05195 PF01820 D-ala D-ala ligase N-terminus CXB48_RS05200 PF03799 Cell division protein FtsQ CXB48_RS05200 PF08478 POTRA domain, FtsQ-type CXB48_RS05205 PF02491 SHS2 domain inserted in FTSA CXB48_RS05210 PF00091 Tubulin/FtsZ family, GTPase domain CXB48_RS05210 PF12327 FtsZ family, C-terminal domain CXB48_RS05215 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CXB48_RS05220 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS05220 PF01610 Transposase CXB48_RS05220 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS05230 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS05230 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS05230 PF01610 Transposase CXB48_RS05250 PF07995 Glucose / Sorbosone dehydrogenase CXB48_RS05255 PF02308 MgtC family CXB48_RS05275 PF03641 Possible lysine decarboxylase CXB48_RS05280 PF00106 short chain dehydrogenase CXB48_RS05285 PF00916 Sulfate permease family CXB48_RS05285 PF01740 STAS domain CXB48_RS05295 PF06039 Malate:quinone oxidoreductase (Mqo) CXB48_RS05305 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CXB48_RS05320 PF07044 Protein of unknown function (DUF1329) CXB48_RS05350 PF02743 Cache domain CXB48_RS05350 PF00672 HAMP domain CXB48_RS05350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS05355 PF01435 Peptidase family M48 CXB48_RS05365 PF01169 Uncharacterized protein family UPF0016 CXB48_RS05370 PF05175 Methyltransferase small domain CXB48_RS05370 PF08468 Methyltransferase small domain N-terminal CXB48_RS05375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CXB48_RS05375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXB48_RS05380 PF01810 LysE type translocator CXB48_RS05385 PF00501 AMP-binding enzyme CXB48_RS05385 PF13193 AMP-binding enzyme C-terminal domain CXB48_RS05390 PF13426 PAS domain CXB48_RS05390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS05390 PF00072 Response regulator receiver domain CXB48_RS05395 PF00753 Metallo-beta-lactamase superfamily CXB48_RS05400 PF00691 OmpA family CXB48_RS05400 PF13488 Glycine zipper CXB48_RS05405 PF00072 Response regulator receiver domain CXB48_RS05405 PF09308 LuxQ, periplasmic CXB48_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS05405 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS05415 PF01553 Acyltransferase CXB48_RS05420 PF07085 DRTGG domain CXB48_RS05420 PF01515 Phosphate acetyl/butaryl transferase CXB48_RS05425 PF00871 Acetokinase family CXB48_RS05430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CXB48_RS05435 PF00255 Glutathione peroxidase CXB48_RS05440 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS05440 PF16925 Tetracyclin repressor-like, C-terminal domain CXB48_RS05445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CXB48_RS05445 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS05465 PF02152 Dihydroneopterin aldolase CXB48_RS05480 PF00258 Flavodoxin CXB48_RS05485 PF00596 Class II Aldolase and Adducin N-terminal domain CXB48_RS05510 PF13091 PLD-like domain CXB48_RS05510 PF13396 Phospholipase_D-nuclease N-terminal CXB48_RS05515 PF01965 DJ-1/PfpI family CXB48_RS05520 PF09905 DNA-binding protein VF530 CXB48_RS05525 PF05683 Fumarase C-terminus CXB48_RS05525 PF05681 Fumarate hydratase (Fumerase) CXB48_RS05530 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS05535 PF00970 Oxidoreductase FAD-binding domain CXB48_RS05535 PF00175 Oxidoreductase NAD-binding domain CXB48_RS05540 PF02887 Pyruvate kinase, alpha/beta domain CXB48_RS05540 PF00224 Pyruvate kinase, barrel domain CXB48_RS05565 PF07726 ATPase family associated with various cellular activities (AAA) CXB48_RS05565 PF17863 AAA lid domain CXB48_RS05590 PF08411 Exonuclease C-terminal CXB48_RS05590 PF00929 Exonuclease CXB48_RS05600 PF00551 Formyl transferase CXB48_RS05600 PF01842 ACT domain CXB48_RS05610 PF05872 Bacterial protein of unknown function (DUF853) CXB48_RS05620 PF00483 Nucleotidyl transferase CXB48_RS05620 PF01050 Mannose-6-phosphate isomerase CXB48_RS05625 PF03883 Peroxide stress protein YaaA CXB48_RS05630 PF16916 Dimerisation domain of Zinc Transporter CXB48_RS05630 PF01545 Cation efflux family CXB48_RS05635 PF13638 PIN domain CXB48_RS05635 PF02562 PhoH-like protein CXB48_RS05640 PF01967 MoaC family CXB48_RS05645 PF02597 ThiS family CXB48_RS05650 PF02391 MoaE protein CXB48_RS05655 PF00270 DEAD/DEAH box helicase CXB48_RS05655 PF00271 Helicase conserved C-terminal domain CXB48_RS05660 PF02230 Phospholipase/Carboxylesterase CXB48_RS05665 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXB48_RS05670 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS05680 PF00005 ABC transporter CXB48_RS05685 PF02769 AIR synthase related protein, C-terminal domain CXB48_RS05685 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CXB48_RS05685 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CXB48_RS05690 PF01784 NIF3 (NGG1p interacting factor 3) CXB48_RS05695 PF03734 L,D-transpeptidase catalytic domain CXB48_RS05700 PF00293 NUDIX domain CXB48_RS05700 PF09297 NADH pyrophosphatase zinc ribbon domain CXB48_RS05705 PF00293 NUDIX domain CXB48_RS05710 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS05720 PF02222 ATP-grasp domain CXB48_RS05720 PF01370 NAD dependent epimerase/dehydratase family CXB48_RS05725 PF03471 Transporter associated domain CXB48_RS05725 PF00571 CBS domain CXB48_RS05725 PF01595 Cyclin M transmembrane N-terminal domain CXB48_RS05730 PF01578 Cytochrome C assembly protein CXB48_RS05735 PF02978 Signal peptide binding domain CXB48_RS05735 PF02881 SRP54-type protein, helical bundle domain CXB48_RS05735 PF00448 SRP54-type protein, GTPase domain CXB48_RS05740 PF00886 Ribosomal protein S16 CXB48_RS05745 PF01782 RimM N-terminal domain CXB48_RS05745 PF05239 PRC-barrel domain CXB48_RS05750 PF01746 tRNA (Guanine-1)-methyltransferase CXB48_RS05755 PF01245 Ribosomal protein L19 CXB48_RS05760 PF02899 Phage integrase, N-terminal SAM-like domain CXB48_RS05760 PF00589 Phage integrase family CXB48_RS05765 PF10411 Disulfide bond isomerase protein N-terminus CXB48_RS05765 PF13098 Thioredoxin-like domain CXB48_RS05770 PF04828 Glutathione-dependent formaldehyde-activating enzyme CXB48_RS05775 PF01842 ACT domain CXB48_RS05775 PF00742 Homoserine dehydrogenase CXB48_RS05775 PF03447 Homoserine dehydrogenase, NAD binding domain CXB48_RS05780 PF14821 Threonine synthase N terminus CXB48_RS05780 PF00291 Pyridoxal-phosphate dependent enzyme CXB48_RS05785 PF00929 Exonuclease CXB48_RS05790 PF01979 Amidohydrolase family CXB48_RS05800 PF00764 Arginosuccinate synthase CXB48_RS05805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CXB48_RS05815 PF00633 Helix-hairpin-helix motif CXB48_RS05815 PF00730 HhH-GPD superfamily base excision DNA repair protein CXB48_RS05815 PF10576 Iron-sulfur binding domain of endonuclease III CXB48_RS05820 PF02508 Rnf-Nqr subunit, membrane protein CXB48_RS05825 PF04205 FMN-binding domain CXB48_RS05830 PF03116 NQR2, RnfD, RnfE family CXB48_RS05835 PF12838 4Fe-4S dicluster domain CXB48_RS05835 PF10531 SLBB domain CXB48_RS05835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CXB48_RS05835 PF13375 RnfC Barrel sandwich hybrid domain CXB48_RS05840 PF04060 Putative Fe-S cluster CXB48_RS05845 PF02508 Rnf-Nqr subunit, membrane protein CXB48_RS05860 PF00378 Enoyl-CoA hydratase/isomerase CXB48_RS05865 PF13458 Periplasmic binding protein CXB48_RS05870 PF03167 Uracil DNA glycosylase superfamily CXB48_RS05885 PF01571 Aminomethyltransferase folate-binding domain CXB48_RS05890 PF03937 Flavinator of succinate dehydrogenase CXB48_RS05900 PF00890 FAD binding domain CXB48_RS05900 PF02910 Fumarate reductase flavoprotein C-term CXB48_RS05905 PF04542 Sigma-70 region 2 CXB48_RS05905 PF08281 Sigma-70, region 4 CXB48_RS05910 PF03873 Anti sigma-E protein RseA, C-terminal domain CXB48_RS05910 PF03872 Anti sigma-E protein RseA, N-terminal domain CXB48_RS05915 PF17188 MucB/RseB C-terminal domain CXB48_RS05915 PF03888 MucB/RseB N-terminal domain CXB48_RS05925 PF13180 PDZ domain CXB48_RS05930 PF00009 Elongation factor Tu GTP binding domain CXB48_RS05930 PF06421 GTP-binding protein LepA C-terminus CXB48_RS05930 PF00679 Elongation factor G C-terminus CXB48_RS05930 PF03144 Elongation factor Tu domain 2 CXB48_RS05935 PF10502 Signal peptidase, peptidase S26 CXB48_RS05945 PF00035 Double-stranded RNA binding motif CXB48_RS05945 PF14622 Ribonuclease-III-like CXB48_RS05950 PF07650 KH domain CXB48_RS05950 PF01926 50S ribosome-binding GTPase CXB48_RS05955 PF11967 Recombination protein O N terminal CXB48_RS05955 PF02565 Recombination protein O C terminal CXB48_RS05960 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CXB48_RS05970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS05970 PF03466 LysR substrate binding domain CXB48_RS05980 PF08003 Protein of unknown function (DUF1698) CXB48_RS05985 PF13649 Methyltransferase domain CXB48_RS05995 PF05362 Lon protease (S16) C-terminal proteolytic domain CXB48_RS05995 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS05995 PF02190 ATP-dependent protease La (LON) substrate-binding domain CXB48_RS06000 PF12833 Helix-turn-helix domain CXB48_RS06005 PF00171 Aldehyde dehydrogenase family CXB48_RS06005 PF14850 DNA-binding domain of Proline dehydrogenase CXB48_RS06005 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CXB48_RS06005 PF01619 Proline dehydrogenase CXB48_RS06010 PF00474 Sodium:solute symporter family CXB48_RS06020 PF00593 TonB dependent receptor CXB48_RS06020 PF07715 TonB-dependent Receptor Plug Domain CXB48_RS06025 PF00474 Sodium:solute symporter family CXB48_RS06035 PF03466 LysR substrate binding domain CXB48_RS06035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS06040 PF00775 Dioxygenase CXB48_RS06040 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CXB48_RS06045 PF00775 Dioxygenase CXB48_RS06050 PF03969 AFG1-like ATPase CXB48_RS06055 PF03547 Membrane transport protein CXB48_RS06060 PF01614 Bacterial transcriptional regulator CXB48_RS06060 PF09339 IclR helix-turn-helix domain CXB48_RS06065 PF01144 Coenzyme A transferase CXB48_RS06070 PF01144 Coenzyme A transferase CXB48_RS06075 PF00108 Thiolase, N-terminal domain CXB48_RS06075 PF02803 Thiolase, C-terminal domain CXB48_RS06080 PF00206 Lyase CXB48_RS06080 PF10397 Adenylosuccinate lyase C-terminus CXB48_RS06085 PF12146 Serine aminopeptidase, S33 CXB48_RS06090 PF02627 Carboxymuconolactone decarboxylase family CXB48_RS06100 PF01479 S4 domain CXB48_RS06100 PF00849 RNA pseudouridylate synthase CXB48_RS06110 PF01588 Putative tRNA binding domain CXB48_RS06110 PF09334 tRNA synthetases class I (M) CXB48_RS06115 PF10609 NUBPL iron-transfer P-loop NTPase CXB48_RS06120 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CXB48_RS06125 PF00313 'Cold-shock' DNA-binding domain CXB48_RS06130 PF00692 dUTPase CXB48_RS06135 PF03264 NapC/NirT cytochrome c family, N-terminal region CXB48_RS06140 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CXB48_RS06145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CXB48_RS06145 PF00384 Molybdopterin oxidoreductase CXB48_RS06145 PF01568 Molydopterin dinucleotide binding domain CXB48_RS06155 PF06796 Periplasmic nitrate reductase protein NapE CXB48_RS06160 PF07690 Major Facilitator Superfamily CXB48_RS06165 PF10263 SprT-like family CXB48_RS06165 PF17283 SprT-like zinc ribbon domain CXB48_RS06175 PF04893 Yip1 domain CXB48_RS06185 PF01171 PP-loop family CXB48_RS06190 PF00793 DAHP synthetase I family CXB48_RS06195 PF03352 Methyladenine glycosylase CXB48_RS06215 PF01654 Cytochrome bd terminal oxidase subunit I CXB48_RS06225 PF08173 Membrane bound YbgT-like protein CXB48_RS06235 PF02146 Sir2 family CXB48_RS06240 PF00877 NlpC/P60 family CXB48_RS06245 PF00877 NlpC/P60 family CXB48_RS06270 PF12557 Cob(I)alamin adenosyltransferase N terminal CXB48_RS06270 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CXB48_RS06275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CXB48_RS06275 PF07685 CobB/CobQ-like glutamine amidotransferase domain CXB48_RS06280 PF00881 Nitroreductase family CXB48_RS06290 PF17113 Regulatory signalling modulator protein AmpE CXB48_RS06290 PF03186 CobD/Cbib protein CXB48_RS06295 PF00155 Aminotransferase class I and II CXB48_RS06300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CXB48_RS06300 PF07685 CobB/CobQ-like glutamine amidotransferase domain CXB48_RS06305 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CXB48_RS06310 PF02277 Phosphoribosyltransferase CXB48_RS06320 PF02654 Cobalamin-5-phosphate synthase CXB48_RS06325 PF00462 Glutaredoxin CXB48_RS06330 PF00581 Rhodanese-like domain CXB48_RS06335 PF04891 NifQ CXB48_RS06345 PF12838 4Fe-4S dicluster domain CXB48_RS06350 PF04055 Radical SAM superfamily CXB48_RS06350 PF02579 Dinitrogenase iron-molybdenum cofactor CXB48_RS06365 PF03466 LysR substrate binding domain CXB48_RS06365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS06370 PF01042 Endoribonuclease L-PSP CXB48_RS06380 PF07690 Major Facilitator Superfamily CXB48_RS06385 PF02954 Bacterial regulatory protein, Fis family CXB48_RS06385 PF13185 GAF domain CXB48_RS06385 PF00158 Sigma-54 interaction domain CXB48_RS06390 PF00989 PAS fold CXB48_RS06390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS06395 PF02508 Rnf-Nqr subunit, membrane protein CXB48_RS06400 PF04060 Putative Fe-S cluster CXB48_RS06405 PF13375 RnfC Barrel sandwich hybrid domain CXB48_RS06405 PF13237 4Fe-4S dicluster domain CXB48_RS06405 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CXB48_RS06405 PF10531 SLBB domain CXB48_RS06410 PF03116 NQR2, RnfD, RnfE family CXB48_RS06415 PF04205 FMN-binding domain CXB48_RS06420 PF02508 Rnf-Nqr subunit, membrane protein CXB48_RS06425 PF03658 RnfH family Ubiquitin CXB48_RS06430 PF02579 Dinitrogenase iron-molybdenum cofactor CXB48_RS06430 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal CXB48_RS06450 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CXB48_RS06455 PF00148 Nitrogenase component 1 type Oxidoreductase CXB48_RS06460 PF11844 Domain of unknown function (DUF3364) CXB48_RS06460 PF00148 Nitrogenase component 1 type Oxidoreductase CXB48_RS06465 PF06988 NifT/FixU protein CXB48_RS06470 PF02579 Dinitrogenase iron-molybdenum cofactor CXB48_RS06470 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal CXB48_RS06485 PF00148 Nitrogenase component 1 type Oxidoreductase CXB48_RS06490 PF00148 Nitrogenase component 1 type Oxidoreductase CXB48_RS06495 PF02579 Dinitrogenase iron-molybdenum cofactor CXB48_RS06500 PF03270 Protein of unknown function, DUF269 CXB48_RS06510 PF12838 4Fe-4S dicluster domain CXB48_RS06545 PF00005 ABC transporter CXB48_RS06545 PF03459 TOBE domain CXB48_RS06550 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS06560 PF03459 TOBE domain CXB48_RS06560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS06565 PF01521 Iron-sulphur cluster biosynthesis CXB48_RS06570 PF04324 BFD-like [2Fe-2S] binding domain CXB48_RS06570 PF01592 NifU-like N terminal domain CXB48_RS06570 PF01106 NifU-like domain CXB48_RS06575 PF00266 Aminotransferase class-V CXB48_RS06580 PF00682 HMGL-like CXB48_RS06585 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS06595 PF03206 Nitrogen fixation protein NifW CXB48_RS06600 PF04319 NifZ domain CXB48_RS06610 PF07724 AAA domain (Cdc48 subfamily) CXB48_RS06610 PF06689 ClpX C4-type zinc finger CXB48_RS06610 PF10431 C-terminal, D2-small domain, of ClpB protein CXB48_RS06615 PF00258 Flavodoxin CXB48_RS06620 PF00255 Glutathione peroxidase CXB48_RS06625 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CXB48_RS06630 PF00581 Rhodanese-like domain CXB48_RS06635 PF01612 3'-5' exonuclease CXB48_RS06635 PF00570 HRDC domain CXB48_RS06640 PF05166 YcgL domain CXB48_RS06650 PF03692 Putative zinc- or iron-chelating domain CXB48_RS06660 PF01212 Beta-eliminating lyase CXB48_RS06665 PF01411 tRNA synthetases class II (A) CXB48_RS06665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CXB48_RS06665 PF02272 DHHA1 domain CXB48_RS06670 PF13840 ACT domain CXB48_RS06670 PF01842 ACT domain CXB48_RS06670 PF00696 Amino acid kinase family CXB48_RS06675 PF02599 Global regulator protein family CXB48_RS06700 PF03448 MgtE intracellular N domain CXB48_RS06700 PF01769 Divalent cation transporter CXB48_RS06700 PF00571 CBS domain CXB48_RS06705 PF04277 Oxaloacetate decarboxylase, gamma chain CXB48_RS06710 PF02436 Conserved carboxylase domain CXB48_RS06710 PF00682 HMGL-like CXB48_RS06710 PF00364 Biotin-requiring enzyme CXB48_RS06715 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CXB48_RS06720 PF03869 Arc-like DNA binding domain CXB48_RS06745 PF07238 PilZ domain CXB48_RS06745 PF07317 Flagellar regulator YcgR CXB48_RS06765 PF00072 Response regulator receiver domain CXB48_RS06765 PF01584 CheW-like domain CXB48_RS06770 PF01739 CheR methyltransferase, SAM binding domain CXB48_RS06770 PF03705 CheR methyltransferase, all-alpha domain CXB48_RS06775 PF00460 Flagella basal body rod protein CXB48_RS06780 PF00460 Flagella basal body rod protein CXB48_RS06780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CXB48_RS06785 PF13861 FlgD Tudor-like domain CXB48_RS06785 PF03963 Flagellar hook capping protein - N-terminal region CXB48_RS06785 PF13860 FlgD Ig-like domain CXB48_RS06790 PF07559 Flagellar basal body protein FlaE CXB48_RS06790 PF00460 Flagella basal body rod protein CXB48_RS06790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CXB48_RS06795 PF00460 Flagella basal body rod protein CXB48_RS06795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CXB48_RS06800 PF00460 Flagella basal body rod protein CXB48_RS06800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CXB48_RS06805 PF02107 Flagellar L-ring protein CXB48_RS06810 PF02119 Flagellar P-ring protein CXB48_RS06815 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CXB48_RS06815 PF10135 Rod binding protein CXB48_RS06820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CXB48_RS06820 PF00460 Flagella basal body rod protein CXB48_RS06825 PF00700 Bacterial flagellin C-terminal helical region CXB48_RS06825 PF00460 Flagella basal body rod protein CXB48_RS06825 PF00669 Bacterial flagellin N-terminal helical region CXB48_RS06855 PF00563 EAL domain CXB48_RS06855 PF05231 MASE1 CXB48_RS06860 PF03572 Peptidase family S41 CXB48_RS06860 PF11818 C-terminal domain of tail specific protease (DUF3340) CXB48_RS06860 PF00595 PDZ domain CXB48_RS06860 PF17804 Tail specific protease N-terminal domain CXB48_RS06865 PF14765 Polyketide synthase dehydratase CXB48_RS06865 PF00550 Phosphopantetheine attachment site CXB48_RS06865 PF08659 KR domain CXB48_RS06865 PF02801 Beta-ketoacyl synthase, C-terminal domain CXB48_RS06865 PF16197 Ketoacyl-synthetase C-terminal extension CXB48_RS06865 PF09277 Erythronolide synthase, docking CXB48_RS06865 PF08990 Erythronolide synthase docking CXB48_RS06865 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS06865 PF00698 Acyl transferase domain CXB48_RS06865 PF00109 Beta-ketoacyl synthase, N-terminal domain CXB48_RS06870 PF02127 Aminopeptidase I zinc metalloprotease (M18) CXB48_RS06880 PF00849 RNA pseudouridylate synthase CXB48_RS06885 PF03776 Septum formation topological specificity factor MinE CXB48_RS06890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CXB48_RS06895 PF05209 Septum formation inhibitor MinC, N-terminal domain CXB48_RS06895 PF03775 Septum formation inhibitor MinC, C-terminal domain CXB48_RS06900 PF03279 Bacterial lipid A biosynthesis acyltransferase CXB48_RS06905 PF02678 Pirin CXB48_RS06905 PF05726 Pirin C-terminal cupin domain CXB48_RS06910 PF04333 MlaA lipoprotein CXB48_RS06925 PF04341 Protein of unknown function, DUF485 CXB48_RS06930 PF00474 Sodium:solute symporter family CXB48_RS06935 PF00561 alpha/beta hydrolase fold CXB48_RS06935 PF00106 short chain dehydrogenase CXB48_RS06950 PF06794 Uncharacterised protein family (UPF0270) CXB48_RS06955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CXB48_RS06955 PF00672 HAMP domain CXB48_RS06955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS06955 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS06955 PF01627 Hpt domain CXB48_RS06955 PF00072 Response regulator receiver domain CXB48_RS06960 PF05343 M42 glutamyl aminopeptidase CXB48_RS06965 PF08443 RimK-like ATP-grasp domain CXB48_RS06965 PF02875 Mur ligase family, glutamate ligase domain CXB48_RS06965 PF08245 Mur ligase middle domain CXB48_RS06970 PF13537 Glutamine amidotransferase domain CXB48_RS06970 PF00733 Asparagine synthase CXB48_RS06980 PF01483 Proprotein convertase P-domain CXB48_RS06980 PF00082 Subtilase family CXB48_RS06990 PF03781 Sulfatase-modifying factor enzyme 1 CXB48_RS06990 PF12867 DinB superfamily CXB48_RS07000 PF00106 short chain dehydrogenase CXB48_RS07010 PF00270 DEAD/DEAH box helicase CXB48_RS07010 PF00271 Helicase conserved C-terminal domain CXB48_RS07010 PF08494 DEAD/H associated CXB48_RS07045 PF07995 Glucose / Sorbosone dehydrogenase CXB48_RS07050 PF01011 PQQ enzyme repeat CXB48_RS07055 PF17783 CvfB-like winged helix domain CXB48_RS07055 PF13509 S1 domain CXB48_RS07070 PF00150 Cellulase (glycosyl hydrolase family 5) CXB48_RS07105 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CXB48_RS07105 PF08463 EcoEI R protein C-terminal CXB48_RS07105 PF04851 Type III restriction enzyme, res subunit CXB48_RS07105 PF00271 Helicase conserved C-terminal domain CXB48_RS07115 PF12161 HsdM N-terminal domain CXB48_RS07115 PF02384 N-6 DNA Methylase CXB48_RS07125 PF01420 Type I restriction modification DNA specificity domain CXB48_RS07155 PF12419 SNF2 Helicase protein CXB48_RS07155 PF00176 SNF2 family N-terminal domain CXB48_RS07155 PF00271 Helicase conserved C-terminal domain CXB48_RS07210 PF00589 Phage integrase family CXB48_RS07210 PF14659 Phage integrase, N-terminal SAM-like domain CXB48_RS07210 PF13356 Arm DNA-binding domain CXB48_RS07215 PF07690 Major Facilitator Superfamily CXB48_RS07225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS07225 PF00072 Response regulator receiver domain CXB48_RS07225 PF07495 Y_Y_Y domain CXB48_RS07225 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS07225 PF07494 Two component regulator propeller CXB48_RS07225 PF12833 Helix-turn-helix domain