locus-tag class description JJQ97_RS00005 PF00580 UvrD/REP helicase N-terminal domain JJQ97_RS00005 PF13361 UvrD-like helicase C-terminal domain JJQ97_RS00010 PF00156 Phosphoribosyl transferase domain JJQ97_RS00015 PF00158 Sigma-54 interaction domain JJQ97_RS00015 PF00072 Response regulator receiver domain JJQ97_RS00015 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS00020 PF00753 Metallo-beta-lactamase superfamily JJQ97_RS00030 PF01925 Sulfite exporter TauE/SafE JJQ97_RS00035 PF00005 ABC transporter JJQ97_RS00035 PF12857 TOBE-like domain JJQ97_RS00040 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS00045 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS00060 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS00060 PF00563 EAL domain JJQ97_RS00060 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS00070 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS00070 PF08448 PAS fold JJQ97_RS00075 PF00072 Response regulator receiver domain JJQ97_RS00075 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS00080 PF00202 Aminotransferase class-III JJQ97_RS00085 PF00171 Aldehyde dehydrogenase family JJQ97_RS00090 PF01810 LysE type translocator JJQ97_RS00095 PF01494 FAD binding domain JJQ97_RS00115 PF02481 DNA recombination-mediator protein A JJQ97_RS00115 PF18255 DNA processing protein A sterile alpha motif domain JJQ97_RS00135 PF07690 Major Facilitator Superfamily JJQ97_RS00150 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS00150 PF17754 MftR C-terminal domain JJQ97_RS00160 PF06441 Epoxide hydrolase N terminus JJQ97_RS00175 PF02153 Prephenate dehydrogenase JJQ97_RS00175 PF01817 Chorismate mutase type II JJQ97_RS00185 PF04828 Glutathione-dependent formaldehyde-activating enzyme JJQ97_RS00205 PF13419 Haloacid dehalogenase-like hydrolase JJQ97_RS00215 PF01037 Lrp/AsnC ligand binding domain JJQ97_RS00220 PF00266 Aminotransferase class-V JJQ97_RS00225 PF03544 Gram-negative bacterial TonB protein C-terminal JJQ97_RS00230 PF01618 MotA/TolQ/ExbB proton channel family JJQ97_RS00235 PF02472 Biopolymer transport protein ExbD/TolR JJQ97_RS00240 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS00240 PF00593 TonB dependent receptor JJQ97_RS00245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS00250 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS00255 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS00255 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ97_RS00260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS00260 PF00005 ABC transporter JJQ97_RS00265 PF00672 HAMP domain JJQ97_RS00265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS00265 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS00270 PF01037 Lrp/AsnC ligand binding domain JJQ97_RS00280 PF00202 Aminotransferase class-III JJQ97_RS00285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ97_RS00290 PF00171 Aldehyde dehydrogenase family JJQ97_RS00295 PF01546 Peptidase family M20/M25/M40 JJQ97_RS00295 PF07687 Peptidase dimerisation domain JJQ97_RS00300 PF01266 FAD dependent oxidoreductase JJQ97_RS00315 PF00005 ABC transporter JJQ97_RS00315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS00320 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS00320 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ97_RS00325 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS00330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS00335 PF01266 FAD dependent oxidoreductase JJQ97_RS00370 PF01293 Phosphoenolpyruvate carboxykinase JJQ97_RS00375 PF01430 Hsp33 protein JJQ97_RS00380 PF01479 S4 domain JJQ97_RS00385 PF08495 FIST N domain JJQ97_RS00385 PF00563 EAL domain JJQ97_RS00385 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS00385 PF10442 FIST C domain JJQ97_RS00390 PF18030 RimK PreATP-grasp domain JJQ97_RS00390 PF08443 RimK-like ATP-grasp domain JJQ97_RS00395 PF08443 RimK-like ATP-grasp domain JJQ97_RS00395 PF18030 RimK PreATP-grasp domain JJQ97_RS00400 PF00375 Sodium:dicarboxylate symporter family JJQ97_RS00405 PF13417 Glutathione S-transferase, N-terminal domain JJQ97_RS00405 PF14497 Glutathione S-transferase, C-terminal domain JJQ97_RS00420 PF01295 Adenylate cyclase, class-I JJQ97_RS00420 PF12633 Adenylate cyclase NT domain JJQ97_RS00425 PF14760 Rnk N-terminus JJQ97_RS00425 PF01272 Transcription elongation factor, GreA/GreB, C-term JJQ97_RS00435 PF01491 Frataxin-like domain JJQ97_RS00440 PF13627 Prokaryotic lipoprotein-attachment site JJQ97_RS00445 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JJQ97_RS00445 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JJQ97_RS00450 PF01678 Diaminopimelate epimerase JJQ97_RS00460 PF00589 Phage integrase family JJQ97_RS00460 PF02899 Phage integrase, N-terminal SAM-like domain JJQ97_RS00475 PF01894 Uncharacterised protein family UPF0047 JJQ97_RS00480 PF00909 Ammonium Transporter Family JJQ97_RS00485 PF00543 Nitrogen regulatory protein P-II JJQ97_RS00490 PF04380 Membrane fusogenic activity JJQ97_RS00500 PF12833 Helix-turn-helix domain JJQ97_RS00500 PF06719 AraC-type transcriptional regulator N-terminus JJQ97_RS00505 PF00106 short chain dehydrogenase JJQ97_RS00515 PF01078 Magnesium chelatase, subunit ChlI JJQ97_RS00515 PF13335 Magnesium chelatase, subunit ChlI C-terminal JJQ97_RS00555 PF13464 Domain of unknown function (DUF4115) JJQ97_RS00605 PF01078 Magnesium chelatase, subunit ChlI JJQ97_RS00605 PF13335 Magnesium chelatase, subunit ChlI C-terminal JJQ97_RS00615 PF02146 Sir2 family JJQ97_RS00630 PF00005 ABC transporter JJQ97_RS00635 PF12704 MacB-like periplasmic core domain JJQ97_RS00635 PF02687 FtsX-like permease family JJQ97_RS00635 PF00005 ABC transporter JJQ97_RS00695 PF00665 Integrase core domain JJQ97_RS00710 PF03600 Citrate transporter JJQ97_RS00720 PF17191 RecG wedge domain JJQ97_RS00720 PF00271 Helicase conserved C-terminal domain JJQ97_RS00720 PF00270 DEAD/DEAH box helicase JJQ97_RS00725 PF03466 LysR substrate binding domain JJQ97_RS00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS00730 PF03544 Gram-negative bacterial TonB protein C-terminal JJQ97_RS00735 PF02472 Biopolymer transport protein ExbD/TolR JJQ97_RS00740 PF01618 MotA/TolQ/ExbB proton channel family JJQ97_RS00745 PF01370 NAD dependent epimerase/dehydratase family JJQ97_RS00755 PF01042 Endoribonuclease L-PSP JJQ97_RS00760 PF04607 Region found in RelA / SpoT proteins JJQ97_RS00760 PF13291 ACT domain JJQ97_RS00760 PF02824 TGS domain JJQ97_RS00765 PF01192 RNA polymerase Rpb6 JJQ97_RS00770 PF00625 Guanylate kinase JJQ97_RS00775 PF08340 Domain of unknown function (DUF1732) JJQ97_RS00775 PF03755 YicC-like family, N-terminal region JJQ97_RS00780 PF01138 3' exoribonuclease family, domain 1 JJQ97_RS00780 PF03725 3' exoribonuclease family, domain 2 JJQ97_RS00790 PF03372 Endonuclease/Exonuclease/phosphatase family JJQ97_RS00795 PF00156 Phosphoribosyl transferase domain JJQ97_RS00810 PF00696 Amino acid kinase family JJQ97_RS00815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JJQ97_RS00815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JJQ97_RS00815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JJQ97_RS00815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JJQ97_RS00820 PF00692 dUTPase JJQ97_RS00825 PF04127 DNA / pantothenate metabolism flavoprotein JJQ97_RS00825 PF02441 Flavoprotein JJQ97_RS00830 PF04002 RadC-like JAB domain JJQ97_RS00835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS00840 PF00830 Ribosomal L28 family JJQ97_RS00845 PF00471 Ribosomal protein L33 JJQ97_RS00855 PF00171 Aldehyde dehydrogenase family JJQ97_RS00865 PF13091 PLD-like domain JJQ97_RS00870 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS00870 PF00155 Aminotransferase class I and II JJQ97_RS00880 PF01266 FAD dependent oxidoreductase JJQ97_RS00890 PF01037 Lrp/AsnC ligand binding domain JJQ97_RS00895 PF01266 FAD dependent oxidoreductase JJQ97_RS00905 PF00842 Alanine racemase, C-terminal domain JJQ97_RS00905 PF01168 Alanine racemase, N-terminal domain JJQ97_RS00915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ97_RS00920 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JJQ97_RS00920 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JJQ97_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS00945 PF01571 Aminomethyltransferase folate-binding domain JJQ97_RS00945 PF08669 Glycine cleavage T-protein C-terminal barrel domain JJQ97_RS00950 PF01597 Glycine cleavage H-protein JJQ97_RS00955 PF01609 Transposase DDE domain JJQ97_RS00955 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS00955 PF01609 Transposase DDE domain JJQ97_RS00955 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS00965 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JJQ97_RS00965 PF00437 Type II/IV secretion system protein JJQ97_RS00975 PF01037 Lrp/AsnC ligand binding domain JJQ97_RS00975 PF13404 AsnC-type helix-turn-helix domain JJQ97_RS00985 PF01546 Peptidase family M20/M25/M40 JJQ97_RS00985 PF07687 Peptidase dimerisation domain JJQ97_RS00990 PF00696 Amino acid kinase family JJQ97_RS00990 PF00583 Acetyltransferase (GNAT) family JJQ97_RS00995 PF04262 Glutamate-cysteine ligase JJQ97_RS01000 PF03061 Thioesterase superfamily JJQ97_RS01005 PF00575 S1 RNA binding domain JJQ97_RS01005 PF16921 Tex protein YqgF-like domain JJQ97_RS01005 PF09371 Tex-like protein N-terminal domain JJQ97_RS01005 PF17674 HHH domain JJQ97_RS01010 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS01010 PF00072 Response regulator receiver domain JJQ97_RS01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS01015 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS01015 PF00672 HAMP domain JJQ97_RS01040 PF00158 Sigma-54 interaction domain JJQ97_RS01040 PF00072 Response regulator receiver domain JJQ97_RS01040 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS01045 PF00672 HAMP domain JJQ97_RS01045 PF08448 PAS fold JJQ97_RS01045 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS01045 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB JJQ97_RS01045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS01050 PF01510 N-acetylmuramoyl-L-alanine amidase JJQ97_RS01055 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS01065 PF01323 DSBA-like thioredoxin domain JJQ97_RS01070 PF01926 50S ribosome-binding GTPase JJQ97_RS01075 PF01612 3'-5' exonuclease JJQ97_RS01075 PF01367 5'-3' exonuclease, C-terminal SAM fold JJQ97_RS01075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JJQ97_RS01075 PF00476 DNA polymerase family A JJQ97_RS01085 PF01636 Phosphotransferase enzyme family JJQ97_RS01090 PF01297 Zinc-uptake complex component A periplasmic JJQ97_RS01095 PF01475 Ferric uptake regulator family JJQ97_RS01100 PF00005 ABC transporter JJQ97_RS01105 PF00950 ABC 3 transport family JJQ97_RS01115 PF00199 Catalase JJQ97_RS01115 PF06628 Catalase-related immune-responsive JJQ97_RS01115 PF18011 C-terminal domain found in long catalases JJQ97_RS01120 PF00005 ABC transporter JJQ97_RS01120 PF09383 NIL domain JJQ97_RS01125 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS01130 PF03180 NLPA lipoprotein JJQ97_RS01140 PF02630 SCO1/SenC JJQ97_RS01145 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JJQ97_RS01155 PF00916 Sulfate permease family JJQ97_RS01155 PF01740 STAS domain JJQ97_RS01160 PF00484 Carbonic anhydrase JJQ97_RS01165 PF04055 Radical SAM superfamily JJQ97_RS01175 PF09335 SNARE associated Golgi protein JJQ97_RS01180 PF00490 Delta-aminolevulinic acid dehydratase JJQ97_RS01185 PF13090 Polyphosphate kinase C-terminal domain 2 JJQ97_RS01185 PF02503 Polyphosphate kinase middle domain JJQ97_RS01185 PF13089 Polyphosphate kinase N-terminal domain JJQ97_RS01185 PF17941 Polyphosphate kinase C-terminal domain 1 JJQ97_RS01190 PF02541 Ppx/GppA phosphatase family JJQ97_RS01195 PF00005 ABC transporter JJQ97_RS01200 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS01205 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS01210 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS01215 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS01215 PF07729 FCD domain JJQ97_RS01220 PF00085 Thioredoxin JJQ97_RS01225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJQ97_RS01225 PF07498 Rho termination factor, N-terminal domain JJQ97_RS01225 PF07497 Rho termination factor, RNA-binding domain JJQ97_RS01230 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JJQ97_RS01235 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ97_RS01235 PF00970 Oxidoreductase FAD-binding domain JJQ97_RS01235 PF00175 Oxidoreductase NAD-binding domain JJQ97_RS01245 PF07690 Major Facilitator Superfamily JJQ97_RS01255 PF00698 Acyl transferase domain JJQ97_RS01255 PF00107 Zinc-binding dehydrogenase JJQ97_RS01255 PF16197 Ketoacyl-synthetase C-terminal extension JJQ97_RS01255 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS01255 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ97_RS01255 PF14765 Polyketide synthase dehydratase JJQ97_RS01255 PF08659 KR domain JJQ97_RS01255 PF00550 Phosphopantetheine attachment site JJQ97_RS01255 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ97_RS01275 PF01812 5-formyltetrahydrofolate cyclo-ligase family JJQ97_RS01285 PF05164 Cell division protein ZapA JJQ97_RS01295 PF03695 Uncharacterised protein family (UPF0149) JJQ97_RS01300 PF00557 Metallopeptidase family M24 JJQ97_RS01300 PF05195 Aminopeptidase P, N-terminal domain JJQ97_RS01305 PF01494 FAD binding domain JJQ97_RS01310 PF01494 FAD binding domain JJQ97_RS01315 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ97_RS01315 PF12833 Helix-turn-helix domain JJQ97_RS01320 PF07690 Major Facilitator Superfamily JJQ97_RS01330 PF00158 Sigma-54 interaction domain JJQ97_RS01335 PF03180 NLPA lipoprotein JJQ97_RS01350 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JJQ97_RS01355 PF00005 ABC transporter JJQ97_RS01360 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS01400 PF00529 HlyD membrane-fusion protein of T1SS JJQ97_RS01400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS01405 PF13533 Biotin-lipoyl like JJQ97_RS01410 PF00873 AcrB/AcrD/AcrF family JJQ97_RS01420 PF08003 Protein of unknown function (DUF1698) JJQ97_RS01425 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS01430 PF00005 ABC transporter JJQ97_RS01430 PF09383 NIL domain JJQ97_RS01435 PF03180 NLPA lipoprotein JJQ97_RS01440 PF00296 Luciferase-like monooxygenase JJQ97_RS01445 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS01445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS01450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS01450 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS01460 PF00005 ABC transporter JJQ97_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS01470 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS01475 PF00291 Pyridoxal-phosphate dependent enzyme JJQ97_RS01480 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ97_RS01490 PF04542 Sigma-70 region 2 JJQ97_RS01490 PF04545 Sigma-70, region 4 JJQ97_RS01500 PF06965 Na+/H+ antiporter 1 JJQ97_RS01505 PF05962 HutD JJQ97_RS01510 PF07702 UTRA domain JJQ97_RS01510 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS01515 PF01979 Amidohydrolase family JJQ97_RS01520 PF08212 Lipocalin-like domain JJQ97_RS01530 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JJQ97_RS01545 PF00343 Carbohydrate phosphorylase JJQ97_RS01550 PF00561 alpha/beta hydrolase fold JJQ97_RS01555 PF02580 D-Tyr-tRNA(Tyr) deacylase JJQ97_RS01560 PF04349 Periplasmic glucan biosynthesis protein, MdoG JJQ97_RS01565 PF00535 Glycosyl transferase family 2 JJQ97_RS01570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS01570 PF16591 Helical bimodular sensor domain JJQ97_RS01570 PF00672 HAMP domain JJQ97_RS01575 PF00672 HAMP domain JJQ97_RS01575 PF16591 Helical bimodular sensor domain JJQ97_RS01575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS01585 PF00902 Sec-independent protein translocase protein (TatC) JJQ97_RS01590 PF02416 mttA/Hcf106 family JJQ97_RS01595 PF02416 mttA/Hcf106 family JJQ97_RS01600 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JJQ97_RS01605 PF01502 Phosphoribosyl-AMP cyclohydrolase JJQ97_RS01610 PF03109 ABC1 family JJQ97_RS01620 PF01209 ubiE/COQ5 methyltransferase family JJQ97_RS01645 PF07724 AAA domain (Cdc48 subfamily) JJQ97_RS01645 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS01650 PF00227 Proteasome subunit JJQ97_RS01660 PF03485 Arginyl tRNA synthetase N terminal domain JJQ97_RS01660 PF00750 tRNA synthetases class I (R) JJQ97_RS01660 PF05746 DALR anticodon binding domain JJQ97_RS01665 PF18074 Primosomal protein N C-terminal domain JJQ97_RS01665 PF00271 Helicase conserved C-terminal domain JJQ97_RS01665 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JJQ97_RS01665 PF00270 DEAD/DEAH box helicase JJQ97_RS01665 PF17764 3′ DNA-binding domain (3′BD) JJQ97_RS01670 PF01197 Ribosomal protein L31 JJQ97_RS01680 PF00390 Malic enzyme, N-terminal domain JJQ97_RS01680 PF03949 Malic enzyme, NAD binding domain JJQ97_RS01685 PF00905 Penicillin binding protein transpeptidase domain JJQ97_RS01685 PF17092 Penicillin-binding protein OB-like domain JJQ97_RS01685 PF00912 Transglycosylase JJQ97_RS01690 PF11104 Type IV pilus assembly protein PilM; JJQ97_RS01695 PF05137 Fimbrial assembly protein (PilN) JJQ97_RS01700 PF04350 Pilus assembly protein, PilO JJQ97_RS01705 PF04351 Pilus assembly protein, PilP JJQ97_RS01710 PF07660 Secretin and TonB N terminus short domain JJQ97_RS01710 PF11741 AMIN domain JJQ97_RS01710 PF00263 Bacterial type II and III secretion system protein JJQ97_RS01710 PF03958 Bacterial type II/III secretion system short domain JJQ97_RS01715 PF01202 Shikimate kinase JJQ97_RS01720 PF01761 3-dehydroquinate synthase JJQ97_RS01730 PF00310 Glutamine amidotransferases class-II JJQ97_RS01730 PF04898 Glutamate synthase central domain JJQ97_RS01730 PF01645 Conserved region in glutamate synthase JJQ97_RS01730 PF01493 GXGXG motif JJQ97_RS01735 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS01735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JJQ97_RS01740 PF01425 Amidase JJQ97_RS01750 PF01208 Uroporphyrinogen decarboxylase (URO-D) JJQ97_RS01755 PF07969 Amidohydrolase family JJQ97_RS01760 PF01380 SIS domain JJQ97_RS01760 PF01418 Helix-turn-helix domain, rpiR family JJQ97_RS01760 PF02685 Glucokinase JJQ97_RS01765 PF02447 GntP family permease JJQ97_RS01775 PF02463 RecF/RecN/SMC N terminal domain JJQ97_RS01780 PF07690 Major Facilitator Superfamily JJQ97_RS01785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS01785 PF03466 LysR substrate binding domain JJQ97_RS01795 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ97_RS01795 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ97_RS01810 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ97_RS01810 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ97_RS01820 PF08241 Methyltransferase domain JJQ97_RS01825 PF04820 Tryptophan halogenase JJQ97_RS01855 PF07977 FabA-like domain JJQ97_RS01865 PF00550 Phosphopantetheine attachment site JJQ97_RS01870 PF00550 Phosphopantetheine attachment site JJQ97_RS01885 PF13614 AAA domain JJQ97_RS01895 PF16957 Malonate decarboxylase, alpha subunit, transporter JJQ97_RS01900 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JJQ97_RS01905 PF06857 Malonate decarboxylase delta subunit (MdcD) JJQ97_RS01910 PF01039 Carboxyl transferase domain JJQ97_RS01920 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JJQ97_RS01925 PF00698 Acyl transferase domain JJQ97_RS01940 PF03466 LysR substrate binding domain JJQ97_RS01940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS01945 PF03006 Haemolysin-III related JJQ97_RS01950 PF04452 RNA methyltransferase JJQ97_RS01955 PF00202 Aminotransferase class-III JJQ97_RS01960 PF01593 Flavin containing amine oxidoreductase JJQ97_RS01965 PF01292 Prokaryotic cytochrome b561 JJQ97_RS01970 PF04264 YceI-like domain JJQ97_RS01975 PF00270 DEAD/DEAH box helicase JJQ97_RS01975 PF00271 Helicase conserved C-terminal domain JJQ97_RS01980 PF02219 Methylenetetrahydrofolate reductase JJQ97_RS01985 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JJQ97_RS01985 PF05221 S-adenosyl-L-homocysteine hydrolase JJQ97_RS01995 PF01261 Xylose isomerase-like TIM barrel JJQ97_RS02000 PF02447 GntP family permease JJQ97_RS02005 PF00596 Class II Aldolase and Adducin N-terminal domain JJQ97_RS02010 PF07005 Sugar-binding N-terminal domain JJQ97_RS02010 PF17042 Nucleotide-binding C-terminal domain JJQ97_RS02015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JJQ97_RS02015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JJQ97_RS02025 PF00155 Aminotransferase class I and II JJQ97_RS02030 PF00920 Dehydratase family JJQ97_RS02045 PF04055 Radical SAM superfamily JJQ97_RS02045 PF06969 HemN C-terminal domain JJQ97_RS02050 PF01725 Ham1 family JJQ97_RS02055 PF00561 alpha/beta hydrolase fold JJQ97_RS02055 PF07021 Methionine biosynthesis protein MetW JJQ97_RS02060 PF00561 alpha/beta hydrolase fold JJQ97_RS02065 PF02325 YGGT family JJQ97_RS02070 PF03807 NADP oxidoreductase coenzyme F420-dependent JJQ97_RS02070 PF14748 Pyrroline-5-carboxylate reductase dimerisation JJQ97_RS02075 PF01168 Alanine racemase, N-terminal domain JJQ97_RS02080 PF00437 Type II/IV secretion system protein JJQ97_RS02085 PF00877 NlpC/P60 family JJQ97_RS02095 PF01979 Amidohydrolase family JJQ97_RS02100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JJQ97_RS02100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JJQ97_RS02105 PF00156 Phosphoribosyl transferase domain JJQ97_RS02110 PF03652 Holliday junction resolvase JJQ97_RS02115 PF02622 Uncharacterized ACR, COG1678 JJQ97_RS02125 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JJQ97_RS02125 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JJQ97_RS02130 PF00072 Response regulator receiver domain JJQ97_RS02135 PF00072 Response regulator receiver domain JJQ97_RS02140 PF01584 CheW-like domain JJQ97_RS02145 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JJQ97_RS02145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS02150 PF01584 CheW-like domain JJQ97_RS02150 PF02895 Signal transducing histidine kinase, homodimeric domain JJQ97_RS02150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS02150 PF07194 P2 response regulator binding domain JJQ97_RS02150 PF01627 Hpt domain JJQ97_RS02160 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JJQ97_RS02165 PF07729 FCD domain JJQ97_RS02165 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS02170 PF01566 Natural resistance-associated macrophage protein JJQ97_RS02175 PF03746 LamB/YcsF family JJQ97_RS02180 PF07286 Protein of unknown function (DUF1445) JJQ97_RS02185 PF02626 Carboxyltransferase domain, subdomain A and B JJQ97_RS02190 PF00364 Biotin-requiring enzyme JJQ97_RS02190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ97_RS02190 PF00289 Biotin carboxylase, N-terminal domain JJQ97_RS02190 PF02785 Biotin carboxylase C-terminal domain JJQ97_RS02195 PF12794 Mechanosensitive ion channel inner membrane domain 1 JJQ97_RS02195 PF12795 Mechanosensitive ion channel porin domain JJQ97_RS02195 PF00924 Mechanosensitive ion channel JJQ97_RS02200 PF02080 TrkA-C domain JJQ97_RS02200 PF00999 Sodium/hydrogen exchanger family JJQ97_RS02200 PF03471 Transporter associated