CXB48_RS07230 PF01494 FAD binding domain CXB48_RS07235 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS07235 PF00072 Response regulator receiver domain CXB48_RS07255 PF03631 Virulence factor BrkB CXB48_RS07260 PF13579 Glycosyl transferase 4-like domain CXB48_RS07260 PF00534 Glycosyl transferases group 1 CXB48_RS07280 PF11953 Domain of unknown function (DUF3470) CXB48_RS07280 PF00037 4Fe-4S binding domain CXB48_RS07285 PF01624 MutS domain I CXB48_RS07285 PF05188 MutS domain II CXB48_RS07285 PF05192 MutS domain III CXB48_RS07285 PF00488 MutS domain V CXB48_RS07285 PF05190 MutS family domain IV CXB48_RS07295 PF02464 Competence-damaged protein CXB48_RS07300 PF00154 recA bacterial DNA recombination protein CXB48_RS07305 PF02631 RecX family CXB48_RS07315 PF10996 Beta-Casp domain CXB48_RS07315 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CXB48_RS07315 PF00753 Metallo-beta-lactamase superfamily CXB48_RS07320 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CXB48_RS07320 PF09364 XFP N-terminal domain CXB48_RS07320 PF09363 XFP C-terminal domain CXB48_RS07330 PF03942 DTW domain CXB48_RS07335 PF00892 EamA-like transporter family CXB48_RS07340 PF00196 Bacterial regulatory proteins, luxR family CXB48_RS07340 PF00072 Response regulator receiver domain CXB48_RS07345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS07345 PF03466 LysR substrate binding domain CXB48_RS07350 PF00175 Oxidoreductase NAD-binding domain CXB48_RS07350 PF00970 Oxidoreductase FAD-binding domain CXB48_RS07355 PF02810 SEC-C motif CXB48_RS07365 PF00691 OmpA family CXB48_RS07365 PF05736 OprF membrane domain CXB48_RS07375 PF06733 DEAD_2 CXB48_RS07375 PF13307 Helicase C-terminal domain CXB48_RS07380 PF00144 Beta-lactamase CXB48_RS07385 PF04972 BON domain CXB48_RS07385 PF00691 OmpA family CXB48_RS07390 PF01243 Pyridoxamine 5'-phosphate oxidase CXB48_RS07390 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CXB48_RS07405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CXB48_RS07405 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CXB48_RS07405 PF00361 Proton-conducting membrane transporter CXB48_RS07405 PF13244 Domain of unknown function (DUF4040) CXB48_RS07410 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CXB48_RS07415 PF00361 Proton-conducting membrane transporter CXB48_RS07420 PF01899 Na+/H+ ion antiporter subunit CXB48_RS07425 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CXB48_RS07430 PF03334 Na+/H+ antiporter subunit CXB48_RS07435 PF08335 GlnD PII-uridylyltransferase CXB48_RS07435 PF01842 ACT domain CXB48_RS07435 PF01909 Nucleotidyltransferase domain CXB48_RS07435 PF01966 HD domain CXB48_RS07440 PF00557 Metallopeptidase family M24 CXB48_RS07445 PF00318 Ribosomal protein S2 CXB48_RS07450 PF00889 Elongation factor TS CXB48_RS07455 PF00696 Amino acid kinase family CXB48_RS07460 PF01765 Ribosome recycling factor CXB48_RS07465 PF01255 Putative undecaprenyl diphosphate synthase CXB48_RS07475 PF13288 DXP reductoisomerase C-terminal domain CXB48_RS07475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CXB48_RS07475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CXB48_RS07480 PF17820 PDZ domain CXB48_RS07480 PF13180 PDZ domain CXB48_RS07480 PF02163 Peptidase family M50 CXB48_RS07485 PF01103 Surface antigen CXB48_RS07485 PF07244 Surface antigen variable number repeat CXB48_RS07490 PF03938 Outer membrane protein (OmpH-like) CXB48_RS07495 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CXB48_RS07495 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS07500 PF07977 FabA-like domain CXB48_RS07505 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS07505 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CXB48_RS07510 PF02684 Lipid-A-disaccharide synthetase CXB48_RS07515 PF01351 Ribonuclease HII CXB48_RS07520 PF02811 PHP domain CXB48_RS07520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CXB48_RS07520 PF01336 OB-fold nucleic acid binding domain CXB48_RS07520 PF14579 Helix-hairpin-helix motif CXB48_RS07520 PF07733 Bacterial DNA polymerase III alpha NTPase domain CXB48_RS07525 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CXB48_RS07530 PF09179 TilS substrate binding domain CXB48_RS07530 PF11734 TilS substrate C-terminal domain CXB48_RS07530 PF01171 PP-loop family CXB48_RS07535 PF06418 CTP synthase N-terminus CXB48_RS07535 PF00117 Glutamine amidotransferase class-I CXB48_RS07540 PF00793 DAHP synthetase I family CXB48_RS07545 PF00113 Enolase, C-terminal TIM barrel domain CXB48_RS07545 PF03952 Enolase, N-terminal domain CXB48_RS07550 PF04977 Septum formation initiator CXB48_RS07555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CXB48_RS07570 PF03466 LysR substrate binding domain CXB48_RS07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS07575 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS07575 PF00107 Zinc-binding dehydrogenase CXB48_RS07580 PF00756 Putative esterase CXB48_RS07585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CXB48_RS07595 PF02542 YgbB family CXB48_RS07600 PF01142 tRNA pseudouridine synthase D (TruD) CXB48_RS07605 PF01975 Survival protein SurE CXB48_RS07620 PF01476 LysM domain CXB48_RS07620 PF01551 Peptidase family M23 CXB48_RS07625 PF04542 Sigma-70 region 2 CXB48_RS07625 PF00140 Sigma-70 factor, region 1.2 CXB48_RS07625 PF04545 Sigma-70, region 4 CXB48_RS07625 PF04539 Sigma-70 region 3 CXB48_RS07635 PF00474 Sodium:solute symporter family CXB48_RS07650 PF01725 Ham1 family CXB48_RS07660 PF00582 Universal stress protein family CXB48_RS07665 PF01844 HNH endonuclease CXB48_RS07670 PF01709 Transcriptional regulator CXB48_RS07675 PF00892 EamA-like transporter family CXB48_RS07680 PF03475 3-alpha domain CXB48_RS07680 PF03473 MOSC domain CXB48_RS07690 PF13286 Phosphohydrolase-associated domain CXB48_RS07690 PF01966 HD domain CXB48_RS07695 PF00909 Ammonium Transporter Family CXB48_RS07700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXB48_RS07715 PF00459 Inositol monophosphatase family CXB48_RS07740 PF00672 HAMP domain CXB48_RS07740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS07745 PF05698 Bacterial trigger factor protein (TF) C-terminus CXB48_RS07750 PF12849 PBP superfamily domain CXB48_RS07760 PF02690 Na+/Pi-cotransporter CXB48_RS07765 PF01266 FAD dependent oxidoreductase CXB48_RS07765 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CXB48_RS07770 PF08220 DeoR-like helix-turn-helix domain CXB48_RS07770 PF00455 DeoR C terminal sensor domain CXB48_RS07775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CXB48_RS07775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CXB48_RS07780 PF00230 Major intrinsic protein CXB48_RS07790 PF00271 Helicase conserved C-terminal domain CXB48_RS07790 PF03880 DbpA RNA binding domain CXB48_RS07790 PF00270 DEAD/DEAH box helicase CXB48_RS07795 PF07885 Ion channel CXB48_RS07810 PF01136 Peptidase family U32 CXB48_RS07810 PF12392 Collagenase CXB48_RS07815 PF13411 MerR HTH family regulatory protein CXB48_RS07840 PF09278 MerR, DNA binding CXB48_RS07840 PF00376 MerR family regulatory protein CXB48_RS07865 PF02525 Flavodoxin-like fold CXB48_RS07885 PF00141 Peroxidase CXB48_RS07890 PF13649 Methyltransferase domain CXB48_RS07900 PF02525 Flavodoxin-like fold CXB48_RS07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS07905 PF03466 LysR substrate binding domain CXB48_RS07920 PF00268 Ribonucleotide reductase, small chain CXB48_RS07925 PF03477 ATP cone domain CXB48_RS07925 PF02867 Ribonucleotide reductase, barrel domain CXB48_RS07925 PF00317 Ribonucleotide reductase, all-alpha domain CXB48_RS07930 PF00072 Response regulator receiver domain CXB48_RS07930 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS07935 PF00672 HAMP domain CXB48_RS07935 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS07940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS07940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS07940 PF09317 Domain of unknown function (DUF1974) CXB48_RS07940 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS07945 PF00924 Mechanosensitive ion channel CXB48_RS07950 PF00581 Rhodanese-like domain CXB48_RS07970 PF11871 Domain of unknown function (DUF3391) CXB48_RS07970 PF01966 HD domain CXB48_RS07980 PF00202 Aminotransferase class-III CXB48_RS07990 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CXB48_RS07995 PF00005 ABC transporter CXB48_RS08000 PF01061 ABC-2 type transporter CXB48_RS08005 PF14489 QueF-like protein CXB48_RS08005 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CXB48_RS08020 PF04333 MlaA lipoprotein CXB48_RS08030 PF00072 Response regulator receiver domain CXB48_RS08040 PF00923 Transaldolase/Fructose-6-phosphate aldolase CXB48_RS08045 PF01207 Dihydrouridine synthase (Dus) CXB48_RS08050 PF00589 Phage integrase family CXB48_RS08060 PF07929 Plasmid pRiA4b ORF-3-like protein CXB48_RS08065 PF13005 zinc-finger binding domain of transposase IS66 CXB48_RS08065 PF13007 Transposase C of IS166 homeodomain CXB48_RS08065 PF13817 IS66 C-terminal element CXB48_RS08065 PF03050 Transposase IS66 family CXB48_RS08070 PF05717 IS66 Orf2 like protein CXB48_RS08100 PF01758 Sodium Bile acid symporter family CXB48_RS08110 PF00881 Nitroreductase family CXB48_RS08115 PF00753 Metallo-beta-lactamase superfamily CXB48_RS08125 PF02560 Cyanate lyase C-terminal domain CXB48_RS08130 PF00005 ABC transporter CXB48_RS08135 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS08140 PF00005 ABC transporter CXB48_RS08145 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS08145 PF18113 Rubredoxin binding C-terminal domain CXB48_RS08160 PF01590 GAF domain CXB48_RS08160 PF02954 Bacterial regulatory protein, Fis family CXB48_RS08160 PF00158 Sigma-54 interaction domain CXB48_RS08170 PF02899 Phage integrase, N-terminal SAM-like domain CXB48_RS08170 PF00589 Phage integrase family CXB48_RS08220 PF08281 Sigma-70, region 4 CXB48_RS08220 PF04542 Sigma-70 region 2 CXB48_RS08235 PF00970 Oxidoreductase FAD-binding domain CXB48_RS08235 PF00111 2Fe-2S iron-sulfur cluster binding domain CXB48_RS08235 PF00175 Oxidoreductase NAD-binding domain CXB48_RS08250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS08250 PF03466 LysR substrate binding domain CXB48_RS08255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXB48_RS08255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CXB48_RS08260 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS08270 PF00005 ABC transporter CXB48_RS08295 PF13411 MerR HTH family regulatory protein CXB48_RS08310 PF00795 Carbon-nitrogen hydrolase CXB48_RS08315 PF01252 Signal peptidase (SPase) II CXB48_RS08330 PF13005 zinc-finger binding domain of transposase IS66 CXB48_RS08330 PF13007 Transposase C of IS166 homeodomain CXB48_RS08330 PF13817 IS66 C-terminal element CXB48_RS08330 PF03050 Transposase IS66 family CXB48_RS08350 PF00665 Integrase core domain CXB48_RS08355 PF01695 IstB-like ATP binding protein CXB48_RS08375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXB48_RS08385 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS08390 PF07519 Tannase and feruloyl esterase CXB48_RS08395 PF12833 Helix-turn-helix domain CXB48_RS08395 PF14525 AraC-binding-like domain CXB48_RS08400 PF00355 Rieske [2Fe-2S] domain CXB48_RS08400 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CXB48_RS08405 PF00866 Ring hydroxylating beta subunit CXB48_RS08410 PF00175 Oxidoreductase NAD-binding domain CXB48_RS08410 PF00970 Oxidoreductase FAD-binding domain CXB48_RS08410 PF00111 2Fe-2S iron-sulfur cluster binding domain CXB48_RS08415 PF00106 short chain dehydrogenase CXB48_RS08420 PF07690 Major Facilitator Superfamily CXB48_RS08425 PF13378 Enolase C-terminal domain-like CXB48_RS08425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CXB48_RS08430 PF02426 Muconolactone delta-isomerase CXB48_RS08435 PF00775 Dioxygenase CXB48_RS08435 PF04444 Catechol dioxygenase N terminus CXB48_RS08440 PF03594 Benzoate membrane transport protein CXB48_RS08450 PF13005 zinc-finger binding domain of transposase IS66 CXB48_RS08450 PF03050 Transposase IS66 family CXB48_RS08450 PF13817 IS66 C-terminal element CXB48_RS08450 PF13007 Transposase C of IS166 homeodomain CXB48_RS08465 PF03573 outer membrane porin, OprD family CXB48_RS08500 PF01242 6-pyruvoyl tetrahydropterin synthase CXB48_RS08505 PF03553 Na+/H+ antiporter family CXB48_RS08505 PF13726 Na+-H+ antiporter family CXB48_RS08510 PF01594 AI-2E family transporter CXB48_RS08520 PF00463 Isocitrate lyase family CXB48_RS08535 PF13673 Acetyltransferase (GNAT) domain CXB48_RS08540 PF08007 Cupin superfamily protein CXB48_RS08545 PF08328 Adenylosuccinate lyase C-terminal CXB48_RS08545 PF00206 Lyase CXB48_RS08550 PF04356 Protein of unknown function (DUF489) CXB48_RS08560 PF00293 NUDIX domain CXB48_RS08565 PF03971 Monomeric isocitrate dehydrogenase CXB48_RS08570 PF00180 Isocitrate/isopropylmalate dehydrogenase CXB48_RS08575 PF00313 'Cold-shock' DNA-binding domain CXB48_RS08580 PF02617 ATP-dependent Clp protease adaptor protein ClpS CXB48_RS08585 PF10431 C-terminal, D2-small domain, of ClpB protein CXB48_RS08585 PF02861 Clp amino terminal domain, pathogenicity island component CXB48_RS08585 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS08585 PF07724 AAA domain (Cdc48 subfamily) CXB48_RS08585 PF17871 AAA lid domain CXB48_RS08595 PF01610 Transposase CXB48_RS08595 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS08595 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS08600 PF01176 Translation initiation factor 1A / IF-1 CXB48_RS08605 PF04377 Arginine-tRNA-protein transferase, C terminus CXB48_RS08605 PF04376 Arginine-tRNA-protein transferase, N terminus CXB48_RS08610 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CXB48_RS08615 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS08620 PF01580 FtsK/SpoIIIE family CXB48_RS08620 PF09397 Ftsk gamma domain CXB48_RS08620 PF17854 FtsK alpha domain CXB48_RS08620 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CXB48_RS08625 PF03548 Outer membrane lipoprotein carrier protein LolA CXB48_RS08630 PF12002 MgsA AAA+ ATPase C terminal CXB48_RS08630 PF16193 AAA C-terminal domain CXB48_RS08630 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS08635 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CXB48_RS08640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CXB48_RS08640 PF02403 Seryl-tRNA synthetase N-terminal domain CXB48_RS08645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CXB48_RS08645 PF10414 Sirohaem synthase dimerisation region CXB48_RS08645 PF14824 Sirohaem biosynthesis protein central CXB48_RS08650 PF00072 Response regulator receiver domain CXB48_RS08650 PF00196 Bacterial regulatory proteins, luxR family CXB48_RS08665 PF00005 ABC transporter CXB48_RS08685 PF00672 HAMP domain CXB48_RS08685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS08695 PF05231 MASE1 CXB48_RS08695 PF07730 Histidine kinase CXB48_RS08695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS08700 PF00196 Bacterial regulatory proteins, luxR family CXB48_RS08700 PF00072 Response regulator receiver domain CXB48_RS08715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS08715 PF08447 PAS fold CXB48_RS08715 PF13426 PAS domain CXB48_RS08725 PF13360 PQQ-like domain CXB48_RS08725 PF01011 PQQ enzyme repeat CXB48_RS08730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXB48_RS08735 PF01464 Transglycosylase SLT domain CXB48_RS08735 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXB48_RS08745 PF16123 Hydroxyacylglutathione hydrolase C-terminus CXB48_RS08745 PF00753 Metallo-beta-lactamase superfamily CXB48_RS08755 PF13360 PQQ-like domain CXB48_RS08755 PF01011 PQQ enzyme repeat CXB48_RS08760 PF12833 Helix-turn-helix domain CXB48_RS08775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXB48_RS08775 PF00005 ABC transporter CXB48_RS08780 PF12911 N-terminal TM domain of oligopeptide transport permease C CXB48_RS08780 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS08785 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS08790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXB48_RS08795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXB48_RS08805 PF01476 LysM domain CXB48_RS08805 PF01464 Transglycosylase SLT domain CXB48_RS08810 PF00753 Metallo-beta-lactamase superfamily CXB48_RS08810 PF16123 Hydroxyacylglutathione hydrolase C-terminus CXB48_RS08820 PF00075 RNase H CXB48_RS08825 PF00929 Exonuclease CXB48_RS08830 PF01276 Orn/Lys/Arg decarboxylase, major domain CXB48_RS08830 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CXB48_RS08830 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CXB48_RS08835 PF00378 Enoyl-CoA hydratase/isomerase CXB48_RS08845 PF09297 NADH pyrophosphatase zinc ribbon domain CXB48_RS08845 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CXB48_RS08845 PF00293 NUDIX domain CXB48_RS08850 PF01925 Sulfite exporter TauE/SafE CXB48_RS08880 PF01343 Peptidase family S49 CXB48_RS08880 PF08496 Peptidase family S49 N-terminal CXB48_RS08885 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS08885 PF00107 Zinc-binding dehydrogenase CXB48_RS08895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CXB48_RS08895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CXB48_RS08905 PF00011 Hsp20/alpha crystallin family CXB48_RS08920 PF04055 Radical SAM superfamily CXB48_RS08925 PF07690 Major Facilitator Superfamily CXB48_RS08950 PF01757 Acyltransferase family CXB48_RS08960 PF02574 Homocysteine S-methyltransferase CXB48_RS08960 PF02607 B12 binding domain CXB48_RS08960 PF00809 Pterin binding enzyme CXB48_RS08960 PF02310 B12 binding domain CXB48_RS08960 PF02965 Vitamin B12 dependent methionine synthase, activation domain CXB48_RS08970 PF01521 Iron-sulphur cluster biosynthesis CXB48_RS08970 PF01106 NifU-like domain CXB48_RS08975 PF00072 Response regulator receiver domain CXB48_RS08980 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS08980 PF05230 MASE2 domain CXB48_RS08995 PF04239 Protein of unknown function (DUF421) CXB48_RS09010 PF17200 Single Cache domain 2 CXB48_RS09010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS09010 PF00672 HAMP domain CXB48_RS09015 PF02673 Bacitracin resistance protein BacA CXB48_RS09020 PF00005 ABC transporter CXB48_RS09020 PF12848 ABC transporter CXB48_RS09035 PF01266 FAD dependent oxidoreductase CXB48_RS09040 PF03466 LysR substrate binding domain CXB48_RS09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS09045 PF03969 AFG1-like ATPase CXB48_RS09060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXB48_RS09065 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS09070 PF00356 Bacterial regulatory proteins, lacI family CXB48_RS09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS09075 PF03466 LysR substrate binding domain CXB48_RS09080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS09080 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS09080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS09090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CXB48_RS09090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CXB48_RS09105 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS09110 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS09125 PF00294 pfkB family carbohydrate kinase CXB48_RS09130 PF12849 PBP superfamily domain CXB48_RS09135 PF03372 Endonuclease/Exonuclease/phosphatase family CXB48_RS09145 PF01103 Surface antigen CXB48_RS09145 PF07244 Surface antigen variable number repeat CXB48_RS09145 PF17243 POTRA domain TamA domain 1 CXB48_RS09150 PF04357 TamB, inner membrane protein subunit of TAM complex CXB48_RS09155 PF01235 Sodium:alanine symporter family CXB48_RS09160 PF08534 Redoxin CXB48_RS09170 PF03023 Lipid II flippase MurJ CXB48_RS09175 PF13533 Biotin-lipoyl like CXB48_RS09180 PF00873 AcrB/AcrD/AcrF family CXB48_RS09185 PF00873 AcrB/AcrD/AcrF family CXB48_RS09190 PF02321 Outer membrane efflux protein CXB48_RS09195 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS09205 PF01909 Nucleotidyltransferase domain CXB48_RS09205 PF13427 Domain of unknown function (DUF4111) CXB48_RS09210 PF02321 Outer membrane efflux protein CXB48_RS09215 PF00873 AcrB/AcrD/AcrF family CXB48_RS09220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CXB48_RS09225 PF03466 LysR substrate binding domain CXB48_RS09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS09230 PF02801 Beta-ketoacyl synthase, C-terminal domain CXB48_RS09230 PF00109 Beta-ketoacyl synthase, N-terminal domain CXB48_RS09230 PF08659 KR domain CXB48_RS09230 PF00698 Acyl transferase domain CXB48_RS09230 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS09230 PF14765 Polyketide synthase dehydratase CXB48_RS09230 PF16197 Ketoacyl-synthetase C-terminal extension CXB48_RS09230 PF00550 Phosphopantetheine attachment site CXB48_RS09240 PF02735 Ku70/Ku80 beta-barrel domain CXB48_RS09245 PF04679 ATP dependent DNA ligase C terminal region CXB48_RS09245 PF01068 ATP dependent DNA ligase domain CXB48_RS09245 PF13298 DNA polymerase Ligase (LigD) CXB48_RS09250 PF00384 Molybdopterin oxidoreductase CXB48_RS09250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CXB48_RS09250 PF01568 Molydopterin dinucleotide binding domain CXB48_RS09255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CXB48_RS09255 PF00384 Molybdopterin oxidoreductase CXB48_RS09255 PF01568 Molydopterin dinucleotide binding domain CXB48_RS09260 PF13247 4Fe-4S dicluster domain CXB48_RS09260 PF09163 Formate dehydrogenase N, transmembrane CXB48_RS09260 PF12800 4Fe-4S binding domain CXB48_RS09265 PF01292 Prokaryotic cytochrome b561 CXB48_RS09270 PF04216 Protein involved in formate dehydrogenase formation CXB48_RS09275 PF11896 Domain of unknown function (DUF3416) CXB48_RS09275 PF00128 Alpha amylase, catalytic domain CXB48_RS09280 PF00128 Alpha amylase, catalytic domain CXB48_RS09280 PF16657 Maltogenic Amylase, C-terminal domain CXB48_RS09285 PF02806 Alpha amylase, C-terminal all-beta domain CXB48_RS09285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CXB48_RS09285 PF00128 Alpha amylase, catalytic domain CXB48_RS09290 PF03706 Lysylphosphatidylglycerol synthase TM region CXB48_RS09295 PF13091 PLD-like domain CXB48_RS09300 PF03372 Endonuclease/Exonuclease/phosphatase family CXB48_RS09310 PF00107 Zinc-binding dehydrogenase CXB48_RS09310 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS09310 PF13823 Alcohol dehydrogenase GroES-associated CXB48_RS09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS09315 PF03466 LysR substrate binding domain CXB48_RS09320 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CXB48_RS09330 PF01551 Peptidase family M23 CXB48_RS09330 PF08525 Opacity-associated protein A N-terminal motif CXB48_RS09330 PF01476 LysM domain CXB48_RS09335 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CXB48_RS09335 PF00128 Alpha amylase, catalytic domain CXB48_RS09345 PF00128 Alpha amylase, catalytic domain CXB48_RS09350 PF02446 4-alpha-glucanotransferase CXB48_RS09355 PF00128 Alpha amylase, catalytic domain CXB48_RS09355 PF11941 Domain of unknown function (DUF3459) CXB48_RS09355 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CXB48_RS09360 PF00534 Glycosyl transferases group 1 CXB48_RS09360 PF08323 Starch synthase catalytic domain CXB48_RS09365 PF00994 Probable molybdopterin binding domain CXB48_RS09365 PF18146 Damage-inducible protein CinA KH domain CXB48_RS09365 PF02464 Competence-damaged protein CXB48_RS09370 PF12794 Mechanosensitive ion channel inner membrane domain 1 CXB48_RS09370 PF00924 Mechanosensitive ion channel CXB48_RS09370 PF12795 Mechanosensitive ion channel porin domain CXB48_RS09375 PF05974 Domain of unknown function (DUF892) CXB48_RS09395 PF13298 DNA polymerase Ligase (LigD) CXB48_RS09395 PF01068 ATP dependent DNA ligase domain CXB48_RS09395 PF04679 ATP dependent DNA ligase C terminal region CXB48_RS09400 PF00205 Thiamine pyrophosphate enzyme, central domain CXB48_RS09400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXB48_RS09400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXB48_RS09410 PF00355 Rieske [2Fe-2S] domain CXB48_RS09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS09425 PF03466 LysR substrate binding domain CXB48_RS09430 PF02321 Outer membrane efflux protein CXB48_RS09435 PF13533 Biotin-lipoyl like CXB48_RS09440 PF07869 Protein of unknown function (DUF1656) CXB48_RS09445 PF04632 Fusaric acid resistance protein family CXB48_RS09460 PF14572 Phosphoribosyl synthetase-associated domain CXB48_RS09460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CXB48_RS09470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS09470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXB48_RS09475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CXB48_RS09480 PF00483 Nucleotidyl transferase CXB48_RS09485 PF00672 HAMP domain CXB48_RS09485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS09490 PF06969 HemN C-terminal domain CXB48_RS09490 PF04055 Radical SAM superfamily CXB48_RS09495 PF08774 VRR-NUC domain CXB48_RS09495 PF18081 Fanconi anemia-associated nuclease SAP domain CXB48_RS09510 PF09722 Protein of unknown function (DUF2384) CXB48_RS09535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CXB48_RS09535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CXB48_RS09540 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CXB48_RS09550 PF03358 NADPH-dependent FMN reductase CXB48_RS09555 PF01022 Bacterial regulatory protein, arsR family CXB48_RS09565 PF01758 Sodium Bile acid symporter family CXB48_RS09600 PF01066 CDP-alcohol phosphatidyltransferase CXB48_RS09605 PF02151 UvrB/uvrC motif CXB48_RS09605 PF01541 GIY-YIG catalytic domain CXB48_RS09605 PF08459 UvrC Helix-hairpin-helix N-terminal CXB48_RS09610 PF00196 Bacterial regulatory proteins, luxR family CXB48_RS09610 PF00072 Response regulator receiver domain CXB48_RS09620 PF00873 AcrB/AcrD/AcrF family CXB48_RS09625 PF00529 HlyD membrane-fusion protein of T1SS CXB48_RS09625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CXB48_RS09640 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS09640 PF00989 PAS fold CXB48_RS09640 PF00672 HAMP domain CXB48_RS09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS09640 PF18698 Histidine kinase sensor domain CXB48_RS09645 PF00465 Iron-containing alcohol dehydrogenase CXB48_RS09650 PF00326 Prolyl oligopeptidase family CXB48_RS09655 PF04055 Radical SAM superfamily CXB48_RS09655 PF13186 Iron-sulfur cluster-binding domain CXB48_RS09660 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CXB48_RS09665 PF03070 TENA/THI-4/PQQC family CXB48_RS09670 PF12706 Beta-lactamase superfamily domain CXB48_RS09675 PF08042 PqqA family CXB48_RS09680 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS09680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CXB48_RS09685 PF01610 Transposase CXB48_RS09685 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS09685 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS09690 PF00171 Aldehyde dehydrogenase family CXB48_RS09700 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CXB48_RS09705 PF13186 Iron-sulfur cluster-binding domain CXB48_RS09705 PF04055 Radical SAM superfamily CXB48_RS09715 PF00266 Aminotransferase class-V CXB48_RS09720 PF01180 Dihydroorotate dehydrogenase CXB48_RS09725 PF09312 SurA N-terminal domain CXB48_RS09725 PF00639 PPIC-type PPIASE domain CXB48_RS09730 PF00216 Bacterial DNA-binding protein CXB48_RS09735 PF05362 Lon protease (S16) C-terminal proteolytic domain CXB48_RS09735 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS09735 PF02190 ATP-dependent protease La (LON) substrate-binding domain CXB48_RS09740 PF10431 C-terminal, D2-small domain, of ClpB protein CXB48_RS09740 PF07724 AAA domain (Cdc48 subfamily) CXB48_RS09740 PF06689 ClpX C4-type zinc finger CXB48_RS09745 PF00574 Clp protease CXB48_RS09750 PF05698 Bacterial trigger factor protein (TF) C-terminus CXB48_RS09750 PF05697 Bacterial trigger factor protein (TF) CXB48_RS09750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CXB48_RS09760 PF07729 FCD domain CXB48_RS09760 PF00392 Bacterial regulatory proteins, gntR family CXB48_RS09780 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CXB48_RS09780 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CXB48_RS09785 PF09190 DALR domain CXB48_RS09785 PF01406 tRNA synthetases class I (C) catalytic domain CXB48_RS09790 PF00749 tRNA synthetases class I (E and Q), catalytic domain CXB48_RS09790 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CXB48_RS09795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CXB48_RS09800 PF00149 Calcineurin-like phosphoesterase CXB48_RS09805 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CXB48_RS09820 PF00330 Aconitase family (aconitate hydratase) CXB48_RS09820 PF06434 Aconitate hydratase 2 N-terminus CXB48_RS09820 PF11791 Aconitate B N-terminal domain CXB48_RS09825 PF00691 OmpA family CXB48_RS09825 PF05736 OprF membrane domain CXB48_RS09835 PF05552 Conserved TM helix CXB48_RS09845 PF01544 CorA-like Mg2+ transporter protein CXB48_RS09850 PF03737 Aldolase/RraA CXB48_RS09855 PF02896 PEP-utilising enzyme, TIM barrel domain CXB48_RS09855 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CXB48_RS09855 PF00391 PEP-utilising enzyme, mobile domain CXB48_RS09865 PF03618 Kinase/pyrophosphorylase CXB48_RS09870 PF04303 PrpF protein CXB48_RS09875 PF00330 Aconitase family (aconitate hydratase) CXB48_RS09875 PF00694 Aconitase C-terminal domain CXB48_RS09880 PF00285 Citrate synthase, C-terminal domain CXB48_RS09890 PF07729 FCD domain CXB48_RS09890 PF00392 Bacterial regulatory proteins, gntR family CXB48_RS09910 PF04715 Anthranilate synthase component I, N terminal region CXB48_RS09910 PF00425 chorismate binding enzyme CXB48_RS09920 PF01507 Phosphoadenosine phosphosulfate reductase family CXB48_RS09925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS09925 PF03466 LysR substrate binding domain CXB48_RS09930 PF08546 Ketopantoate reductase PanE/ApbA C terminal CXB48_RS09930 PF02558 Ketopantoate reductase PanE/ApbA CXB48_RS09935 PF00793 DAHP synthetase I family CXB48_RS09945 PF11839 Alanine-zipper, major outer membrane lipoprotein CXB48_RS09955 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CXB48_RS09960 PF03734 L,D-transpeptidase catalytic domain CXB48_RS09960 PF17969 L,D-transpeptidase C-terminal domain CXB48_RS09970 PF13472 GDSL-like Lipase/Acylhydrolase family CXB48_RS09975 PF00005 ABC transporter CXB48_RS09985 PF01272 Transcription elongation factor, GreA/GreB, C-term CXB48_RS09985 PF03449 Transcription elongation factor, N-terminal CXB48_RS09990 PF00561 alpha/beta hydrolase fold CXB48_RS09995 PF03280 Proteobacterial lipase chaperone protein CXB48_RS10000 PF01464 Transglycosylase SLT domain CXB48_RS10000 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXB48_RS10005 PF01026 TatD related DNase CXB48_RS10010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS10010 PF00672 HAMP domain CXB48_RS10010 PF12729 Four helix bundle sensory module for signal transduction CXB48_RS10020 PF08402 TOBE domain CXB48_RS10020 PF00005 ABC transporter CXB48_RS10035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CXB48_RS10035 PF02785 Biotin carboxylase C-terminal domain CXB48_RS10035 PF00289 Biotin carboxylase, N-terminal domain CXB48_RS10040 PF01425 Amidase CXB48_RS10045 PF00248 Aldo/keto reductase family CXB48_RS10050 PF09084 NMT1/THI5 like CXB48_RS10075 PF02633 Creatinine amidohydrolase CXB48_RS10080 PF00857 Isochorismatase family CXB48_RS10090 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS10095 PF00005 ABC transporter CXB48_RS10100 PF00561 alpha/beta hydrolase fold CXB48_RS10105 PF00120 Glutamine synthetase, catalytic domain CXB48_RS10115 PF08361 MAATS-type transcriptional repressor, C-terminal region CXB48_RS10115 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS10130 PF01027 Inhibitor of apoptosis-promoting Bax1 CXB48_RS10140 PF02635 DsrE/DsrF-like family CXB48_RS10145 PF02635 DsrE/DsrF-like family CXB48_RS10155 PF04358 DsrC like protein CXB48_RS10160 PF00591 Glycosyl transferase family, a/b domain CXB48_RS10160 PF02885 Glycosyl transferase family, helical bundle domain CXB48_RS10165 PF13409 Glutathione S-transferase, N-terminal domain CXB48_RS10170 PF00072 Response regulator receiver domain CXB48_RS10170 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS10170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS10170 PF09456 RcsC Alpha-Beta-Loop (ABL) CXB48_RS10185 PF00675 Insulinase (Peptidase family M16) CXB48_RS10185 PF05193 Peptidase M16 inactive domain CXB48_RS10190 PF13411 MerR HTH family regulatory protein CXB48_RS10200 PF01227 GTP cyclohydrolase I CXB48_RS10205 PF02152 Dihydroneopterin aldolase CXB48_RS10225 PF01740 STAS domain CXB48_RS10225 PF13426 PAS domain CXB48_RS10230 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS10230 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS10230 PF00563 EAL domain CXB48_RS10235 PF00762 Ferrochelatase CXB48_RS10240 PF08338 Domain of unknown function (DUF1731) CXB48_RS10240 PF01370 NAD dependent epimerase/dehydratase family CXB48_RS10245 PF08349 Protein of unknown function (DUF1722) CXB48_RS10250 PF13411 MerR HTH family regulatory protein CXB48_RS10255 PF03441 FAD binding domain of DNA photolyase CXB48_RS10255 PF00875 DNA photolyase CXB48_RS10265 PF00106 short chain dehydrogenase CXB48_RS10285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS10285 PF12729 Four helix bundle sensory module for signal transduction CXB48_RS10285 PF00672 HAMP domain CXB48_RS10295 PF02146 Sir2 family CXB48_RS10300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS10300 PF13806 Rieske-like [2Fe-2S] domain CXB48_RS10300 PF04324 BFD-like [2Fe-2S] binding domain CXB48_RS10300 PF18267 Rubredoxin NAD+ reductase C-terminal domain CXB48_RS10300 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CXB48_RS10300 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CXB48_RS10305 PF18267 Rubredoxin NAD+ reductase C-terminal domain CXB48_RS10305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS10305 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CXB48_RS10305 PF04324 BFD-like [2Fe-2S] binding domain CXB48_RS10305 PF13806 Rieske-like [2Fe-2S] domain CXB48_RS10305 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CXB48_RS10315 PF00069 Protein kinase domain CXB48_RS10320 PF12462 DNA helicase IV / RNA helicase N terminal CXB48_RS10320 PF00580 UvrD/REP helicase N-terminal domain CXB48_RS10320 PF13361 UvrD-like helicase C-terminal domain CXB48_RS10325 PF00072 Response regulator receiver domain CXB48_RS10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS10325 PF13188 PAS domain CXB48_RS10325 PF08448 PAS fold CXB48_RS10325 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS10340 PF02472 Biopolymer transport protein ExbD/TolR CXB48_RS10345 PF01618 MotA/TolQ/ExbB proton channel family CXB48_RS10350 PF02333 Phytase CXB48_RS10365 PF13426 PAS domain CXB48_RS10365 PF08448 PAS fold CXB48_RS10365 PF08447 PAS fold CXB48_RS10365 PF05231 MASE1 CXB48_RS10365 PF00563 EAL domain CXB48_RS10365 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS10370 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CXB48_RS10370 PF12833 Helix-turn-helix domain CXB48_RS10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS10375 PF03466 LysR substrate binding domain CXB48_RS10380 PF02634 FdhD/NarQ family CXB48_RS10385 PF01568 Molydopterin dinucleotide binding domain CXB48_RS10385 PF00384 Molybdopterin oxidoreductase CXB48_RS10400 PF02386 Cation transport protein CXB48_RS10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS10405 PF13426 PAS domain CXB48_RS10405 PF00072 Response regulator receiver domain CXB48_RS10415 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS10415 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS10415 PF01610 Transposase CXB48_RS10420 PF08239 Bacterial SH3 domain CXB48_RS10435 PF12833 Helix-turn-helix domain CXB48_RS10450 PF00343 Carbohydrate phosphorylase CXB48_RS10450 PF11897 Protein of unknown function (DUF3417) CXB48_RS10465 PF00171 Aldehyde dehydrogenase family CXB48_RS10470 PF00378 Enoyl-CoA hydratase/isomerase CXB48_RS10475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CXB48_RS10475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CXB48_RS10480 PF00378 Enoyl-CoA hydratase/isomerase CXB48_RS10485 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS10485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS10485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS10495 PF02515 CoA-transferase family III CXB48_RS10500 PF00501 AMP-binding enzyme CXB48_RS10500 PF13193 AMP-binding enzyme C-terminal domain CXB48_RS10505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS10505 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS10505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS10510 PF02803 Thiolase, C-terminal domain CXB48_RS10510 PF00108 Thiolase, N-terminal domain CXB48_RS10515 PF00106 short chain dehydrogenase CXB48_RS10525 PF09335 SNARE associated Golgi protein CXB48_RS10540 PF13559 Domain of unknown function (DUF4129) CXB48_RS10540 PF11992 Domain of unknown function (DUF3488) CXB48_RS10540 PF01841 Transglutaminase-like superfamily CXB48_RS10550 PF17863 AAA lid domain CXB48_RS10550 PF07726 ATPase family associated with various cellular activities (AAA) CXB48_RS10565 PF02769 AIR synthase related protein, C-terminal domain CXB48_RS10565 PF00586 AIR synthase related protein, N-terminal domain CXB48_RS10570 PF01734 Patatin-like phospholipase CXB48_RS10575 PF01594 AI-2E family transporter CXB48_RS10595 PF03061 Thioesterase superfamily CXB48_RS10610 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CXB48_RS10610 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CXB48_RS10615 PF07977 FabA-like domain CXB48_RS10620 PF00109 Beta-ketoacyl synthase, N-terminal domain CXB48_RS10620 PF02801 Beta-ketoacyl synthase, C-terminal domain CXB48_RS10625 PF00375 Sodium:dicarboxylate symporter family CXB48_RS10630 PF12729 Four helix bundle sensory module for signal transduction CXB48_RS10630 PF00672 HAMP domain CXB48_RS10630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS10635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS10635 PF12729 Four helix bundle sensory module for signal transduction CXB48_RS10635 PF00672 HAMP domain CXB48_RS10655 PF00183 Hsp90 protein CXB48_RS10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS10680 PF05525 Branched-chain amino acid transport protein CXB48_RS10685 PF02629 CoA binding domain CXB48_RS10685 PF00549 CoA-ligase CXB48_RS10690 PF08442 ATP-grasp domain CXB48_RS10690 PF00549 CoA-ligase CXB48_RS10695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXB48_RS10695 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS10700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CXB48_RS10700 PF00364 Biotin-requiring enzyme CXB48_RS10700 PF02817 e3 binding domain CXB48_RS10705 PF16078 2-oxoglutarate dehydrogenase N-terminus CXB48_RS10705 PF00676 Dehydrogenase E1 component CXB48_RS10705 PF16870 2-oxoglutarate dehydrogenase C-terminal CXB48_RS10705 PF02779 Transketolase, pyrimidine binding domain CXB48_RS10710 PF13085 2Fe-2S iron-sulfur cluster binding domain CXB48_RS10715 PF02910 Fumarate reductase flavoprotein C-term CXB48_RS10715 PF00890 FAD binding domain CXB48_RS10720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CXB48_RS10725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CXB48_RS10730 PF00285 Citrate synthase, C-terminal domain CXB48_RS10735 PF03692 Putative zinc- or iron-chelating domain CXB48_RS10745 PF06865 Pyrimidine/purine nucleoside phosphorylase CXB48_RS10755 PF02561 Flagellar protein FliS CXB48_RS10760 PF02465 Flagellar hook-associated protein 2 N-terminus CXB48_RS10760 PF07195 Flagellar hook-associated protein 2 C-terminus CXB48_RS10760 PF07196 Flagellin hook IN motif CXB48_RS10770 PF07196 Flagellin hook IN motif CXB48_RS10770 PF00669 Bacterial flagellin N-terminal helical region CXB48_RS10770 PF00700 Bacterial flagellin C-terminal helical region CXB48_RS10775 PF00533 BRCA1 C Terminus (BRCT) domain CXB48_RS10775 PF12826 Helix-hairpin-helix motif CXB48_RS10775 PF03120 NAD-dependent DNA ligase OB-fold domain CXB48_RS10775 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CXB48_RS10775 PF01653 NAD-dependent DNA ligase adenylation domain CXB48_RS10780 PF04354 ZipA, C-terminal FtsZ-binding domain CXB48_RS10785 PF02463 RecF/RecN/SMC N terminal domain CXB48_RS10790 PF04055 Radical SAM superfamily CXB48_RS10790 PF06463 Molybdenum Cofactor Synthesis C CXB48_RS10795 PF00027 Cyclic nucleotide-binding domain CXB48_RS10795 PF00520 Ion transport protein CXB48_RS10810 PF00034 Cytochrome c CXB48_RS10810 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CXB48_RS10810 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CXB48_RS10815 PF00115 Cytochrome C and Quinol oxidase polypeptide I CXB48_RS10830 PF01206 Sulfurtransferase TusA CXB48_RS10835 PF01728 FtsJ-like methyltransferase CXB48_RS10835 PF18125 RlmM ferredoxin-like domain CXB48_RS10840 PF00330 Aconitase family (aconitate hydratase) CXB48_RS10840 PF00694 Aconitase C-terminal domain CXB48_RS10845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS10845 PF08447 PAS fold CXB48_RS10865 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CXB48_RS10865 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXB48_RS10870 PF00115 Cytochrome C and Quinol oxidase polypeptide I CXB48_RS10885 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CXB48_RS10885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXB48_RS10890 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CXB48_RS10890 PF12801 4Fe-4S binding domain CXB48_RS10890 PF13746 4Fe-4S dicluster domain CXB48_RS10900 PF00403 Heavy-metal-associated domain CXB48_RS10915 PF02540 NAD synthase CXB48_RS10920 PF04055 Radical SAM superfamily CXB48_RS10920 PF06969 HemN C-terminal domain CXB48_RS10925 PF00325 Bacterial regulatory proteins, crp family CXB48_RS10925 PF00027 Cyclic nucleotide-binding domain CXB48_RS10930 PF00156 Phosphoribosyl transferase domain CXB48_RS10935 PF02630 SCO1/SenC CXB48_RS10945 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS10950 PF00005 ABC transporter CXB48_RS10960 PF02132 RecR protein CXB48_RS10960 PF13662 Toprim domain CXB48_RS10965 PF02575 YbaB/EbfC DNA-binding family CXB48_RS10970 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CXB48_RS10970 PF12170 DNA polymerase III tau subunit V interacting with alpha CXB48_RS10970 PF12169 DNA polymerase III subunits gamma and tau domain III CXB48_RS10975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CXB48_RS10975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXB48_RS10975 PF11890 Domain of unknown function (DUF3410) CXB48_RS10980 PF01554 MatE CXB48_RS11005 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS11005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CXB48_RS11015 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CXB48_RS11015 PF12833 Helix-turn-helix domain CXB48_RS11025 PF02322 Cytochrome bd terminal oxidase subunit II CXB48_RS11030 PF01654 Cytochrome bd terminal oxidase subunit I CXB48_RS11035 PF02868 Thermolysin metallopeptidase, alpha-helical domain CXB48_RS11035 PF01447 Thermolysin metallopeptidase, catalytic domain CXB48_RS11035 PF16485 Protealysin propeptide CXB48_RS11045 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS11045 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS11045 PF00563 EAL domain CXB48_RS11055 PF07690 Major Facilitator Superfamily CXB48_RS11060 PF03358 NADPH-dependent FMN reductase CXB48_RS11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS11065 PF03466 LysR substrate binding domain CXB48_RS11070 PF01212 Beta-eliminating lyase CXB48_RS11075 PF01197 Ribosomal protein L31 CXB48_RS11080 PF07715 TonB-dependent Receptor Plug Domain CXB48_RS11080 PF00593 TonB dependent receptor CXB48_RS11085 PF02514 CobN/Magnesium Chelatase CXB48_RS11105 PF01810 LysE type translocator CXB48_RS11110 PF09278 MerR, DNA binding CXB48_RS11110 PF00376 MerR family regulatory protein CXB48_RS11130 PF03958 Bacterial type II/III secretion system short domain CXB48_RS11130 PF00263 Bacterial type II and III secretion system protein CXB48_RS11135 PF01053 Cys/Met metabolism