domain JJQ97_RS02215 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ97_RS02215 PF12806 Acetyl-CoA dehydrogenase C-terminal like JJQ97_RS02215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS02215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS02220 PF14850 DNA-binding domain of Proline dehydrogenase JJQ97_RS02220 PF01619 Proline dehydrogenase JJQ97_RS02220 PF00171 Aldehyde dehydrogenase family JJQ97_RS02220 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JJQ97_RS02225 PF00474 Sodium:solute symporter family JJQ97_RS02235 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS02235 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS02235 PF00563 EAL domain JJQ97_RS02240 PF01863 Protein of unknown function DUF45 JJQ97_RS02250 PF13673 Acetyltransferase (GNAT) domain JJQ97_RS02260 PF12805 FUSC-like inner membrane protein yccS JJQ97_RS02270 PF00270 DEAD/DEAH box helicase JJQ97_RS02270 PF00271 Helicase conserved C-terminal domain JJQ97_RS02270 PF03880 DbpA RNA binding domain JJQ97_RS02275 PF00899 ThiF family JJQ97_RS02285 PF00364 Biotin-requiring enzyme JJQ97_RS02285 PF02817 e3 binding domain JJQ97_RS02285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JJQ97_RS02290 PF17831 Pyruvate dehydrogenase E1 component middle domain JJQ97_RS02290 PF00456 Transketolase, thiamine diphosphate binding domain JJQ97_RS02295 PF03710 Glutamate-ammonia ligase adenylyltransferase JJQ97_RS02295 PF08335 GlnD PII-uridylyltransferase JJQ97_RS02300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JJQ97_RS02305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JJQ97_RS02310 PF00534 Glycosyl transferases group 1 JJQ97_RS02310 PF13439 Glycosyltransferase Family 4 JJQ97_RS02340 PF02543 Carbamoyltransferase N-terminus JJQ97_RS02340 PF16861 Carbamoyltransferase C-terminus JJQ97_RS02345 PF13439 Glycosyltransferase Family 4 JJQ97_RS02380 PF00005 ABC transporter JJQ97_RS02380 PF00664 ABC transporter transmembrane region JJQ97_RS02385 PF00294 pfkB family carbohydrate kinase JJQ97_RS02385 PF01467 Cytidylyltransferase-like JJQ97_RS02395 PF00248 Aldo/keto reductase family JJQ97_RS02400 PF01266 FAD dependent oxidoreductase JJQ97_RS02405 PF00893 Small Multidrug Resistance protein JJQ97_RS02410 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JJQ97_RS02415 PF02321 Outer membrane efflux protein JJQ97_RS02420 PF13667 ThiC-associated domain JJQ97_RS02420 PF01964 Radical SAM ThiC family JJQ97_RS02435 PF00293 NUDIX domain JJQ97_RS02450 PF00149 Calcineurin-like phosphoesterase JJQ97_RS02455 PF05728 Uncharacterised protein family (UPF0227) JJQ97_RS02460 PF00986 DNA gyrase B subunit, carboxyl terminus JJQ97_RS02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS02460 PF00204 DNA gyrase B JJQ97_RS02460 PF01751 Toprim domain JJQ97_RS02475 PF03989 DNA gyrase C-terminal domain, beta-propeller JJQ97_RS02475 PF00521 DNA gyrase/topoisomerase IV, subunit A JJQ97_RS02500 PF02666 Phosphatidylserine decarboxylase JJQ97_RS02510 PF01618 MotA/TolQ/ExbB proton channel family JJQ97_RS02515 PF13677 Membrane MotB of proton-channel complex MotA/MotB JJQ97_RS02515 PF00691 OmpA family JJQ97_RS02520 PF03193 RsgA GTPase JJQ97_RS02525 PF00929 Exonuclease JJQ97_RS02530 PF03458 UPF0126 domain JJQ97_RS02535 PF08331 Domain of unknown function (DUF1730) JJQ97_RS02540 PF01256 Carbohydrate kinase JJQ97_RS02540 PF03853 YjeF-related protein N-terminus JJQ97_RS02545 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JJQ97_RS02550 PF01520 N-acetylmuramoyl-L-alanine amidase JJQ97_RS02550 PF11741 AMIN domain JJQ97_RS02555 PF08676 MutL C terminal dimerisation domain JJQ97_RS02555 PF01119 DNA mismatch repair protein, C-terminal domain JJQ97_RS02565 PF17209 Hfq protein JJQ97_RS02570 PF16360 GTP-binding GTPase Middle Region JJQ97_RS02570 PF13167 GTP-binding GTPase N-terminal JJQ97_RS02570 PF01926 50S ribosome-binding GTPase JJQ97_RS02575 PF01145 SPFH domain / Band 7 family JJQ97_RS02580 PF01145 SPFH domain / Band 7 family JJQ97_RS02585 PF13393 Histidyl-tRNA synthetase JJQ97_RS02590 PF00709 Adenylosuccinate synthetase JJQ97_RS02595 PF17200 Single Cache domain 2 JJQ97_RS02595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS02595 PF00672 HAMP domain JJQ97_RS02615 PF00773 RNB domain JJQ97_RS02615 PF17876 Cold shock domain JJQ97_RS02615 PF00575 S1 RNA binding domain JJQ97_RS02615 PF08461 Ribonuclease R winged-helix domain JJQ97_RS02615 PF08206 Ribonuclease B OB domain JJQ97_RS02620 PF00588 SpoU rRNA Methylase family JJQ97_RS02620 PF08032 RNA 2'-O ribose methyltransferase substrate binding JJQ97_RS02625 PF01250 Ribosomal protein S6 JJQ97_RS02630 PF01084 Ribosomal protein S18 JJQ97_RS02640 PF03948 Ribosomal protein L9, C-terminal domain JJQ97_RS02640 PF01281 Ribosomal protein L9, N-terminal domain JJQ97_RS02645 PF03796 DnaB-like helicase C terminal domain JJQ97_RS02645 PF00772 DnaB-like helicase N terminal domain JJQ97_RS02650 PF18807 Tripartite Tc toxins repeat JJQ97_RS02650 PF14431 YwqJ-like deaminase JJQ97_RS02655 PF04055 Radical SAM superfamily JJQ97_RS02655 PF08497 Radical SAM N-terminal JJQ97_RS02655 PF11842 Domain of unknown function (DUF3362) JJQ97_RS02665 PF14403 Circularly permuted ATP-grasp type 2 JJQ97_RS02665 PF04168 A predicted alpha-helical domain with a conserved ER motif. JJQ97_RS02675 PF00127 Copper binding proteins, plastocyanin/azurin family JJQ97_RS02685 PF02540 NAD synthase JJQ97_RS02690 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JJQ97_RS02690 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JJQ97_RS02695 PF03466 LysR substrate binding domain JJQ97_RS02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS02700 PF13458 Periplasmic binding protein JJQ97_RS02705 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS02710 PF11862 Domain of unknown function (DUF3382) JJQ97_RS02710 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS02715 PF00005 ABC transporter JJQ97_RS02715 PF12399 Branched-chain amino acid ATP-binding cassette transporter JJQ97_RS02720 PF00005 ABC transporter JJQ97_RS02725 PF00106 short chain dehydrogenase JJQ97_RS02735 PF02780 Transketolase, C-terminal domain JJQ97_RS02735 PF02779 Transketolase, pyrimidine binding domain JJQ97_RS02735 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JJQ97_RS02740 PF00348 Polyprenyl synthetase JJQ97_RS02745 PF02609 Exonuclease VII small subunit JJQ97_RS02750 PF01053 Cys/Met metabolism PLP-dependent enzyme JJQ97_RS02760 PF02798 Glutathione S-transferase, N-terminal domain JJQ97_RS02765 PF01061 ABC-2 type transporter JJQ97_RS02770 PF00005 ABC transporter JJQ97_RS02785 PF13419 Haloacid dehalogenase-like hydrolase JJQ97_RS02835 PF01381 Helix-turn-helix JJQ97_RS02835 PF00717 Peptidase S24-like JJQ97_RS02840 PF00719 Inorganic pyrophosphatase JJQ97_RS02845 PF06167 Glucose-regulated metallo-peptidase M90 JJQ97_RS02850 PF09335 SNARE associated Golgi protein JJQ97_RS02855 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JJQ97_RS02860 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JJQ97_RS02865 PF00171 Aldehyde dehydrogenase family JJQ97_RS02870 PF02875 Mur ligase family, glutamate ligase domain JJQ97_RS02870 PF08245 Mur ligase middle domain JJQ97_RS02870 PF01225 Mur ligase family, catalytic domain JJQ97_RS02875 PF02441 Flavoprotein JJQ97_RS02885 PF13460 NAD(P)H-binding JJQ97_RS02895 PF01575 MaoC like domain JJQ97_RS02900 PF03788 LrgA family JJQ97_RS02905 PF04172 LrgB-like family JJQ97_RS02925 PF13847 Methyltransferase domain JJQ97_RS02945 PF00108 Thiolase, N-terminal domain JJQ97_RS02945 PF02803 Thiolase, C-terminal domain JJQ97_RS02960 PF13593 SBF-like CPA transporter family (DUF4137) JJQ97_RS02965 PF02311 AraC-like ligand binding domain JJQ97_RS02965 PF12833 Helix-turn-helix domain JJQ97_RS02975 PF00376 MerR family regulatory protein JJQ97_RS02975 PF09278 MerR, DNA binding JJQ97_RS02980 PF00403 Heavy-metal-associated domain JJQ97_RS02995 PF07690 Major Facilitator Superfamily JJQ97_RS03000 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS03000 PF00107 Zinc-binding dehydrogenase JJQ97_RS03005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS03005 PF03466 LysR substrate binding domain JJQ97_RS03015 PF00962 Adenosine/AMP deaminase JJQ97_RS03020 PF03171 2OG-Fe(II) oxygenase superfamily JJQ97_RS03020 PF14226 non-haem dioxygenase in morphine synthesis N-terminal JJQ97_RS03025 PF02608 ABC transporter substrate-binding protein PnrA-like JJQ97_RS03030 PF00005 ABC transporter JJQ97_RS03035 PF01032 FecCD transport family JJQ97_RS03040 PF01032 FecCD transport family JJQ97_RS03045 PF01497 Periplasmic binding protein JJQ97_RS03050 PF01699 Sodium/calcium exchanger protein JJQ97_RS03055 PF01979 Amidohydrolase family JJQ97_RS03065 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS03070 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS03075 PF00005 ABC transporter JJQ97_RS03080 PF01205 Uncharacterized protein family UPF0029 JJQ97_RS03085 PF08362 YcdC-like protein, C-terminal region JJQ97_RS03085 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS03090 PF00860 Permease family JJQ97_RS03095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS03095 PF03466 LysR substrate binding domain JJQ97_RS03100 PF00202 Aminotransferase class-III JJQ97_RS03105 PF00171 Aldehyde dehydrogenase family JJQ97_RS03135 PF17946 RecC C-terminal domain JJQ97_RS03140 PF13361 UvrD-like helicase C-terminal domain JJQ97_RS03140 PF00580 UvrD/REP helicase N-terminal domain JJQ97_RS03140 PF12705 PD-(D/E)XK nuclease superfamily JJQ97_RS03145 PF13538 UvrD-like helicase C-terminal domain JJQ97_RS03180 PF00239 Resolvase, N terminal domain JJQ97_RS03180 PF02796 Helix-turn-helix domain of resolvase JJQ97_RS03215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS03215 PF03466 LysR substrate binding domain JJQ97_RS03220 PF00171 Aldehyde dehydrogenase family JJQ97_RS03225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JJQ97_RS03225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JJQ97_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS03245 PF00005 ABC transporter JJQ97_RS03255 PF02769 AIR synthase related protein, C-terminal domain JJQ97_RS03255 PF00586 AIR synthase related protein, N-terminal domain JJQ97_RS03270 PF00348 Polyprenyl synthetase JJQ97_RS03275 PF00829 Ribosomal prokaryotic L21 protein JJQ97_RS03280 PF01016 Ribosomal L27 protein JJQ97_RS03285 PF01926 50S ribosome-binding GTPase JJQ97_RS03285 PF01018 GTP1/OBG JJQ97_RS03290 PF00696 Amino acid kinase family JJQ97_RS03290 PF01472 PUA domain JJQ97_RS03295 PF05981 CreA protein JJQ97_RS03300 PF01649 Ribosomal protein S20 JJQ97_RS03305 PF03023 Lipid II flippase MurJ JJQ97_RS03310 PF01687 Riboflavin kinase JJQ97_RS03310 PF06574 FAD synthetase JJQ97_RS03315 PF06827 Zinc finger found in FPG and IleRS JJQ97_RS03315 PF00133 tRNA synthetases class I (I, L, M and V) JJQ97_RS03315 PF08264 Anticodon-binding domain of tRNA JJQ97_RS03320 PF01252 Signal peptidase (SPase) II JJQ97_RS03325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ97_RS03330 PF02401 LytB protein JJQ97_RS03335 PF00114 Pilin (bacterial filament) JJQ97_RS03335 PF07963 Prokaryotic N-terminal methylation motif JJQ97_RS03340 PF07963 Prokaryotic N-terminal methylation motif JJQ97_RS03340 PF00114 Pilin (bacterial filament) JJQ97_RS03360 PF05567 Neisseria PilC beta-propeller domain JJQ97_RS03370 PF01266 FAD dependent oxidoreductase JJQ97_RS03375 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS03375 PF00158 Sigma-54 interaction domain JJQ97_RS03375 PF00072 Response regulator receiver domain JJQ97_RS03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS03380 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS03390 PF13525 Outer membrane lipoprotein JJQ97_RS03395 PF00849 RNA pseudouridylate synthase JJQ97_RS03395 PF01479 S4 domain JJQ97_RS03400 PF02578 Multi-copper polyphenol oxidoreductase laccase JJQ97_RS03405 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ97_RS03405 PF17871 AAA lid domain JJQ97_RS03405 PF02861 Clp amino terminal domain, pathogenicity island component JJQ97_RS03405 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS03405 PF07724 AAA domain (Cdc48 subfamily) JJQ97_RS03430 PF00589 Phage integrase family JJQ97_RS03430 PF02899 Phage integrase, N-terminal SAM-like domain JJQ97_RS03440 PF02586 SOS response associated peptidase (SRAP) JJQ97_RS03445 PF00717 Peptidase S24-like JJQ97_RS03450 PF13438 Domain of unknown function (DUF4113) JJQ97_RS03450 PF00817 impB/mucB/samB family JJQ97_RS03450 PF11799 impB/mucB/samB family C-terminal domain JJQ97_RS03450 PF11798 IMS family HHH motif JJQ97_RS03700 PF01751 Toprim domain JJQ97_RS03700 PF01131 DNA topoisomerase JJQ97_RS03710 PF00589 Phage integrase family JJQ97_RS03710 PF02899 Phage integrase, N-terminal SAM-like domain JJQ97_RS03725 PF03466 LysR substrate binding domain JJQ97_RS03725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS03740 PF00719 Inorganic pyrophosphatase JJQ97_RS03745 PF03952 Enolase, N-terminal domain JJQ97_RS03745 PF00113 Enolase, C-terminal TIM barrel domain JJQ97_RS03770 PF00654 Voltage gated chloride channel JJQ97_RS03780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JJQ97_RS03785 PF00376 MerR family regulatory protein JJQ97_RS03785 PF09278 MerR, DNA binding JJQ97_RS03800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS03800 PF00672 HAMP domain JJQ97_RS03800 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS03810 PF02899 Phage integrase, N-terminal SAM-like domain JJQ97_RS03810 PF00589 Phage integrase family JJQ97_RS03820 PF04917 Bacterial shufflon protein, N-terminal constant region JJQ97_RS03825 PF00437 Type II/IV secretion system protein JJQ97_RS03840 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JJQ97_RS03840 PF00437 Type II/IV secretion system protein JJQ97_RS03870 PF00176 SNF2 family N-terminal domain JJQ97_RS03870 PF00271 Helicase conserved C-terminal domain JJQ97_RS03925 PF03869 Arc-like DNA binding domain JJQ97_RS03940 PF00772 DnaB-like helicase N terminal domain JJQ97_RS03940 PF03796 DnaB-like helicase C terminal domain JJQ97_RS03955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JJQ97_RS03965 PF02638 Glycosyl hydrolase-like 10 JJQ97_RS03970 PF02435 Levansucrase/Invertase JJQ97_RS03980 PF00501 AMP-binding enzyme JJQ97_RS03980 PF00975 Thioesterase domain JJQ97_RS03980 PF00550 Phosphopantetheine attachment site JJQ97_RS03980 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS03980 PF00668 Condensation domain JJQ97_RS03990 PF00218 Indole-3-glycerol phosphate synthase JJQ97_RS03995 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS03995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS03995 PF00672 HAMP domain JJQ97_RS04000 PF00356 Bacterial regulatory proteins, lacI family JJQ97_RS04000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JJQ97_RS04005 PF00251 Glycosyl hydrolases family 32 N-terminal domain JJQ97_RS04005 PF08244 Glycosyl hydrolases family 32 C terminal JJQ97_RS04010 PF00005 ABC transporter JJQ97_RS04010 PF17912 MalK OB fold domain JJQ97_RS04015 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS04020 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS04025 PF01547 Bacterial extracellular solute-binding protein JJQ97_RS04030 PF11471 Maltoporin periplasmic N-terminal extension JJQ97_RS04030 PF02264 LamB porin JJQ97_RS04045 PF07274 Protein of unknown function (DUF1440) JJQ97_RS04050 PF03466 LysR substrate binding domain JJQ97_RS04050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS04060 PF13419 Haloacid dehalogenase-like hydrolase JJQ97_RS04065 PF04239 Protein of unknown function (DUF421) JJQ97_RS04075 PF01546 Peptidase family M20/M25/M40 JJQ97_RS04075 PF07687 Peptidase dimerisation domain JJQ97_RS04085 PF02126 Phosphotriesterase family JJQ97_RS04090 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS04095 PF00005 ABC transporter JJQ97_RS04100 PF13407 Periplasmic binding protein domain JJQ97_RS04105 PF00356 Bacterial regulatory proteins, lacI family JJQ97_RS04125 PF01339 CheB methylesterase JJQ97_RS04125 PF00072 Response regulator receiver domain JJQ97_RS04130 PF03975 CheD chemotactic sensory transduction JJQ97_RS04135 PF03705 CheR methyltransferase, all-alpha domain JJQ97_RS04135 PF01739 CheR methyltransferase, SAM binding domain JJQ97_RS04140 PF01584 CheW-like domain JJQ97_RS04145 PF00672 HAMP domain JJQ97_RS04145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS04145 PF02203 Tar ligand binding domain homologue JJQ97_RS04150 PF07194 P2 response regulator binding domain JJQ97_RS04150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS04150 PF01627 Hpt domain JJQ97_RS04150 PF02895 Signal transducing histidine kinase, homodimeric domain JJQ97_RS04150 PF01584 CheW-like domain JJQ97_RS04160 PF00072 Response regulator receiver domain JJQ97_RS04165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS04165 PF00672 HAMP domain JJQ97_RS04170 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS04190 PF03884 DNA gyrase inhibitor YacG JJQ97_RS04195 PF01121 Dephospho-CoA kinase JJQ97_RS04200 PF01478 Type IV leader peptidase family JJQ97_RS04200 PF06750 Bacterial Peptidase A24 N-terminal domain JJQ97_RS04205 PF00482 Type II secretion system (T2SS), protein F JJQ97_RS04210 PF00437 Type II/IV secretion system protein JJQ97_RS04210 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JJQ97_RS04215 PF00114 Pilin (bacterial filament) JJQ97_RS04215 PF07963 Prokaryotic N-terminal methylation motif JJQ97_RS04225 PF00043 Glutathione S-transferase, C-terminal domain JJQ97_RS04225 PF02798 Glutathione S-transferase, N-terminal domain JJQ97_RS04230 PF07509 Protein of unknown function (DUF1523) JJQ97_RS04240 PF02342 TerD domain JJQ97_RS04255 PF11202 Phosphoribosyl transferase (PRTase) JJQ97_RS04255 PF15608 PELOTA RNA binding domain JJQ97_RS04270 PF02342 TerD domain JJQ97_RS04275 PF02342 TerD domain JJQ97_RS04285 PF03741 Integral membrane protein TerC family JJQ97_RS04290 PF02342 TerD domain JJQ97_RS04295 PF02342 TerD domain JJQ97_RS04305 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JJQ97_RS04305 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JJQ97_RS04315 PF01510 N-acetylmuramoyl-L-alanine amidase JJQ97_RS04325 PF01026 TatD related DNase JJQ97_RS04330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JJQ97_RS04330 PF00356 Bacterial regulatory proteins, lacI family JJQ97_RS04335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JJQ97_RS04335 PF00381 PTS HPr component phosphorylation site JJQ97_RS04335 PF02896 PEP-utilising enzyme, TIM barrel domain JJQ97_RS04335 PF00391 PEP-utilising enzyme, mobile domain JJQ97_RS04335 PF05524 PEP-utilising enzyme, N-terminal JJQ97_RS04340 PF00294 pfkB family carbohydrate kinase JJQ97_RS04345 PF02378 Phosphotransferase system, EIIC JJQ97_RS04345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JJQ97_RS04350 PF00108 Thiolase, N-terminal domain JJQ97_RS04350 PF02803 Thiolase, C-terminal domain JJQ97_RS04360 PF00342 Phosphoglucose isomerase JJQ97_RS04365 PF02569 Pantoate-beta-alanine ligase JJQ97_RS04370 PF02548 Ketopantoate hydroxymethyltransferase JJQ97_RS04375 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JJQ97_RS04380 PF12627 Probable RNA and SrmB- binding site of polymerase A JJQ97_RS04380 PF01743 Poly A polymerase head domain JJQ97_RS04380 PF12626 Polymerase A arginine-rich C-terminus JJQ97_RS04385 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS04385 PF00158 Sigma-54 interaction domain JJQ97_RS04385 PF00072 Response regulator receiver domain JJQ97_RS04390 PF00989 PAS fold JJQ97_RS04390 PF08447 PAS fold JJQ97_RS04390 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS04400 PF00749 tRNA synthetases class I (E and Q), catalytic domain JJQ97_RS04405 PF01258 Prokaryotic dksA/traR C4-type zinc finger JJQ97_RS04410 PF00155 Aminotransferase class I and II JJQ97_RS04415 PF03749 Sugar fermentation stimulation protein RE domain JJQ97_RS04415 PF17746 SfsA N-terminal OB domain JJQ97_RS04425 PF01791 DeoC/LacD family aldolase JJQ97_RS04440 PF00912 Transglycosylase JJQ97_RS04440 PF00905 Penicillin binding protein transpeptidase domain JJQ97_RS04440 PF14814 Bifunctional transglycosylase second domain JJQ97_RS04460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ97_RS04460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ97_RS04460 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ97_RS04465 PF10369 Small subunit of acetolactate synthase JJQ97_RS04470 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JJQ97_RS04470 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JJQ97_RS04475 PF01066 CDP-alcohol phosphatidyltransferase JJQ97_RS04480 PF00174 Oxidoreductase molybdopterin binding domain JJQ97_RS04485 PF01794 Ferric reductase like transmembrane component JJQ97_RS04515 PF13229 Right handed beta helix region JJQ97_RS04540 PF00583 Acetyltransferase (GNAT) family JJQ97_RS04550 PF00484 Carbonic anhydrase JJQ97_RS04555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS04555 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS04555 PF00672 HAMP domain JJQ97_RS04560 PF01966 HD domain JJQ97_RS04565 PF01757 Acyltransferase family JJQ97_RS04570 PF03831 PhnA domain JJQ97_RS04570 PF08274 PhnA Zinc-Ribbon JJQ97_RS04575 PF04134 Protein of unknown function, DUF393 JJQ97_RS04580 PF07690 Major Facilitator Superfamily JJQ97_RS04585 PF01066 CDP-alcohol phosphatidyltransferase JJQ97_RS04595 PF00672 HAMP domain JJQ97_RS04595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS04595 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS04605 PF01590 GAF domain JJQ97_RS04605 PF00360 Phytochrome region JJQ97_RS04605 PF00563 EAL domain JJQ97_RS04605 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS04610 PF08447 PAS fold JJQ97_RS04610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS04610 PF13426 PAS domain JJQ97_RS04615 PF09423 PhoD-like phosphatase JJQ97_RS04615 PF16655 PhoD-like phosphatase, N-terminal domain JJQ97_RS04625 PF02472 Biopolymer transport protein ExbD/TolR JJQ97_RS04640 PF01618 MotA/TolQ/ExbB proton channel family JJQ97_RS04650 PF00583 Acetyltransferase (GNAT) family JJQ97_RS04665 PF08808 RES domain JJQ97_RS04670 PF09722 Protein of unknown function (DUF2384) JJQ97_RS04675 PF00158 Sigma-54 interaction domain JJQ97_RS04675 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS04675 PF00072 Response regulator receiver domain JJQ97_RS04685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JJQ97_RS04695 PF04545 Sigma-70, region 4 JJQ97_RS04695 PF04542 Sigma-70 region 2 JJQ97_RS04700 PF01850 PIN domain JJQ97_RS04705 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JJQ97_RS04720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JJQ97_RS04730 PF03480 Bacterial extracellular solute-binding protein, family 7 JJQ97_RS04735 PF08450 SMP-30/Gluconolactonase/LRE-like region JJQ97_RS04740 PF01370 NAD dependent epimerase/dehydratase family JJQ97_RS04745 PF03573 outer membrane porin, OprD family JJQ97_RS04755 PF16591 Helical bimodular sensor domain JJQ97_RS04755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS04755 PF00672 HAMP domain JJQ97_RS04760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS04760 PF02743 Cache domain JJQ97_RS04760 PF00672 HAMP domain JJQ97_RS04800 PF16363 GDP-mannose 4,6 