PLP-dependent enzyme CXB48_RS11140 PF00156 Phosphoribosyl transferase domain CXB48_RS11145 PF02674 Colicin V production protein CXB48_RS11150 PF05036 Sporulation related domain CXB48_RS11155 PF08245 Mur ligase middle domain CXB48_RS11155 PF02875 Mur ligase family, glutamate ligase domain CXB48_RS11160 PF17848 Acetyl-coA carboxylase zinc finger domain CXB48_RS11160 PF01039 Carboxyl transferase domain CXB48_RS11165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CXB48_RS11170 PF01416 tRNA pseudouridine synthase CXB48_RS11180 PF02774 Semialdehyde dehydrogenase, dimerisation domain CXB48_RS11180 PF01118 Semialdehyde dehydrogenase, NAD binding domain CXB48_RS11185 PF02774 Semialdehyde dehydrogenase, dimerisation domain CXB48_RS11185 PF01118 Semialdehyde dehydrogenase, NAD binding domain CXB48_RS11190 PF00180 Isocitrate/isopropylmalate dehydrogenase CXB48_RS11195 PF00694 Aconitase C-terminal domain CXB48_RS11200 PF00330 Aconitase family (aconitate hydratase) CXB48_RS11205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS11210 PF00011 Hsp20/alpha crystallin family CXB48_RS11220 PF01207 Dihydrouridine synthase (Dus) CXB48_RS11255 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CXB48_RS11265 PF00535 Glycosyl transferase family 2 CXB48_RS11270 PF02706 Chain length determinant protein CXB48_RS11270 PF13807 G-rich domain on putative tyrosine kinase CXB48_RS11270 PF13614 AAA domain CXB48_RS11280 PF02357 Transcription termination factor nusG CXB48_RS11285 PF13439 Glycosyltransferase Family 4 CXB48_RS11285 PF00534 Glycosyl transferases group 1 CXB48_RS11300 PF13439 Glycosyltransferase Family 4 CXB48_RS11300 PF00534 Glycosyl transferases group 1 CXB48_RS11310 PF13439 Glycosyltransferase Family 4 CXB48_RS11310 PF00534 Glycosyl transferases group 1 CXB48_RS11335 PF04055 Radical SAM superfamily CXB48_RS11335 PF18693 TRAM domain CXB48_RS11335 PF00919 Uncharacterized protein family UPF0004 CXB48_RS11340 PF05199 GMC oxidoreductase CXB48_RS11340 PF00732 GMC oxidoreductase CXB48_RS11345 PF00171 Aldehyde dehydrogenase family CXB48_RS11350 PF02028 BCCT, betaine/carnitine/choline family transporter CXB48_RS11355 PF00291 Pyridoxal-phosphate dependent enzyme CXB48_RS11360 PF01980 tRNA-methyltransferase O CXB48_RS11360 PF18389 TrmO C-terminal domain CXB48_RS11365 PF01804 Penicillin amidase CXB48_RS11375 PF02810 SEC-C motif CXB48_RS11375 PF07517 SecA DEAD-like domain CXB48_RS11375 PF01043 SecA preprotein cross-linking domain CXB48_RS11375 PF07516 SecA Wing and Scaffold domain CXB48_RS11385 PF01048 Phosphorylase superfamily CXB48_RS11390 PF00933 Glycosyl hydrolase family 3 N terminal domain CXB48_RS11400 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS11405 PF00717 Peptidase S24-like CXB48_RS11405 PF01726 LexA DNA binding domain CXB48_RS11410 PF03846 Cell division inhibitor SulA CXB48_RS11420 PF00892 EamA-like transporter family CXB48_RS11430 PF01396 Topoisomerase DNA binding C4 zinc finger CXB48_RS11430 PF01751 Toprim domain CXB48_RS11430 PF08272 Topoisomerase I zinc-ribbon-like CXB48_RS11430 PF01131 DNA topoisomerase CXB48_RS11440 PF00108 Thiolase, N-terminal domain CXB48_RS11440 PF02803 Thiolase, C-terminal domain CXB48_RS11445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXB48_RS11445 PF00378 Enoyl-CoA hydratase/isomerase CXB48_RS11445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXB48_RS11450 PF00326 Prolyl oligopeptidase family CXB48_RS11450 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CXB48_RS11460 PF16177 Acetyl-coenzyme A synthetase N-terminus CXB48_RS11460 PF13193 AMP-binding enzyme C-terminal domain CXB48_RS11460 PF00501 AMP-binding enzyme CXB48_RS11465 PF10011 Predicted membrane protein (DUF2254) CXB48_RS11475 PF01609 Transposase DDE domain CXB48_RS11475 PF05598 Transposase domain (DUF772) CXB48_RS11490 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS11495 PF03466 LysR substrate binding domain CXB48_RS11500 PF02515 CoA-transferase family III CXB48_RS11505 PF00682 HMGL-like CXB48_RS11530 PF00561 alpha/beta hydrolase fold CXB48_RS11535 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS11540 PF03328 HpcH/HpaI aldolase/citrate lyase family CXB48_RS11545 PF02515 CoA-transferase family III CXB48_RS11550 PF03972 MmgE/PrpD family CXB48_RS11555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CXB48_RS11560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS11560 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS11560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS11570 PF03466 LysR substrate binding domain CXB48_RS11570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS11575 PF10011 Predicted membrane protein (DUF2254) CXB48_RS11585 PF00472 RF-1 domain CXB48_RS11595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS11595 PF16591 Helical bimodular sensor domain CXB48_RS11595 PF00672 HAMP domain CXB48_RS11600 PF05598 Transposase domain (DUF772) CXB48_RS11600 PF01609 Transposase DDE domain CXB48_RS11605 PF00005 ABC transporter CXB48_RS11605 PF00664 ABC transporter transmembrane region CXB48_RS11615 PF17773 UPF0176 acylphosphatase like domain CXB48_RS11615 PF00581 Rhodanese-like domain CXB48_RS11620 PF01722 BolA-like protein CXB48_RS11630 PF00206 Lyase CXB48_RS11630 PF10415 Fumarase C C-terminus CXB48_RS11635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXB48_RS11635 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS11640 PF13426 PAS domain CXB48_RS11640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS11640 PF00072 Response regulator receiver domain CXB48_RS11675 PF01979 Amidohydrolase family CXB48_RS11685 PF13419 Haloacid dehalogenase-like hydrolase CXB48_RS11690 PF00106 short chain dehydrogenase CXB48_RS11695 PF01479 S4 domain CXB48_RS11695 PF00849 RNA pseudouridylate synthase CXB48_RS11700 PF01081 KDPG and KHG aldolase CXB48_RS11705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CXB48_RS11710 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CXB48_RS11710 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CXB48_RS11715 PF05175 Methyltransferase small domain CXB48_RS11725 PF01713 Smr domain CXB48_RS11730 PF01227 GTP cyclohydrolase I CXB48_RS11735 PF02798 Glutathione S-transferase, N-terminal domain CXB48_RS11740 PF00155 Aminotransferase class I and II CXB48_RS11750 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CXB48_RS11755 PF00575 S1 RNA binding domain CXB48_RS11760 PF02224 Cytidylate kinase CXB48_RS11765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CXB48_RS11770 PF00155 Aminotransferase class I and II CXB48_RS11775 PF00800 Prephenate dehydratase CXB48_RS11775 PF01817 Chorismate mutase type II CXB48_RS11775 PF01842 ACT domain CXB48_RS11780 PF00266 Aminotransferase class-V CXB48_RS11785 PF00521 DNA gyrase/topoisomerase IV, subunit A CXB48_RS11785 PF03989 DNA gyrase C-terminal domain, beta-propeller CXB48_RS11790 PF01008 Initiation factor 2 subunit family CXB48_RS11805 PF02811 PHP domain CXB48_RS11805 PF01336 OB-fold nucleic acid binding domain CXB48_RS11805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CXB48_RS11805 PF14579 Helix-hairpin-helix motif CXB48_RS11805 PF07733 Bacterial DNA polymerase III alpha NTPase domain CXB48_RS11810 PF00665 Integrase core domain CXB48_RS11815 PF01695 IstB-like ATP binding protein CXB48_RS11830 PF13817 IS66 C-terminal element CXB48_RS11830 PF13007 Transposase C of IS166 homeodomain CXB48_RS11830 PF03050 Transposase IS66 family CXB48_RS11830 PF13005 zinc-finger binding domain of transposase IS66 CXB48_RS11880 PF01555 DNA methylase CXB48_RS11895 PF00216 Bacterial DNA-binding protein CXB48_RS11900 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CXB48_RS11900 PF03483 B3/4 domain CXB48_RS11900 PF03484 tRNA synthetase B5 domain CXB48_RS11900 PF01588 Putative tRNA binding domain CXB48_RS11900 PF03147 Ferredoxin-fold anticodon binding domain CXB48_RS11905 PF01409 tRNA synthetases class II core domain (F) CXB48_RS11905 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CXB48_RS11910 PF00453 Ribosomal protein L20 CXB48_RS11915 PF01632 Ribosomal protein L35 CXB48_RS11920 PF00707 Translation initiation factor IF-3, C-terminal domain CXB48_RS11920 PF05198 Translation initiation factor IF-3, N-terminal domain CXB48_RS11925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CXB48_RS11925 PF03129 Anticodon binding domain CXB48_RS11925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CXB48_RS11925 PF02824 TGS domain CXB48_RS11935 PF01266 FAD dependent oxidoreductase CXB48_RS11960 PF12804 MobA-like NTP transferase domain CXB48_RS11980 PF03573 outer membrane porin, OprD family CXB48_RS12000 PF01966 HD domain CXB48_RS12010 PF04320 Protein with unknown function (DUF469) CXB48_RS12015 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CXB48_RS12020 PF10672 S-adenosylmethionine-dependent methyltransferase CXB48_RS12020 PF02926 THUMP domain CXB48_RS12020 PF01170 Putative RNA methylase family UPF0020 CXB48_RS12025 PF04957 Ribosome modulation factor CXB48_RS12030 PF01180 Dihydroorotate dehydrogenase CXB48_RS12045 PF05088 Bacterial NAD-glutamate dehydrogenase CXB48_RS12050 PF07726 ATPase family associated with various cellular activities (AAA) CXB48_RS12050 PF17863 AAA lid domain CXB48_RS12055 PF01882 Protein of unknown function DUF58 CXB48_RS12085 PF03861 ANTAR domain CXB48_RS12085 PF08376 Nitrate and nitrite sensing CXB48_RS12100 PF00294 pfkB family carbohydrate kinase CXB48_RS12105 PF07690 Major Facilitator Superfamily CXB48_RS12110 PF00069 Protein kinase domain CXB48_RS12110 PF03793 PASTA domain CXB48_RS12120 PF18267 Rubredoxin NAD+ reductase C-terminal domain CXB48_RS12120 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS12120 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CXB48_RS12120 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CXB48_RS12120 PF04324 BFD-like [2Fe-2S] binding domain CXB48_RS12125 PF00355 Rieske [2Fe-2S] domain CXB48_RS12130 PF01568 Molydopterin dinucleotide binding domain CXB48_RS12130 PF00384 Molybdopterin oxidoreductase CXB48_RS12130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CXB48_RS12130 PF04324 BFD-like [2Fe-2S] binding domain CXB48_RS12135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CXB48_RS12145 PF14870 Photosynthesis system II assembly factor YCF48 CXB48_RS12150 PF01433 Peptidase family M1 domain CXB48_RS12150 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CXB48_RS12150 PF11940 Domain of unknown function (DUF3458) Ig-like fold CXB48_RS12165 PF01694 Rhomboid family CXB48_RS12165 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CXB48_RS12170 PF00149 Calcineurin-like phosphoesterase CXB48_RS12175 PF01513 ATP-NAD kinase CXB48_RS12190 PF01925 Sulfite exporter TauE/SafE CXB48_RS12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS12195 PF03466 LysR substrate binding domain CXB48_RS12205 PF17284 Spermidine synthase tetramerisation domain CXB48_RS12210 PF02805 Metal binding domain of Ada CXB48_RS12210 PF12833 Helix-turn-helix domain CXB48_RS12210 PF00730 HhH-GPD superfamily base excision DNA repair protein CXB48_RS12210 PF06029 AlkA N-terminal domain CXB48_RS12230 PF03079 ARD/ARD' family CXB48_RS12240 PF12832 MFS_1 like family CXB48_RS12245 PF01264 Chorismate synthase CXB48_RS12260 PF02264 LamB porin CXB48_RS12265 PF08402 TOBE domain CXB48_RS12265 PF00005 ABC transporter CXB48_RS12270 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS12275 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS12280 PF01547 Bacterial extracellular solute-binding protein CXB48_RS12285 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS12285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS12285 PF00672 HAMP domain CXB48_RS12290 PF00072 Response regulator receiver domain CXB48_RS12290 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS12295 PF02685 Glucokinase CXB48_RS12300 PF00920 Dehydratase family CXB48_RS12305 PF04079 Segregation and condensation complex subunit ScpB CXB48_RS12310 PF02616 Segregation and condensation protein ScpA CXB48_RS12315 PF00579 tRNA synthetases class I (W and Y) CXB48_RS12320 PF01300 Telomere recombination CXB48_RS12325 PF02811 PHP domain CXB48_RS12330 PF03795 YCII-related domain CXB48_RS12340 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS12340 PF00072 Response regulator receiver domain CXB48_RS12350 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS12350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS12350 PF00672 HAMP domain CXB48_RS12350 PF16750 Sensor domain of 2-component histidine kinase CXB48_RS12355 PF00881 Nitroreductase family CXB48_RS12360 PF03692 Putative zinc- or iron-chelating domain CXB48_RS12365 PF02386 Cation transport protein CXB48_RS12370 PF05661 Protein of unknown function (DUF808) CXB48_RS12375 PF12833 Helix-turn-helix domain CXB48_RS12375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CXB48_RS12385 PF00211 Adenylate and Guanylate cyclase catalytic domain CXB48_RS12390 PF12852 Cupin CXB48_RS12390 PF12833 Helix-turn-helix domain CXB48_RS12405 PF01734 Patatin-like phospholipase CXB48_RS12415 PF09382 RQC domain CXB48_RS12415 PF16124 RecQ zinc-binding CXB48_RS12415 PF00570 HRDC domain CXB48_RS12415 PF00271 Helicase conserved C-terminal domain CXB48_RS12415 PF00270 DEAD/DEAH box helicase CXB48_RS12425 PF04304 Protein of unknown function (DUF454) CXB48_RS12440 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CXB48_RS12450 PF00291 Pyridoxal-phosphate dependent enzyme CXB48_RS12460 PF02861 Clp amino terminal domain, pathogenicity island component CXB48_RS12460 PF10431 C-terminal, D2-small domain, of ClpB protein CXB48_RS12460 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS12460 PF07724 AAA domain (Cdc48 subfamily) CXB48_RS12460 PF17871 AAA lid domain CXB48_RS12480 PF13230 Glutamine amidotransferases class-II CXB48_RS12490 PF00582 Universal stress protein family CXB48_RS12500 PF12848 ABC transporter CXB48_RS12500 PF16326 ABC transporter C-terminal domain CXB48_RS12500 PF00005 ABC transporter CXB48_RS12505 PF14718 Soluble lytic murein transglycosylase L domain CXB48_RS12505 PF01464 Transglycosylase SLT domain CXB48_RS12510 PF03476 MOSC N-terminal beta barrel domain CXB48_RS12510 PF00111 2Fe-2S iron-sulfur cluster binding domain CXB48_RS12510 PF03473 MOSC domain CXB48_RS12515 PF00072 Response regulator receiver domain CXB48_RS12520 PF00781 Diacylglycerol kinase catalytic domain CXB48_RS12525 PF02397 Bacterial sugar transferase CXB48_RS12530 PF01451 Low molecular weight phosphotyrosine protein phosphatase CXB48_RS12535 PF02706 Chain length determinant protein CXB48_RS12535 PF13807 G-rich domain on putative tyrosine kinase CXB48_RS12535 PF13614 AAA domain CXB48_RS12540 PF00150 Cellulase (glycosyl hydrolase family 5) CXB48_RS12540 PF00553 Cellulose binding domain CXB48_RS12570 PF03808 Glycosyl transferase WecB/TagA/CpsF family CXB48_RS12575 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CXB48_RS12575 PF10531 SLBB domain CXB48_RS12575 PF02563 Polysaccharide biosynthesis/export protein CXB48_RS12580 PF00108 Thiolase, N-terminal domain CXB48_RS12580 PF02803 Thiolase, C-terminal domain CXB48_RS12585 PF03976 Polyphosphate kinase 2 (PPK2) CXB48_RS12590 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CXB48_RS12590 PF01648 4'-phosphopantetheinyl transferase superfamily CXB48_RS12600 PF02719 Polysaccharide biosynthesis protein CXB48_RS12605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CXB48_RS12610 PF12464 Maltose acetyltransferase CXB48_RS12610 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS12615 PF02397 Bacterial sugar transferase CXB48_RS12620 PF13439 Glycosyltransferase Family 4 CXB48_RS12620 PF00534 Glycosyl transferases group 1 CXB48_RS12640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CXB48_RS12640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CXB48_RS12640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CXB48_RS12645 PF02350 UDP-N-acetylglucosamine 2-epimerase CXB48_RS12655 PF02706 Chain length determinant protein CXB48_RS12660 PF02706 Chain length determinant protein CXB48_RS12660 PF13807 G-rich domain on putative tyrosine kinase CXB48_RS12660 PF13614 AAA domain CXB48_RS12665 PF00216 Bacterial DNA-binding protein CXB48_RS12670 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CXB48_RS12675 PF00271 Helicase conserved C-terminal domain CXB48_RS12675 PF00270 DEAD/DEAH box helicase CXB48_RS12675 PF03880 DbpA RNA binding domain CXB48_RS12680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS12690 PF01474 Class-II DAHP synthetase family CXB48_RS12695 PF00939 Sodium:sulfate symporter transmembrane region CXB48_RS12700 PF08207 Elongation factor P (EF-P) KOW-like domain CXB48_RS12700 PF01132 Elongation factor P (EF-P) OB domain CXB48_RS12700 PF09285 Elongation factor P, C-terminal CXB48_RS12715 PF01593 Flavin containing amine oxidoreductase CXB48_RS12720 PF01618 MotA/TolQ/ExbB proton channel family CXB48_RS12725 PF13677 Membrane MotB of proton-channel complex MotA/MotB CXB48_RS12725 PF00691 OmpA family CXB48_RS12730 PF02535 ZIP Zinc transporter CXB48_RS12740 PF02687 FtsX-like permease family CXB48_RS12740 PF12704 MacB-like periplasmic core domain CXB48_RS12745 PF00005 ABC transporter CXB48_RS12750 PF00753 Metallo-beta-lactamase superfamily CXB48_RS12760 PF00916 Sulfate permease family CXB48_RS12760 PF01740 STAS domain CXB48_RS12765 PF00581 Rhodanese-like domain CXB48_RS12780 PF04143 Sulphur transport CXB48_RS12820 PF00255 Glutathione peroxidase CXB48_RS12825 PF01641 SelR domain CXB48_RS12830 PF00155 Aminotransferase class I and II CXB48_RS12840 PF01435 Peptidase family M48 CXB48_RS12850 PF05724 Thiopurine S-methyltransferase (TPMT) CXB48_RS12855 PF02954 Bacterial regulatory protein, Fis family CXB48_RS12855 PF00072 Response regulator receiver domain CXB48_RS12855 PF00158 Sigma-54 interaction domain CXB48_RS12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS12860 PF13188 PAS domain CXB48_RS12860 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS12865 PF00158 Sigma-54 interaction domain CXB48_RS12865 PF02954 Bacterial regulatory protein, Fis family CXB48_RS12865 PF06490 Flagellar regulatory protein FleQ CXB48_RS12885 PF03918 Cytochrome C biogenesis protein CXB48_RS12890 PF08534 Redoxin CXB48_RS12895 PF01578 Cytochrome C assembly protein CXB48_RS12895 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CXB48_RS12900 PF03100 CcmE CXB48_RS12905 PF04995 Heme exporter protein D (CcmD) CXB48_RS12910 PF01578 Cytochrome C assembly protein CXB48_RS12915 PF03379 CcmB protein CXB48_RS12920 PF00005 ABC transporter CXB48_RS12930 PF01312 FlhB HrpN YscU SpaS Family CXB48_RS12945 PF01584 CheW-like domain CXB48_RS12955 PF13614 AAA domain CXB48_RS12960 PF00691 OmpA family CXB48_RS12960 PF13677 Membrane MotB of proton-channel complex MotA/MotB CXB48_RS12965 PF01618 MotA/TolQ/ExbB proton channel family CXB48_RS12970 PF00072 Response regulator receiver domain CXB48_RS12970 PF01339 CheB methylesterase CXB48_RS12975 PF00072 Response regulator receiver domain CXB48_RS12975 PF01627 Hpt domain CXB48_RS12975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS12975 PF02895 Signal transducing histidine kinase, homodimeric domain CXB48_RS12975 PF01584 CheW-like domain CXB48_RS12980 PF04344 Chemotaxis phosphatase, CheZ CXB48_RS12985 PF00072 Response regulator receiver domain CXB48_RS12990 PF04545 Sigma-70, region 4 CXB48_RS12990 PF04539 Sigma-70 region 3 CXB48_RS12990 PF04542 Sigma-70 region 2 CXB48_RS12995 PF10609 NUBPL iron-transfer P-loop NTPase CXB48_RS13000 PF00448 SRP54-type protein, GTPase domain CXB48_RS13005 PF00771 FHIPEP family CXB48_RS13010 PF00080 Copper/zinc superoxide dismutase (SODC) CXB48_RS13015 PF01312 FlhB HrpN YscU SpaS Family CXB48_RS13020 PF01311 Bacterial export proteins, family 1 CXB48_RS13025 PF01313 Bacterial export proteins, family 3 CXB48_RS13030 PF00813 FliP family CXB48_RS13035 PF04347 Flagellar biosynthesis protein, FliO CXB48_RS13040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CXB48_RS13045 PF02154 Flagellar motor switch protein FliM CXB48_RS13045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CXB48_RS13065 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS13065 PF00072 Response regulator receiver domain CXB48_RS13070 PF13466 STAS domain CXB48_RS13080 PF18269 T3SS EscN ATPase C-terminal domain CXB48_RS13080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CXB48_RS13090 PF14841 FliG middle domain CXB48_RS13090 PF01706 FliG C-terminal domain CXB48_RS13090 PF14842 FliG N-terminal domain CXB48_RS13095 PF01514 Secretory protein of YscJ/FliF family CXB48_RS13095 PF08345 Flagellar M-ring protein C-terminal CXB48_RS13100 PF02049 Flagellar hook-basal body complex protein FliE CXB48_RS13105 PF03594 Benzoate membrane transport protein CXB48_RS13115 PF16884 N-terminal domain of oxidoreductase CXB48_RS13115 PF00107 Zinc-binding dehydrogenase CXB48_RS13120 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CXB48_RS13130 PF13188 PAS domain CXB48_RS13130 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS13130 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS13130 PF00563 EAL domain CXB48_RS13140 PF00392 Bacterial regulatory proteins, gntR family CXB48_RS13140 PF00155 Aminotransferase class I and II CXB48_RS13145 PF00691 OmpA family CXB48_RS13145 PF05736 OprF membrane domain CXB48_RS13160 PF01012 Electron transfer flavoprotein domain CXB48_RS13160 PF00766 Electron transfer flavoprotein FAD-binding domain CXB48_RS13165 PF01012 Electron transfer flavoprotein domain CXB48_RS13190 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS13195 PF00266 Aminotransferase class-V CXB48_RS13200 PF00324 Amino acid permease CXB48_RS13205 PF01026 TatD related DNase CXB48_RS13215 PF09115 DNA polymerase III, delta subunit, C terminal CXB48_RS13220 PF02223 Thymidylate kinase CXB48_RS13225 PF02618 YceG-like family CXB48_RS13230 PF01063 Amino-transferase class IV CXB48_RS13235 PF00109 Beta-ketoacyl synthase, N-terminal domain CXB48_RS13235 PF02801 Beta-ketoacyl synthase, C-terminal domain CXB48_RS13240 PF00550 Phosphopantetheine attachment site CXB48_RS13250 PF00698 Acyl transferase domain