dehydratase JJQ97_RS04805 PF16363 GDP-mannose 4,6 dehydratase JJQ97_RS04810 PF01061 ABC-2 type transporter JJQ97_RS04815 PF00005 ABC transporter JJQ97_RS04815 PF14524 Wzt C-terminal domain JJQ97_RS04825 PF13477 Glycosyl transferase 4-like JJQ97_RS04825 PF00534 Glycosyl transferases group 1 JJQ97_RS04840 PF00483 Nucleotidyl transferase JJQ97_RS04845 PF04321 RmlD substrate binding domain JJQ97_RS04850 PF16363 GDP-mannose 4,6 dehydratase JJQ97_RS04855 PF17843 MycE methyltransferase N-terminal JJQ97_RS04860 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JJQ97_RS04860 PF00535 Glycosyl transferase family 2 JJQ97_RS04865 PF00535 Glycosyl transferase family 2 JJQ97_RS04885 PF00664 ABC transporter transmembrane region JJQ97_RS04885 PF00005 ABC transporter JJQ97_RS04890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS04890 PF00529 HlyD membrane-fusion protein of T1SS JJQ97_RS04895 PF02321 Outer membrane efflux protein JJQ97_RS04900 PF00534 Glycosyl transferases group 1 JJQ97_RS04900 PF13439 Glycosyltransferase Family 4 JJQ97_RS04905 PF01050 Mannose-6-phosphate isomerase JJQ97_RS04905 PF00483 Nucleotidyl transferase JJQ97_RS04945 PF18821 Large polyvalent protein-associated domain 7 JJQ97_RS04945 PF03432 Relaxase/Mobilisation nuclease domain JJQ97_RS04985 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS04990 PF07690 Major Facilitator Superfamily JJQ97_RS04995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS04995 PF17200 Single Cache domain 2 JJQ97_RS04995 PF00672 HAMP domain JJQ97_RS05000 PF13817 IS66 C-terminal element JJQ97_RS05000 PF03050 Transposase IS66 family JJQ97_RS05000 PF13007 Transposase C of IS166 homeodomain JJQ97_RS05000 PF13005 zinc-finger binding domain of transposase IS66 JJQ97_RS05020 PF00248 Aldo/keto reductase family JJQ97_RS05025 PF12852 Cupin JJQ97_RS05025 PF12833 Helix-turn-helix domain JJQ97_RS05030 PF13005 zinc-finger binding domain of transposase IS66 JJQ97_RS05030 PF03050 Transposase IS66 family JJQ97_RS05030 PF13817 IS66 C-terminal element JJQ97_RS05030 PF13007 Transposase C of IS166 homeodomain JJQ97_RS05075 PF00589 Phage integrase family JJQ97_RS05075 PF13356 Arm DNA-binding domain JJQ97_RS05080 PF06071 Protein of unknown function (DUF933) JJQ97_RS05080 PF01926 50S ribosome-binding GTPase JJQ97_RS05085 PF01195 Peptidyl-tRNA hydrolase JJQ97_RS05090 PF01386 Ribosomal L25p family JJQ97_RS05090 PF14693 Ribosomal protein TL5, C-terminal domain JJQ97_RS05095 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JJQ97_RS05095 PF14572 Phosphoribosyl synthetase-associated domain JJQ97_RS05105 PF00288 GHMP kinases N terminal domain JJQ97_RS05105 PF08544 GHMP kinases C terminal JJQ97_RS05110 PF03550 Outer membrane lipoprotein LolB JJQ97_RS05120 PF01488 Shikimate / quinate 5-dehydrogenase JJQ97_RS05120 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JJQ97_RS05120 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JJQ97_RS05125 PF03462 PCRF domain JJQ97_RS05125 PF00472 RF-1 domain JJQ97_RS05130 PF17827 PrmC N-terminal domain JJQ97_RS05130 PF05175 Methyltransferase small domain JJQ97_RS05135 PF00899 ThiF family JJQ97_RS05140 PF01177 Asp/Glu/Hydantoin racemase JJQ97_RS05145 PF09411 Lipid A 3-O-deacylase (PagL) JJQ97_RS05170 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS05170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JJQ97_RS05175 PF00106 short chain dehydrogenase JJQ97_RS05185 PF00875 DNA photolyase JJQ97_RS05185 PF03441 FAD binding domain of DNA photolyase JJQ97_RS05190 PF13411 MerR HTH family regulatory protein JJQ97_RS05205 PF01593 Flavin containing amine oxidoreductase JJQ97_RS05210 PF08338 Domain of unknown function (DUF1731) JJQ97_RS05210 PF01370 NAD dependent epimerase/dehydratase family JJQ97_RS05215 PF00762 Ferrochelatase JJQ97_RS05220 PF00860 Permease family JJQ97_RS05230 PF00156 Phosphoribosyl transferase domain JJQ97_RS05245 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS05250 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS05260 PF06039 Malate:quinone oxidoreductase (Mqo) JJQ97_RS05300 PF02586 SOS response associated peptidase (SRAP) JJQ97_RS05305 PF01435 Peptidase family M48 JJQ97_RS05310 PF01169 Uncharacterized protein family UPF0016 JJQ97_RS05315 PF05175 Methyltransferase small domain JJQ97_RS05315 PF08468 Methyltransferase small domain N-terminal JJQ97_RS05320 PF01810 LysE type translocator JJQ97_RS05325 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS05325 PF00501 AMP-binding enzyme JJQ97_RS05335 PF07044 Protein of unknown function (DUF1329) JJQ97_RS05340 PF13191 AAA ATPase domain JJQ97_RS05340 PF00069 Protein kinase domain JJQ97_RS05345 PF01966 HD domain JJQ97_RS05345 PF11871 Domain of unknown function (DUF3391) JJQ97_RS05355 PF00691 OmpA family JJQ97_RS05355 PF13488 Glycine zipper JJQ97_RS05370 PF01553 Acyltransferase JJQ97_RS05375 PF01515 Phosphate acetyl/butaryl transferase JJQ97_RS05375 PF07085 DRTGG domain JJQ97_RS05385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ97_RS05390 PF00255 Glutathione peroxidase JJQ97_RS05395 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS05395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ97_RS05400 PF13439 Glycosyltransferase Family 4 JJQ97_RS05400 PF00534 Glycosyl transferases group 1 JJQ97_RS05430 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS05445 PF02152 Dihydroneopterin aldolase JJQ97_RS05450 PF01227 GTP cyclohydrolase I JJQ97_RS05470 PF00258 Flavodoxin JJQ97_RS05475 PF00106 short chain dehydrogenase JJQ97_RS05485 PF13369 Transglutaminase-like superfamily JJQ97_RS05500 PF13632 Glycosyl transferase family group 2 JJQ97_RS05500 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JJQ97_RS05510 PF02350 UDP-N-acetylglucosamine 2-epimerase JJQ97_RS05520 PF06146 Phosphate-starvation-inducible E JJQ97_RS05540 PF00593 TonB dependent receptor JJQ97_RS05540 PF07660 Secretin and TonB N terminus short domain JJQ97_RS05540 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS05545 PF04773 FecR protein JJQ97_RS05545 PF16220 Domain of unknown function (DUF4880) JJQ97_RS05555 PF12833 Helix-turn-helix domain JJQ97_RS05560 PF00892 EamA-like transporter family JJQ97_RS05570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ97_RS05570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ97_RS05575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS05575 PF03466 LysR substrate binding domain JJQ97_RS05580 PF02321 Outer membrane efflux protein JJQ97_RS05585 PF04632 Fusaric acid resistance protein family JJQ97_RS05595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS05595 PF00529 HlyD membrane-fusion protein of T1SS JJQ97_RS05600 PF00106 short chain dehydrogenase JJQ97_RS05610 PF05785 Rho-activating domain of cytotoxic necrotizing factor JJQ97_RS05610 PF18807 Tripartite Tc toxins repeat JJQ97_RS05615 PF01050 Mannose-6-phosphate isomerase JJQ97_RS05615 PF00483 Nucleotidyl transferase JJQ97_RS05620 PF11182 Alginate O-acetyl transferase AlgF JJQ97_RS05625 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX JJQ97_RS05630 PF03062 MBOAT, membrane-bound O-acyltransferase family JJQ97_RS05635 PF05426 Alginate lyase JJQ97_RS05640 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX JJQ97_RS05640 PF16824 C-terminal carbohydrate-binding module JJQ97_RS05645 PF13229 Right handed beta helix region JJQ97_RS05650 PF13372 Alginate export JJQ97_RS05655 PF08238 Sel1 repeat JJQ97_RS05660 PF07238 PilZ domain JJQ97_RS05670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JJQ97_RS05670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JJQ97_RS05670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JJQ97_RS05675 PF03883 Peroxide stress protein YaaA JJQ97_RS05680 PF01522 Polysaccharide deacetylase JJQ97_RS05685 PF02562 PhoH-like protein JJQ97_RS05685 PF13638 PIN domain JJQ97_RS05690 PF01967 MoaC family JJQ97_RS05695 PF02597 ThiS family JJQ97_RS05700 PF02391 MoaE protein JJQ97_RS05705 PF00271 Helicase conserved C-terminal domain JJQ97_RS05705 PF00270 DEAD/DEAH box helicase JJQ97_RS05710 PF02230 Phospholipase/Carboxylesterase JJQ97_RS05715 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS05720 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS05725 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS05730 PF00005 ABC transporter JJQ97_RS05735 PF07690 Major Facilitator Superfamily JJQ97_RS05745 PF01541 GIY-YIG catalytic domain JJQ97_RS05760 PF04245 37-kD nucleoid-associated bacterial protein JJQ97_RS05765 PF00216 Bacterial DNA-binding protein JJQ97_RS05770 PF05971 RNA methyltransferase JJQ97_RS05775 PF00133 tRNA synthetases class I (I, L, M and V) JJQ97_RS05775 PF08264 Anticodon-binding domain of tRNA JJQ97_RS05775 PF10458 Valyl tRNA synthetase tRNA binding arm JJQ97_RS05790 PF04364 DNA polymerase III chi subunit, HolC JJQ97_RS05795 PF02789 Cytosol aminopeptidase family, N-terminal domain JJQ97_RS05795 PF00883 Cytosol aminopeptidase family, catalytic domain JJQ97_RS05800 PF03739 Lipopolysaccharide export system permease LptF/LptG JJQ97_RS05805 PF03739 Lipopolysaccharide export system permease LptF/LptG JJQ97_RS05810 PF00313 'Cold-shock' DNA-binding domain JJQ97_RS05815 PF01571 Aminomethyltransferase folate-binding domain JJQ97_RS05815 PF08669 Glycine cleavage T-protein C-terminal barrel domain JJQ97_RS05820 PF02347 Glycine cleavage system P-protein JJQ97_RS05825 PF01597 Glycine cleavage H-protein JJQ97_RS05830 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS05830 PF00563 EAL domain JJQ97_RS05830 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS05835 PF00072 Response regulator receiver domain JJQ97_RS05840 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS05845 PF18024 Helix-turn-helix domain JJQ97_RS05845 PF00158 Sigma-54 interaction domain JJQ97_RS05855 PF04304 Protein of unknown function (DUF454) JJQ97_RS05860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JJQ97_RS05860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JJQ97_RS05865 PF00920 Dehydratase family JJQ97_RS05870 PF02685 Glucokinase JJQ97_RS05875 PF00072 Response regulator receiver domain JJQ97_RS05875 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS05880 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS05880 PF00672 HAMP domain JJQ97_RS05885 PF01547 Bacterial extracellular solute-binding protein JJQ97_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS05895 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS05900 PF08402 TOBE domain JJQ97_RS05900 PF00005 ABC transporter JJQ97_RS05905 PF04966 Carbohydrate-selective porin, OprB family JJQ97_RS05910 PF01263 Aldose 1-epimerase JJQ97_RS05915 PF01380 SIS domain JJQ97_RS05915 PF01418 Helix-turn-helix domain, rpiR family JJQ97_RS05920 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JJQ97_RS05920 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JJQ97_RS05925 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JJQ97_RS05930 PF01081 KDPG and KHG aldolase JJQ97_RS05935 PF12843 Putative quorum-sensing-regulated virulence factor JJQ97_RS05945 PF00563 EAL domain JJQ97_RS05945 PF00360 Phytochrome region JJQ97_RS05945 PF01590 GAF domain JJQ97_RS05945 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS05950 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS05950 PF00672 HAMP domain JJQ97_RS05950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS05955 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS05955 PF00072 Response regulator receiver domain JJQ97_RS05960 PF00873 AcrB/AcrD/AcrF family JJQ97_RS05965 PF13533 Biotin-lipoyl like JJQ97_RS05980 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JJQ97_RS05980 PF02753 Pili assembly chaperone PapD, C-terminal domain JJQ97_RS05985 PF00577 Outer membrane usher protein JJQ97_RS05985 PF13953 PapC C-terminal domain JJQ97_RS05985 PF13954 PapC N-terminal domain JJQ97_RS05990 PF02753 Pili assembly chaperone PapD, C-terminal domain JJQ97_RS05990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JJQ97_RS06015 PF01584 CheW-like domain JJQ97_RS06015 PF00072 Response regulator receiver domain JJQ97_RS06020 PF02600 Disulfide bond formation protein DsbB JJQ97_RS06030 PF06481 COX Aromatic Rich Motif JJQ97_RS06030 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JJQ97_RS06035 PF00115 Cytochrome C and Quinol oxidase polypeptide I JJQ97_RS06040 PF00510 Cytochrome c oxidase subunit III JJQ97_RS06045 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JJQ97_RS06050 PF01040 UbiA prenyltransferase family JJQ97_RS06055 PF00535 Glycosyl transferase family 2 JJQ97_RS06060 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ97_RS06065 PF01063 Amino-transferase class IV JJQ97_RS06075 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS06085 PF16197 Ketoacyl-synthetase C-terminal extension JJQ97_RS06085 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ97_RS06085 PF00698 Acyl transferase domain JJQ97_RS06085 PF00550 Phosphopantetheine attachment site JJQ97_RS06085 PF14765 Polyketide synthase dehydratase JJQ97_RS06085 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ97_RS06085 PF08659 KR domain JJQ97_RS06085 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS06085 PF00107 Zinc-binding dehydrogenase JJQ97_RS06090 PF00080 Copper/zinc superoxide dismutase (SODC) JJQ97_RS06105 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS06110 PF00563 EAL domain JJQ97_RS06110 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS06110 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS06120 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS06120 PF07729 FCD domain JJQ97_RS06130 PF00857 Isochorismatase family JJQ97_RS06135 PF00005 ABC transporter JJQ97_RS06140 PF00857 Isochorismatase family JJQ97_RS06145 PF00795 Carbon-nitrogen hydrolase JJQ97_RS06150 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS06160 PF02608 ABC transporter substrate-binding protein PnrA-like JJQ97_RS06165 PF01425 Amidase JJQ97_RS06175 PF00083 Sugar (and other) transporter JJQ97_RS06180 PF00970 Oxidoreductase FAD-binding domain JJQ97_RS06180 PF00175 Oxidoreductase NAD-binding domain JJQ97_RS06180 PF00042 Globin JJQ97_RS06215 PF01062 Bestrophin, RFP-TM, chloride channel JJQ97_RS06225 PF02547 Queuosine biosynthesis protein JJQ97_RS06230 PF01702 Queuine tRNA-ribosyltransferase JJQ97_RS06235 PF02699 Preprotein translocase subunit JJQ97_RS06240 PF02355 Protein export membrane protein JJQ97_RS06240 PF07549 SecD/SecF GG Motif JJQ97_RS06240 PF13721 SecD export protein N-terminal TM region JJQ97_RS06245 PF02355 Protein export membrane protein JJQ97_RS06245 PF07549 SecD/SecF GG Motif JJQ97_RS06250 PF05433 Glycine zipper 2TM domain JJQ97_RS06260 PF00459 Inositol monophosphatase family JJQ97_RS06265 PF00588 SpoU rRNA Methylase family JJQ97_RS06270 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ97_RS06275 PF02082 Transcriptional regulator JJQ97_RS06280 PF00266 Aminotransferase class-V JJQ97_RS06285 PF01592 NifU-like N terminal domain JJQ97_RS06290 PF01521 Iron-sulphur cluster biosynthesis JJQ97_RS06295 PF07743 HSCB C-terminal oligomerisation domain JJQ97_RS06295 PF00226 DnaJ domain JJQ97_RS06300 PF00012 Hsp70 protein JJQ97_RS06305 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ97_RS06310 PF04384 Iron-sulphur cluster assembly JJQ97_RS06315 PF00334 Nucleoside diphosphate kinase JJQ97_RS06320 PF04055 Radical SAM superfamily JJQ97_RS06335 PF04551 GcpE protein JJQ97_RS06340 PF03129 Anticodon binding domain JJQ97_RS06340 PF13393 Histidyl-tRNA synthetase JJQ97_RS06350 PF13360 PQQ-like domain JJQ97_RS06355 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JJQ97_RS06355 PF01926 50S ribosome-binding GTPase JJQ97_RS06365 PF00155 Aminotransferase class I and II JJQ97_RS06370 PF00795 Carbon-nitrogen hydrolase JJQ97_RS06385 PF00682 HMGL-like JJQ97_RS06385 PF08502 LeuA allosteric (dimerisation) domain JJQ97_RS06390 PF01476 LysM domain JJQ97_RS06390 PF01551 Peptidase family M23 JJQ97_RS06390 PF08525 Opacity-associated protein A N-terminal motif JJQ97_RS06395 PF13742 OB-fold nucleic acid binding domain JJQ97_RS06395 PF02601 Exonuclease VII, large subunit JJQ97_RS06405 PF00571 CBS domain JJQ97_RS06405 PF00478 IMP dehydrogenase / GMP reductase domain JJQ97_RS06410 PF02540 NAD synthase JJQ97_RS06410 PF00958 GMP synthase C terminal domain JJQ97_RS06410 PF00117 Glutamine amidotransferase class-I JJQ97_RS06430 PF02311 AraC-like ligand binding domain JJQ97_RS06430 PF12833 Helix-turn-helix domain JJQ97_RS06440 PF02321 Outer membrane efflux protein JJQ97_RS06445 PF00873 AcrB/AcrD/AcrF family JJQ97_RS06450 PF00529 HlyD membrane-fusion protein of T1SS JJQ97_RS06450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS06455 PF00593 TonB dependent receptor JJQ97_RS06455 PF07660 Secretin and TonB N terminus short domain JJQ97_RS06455 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS06475 PF02311 AraC-like ligand binding domain JJQ97_RS06475 PF12833 Helix-turn-helix domain JJQ97_RS06480 PF07690 Major Facilitator Superfamily JJQ97_RS06485 PF03466 LysR substrate binding domain JJQ97_RS06485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS06490 PF01979 Amidohydrolase family JJQ97_RS06500 PF08450 SMP-30/Gluconolactonase/LRE-like region JJQ97_RS06505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ97_RS06510 PF07690 Major Facilitator Superfamily JJQ97_RS06515 PF00455 DeoR C terminal sensor domain JJQ97_RS06515 PF08220 DeoR-like helix-turn-helix domain JJQ97_RS06545 PF07732 Multicopper oxidase JJQ97_RS06545 PF07731 Multicopper oxidase JJQ97_RS06545 PF00394 Multicopper oxidase JJQ97_RS06550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JJQ97_RS06555 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS06555 PF01464 Transglycosylase SLT domain JJQ97_RS06560 PF02769 AIR synthase related protein, C-terminal domain JJQ97_RS06560 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JJQ97_RS06560 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JJQ97_RS06575 PF00293 NUDIX domain JJQ97_RS06575 PF09297 NADH pyrophosphatase zinc ribbon domain JJQ97_RS06580 PF00293 NUDIX domain JJQ97_RS06585 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ97_RS06600 PF02222 ATP-grasp domain JJQ97_RS06605 PF07690 Major Facilitator Superfamily JJQ97_RS06605 PF00083 Sugar (and other) transporter JJQ97_RS06610 PF03471 Transporter associated domain JJQ97_RS06610 PF00571 CBS domain JJQ97_RS06610 PF01595 Cyclin M transmembrane N-terminal domain JJQ97_RS06620 PF02881 SRP54-type protein, helical bundle domain JJQ97_RS06620 PF02978 Signal peptide binding domain JJQ97_RS06620 PF00448 SRP54-type protein, GTPase domain JJQ97_RS06625 PF00886 Ribosomal protein S16 JJQ97_RS06630 PF05239 PRC-barrel domain JJQ97_RS06630 PF01782 RimM N-terminal domain JJQ97_RS06635 PF01746 tRNA (Guanine-1)-methyltransferase JJQ97_RS06640 PF01245 Ribosomal protein L19 JJQ97_RS06645 PF00589 Phage integrase family JJQ97_RS06645 PF02899 Phage integrase, N-terminal SAM-like domain JJQ97_RS06650 PF13098 Thioredoxin-like domain JJQ97_RS06650 PF10411 Disulfide bond isomerase protein N-terminus JJQ97_RS06655 PF01842 ACT domain JJQ97_RS06655 PF00742 Homoserine dehydrogenase JJQ97_RS06655 PF03447 Homoserine dehydrogenase, NAD binding domain JJQ97_RS06660 PF00291 Pyridoxal-phosphate dependent enzyme JJQ97_RS06660 PF14821 Threonine synthase N terminus JJQ97_RS06665 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS06665 PF01627 Hpt domain JJQ97_RS06665 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS06665 PF00989 PAS fold JJQ97_RS06665 PF00072 Response regulator receiver domain JJQ97_RS06670 PF00360 Phytochrome region JJQ97_RS06670 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS06670 PF01590 GAF domain JJQ97_RS06670 PF00563 EAL domain JJQ97_RS06675 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS06675 PF00072 Response regulator receiver domain JJQ97_RS06690 PF07152 YaeQ protein JJQ97_RS06695 PF01368 DHH family JJQ97_RS06695 PF02272 DHHA1 domain JJQ97_RS06695 PF17768 RecJ OB domain JJQ97_RS06700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ97_RS06710 PF13188 PAS domain JJQ97_RS06710 PF08448 PAS fold JJQ97_RS06710 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS06710 PF00072 Response regulator receiver domain JJQ97_RS06725 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS06725 PF00672 HAMP domain JJQ97_RS06725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS06735 PF01739 CheR methyltransferase, SAM binding domain JJQ97_RS06745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS06745 PF01584 CheW-like domain JJQ97_RS06745 PF01627 Hpt domain JJQ97_RS06745 PF00072 Response regulator receiver domain JJQ97_RS06750 PF01339 CheB methylesterase JJQ97_RS06750 PF00072 Response regulator receiver domain JJQ97_RS06755 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS06755 PF00563 EAL domain JJQ97_RS06755 PF00360 Phytochrome region JJQ97_RS06755 PF01590 GAF domain JJQ97_RS06765 PF01336 OB-fold nucleic acid binding domain JJQ97_RS06765 PF00152 tRNA synthetases class II (D, K and N) JJQ97_RS06780 PF12146 Serine aminopeptidase, S33 JJQ97_RS06790 PF05736 OprF membrane domain JJQ97_RS06790 PF00691 OmpA family JJQ97_RS06800 PF00311 Phosphoenolpyruvate carboxylase JJQ97_RS06805 PF05191 Adenylate kinase, active site lid JJQ97_RS06810 PF00814 Glycoprotease family JJQ97_RS06835 PF04445 Putative SAM-dependent methyltransferase JJQ97_RS06850 PF01553 Acyltransferase JJQ97_RS06860 PF13847 Methyltransferase domain JJQ97_RS06865 PF07687 Peptidase dimerisation domain JJQ97_RS06865 PF01546 Peptidase family M20/M25/M40 JJQ97_RS06875 PF00899 ThiF family JJQ97_RS06880 PF02657 Fe-S metabolism associated domain JJQ97_RS06885 PF00266 Aminotransferase class-V JJQ97_RS06890 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JJQ97_RS06890 PF14602 Hexapeptide repeat of succinyl-transferase JJQ97_RS06895 PF03960 ArsC family JJQ97_RS06910 PF00155 Aminotransferase class I and II JJQ97_RS06915 PF08335 GlnD PII-uridylyltransferase JJQ97_RS06915 PF01966 HD domain JJQ97_RS06915 PF01909 Nucleotidyltransferase domain JJQ97_RS06920 PF00557 Metallopeptidase family M24 JJQ97_RS06925 PF00318 Ribosomal protein S2 JJQ97_RS06930 PF00889 Elongation factor TS JJQ97_RS06935 PF00696 Amino acid kinase family JJQ97_RS06940 PF01765 Ribosome recycling factor JJQ97_RS06945 PF01255 Putative undecaprenyl diphosphate synthase JJQ97_RS06955 PF13288 DXP reductoisomerase C-terminal domain JJQ97_RS06955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JJQ97_RS06955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JJQ97_RS06960 PF02163 Peptidase family M50 JJQ97_RS06960 PF13180 PDZ domain JJQ97_RS06960 PF17820 PDZ domain JJQ97_RS06965 PF01103 Surface antigen JJQ97_RS06965 PF07244 Surface antigen variable number repeat JJQ97_RS06970 PF03938 Outer membrane protein (OmpH-like) JJQ97_RS06975 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JJQ97_RS06975 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ97_RS06980 PF07977 FabA-like domain JJQ97_RS06985 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JJQ97_RS06985 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ97_RS06990 PF02684 Lipid-A-disaccharide synthetase JJQ97_RS06995 PF01351 Ribonuclease HII JJQ97_RS07000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JJQ97_RS07000 PF14579 