CXB48_RS13255 PF02504 Fatty acid synthesis protein CXB48_RS13260 PF01783 Ribosomal L32p protein family CXB48_RS13265 PF02620 Large ribosomal RNA subunit accumulation protein YceD CXB48_RS13270 PF02545 Maf-like protein CXB48_RS13275 PF01343 Peptidase family S49 CXB48_RS13275 PF06965 Na+/H+ antiporter 1 CXB48_RS13280 PF13419 Haloacid dehalogenase-like hydrolase CXB48_RS13285 PF00849 RNA pseudouridylate synthase CXB48_RS13285 PF01479 S4 domain CXB48_RS13295 PF00575 S1 RNA binding domain CXB48_RS13295 PF10150 Ribonuclease E/G family CXB48_RS13295 PF12111 Polyribonucleotide phosphorylase C terminal CXB48_RS13300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CXB48_RS13300 PF01565 FAD binding domain CXB48_RS13305 PF01451 Low molecular weight phosphotyrosine protein phosphatase CXB48_RS13310 PF02348 Cytidylyltransferase CXB48_RS13315 PF03966 Trm112p-like protein CXB48_RS13320 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CXB48_RS13330 PF01618 MotA/TolQ/ExbB proton channel family CXB48_RS13335 PF00753 Metallo-beta-lactamase superfamily CXB48_RS13335 PF03772 Competence protein CXB48_RS13345 PF12704 MacB-like periplasmic core domain CXB48_RS13345 PF02687 FtsX-like permease family CXB48_RS13350 PF00005 ABC transporter CXB48_RS13355 PF02687 FtsX-like permease family CXB48_RS13355 PF12704 MacB-like periplasmic core domain CXB48_RS13370 PF03009 Glycerophosphoryl diester phosphodiesterase family CXB48_RS13375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS13375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXB48_RS13385 PF02424 ApbE family CXB48_RS13390 PF00970 Oxidoreductase FAD-binding domain CXB48_RS13390 PF00175 Oxidoreductase NAD-binding domain CXB48_RS13390 PF00111 2Fe-2S iron-sulfur cluster binding domain CXB48_RS13395 PF02508 Rnf-Nqr subunit, membrane protein CXB48_RS13400 PF02508 Rnf-Nqr subunit, membrane protein CXB48_RS13405 PF04205 FMN-binding domain CXB48_RS13410 PF03116 NQR2, RnfD, RnfE family CXB48_RS13415 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CXB48_RS13415 PF11973 NQRA C-terminal domain CXB48_RS13420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CXB48_RS13420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CXB48_RS13425 PF02559 CarD-like/TRCF domain CXB48_RS13425 PF17757 UvrB interaction domain CXB48_RS13425 PF03461 TRCF domain CXB48_RS13425 PF00271 Helicase conserved C-terminal domain CXB48_RS13425 PF00270 DEAD/DEAH box helicase CXB48_RS13435 PF00271 Helicase conserved C-terminal domain CXB48_RS13435 PF00176 SNF2 family N-terminal domain CXB48_RS13435 PF12419 SNF2 Helicase protein CXB48_RS13450 PF04675 DNA ligase N terminus CXB48_RS13450 PF01068 ATP dependent DNA ligase domain CXB48_RS13450 PF04679 ATP dependent DNA ligase C terminal region CXB48_RS13455 PF00271 Helicase conserved C-terminal domain CXB48_RS13455 PF08494 DEAD/H associated CXB48_RS13455 PF00270 DEAD/DEAH box helicase CXB48_RS13470 PF05139 Erythromycin esterase CXB48_RS13470 PF00156 Phosphoribosyl transferase domain CXB48_RS13480 PF03819 MazG nucleotide pyrophosphohydrolase domain CXB48_RS13485 PF13291 ACT domain CXB48_RS13485 PF04607 Region found in RelA / SpoT proteins CXB48_RS13485 PF02824 TGS domain CXB48_RS13490 PF05958 tRNA (Uracil-5-)-methyltransferase CXB48_RS13490 PF01938 TRAM domain CXB48_RS13495 PF00291 Pyridoxal-phosphate dependent enzyme CXB48_RS13500 PF03466 LysR substrate binding domain CXB48_RS13500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS13505 PF03458 UPF0126 domain CXB48_RS13510 PF00672 HAMP domain CXB48_RS13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS13510 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS13510 PF01627 Hpt domain CXB48_RS13510 PF00072 Response regulator receiver domain CXB48_RS13510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CXB48_RS13515 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CXB48_RS13515 PF01266 FAD dependent oxidoreductase CXB48_RS13525 PF01925 Sulfite exporter TauE/SafE CXB48_RS13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS13535 PF03466 LysR substrate binding domain CXB48_RS13550 PF00270 DEAD/DEAH box helicase CXB48_RS13550 PF00271 Helicase conserved C-terminal domain CXB48_RS13570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CXB48_RS13585 PF07396 Phosphate-selective porin O and P CXB48_RS13590 PF00899 ThiF family CXB48_RS13595 PF01546 Peptidase family M20/M25/M40 CXB48_RS13595 PF07687 Peptidase dimerisation domain CXB48_RS13600 PF13847 Methyltransferase domain CXB48_RS13610 PF00313 'Cold-shock' DNA-binding domain CXB48_RS13625 PF00005 ABC transporter CXB48_RS13640 PF00905 Penicillin binding protein transpeptidase domain CXB48_RS13655 PF01553 Acyltransferase CXB48_RS13660 PF00583 Acetyltransferase (GNAT) family CXB48_RS13670 PF13098 Thioredoxin-like domain CXB48_RS13675 PF08534 Redoxin CXB48_RS13680 PF00672 HAMP domain CXB48_RS13680 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS13680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS13685 PF00072 Response regulator receiver domain CXB48_RS13685 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS13690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXB48_RS13690 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS13690 PF00403 Heavy-metal-associated domain CXB48_RS13700 PF07731 Multicopper oxidase CXB48_RS13700 PF00394 Multicopper oxidase CXB48_RS13700 PF07732 Multicopper oxidase CXB48_RS13710 PF05275 Copper resistance protein B precursor (CopB) CXB48_RS13725 PF00583 Acetyltransferase (GNAT) family CXB48_RS13730 PF03358 NADPH-dependent FMN reductase CXB48_RS13735 PF02678 Pirin CXB48_RS13735 PF17954 Quercetinase C-terminal cupin domain CXB48_RS13740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CXB48_RS13745 PF00535 Glycosyl transferase family 2 CXB48_RS13750 PF04349 Periplasmic glucan biosynthesis protein, MdoG CXB48_RS13755 PF00933 Glycosyl hydrolase family 3 N terminal domain CXB48_RS13755 PF14310 Fibronectin type III-like domain CXB48_RS13755 PF01915 Glycosyl hydrolase family 3 C-terminal domain CXB48_RS13760 PF02567 Phenazine biosynthesis-like protein CXB48_RS13765 PF04172 LrgB-like family CXB48_RS13770 PF03788 LrgA family CXB48_RS13775 PF12801 4Fe-4S binding domain CXB48_RS13775 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CXB48_RS13775 PF13746 4Fe-4S dicluster domain CXB48_RS13780 PF00155 Aminotransferase class I and II CXB48_RS13780 PF00392 Bacterial regulatory proteins, gntR family CXB48_RS13785 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS13785 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS13785 PF00563 EAL domain CXB48_RS13800 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS13805 PF00873 AcrB/AcrD/AcrF family CXB48_RS13810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CXB48_RS14025 PF13392 HNH endonuclease CXB48_RS14050 PF00772 DnaB-like helicase N terminal domain CXB48_RS14050 PF03796 DnaB-like helicase C terminal domain CXB48_RS14065 PF00717 Peptidase S24-like CXB48_RS14065 PF01381 Helix-turn-helix CXB48_RS14120 PF12684 PDDEXK-like domain of unknown function (DUF3799) CXB48_RS14120 PF06630 Enterobacterial exodeoxyribonuclease VIII CXB48_RS14125 PF03837 RecT family CXB48_RS14155 PF06442 R67 dihydrofolate reductase CXB48_RS14180 PF12167 Arm DNA-binding domain CXB48_RS14180 PF00589 Phage integrase family CXB48_RS14185 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS14185 PF08361 MAATS-type transcriptional repressor, C-terminal region CXB48_RS14190 PF04445 Putative SAM-dependent methyltransferase CXB48_RS14210 PF00814 Glycoprotease family CXB48_RS14215 PF05191 Adenylate kinase, active site lid CXB48_RS14220 PF00311 Phosphoenolpyruvate carboxylase CXB48_RS14235 PF05736 OprF membrane domain CXB48_RS14235 PF00691 OmpA family CXB48_RS14260 PF01336 OB-fold nucleic acid binding domain CXB48_RS14260 PF00152 tRNA synthetases class II (D, K and N) CXB48_RS14275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CXB48_RS14280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CXB48_RS14280 PF00384 Molybdopterin oxidoreductase CXB48_RS14280 PF01568 Molydopterin dinucleotide binding domain CXB48_RS14285 PF17768 RecJ OB domain CXB48_RS14285 PF02272 DHHA1 domain CXB48_RS14285 PF01368 DHH family CXB48_RS14295 PF03746 LamB/YcsF family CXB48_RS14300 PF02682 Carboxyltransferase domain, subdomain C and D CXB48_RS14305 PF02626 Carboxyltransferase domain, subdomain A and B CXB48_RS14310 PF07286 Protein of unknown function (DUF1445) CXB48_RS14315 PF01566 Natural resistance-associated macrophage protein CXB48_RS14320 PF07152 YaeQ protein CXB48_RS14325 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS14325 PF00072 Response regulator receiver domain CXB48_RS14330 PF04324 BFD-like [2Fe-2S] binding domain CXB48_RS14335 PF00210 Ferritin-like domain CXB48_RS14340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CXB48_RS14340 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CXB48_RS14355 PF04381 Putative exonuclease, RdgC CXB48_RS14360 PF07690 Major Facilitator Superfamily CXB48_RS14380 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS14380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS14385 PF13194 Domain of unknown function (DUF4010) CXB48_RS14390 PF02646 RmuC family CXB48_RS14405 PF13617 YnbE-like lipoprotein CXB48_RS14420 PF03104 DNA polymerase family B, exonuclease domain CXB48_RS14420 PF00136 DNA polymerase family B CXB48_RS14430 PF01259 SAICAR synthetase CXB48_RS14440 PF00701 Dihydrodipicolinate synthetase family CXB48_RS14450 PF00578 AhpC/TSA family CXB48_RS14455 PF01594 AI-2E family transporter CXB48_RS14460 PF01206 Sulfurtransferase TusA CXB48_RS14465 PF01435 Peptidase family M48 CXB48_RS14470 PF02445 Quinolinate synthetase A protein CXB48_RS14475 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CXB48_RS14475 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CXB48_RS14490 PF06508 Queuosine biosynthesis protein QueC CXB48_RS14495 PF04055 Radical SAM superfamily CXB48_RS14500 PF16331 TolA binding protein trimerisation CXB48_RS14500 PF13525 Outer membrane lipoprotein CXB48_RS14505 PF00691 OmpA family CXB48_RS14510 PF07676 WD40-like Beta Propeller Repeat CXB48_RS14510 PF04052 TolB amino-terminal domain CXB48_RS14520 PF02472 Biopolymer transport protein ExbD/TolR CXB48_RS14525 PF01618 MotA/TolQ/ExbB proton channel family CXB48_RS14530 PF03061 Thioesterase superfamily CXB48_RS14535 PF17864 RuvB AAA lid domain CXB48_RS14535 PF05496 Holliday junction DNA helicase RuvB P-loop domain CXB48_RS14535 PF05491 RuvB C-terminal winged helix domain CXB48_RS14540 PF07499 RuvA, C-terminal domain CXB48_RS14540 PF01330 RuvA N terminal domain CXB48_RS14545 PF02075 Crossover junction endodeoxyribonuclease RuvC CXB48_RS14550 PF01709 Transcriptional regulator CXB48_RS14555 PF01336 OB-fold nucleic acid binding domain CXB48_RS14555 PF00152 tRNA synthetases class II (D, K and N) CXB48_RS14555 PF02938 GAD domain CXB48_RS14560 PF00210 Ferritin-like domain CXB48_RS14565 PF00313 'Cold-shock' DNA-binding domain CXB48_RS14570 PF04102 SlyX CXB48_RS14585 PF03573 outer membrane porin, OprD family CXB48_RS14600 PF05275 Copper resistance protein B precursor (CopB) CXB48_RS14615 PF03129 Anticodon binding domain CXB48_RS14615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CXB48_RS14615 PF04073 Aminoacyl-tRNA editing domain CXB48_RS14630 PF00578 AhpC/TSA family CXB48_RS14645 PF03631 Virulence factor BrkB CXB48_RS14650 PF03960 ArsC family CXB48_RS14655 PF03358 NADPH-dependent FMN reductase CXB48_RS14665 PF00308 Bacterial dnaA protein CXB48_RS14670 PF01594 AI-2E family transporter CXB48_RS14680 PF02769 AIR synthase related protein, C-terminal domain CXB48_RS14680 PF00586 AIR synthase related protein, N-terminal domain CXB48_RS14685 PF00551 Formyl transferase CXB48_RS14700 PF00155 Aminotransferase class I and II CXB48_RS14715 PF03960 ArsC family CXB48_RS14720 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CXB48_RS14720 PF14602 Hexapeptide repeat of succinyl-transferase CXB48_RS14725 PF00266 Aminotransferase class-V CXB48_RS14730 PF02657 Fe-S metabolism associated domain CXB48_RS14735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CXB48_RS14735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CXB48_RS14740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXB48_RS14745 PF00034 Cytochrome c CXB48_RS14755 PF12843 Putative quorum-sensing-regulated virulence factor CXB48_RS14760 PF00023 Ankyrin repeat CXB48_RS14760 PF12796 Ankyrin repeats (3 copies) CXB48_RS14765 PF04073 Aminoacyl-tRNA editing domain CXB48_RS14770 PF01266 FAD dependent oxidoreductase CXB48_RS14770 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CXB48_RS14775 PF01717 Cobalamin-independent synthase, Catalytic domain CXB48_RS14775 PF08267 Cobalamin-independent synthase, N-terminal domain CXB48_RS14780 PF06055 Exopolysaccharide synthesis, ExoD CXB48_RS14785 PF03466 LysR substrate binding domain CXB48_RS14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS14790 PF00106 short chain dehydrogenase CXB48_RS14800 PF01810 LysE type translocator CXB48_RS14820 PF03783 Curli production assembly/transport component CsgG CXB48_RS14840 PF08362 YcdC-like protein, C-terminal region CXB48_RS14840 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS14845 PF03466 LysR substrate binding domain CXB48_RS14845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS14850 PF08443 RimK-like ATP-grasp domain CXB48_RS14850 PF18030 RimK PreATP-grasp domain CXB48_RS14860 PF02926 THUMP domain CXB48_RS14860 PF01170 Putative RNA methylase family UPF0020 CXB48_RS14860 PF10672 S-adenosylmethionine-dependent methyltransferase CXB48_RS14865 PF10996 Beta-Casp domain CXB48_RS14865 PF00753 Metallo-beta-lactamase superfamily CXB48_RS14865 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CXB48_RS14880 PF08659 KR domain CXB48_RS14880 PF00550 Phosphopantetheine attachment site CXB48_RS14880 PF14765 Polyketide synthase dehydratase CXB48_RS14880 PF00109 Beta-ketoacyl synthase, N-terminal domain CXB48_RS14880 PF16197 Ketoacyl-synthetase C-terminal extension CXB48_RS14880 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS14880 PF00698 Acyl transferase domain CXB48_RS14880 PF02801 Beta-ketoacyl synthase, C-terminal domain CXB48_RS14890 PF01590 GAF domain CXB48_RS14890 PF02954 Bacterial regulatory protein, Fis family CXB48_RS14890 PF00158 Sigma-54 interaction domain CXB48_RS14900 PF00732 GMC oxidoreductase CXB48_RS14900 PF05199 GMC oxidoreductase CXB48_RS14905 PF00676 Dehydrogenase E1 component CXB48_RS14910 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS14910 PF00107 Zinc-binding dehydrogenase CXB48_RS14915 PF02780 Transketolase, C-terminal domain CXB48_RS14915 PF02779 Transketolase, pyrimidine binding domain CXB48_RS14920 PF02817 e3 binding domain CXB48_RS14920 PF00364 Biotin-requiring enzyme CXB48_RS14920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CXB48_RS14925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CXB48_RS14925 PF00364 Biotin-requiring enzyme CXB48_RS14925 PF02817 e3 binding domain CXB48_RS14935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXB48_RS14935 PF13360 PQQ-like domain CXB48_RS14940 PF04966 Carbohydrate-selective porin, OprB family CXB48_RS14950 PF00106 short chain dehydrogenase CXB48_RS14955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS14955 PF03466 LysR substrate binding domain CXB48_RS14960 PF02798 Glutathione S-transferase, N-terminal domain CXB48_RS14965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CXB48_RS14970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS14970 PF03466 LysR substrate binding domain CXB48_RS14985 PF00916 Sulfate permease family CXB48_RS14985 PF01740 STAS domain CXB48_RS14995 PF00550 Phosphopantetheine attachment site CXB48_RS15005 PF03062 MBOAT, membrane-bound O-acyltransferase family CXB48_RS15025 PF13005 zinc-finger binding domain of transposase IS66 CXB48_RS15025 PF13817 IS66 C-terminal element CXB48_RS15025 PF13007 Transposase C of IS166 homeodomain CXB48_RS15025 PF03050 Transposase IS66 family CXB48_RS15040 PF01810 LysE type translocator CXB48_RS15045 PF08448 PAS fold CXB48_RS15045 PF13188 PAS domain CXB48_RS15045 PF00072 Response regulator receiver domain CXB48_RS15045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS15045 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS15060 PF06745 KaiC CXB48_RS15065 PF08448 PAS fold CXB48_RS15065 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS15065 PF00072 Response regulator receiver domain CXB48_RS15065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS15065 PF13188 PAS domain CXB48_RS15070 PF13619 KTSC domain CXB48_RS15075 PF00005 ABC transporter CXB48_RS15075 PF00664 ABC transporter transmembrane region CXB48_RS15085 PF03275 UDP-galactopyranose mutase CXB48_RS15095 PF16363 GDP-mannose 4,6 dehydratase CXB48_RS15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS15105 PF03466 LysR substrate binding domain CXB48_RS15110 PF00291 Pyridoxal-phosphate dependent enzyme CXB48_RS15115 PF00290 Tryptophan synthase alpha chain CXB48_RS15130 PF09084 NMT1/THI5 like CXB48_RS15135 PF00005 ABC transporter CXB48_RS15140 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS15150 PF00106 short chain dehydrogenase CXB48_RS15160 PF12833 Helix-turn-helix domain CXB48_RS15160 PF06719 AraC-type transcriptional regulator N-terminus CXB48_RS15165 PF00005 ABC transporter CXB48_RS15170 PF02653 Branched-chain amino acid transport system / permease component CXB48_RS15175 PF02653 Branched-chain amino acid transport system / permease component CXB48_RS15200 PF00375 Sodium:dicarboxylate symporter family CXB48_RS15210 PF01131 DNA topoisomerase CXB48_RS15210 PF01751 Toprim domain CXB48_RS15215 PF01272 Transcription elongation factor, GreA/GreB, C-term CXB48_RS15215 PF03449 Transcription elongation factor, N-terminal CXB48_RS15225 PF03600 Citrate transporter CXB48_RS15225 PF02080 TrkA-C domain CXB48_RS15230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS15230 PF00672 HAMP domain CXB48_RS15235 PF07690 Major Facilitator Superfamily CXB48_RS15245 PF09828 Chromate resistance exported protein CXB48_RS15255 PF00364 Biotin-requiring enzyme CXB48_RS15255 PF00561 alpha/beta hydrolase fold CXB48_RS15260 PF12729 Four helix bundle sensory module for signal transduction CXB48_RS15260 PF00672 HAMP domain CXB48_RS15260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS15275 PF12833 Helix-turn-helix domain CXB48_RS15280 PF01810 LysE type translocator CXB48_RS15295 PF00672 HAMP domain CXB48_RS15295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS15305 PF04286 Protein of unknown function (DUF445) CXB48_RS15310 PF00005 ABC transporter CXB48_RS15325 PF01230 HIT domain CXB48_RS15330 PF01546 Peptidase family M20/M25/M40 CXB48_RS15330 PF07687 Peptidase dimerisation domain CXB48_RS15335 PF03473 MOSC domain CXB48_RS15335 PF03475 3-alpha domain CXB48_RS15350 PF03795 YCII-related domain CXB48_RS15365 PF03600 Citrate transporter CXB48_RS15375 PF00753 Metallo-beta-lactamase superfamily CXB48_RS15380 PF01738 Dienelactone hydrolase family CXB48_RS15385 PF00561 alpha/beta hydrolase fold CXB48_RS15390 PF07883 Cupin domain CXB48_RS15390 PF05899 Protein of unknown function (DUF861) CXB48_RS15395 PF01728 FtsJ-like methyltransferase CXB48_RS15405 PF08032 RNA 2'-O ribose methyltransferase substrate binding CXB48_RS15405 PF00588 SpoU rRNA Methylase family CXB48_RS15415 PF03793 PASTA domain CXB48_RS15415 PF00069 Protein kinase domain CXB48_RS15420 PF16697 Inner membrane component of T3SS, cytoplasmic domain CXB48_RS15430 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CXB48_RS15430 PF04408 Helicase associated domain (HA2) CXB48_RS15430 PF00271 Helicase conserved C-terminal domain CXB48_RS15430 PF11898 Domain of unknown function (DUF3418) CXB48_RS15430 PF00270 DEAD/DEAH box helicase CXB48_RS15435 PF04389 Peptidase family M28 CXB48_RS15435 PF02225 PA domain CXB48_RS15440 PF00672 HAMP domain CXB48_RS15440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS15440 PF17200 Single Cache domain 2 CXB48_RS15445 PF17200 Single Cache domain 2 CXB48_RS15445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS15445 PF00672 HAMP domain CXB48_RS15450 PF13193 AMP-binding enzyme C-terminal domain CXB48_RS15450 PF00501 AMP-binding enzyme CXB48_RS15455 PF00501 AMP-binding enzyme CXB48_RS15455 PF13193 AMP-binding enzyme C-terminal domain CXB48_RS15460 PF01575 MaoC like domain CXB48_RS15465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CXB48_RS15465 PF11852 Domain of unknown function (DUF3372) CXB48_RS15465 PF17967 Pullulanase N2 domain CXB48_RS15465 PF03714 Bacterial pullanase-associated domain CXB48_RS15465 PF18494 Pullulanase Ins domain CXB48_RS15485 PF12137 RNA polymerase recycling family C-terminal CXB48_RS15485 PF00271 Helicase conserved C-terminal domain CXB48_RS15485 PF00176 SNF2 family N-terminal domain CXB48_RS15485 PF18339 RapA N-terminal Tudor like domain 1 CXB48_RS15485 PF18337 RapA N-terminal Tudor like domain CXB48_RS15495 PF00012 Hsp70 protein CXB48_RS15500 PF07690 Major Facilitator Superfamily CXB48_RS15505 PF01261 Xylose isomerase-like TIM barrel CXB48_RS15510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CXB48_RS15510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CXB48_RS15515 PF02673 Bacitracin resistance protein BacA CXB48_RS15530 PF00005 ABC transporter CXB48_RS15535 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS15540 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS15550 PF13458 Periplasmic binding protein CXB48_RS15555 PF02653 Branched-chain amino acid transport system / permease component CXB48_RS15560 PF11862 Domain of unknown function (DUF3382) CXB48_RS15560 PF02653 Branched-chain amino acid transport system / permease component CXB48_RS15565 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXB48_RS15565 PF00005 ABC transporter CXB48_RS15570 PF00005 ABC transporter CXB48_RS15590 PF11798 IMS family HHH motif CXB48_RS15590 PF00817 impB/mucB/samB family CXB48_RS15605 PF01610 Transposase CXB48_RS15605 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS15605 