Helix-hairpin-helix motif JJQ97_RS07000 PF07733 Bacterial DNA polymerase III alpha NTPase domain JJQ97_RS07000 PF02811 PHP domain JJQ97_RS07000 PF01336 OB-fold nucleic acid binding domain JJQ97_RS07005 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JJQ97_RS07010 PF11734 TilS substrate C-terminal domain JJQ97_RS07010 PF09179 TilS substrate binding domain JJQ97_RS07010 PF01171 PP-loop family JJQ97_RS07015 PF00117 Glutamine amidotransferase class-I JJQ97_RS07015 PF06418 CTP synthase N-terminus JJQ97_RS07020 PF00793 DAHP synthetase I family JJQ97_RS07025 PF00113 Enolase, C-terminal TIM barrel domain JJQ97_RS07025 PF03952 Enolase, N-terminal domain JJQ97_RS07030 PF04977 Septum formation initiator JJQ97_RS07035 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JJQ97_RS07040 PF03466 LysR substrate binding domain JJQ97_RS07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS07045 PF00107 Zinc-binding dehydrogenase JJQ97_RS07045 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS07050 PF00756 Putative esterase JJQ97_RS07055 PF02542 YgbB family JJQ97_RS07060 PF01142 tRNA pseudouridine synthase D (TruD) JJQ97_RS07065 PF01975 Survival protein SurE JJQ97_RS07075 PF01551 Peptidase family M23 JJQ97_RS07075 PF01476 LysM domain JJQ97_RS07080 PF04542 Sigma-70 region 2 JJQ97_RS07080 PF04539 Sigma-70 region 3 JJQ97_RS07080 PF04545 Sigma-70, region 4 JJQ97_RS07080 PF00140 Sigma-70 factor, region 1.2 JJQ97_RS07085 PF11953 Domain of unknown function (DUF3470) JJQ97_RS07085 PF00037 4Fe-4S binding domain JJQ97_RS07090 PF00488 MutS domain V JJQ97_RS07090 PF05190 MutS family domain IV JJQ97_RS07090 PF01624 MutS domain I JJQ97_RS07090 PF05188 MutS domain II JJQ97_RS07090 PF05192 MutS domain III JJQ97_RS07095 PF02464 Competence-damaged protein JJQ97_RS07100 PF00154 recA bacterial DNA recombination protein JJQ97_RS07105 PF02631 RecX family JJQ97_RS07120 PF03942 DTW domain JJQ97_RS07130 PF00072 Response regulator receiver domain JJQ97_RS07130 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS07135 PF01219 Prokaryotic diacylglycerol kinase JJQ97_RS07140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS07140 PF03466 LysR substrate binding domain JJQ97_RS07145 PF00175 Oxidoreductase NAD-binding domain JJQ97_RS07145 PF00970 Oxidoreductase FAD-binding domain JJQ97_RS07150 PF01980 tRNA-methyltransferase O JJQ97_RS07150 PF18389 TrmO C-terminal domain JJQ97_RS07155 PF07308 Protein of unknown function (DUF1456) JJQ97_RS07160 PF01479 S4 domain JJQ97_RS07160 PF00849 RNA pseudouridylate synthase JJQ97_RS07165 PF13673 Acetyltransferase (GNAT) domain JJQ97_RS07170 PF00919 Uncharacterized protein family UPF0004 JJQ97_RS07170 PF18693 TRAM domain JJQ97_RS07170 PF04055 Radical SAM superfamily JJQ97_RS07180 PF02705 K+ potassium transporter JJQ97_RS07190 PF09924 Uncharacterised conserved protein (DUF2156) JJQ97_RS07190 PF03706 Lysylphosphatidylglycerol synthase TM region JJQ97_RS07205 PF00817 impB/mucB/samB family JJQ97_RS07205 PF11798 IMS family HHH motif JJQ97_RS07215 PF03129 Anticodon binding domain JJQ97_RS07215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JJQ97_RS07215 PF04073 Aminoacyl-tRNA editing domain JJQ97_RS07220 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS07220 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS07220 PF01609 Transposase DDE domain JJQ97_RS07220 PF01609 Transposase DDE domain JJQ97_RS07225 PF03573 outer membrane porin, OprD family JJQ97_RS07235 PF04102 SlyX JJQ97_RS07240 PF00313 'Cold-shock' DNA-binding domain JJQ97_RS07245 PF00210 Ferritin-like domain JJQ97_RS07255 PF01336 OB-fold nucleic acid binding domain JJQ97_RS07255 PF00152 tRNA synthetases class II (D, K and N) JJQ97_RS07255 PF02938 GAD domain JJQ97_RS07260 PF01709 Transcriptional regulator JJQ97_RS07265 PF02075 Crossover junction endodeoxyribonuclease RuvC JJQ97_RS07270 PF07499 RuvA, C-terminal domain JJQ97_RS07270 PF01330 RuvA N terminal domain JJQ97_RS07275 PF05496 Holliday junction DNA helicase RuvB P-loop domain JJQ97_RS07275 PF05491 RuvB C-terminal winged helix domain JJQ97_RS07275 PF17864 RuvB AAA lid domain JJQ97_RS07280 PF03061 Thioesterase superfamily JJQ97_RS07285 PF01618 MotA/TolQ/ExbB proton channel family JJQ97_RS07290 PF02472 Biopolymer transport protein ExbD/TolR JJQ97_RS07300 PF04052 TolB amino-terminal domain JJQ97_RS07300 PF07676 WD40-like Beta Propeller Repeat JJQ97_RS07305 PF00691 OmpA family JJQ97_RS07310 PF16331 TolA binding protein trimerisation JJQ97_RS07310 PF13525 Outer membrane lipoprotein JJQ97_RS07315 PF04055 Radical SAM superfamily JJQ97_RS07320 PF06508 Queuosine biosynthesis protein QueC JJQ97_RS07335 PF01791 DeoC/LacD family aldolase JJQ97_RS07340 PF00455 DeoR C terminal sensor domain JJQ97_RS07340 PF08220 DeoR-like helix-turn-helix domain JJQ97_RS07350 PF07690 Major Facilitator Superfamily JJQ97_RS07355 PF00294 pfkB family carbohydrate kinase JJQ97_RS07375 PF09335 SNARE associated Golgi protein JJQ97_RS07380 PF02445 Quinolinate synthetase A protein JJQ97_RS07385 PF01435 Peptidase family M48 JJQ97_RS07390 PF01206 Sulfurtransferase TusA JJQ97_RS07395 PF01594 AI-2E family transporter JJQ97_RS07400 PF00578 AhpC/TSA family JJQ97_RS07410 PF00701 Dihydrodipicolinate synthetase family JJQ97_RS07415 PF06804 NlpB/DapX lipoprotein JJQ97_RS07420 PF00753 Metallo-beta-lactamase superfamily JJQ97_RS07425 PF01259 SAICAR synthetase JJQ97_RS07450 PF01381 Helix-turn-helix JJQ97_RS07480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ97_RS07490 PF03466 LysR substrate binding domain JJQ97_RS07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS07495 PF04444 Catechol dioxygenase N terminus JJQ97_RS07495 PF00775 Dioxygenase JJQ97_RS07500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS07500 PF03466 LysR substrate binding domain JJQ97_RS07510 PF00107 Zinc-binding dehydrogenase JJQ97_RS07510 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS07515 PF05199 GMC oxidoreductase JJQ97_RS07515 PF00732 GMC oxidoreductase JJQ97_RS07525 PF00465 Iron-containing alcohol dehydrogenase JJQ97_RS07530 PF07690 Major Facilitator Superfamily JJQ97_RS07550 PF00390 Malic enzyme, N-terminal domain JJQ97_RS07550 PF03949 Malic enzyme, NAD binding domain JJQ97_RS07555 PF00884 Sulfatase JJQ97_RS07555 PF08019 Phosphoethanolamine transferase EptA/EptB JJQ97_RS07560 PF01612 3'-5' exonuclease JJQ97_RS07560 PF00570 HRDC domain JJQ97_RS07565 PF05166 YcgL domain JJQ97_RS07570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ97_RS07575 PF00881 Nitroreductase family JJQ97_RS07580 PF03692 Putative zinc- or iron-chelating domain JJQ97_RS07595 PF05275 Copper resistance protein B precursor (CopB) JJQ97_RS07600 PF00394 Multicopper oxidase JJQ97_RS07600 PF07731 Multicopper oxidase JJQ97_RS07600 PF07732 Multicopper oxidase JJQ97_RS07605 PF01844 HNH endonuclease JJQ97_RS07615 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JJQ97_RS07615 PF00326 Prolyl oligopeptidase family JJQ97_RS07625 PF13230 Glutamine amidotransferases class-II JJQ97_RS07645 PF02861 Clp amino terminal domain, pathogenicity island component JJQ97_RS07645 PF07724 AAA domain (Cdc48 subfamily) JJQ97_RS07645 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS07645 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ97_RS07645 PF17871 AAA lid domain JJQ97_RS07655 PF00291 Pyridoxal-phosphate dependent enzyme JJQ97_RS07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS07665 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS07670 PF07690 Major Facilitator Superfamily JJQ97_RS07675 PF01758 Sodium Bile acid symporter family JJQ97_RS07700 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS07700 PF00158 Sigma-54 interaction domain JJQ97_RS07720 PF01514 Secretory protein of YscJ/FliF family JJQ97_RS07745 PF03958 Bacterial type II/III secretion system short domain JJQ97_RS07745 PF00263 Bacterial type II and III secretion system protein JJQ97_RS07770 PF01312 FlhB HrpN YscU SpaS Family JJQ97_RS07775 PF01311 Bacterial export proteins, family 1 JJQ97_RS07780 PF01313 Bacterial export proteins, family 3 JJQ97_RS07785 PF00813 FliP family JJQ97_RS07790 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JJQ97_RS07805 PF02874 ATP synthase alpha/beta family, beta-barrel domain JJQ97_RS07805 PF18269 T3SS EscN ATPase C-terminal domain JJQ97_RS07805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJQ97_RS07815 PF00771 FHIPEP family JJQ97_RS07825 PF08281 Sigma-70, region 4 JJQ97_RS07825 PF04542 Sigma-70 region 2 JJQ97_RS07845 PF04381 Putative exonuclease, RdgC JJQ97_RS07865 PF02515 CoA-transferase family III JJQ97_RS07870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ97_RS07885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ97_RS07885 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JJQ97_RS07910 PF00595 PDZ domain JJQ97_RS07910 PF03572 Peptidase family S41 JJQ97_RS07910 PF11818 C-terminal domain of tail specific protease (DUF3340) JJQ97_RS07910 PF17804 Tail specific protease N-terminal domain JJQ97_RS07915 PF00550 Phosphopantetheine attachment site JJQ97_RS07915 PF08659 KR domain JJQ97_RS07915 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS07915 PF00698 Acyl transferase domain JJQ97_RS07915 PF14765 Polyketide synthase dehydratase JJQ97_RS07925 PF00005 ABC transporter JJQ97_RS07925 PF08402 TOBE domain JJQ97_RS07950 PF07702 UTRA domain JJQ97_RS07950 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS07955 PF00818 Ice nucleation protein repeat JJQ97_RS07955 PF00818 Ice nucleation protein repeat JJQ97_RS07960 PF02127 Aminopeptidase I zinc metalloprotease (M18) JJQ97_RS07965 PF00849 RNA pseudouridylate synthase JJQ97_RS07970 PF03776 Septum formation topological specificity factor MinE JJQ97_RS07975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JJQ97_RS07980 PF05209 Septum formation inhibitor MinC, N-terminal domain JJQ97_RS07980 PF03775 Septum formation inhibitor MinC, C-terminal domain JJQ97_RS07985 PF03279 Bacterial lipid A biosynthesis acyltransferase JJQ97_RS07995 PF05726 Pirin C-terminal cupin domain JJQ97_RS07995 PF02678 Pirin JJQ97_RS08005 PF09317 Domain of unknown function (DUF1974) JJQ97_RS08005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS08005 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ97_RS08005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS08010 PF00043 Glutathione S-transferase, C-terminal domain JJQ97_RS08010 PF13417 Glutathione S-transferase, N-terminal domain JJQ97_RS08015 PF00005 ABC transporter JJQ97_RS08020 PF01061 ABC-2 type transporter JJQ97_RS08025 PF00753 Metallo-beta-lactamase superfamily JJQ97_RS08025 PF03772 Competence protein JJQ97_RS08030 PF01618 MotA/TolQ/ExbB proton channel family JJQ97_RS08035 PF02472 Biopolymer transport protein ExbD/TolR JJQ97_RS08040 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JJQ97_RS08045 PF03966 Trm112p-like protein JJQ97_RS08050 PF02348 Cytidylyltransferase JJQ97_RS08055 PF01565 FAD binding domain JJQ97_RS08055 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JJQ97_RS08060 PF00575 S1 RNA binding domain JJQ97_RS08060 PF12111 Polyribonucleotide phosphorylase C terminal JJQ97_RS08060 PF10150 Ribonuclease E/G family JJQ97_RS08065 PF00849 RNA pseudouridylate synthase JJQ97_RS08065 PF01479 S4 domain JJQ97_RS08075 PF06965 Na+/H+ antiporter 1 JJQ97_RS08075 PF01343 Peptidase family S49 JJQ97_RS08080 PF02545 Maf-like protein JJQ97_RS08085 PF02620 Large ribosomal RNA subunit accumulation protein YceD JJQ97_RS08090 PF01783 Ribosomal L32p protein family JJQ97_RS08095 PF02504 Fatty acid synthesis protein JJQ97_RS08100 PF00698 Acyl transferase domain JJQ97_RS08110 PF00550 Phosphopantetheine attachment site JJQ97_RS08115 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ97_RS08115 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ97_RS08120 PF01063 Amino-transferase class IV JJQ97_RS08125 PF02618 YceG-like family JJQ97_RS08130 PF02223 Thymidylate kinase JJQ97_RS08135 PF09115 DNA polymerase III, delta subunit, C terminal JJQ97_RS08145 PF01026 TatD related DNase JJQ97_RS08155 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS08170 PF02774 Semialdehyde dehydrogenase, dimerisation domain JJQ97_RS08170 PF01118 Semialdehyde dehydrogenase, NAD binding domain JJQ97_RS08180 PF01416 tRNA pseudouridine synthase JJQ97_RS08185 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JJQ97_RS08190 PF01039 Carboxyl transferase domain JJQ97_RS08190 PF17848 Acetyl-coA carboxylase zinc finger domain JJQ97_RS08195 PF08245 Mur ligase middle domain JJQ97_RS08195 PF02875 Mur ligase family, glutamate ligase domain JJQ97_RS08205 PF02674 Colicin V production protein JJQ97_RS08210 PF00156 Phosphoribosyl transferase domain JJQ97_RS08215 PF01053 Cys/Met metabolism PLP-dependent enzyme JJQ97_RS08250 PF00291 Pyridoxal-phosphate dependent enzyme JJQ97_RS08250 PF00585 C-terminal regulatory domain of Threonine dehydratase JJQ97_RS08265 PF12833 Helix-turn-helix domain JJQ97_RS08265 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ97_RS08275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ97_RS08275 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS08285 PF00083 Sugar (and other) transporter JJQ97_RS08285 PF08946 Osmosensory transporter coiled coil JJQ97_RS08290 PF07690 Major Facilitator Superfamily JJQ97_RS08295 PF02040 Arsenical pump membrane protein JJQ97_RS08305 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS08305 PF05230 MASE2 domain JJQ97_RS08310 PF01513 ATP-NAD kinase JJQ97_RS08315 PF00149 Calcineurin-like phosphoesterase JJQ97_RS08320 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JJQ97_RS08320 PF01694 Rhomboid family JJQ97_RS08325 PF07023 Protein of unknown function (DUF1315) JJQ97_RS08335 PF11940 Domain of unknown function (DUF3458) Ig-like fold JJQ97_RS08335 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JJQ97_RS08335 PF01433 Peptidase family M1 domain JJQ97_RS08350 PF01694 Rhomboid family JJQ97_RS08360 PF03994 Domain of Unknown Function (DUF350) JJQ97_RS08370 PF03738 Glutathionylspermidine synthase preATP-grasp JJQ97_RS08375 PF07044 Protein of unknown function (DUF1329) JJQ97_RS08405 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS08410 PF00920 Dehydratase family JJQ97_RS08415 PF07690 Major Facilitator Superfamily JJQ97_RS08430 PF10282 Lactonase, 7-bladed beta-propeller JJQ97_RS08445 PF00149 Calcineurin-like phosphoesterase JJQ97_RS08445 PF12320 Type 5 capsule protein repressor C-terminal domain JJQ97_RS08455 PF07584 Aerotolerance regulator N-terminal JJQ97_RS08455 PF00092 von Willebrand factor type A domain JJQ97_RS08460 PF00092 von Willebrand factor type A domain JJQ97_RS08460 PF07584 Aerotolerance regulator N-terminal JJQ97_RS08470 PF01882 Protein of unknown function DUF58 JJQ97_RS08475 PF17863 AAA lid domain JJQ97_RS08475 PF07726 ATPase family associated with various cellular activities (AAA) JJQ97_RS08490 PF05088 Bacterial NAD-glutamate dehydrogenase JJQ97_RS08495 PF02659 Putative manganese efflux pump JJQ97_RS08500 PF00330 Aconitase family (aconitate hydratase) JJQ97_RS08500 PF06434 Aconitate hydratase 2 N-terminus JJQ97_RS08500 PF11791 Aconitate B N-terminal domain JJQ97_RS08510 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JJQ97_RS08515 PF01047 MarR family JJQ97_RS08520 PF00529 HlyD membrane-fusion protein of T1SS JJQ97_RS08520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS08525 PF07690 Major Facilitator Superfamily JJQ97_RS08530 PF00149 Calcineurin-like phosphoesterase JJQ97_RS08535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JJQ97_RS08540 PF00749 tRNA synthetases class I (E and Q), catalytic domain JJQ97_RS08540 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JJQ97_RS08545 PF01406 tRNA synthetases class I (C) catalytic domain JJQ97_RS08545 PF09190 DALR domain JJQ97_RS08550 PF00158 Sigma-54 interaction domain JJQ97_RS08550 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS08550 PF01590 GAF domain JJQ97_RS08555 PF17912 MalK OB fold domain JJQ97_RS08555 PF00005 ABC transporter JJQ97_RS08560 PF08402 TOBE domain JJQ97_RS08560 PF00005 ABC transporter JJQ97_RS08565 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS08570 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS08585 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JJQ97_RS08585 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JJQ97_RS08605 PF05698 Bacterial trigger factor protein (TF) C-terminus JJQ97_RS08605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ97_RS08605 PF05697 Bacterial trigger factor protein (TF) JJQ97_RS08610 PF00574 Clp protease JJQ97_RS08615 PF07724 AAA domain (Cdc48 subfamily) JJQ97_RS08615 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ97_RS08615 PF06689 ClpX C4-type zinc finger JJQ97_RS08620 PF02190 ATP-dependent protease La (LON) substrate-binding domain JJQ97_RS08620 PF05362 Lon protease (S16) C-terminal proteolytic domain JJQ97_RS08620 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS08625 PF00216 Bacterial DNA-binding protein JJQ97_RS08630 PF13145 PPIC-type PPIASE domain JJQ97_RS08635 PF01638 HxlR-like helix-turn-helix JJQ97_RS08645 PF01609 Transposase DDE domain JJQ97_RS08645 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS08645 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS08645 PF01609 Transposase DDE domain JJQ97_RS08655 PF00005 ABC transporter JJQ97_RS08655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS08660 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS08660 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ97_RS08665 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS08670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS08675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS08680 PF01476 LysM domain JJQ97_RS08680 PF01464 Transglycosylase SLT domain JJQ97_RS08685 PF16123 Hydroxyacylglutathione hydrolase C-terminus JJQ97_RS08685 PF00753 Metallo-beta-lactamase superfamily JJQ97_RS08695 PF00075 RNase H JJQ97_RS08700 PF00929 Exonuclease JJQ97_RS08715 PF03358 NADPH-dependent FMN reductase JJQ97_RS08725 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ97_RS08725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS08725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS08730 PF00378 Enoyl-CoA hydratase/isomerase JJQ97_RS08740 PF13533 Biotin-lipoyl like JJQ97_RS08745 PF01384 Phosphate transporter family JJQ97_RS08755 PF00248 Aldo/keto reductase family JJQ97_RS08760 PF17200 Single Cache domain 2 JJQ97_RS08760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS08760 PF00672 HAMP domain JJQ97_RS08765 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS08765 PF08362 YcdC-like protein, C-terminal region JJQ97_RS08770 PF00072 Response regulator receiver domain JJQ97_RS08770 PF13188 PAS domain JJQ97_RS08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS08770 PF08448 PAS fold JJQ97_RS08770 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS08780 PF14310 Fibronectin type III-like domain JJQ97_RS08780 PF00933 Glycosyl hydrolase family 3 N terminal domain JJQ97_RS08780 PF01915 Glycosyl hydrolase family 3 C-terminal domain JJQ97_RS08795 PF00593 TonB dependent receptor JJQ97_RS08795 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS08800 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JJQ97_RS08815 PF07995 Glucose / Sorbosone dehydrogenase JJQ97_RS08820 PF07690 Major Facilitator Superfamily JJQ97_RS08825 PF00672 HAMP domain JJQ97_RS08825 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS08825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS08830 PF00248 Aldo/keto reductase family JJQ97_RS08845 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS08845 PF00550 Phosphopantetheine attachment site JJQ97_RS08845 PF00975 Thioesterase domain JJQ97_RS08845 PF00668 Condensation domain JJQ97_RS08845 PF00501 AMP-binding enzyme JJQ97_RS08850 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS08850 PF00668 Condensation domain JJQ97_RS08850 PF00550 Phosphopantetheine attachment site JJQ97_RS08850 PF00501 AMP-binding enzyme JJQ97_RS08855 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS08855 PF00501 AMP-binding enzyme JJQ97_RS08855 PF00668 Condensation domain JJQ97_RS08855 PF00975 Thioesterase domain JJQ97_RS08855 PF00550 Phosphopantetheine attachment site JJQ97_RS08860 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JJQ97_RS08875 PF16591 Helical bimodular sensor domain JJQ97_RS08875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS08875 PF00672 HAMP domain JJQ97_RS08885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS08885 PF03466 LysR substrate binding domain JJQ97_RS08890 PF00291 Pyridoxal-phosphate dependent enzyme JJQ97_RS08895 PF01037 Lrp/AsnC ligand binding domain JJQ97_RS08900 PF05661 Protein of unknown function (DUF808) JJQ97_RS08915 PF04115 Ureidoglycolate lyase JJQ97_RS08920 PF03561 Allantoicase repeat JJQ97_RS08925 PF01014 Uricase JJQ97_RS08925 PF09349 OHCU decarboxylase JJQ97_RS08930 PF01522 Polysaccharide deacetylase JJQ97_RS08935 PF00576 HIUase/Transthyretin family JJQ97_RS08945 PF01979 Amidohydrolase family JJQ97_RS08955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JJQ97_RS08955 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JJQ97_RS08960 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ97_RS08960 PF01799 [2Fe-2S] binding domain JJQ97_RS08970 PF02463 RecF/RecN/SMC N terminal domain JJQ97_RS08975 PF04354 ZipA, C-terminal FtsZ-binding domain JJQ97_RS08980 PF03120 NAD-dependent DNA ligase OB-fold domain JJQ97_RS08980 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JJQ97_RS08980 PF01653 NAD-dependent DNA ligase adenylation domain JJQ97_RS08980 PF12826 Helix-hairpin-helix motif JJQ97_RS08980 PF00533 BRCA1 C Terminus (BRCT) domain JJQ97_RS08985 PF10005 zinc-ribbon domain JJQ97_RS08985 PF15887 Putative zinc-binding metallo-peptidase JJQ97_RS08990 PF00583 Acetyltransferase (GNAT) family JJQ97_RS09010 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JJQ97_RS09035 PF00924 Mechanosensitive ion channel JJQ97_RS09040 PF04185 Phosphoesterase family JJQ97_RS09050 PF12169 DNA polymerase III subunits gamma and tau domain III JJQ97_RS09050 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JJQ97_RS09050 PF12170 DNA polymerase III tau subunit V interacting with alpha JJQ97_RS09055 PF02575 YbaB/EbfC DNA-binding family JJQ97_RS09060 PF01206 Sulfurtransferase TusA JJQ97_RS09065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ97_RS09065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ97_RS09065 PF11890 Domain of unknown function (DUF3410) JJQ97_RS09075 PF00005 ABC transporter JJQ97_RS09075 PF00664 ABC transporter transmembrane region JJQ97_RS09080 PF06865 Pyrimidine/purine nucleoside phosphorylase JJQ97_RS09105 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JJQ97_RS09110 PF00107 Zinc-binding dehydrogenase JJQ97_RS09110 PF16884 N-terminal domain of oxidoreductase JJQ97_RS09115 PF02016 LD-carboxypeptidase N-terminal domain JJQ97_RS09115 PF17676 LD-carboxypeptidase C-terminal domain JJQ97_RS09120 PF03594 Benzoate membrane transport protein JJQ97_RS09130 PF00155 Aminotransferase class I and II JJQ97_RS09135 PF02798 Glutathione S-transferase, N-terminal domain JJQ97_RS09150 PF01227 GTP cyclohydrolase I JJQ97_RS09155 PF01713 Smr domain