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS15630 PF00749 tRNA synthetases class I (E and Q), catalytic domain CXB48_RS15635 PF00271 Helicase conserved C-terminal domain CXB48_RS15635 PF04851 Type III restriction enzyme, res subunit CXB48_RS15635 PF02151 UvrB/uvrC motif CXB48_RS15635 PF12344 Ultra-violet resistance protein B CXB48_RS15635 PF17757 UvrB interaction domain CXB48_RS15640 PF00155 Aminotransferase class I and II CXB48_RS15655 PF00462 Glutaredoxin CXB48_RS15660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CXB48_RS15660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CXB48_RS15665 PF08402 TOBE domain CXB48_RS15665 PF00005 ABC transporter CXB48_RS15670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CXB48_RS15675 PF00394 Multicopper oxidase CXB48_RS15675 PF07731 Multicopper oxidase CXB48_RS15675 PF07732 Multicopper oxidase CXB48_RS15680 PF00117 Glutamine amidotransferase class-I CXB48_RS15680 PF02540 NAD synthase CXB48_RS15680 PF00958 GMP synthase C terminal domain CXB48_RS15685 PF00478 IMP dehydrogenase / GMP reductase domain CXB48_RS15685 PF00571 CBS domain CXB48_RS15695 PF13742 OB-fold nucleic acid binding domain CXB48_RS15695 PF02601 Exonuclease VII, large subunit CXB48_RS15700 PF01551 Peptidase family M23 CXB48_RS15700 PF08525 Opacity-associated protein A N-terminal motif CXB48_RS15700 PF01476 LysM domain CXB48_RS15710 PF00924 Mechanosensitive ion channel CXB48_RS15725 PF00682 HMGL-like CXB48_RS15725 PF08502 LeuA allosteric (dimerisation) domain CXB48_RS15730 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS15730 PF00107 Zinc-binding dehydrogenase CXB48_RS15735 PF00892 EamA-like transporter family CXB48_RS15740 PF04231 Endonuclease I CXB48_RS15745 PF09997 Predicted membrane protein (DUF2238) CXB48_RS15760 PF13520 Amino acid permease CXB48_RS15765 PF00795 Carbon-nitrogen hydrolase CXB48_RS15770 PF00155 Aminotransferase class I and II CXB48_RS15775 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS15775 PF06426 Serine acetyltransferase, N-terminal CXB48_RS15780 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CXB48_RS15780 PF01926 50S ribosome-binding GTPase CXB48_RS15785 PF13360 PQQ-like domain CXB48_RS15790 PF09976 Tetratricopeptide repeat-like domain CXB48_RS15795 PF13393 Histidyl-tRNA synthetase CXB48_RS15795 PF03129 Anticodon binding domain CXB48_RS15800 PF04551 GcpE protein CXB48_RS15815 PF04055 Radical SAM superfamily CXB48_RS15820 PF00334 Nucleoside diphosphate kinase CXB48_RS15825 PF04384 Iron-sulphur cluster assembly CXB48_RS15830 PF00111 2Fe-2S iron-sulfur cluster binding domain CXB48_RS15835 PF00012 Hsp70 protein CXB48_RS15840 PF00226 DnaJ domain CXB48_RS15840 PF07743 HSCB C-terminal oligomerisation domain CXB48_RS15845 PF01521 Iron-sulphur cluster biosynthesis CXB48_RS15850 PF01592 NifU-like N terminal domain CXB48_RS15855 PF00266 Aminotransferase class-V CXB48_RS15860 PF02082 Transcriptional regulator CXB48_RS15865 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS15870 PF00588 SpoU rRNA Methylase family CXB48_RS15875 PF00459 Inositol monophosphatase family CXB48_RS15880 PF05433 Glycine zipper 2TM domain CXB48_RS15885 PF07549 SecD/SecF GG Motif CXB48_RS15885 PF02355 Protein export membrane protein CXB48_RS15890 PF02355 Protein export membrane protein CXB48_RS15890 PF07549 SecD/SecF GG Motif CXB48_RS15890 PF13721 SecD export protein N-terminal TM region CXB48_RS15895 PF02699 Preprotein translocase subunit CXB48_RS15900 PF01702 Queuine tRNA-ribosyltransferase CXB48_RS15905 PF02547 Queuosine biosynthesis protein CXB48_RS15915 PF00313 'Cold-shock' DNA-binding domain CXB48_RS15925 PF03739 Lipopolysaccharide export system permease LptF/LptG CXB48_RS15930 PF03739 Lipopolysaccharide export system permease LptF/LptG CXB48_RS15935 PF00883 Cytosol aminopeptidase family, catalytic domain CXB48_RS15935 PF02789 Cytosol aminopeptidase family, N-terminal domain CXB48_RS15940 PF04364 DNA polymerase III chi subunit, HolC CXB48_RS15950 PF10458 Valyl tRNA synthetase tRNA binding arm CXB48_RS15950 PF08264 Anticodon-binding domain of tRNA CXB48_RS15950 PF00133 tRNA synthetases class I (I, L, M and V) CXB48_RS15955 PF03600 Citrate transporter CXB48_RS15965 PF02080 TrkA-C domain CXB48_RS15965 PF03600 Citrate transporter CXB48_RS15970 PF06779 Uncharacterised MFS-type transporter YbfB CXB48_RS15975 PF05971 RNA methyltransferase CXB48_RS15985 PF07690 Major Facilitator Superfamily CXB48_RS15995 PF04245 37-kD nucleoid-associated bacterial protein CXB48_RS16000 PF03976 Polyphosphate kinase 2 (PPK2) CXB48_RS16015 PF01541 GIY-YIG catalytic domain CXB48_RS16020 PF01464 Transglycosylase SLT domain CXB48_RS16020 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXB48_RS16025 PF00689 Cation transporting ATPase, C-terminus CXB48_RS16025 PF00690 Cation transporter/ATPase, N-terminus CXB48_RS16035 PF01979 Amidohydrolase family CXB48_RS16040 PF02608 ABC transporter substrate-binding protein PnrA-like CXB48_RS16045 PF14226 non-haem dioxygenase in morphine synthesis N-terminal CXB48_RS16045 PF03171 2OG-Fe(II) oxygenase superfamily CXB48_RS16050 PF00111 2Fe-2S iron-sulfur cluster binding domain CXB48_RS16050 PF01799 [2Fe-2S] binding domain CXB48_RS16055 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CXB48_RS16055 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CXB48_RS16065 PF01979 Amidohydrolase family CXB48_RS16070 PF01297 Zinc-uptake complex component A periplasmic CXB48_RS16075 PF00950 ABC 3 transport family CXB48_RS16080 PF00005 ABC transporter CXB48_RS16085 PF00392 Bacterial regulatory proteins, gntR family CXB48_RS16085 PF07729 FCD domain CXB48_RS16090 PF00860 Permease family CXB48_RS16100 PF00576 HIUase/Transthyretin family CXB48_RS16105 PF01522 Polysaccharide deacetylase CXB48_RS16110 PF01014 Uricase CXB48_RS16110 PF09349 OHCU decarboxylase CXB48_RS16115 PF03561 Allantoicase repeat CXB48_RS16120 PF04115 Ureidoglycolate lyase CXB48_RS16130 PF00860 Permease family CXB48_RS16135 PF02254 TrkA-N domain CXB48_RS16135 PF00999 Sodium/hydrogen exchanger family CXB48_RS16140 PF00860 Permease family CXB48_RS16155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS16155 PF00672 HAMP domain CXB48_RS16155 PF02743 Cache domain CXB48_RS16160 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS16160 PF08362 YcdC-like protein, C-terminal region CXB48_RS16170 PF13533 Biotin-lipoyl like CXB48_RS16175 PF02321 Outer membrane efflux protein CXB48_RS16180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CXB48_RS16190 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS16190 PF00563 EAL domain CXB48_RS16190 PF13188 PAS domain CXB48_RS16190 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS16195 PF03372 Endonuclease/Exonuclease/phosphatase family CXB48_RS16200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS16200 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS16200 PF00672 HAMP domain CXB48_RS16205 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS16205 PF00072 Response regulator receiver domain CXB48_RS16215 PF00576 HIUase/Transthyretin family CXB48_RS16220 PF03466 LysR substrate binding domain CXB48_RS16220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS16230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXB48_RS16230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXB48_RS16230 PF00205 Thiamine pyrophosphate enzyme, central domain CXB48_RS16235 PF01261 Xylose isomerase-like TIM barrel CXB48_RS16240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CXB48_RS16240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CXB48_RS16245 PF05161 MOFRL family CXB48_RS16245 PF13660 Domain of unknown function (DUF4147) CXB48_RS16250 PF02887 Pyruvate kinase, alpha/beta domain CXB48_RS16250 PF00224 Pyruvate kinase, barrel domain CXB48_RS16255 PF03253 Urea transporter CXB48_RS16265 PF00175 Oxidoreductase NAD-binding domain CXB48_RS16265 PF00042 Globin CXB48_RS16265 PF00970 Oxidoreductase FAD-binding domain CXB48_RS16280 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CXB48_RS16280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CXB48_RS16285 PF05230 MASE2 domain CXB48_RS16285 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS16290 PF03797 Autotransporter beta-domain CXB48_RS16290 PF00657 GDSL-like Lipase/Acylhydrolase CXB48_RS16305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS16305 PF03466 LysR substrate binding domain CXB48_RS16310 PF01810 LysE type translocator CXB48_RS16315 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CXB48_RS16315 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CXB48_RS16320 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS16320 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS16320 PF00563 EAL domain CXB48_RS16335 PF04011 LemA family CXB48_RS16360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS16360 PF00672 HAMP domain CXB48_RS16365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CXB48_RS16370 PF00873 AcrB/AcrD/AcrF family CXB48_RS16380 PF00118 TCP-1/cpn60 chaperonin family CXB48_RS16385 PF00166 Chaperonin 10 Kd subunit CXB48_RS16390 PF04186 FxsA cytoplasmic membrane protein CXB48_RS16415 PF07690 Major Facilitator Superfamily CXB48_RS16420 PF00924 Mechanosensitive ion channel CXB48_RS16420 PF05552 Conserved TM helix CXB48_RS16425 PF04461 Protein of unknown function (DUF520) CXB48_RS16430 PF00072 Response regulator receiver domain CXB48_RS16435 PF02558 Ketopantoate reductase PanE/ApbA CXB48_RS16435 PF08546 Ketopantoate reductase PanE/ApbA C terminal CXB48_RS16440 PF08447 PAS fold CXB48_RS16440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS16440 PF08448 PAS fold CXB48_RS16445 PF01923 Cobalamin adenosyltransferase CXB48_RS16465 PF13192 Thioredoxin domain CXB48_RS16465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS16470 PF10417 C-terminal domain of 1-Cys peroxiredoxin CXB48_RS16470 PF00578 AhpC/TSA family CXB48_RS16475 PF00293 NUDIX domain CXB48_RS16485 PF01960 ArgJ family CXB48_RS16490 PF01043 SecA preprotein cross-linking domain CXB48_RS16490 PF07517 SecA DEAD-like domain CXB48_RS16490 PF02810 SEC-C motif CXB48_RS16490 PF07516 SecA Wing and Scaffold domain CXB48_RS16515 PF00196 Bacterial regulatory proteins, luxR family CXB48_RS16525 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS16525 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS16525 PF01610 Transposase CXB48_RS16530 PF07044 Protein of unknown function (DUF1329) CXB48_RS16540 PF00156 Phosphoribosyl transferase domain CXB48_RS16550 PF00860 Permease family CXB48_RS16560 PF09411 Lipid A 3-O-deacylase (PagL) CXB48_RS16565 PF01177 Asp/Glu/Hydantoin racemase CXB48_RS16570 PF00899 ThiF family CXB48_RS16575 PF17827 PrmC N-terminal domain CXB48_RS16575 PF05175 Methyltransferase small domain CXB48_RS16580 PF00472 RF-1 domain CXB48_RS16580 PF03462 PCRF domain CXB48_RS16585 PF01488 Shikimate / quinate 5-dehydrogenase CXB48_RS16585 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CXB48_RS16585 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CXB48_RS16595 PF03550 Outer membrane lipoprotein LolB CXB48_RS16600 PF00288 GHMP kinases N terminal domain CXB48_RS16600 PF08544 GHMP kinases C terminal CXB48_RS16615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CXB48_RS16615 PF14572 Phosphoribosyl synthetase-associated domain CXB48_RS16620 PF14693 Ribosomal protein TL5, C-terminal domain CXB48_RS16620 PF01386 Ribosomal L25p family CXB48_RS16625 PF01195 Peptidyl-tRNA hydrolase CXB48_RS16630 PF06071 Protein of unknown function (DUF933) CXB48_RS16630 PF01926 50S ribosome-binding GTPase CXB48_RS16635 PF00589 Phage integrase family CXB48_RS16635 PF13356 Arm DNA-binding domain CXB48_RS16645 PF08463 EcoEI R protein C-terminal CXB48_RS16645 PF00271 Helicase conserved C-terminal domain CXB48_RS16645 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CXB48_RS16645 PF04851 Type III restriction enzyme, res subunit CXB48_RS16650 PF02384 N-6 DNA Methylase CXB48_RS16650 PF12161 HsdM N-terminal domain CXB48_RS16685 PF02653 Branched-chain amino acid transport system / permease component CXB48_RS16695 PF00005 ABC transporter CXB48_RS16700 PF00005 ABC transporter CXB48_RS16700 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXB48_RS16720 PF03851 UV-endonuclease UvdE CXB48_RS16725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS16725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS16725 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS16730 PF01039 Carboxyl transferase domain CXB48_RS16735 PF00378 Enoyl-CoA hydratase/isomerase CXB48_RS16740 PF00289 Biotin carboxylase, N-terminal domain CXB48_RS16740 PF02785 Biotin carboxylase C-terminal domain CXB48_RS16740 PF00364 Biotin-requiring enzyme CXB48_RS16740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CXB48_RS16745 PF00682 HMGL-like CXB48_RS16750 PF01144 Coenzyme A transferase CXB48_RS16755 PF01144 Coenzyme A transferase CXB48_RS16760 PF02803 Thiolase, C-terminal domain CXB48_RS16760 PF00108 Thiolase, N-terminal domain CXB48_RS16765 PF13411 MerR HTH family regulatory protein CXB48_RS16770 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS16780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXB48_RS16785 PF02954 Bacterial regulatory protein, Fis family CXB48_RS16785 PF13185 GAF domain CXB48_RS16785 PF00158 Sigma-54 interaction domain CXB48_RS16795 PF07519 Tannase and feruloyl esterase CXB48_RS16800 PF03573 outer membrane porin, OprD family CXB48_RS16810 PF00145 C-5 cytosine-specific DNA methylase CXB48_RS16815 PF03852 DNA mismatch endonuclease Vsr CXB48_RS16845 PF00484 Carbonic anhydrase CXB48_RS16850 PF00982 Glycosyltransferase family 20 CXB48_RS16855 PF02358 Trehalose-phosphatase CXB48_RS16865 PF00583 Acetyltransferase (GNAT) family CXB48_RS16875 PF08502 LeuA allosteric (dimerisation) domain CXB48_RS16875 PF00682 HMGL-like CXB48_RS16880 PF03466 LysR substrate binding domain CXB48_RS16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS16895 PF03600 Citrate transporter CXB48_RS16900 PF16653 Saccharopine dehydrogenase C-terminal domain CXB48_RS16900 PF03435 Saccharopine dehydrogenase NADP binding domain CXB48_RS16905 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CXB48_RS16925 PF02470 MlaD protein CXB48_RS16930 PF04403 Paraquat-inducible protein A CXB48_RS16935 PF04403 Paraquat-inducible protein A CXB48_RS16970 PF01794 Ferric reductase like transmembrane component CXB48_RS16975 PF00174 Oxidoreductase molybdopterin binding domain CXB48_RS16980 PF01066 CDP-alcohol phosphatidyltransferase CXB48_RS16985 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CXB48_RS16985 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CXB48_RS16990 PF10369 Small subunit of acetolactate synthase CXB48_RS16995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXB48_RS16995 PF00205 Thiamine pyrophosphate enzyme, central domain CXB48_RS16995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXB48_RS17005 PF00849 RNA pseudouridylate synthase CXB48_RS17005 PF04287 tRNA pseudouridine synthase C CXB48_RS17015 PF00905 Penicillin binding protein transpeptidase domain CXB48_RS17015 PF14814 Bifunctional transglycosylase second domain CXB48_RS17015 PF00912 Transglycosylase CXB48_RS17025 PF01609 Transposase DDE domain CXB48_RS17025 PF05598 Transposase domain (DUF772) CXB48_RS17050 PF00005 ABC transporter CXB48_RS17055 PF01032 FecCD transport family CXB48_RS17065 PF02683 Cytochrome C biogenesis protein transmembrane region CXB48_RS17065 PF11412 Disulphide bond corrector protein DsbC CXB48_RS17070 PF01220 Dehydroquinase class II CXB48_RS17075 PF00364 Biotin-requiring enzyme CXB48_RS17080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CXB48_RS17080 PF00289 Biotin carboxylase, N-terminal domain CXB48_RS17080 PF02785 Biotin carboxylase C-terminal domain CXB48_RS17095 PF01207 Dihydrouridine synthase (Dus) CXB48_RS17100 PF02954 Bacterial regulatory protein, Fis family CXB48_RS17105 PF01808 AICARFT/IMPCHase bienzyme CXB48_RS17105 PF02142 MGS-like domain CXB48_RS17110 PF02844 Phosphoribosylglycinamide synthetase, N domain CXB48_RS17110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CXB48_RS17110 PF02843 Phosphoribosylglycinamide synthetase, C domain CXB48_RS17115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CXB48_RS17115 PF01627 Hpt domain CXB48_RS17115 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS17115 PF00072 Response regulator receiver domain CXB48_RS17115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS17115 PF00672 HAMP domain CXB48_RS17120 PF00067 Cytochrome P450 CXB48_RS17135 PF03547 Membrane transport protein CXB48_RS17140 PF04321 RmlD substrate binding domain CXB48_RS17145 PF17746 SfsA N-terminal OB domain CXB48_RS17145 PF03749 Sugar fermentation stimulation protein RE domain CXB48_RS17150 PF00155 Aminotransferase class I and II CXB48_RS17155 PF01258 Prokaryotic dksA/traR C4-type zinc finger CXB48_RS17160 PF00749 tRNA synthetases class I (E and Q), catalytic domain CXB48_RS17170 PF00989 PAS fold CXB48_RS17170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS17170 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS17170 PF08447 PAS fold CXB48_RS17175 PF00158 Sigma-54 interaction domain CXB48_RS17175 PF00072 Response regulator receiver domain CXB48_RS17175 PF02954 Bacterial regulatory protein, Fis family CXB48_RS17180 PF01743 Poly A polymerase head domain CXB48_RS17180 PF12627 Probable RNA and SrmB- binding site of polymerase A CXB48_RS17180 PF12626 Polymerase A arginine-rich C-terminus CXB48_RS17185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CXB48_RS17190 PF02548 Ketopantoate hydroxymethyltransferase CXB48_RS17195 PF02569 Pantoate-beta-alanine ligase CXB48_RS17200 PF02261 Aspartate decarboxylase CXB48_RS17205 PF00342 Phosphoglucose isomerase CXB48_RS17215 PF10672 S-adenosylmethionine-dependent methyltransferase CXB48_RS17215 PF17785 PUA-like domain CXB48_RS17235 PF04972 BON domain CXB48_RS17240 PF03725 3' exoribonuclease family, domain 2 CXB48_RS17240 PF00575 S1 RNA binding domain CXB48_RS17240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CXB48_RS17240 PF00013 KH domain CXB48_RS17240 PF01138 3' exoribonuclease family, domain 1 CXB48_RS17245 PF00312 Ribosomal protein S15 CXB48_RS17250 PF09157 Pseudouridine synthase II TruB, C-terminal CXB48_RS17250 PF16198 tRNA pseudouridylate synthase B C-terminal domain CXB48_RS17250 PF01509 TruB family pseudouridylate synthase (N terminal domain) CXB48_RS17255 PF02033 Ribosome-binding factor A CXB48_RS17260 PF08364 Bacterial translation initiation factor IF-2 associated region CXB48_RS17260 PF00009 Elongation factor Tu GTP binding domain CXB48_RS17260 PF04760 Translation initiation factor IF-2, N-terminal region CXB48_RS17260 PF11987 Translation-initiation factor 2 CXB48_RS17265 PF13184 NusA-like KH domain CXB48_RS17265 PF08529 NusA N-terminal domain CXB48_RS17270 PF02576 RimP N-terminal domain CXB48_RS17270 PF17384 RimP C-terminal SH3 domain CXB48_RS17285 PF03840 Preprotein translocase SecG subunit CXB48_RS17290 PF00121 Triosephosphate isomerase CXB48_RS17295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CXB48_RS17295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CXB48_RS17295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CXB48_RS17295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CXB48_RS17300 PF00809 Pterin binding enzyme CXB48_RS17305 PF17862 AAA+ lid domain CXB48_RS17305 PF06480 FtsH Extracellular CXB48_RS17305 PF01434 Peptidase family M41 CXB48_RS17305 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS17310 PF01985 CRS1 / YhbY (CRM) domain CXB48_RS17320 PF03449 Transcription elongation factor, N-terminal CXB48_RS17320 PF01272 Transcription elongation factor, GreA/GreB, C-term CXB48_RS17325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CXB48_RS17325 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CXB48_RS17325 PF02142 MGS-like domain CXB48_RS17330 PF00117 Glutamine amidotransferase class-I CXB48_RS17330 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CXB48_RS17335 PF05173 Dihydrodipicolinate reductase, C-terminus CXB48_RS17335 PF01113 Dihydrodipicolinate reductase, N-terminus CXB48_RS17340 PF01556 DnaJ C terminal domain CXB48_RS17340 PF00226 DnaJ domain CXB48_RS17340 PF00684 DnaJ central domain CXB48_RS17345 PF00012 Hsp70 protein CXB48_RS17350 PF01025 GrpE CXB48_RS17355 PF02463 RecF/RecN/SMC N terminal domain CXB48_RS17360 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CXB48_RS17365 PF01475 Ferric uptake regulator family CXB48_RS17370 PF04355 SmpA / OmlA family CXB48_RS17375 PF03658 RnfH family Ubiquitin CXB48_RS17380 PF03364 Polyketide cyclase / dehydrase and lipid transport CXB48_RS17385 PF01668 SmpB protein CXB48_RS17390 PF00392 Bacterial regulatory proteins, gntR family CXB48_RS17390 PF07729 FCD domain CXB48_RS17395 PF02652 L-lactate permease CXB48_RS17400 PF02754 Cysteine-rich domain CXB48_RS17405 PF11870 Domain of unknown function (DUF3390) CXB48_RS17405 PF13183 4Fe-4S dicluster domain CXB48_RS17405 PF02589 LUD domain CXB48_RS17410 PF02589 LUD domain CXB48_RS17465 PF01695 IstB-like ATP binding protein CXB48_RS17470 PF00665 Integrase core domain CXB48_RS17510 PF13438 Domain of unknown function (DUF4113) CXB48_RS17510 PF00817 impB/mucB/samB family CXB48_RS17510 PF11799 impB/mucB/samB family C-terminal domain CXB48_RS17515 PF00717 Peptidase S24-like CXB48_RS17520 PF02586 SOS response associated peptidase (SRAP) CXB48_RS17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS17525 PF03466 LysR substrate binding domain CXB48_RS17530 PF00248 Aldo/keto reductase family CXB48_RS17560 PF00873 AcrB/AcrD/AcrF family CXB48_RS17565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CXB48_RS17565 PF00529 HlyD membrane-fusion protein of T1SS CXB48_RS17580 PF00970 Oxidoreductase FAD-binding domain CXB48_RS17580 PF00175 Oxidoreductase NAD-binding domain CXB48_RS17580 PF00042 Globin CXB48_RS17625 PF05275 Copper resistance protein B precursor (CopB) CXB48_RS17635 PF00394 Multicopper oxidase CXB48_RS17635 PF07731 Multicopper oxidase CXB48_RS17635 PF07732 Multicopper oxidase CXB48_RS17640 PF11412 Disulphide bond corrector protein DsbC