JJQ97_RS09170 PF05175 Methyltransferase small domain JJQ97_RS09185 PF01264 Chorismate synthase JJQ97_RS09190 PF12832 MFS_1 like family JJQ97_RS09195 PF00596 Class II Aldolase and Adducin N-terminal domain JJQ97_RS09200 PF03079 ARD/ARD' family JJQ97_RS09210 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS09210 PF03472 Autoinducer binding domain JJQ97_RS09220 PF00023 Ankyrin repeat JJQ97_RS09220 PF12796 Ankyrin repeats (3 copies) JJQ97_RS09230 PF02535 ZIP Zinc transporter JJQ97_RS09240 PF17284 Spermidine synthase tetramerisation domain JJQ97_RS09245 PF00884 Sulfatase JJQ97_RS09260 PF14403 Circularly permuted ATP-grasp type 2 JJQ97_RS09265 PF14403 Circularly permuted ATP-grasp type 2 JJQ97_RS09265 PF04168 A predicted alpha-helical domain with a conserved ER motif. JJQ97_RS09270 PF08379 Bacterial transglutaminase-like N-terminal region JJQ97_RS09270 PF01841 Transglutaminase-like superfamily JJQ97_RS09280 PF02540 NAD synthase JJQ97_RS09280 PF00958 GMP synthase C terminal domain JJQ97_RS09280 PF00117 Glutamine amidotransferase class-I JJQ97_RS09285 PF01544 CorA-like Mg2+ transporter protein JJQ97_RS09315 PF00034 Cytochrome c JJQ97_RS09345 PF03466 LysR substrate binding domain JJQ97_RS09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS09360 PF13356 Arm DNA-binding domain JJQ97_RS09360 PF00589 Phage integrase family JJQ97_RS09430 PF00857 Isochorismatase family JJQ97_RS09435 PF00176 SNF2 family N-terminal domain JJQ97_RS09435 PF00271 Helicase conserved C-terminal domain JJQ97_RS09435 PF12419 SNF2 Helicase protein JJQ97_RS09445 PF00271 Helicase conserved C-terminal domain JJQ97_RS09445 PF17757 UvrB interaction domain JJQ97_RS09445 PF03461 TRCF domain JJQ97_RS09445 PF02559 CarD-like/TRCF domain JJQ97_RS09445 PF00270 DEAD/DEAH box helicase JJQ97_RS09450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JJQ97_RS09450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JJQ97_RS09460 PF07690 Major Facilitator Superfamily JJQ97_RS09465 PF02424 ApbE family JJQ97_RS09470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJQ97_RS09470 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS09475 PF03009 Glycerophosphoryl diester phosphodiesterase family JJQ97_RS09485 PF12704 MacB-like periplasmic core domain JJQ97_RS09485 PF02687 FtsX-like permease family JJQ97_RS09490 PF00005 ABC transporter JJQ97_RS09495 PF12704 MacB-like periplasmic core domain JJQ97_RS09495 PF02687 FtsX-like permease family JJQ97_RS09500 PF14489 QueF-like protein JJQ97_RS09500 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JJQ97_RS09515 PF04333 MlaA lipoprotein JJQ97_RS09525 PF00072 Response regulator receiver domain JJQ97_RS09525 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS09535 PF00923 Transaldolase/Fructose-6-phosphate aldolase JJQ97_RS09540 PF07687 Peptidase dimerisation domain JJQ97_RS09540 PF01546 Peptidase family M20/M25/M40 JJQ97_RS09545 PF00717 Peptidase S24-like JJQ97_RS09580 PF05977 Transmembrane secretion effector JJQ97_RS09590 PF00202 Aminotransferase class-III JJQ97_RS09605 PF03466 LysR substrate binding domain JJQ97_RS09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS09610 PF01207 Dihydrouridine synthase (Dus) JJQ97_RS09615 PF00582 Universal stress protein family JJQ97_RS09620 PF00072 Response regulator receiver domain JJQ97_RS09625 PF13188 PAS domain JJQ97_RS09625 PF00989 PAS fold JJQ97_RS09625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS09625 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS09625 PF13426 PAS domain JJQ97_RS09630 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS09630 PF00072 Response regulator receiver domain JJQ97_RS09635 PF07730 Histidine kinase JJQ97_RS09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS09635 PF05384 Sensor protein DegS JJQ97_RS09650 PF00975 Thioesterase domain JJQ97_RS09655 PF00550 Phosphopantetheine attachment site JJQ97_RS09655 PF00668 Condensation domain JJQ97_RS09655 PF00501 AMP-binding enzyme JJQ97_RS09655 PF00550 Phosphopantetheine attachment site JJQ97_RS09655 PF00501 AMP-binding enzyme JJQ97_RS09655 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS09655 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS09655 PF00668 Condensation domain JJQ97_RS09660 PF00202 Aminotransferase class-III JJQ97_RS09665 PF03621 MbtH-like protein JJQ97_RS09675 PF00950 ABC 3 transport family JJQ97_RS09680 PF00005 ABC transporter JJQ97_RS09710 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JJQ97_RS09715 PF00668 Condensation domain JJQ97_RS09715 PF00501 AMP-binding enzyme JJQ97_RS09715 PF00550 Phosphopantetheine attachment site JJQ97_RS09715 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS09720 PF00668 Condensation domain JJQ97_RS09720 PF00501 AMP-binding enzyme JJQ97_RS09720 PF00550 Phosphopantetheine attachment site JJQ97_RS09720 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS09725 PF00550 Phosphopantetheine attachment site JJQ97_RS09725 PF00668 Condensation domain JJQ97_RS09725 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS09725 PF00975 Thioesterase domain JJQ97_RS09725 PF00501 AMP-binding enzyme JJQ97_RS09730 PF00668 Condensation domain JJQ97_RS09730 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS09730 PF00501 AMP-binding enzyme JJQ97_RS09730 PF00550 Phosphopantetheine attachment site JJQ97_RS09735 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS09735 PF07660 Secretin and TonB N terminus short domain JJQ97_RS09735 PF00593 TonB dependent receptor JJQ97_RS09740 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS09740 PF00593 TonB dependent receptor JJQ97_RS09740 PF07660 Secretin and TonB N terminus short domain JJQ97_RS09745 PF00005 ABC transporter JJQ97_RS09745 PF00664 ABC transporter transmembrane region JJQ97_RS09770 PF02321 Outer membrane efflux protein JJQ97_RS09775 PF12704 MacB-like periplasmic core domain JJQ97_RS09775 PF02687 FtsX-like permease family JJQ97_RS09775 PF00005 ABC transporter JJQ97_RS09780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS09785 PF01804 Penicillin amidase JJQ97_RS09795 PF00155 Aminotransferase class I and II JJQ97_RS09800 PF02151 UvrB/uvrC motif JJQ97_RS09800 PF04851 Type III restriction enzyme, res subunit JJQ97_RS09800 PF12344 Ultra-violet resistance protein B JJQ97_RS09800 PF00271 Helicase conserved C-terminal domain JJQ97_RS09800 PF17757 UvrB interaction domain JJQ97_RS09805 PF00749 tRNA synthetases class I (E and Q), catalytic domain JJQ97_RS09835 PF01207 Dihydrouridine synthase (Dus) JJQ97_RS09840 PF00011 Hsp20/alpha crystallin family JJQ97_RS09845 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS09845 PF00563 EAL domain JJQ97_RS09845 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS09850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS09855 PF00330 Aconitase family (aconitate hydratase) JJQ97_RS09860 PF00694 Aconitase C-terminal domain JJQ97_RS09865 PF00180 Isocitrate/isopropylmalate dehydrogenase JJQ97_RS09870 PF01118 Semialdehyde dehydrogenase, NAD binding domain JJQ97_RS09870 PF02774 Semialdehyde dehydrogenase, dimerisation domain JJQ97_RS09875 PF05035 2-keto-3-deoxy-galactonokinase JJQ97_RS09880 PF01081 KDPG and KHG aldolase JJQ97_RS09885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JJQ97_RS09885 PF13378 Enolase C-terminal domain-like JJQ97_RS09890 PF07690 Major Facilitator Superfamily JJQ97_RS09895 PF09339 IclR helix-turn-helix domain JJQ97_RS09895 PF01614 Bacterial transcriptional regulator JJQ97_RS09900 PF00107 Zinc-binding dehydrogenase JJQ97_RS09900 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS09905 PF06719 AraC-type transcriptional regulator N-terminus JJQ97_RS09905 PF12833 Helix-turn-helix domain JJQ97_RS09920 PF01012 Electron transfer flavoprotein domain JJQ97_RS09925 PF00766 Electron transfer flavoprotein FAD-binding domain JJQ97_RS09925 PF01012 Electron transfer flavoprotein domain JJQ97_RS09945 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS09945 PF00155 Aminotransferase class I and II JJQ97_RS09955 PF03692 Putative zinc- or iron-chelating domain JJQ97_RS09960 PF01852 START domain JJQ97_RS09965 PF00285 Citrate synthase, C-terminal domain JJQ97_RS09970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JJQ97_RS09975 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JJQ97_RS09980 PF00890 FAD binding domain JJQ97_RS09980 PF02910 Fumarate reductase flavoprotein C-term JJQ97_RS09985 PF13085 2Fe-2S iron-sulfur cluster binding domain JJQ97_RS09990 PF16078 2-oxoglutarate dehydrogenase N-terminus JJQ97_RS09990 PF00676 Dehydrogenase E1 component JJQ97_RS09990 PF16870 2-oxoglutarate dehydrogenase C-terminal JJQ97_RS09990 PF02779 Transketolase, pyrimidine binding domain JJQ97_RS09995 PF02817 e3 binding domain JJQ97_RS09995 PF00364 Biotin-requiring enzyme JJQ97_RS09995 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JJQ97_RS10000 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS10000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJQ97_RS10005 PF08442 ATP-grasp domain JJQ97_RS10005 PF00549 CoA-ligase JJQ97_RS10010 PF00549 CoA-ligase JJQ97_RS10010 PF02629 CoA binding domain JJQ97_RS10025 PF05525 Branched-chain amino acid transport protein JJQ97_RS10030 PF01609 Transposase DDE domain JJQ97_RS10030 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS10030 PF01609 Transposase DDE domain JJQ97_RS10030 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS10035 PF03971 Monomeric isocitrate dehydrogenase JJQ97_RS10040 PF00313 'Cold-shock' DNA-binding domain JJQ97_RS10045 PF02617 ATP-dependent Clp protease adaptor protein ClpS JJQ97_RS10050 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ97_RS10050 PF17871 AAA lid domain JJQ97_RS10050 PF02861 Clp amino terminal domain, pathogenicity island component JJQ97_RS10050 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS10050 PF07724 AAA domain (Cdc48 subfamily) JJQ97_RS10055 PF01176 Translation initiation factor 1A / IF-1 JJQ97_RS10060 PF04376 Arginine-tRNA-protein transferase, N terminus JJQ97_RS10060 PF04377 Arginine-tRNA-protein transferase, C terminus JJQ97_RS10065 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JJQ97_RS10070 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JJQ97_RS10070 PF09397 Ftsk gamma domain JJQ97_RS10070 PF01580 FtsK/SpoIIIE family JJQ97_RS10070 PF17854 FtsK alpha domain JJQ97_RS10075 PF03548 Outer membrane lipoprotein carrier protein LolA JJQ97_RS10080 PF16193 AAA C-terminal domain JJQ97_RS10080 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS10080 PF12002 MgsA AAA+ ATPase C terminal JJQ97_RS10085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JJQ97_RS10090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JJQ97_RS10090 PF02403 Seryl-tRNA synthetase N-terminal domain JJQ97_RS10095 PF10414 Sirohaem synthase dimerisation region JJQ97_RS10095 PF14824 Sirohaem biosynthesis protein central JJQ97_RS10095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ97_RS10100 PF13409 Glutathione S-transferase, N-terminal domain JJQ97_RS10105 PF00591 Glycosyl transferase family, a/b domain JJQ97_RS10105 PF02885 Glycosyl transferase family, helical bundle domain JJQ97_RS10110 PF04358 DsrC like protein JJQ97_RS10120 PF02635 DsrE/DsrF-like family JJQ97_RS10125 PF02635 DsrE/DsrF-like family JJQ97_RS10130 PF07690 Major Facilitator Superfamily JJQ97_RS10140 PF03466 LysR substrate binding domain JJQ97_RS10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS10150 PF01027 Inhibitor of apoptosis-promoting Bax1 JJQ97_RS10155 PF08548 Peptidase M10 serralysin C terminal JJQ97_RS10155 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JJQ97_RS10160 PF02974 Protease inhibitor Inh JJQ97_RS10165 PF00005 ABC transporter JJQ97_RS10165 PF00664 ABC transporter transmembrane region JJQ97_RS10170 PF00529 HlyD membrane-fusion protein of T1SS JJQ97_RS10175 PF02321 Outer membrane efflux protein JJQ97_RS10180 PF01266 FAD dependent oxidoreductase JJQ97_RS10185 PF00171 Aldehyde dehydrogenase family JJQ97_RS10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS10190 PF03466 LysR substrate binding domain JJQ97_RS10200 PF17938 Tetracyclin repressor-like, C-terminal domain JJQ97_RS10200 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS10205 PF14310 Fibronectin type III-like domain JJQ97_RS10205 PF00933 Glycosyl hydrolase family 3 N terminal domain JJQ97_RS10205 PF01915 Glycosyl hydrolase family 3 C-terminal domain JJQ97_RS10215 PF00437 Type II/IV secretion system protein JJQ97_RS10215 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JJQ97_RS10220 PF00482 Type II secretion system (T2SS), protein F JJQ97_RS10225 PF08334 Type II secretion system (T2SS), protein G JJQ97_RS10230 PF07963 Prokaryotic N-terminal methylation motif JJQ97_RS10230 PF12019 Type II transport protein GspH JJQ97_RS10245 PF03934 Type II secretion system (T2SS), protein K JJQ97_RS10265 PF03958 Bacterial type II/III secretion system short domain JJQ97_RS10265 PF00263 Bacterial type II and III secretion system protein JJQ97_RS10280 PF07690 Major Facilitator Superfamily JJQ97_RS10285 PF07702 UTRA domain JJQ97_RS10285 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS10290 PF07690 Major Facilitator Superfamily JJQ97_RS10300 PF00873 AcrB/AcrD/AcrF family JJQ97_RS10310 PF13533 Biotin-lipoyl like JJQ97_RS10315 PF00561 alpha/beta hydrolase fold JJQ97_RS10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS10320 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS10325 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS10325 PF00072 Response regulator receiver domain JJQ97_RS10330 PF01226 Formate/nitrite transporter JJQ97_RS10340 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS10340 PF00593 TonB dependent receptor JJQ97_RS10350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ97_RS10350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ97_RS10350 PF01842 ACT domain JJQ97_RS10360 PF13378 Enolase C-terminal domain-like JJQ97_RS10360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JJQ97_RS10365 PF07690 Major Facilitator Superfamily JJQ97_RS10370 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS10370 PF07729 FCD domain JJQ97_RS10380 PF13556 PucR C-terminal helix-turn-helix domain JJQ97_RS10380 PF17853 GGDEF-like domain JJQ97_RS10380 PF05651 Putative sugar diacid recognition JJQ97_RS10385 PF02595 Glycerate kinase family JJQ97_RS10390 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS10390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS10390 PF00672 HAMP domain JJQ97_RS10400 PF05145 Transition state regulatory protein AbrB JJQ97_RS10405 PF03466 LysR substrate binding domain JJQ97_RS10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS10415 PF08774 VRR-NUC domain JJQ97_RS10415 PF18081 Fanconi anemia-associated nuclease SAP domain JJQ97_RS10430 PF12849 PBP superfamily domain JJQ97_RS10435 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS10440 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS10445 PF00005 ABC transporter JJQ97_RS10450 PF03466 LysR substrate binding domain JJQ97_RS10450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS10455 PF00561 alpha/beta hydrolase fold JJQ97_RS10460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JJQ97_RS10460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JJQ97_RS10460 PF04324 BFD-like [2Fe-2S] binding domain JJQ97_RS10460 PF18267 Rubredoxin NAD+ reductase C-terminal domain JJQ97_RS10460 PF13806 Rieske-like [2Fe-2S] domain JJQ97_RS10460 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS10465 PF18267 Rubredoxin NAD+ reductase C-terminal domain JJQ97_RS10465 PF13806 Rieske-like [2Fe-2S] domain JJQ97_RS10465 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS10465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JJQ97_RS10465 PF04324 BFD-like [2Fe-2S] binding domain JJQ97_RS10465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JJQ97_RS10475 PF12392 Collagenase JJQ97_RS10475 PF01136 Peptidase family U32 JJQ97_RS10480 PF00005 ABC transporter JJQ97_RS10485 PF01032 FecCD transport family JJQ97_RS10495 PF00300 Histidine phosphatase superfamily (branch 1) JJQ97_RS10505 PF00072 Response regulator receiver domain JJQ97_RS10505 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS10515 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS10515 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS10515 PF00563 EAL domain JJQ97_RS10525 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS10525 PF01609 Transposase DDE domain JJQ97_RS10525 PF01609 Transposase DDE domain JJQ97_RS10525 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS10530 PF00155 Aminotransferase class I and II JJQ97_RS10530 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS10535 PF00916 Sulfate permease family JJQ97_RS10535 PF01740 STAS domain JJQ97_RS10540 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS10540 PF00672 HAMP domain JJQ97_RS10545 PF00072 Response regulator receiver domain JJQ97_RS10545 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS10550 PF02321 Outer membrane efflux protein JJQ97_RS10560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS10565 PF00873 AcrB/AcrD/AcrF family JJQ97_RS10570 PF07687 Peptidase dimerisation domain JJQ97_RS10570 PF01546 Peptidase family M20/M25/M40 JJQ97_RS10575 PF17287 POTRA domain JJQ97_RS10575 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JJQ97_RS10575 PF08479 POTRA domain, ShlB-type JJQ97_RS10585 PF03466 LysR substrate binding domain JJQ97_RS10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS10590 PF00682 HMGL-like JJQ97_RS10590 PF07836 DmpG-like communication domain JJQ97_RS10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS10600 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS10605 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JJQ97_RS10605 PF08548 Peptidase M10 serralysin C terminal JJQ97_RS10605 PF00413 Matrixin JJQ97_RS10610 PF01425 Amidase JJQ97_RS10615 PF00455 DeoR C terminal sensor domain JJQ97_RS10615 PF08220 DeoR-like helix-turn-helix domain JJQ97_RS10620 PF01546 Peptidase family M20/M25/M40 JJQ97_RS10650 PF05726 Pirin C-terminal cupin domain JJQ97_RS10650 PF02678 Pirin JJQ97_RS10655 PF03466 LysR substrate binding domain JJQ97_RS10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS10670 PF02470 MlaD protein JJQ97_RS10675 PF04403 Paraquat-inducible protein A JJQ97_RS10680 PF04403 Paraquat-inducible protein A JJQ97_RS10690 PF01447 Thermolysin metallopeptidase, catalytic domain JJQ97_RS10690 PF02868 Thermolysin metallopeptidase, alpha-helical domain JJQ97_RS10690 PF16485 Protealysin propeptide JJQ97_RS10710 PF01554 MatE JJQ97_RS10720 PF00933 Glycosyl hydrolase family 3 N terminal domain JJQ97_RS10720 PF07691 PA14 domain JJQ97_RS10720 PF14310 Fibronectin type III-like domain JJQ97_RS10720 PF01915 Glycosyl hydrolase family 3 C-terminal domain JJQ97_RS10745 PF02803 Thiolase, C-terminal domain JJQ97_RS10745 PF00108 Thiolase, N-terminal domain JJQ97_RS10750 PF00378 Enoyl-CoA hydratase/isomerase JJQ97_RS10755 PF04717 Type VI secretion system, phage-baseplate injector JJQ97_RS10760 PF01709 Transcriptional regulator JJQ97_RS10765 PF07714 Protein tyrosine kinase JJQ97_RS10780 PF18027 Cytosolic carboxypeptidase N-terminal domain JJQ97_RS10780 PF00246 Zinc carboxypeptidase JJQ97_RS10790 PF01037 Lrp/AsnC ligand binding domain JJQ97_RS10790 PF13404 AsnC-type helix-turn-helix domain JJQ97_RS10800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ97_RS10820 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ97_RS10820 PF07683 Cobalamin synthesis protein cobW C-terminal domain JJQ97_RS10825 PF02514 CobN/Magnesium Chelatase JJQ97_RS10830 PF07728 AAA domain (dynein-related subfamily) JJQ97_RS10830 PF13519 von Willebrand factor type A domain JJQ97_RS10830 PF17863 AAA lid domain JJQ97_RS10845 PF00158 Sigma-54 interaction domain JJQ97_RS10845 PF00072 Response regulator receiver domain JJQ97_RS10845 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS10860 PF02673 Bacitracin resistance protein BacA JJQ97_RS10875 PF12146 Serine aminopeptidase, S33 JJQ97_RS10880 PF03466 LysR substrate binding domain JJQ97_RS10880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS10885 PF02525 Flavodoxin-like fold JJQ97_RS10915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JJQ97_RS10915 PF00128 Alpha amylase, catalytic domain JJQ97_RS10925 PF00128 Alpha amylase, catalytic domain JJQ97_RS10930 PF02446 4-alpha-glucanotransferase JJQ97_RS10935 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JJQ97_RS10935 PF00128 Alpha amylase, catalytic domain JJQ97_RS10935 PF11941 Domain of unknown function (DUF3459) JJQ97_RS10940 PF00534 Glycosyl transferases group 1 JJQ97_RS10940 PF08323 Starch synthase catalytic domain JJQ97_RS10945 PF00583 Acetyltransferase (GNAT) family JJQ97_RS10955 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JJQ97_RS10955 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JJQ97_RS10960 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JJQ97_RS10960 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JJQ97_RS10970 PF00723 Glycosyl hydrolases family 15 JJQ97_RS10975 PF13532 2OG-Fe(II) oxygenase superfamily JJQ97_RS11000 PF00483 Nucleotidyl transferase JJQ97_RS11005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJQ97_RS11005 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS11010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS11010 PF00072 Response regulator receiver domain JJQ97_RS11010 PF13426 PAS domain JJQ97_RS11025 PF00578 AhpC/TSA family JJQ97_RS11025 PF10417 C-terminal domain of 1-Cys peroxiredoxin JJQ97_RS11030 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS11030 PF13192 Thioredoxin domain JJQ97_RS11035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ97_RS11055 PF02321 Outer membrane efflux protein JJQ97_RS11060 PF00873 AcrB/AcrD/AcrF family JJQ97_RS11065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS11070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS11070 PF16591 Helical bimodular sensor domain JJQ97_RS11070 PF00672 HAMP domain JJQ97_RS11075 PF00072 Response regulator receiver domain JJQ97_RS11075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ97_RS11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS11075 PF01627 Hpt domain JJQ97_RS11075 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS11075 PF00672 HAMP domain JJQ97_RS11080 PF00360 Phytochrome region JJQ97_RS11080 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS11080 PF01590 GAF domain JJQ97_RS11080 PF00563 EAL domain JJQ97_RS11085 PF03466 LysR substrate binding domain JJQ97_RS11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS11090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ97_RS11090 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS11095 PF13460 NAD(P)H-binding JJQ97_RS11105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ97_RS11110 PF16925 Tetracyclin repressor-like, C-terminal domain JJQ97_RS11110 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS11120 PF03824 High-affinity nickel-transport protein JJQ97_RS11125 PF09335 SNARE associated Golgi protein JJQ97_RS11135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS11135 PF03466 LysR substrate binding domain JJQ97_RS11140 PF00664 ABC transporter transmembrane region JJQ97_RS11140 PF00005 ABC transporter JJQ97_RS11145 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS11150 PF07690 Major Facilitator Superfamily JJQ97_RS11155 PF00294 pfkB family carbohydrate kinase JJQ97_RS11165 PF03747 ADP-ribosylglycohydrolase JJQ97_RS11170 PF07702 UTRA domain JJQ97_RS11170 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS11190 PF00107 Zinc-binding dehydrogenase JJQ97_RS11190 PF08659 KR domain JJQ97_RS11190 PF14765 Polyketide synthase dehydratase JJQ97_RS11190 PF00550 Phosphopantetheine attachment site JJQ97_RS11190 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ97_RS11190 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ97_RS11190 PF16197 Ketoacyl-synthetase C-terminal extension JJQ97_RS11190 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS11190 PF00698 Acyl transferase domain JJQ97_RS11195 PF18413 Neuraminidase-like domain JJQ97_RS11195 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain JJQ97_RS11205 PF00155 Aminotransferase class I and II JJQ97_RS11205 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS11215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JJQ97_RS11215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JJQ97_RS11215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JJQ97_RS11215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JJQ97_RS11225 PF00437 Type II/IV secretion system protein JJQ97_RS11230 PF00005 ABC transporter JJQ97_RS11230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS11235 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS11235 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ97_RS11240 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS11245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS11250 PF05698 Bacterial trigger factor protein (TF) C-terminus JJQ97_RS11255 PF00793 DAHP synthetase I family JJQ97_RS11270 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS11270 PF00072 Response regulator receiver domain JJQ97_RS11275 PF02151 UvrB/uvrC motif JJQ97_RS11275 PF08459 UvrC Helix-hairpin-helix N-terminal JJQ97_RS11275 PF01541 GIY-YIG catalytic domain JJQ97_RS11280 PF01066 CDP-alcohol phosphatidyltransferase JJQ97_RS11295 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JJQ97_RS11300 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH JJQ97_RS11305 PF00092 von Willebrand factor type A domain JJQ97_RS11355 PF13361 UvrD-like helicase C-terminal domain JJQ97_RS11355 PF12705 PD-(D/E)XK nuclease superfamily JJQ97_RS11355 PF00580 UvrD/REP helicase N-terminal domain JJQ97_RS11405 PF00271 Helicase conserved C-terminal domain JJQ97_RS11405 PF00176 SNF2 family N-terminal domain JJQ97_RS11455 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS11460 PF00005 ABC transporter JJQ97_RS11465 PF13407 Periplasmic binding protein domain JJQ97_RS11475 PF12833 Helix-turn-helix domain JJQ97_RS11480 PF06903 VirK protein JJQ97_RS11485 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS11485 PF00672 HAMP domain JJQ97_RS11485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS11495 PF00005 ABC transporter JJQ97_RS11500 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS11505 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS11515 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ97_RS11515 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS11515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS11525 PF00296 Luciferase-like monooxygenase JJQ97_RS11535 PF07519 Tannase and feruloyl esterase JJQ97_RS11555 PF18416 N-acetylglucosamine binding protein domain 2 JJQ97_RS11555 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JJQ97_RS11560 PF17945 Beta/Gamma crystallin JJQ97_RS11560 PF12561 ToxR activated gene A lipoprotein domain JJQ97_RS11605 PF00005 ABC transporter JJQ97_RS11605 PF03459 TOBE domain JJQ97_RS11610 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS11620 PF03060 Nitronate monooxygenase JJQ97_RS11625 PF16925 Tetracyclin repressor-like, C-terminal domain JJQ97_RS11625 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS11630 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS11630 PF00107 Zinc-binding dehydrogenase JJQ97_RS11640 PF00589 Phage integrase family JJQ97_RS11640 PF02899 Phage integrase, N-terminal SAM-like domain JJQ97_RS11650 PF09334 tRNA synthetases class I (M) JJQ97_RS11655 PF01266 FAD dependent oxidoreductase JJQ97_RS11655 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JJQ97_RS11665 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JJQ97_RS11670 PF00291 Pyridoxal-phosphate dependent enzyme JJQ97_RS11680 PF01810 LysE type translocator JJQ97_RS11685 PF00465 Iron-containing alcohol dehydrogenase JJQ97_RS11690 PF00144 Beta-lactamase JJQ97_RS11695 PF12833 Helix-turn-helix domain JJQ97_RS11695 PF01965 DJ-1/PfpI family JJQ97_RS11720 PF06505 Activator of aromatic catabolism JJQ97_RS11720 PF02830 V4R domain JJQ97_RS11720 PF00158 Sigma-54 interaction domain JJQ97_RS11720 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS11725 PF00171 Aldehyde dehydrogenase family JJQ97_RS11745 PF07690 Major Facilitator Superfamily JJQ97_RS11750 PF03573 outer membrane porin, OprD family JJQ97_RS11760 PF00378 Enoyl-CoA hydratase/isomerase JJQ97_RS11765 PF00171 Aldehyde dehydrogenase family JJQ97_RS11770 PF00550 Phosphopantetheine attachment site JJQ97_RS11770 PF07993 Male sterility protein JJQ97_RS11770 PF00501 AMP-binding enzyme JJQ97_RS11775 PF00108 Thiolase, N-terminal domain JJQ97_RS11775 PF02803 Thiolase, C-terminal domain JJQ97_RS11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS11790 PF03466 LysR substrate binding domain JJQ97_RS11795 PF03746 LamB/YcsF family JJQ97_RS11805 PF02626 Carboxyltransferase domain, subdomain A and B JJQ97_RS11825 PF13378 Enolase C-terminal domain-like JJQ97_RS11825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JJQ97_RS11830 PF07690 Major Facilitator Superfamily JJQ97_RS11840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS11840 PF03466 LysR substrate binding domain JJQ97_RS11850 PF01156 Inosine-uridine preferring nucleoside hydrolase JJQ97_RS11855 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS11855 PF08447 PAS fold JJQ97_RS11855 PF08448 PAS fold JJQ97_RS11855 PF00563 EAL domain JJQ97_RS11865 PF00175 Oxidoreductase NAD-binding domain JJQ97_RS11865 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ97_RS11870 PF00355 Rieske [2Fe-2S] domain JJQ97_RS11875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS11875 PF03466 LysR substrate binding domain JJQ97_RS11885 PF07883 Cupin domain JJQ97_RS11885 PF01381 Helix-turn-helix JJQ97_RS11890 PF00072 Response regulator receiver domain JJQ97_RS11890 PF13426 PAS domain JJQ97_RS11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS11910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JJQ97_RS11910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JJQ97_RS11910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JJQ97_RS11915 PF00893 Small Multidrug Resistance protein JJQ97_RS11920 PF00893 Small Multidrug Resistance protein JJQ97_RS11925 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JJQ97_RS11930 PF01522 Polysaccharide deacetylase JJQ97_RS11935 PF02911 Formyl transferase, C-terminal domain JJQ97_RS11935 PF01370 NAD dependent epimerase/dehydratase family JJQ97_RS11935 PF00551 Formyl transferase JJQ97_RS11940 PF00535 Glycosyl transferase family 2 JJQ97_RS11945 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JJQ97_RS11960 PF00696 Amino acid kinase family JJQ97_RS11965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JJQ97_RS11965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JJQ97_RS11975 PF13520 Amino acid permease JJQ97_RS11980 PF02203 Tar ligand binding domain homologue JJQ97_RS11980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS11980 PF00672 HAMP domain JJQ97_RS11990 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ97_RS11990 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS11995 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS12000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS12005 PF00005 ABC transporter JJQ97_RS12005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS12010 PF00005 ABC transporter JJQ97_RS12010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS12015 PF07702 UTRA domain JJQ97_RS12015 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS12030 PF03600 Citrate transporter JJQ97_RS12035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS12035 PF03466 LysR substrate binding domain JJQ97_RS12040 PF00293 NUDIX domain JJQ97_RS12045 PF02567 Phenazine biosynthesis-like protein JJQ97_RS12230 PF02447 GntP family permease JJQ97_RS12235 PF01037 Lrp/AsnC ligand binding domain JJQ97_RS12240 PF00850 Histone deacetylase domain JJQ97_RS12245 PF02423 Ornithine cyclodeaminase/mu-crystallin family JJQ97_RS12250 PF00324 Amino acid permease JJQ97_RS12255 PF00561 alpha/beta hydrolase fold JJQ97_RS12260 PF01266 FAD dependent oxidoreductase JJQ97_RS12270 PF00202 Aminotransferase class-III JJQ97_RS12285 PF03073 TspO/MBR family JJQ97_RS12300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS12300 PF00672 HAMP domain JJQ97_RS12300 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS12305 PF00873 AcrB/AcrD/AcrF family JJQ97_RS12310 PF00529 HlyD membrane-fusion protein of T1SS JJQ97_RS12310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS12315 PF02321 Outer membrane efflux protein JJQ97_RS12320 PF00202 Aminotransferase class-III JJQ97_RS12325 PF02687 FtsX-like permease family JJQ97_RS12325 PF12704 MacB-like periplasmic core domain JJQ97_RS12325 PF00005 ABC transporter JJQ97_RS12330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS12335 PF00501 AMP-binding enzyme JJQ97_RS12335 PF00975 Thioesterase domain JJQ97_RS12335 PF00550 Phosphopantetheine attachment site JJQ97_RS12335 PF00668 Condensation domain JJQ97_RS12335 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS12340 PF00501 AMP-binding enzyme JJQ97_RS12340 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS12340 PF00668 Condensation domain JJQ97_RS12340 PF07993 Male sterility protein JJQ97_RS12340 PF00550 Phosphopantetheine attachment site JJQ97_RS12345 PF00501 AMP-binding enzyme JJQ97_RS12345 PF00975 Thioesterase domain JJQ97_RS12345 PF00550 Phosphopantetheine attachment site JJQ97_RS12345 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS12345 PF00668 Condensation domain JJQ97_RS12350 PF00005 ABC transporter JJQ97_RS12350 PF00664 ABC transporter transmembrane region JJQ97_RS12360 PF00975 Thioesterase domain JJQ97_RS12360 PF00550 Phosphopantetheine attachment site JJQ97_RS12360 PF00668 Condensation domain JJQ97_RS12360 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS12360 PF00501 AMP-binding enzyme JJQ97_RS12385 PF00501 AMP-binding enzyme JJQ97_RS12385 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS12385 PF00668 Condensation domain JJQ97_RS12385 PF00550 Phosphopantetheine attachment site JJQ97_RS12385 PF00975 Thioesterase domain JJQ97_RS12390 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS12390 PF00668 Condensation domain JJQ97_RS12390 PF00550 Phosphopantetheine attachment site JJQ97_RS12390 PF00501 AMP-binding enzyme JJQ97_RS12390 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS12390 PF00668 Condensation domain JJQ97_RS12390 PF00550 Phosphopantetheine attachment site JJQ97_RS12390 PF00501 AMP-binding enzyme JJQ97_RS12400 PF02321 Outer membrane efflux protein JJQ97_RS12415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS12430 PF00107 Zinc-binding dehydrogenase JJQ97_RS12430 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS12435 PF10518 TAT (twin-arginine translocation) pathway signal sequence JJQ97_RS12435 PF00149 Calcineurin-like phosphoesterase JJQ97_RS12440 PF13087 AAA domain JJQ97_RS12440 PF13195 Protein of unknown function (DUF4011) JJQ97_RS12440 PF13195 Protein of unknown function (DUF4011) JJQ97_RS12440 PF13087 AAA domain JJQ97_RS12440 PF13086 AAA domain JJQ97_RS12440 PF13086 AAA domain JJQ97_RS12450 PF01810 LysE type translocator JJQ97_RS12455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS12455 PF08447 PAS fold JJQ97_RS12455 PF13426 PAS domain JJQ97_RS12460 PF03737 Aldolase/RraA JJQ97_RS12470 PF00005 ABC transporter JJQ97_RS12475 PF01032 FecCD transport family JJQ97_RS12480 PF01032 FecCD transport family JJQ97_RS12485 PF01497 Periplasmic binding protein JJQ97_RS12490 PF06276 Ferric iron reductase FhuF-like transporter JJQ97_RS12490 PF04183 IucA / IucC family JJQ97_RS12495 PF03328 HpcH/HpaI aldolase/citrate lyase family JJQ97_RS12500 PF04183 IucA / IucC family JJQ97_RS12500 PF06276 Ferric iron reductase FhuF-like transporter JJQ97_RS12505 PF07690 Major Facilitator Superfamily JJQ97_RS12510 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JJQ97_RS12510 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JJQ97_RS12515 PF06276 Ferric iron reductase FhuF-like transporter JJQ97_RS12515 PF04183 IucA / IucC family JJQ97_RS12520 PF00202 Aminotransferase class-III JJQ97_RS12525 PF00593 TonB dependent receptor JJQ97_RS12525 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS12530 PF04773 FecR protein JJQ97_RS12530 PF16220 Domain of unknown function (DUF4880) JJQ97_RS12535 PF04542 Sigma-70 region 2 JJQ97_RS12535 PF08281 Sigma-70, region 4 JJQ97_RS12550 PF00202 Aminotransferase class-III JJQ97_RS12555 PF00596 Class II Aldolase and Adducin N-terminal domain JJQ97_RS12560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JJQ97_RS12560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JJQ97_RS12580 PF00171 Aldehyde dehydrogenase family JJQ97_RS12590 PF00975 Thioesterase domain JJQ97_RS12590 PF00550 Phosphopantetheine attachment site JJQ97_RS12590 PF00668 Condensation domain JJQ97_RS12590 PF00501 AMP-binding enzyme JJQ97_RS12590 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS12595 PF00501 AMP-binding enzyme JJQ97_RS12595 PF00668 Condensation domain JJQ97_RS12595 PF00550 Phosphopantetheine attachment site JJQ97_RS12595 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS12610 PF01011 PQQ enzyme repeat JJQ97_RS12615 PF04198 Putative sugar-binding domain JJQ97_RS12620 PF02502 Ribose/Galactose Isomerase JJQ97_RS12625 PF00005 ABC transporter JJQ97_RS12630 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS12635 PF13407 Periplasmic binding protein domain JJQ97_RS12645 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS12645 PF00107 Zinc-binding dehydrogenase JJQ97_RS12650 PF02733 Dak1 domain JJQ97_RS12655 PF02734 DAK2 domain JJQ97_RS12660 PF07729 FCD domain JJQ97_RS12660 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS12695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JJQ97_RS12695 PF00391 PEP-utilising enzyme, mobile domain JJQ97_RS12725 PF00202 Aminotransferase class-III JJQ97_RS12745 PF00893 Small Multidrug Resistance protein JJQ97_RS12750 PF00149 Calcineurin-like phosphoesterase JJQ97_RS12755 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS12755 PF17158 Membrane-associated sensor, integral membrane domain JJQ97_RS12760 PF01738 Dienelactone hydrolase family JJQ97_RS12765 PF13183 4Fe-4S dicluster domain JJQ97_RS12765 PF01565 FAD binding domain JJQ97_RS12765 PF02913 FAD linked oxidases, C-terminal domain JJQ97_RS12770 PF03466 LysR substrate binding domain JJQ97_RS12770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS12775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS12775 PF03466 LysR substrate binding domain JJQ97_RS12780 PF07690 Major Facilitator Superfamily JJQ97_RS12785 PF01979 Amidohydrolase family JJQ97_RS12785 PF13382 Adenine deaminase C-terminal domain JJQ97_RS12795 PF13673 Acetyltransferase (GNAT) domain JJQ97_RS12800 PF18030 RimK PreATP-grasp domain JJQ97_RS12800 PF08443 RimK-like ATP-grasp domain JJQ97_RS12805 PF01544 CorA-like Mg2+ transporter protein JJQ97_RS12815 PF01336 OB-fold nucleic acid binding domain JJQ97_RS12815 PF14579 Helix-hairpin-helix motif JJQ97_RS12815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JJQ97_RS12815 PF07733 Bacterial DNA polymerase III alpha NTPase domain JJQ97_RS12815 PF02811 PHP domain JJQ97_RS12830 PF00717 Peptidase S24-like JJQ97_RS12830 PF01726 LexA DNA binding domain JJQ97_RS12835 PF00248 Aldo/keto reductase family JJQ97_RS12845 PF09084 NMT1/THI5 like JJQ97_RS12850 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS12855 PF00005 ABC transporter JJQ97_RS12860 PF13416 Bacterial extracellular solute-binding protein JJQ97_RS12870 PF00580 UvrD/REP helicase N-terminal domain JJQ97_RS12870 PF12462 DNA helicase IV / RNA helicase N terminal JJQ97_RS12870 PF13361 UvrD-like helicase C-terminal domain JJQ97_RS12875 PF00294 pfkB family carbohydrate kinase JJQ97_RS12895 PF00005 ABC transporter JJQ97_RS12900 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS12905 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS12910 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS12940 PF11254 Protein of unknown function (DUF3053) JJQ97_RS12950 PF12848 ABC transporter JJQ97_RS12950 PF00005 ABC transporter JJQ97_RS12955 PF01609 Transposase DDE domain JJQ97_RS12955 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS12955 PF01609 Transposase DDE domain JJQ97_RS12955 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS12960 PF10282 Lactonase, 7-bladed beta-propeller JJQ97_RS12965 PF07690 Major Facilitator Superfamily JJQ97_RS12970 PF03797 Autotransporter beta-domain JJQ97_RS12975 PF00128 Alpha amylase, catalytic domain JJQ97_RS12975 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JJQ97_RS12975 PF02806 Alpha amylase, C-terminal all-beta domain JJQ97_RS12980 PF16657 Maltogenic Amylase, C-terminal domain JJQ97_RS12980 PF00128 Alpha amylase, catalytic domain JJQ97_RS12985 PF11896 Domain of unknown function (DUF3416) JJQ97_RS12985 PF00128 Alpha amylase, catalytic domain JJQ97_RS13000 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS13000 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS13000 PF00563 EAL domain JJQ97_RS13005 PF02321 Outer membrane efflux protein JJQ97_RS13010 PF00873 AcrB/AcrD/AcrF family JJQ97_RS13015 PF00873 AcrB/AcrD/AcrF family JJQ97_RS13020 PF13533 Biotin-lipoyl like JJQ97_RS13025 PF08534 Redoxin JJQ97_RS13030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS13030 PF03466 LysR substrate binding domain JJQ97_RS13035 PF04357 TamB, inner membrane protein subunit of TAM complex JJQ97_RS13040 PF07244 Surface antigen variable number repeat JJQ97_RS13040 PF17243 POTRA domain TamA domain 1 JJQ97_RS13040 PF01103 Surface antigen JJQ97_RS13050 PF03372 Endonuclease/Exonuclease/phosphatase family JJQ97_RS13055 PF00691 OmpA family JJQ97_RS13060 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ97_RS13060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS13060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS13065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS13065 PF03466 LysR substrate binding domain JJQ97_RS13070 PF13411 MerR HTH family regulatory protein JJQ97_RS13075 PF00682 HMGL-like JJQ97_RS13085 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ97_RS13085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS13085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS13090 PF01039 Carboxyl transferase domain JJQ97_RS13095 PF00378 Enoyl-CoA hydratase/isomerase JJQ97_RS13100 PF00289 Biotin carboxylase, N-terminal domain JJQ97_RS13100 PF00364 Biotin-requiring enzyme JJQ97_RS13100 PF02785 Biotin carboxylase C-terminal domain JJQ97_RS13100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ97_RS13105 PF01521 Iron-sulphur cluster biosynthesis JJQ97_RS13105 PF01106 NifU-like domain JJQ97_RS13110 PF01757 Acyltransferase family JJQ97_RS13120 PF02574 Homocysteine S-methyltransferase JJQ97_RS13120 PF02965 Vitamin B12 dependent methionine synthase, activation domain JJQ97_RS13120 PF00809 Pterin binding enzyme JJQ97_RS13120 PF02310 B12 binding domain JJQ97_RS13120 PF02607 B12 binding domain JJQ97_RS13125 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JJQ97_RS13125 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JJQ97_RS13135 PF08496 Peptidase family S49 N-terminal JJQ97_RS13135 PF01343 Peptidase family S49 JJQ97_RS13160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JJQ97_RS13160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JJQ97_RS13165 PF01925 Sulfite exporter TauE/SafE JJQ97_RS13170 PF09297 NADH pyrophosphatase zinc ribbon domain JJQ97_RS13170 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JJQ97_RS13170 PF00293 NUDIX domain JJQ97_RS13175 PF00378 Enoyl-CoA hydratase/isomerase JJQ97_RS13180 PF06745 KaiC JJQ97_RS13185 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS13185 PF00072 Response regulator receiver domain JJQ97_RS13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS13185 PF08448 PAS fold JJQ97_RS13185 PF13188 PAS domain JJQ97_RS13195 PF09456 RcsC Alpha-Beta-Loop (ABL) JJQ97_RS13195 PF00072 Response regulator receiver domain JJQ97_RS13195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS13195 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS13200 PF01339 CheB methylesterase JJQ97_RS13205 PF01739 CheR methyltransferase, SAM binding domain JJQ97_RS13205 PF03705 CheR methyltransferase, all-alpha domain JJQ97_RS13210 PF00672 HAMP domain JJQ97_RS13210 PF00072 Response regulator receiver domain JJQ97_RS13210 PF01627 Hpt domain JJQ97_RS13210 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ97_RS13210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS13210 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS13215 PF00072 Response regulator receiver domain JJQ97_RS13215 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS13225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ97_RS13230 PF12833 Helix-turn-helix domain JJQ97_RS13235 PF01547 Bacterial extracellular solute-binding protein JJQ97_RS13240 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS13245 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS13250 PF00005 ABC transporter JJQ97_RS13250 PF17912 MalK OB fold domain JJQ97_RS13255 PF01232 Mannitol dehydrogenase Rossmann domain JJQ97_RS13255 PF08125 Mannitol dehydrogenase C-terminal domain JJQ97_RS13260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JJQ97_RS13260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JJQ97_RS13265 PF00294 pfkB family carbohydrate kinase JJQ97_RS13275 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS13275 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS13275 PF00563 EAL domain JJQ97_RS13280 PF00107 Zinc-binding dehydrogenase JJQ97_RS13280 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS13285 PF00293 NUDIX domain JJQ97_RS13285 PF03099 Biotin/lipoate A/B protein ligase family JJQ97_RS13330 PF01266 FAD dependent oxidoreductase JJQ97_RS13345 PF03471 Transporter associated domain JJQ97_RS13345 PF03741 Integral membrane protein TerC family JJQ97_RS13355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS13355 PF03466 LysR substrate binding domain JJQ97_RS13360 PF07690 Major Facilitator Superfamily JJQ97_RS13370 PF04337 Protein of unknown function, DUF480 JJQ97_RS13375 PF08501 Shikimate dehydrogenase substrate binding domain JJQ97_RS13395 PF00768 D-alanyl-D-alanine carboxypeptidase JJQ97_RS13400 