CXB48_RS17640 PF02683 Cytochrome C biogenesis protein transmembrane region CXB48_RS17650 PF00403 Heavy-metal-associated domain CXB48_RS17650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXB48_RS17650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS17665 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS17665 PF00072 Response regulator receiver domain CXB48_RS17670 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS17670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS17670 PF00672 HAMP domain CXB48_RS17675 PF03860 Domain of Unknown Function (DUF326) CXB48_RS17690 PF02080 TrkA-C domain CXB48_RS17690 PF03471 Transporter associated domain CXB48_RS17690 PF00999 Sodium/hydrogen exchanger family CXB48_RS17700 PF00224 Pyruvate kinase, barrel domain CXB48_RS17700 PF02887 Pyruvate kinase, alpha/beta domain CXB48_RS17740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS17740 PF00672 HAMP domain CXB48_RS17740 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS17745 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS17745 PF00072 Response regulator receiver domain CXB48_RS17750 PF03573 outer membrane porin, OprD family CXB48_RS17755 PF02321 Outer membrane efflux protein CXB48_RS17760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CXB48_RS17760 PF00529 HlyD membrane-fusion protein of T1SS CXB48_RS17765 PF00873 AcrB/AcrD/AcrF family CXB48_RS17775 PF01545 Cation efflux family CXB48_RS17775 PF16916 Dimerisation domain of Zinc Transporter CXB48_RS17785 PF00376 MerR family regulatory protein CXB48_RS17785 PF09278 MerR, DNA binding CXB48_RS17790 PF02411 MerT mercuric transport protein CXB48_RS17795 PF00403 Heavy-metal-associated domain CXB48_RS17805 PF13700 Domain of unknown function (DUF4158) CXB48_RS17805 PF01526 Tn3 transposase DDE domain CXB48_RS17835 PF13007 Transposase C of IS166 homeodomain CXB48_RS17835 PF13817 IS66 C-terminal element CXB48_RS17835 PF03050 Transposase IS66 family CXB48_RS17835 PF13005 zinc-finger binding domain of transposase IS66 CXB48_RS17850 PF07929 Plasmid pRiA4b ORF-3-like protein CXB48_RS17855 PF03050 Transposase IS66 family CXB48_RS17855 PF13817 IS66 C-terminal element CXB48_RS17855 PF13007 Transposase C of IS166 homeodomain CXB48_RS17855 PF13005 zinc-finger binding domain of transposase IS66 CXB48_RS17860 PF05717 IS66 Orf2 like protein CXB48_RS17885 PF17755 UvrA DNA-binding domain CXB48_RS17905 PF13817 IS66 C-terminal element CXB48_RS17905 PF03050 Transposase IS66 family CXB48_RS17905 PF13007 Transposase C of IS166 homeodomain CXB48_RS17905 PF13005 zinc-finger binding domain of transposase IS66 CXB48_RS17930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CXB48_RS17930 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS17945 PF01810 LysE type translocator CXB48_RS17950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS17950 PF00072 Response regulator receiver domain CXB48_RS17950 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS17950 PF13188 PAS domain CXB48_RS17950 PF08448 PAS fold CXB48_RS17955 PF17912 MalK OB fold domain CXB48_RS17955 PF00005 ABC transporter CXB48_RS17960 PF00128 Alpha amylase, catalytic domain CXB48_RS17965 PF14602 Hexapeptide repeat of succinyl-transferase CXB48_RS17965 PF12464 Maltose acetyltransferase CXB48_RS17970 PF13417 Glutathione S-transferase, N-terminal domain CXB48_RS17975 PF00196 Bacterial regulatory proteins, luxR family CXB48_RS17975 PF17874 MalT-like TPR region CXB48_RS17980 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS17985 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS17985 PF14785 Maltose transport system permease protein MalF P2 domain CXB48_RS17990 PF01547 Bacterial extracellular solute-binding protein CXB48_RS17995 PF00128 Alpha amylase, catalytic domain CXB48_RS18005 PF00686 Starch binding domain CXB48_RS18005 PF09081 Domain of unknown function (DUF1921) CXB48_RS18005 PF00128 Alpha amylase, catalytic domain CXB48_RS18015 PF02264 LamB porin CXB48_RS18020 PF07148 Maltose operon periplasmic protein precursor (MalM) CXB48_RS18025 PF00893 Small Multidrug Resistance protein CXB48_RS18030 PF00248 Aldo/keto reductase family CXB48_RS18035 PF00171 Aldehyde dehydrogenase family CXB48_RS18040 PF01081 KDPG and KHG aldolase CXB48_RS18045 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CXB48_RS18050 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CXB48_RS18050 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CXB48_RS18055 PF01418 Helix-turn-helix domain, rpiR family CXB48_RS18055 PF01380 SIS domain CXB48_RS18060 PF02685 Glucokinase CXB48_RS18065 PF00920 Dehydratase family CXB48_RS18075 PF07690 Major Facilitator Superfamily CXB48_RS18080 PF10634 Fe2+ transport protein CXB48_RS18100 PF04055 Radical SAM superfamily CXB48_RS18120 PF08859 DGC domain CXB48_RS18125 PF02036 SCP-2 sterol transfer family CXB48_RS18130 PF01136 Peptidase family U32 CXB48_RS18135 PF01136 Peptidase family U32 CXB48_RS18145 PF00158 Sigma-54 interaction domain CXB48_RS18145 PF02954 Bacterial regulatory protein, Fis family CXB48_RS18150 PF04405 Domain of Unknown function (DUF542) CXB48_RS18150 PF01814 Hemerythrin HHE cation binding domain CXB48_RS18170 PF00092 von Willebrand factor type A domain CXB48_RS18175 PF00115 Cytochrome C and Quinol oxidase polypeptide I CXB48_RS18180 PF00034 Cytochrome c CXB48_RS18185 PF17805 AsnC-like ligand binding domain CXB48_RS18190 PF17805 AsnC-like ligand binding domain CXB48_RS18190 PF13404 AsnC-type helix-turn-helix domain CXB48_RS18195 PF17805 AsnC-like ligand binding domain CXB48_RS18200 PF17805 AsnC-like ligand binding domain CXB48_RS18210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXB48_RS18215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXB48_RS18220 PF09459 Ethylbenzene dehydrogenase CXB48_RS18225 PF03264 NapC/NirT cytochrome c family, N-terminal region CXB48_RS18230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXB48_RS18235 PF07728 AAA domain (dynein-related subfamily) CXB48_RS18235 PF08406 CbbQ/NirQ/NorQ C-terminal CXB48_RS18240 PF00510 Cytochrome c oxidase subunit III CXB48_RS18245 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CXB48_RS18250 PF13186 Iron-sulfur cluster-binding domain CXB48_RS18250 PF04055 Radical SAM superfamily CXB48_RS18255 PF10414 Sirohaem synthase dimerisation region CXB48_RS18255 PF14824 Sirohaem biosynthesis protein central CXB48_RS18255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CXB48_RS18265 PF07963 Prokaryotic N-terminal methylation motif CXB48_RS18265 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CXB48_RS18295 PF03466 LysR substrate binding domain CXB48_RS18295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS18305 PF00115 Cytochrome C and Quinol oxidase polypeptide I CXB48_RS18310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS18310 PF12729 Four helix bundle sensory module for signal transduction CXB48_RS18310 PF00672 HAMP domain CXB48_RS18325 PF02416 mttA/Hcf106 family CXB48_RS18330 PF05573 NosL CXB48_RS18335 PF12679 ABC-2 family transporter protein CXB48_RS18340 PF00005 ABC transporter CXB48_RS18345 PF05048 Periplasmic copper-binding protein (NosD) CXB48_RS18350 PF18793 Nitrous oxide reductase propeller repeat 2 CXB48_RS18350 PF18764 Nitrous oxide reductase propeller repeat CXB48_RS18350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CXB48_RS18355 PF04205 FMN-binding domain CXB48_RS18355 PF12801 4Fe-4S binding domain CXB48_RS18360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS18360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS18360 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS18375 PF04343 Protein of unknown function, DUF488 CXB48_RS18380 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS18385 PF03480 Bacterial extracellular solute-binding protein, family 7 CXB48_RS18390 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS18395 PF03313 Serine dehydratase alpha chain CXB48_RS18395 PF03315 Serine dehydratase beta chain CXB48_RS18405 PF18024 Helix-turn-helix domain CXB48_RS18405 PF00158 Sigma-54 interaction domain CXB48_RS18410 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CXB48_RS18415 PF01329 Pterin 4 alpha carbinolamine dehydratase CXB48_RS18420 PF00155 Aminotransferase class I and II CXB48_RS18430 PF02560 Cyanate lyase C-terminal domain CXB48_RS18440 PF06628 Catalase-related immune-responsive CXB48_RS18440 PF00199 Catalase CXB48_RS18445 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CXB48_RS18450 PF07969 Amidohydrolase family CXB48_RS18460 PF03061 Thioesterase superfamily CXB48_RS18465 PF08274 PhnA Zinc-Ribbon CXB48_RS18465 PF03831 PhnA domain CXB48_RS18470 PF00313 'Cold-shock' DNA-binding domain CXB48_RS18480 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS18490 PF02653 Branched-chain amino acid transport system / permease component CXB48_RS18500 PF00005 ABC transporter CXB48_RS18505 PF02608 ABC transporter substrate-binding protein PnrA-like CXB48_RS18525 PF07995 Glucose / Sorbosone dehydrogenase CXB48_RS18550 PF01810 LysE type translocator CXB48_RS18555 PF02311 AraC-like ligand binding domain CXB48_RS18555 PF12833 Helix-turn-helix domain CXB48_RS18560 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS18560 PF08362 YcdC-like protein, C-terminal region CXB48_RS18565 PF00296 Luciferase-like monooxygenase CXB48_RS18570 PF00857 Isochorismatase family CXB48_RS18575 PF01042 Endoribonuclease L-PSP CXB48_RS18580 PF00561 alpha/beta hydrolase fold CXB48_RS18585 PF00881 Nitroreductase family CXB48_RS18590 PF01613 Flavin reductase like domain CXB48_RS18595 PF01258 Prokaryotic dksA/traR C4-type zinc finger CXB48_RS18600 PF07683 Cobalamin synthesis protein cobW C-terminal domain CXB48_RS18600 PF02492 CobW/HypB/UreG, nucleotide-binding domain CXB48_RS18610 PF03860 Domain of Unknown Function (DUF326) CXB48_RS18615 PF01205 Uncharacterized protein family UPF0029 CXB48_RS18620 PF00962 Adenosine/AMP deaminase CXB48_RS18625 PF07690 Major Facilitator Superfamily CXB48_RS18630 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS18630 PF08361 MAATS-type transcriptional repressor, C-terminal region CXB48_RS18640 PF00403 Heavy-metal-associated domain CXB48_RS18645 PF00376 MerR family regulatory protein CXB48_RS18645 PF09278 MerR, DNA binding CXB48_RS18650 PF00672 HAMP domain CXB48_RS18650 PF16591 Helical bimodular sensor domain CXB48_RS18650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS18655 PF00210 Ferritin-like domain CXB48_RS18660 PF13533 Biotin-lipoyl like CXB48_RS18665 PF00873 AcrB/AcrD/AcrF family CXB48_RS18680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CXB48_RS18680 PF12833 Helix-turn-helix domain CXB48_RS18680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CXB48_RS18680 PF02805 Metal binding domain of Ada CXB48_RS18690 PF01026 TatD related DNase CXB48_RS18695 PF00672 HAMP domain CXB48_RS18695 PF17200 Single Cache domain 2 CXB48_RS18695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS18705 PF01510 N-acetylmuramoyl-L-alanine amidase CXB48_RS18710 PF04493 Endonuclease V CXB48_RS18720 PF03969 AFG1-like ATPase CXB48_RS18725 PF00579 tRNA synthetases class I (W and Y) CXB48_RS18730 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CXB48_RS18740 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CXB48_RS18740 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CXB48_RS18755 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXB48_RS18775 PF10431 C-terminal, D2-small domain, of ClpB protein CXB48_RS18775 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS18775 PF07724 AAA domain (Cdc48 subfamily) CXB48_RS18775 PF02861 Clp amino terminal domain, pathogenicity island component CXB48_RS18775 PF17871 AAA lid domain CXB48_RS18780 PF02578 Multi-copper polyphenol oxidoreductase laccase CXB48_RS18785 PF01479 S4 domain CXB48_RS18785 PF00849 RNA pseudouridylate synthase CXB48_RS18790 PF13525 Outer membrane lipoprotein CXB48_RS18800 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS18800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS18805 PF00158 Sigma-54 interaction domain CXB48_RS18805 PF00072 Response regulator receiver domain CXB48_RS18805 PF02954 Bacterial regulatory protein, Fis family CXB48_RS18815 PF00072 Response regulator receiver domain CXB48_RS18815 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS18820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS18825 PF08497 Radical SAM N-terminal CXB48_RS18825 PF04055 Radical SAM superfamily CXB48_RS18825 PF11842 Domain of unknown function (DUF3362) CXB48_RS18830 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS18830 PF00563 EAL domain CXB48_RS18830 PF13188 PAS domain CXB48_RS18830 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS18835 PF01168 Alanine racemase, N-terminal domain CXB48_RS18835 PF00842 Alanine racemase, C-terminal domain CXB48_RS18840 PF03796 DnaB-like helicase C terminal domain CXB48_RS18840 PF00772 DnaB-like helicase N terminal domain CXB48_RS18845 PF01281 Ribosomal protein L9, N-terminal domain CXB48_RS18845 PF03948 Ribosomal protein L9, C-terminal domain CXB48_RS18855 PF01084 Ribosomal protein S18 CXB48_RS18860 PF01250 Ribosomal protein S6 CXB48_RS18865 PF00072 Response regulator receiver domain CXB48_RS18865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS18865 PF13426 PAS domain CXB48_RS18870 PF00588 SpoU rRNA Methylase family CXB48_RS18870 PF08032 RNA 2'-O ribose methyltransferase substrate binding CXB48_RS18875 PF00575 S1 RNA binding domain CXB48_RS18875 PF00773 RNB domain CXB48_RS18875 PF17876 Cold shock domain CXB48_RS18875 PF08206 Ribonuclease B OB domain CXB48_RS18875 PF08461 Ribonuclease R winged-helix domain CXB48_RS18890 PF00709 Adenylosuccinate synthetase CXB48_RS18895 PF13393 Histidyl-tRNA synthetase CXB48_RS18900 PF01145 SPFH domain / Band 7 family CXB48_RS18905 PF12221 Bacterial membrane protein N terminal CXB48_RS18905 PF01145 SPFH domain / Band 7 family CXB48_RS18910 PF13167 GTP-binding GTPase N-terminal CXB48_RS18910 PF16360 GTP-binding GTPase Middle Region CXB48_RS18910 PF01926 50S ribosome-binding GTPase CXB48_RS18915 PF17209 Hfq protein CXB48_RS18925 PF08676 MutL C terminal dimerisation domain CXB48_RS18925 PF01119 DNA mismatch repair protein, C-terminal domain CXB48_RS18930 PF11741 AMIN domain CXB48_RS18930 PF01520 N-acetylmuramoyl-L-alanine amidase CXB48_RS18935 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CXB48_RS18940 PF01256 Carbohydrate kinase CXB48_RS18940 PF03853 YjeF-related protein N-terminus CXB48_RS18945 PF08331 Domain of unknown function (DUF1730) CXB48_RS18950 PF01434 Peptidase family M41 CXB48_RS18950 PF06480 FtsH Extracellular CXB48_RS18950 PF17862 AAA+ lid domain CXB48_RS18950 PF00004 ATPase family associated with various cellular activities (AAA) CXB48_RS18960 PF02441 Flavoprotein CXB48_RS18965 PF01225 Mur ligase family, catalytic domain CXB48_RS18965 PF02875 Mur ligase family, glutamate ligase domain CXB48_RS18965 PF08245 Mur ligase middle domain CXB48_RS18970 PF00171 Aldehyde dehydrogenase family CXB48_RS18975 PF13520 Amino acid permease CXB48_RS18980 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CXB48_RS18985 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CXB48_RS18990 PF16655 PhoD-like phosphatase, N-terminal domain CXB48_RS18990 PF09423 PhoD-like phosphatase CXB48_RS19000 PF06167 Glucose-regulated metallo-peptidase M90 CXB48_RS19005 PF00719 Inorganic pyrophosphatase CXB48_RS19010 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS19025 PF00563 EAL domain CXB48_RS19025 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS19025 PF13188 PAS domain CXB48_RS19025 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS19035 PF00282 Pyridoxal-dependent decarboxylase conserved domain CXB48_RS19040 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CXB48_RS19055 PF04183 IucA / IucC family CXB48_RS19055 PF06276 Ferric iron reductase FhuF-like transporter CXB48_RS19065 PF02609 Exonuclease VII small subunit CXB48_RS19070 PF00348 Polyprenyl synthetase CXB48_RS19075 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CXB48_RS19075 PF02779 Transketolase, pyrimidine binding domain CXB48_RS19075 PF02780 Transketolase, C-terminal domain CXB48_RS19095 PF00106 short chain dehydrogenase CXB48_RS19105 PF00271 Helicase conserved C-terminal domain CXB48_RS19105 PF04408 Helicase associated domain (HA2) CXB48_RS19105 PF00270 DEAD/DEAH box helicase CXB48_RS19105 PF08482 ATP-dependent helicase C-terminal CXB48_RS19120 PF16916 Dimerisation domain of Zinc Transporter CXB48_RS19120 PF01545 Cation efflux family CXB48_RS19125 PF01037 Lrp/AsnC ligand binding domain CXB48_RS19125 PF13404 AsnC-type helix-turn-helix domain CXB48_RS19140 PF00849 RNA pseudouridylate synthase CXB48_RS19150 PF02653 Branched-chain amino acid transport system / permease component CXB48_RS19155 PF02653 Branched-chain amino acid transport system / permease component CXB48_RS19160 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXB48_RS19160 PF00005 ABC transporter CXB48_RS19165 PF00005 ABC transporter CXB48_RS19170 PF00690 Cation transporter/ATPase, N-terminus CXB48_RS19170 PF00689 Cation transporting ATPase, C-terminus CXB48_RS19175 PF01774 UreD urease accessory protein CXB48_RS19180 PF00547 Urease, gamma subunit CXB48_RS19190 PF00699 Urease beta subunit CXB48_RS19195 PF01979 Amidohydrolase family CXB48_RS19195 PF00449 Urease alpha-subunit, N-terminal domain CXB48_RS19200 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CXB48_RS19205 PF08446 PAS fold CXB48_RS19205 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS19205 PF01590 GAF domain CXB48_RS19205 PF00360 Phytochrome region CXB48_RS19205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS19210 PF01258 Prokaryotic dksA/traR C4-type zinc finger CXB48_RS19220 PF07690 Major Facilitator Superfamily CXB48_RS19240 PF05194 UreE urease accessory protein, C-terminal domain CXB48_RS19240 PF02814 UreE urease accessory protein, N-terminal domain CXB48_RS19245 PF01730 UreF CXB48_RS19255 PF02492 CobW/HypB/UreG, nucleotide-binding domain CXB48_RS19260 PF04955 HupE / UreJ protein CXB48_RS19265 PF01011 PQQ enzyme repeat CXB48_RS19270 PF13360 PQQ-like domain CXB48_RS19275 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CXB48_RS19275 PF01048 Phosphorylase superfamily CXB48_RS19280 PF00392 Bacterial regulatory proteins, gntR family CXB48_RS19280 PF00155 Aminotransferase class I and II CXB48_RS19295 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS19295 PF18158 Adaptive response protein AidB N-terminal domain CXB48_RS19295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS19300 PF00672 HAMP domain CXB48_RS19300 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS19300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS19300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CXB48_RS19300 PF01627 Hpt domain CXB48_RS19300 PF00072 Response regulator receiver domain CXB48_RS19305 PF08543 Phosphomethylpyrimidine kinase CXB48_RS19305 PF02581 Thiamine monophosphate synthase CXB48_RS19310 PF02581 Thiamine monophosphate synthase CXB48_RS19315 PF00202 Aminotransferase class-III CXB48_RS19330 PF04055 Radical SAM superfamily CXB48_RS19330 PF01938 TRAM domain CXB48_RS19330 PF00919 Uncharacterized protein family UPF0004 CXB48_RS19335 PF02562 PhoH-like protein CXB48_RS19340 PF02130 Uncharacterized protein family UPF0054 CXB48_RS19345 PF03471 Transporter associated domain CXB48_RS19345 PF00571 CBS domain CXB48_RS19350 PF00795 Carbon-nitrogen hydrolase CXB48_RS19365 PF13603 Leucyl-tRNA synthetase, Domain 2 CXB48_RS19365 PF08264 Anticodon-binding domain of tRNA CXB48_RS19365 PF09334 tRNA synthetases class I (M) CXB48_RS19365 PF00133 tRNA synthetases class I (I, L, M and V) CXB48_RS19380 PF03889 Alternative ribosome-rescue factor A CXB48_RS19385 PF13406 Transglycosylase SLT domain CXB48_RS19395 PF04055 Radical SAM superfamily CXB48_RS19395 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CXB48_RS19400 PF03099 Biotin/lipoate A/B protein ligase family CXB48_RS19405 PF04359 Protein of unknown function (DUF493) CXB48_RS19410 PF07943 Penicillin-binding protein 5, C-terminal domain CXB48_RS19410 PF00768 D-alanyl-D-alanine carboxypeptidase CXB48_RS19415 PF03330 Lytic transglycolase CXB48_RS19415 PF05036 Sporulation related domain CXB48_RS19420 PF13406 Transglycosylase SLT domain CXB48_RS19425 PF01098 Cell cycle protein CXB48_RS19430 PF00905 Penicillin binding protein transpeptidase domain CXB48_RS19430 PF03717 Penicillin-binding Protein dimerisation domain CXB48_RS19435 PF02590 Predicted SPOUT methyltransferase CXB48_RS19445 PF01467 Cytidylyltransferase-like CXB48_RS19450 PF00171 Aldehyde dehydrogenase family CXB48_RS19455 PF09335 SNARE associated Golgi protein CXB48_RS19465 PF04172 LrgB-like family CXB48_RS19470 PF03788 LrgA family CXB48_RS19475 PF01575 MaoC like domain CXB48_RS19485 PF13460 NAD(P)H-binding CXB48_RS19490 PF00929 Exonuclease CXB48_RS19500 PF03193 RsgA GTPase CXB48_RS19505 PF00691 OmpA family CXB48_RS19505 PF13677 Membrane MotB of proton-channel complex MotA/MotB CXB48_RS19510 PF01618 MotA/TolQ/ExbB proton channel family CXB48_RS19520 PF00581 Rhodanese-like domain CXB48_RS19525 PF02666 Phosphatidylserine decarboxylase CXB48_RS19535 PF05231 MASE1 CXB48_RS19535 PF00563 EAL domain CXB48_RS19540 PF00107 Zinc-binding dehydrogenase CXB48_RS19540 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS19560 PF00521 DNA gyrase/topoisomerase IV, subunit A CXB48_RS19560 PF03989 DNA gyrase C-terminal domain, beta-propeller CXB48_RS19575 PF00204 DNA gyrase B CXB48_RS19575 PF00986 DNA gyrase B subunit, carboxyl terminus CXB48_RS19575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS19575 PF01751 Toprim domain CXB48_RS19580 PF05728 Uncharacterised protein family (UPF0227) CXB48_RS19585 PF00149 Calcineurin-like phosphoesterase CXB48_RS19595 PF00293 NUDIX domain CXB48_RS19605 PF01964 Radical SAM ThiC family CXB48_RS19605 PF13667 ThiC-associated domain CXB48_RS19610 PF02321 Outer membrane efflux protein CXB48_RS19615 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CXB48_RS19620 PF00893 Small Multidrug Resistance protein CXB48_RS19625 