PF00171 Aldehyde dehydrogenase family JJQ97_RS13405 PF18807 Tripartite Tc toxins repeat JJQ97_RS13405 PF05785 Rho-activating domain of cytotoxic necrotizing factor JJQ97_RS13415 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS13415 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JJQ97_RS13425 PF12697 Alpha/beta hydrolase family JJQ97_RS13430 PF00171 Aldehyde dehydrogenase family JJQ97_RS13435 PF01613 Flavin reductase like domain JJQ97_RS13440 PF07729 FCD domain JJQ97_RS13440 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS13445 PF00293 NUDIX domain JJQ97_RS13445 PF09297 NADH pyrophosphatase zinc ribbon domain JJQ97_RS13455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JJQ97_RS13455 PF00925 GTP cyclohydrolase II JJQ97_RS13460 PF13416 Bacterial extracellular solute-binding protein JJQ97_RS13465 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS13475 PF08402 TOBE domain JJQ97_RS13475 PF00005 ABC transporter JJQ97_RS13480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS13480 PF03466 LysR substrate binding domain JJQ97_RS13485 PF00180 Isocitrate/isopropylmalate dehydrogenase JJQ97_RS13490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS13490 PF03466 LysR substrate binding domain JJQ97_RS13495 PF00171 Aldehyde dehydrogenase family JJQ97_RS13500 PF01613 Flavin reductase like domain JJQ97_RS13510 PF02625 XdhC and CoxI family JJQ97_RS13510 PF13478 XdhC Rossmann domain JJQ97_RS13515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JJQ97_RS13515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JJQ97_RS13520 PF00941 FAD binding domain in molybdopterin dehydrogenase JJQ97_RS13520 PF03450 CO dehydrogenase flavoprotein C-terminal domain JJQ97_RS13525 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ97_RS13525 PF01799 [2Fe-2S] binding domain JJQ97_RS13525 PF10518 TAT (twin-arginine translocation) pathway signal sequence JJQ97_RS13530 PF06039 Malate:quinone oxidoreductase (Mqo) JJQ97_RS13540 PF08446 PAS fold JJQ97_RS13540 PF01590 GAF domain JJQ97_RS13540 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS13540 PF00360 Phytochrome region JJQ97_RS13540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS13545 PF00072 Response regulator receiver domain JJQ97_RS13580 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS13585 PF00005 ABC transporter JJQ97_RS13590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JJQ97_RS13595 PF08450 SMP-30/Gluconolactonase/LRE-like region JJQ97_RS13600 PF01263 Aldose 1-epimerase JJQ97_RS13605 PF01297 Zinc-uptake complex component A periplasmic JJQ97_RS13610 PF00950 ABC 3 transport family JJQ97_RS13615 PF00005 ABC transporter JJQ97_RS13635 PF02146 Sir2 family JJQ97_RS13640 PF03104 DNA polymerase family B, exonuclease domain JJQ97_RS13640 PF00136 DNA polymerase family B JJQ97_RS13655 PF00202 Aminotransferase class-III JJQ97_RS13660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS13660 PF03466 LysR substrate binding domain JJQ97_RS13665 PF00672 HAMP domain JJQ97_RS13665 PF16591 Helical bimodular sensor domain JJQ97_RS13665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS13680 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JJQ97_RS13685 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) JJQ97_RS13695 PF00583 Acetyltransferase (GNAT) family JJQ97_RS13700 PF03129 Anticodon binding domain JJQ97_RS13700 PF13393 Histidyl-tRNA synthetase JJQ97_RS13710 PF14331 ImcF-related N-terminal domain JJQ97_RS13710 PF06744 Type VI secretion protein IcmF C-terminal JJQ97_RS13710 PF06761 Intracellular multiplication and human macrophage-killing JJQ97_RS13720 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JJQ97_RS13735 PF00158 Sigma-54 interaction domain JJQ97_RS13735 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS13735 PF00072 Response regulator receiver domain JJQ97_RS13740 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ97_RS13740 PF17871 AAA lid domain JJQ97_RS13740 PF07724 AAA domain (Cdc48 subfamily) JJQ97_RS13740 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS13750 PF05947 Type VI secretion system, TssF JJQ97_RS13760 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JJQ97_RS13775 PF05638 Type VI secretion system effector, Hcp JJQ97_RS13780 PF04717 Type VI secretion system, phage-baseplate injector JJQ97_RS13805 PF03741 Integral membrane protein TerC family JJQ97_RS13805 PF03471 Transporter associated domain JJQ97_RS13825 PF06912 Protein of unknown function (DUF1275) JJQ97_RS13830 PF10672 S-adenosylmethionine-dependent methyltransferase JJQ97_RS13830 PF17785 PUA-like domain JJQ97_RS13835 PF01614 Bacterial transcriptional regulator JJQ97_RS13835 PF09339 IclR helix-turn-helix domain JJQ97_RS13840 PF08402 TOBE domain JJQ97_RS13840 PF00005 ABC transporter JJQ97_RS13845 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS13850 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS13860 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS13860 PF04324 BFD-like [2Fe-2S] binding domain JJQ97_RS13870 PF01547 Bacterial extracellular solute-binding protein JJQ97_RS13880 PF04055 Radical SAM superfamily JJQ97_RS13880 PF06463 Molybdenum Cofactor Synthesis C JJQ97_RS13905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS13905 PF00672 HAMP domain JJQ97_RS13910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ97_RS13910 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ97_RS13910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ97_RS13915 PF03717 Penicillin-binding Protein dimerisation domain JJQ97_RS13915 PF00905 Penicillin binding protein transpeptidase domain JJQ97_RS13920 PF01638 HxlR-like helix-turn-helix JJQ97_RS13925 PF05368 NmrA-like family JJQ97_RS13950 PF00083 Sugar (and other) transporter JJQ97_RS13955 PF01566 Natural resistance-associated macrophage protein JJQ97_RS13960 PF00083 Sugar (and other) transporter JJQ97_RS13970 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS13970 PF00158 Sigma-54 interaction domain JJQ97_RS13975 PF01040 UbiA prenyltransferase family JJQ97_RS13980 PF01565 FAD binding domain JJQ97_RS13980 PF04030 D-arabinono-1,4-lactone oxidase JJQ97_RS13985 PF00106 short chain dehydrogenase JJQ97_RS14000 PF00723 Glycosyl hydrolases family 15 JJQ97_RS14010 PF00248 Aldo/keto reductase family JJQ97_RS14015 PF00005 ABC transporter JJQ97_RS14020 PF07759 Protein of unknown function (DUF1615) JJQ97_RS14025 PF04960 Glutaminase JJQ97_RS14035 PF02630 SCO1/SenC JJQ97_RS14045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS14045 PF00529 HlyD membrane-fusion protein of T1SS JJQ97_RS14050 PF00873 AcrB/AcrD/AcrF family JJQ97_RS14055 PF00563 EAL domain JJQ97_RS14055 PF00360 Phytochrome region JJQ97_RS14055 PF01590 GAF domain JJQ97_RS14055 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS14060 PF00296 Luciferase-like monooxygenase JJQ97_RS14075 PF00296 Luciferase-like monooxygenase JJQ97_RS14080 PF01645 Conserved region in glutamate synthase JJQ97_RS14085 PF01493 GXGXG motif JJQ97_RS14095 PF00120 Glutamine synthetase, catalytic domain JJQ97_RS14115 PF02649 Type I GTP cyclohydrolase folE2 JJQ97_RS14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS14120 PF03466 LysR substrate binding domain JJQ97_RS14125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS14130 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS14135 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS14135 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ97_RS14140 PF00005 ABC transporter JJQ97_RS14140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS14145 PF00005 ABC transporter JJQ97_RS14145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS14150 PF07687 Peptidase dimerisation domain JJQ97_RS14150 PF01546 Peptidase family M20/M25/M40 JJQ97_RS14155 PF01546 Peptidase family M20/M25/M40 JJQ97_RS14155 PF07687 Peptidase dimerisation domain JJQ97_RS14160 PF01425 Amidase JJQ97_RS14165 PF12706 Beta-lactamase superfamily domain JJQ97_RS14175 PF07969 Amidohydrolase family JJQ97_RS14180 PF00005 ABC transporter JJQ97_RS14185 PF00005 ABC transporter JJQ97_RS14190 PF06007 Phosphonate metabolism protein PhnJ JJQ97_RS14195 PF05861 Bacterial phosphonate metabolism protein (PhnI) JJQ97_RS14205 PF06754 Phosphonate metabolism protein PhnG JJQ97_RS14210 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS14210 PF07702 UTRA domain JJQ97_RS14215 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS14225 PF00005 ABC transporter JJQ97_RS14230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS14230 PF00672 HAMP domain JJQ97_RS14230 PF02743 Cache domain JJQ97_RS14235 PF01966 HD domain JJQ97_RS14235 PF00013 KH domain JJQ97_RS14235 PF12072 Domain of unknown function (DUF3552) JJQ97_RS14240 PF01131 DNA topoisomerase JJQ97_RS14240 PF01751 Toprim domain JJQ97_RS14245 PF01042 Endoribonuclease L-PSP JJQ97_RS14255 PF08000 Bacterial PH domain JJQ97_RS14260 PF00672 HAMP domain JJQ97_RS14260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS14265 PF08447 PAS fold JJQ97_RS14265 PF13426 PAS domain JJQ97_RS14265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS14295 PF07690 Major Facilitator Superfamily JJQ97_RS14305 PF00593 TonB dependent receptor JJQ97_RS14305 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS14315 PF00551 Formyl transferase JJQ97_RS14320 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JJQ97_RS14320 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JJQ97_RS14325 PF01266 FAD dependent oxidoreductase JJQ97_RS14330 PF04267 Sarcosine oxidase, delta subunit family JJQ97_RS14335 PF17806 Sarcosine oxidase A3 domain JJQ97_RS14335 PF01571 Aminomethyltransferase folate-binding domain JJQ97_RS14335 PF08669 Glycine cleavage T-protein C-terminal barrel domain JJQ97_RS14335 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS14345 PF00672 HAMP domain JJQ97_RS14345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS14345 PF17200 Single Cache domain 2 JJQ97_RS14350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS14350 PF03466 LysR substrate binding domain JJQ97_RS14370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS14370 PF13426 PAS domain JJQ97_RS14370 PF08447 PAS fold JJQ97_RS14380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ97_RS14385 PF01022 Bacterial regulatory protein, arsR family JJQ97_RS14390 PF13426 PAS domain JJQ97_RS14390 PF08447 PAS fold JJQ97_RS14390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS14400 PF08450 SMP-30/Gluconolactonase/LRE-like region JJQ97_RS14405 PF05853 beta-keto acid cleavage enzyme JJQ97_RS14415 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS14415 PF07729 FCD domain JJQ97_RS14420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS14420 PF16591 Helical bimodular sensor domain JJQ97_RS14420 PF00672 HAMP domain JJQ97_RS14445 PF13148 Protein of unknown function (DUF3987) JJQ97_RS14450 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA JJQ97_RS14470 PF04002 RadC-like JAB domain JJQ97_RS14475 PF04286 Protein of unknown function (DUF445) JJQ97_RS14505 PF17758 Proteasomal ATPase OB N-terminal domain JJQ97_RS14505 PF16450 Proteasomal ATPase OB C-terminal domain JJQ97_RS14505 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS14510 PF00271 Helicase conserved C-terminal domain JJQ97_RS14510 PF00176 SNF2 family N-terminal domain JJQ97_RS14525 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS14525 PF01434 Peptidase family M41 JJQ97_RS14525 PF17862 AAA+ lid domain JJQ97_RS14540 PF02146 Sir2 family JJQ97_RS14565 PF12705 PD-(D/E)XK nuclease superfamily JJQ97_RS14565 PF00580 UvrD/REP helicase N-terminal domain JJQ97_RS14565 PF13361 UvrD-like helicase C-terminal domain JJQ97_RS14585 PF02384 N-6 DNA Methylase JJQ97_RS14585 PF12161 HsdM N-terminal domain JJQ97_RS14600 PF01420 Type I restriction modification DNA specificity domain JJQ97_RS14605 PF08463 EcoEI R protein C-terminal JJQ97_RS14605 PF04851 Type III restriction enzyme, res subunit JJQ97_RS14605 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JJQ97_RS14605 PF00271 Helicase conserved C-terminal domain JJQ97_RS14620 PF00216 Bacterial DNA-binding protein JJQ97_RS14625 PF03147 Ferredoxin-fold anticodon binding domain JJQ97_RS14625 PF03483 B3/4 domain JJQ97_RS14625 PF01588 Putative tRNA binding domain JJQ97_RS14625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JJQ97_RS14625 PF03484 tRNA synthetase B5 domain JJQ97_RS14630 PF01409 tRNA synthetases class II core domain (F) JJQ97_RS14630 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JJQ97_RS14635 PF00453 Ribosomal protein L20 JJQ97_RS14640 PF01632 Ribosomal protein L35 JJQ97_RS14645 PF00707 Translation initiation factor IF-3, C-terminal domain JJQ97_RS14645 PF05198 Translation initiation factor IF-3, N-terminal domain JJQ97_RS14650 PF03129 Anticodon binding domain JJQ97_RS14650 PF02824 TGS domain JJQ97_RS14650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JJQ97_RS14650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JJQ97_RS14660 PF00313 'Cold-shock' DNA-binding domain JJQ97_RS14675 PF01156 Inosine-uridine preferring nucleoside hydrolase JJQ97_RS14680 PF05025 RbsD / FucU transport protein family JJQ97_RS14685 PF00294 pfkB family carbohydrate kinase JJQ97_RS14690 PF00356 Bacterial regulatory proteins, lacI family JJQ97_RS14695 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS14700 PF00005 ABC transporter JJQ97_RS14705 PF13407 Periplasmic binding protein domain JJQ97_RS14720 PF04231 Endonuclease I JJQ97_RS14730 PF00557 Metallopeptidase family M24 JJQ97_RS14745 PF02615 Malate/L-lactate dehydrogenase JJQ97_RS14765 PF02254 TrkA-N domain JJQ97_RS14765 PF00999 Sodium/hydrogen exchanger family JJQ97_RS14770 PF00535 Glycosyl transferase family 2 JJQ97_RS14775 PF03454 MoeA C-terminal region (domain IV) JJQ97_RS14775 PF00994 Probable molybdopterin binding domain JJQ97_RS14775 PF03453 MoeA N-terminal region (domain I and II) JJQ97_RS14780 PF00994 Probable molybdopterin binding domain JJQ97_RS14785 PF12804 MobA-like NTP transferase domain JJQ97_RS14795 PF00849 RNA pseudouridylate synthase JJQ97_RS14800 PF08501 Shikimate dehydrogenase substrate binding domain JJQ97_RS14800 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JJQ97_RS14805 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS14805 PF17938 Tetracyclin repressor-like, C-terminal domain JJQ97_RS14810 PF01261 Xylose isomerase-like TIM barrel JJQ97_RS14810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ97_RS14815 PF07690 Major Facilitator Superfamily JJQ97_RS14825 PF03573 outer membrane porin, OprD family JJQ97_RS14830 PF02627 Carboxymuconolactone decarboxylase family JJQ97_RS14835 PF00206 Lyase JJQ97_RS14835 PF10397 Adenylosuccinate lyase C-terminus JJQ97_RS14840 PF07690 Major Facilitator Superfamily JJQ97_RS14845 PF00775 Dioxygenase JJQ97_RS14850 PF00775 Dioxygenase JJQ97_RS14850 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JJQ97_RS14855 PF03466 LysR substrate binding domain JJQ97_RS14855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS14865 PF01757 Acyltransferase family JJQ97_RS14885 PF01966 HD domain JJQ97_RS14895 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS14895 PF00072 Response regulator receiver domain JJQ97_RS14900 PF00072 Response regulator receiver domain JJQ97_RS14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS14900 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS14900 PF01627 Hpt domain JJQ97_RS14900 PF00989 PAS fold JJQ97_RS14900 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS14905 PF04320 Protein with unknown function (DUF469) JJQ97_RS14910 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JJQ97_RS14915 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS14920 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS14920 PF00672 HAMP domain JJQ97_RS14920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS14925 PF10672 S-adenosylmethionine-dependent methyltransferase JJQ97_RS14925 PF02926 THUMP domain JJQ97_RS14925 PF01170 Putative RNA methylase family UPF0020 JJQ97_RS14930 PF04957 Ribosome modulation factor JJQ97_RS14935 PF01180 Dihydroorotate dehydrogenase JJQ97_RS14940 PF00005 ABC transporter JJQ97_RS14945 PF08376 Nitrate and nitrite sensing JJQ97_RS14945 PF03861 ANTAR domain JJQ97_RS14950 PF02435 Levansucrase/Invertase JJQ97_RS14960 PF07690 Major Facilitator Superfamily JJQ97_RS14965 PF03793 PASTA domain JJQ97_RS14965 PF00069 Protein kinase domain JJQ97_RS14970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JJQ97_RS14970 PF04324 BFD-like [2Fe-2S] binding domain JJQ97_RS14970 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS14970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JJQ97_RS14970 PF18267 Rubredoxin NAD+ reductase C-terminal domain JJQ97_RS14975 PF01568 Molydopterin dinucleotide binding domain JJQ97_RS14975 PF00384 Molybdopterin oxidoreductase JJQ97_RS14975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JJQ97_RS14975 PF04324 BFD-like [2Fe-2S] binding domain JJQ97_RS14980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ97_RS14985 PF00691 OmpA family JJQ97_RS14985 PF05736 OprF membrane domain JJQ97_RS14995 PF05552 Conserved TM helix JJQ97_RS15005 PF01544 CorA-like Mg2+ transporter protein JJQ97_RS15010 PF03737 Aldolase/RraA JJQ97_RS15020 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JJQ97_RS15020 PF02896 PEP-utilising enzyme, TIM barrel domain JJQ97_RS15020 PF00391 PEP-utilising enzyme, mobile domain JJQ97_RS15025 PF03618 Kinase/pyrophosphorylase JJQ97_RS15030 PF04303 PrpF protein JJQ97_RS15035 PF00330 Aconitase family (aconitate hydratase) JJQ97_RS15035 PF00694 Aconitase C-terminal domain JJQ97_RS15040 PF00285 Citrate synthase, C-terminal domain JJQ97_RS15050 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS15050 PF07729 FCD domain JJQ97_RS15055 PF08443 RimK-like ATP-grasp domain JJQ97_RS15055 PF18030 RimK PreATP-grasp domain JJQ97_RS15070 PF04715 Anthranilate synthase component I, N terminal region JJQ97_RS15070 PF00425 chorismate binding enzyme JJQ97_RS15080 PF01507 Phosphoadenosine phosphosulfate reductase family JJQ97_RS15085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS15085 PF03466 LysR substrate binding domain JJQ97_RS15100 PF02558 Ketopantoate reductase PanE/ApbA JJQ97_RS15100 PF08546 Ketopantoate reductase PanE/ApbA C terminal JJQ97_RS15105 PF00793 DAHP synthetase I family JJQ97_RS15115 PF11839 Alanine-zipper, major outer membrane lipoprotein JJQ97_RS15120 PF17969 L,D-transpeptidase C-terminal domain JJQ97_RS15120 PF03734 L,D-transpeptidase catalytic domain JJQ97_RS15130 PF13472 GDSL-like Lipase/Acylhydrolase family JJQ97_RS15135 PF00005 ABC transporter JJQ97_RS15145 PF01272 Transcription elongation factor, GreA/GreB, C-term JJQ97_RS15145 PF03449 Transcription elongation factor, N-terminal JJQ97_RS15160 PF07681 DoxX JJQ97_RS15170 PF01026 TatD related DNase JJQ97_RS15175 PF00672 HAMP domain JJQ97_RS15175 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS15175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS15195 PF11992 Domain of unknown function (DUF3488) JJQ97_RS15195 PF13559 Domain of unknown function (DUF4129) JJQ97_RS15195 PF01841 Transglutaminase-like superfamily JJQ97_RS15205 PF07726 ATPase family associated with various cellular activities (AAA) JJQ97_RS15205 PF17863 AAA lid domain JJQ97_RS15215 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS15215 PF00072 Response regulator receiver domain JJQ97_RS15220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS15220 PF02702 Osmosensitive K+ channel His kinase sensor domain JJQ97_RS15220 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS15220 PF13492 GAF domain JJQ97_RS15220 PF13493 Domain of unknown function (DUF4118) JJQ97_RS15225 PF02669 K+-transporting ATPase, c chain JJQ97_RS15235 PF03814 Potassium-transporting ATPase A subunit JJQ97_RS15245 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS15245 PF03472 Autoinducer binding domain JJQ97_RS15280 PF02753 Pili assembly chaperone PapD, C-terminal domain JJQ97_RS15280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JJQ97_RS15285 PF13953 PapC C-terminal domain JJQ97_RS15285 PF00577 Outer membrane usher protein JJQ97_RS15285 PF13954 PapC N-terminal domain JJQ97_RS15300 PF16168 Adhesin of bacterial autotransporter system, probable stalk JJQ97_RS15300 PF03797 Autotransporter beta-domain JJQ97_RS15300 PF03212 Pertactin JJQ97_RS15300 PF13018 Extended Signal Peptide of Type V secretion system JJQ97_RS15310 PF00072 Response regulator receiver domain JJQ97_RS15310 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS15315 PF00672 HAMP domain JJQ97_RS15315 PF16527 Two-component sensor protein CpxA, periplasmic domain JJQ97_RS15315 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS15320 PF01594 AI-2E family transporter JJQ97_RS15330 PF12697 Alpha/beta hydrolase family JJQ97_RS15345 PF03061 Thioesterase superfamily JJQ97_RS15350 PF00300 Histidine phosphatase superfamily (branch 1) JJQ97_RS15360 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JJQ97_RS15360 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JJQ97_RS15365 PF00672 HAMP domain JJQ97_RS15365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS15365 PF00072 Response regulator receiver domain JJQ97_RS15365 PF01627 Hpt domain JJQ97_RS15365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ97_RS15365 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS15370 PF07977 FabA-like domain JJQ97_RS15375 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ97_RS15375 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ97_RS15385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS15385 PF00183 Hsp90 protein JJQ97_RS15395 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS15395 PF01609 Transposase DDE domain JJQ97_RS15395 PF01609 Transposase DDE domain JJQ97_RS15395 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS15400 PF00561 alpha/beta hydrolase fold JJQ97_RS15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS15405 PF03466 LysR substrate binding domain JJQ97_RS15410 PF00293 NUDIX domain JJQ97_RS15420 PF04356 Protein of unknown function (DUF489) JJQ97_RS15425 PF00206 Lyase JJQ97_RS15425 PF08328 Adenylosuccinate lyase C-terminal JJQ97_RS15430 PF08007 Cupin superfamily protein JJQ97_RS15435 PF13673 Acetyltransferase (GNAT) domain JJQ97_RS15445 PF00463 Isocitrate lyase family JJQ97_RS15450 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JJQ97_RS15455 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JJQ97_RS15460 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JJQ97_RS15460 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JJQ97_RS15470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JJQ97_RS15470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JJQ97_RS15475 PF00384 Molybdopterin oxidoreductase JJQ97_RS15475 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JJQ97_RS15475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JJQ97_RS15480 PF00146 NADH dehydrogenase JJQ97_RS15485 PF12838 4Fe-4S dicluster domain JJQ97_RS15490 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JJQ97_RS15495 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JJQ97_RS15500 PF00361 Proton-conducting membrane transporter JJQ97_RS15500 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JJQ97_RS15505 