PF01266 FAD dependent oxidoreductase CXB48_RS19630 PF00248 Aldo/keto reductase family CXB48_RS19650 PF00294 pfkB family carbohydrate kinase CXB48_RS19650 PF01467 Cytidylyltransferase-like CXB48_RS19665 PF00005 ABC transporter CXB48_RS19665 PF00664 ABC transporter transmembrane region CXB48_RS19695 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS19700 PF00534 Glycosyl transferases group 1 CXB48_RS19700 PF13439 Glycosyltransferase Family 4 CXB48_RS19705 PF02543 Carbamoyltransferase N-terminus CXB48_RS19705 PF16861 Carbamoyltransferase C-terminus CXB48_RS19730 PF00534 Glycosyl transferases group 1 CXB48_RS19730 PF13439 Glycosyltransferase Family 4 CXB48_RS19735 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CXB48_RS19740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CXB48_RS19745 PF01063 Amino-transferase class IV CXB48_RS19750 PF08335 GlnD PII-uridylyltransferase CXB48_RS19750 PF03710 Glutamate-ammonia ligase adenylyltransferase CXB48_RS19755 PF17831 Pyruvate dehydrogenase E1 component middle domain CXB48_RS19755 PF00456 Transketolase, thiamine diphosphate binding domain CXB48_RS19760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CXB48_RS19760 PF00364 Biotin-requiring enzyme CXB48_RS19760 PF02817 e3 binding domain CXB48_RS19770 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS19770 PF00563 EAL domain CXB48_RS19770 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS19775 PF01625 Peptide methionine sulfoxide reductase CXB48_RS19780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS19780 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS19780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS19780 PF12806 Acetyl-CoA dehydrogenase C-terminal like CXB48_RS19785 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS19790 PF13542 Helix-turn-helix domain of transposase family ISL3 CXB48_RS19790 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CXB48_RS19790 PF01610 Transposase CXB48_RS19800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS19800 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS19800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS19800 PF12806 Acetyl-CoA dehydrogenase C-terminal like CXB48_RS19815 PF08241 Methyltransferase domain CXB48_RS19820 PF12697 Alpha/beta hydrolase family CXB48_RS19820 PF08241 Methyltransferase domain CXB48_RS19825 PF00155 Aminotransferase class I and II CXB48_RS19830 PF06968 Biotin and Thiamin Synthesis associated domain CXB48_RS19830 PF04055 Radical SAM superfamily CXB48_RS19835 PF00156 Phosphoribosyl transferase domain CXB48_RS19840 PF01636 Phosphotransferase enzyme family CXB48_RS19845 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CXB48_RS19850 PF03060 Nitronate monooxygenase CXB48_RS19855 PF04116 Fatty acid hydroxylase superfamily CXB48_RS19865 PF01593 Flavin containing amine oxidoreductase CXB48_RS19875 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CXB48_RS19880 PF01070 FMN-dependent dehydrogenase CXB48_RS19885 PF00348 Polyprenyl synthetase CXB48_RS19890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXB48_RS19890 PF02770 Acyl-CoA dehydrogenase, middle domain CXB48_RS19890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXB48_RS19890 PF12806 Acetyl-CoA dehydrogenase C-terminal like CXB48_RS19895 PF03471 Transporter associated domain CXB48_RS19895 PF00999 Sodium/hydrogen exchanger family CXB48_RS19895 PF02080 TrkA-C domain CXB48_RS19900 PF12795 Mechanosensitive ion channel porin domain CXB48_RS19900 PF12794 Mechanosensitive ion channel inner membrane domain 1 CXB48_RS19900 PF00924 Mechanosensitive ion channel CXB48_RS19905 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CXB48_RS19910 PF16736 Single Cache-like CXB48_RS19910 PF00989 PAS fold CXB48_RS19910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS19910 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS19915 PF01339 CheB methylesterase CXB48_RS19920 PF01739 CheR methyltransferase, SAM binding domain CXB48_RS19920 PF03705 CheR methyltransferase, all-alpha domain CXB48_RS19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS19925 PF01627 Hpt domain CXB48_RS19925 PF00072 Response regulator receiver domain CXB48_RS19925 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS19930 PF01679 Proteolipid membrane potential modulator CXB48_RS19935 PF00106 short chain dehydrogenase CXB48_RS19945 PF00753 Metallo-beta-lactamase superfamily CXB48_RS19955 PF16200 C-terminal region of band_7 CXB48_RS19955 PF01145 SPFH domain / Band 7 family CXB48_RS19980 PF00892 EamA-like transporter family CXB48_RS19990 PF01274 Malate synthase CXB48_RS20000 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CXB48_RS20020 PF00474 Sodium:solute symporter family CXB48_RS20035 PF00271 Helicase conserved C-terminal domain CXB48_RS20035 PF00270 DEAD/DEAH box helicase CXB48_RS20035 PF03880 DbpA RNA binding domain CXB48_RS20040 PF12805 FUSC-like inner membrane protein yccS CXB48_RS20065 PF00563 EAL domain CXB48_RS20065 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS20065 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS20085 PF00072 Response regulator receiver domain CXB48_RS20085 PF03861 ANTAR domain CXB48_RS20090 PF01116 Fructose-bisphosphate aldolase class-II CXB48_RS20105 PF00162 Phosphoglycerate kinase CXB48_RS20110 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CXB48_RS20110 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CXB48_RS20115 PF02780 Transketolase, C-terminal domain CXB48_RS20115 PF02779 Transketolase, pyrimidine binding domain CXB48_RS20115 PF00456 Transketolase, thiamine diphosphate binding domain CXB48_RS20120 PF03466 LysR substrate binding domain CXB48_RS20120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS20125 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CXB48_RS20135 PF13649 Methyltransferase domain CXB48_RS20140 PF00438 S-adenosylmethionine synthetase, N-terminal domain CXB48_RS20140 PF02773 S-adenosylmethionine synthetase, C-terminal domain CXB48_RS20140 PF02772 S-adenosylmethionine synthetase, central domain CXB48_RS20150 PF01061 ABC-2 type transporter CXB48_RS20155 PF00005 ABC transporter CXB48_RS20160 PF00175 Oxidoreductase NAD-binding domain CXB48_RS20160 PF00111 2Fe-2S iron-sulfur cluster binding domain CXB48_RS20160 PF00970 Oxidoreductase FAD-binding domain CXB48_RS20165 PF01653 NAD-dependent DNA ligase adenylation domain CXB48_RS20165 PF03120 NAD-dependent DNA ligase OB-fold domain CXB48_RS20185 PF05221 S-adenosyl-L-homocysteine hydrolase CXB48_RS20185 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CXB48_RS20190 PF02219 Methylenetetrahydrofolate reductase CXB48_RS20195 PF00270 DEAD/DEAH box helicase CXB48_RS20195 PF00271 Helicase conserved C-terminal domain CXB48_RS20200 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CXB48_RS20200 PF02321 Outer membrane efflux protein CXB48_RS20205 PF00873 AcrB/AcrD/AcrF family CXB48_RS20210 PF00529 HlyD membrane-fusion protein of T1SS CXB48_RS20210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CXB48_RS20215 PF04264 YceI-like domain CXB48_RS20220 PF01292 Prokaryotic cytochrome b561 CXB48_RS20225 PF00202 Aminotransferase class-III CXB48_RS20230 PF04452 RNA methyltransferase CXB48_RS20240 PF00072 Response regulator receiver domain CXB48_RS20240 PF01339 CheB methylesterase CXB48_RS20245 PF01627 Hpt domain CXB48_RS20245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS20245 PF02895 Signal transducing histidine kinase, homodimeric domain CXB48_RS20245 PF00072 Response regulator receiver domain CXB48_RS20245 PF01584 CheW-like domain CXB48_RS20250 PF01739 CheR methyltransferase, SAM binding domain CXB48_RS20250 PF03705 CheR methyltransferase, all-alpha domain CXB48_RS20255 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CXB48_RS20255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS20260 PF01584 CheW-like domain CXB48_RS20265 PF00072 Response regulator receiver domain CXB48_RS20270 PF00072 Response regulator receiver domain CXB48_RS20275 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CXB48_RS20275 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CXB48_RS20285 PF02622 Uncharacterized ACR, COG1678 CXB48_RS20290 PF03652 Holliday junction resolvase CXB48_RS20295 PF00156 Phosphoribosyl transferase domain CXB48_RS20300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CXB48_RS20300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CXB48_RS20305 PF01979 Amidohydrolase family CXB48_RS20325 PF00437 Type II/IV secretion system protein CXB48_RS20330 PF00437 Type II/IV secretion system protein CXB48_RS20335 PF01168 Alanine racemase, N-terminal domain CXB48_RS20340 PF03807 NADP oxidoreductase coenzyme F420-dependent CXB48_RS20340 PF14748 Pyrroline-5-carboxylate reductase dimerisation CXB48_RS20345 PF02325 YGGT family CXB48_RS20355 PF00561 alpha/beta hydrolase fold CXB48_RS20360 PF00561 alpha/beta hydrolase fold CXB48_RS20360 PF07021 Methionine biosynthesis protein MetW CXB48_RS20370 PF01725 Ham1 family CXB48_RS20375 PF04055 Radical SAM superfamily CXB48_RS20375 PF06969 HemN C-terminal domain CXB48_RS20390 PF13520 Amino acid permease CXB48_RS20400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CXB48_RS20400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CXB48_RS20405 PF00696 Amino acid kinase family CXB48_RS20410 PF07044 Protein of unknown function (DUF1329) CXB48_RS20415 PF02390 Putative methyltransferase CXB48_RS20420 PF05690 Thiazole biosynthesis protein ThiG CXB48_RS20425 PF02597 ThiS family CXB48_RS20425 PF05690 Thiazole biosynthesis protein ThiG CXB48_RS20430 PF04241 Protein of unknown function (DUF423) CXB48_RS20435 PF00912 Transglycosylase CXB48_RS20440 PF00563 EAL domain CXB48_RS20440 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS20440 PF03707 Bacterial signalling protein N terminal repeat CXB48_RS20445 PF17149 Periplasmic sensor domain found in signal transduction proteins CXB48_RS20445 PF00072 Response regulator receiver domain CXB48_RS20445 PF01627 Hpt domain CXB48_RS20445 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS20445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS20445 PF00672 HAMP domain CXB48_RS20450 PF04545 Sigma-70, region 4 CXB48_RS20450 PF04542 Sigma-70 region 2 CXB48_RS20450 PF00140 Sigma-70 factor, region 1.2 CXB48_RS20455 PF18075 FtsX extracellular domain CXB48_RS20460 PF00005 ABC transporter CXB48_RS20465 PF00448 SRP54-type protein, GTPase domain CXB48_RS20465 PF02881 SRP54-type protein, helical bundle domain CXB48_RS20470 PF00675 Insulinase (Peptidase family M16) CXB48_RS20470 PF05193 Peptidase M16 inactive domain CXB48_RS20475 PF05193 Peptidase M16 inactive domain CXB48_RS20495 PF00440 Bacterial regulatory proteins, tetR family CXB48_RS20500 PF00171 Aldehyde dehydrogenase family CXB48_RS20510 PF05199 GMC oxidoreductase CXB48_RS20510 PF00732 GMC oxidoreductase CXB48_RS20515 PF01467 Cytidylyltransferase-like CXB48_RS20520 PF00037 4Fe-4S binding domain CXB48_RS20540 PF06827 Zinc finger found in FPG and IleRS CXB48_RS20540 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CXB48_RS20540 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CXB48_RS20550 PF01965 DJ-1/PfpI family CXB48_RS20555 PF17785 PUA-like domain CXB48_RS20555 PF10672 S-adenosylmethionine-dependent methyltransferase CXB48_RS20565 PF00920 Dehydratase family CXB48_RS20570 PF13687 Domain of unknown function (DUF4153) CXB48_RS20590 PF00186 Dihydrofolate reductase CXB48_RS20595 PF03009 Glycerophosphoryl diester phosphodiesterase family CXB48_RS20605 PF10396 GTP-binding protein TrmE N-terminus CXB48_RS20605 PF01926 50S ribosome-binding GTPase CXB48_RS20605 PF12631 MnmE helical domain CXB48_RS20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS20615 PF03466 LysR substrate binding domain CXB48_RS20620 PF01895 PhoU domain CXB48_RS20625 PF00005 ABC transporter CXB48_RS20630 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS20635 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS20640 PF12849 PBP superfamily domain CXB48_RS20645 PF03061 Thioesterase superfamily CXB48_RS20650 PF01590 GAF domain CXB48_RS20650 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS20650 PF00563 EAL domain CXB48_RS20650 PF00360 Phytochrome region CXB48_RS20665 PF13538 UvrD-like helicase C-terminal domain CXB48_RS20670 PF13361 UvrD-like helicase C-terminal domain CXB48_RS20670 PF00580 UvrD/REP helicase N-terminal domain CXB48_RS20670 PF12705 PD-(D/E)XK nuclease superfamily CXB48_RS20675 PF17946 RecC C-terminal domain CXB48_RS20685 PF02690 Na+/Pi-cotransporter CXB48_RS20690 PF05145 Transition state regulatory protein AbrB CXB48_RS20695 PF01970 Tripartite tricarboxylate transporter TctA family CXB48_RS20710 PF03573 outer membrane porin, OprD family CXB48_RS20715 PF00486 Transcriptional regulatory protein, C terminal CXB48_RS20715 PF00072 Response regulator receiver domain CXB48_RS20720 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS20720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS20725 PF00360 Phytochrome region CXB48_RS20725 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS20725 PF00563 EAL domain CXB48_RS20725 PF01590 GAF domain CXB48_RS20730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS20730 PF08447 PAS fold CXB48_RS20740 PF05598 Transposase domain (DUF772) CXB48_RS20740 PF01609 Transposase DDE domain CXB48_RS20745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXB48_RS20745 PF00672 HAMP domain CXB48_RS20750 PF16868 NMT1-like family CXB48_RS20760 PF07670 Nucleoside recognition CXB48_RS20780 PF00158 Sigma-54 interaction domain CXB48_RS20780 PF00072 Response regulator receiver domain CXB48_RS20780 PF02954 Bacterial regulatory protein, Fis family CXB48_RS20785 PF08448 PAS fold CXB48_RS20785 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB CXB48_RS20785 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS20785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS20785 PF00672 HAMP domain CXB48_RS20795 PF01510 N-acetylmuramoyl-L-alanine amidase CXB48_RS20800 PF00990 Diguanylate cyclase, GGDEF domain CXB48_RS20810 PF01323 DSBA-like thioredoxin domain CXB48_RS20815 PF00034 Cytochrome c CXB48_RS20820 PF01926 50S ribosome-binding GTPase CXB48_RS20825 PF02347 Glycine cleavage system P-protein CXB48_RS20830 PF01597 Glycine cleavage H-protein CXB48_RS20835 PF08669 Glycine cleavage T-protein C-terminal barrel domain CXB48_RS20835 PF01571 Aminomethyltransferase folate-binding domain CXB48_RS20840 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS20850 PF01494 FAD binding domain CXB48_RS20860 PF01494 FAD binding domain CXB48_RS20865 PF05195 Aminopeptidase P, N-terminal domain CXB48_RS20865 PF00557 Metallopeptidase family M24 CXB48_RS20870 PF03695 Uncharacterised protein family (UPF0149) CXB48_RS20880 PF05164 Cell division protein ZapA CXB48_RS20890 PF01812 5-formyltetrahydrofolate cyclo-ligase family CXB48_RS20905 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS20905 PF00107 Zinc-binding dehydrogenase CXB48_RS20910 PF02556 Preprotein translocase subunit SecB CXB48_RS20915 PF00462 Glutaredoxin CXB48_RS20920 PF00581 Rhodanese-like domain CXB48_RS20925 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CXB48_RS20925 PF01676 Metalloenzyme superfamily CXB48_RS20930 PF01551 Peptidase family M23 CXB48_RS20935 PF13180 PDZ domain CXB48_RS20935 PF03572 Peptidase family S41 CXB48_RS20940 PF04748 Divergent polysaccharide deacetylase CXB48_RS20955 PF00977 Histidine biosynthesis protein CXB48_RS20960 PF00977 Histidine biosynthesis protein CXB48_RS20970 PF00117 Glutamine amidotransferase class-I CXB48_RS20975 PF00475 Imidazoleglycerol-phosphate dehydratase CXB48_RS20980 PF03861 ANTAR domain CXB48_RS20980 PF08376 Nitrate and nitrite sensing CXB48_RS20990 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS20995 PF00005 ABC transporter CXB48_RS21010 PF14815 NUDIX domain CXB48_RS21010 PF00730 HhH-GPD superfamily base excision DNA repair protein CXB48_RS21010 PF00633 Helix-hairpin-helix motif CXB48_RS21010 PF10576 Iron-sulfur binding domain of endonuclease III CXB48_RS21015 PF04362 Bacterial Fe(2+) trafficking CXB48_RS21025 PF00565 Staphylococcal nuclease homologue CXB48_RS21035 PF02028 BCCT, betaine/carnitine/choline family transporter CXB48_RS21040 PF00005 ABC transporter CXB48_RS21045 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXB48_RS21050 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS21055 PF00528 Binding-protein-dependent transport system inner membrane component CXB48_RS21060 PF01263 Aldose 1-epimerase CXB48_RS21070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS21070 PF03466 LysR substrate binding domain CXB48_RS21075 PF01266 FAD dependent oxidoreductase CXB48_RS21095 PF00698 Acyl transferase domain CXB48_RS21100 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CXB48_RS21110 PF01039 Carboxyl transferase domain CXB48_RS21115 PF06857 Malonate decarboxylase delta subunit (MdcD) CXB48_RS21120 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CXB48_RS21125 PF16957 Malonate decarboxylase, alpha subunit, transporter CXB48_RS21130 PF00106 short chain dehydrogenase CXB48_RS21150 PF16868 NMT1-like family CXB48_RS21190 PF00296 Luciferase-like monooxygenase CXB48_RS21200 PF07311 Dodecin CXB48_RS21205 PF02798 Glutathione S-transferase, N-terminal domain CXB48_RS21225 PF00565 Staphylococcal nuclease homologue CXB48_RS21225 PF00149 Calcineurin-like phosphoesterase CXB48_RS21225 PF02872 5'-nucleotidase, C-terminal domain CXB48_RS21225 PF00746 LPXTG cell wall anchor motif CXB48_RS21240 PF03575 Peptidase family S51 CXB48_RS21245 PF00005 ABC transporter CXB48_RS21245 PF00664 ABC transporter transmembrane region CXB48_RS21280 PF04239 Protein of unknown function (DUF421) CXB48_RS21285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXB48_RS21285 PF03466 LysR substrate binding domain CXB48_RS21300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CXB48_RS21300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CXB48_RS21300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CXB48_RS21300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CXB48_RS21305 PF08240 Alcohol dehydrogenase GroES-like domain CXB48_RS21315 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS21320 PF01432 Peptidase family M3 CXB48_RS21330 PF01757 Acyltransferase family CXB48_RS21335 PF04055 Radical SAM superfamily CXB48_RS21340 PF00484 Carbonic anhydrase CXB48_RS21345 PF01740 STAS domain CXB48_RS21345 PF00916 Sulfate permease family CXB48_RS21355 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CXB48_RS21355 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CXB48_RS21360 PF00115 Cytochrome C and Quinol oxidase polypeptide I CXB48_RS21365 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CXB48_RS21370 PF00510 Cytochrome c oxidase subunit III CXB48_RS21390 PF02628 Cytochrome oxidase assembly protein CXB48_RS21395 PF01040 UbiA prenyltransferase family CXB48_RS21400 PF02630 SCO1/SenC CXB48_RS21410 PF00593 TonB dependent receptor CXB48_RS21410 PF07715 TonB-dependent Receptor Plug Domain CXB48_RS21420 PF04542 Sigma-70 region 2 CXB48_RS21420 PF08281 Sigma-70, region 4 CXB48_RS21435 PF07683 Cobalamin synthesis protein cobW C-terminal domain CXB48_RS21435 PF02492 CobW/HypB/UreG, nucleotide-binding domain CXB48_RS21450 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS21450 PF00360 Phytochrome region CXB48_RS21450 PF08446 PAS fold CXB48_RS21450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS21450 PF01590 GAF domain CXB48_RS21455 PF00072 Response regulator receiver domain CXB48_RS21460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXB48_RS21460 PF00512 His Kinase A (phospho-acceptor) domain CXB48_RS21460 PF08448 PAS fold CXB48_RS21460 PF00072 Response regulator receiver domain CXB48_RS21460 PF13188 PAS domain CXB48_RS21465 PF01126 Heme oxygenase CXB48_RS21470 PF01380 SIS domain CXB48_RS21475 PF08220 DeoR-like helix-turn-helix domain CXB48_RS21475 PF00455 DeoR C terminal sensor domain CXB48_RS21480 PF01810 LysE type translocator CXB48_RS21485 PF14602 Hexapeptide repeat of succinyl-transferase CXB48_RS21485 PF00132 Bacterial transferase hexapeptide (six repeats) CXB48_RS21485 PF12804 MobA-like NTP transferase domain CXB48_RS21490 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CXB48_RS21490 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CXB48_RS21495 PF02874 ATP synthase alpha/beta family, beta-barrel domain CXB48_RS21495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CXB48_RS21500 PF00231 ATP synthase CXB48_RS21505 PF02874 ATP synthase alpha/beta family, beta-barrel domain CXB48_RS21505 PF00306 ATP synthase alpha/beta chain, C terminal domain CXB48_RS21505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CXB48_RS21510 PF00213 ATP synthase delta (OSCP) subunit CXB48_RS21515 PF00430 ATP synthase B/B' CF(0) CXB48_RS21520 PF00137 ATP synthase subunit C CXB48_RS21525 PF00119 ATP synthase A chain CXB48_RS21530 PF03899 ATP synthase I chain CXB48_RS21535 PF17762 HTH domain found in ParB protein CXB48_RS21535 PF02195 ParB-like nuclease domain CXB48_RS21540 PF13614 AAA domain CXB48_RS21545 PF02527 rRNA small subunit methyltransferase G CXB48_RS21550 PF13932 GidA associated domain CXB48_RS21550 PF01134 Glucose inhibited division protein A CXB48_RS21555 PF03334 Na+/H+ antiporter subunit CXB48_RS21570 PF00361 Proton-conducting membrane transporter CXB48_RS21575 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CXB48_RS21580 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CXB48_RS21585 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CXB48_RS21585 PF13244 Domain of unknown function (DUF4040) CXB48_RS21585 PF00361 Proton-conducting membrane transporter CXB48_RS21590 PF12631 MnmE helical domain CXB48_RS21590 PF10396 GTP-binding protein TrmE N-terminus CXB48_RS21590 PF01926 50S ribosome-binding GTPase CXB48_RS21595 PF02096 60Kd inner membrane protein CXB48_RS21595 PF14849 YidC periplasmic domain CXB48_RS21600 PF01809 Putative membrane protein insertion efficiency factor CXB48_RS21605 PF00825 Ribonuclease P CXB48_RS21610 PF00468 Ribosomal protein L34