PF00361 Proton-conducting membrane transporter JJQ97_RS15510 PF00361 Proton-conducting membrane transporter JJQ97_RS15515 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS15515 PF01609 Transposase DDE domain JJQ97_RS15515 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS15515 PF01609 Transposase DDE domain JJQ97_RS15530 PF01594 AI-2E family transporter JJQ97_RS15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS15540 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS15540 PF00072 Response regulator receiver domain JJQ97_RS15555 PF01242 6-pyruvoyl tetrahydropterin synthase JJQ97_RS15585 PF00892 EamA-like transporter family JJQ97_RS15595 PF00557 Metallopeptidase family M24 JJQ97_RS15595 PF01321 Creatinase/Prolidase N-terminal domain JJQ97_RS15605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JJQ97_RS15615 PF00535 Glycosyl transferase family 2 JJQ97_RS15620 PF01451 Low molecular weight phosphotyrosine protein phosphatase JJQ97_RS15625 PF13614 AAA domain JJQ97_RS15625 PF02706 Chain length determinant protein JJQ97_RS15625 PF13807 G-rich domain on putative tyrosine kinase JJQ97_RS15645 PF00534 Glycosyl transferases group 1 JJQ97_RS15645 PF13439 Glycosyltransferase Family 4 JJQ97_RS15650 PF00534 Glycosyl transferases group 1 JJQ97_RS15650 PF13439 Glycosyltransferase Family 4 JJQ97_RS15655 PF02397 Bacterial sugar transferase JJQ97_RS15660 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JJQ97_RS15660 PF10531 SLBB domain JJQ97_RS15660 PF02563 Polysaccharide biosynthesis/export protein JJQ97_RS15665 PF03358 NADPH-dependent FMN reductase JJQ97_RS15670 PF01810 LysE type translocator JJQ97_RS15680 PF03466 LysR substrate binding domain JJQ97_RS15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS15685 PF01144 Coenzyme A transferase JJQ97_RS15690 PF01144 Coenzyme A transferase JJQ97_RS15695 PF02667 Short chain fatty acid transporter JJQ97_RS15700 PF03992 Antibiotic biosynthesis monooxygenase JJQ97_RS15705 PF06418 CTP synthase N-terminus JJQ97_RS15705 PF00117 Glutamine amidotransferase class-I JJQ97_RS15710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ97_RS15710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ97_RS15715 PF03009 Glycerophosphoryl diester phosphodiesterase family JJQ97_RS15720 PF00593 TonB dependent receptor JJQ97_RS15720 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS15725 PF13091 PLD-like domain JJQ97_RS15730 PF13298 DNA polymerase Ligase (LigD) JJQ97_RS15730 PF01068 ATP dependent DNA ligase domain JJQ97_RS15730 PF04679 ATP dependent DNA ligase C terminal region JJQ97_RS15735 PF02735 Ku70/Ku80 beta-barrel domain JJQ97_RS15740 PF00296 Luciferase-like monooxygenase JJQ97_RS15745 PF00158 Sigma-54 interaction domain JJQ97_RS15765 PF00361 Proton-conducting membrane transporter JJQ97_RS15765 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JJQ97_RS15765 PF13244 Domain of unknown function (DUF4040) JJQ97_RS15765 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JJQ97_RS15770 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JJQ97_RS15775 PF00361 Proton-conducting membrane transporter JJQ97_RS15785 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JJQ97_RS15790 PF03334 Na+/H+ antiporter subunit JJQ97_RS15810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS15815 PF01258 Prokaryotic dksA/traR C4-type zinc finger JJQ97_RS15820 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS15825 PF00005 ABC transporter JJQ97_RS15830 PF13407 Periplasmic binding protein domain JJQ97_RS15840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JJQ97_RS15840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JJQ97_RS15845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JJQ97_RS15845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JJQ97_RS15850 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ97_RS15850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ97_RS15850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ97_RS15855 PF00171 Aldehyde dehydrogenase family JJQ97_RS15860 PF04962 KduI/IolB family JJQ97_RS15865 PF01261 Xylose isomerase-like TIM barrel JJQ97_RS15870 PF00294 pfkB family carbohydrate kinase JJQ97_RS15875 PF01418 Helix-turn-helix domain, rpiR family JJQ97_RS15875 PF01380 SIS domain JJQ97_RS15880 PF03706 Lysylphosphatidylglycerol synthase TM region JJQ97_RS15885 PF13091 PLD-like domain JJQ97_RS15890 PF03372 Endonuclease/Exonuclease/phosphatase family JJQ97_RS15900 PF01048 Phosphorylase superfamily JJQ97_RS15905 PF00933 Glycosyl hydrolase family 3 N terminal domain JJQ97_RS15910 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS15915 PF00717 Peptidase S24-like JJQ97_RS15915 PF01726 LexA DNA binding domain JJQ97_RS15920 PF03846 Cell division inhibitor SulA JJQ97_RS15935 PF01396 Topoisomerase DNA binding C4 zinc finger JJQ97_RS15935 PF01751 Toprim domain JJQ97_RS15935 PF01131 DNA topoisomerase JJQ97_RS15935 PF08272 Topoisomerase I zinc-ribbon-like JJQ97_RS15945 PF00108 Thiolase, N-terminal domain JJQ97_RS15945 PF02803 Thiolase, C-terminal domain JJQ97_RS15950 PF00378 Enoyl-CoA hydratase/isomerase JJQ97_RS15950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JJQ97_RS15950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JJQ97_RS15965 PF00582 Universal stress protein family JJQ97_RS15970 PF00005 ABC transporter JJQ97_RS15970 PF12848 ABC transporter JJQ97_RS15970 PF16326 ABC transporter C-terminal domain JJQ97_RS15975 PF01464 Transglycosylase SLT domain JJQ97_RS15975 PF14718 Soluble lytic murein transglycosylase L domain JJQ97_RS15980 PF03473 MOSC domain JJQ97_RS15980 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ97_RS15980 PF03476 MOSC N-terminal beta barrel domain JJQ97_RS15995 PF00072 Response regulator receiver domain JJQ97_RS15995 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS16000 PF00781 Diacylglycerol kinase catalytic domain JJQ97_RS16005 PF02397 Bacterial sugar transferase JJQ97_RS16010 PF01050 Mannose-6-phosphate isomerase JJQ97_RS16010 PF00483 Nucleotidyl transferase JJQ97_RS16050 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ97_RS16055 PF03023 Lipid II flippase MurJ JJQ97_RS16060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS16060 PF03466 LysR substrate binding domain JJQ97_RS16095 PF03466 LysR substrate binding domain JJQ97_RS16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS16100 PF07690 Major Facilitator Superfamily JJQ97_RS16105 PF12706 Beta-lactamase superfamily domain JJQ97_RS16110 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS16120 PF04209 homogentisate 1,2-dioxygenase JJQ97_RS16130 PF01590 GAF domain JJQ97_RS16130 PF00563 EAL domain JJQ97_RS16130 PF00360 Phytochrome region JJQ97_RS16130 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS16135 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS16135 PF00563 EAL domain JJQ97_RS16135 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS16140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ97_RS16145 PF01565 FAD binding domain JJQ97_RS16145 PF02913 FAD linked oxidases, C-terminal domain JJQ97_RS16150 PF01565 FAD binding domain JJQ97_RS16155 PF02754 Cysteine-rich domain JJQ97_RS16155 PF13183 4Fe-4S dicluster domain JJQ97_RS16160 PF03928 Haem-degrading JJQ97_RS16170 PF00356 Bacterial regulatory proteins, lacI family JJQ97_RS16180 PF02447 GntP family permease JJQ97_RS16185 PF02599 Global regulator protein family JJQ97_RS16205 PF12146 Serine aminopeptidase, S33 JJQ97_RS16210 PF00583 Acetyltransferase (GNAT) family JJQ97_RS16215 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS16225 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS16230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS16230 PF00672 HAMP domain JJQ97_RS16230 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS16240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS16240 PF00672 HAMP domain JJQ97_RS16240 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS16250 PF00199 Catalase JJQ97_RS16250 PF06628 Catalase-related immune-responsive JJQ97_RS16260 PF13426 PAS domain JJQ97_RS16260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS16260 PF00072 Response regulator receiver domain JJQ97_RS16270 PF03466 LysR substrate binding domain JJQ97_RS16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS16280 PF02567 Phenazine biosynthesis-like protein JJQ97_RS16285 PF07690 Major Facilitator Superfamily JJQ97_RS16290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JJQ97_RS16290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JJQ97_RS16295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JJQ97_RS16300 PF00293 NUDIX domain JJQ97_RS16305 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JJQ97_RS16310 PF01494 FAD binding domain JJQ97_RS16325 PF01048 Phosphorylase superfamily JJQ97_RS16330 PF00293 NUDIX domain JJQ97_RS16345 PF13419 Haloacid dehalogenase-like hydrolase JJQ97_RS16355 PF03969 AFG1-like ATPase JJQ97_RS16360 PF00916 Sulfate permease family JJQ97_RS16360 PF01740 STAS domain JJQ97_RS16365 PF00144 Beta-lactamase JJQ97_RS16375 PF00561 alpha/beta hydrolase fold JJQ97_RS16385 PF07859 alpha/beta hydrolase fold JJQ97_RS16415 PF12833 Helix-turn-helix domain JJQ97_RS16415 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JJQ97_RS16415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JJQ97_RS16415 PF02805 Metal binding domain of Ada JJQ97_RS16420 PF00730 HhH-GPD superfamily base excision DNA repair protein JJQ97_RS16425 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA JJQ97_RS16430 PF03239 Iron permease FTR1 family JJQ97_RS16435 PF13473 Cupredoxin-like domain JJQ97_RS16435 PF09375 Imelysin JJQ97_RS16440 PF04261 Dyp-type peroxidase family JJQ97_RS16445 PF09375 Imelysin JJQ97_RS16445 PF13473 Cupredoxin-like domain JJQ97_RS16450 PF00174 Oxidoreductase molybdopterin binding domain JJQ97_RS16455 PF01292 Prokaryotic cytochrome b561 JJQ97_RS16465 PF00072 Response regulator receiver domain JJQ97_RS16465 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS16470 PF00672 HAMP domain JJQ97_RS16470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS16470 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS16485 PF04632 Fusaric acid resistance protein family JJQ97_RS16495 PF13533 Biotin-lipoyl like JJQ97_RS16500 PF02321 Outer membrane efflux protein JJQ97_RS16505 PF13302 Acetyltransferase (GNAT) domain JJQ97_RS16510 PF00027 Cyclic nucleotide-binding domain JJQ97_RS16510 PF00520 Ion transport protein JJQ97_RS16530 PF03918 Cytochrome C biogenesis protein JJQ97_RS16535 PF08534 Redoxin JJQ97_RS16540 PF01578 Cytochrome C assembly protein JJQ97_RS16540 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JJQ97_RS16545 PF03100 CcmE JJQ97_RS16550 PF04995 Heme exporter protein D (CcmD) JJQ97_RS16555 PF01578 Cytochrome C assembly protein JJQ97_RS16560 PF03379 CcmB protein JJQ97_RS16565 PF00005 ABC transporter JJQ97_RS16575 PF01312 FlhB HrpN YscU SpaS Family JJQ97_RS16580 PF13662 Toprim domain JJQ97_RS16580 PF02132 RecR protein JJQ97_RS16585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS16585 PF03466 LysR substrate binding domain JJQ97_RS16590 PF14031 Putative serine dehydratase domain JJQ97_RS16590 PF01168 Alanine racemase, N-terminal domain JJQ97_RS16595 PF01042 Endoribonuclease L-PSP JJQ97_RS16600 PF01266 FAD dependent oxidoreductase JJQ97_RS16610 PF00171 Aldehyde dehydrogenase family JJQ97_RS16615 PF01728 FtsJ-like methyltransferase JJQ97_RS16615 PF18125 RlmM ferredoxin-like domain JJQ97_RS16620 PF00694 Aconitase C-terminal domain JJQ97_RS16620 PF00330 Aconitase family (aconitate hydratase) JJQ97_RS16630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS16630 PF00672 HAMP domain JJQ97_RS16640 PF13018 Extended Signal Peptide of Type V secretion system JJQ97_RS16640 PF03797 Autotransporter beta-domain JJQ97_RS16640 PF03212 Pertactin JJQ97_RS16640 PF16168 Adhesin of bacterial autotransporter system, probable stalk JJQ97_RS16665 PF00115 Cytochrome C and Quinol oxidase polypeptide I JJQ97_RS16680 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JJQ97_RS16680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ97_RS16695 PF13746 4Fe-4S dicluster domain JJQ97_RS16695 PF12801 4Fe-4S binding domain JJQ97_RS16695 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JJQ97_RS16705 PF00403 Heavy-metal-associated domain JJQ97_RS16720 PF04055 Radical SAM superfamily JJQ97_RS16720 PF06969 HemN C-terminal domain JJQ97_RS16730 PF00027 Cyclic nucleotide-binding domain JJQ97_RS16730 PF13545 Crp-like helix-turn-helix domain JJQ97_RS16735 PF00156 Phosphoribosyl transferase domain JJQ97_RS16745 PF01584 CheW-like domain JJQ97_RS16755 PF13614 AAA domain JJQ97_RS16760 PF13677 Membrane MotB of proton-channel complex MotA/MotB JJQ97_RS16760 PF00691 OmpA family JJQ97_RS16765 PF01618 MotA/TolQ/ExbB proton channel family JJQ97_RS16770 PF01339 CheB methylesterase JJQ97_RS16770 PF00072 Response regulator receiver domain JJQ97_RS16775 PF01584 CheW-like domain JJQ97_RS16775 PF00072 Response regulator receiver domain JJQ97_RS16775 PF02895 Signal transducing histidine kinase, homodimeric domain JJQ97_RS16775 PF01627 Hpt domain JJQ97_RS16775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS16780 PF04344 Chemotaxis phosphatase, CheZ JJQ97_RS16785 PF00072 Response regulator receiver domain JJQ97_RS16790 PF04542 Sigma-70 region 2 JJQ97_RS16790 PF04539 Sigma-70 region 3 JJQ97_RS16790 PF04545 Sigma-70, region 4 JJQ97_RS16795 PF10609 NUBPL iron-transfer P-loop NTPase JJQ97_RS16800 PF00448 SRP54-type protein, GTPase domain JJQ97_RS16805 PF00771 FHIPEP family JJQ97_RS16810 PF01312 FlhB HrpN YscU SpaS Family JJQ97_RS16815 PF01311 Bacterial export proteins, family 1 JJQ97_RS16820 PF01313 Bacterial export proteins, family 3 JJQ97_RS16825 PF00813 FliP family JJQ97_RS16830 PF04347 Flagellar biosynthesis protein, FliO JJQ97_RS16835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JJQ97_RS16840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JJQ97_RS16840 PF02154 Flagellar motor switch protein FliM JJQ97_RS16860 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS16860 PF00072 Response regulator receiver domain JJQ97_RS16865 PF13466 STAS domain JJQ97_RS16875 PF18269 T3SS EscN ATPase C-terminal domain JJQ97_RS16875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJQ97_RS16885 PF01706 FliG C-terminal domain JJQ97_RS16885 PF14841 FliG middle domain JJQ97_RS16885 PF14842 FliG N-terminal domain JJQ97_RS16890 PF08345 Flagellar M-ring protein C-terminal JJQ97_RS16890 PF01514 Secretory protein of YscJ/FliF family JJQ97_RS16895 PF02049 Flagellar hook-basal body complex protein FliE JJQ97_RS16900 PF00158 Sigma-54 interaction domain JJQ97_RS16900 PF00072 Response regulator receiver domain JJQ97_RS16900 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS16905 PF13188 PAS domain JJQ97_RS16905 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS16905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS16910 PF00158 Sigma-54 interaction domain JJQ97_RS16910 PF06490 Flagellar regulatory protein FleQ JJQ97_RS16910 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS16920 PF02561 Flagellar protein FliS JJQ97_RS16925 PF07195 Flagellar hook-associated protein 2 C-terminus JJQ97_RS16925 PF02465 Flagellar hook-associated protein 2 N-terminus JJQ97_RS16925 PF07196 Flagellin hook IN motif JJQ97_RS16930 PF03646 FlaG protein JJQ97_RS16935 PF07196 Flagellin hook IN motif JJQ97_RS16935 PF00669 Bacterial flagellin N-terminal helical region JJQ97_RS16935 PF00700 Bacterial flagellin C-terminal helical region JJQ97_RS16940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JJQ97_RS16940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JJQ97_RS16945 PF00535 Glycosyl transferase family 2 JJQ97_RS16950 PF00535 Glycosyl transferase family 2 JJQ97_RS16955 PF00700 Bacterial flagellin C-terminal helical region JJQ97_RS16955 PF00669 Bacterial flagellin N-terminal helical region JJQ97_RS16965 PF10135 Rod binding protein JJQ97_RS16965 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JJQ97_RS16970 PF02119 Flagellar P-ring protein JJQ97_RS16975 PF02107 Flagellar L-ring protein JJQ97_RS16980 PF00460 Flagella basal body rod protein JJQ97_RS16980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JJQ97_RS16985 PF00460 Flagella basal body rod protein JJQ97_RS16985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JJQ97_RS16995 PF07559 Flagellar basal body protein FlaE JJQ97_RS16995 PF00460 Flagella basal body rod protein JJQ97_RS16995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JJQ97_RS17000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JJQ97_RS17000 PF00460 Flagella basal body rod protein JJQ97_RS17000 PF07559 Flagellar basal body protein FlaE JJQ97_RS17005 PF03963 Flagellar hook capping protein - N-terminal region JJQ97_RS17010 PF00460 Flagella basal body rod protein JJQ97_RS17010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JJQ97_RS17015 PF00460 Flagella basal body rod protein JJQ97_RS17030 PF02560 Cyanate lyase C-terminal domain JJQ97_RS17035 PF03466 LysR substrate binding domain JJQ97_RS17035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS17045 PF03705 CheR methyltransferase, all-alpha domain JJQ97_RS17045 PF01739 CheR methyltransferase, SAM binding domain JJQ97_RS17050 PF01584 CheW-like domain JJQ97_RS17050 PF00072 Response regulator receiver domain JJQ97_RS17070 PF07238 PilZ domain JJQ97_RS17070 PF07317 Flagellar regulator YcgR JJQ97_RS17075 PF07690 Major Facilitator Superfamily JJQ97_RS17080 PF00120 Glutamine synthetase, catalytic domain JJQ97_RS17105 PF08239 Bacterial SH3 domain JJQ97_RS17110 PF03641 Possible lysine decarboxylase JJQ97_RS17110 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JJQ97_RS17110 PF11892 Domain of unknown function (DUF3412) JJQ97_RS17120 PF01494 FAD binding domain JJQ97_RS17125 PF07690 Major Facilitator Superfamily JJQ97_RS17140 PF08446 PAS fold JJQ97_RS17140 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS17140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS17140 PF01590 GAF domain JJQ97_RS17140 PF00360 Phytochrome region JJQ97_RS17175 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS17175 PF00072 Response regulator receiver domain JJQ97_RS17180 PF08521 Two-component sensor kinase N-terminal JJQ97_RS17180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS17180 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS17185 PF01266 FAD dependent oxidoreductase JJQ97_RS17190 PF00171 Aldehyde dehydrogenase family JJQ97_RS17195 PF00202 Aminotransferase class-III JJQ97_RS17200 PF07063 Domain of unknown function (DUF1338) JJQ97_RS17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS17210 PF03466 LysR substrate binding domain JJQ97_RS17215 PF03313 Serine dehydratase alpha chain JJQ97_RS17215 PF03315 Serine dehydratase beta chain JJQ97_RS17220 PF01810 LysE type translocator JJQ97_RS17230 PF03466 LysR substrate binding domain JJQ97_RS17230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS17235 PF07687 Peptidase dimerisation domain JJQ97_RS17235 PF01546 Peptidase family M20/M25/M40 JJQ97_RS17240 PF00171 Aldehyde dehydrogenase family JJQ97_RS17245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JJQ97_RS17245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JJQ97_RS17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS17250 PF03466 LysR substrate binding domain JJQ97_RS17255 PF00107 Zinc-binding dehydrogenase JJQ97_RS17255 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS17255 PF13823 Alcohol dehydrogenase GroES-associated JJQ97_RS17260 PF01177 Asp/Glu/Hydantoin racemase JJQ97_RS17270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JJQ97_RS17275 PF00072 Response regulator receiver domain JJQ97_RS17275 PF13426 PAS domain JJQ97_RS17275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS17285 PF01965 DJ-1/PfpI family JJQ97_RS17285 PF12833 Helix-turn-helix domain JJQ97_RS17305 PF12794 Mechanosensitive ion channel inner membrane domain 1 JJQ97_RS17305 PF12795 Mechanosensitive ion channel porin domain JJQ97_RS17305 PF00924 Mechanosensitive ion channel JJQ97_RS17325 PF03869 Arc-like DNA binding domain JJQ97_RS17330 PF03448 MgtE intracellular N domain JJQ97_RS17330 PF01769 Divalent cation transporter JJQ97_RS17330 PF00571 CBS domain JJQ97_RS17355 PF02599 Global regulator protein family JJQ97_RS17360 PF13840 ACT domain JJQ97_RS17360 PF01842 ACT domain JJQ97_RS17360 PF00696 Amino acid kinase family JJQ97_RS17365 PF01411 tRNA synthetases class II (A) JJQ97_RS17365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JJQ97_RS17365 PF02272 DHHA1 domain JJQ97_RS17370 PF01212 Beta-eliminating lyase JJQ97_RS17375 PF00885 6,7-dimethyl-8-ribityllumazine synthase JJQ97_RS17380 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JJQ97_RS17390 PF04996 Succinylarginine dihydrolase JJQ97_RS17395 PF00171 Aldehyde dehydrogenase family JJQ97_RS17400 PF04958 Arginine N-succinyltransferase beta subunit JJQ97_RS17405 PF04958 Arginine N-succinyltransferase beta subunit JJQ97_RS17410 PF00202 Aminotransferase class-III JJQ97_RS17415 PF12833 Helix-turn-helix domain JJQ97_RS17420 PF00005 ABC transporter JJQ97_RS17430 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS17435 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS17440 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS17445 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS17445 PF16177 Acetyl-coenzyme A synthetase N-terminus JJQ97_RS17445 PF00501 AMP-binding enzyme JJQ97_RS17455 PF00158 Sigma-54 interaction domain JJQ97_RS17455 PF18024 Helix-turn-helix domain JJQ97_RS17460 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JJQ97_RS17465 PF01329 Pterin 4 alpha carbinolamine dehydratase JJQ97_RS17475 PF07690 Major Facilitator Superfamily JJQ97_RS17480 PF00472 RF-1 domain JJQ97_RS17485 PF00324 Amino acid permease JJQ97_RS17490 PF00849 RNA pseudouridylate synthase JJQ97_RS17490 PF01479 S4 domain JJQ97_RS17500 PF04079 Segregation and condensation complex subunit ScpB JJQ97_RS17505 PF02616 Segregation and condensation protein ScpA JJQ97_RS17510 PF01300 Telomere recombination JJQ97_RS17515 PF02811 PHP domain JJQ97_RS17520 PF04279 Intracellular septation protein A JJQ97_RS17525 PF03795 YCII-related domain JJQ97_RS17535 PF00072 Response regulator receiver domain JJQ97_RS17535 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS17545 PF08521 Two-component sensor kinase N-terminal JJQ97_RS17545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS17545 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS17555 PF02386 Cation transport protein JJQ97_RS17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS17585 PF03466 LysR substrate binding domain JJQ97_RS17590 PF02678 Pirin JJQ97_RS17590 PF17954 Quercetinase C-terminal cupin domain JJQ97_RS17620 PF13185 GAF domain JJQ97_RS17630 PF00072 Response regulator receiver domain JJQ97_RS17630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ97_RS17630 PF00672 HAMP domain JJQ97_RS17630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS17630 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS17630 PF01627 Hpt domain JJQ97_RS17635 PF00255 Glutathione peroxidase JJQ97_RS17640 PF01641 SelR domain JJQ97_RS17645 PF00155 Aminotransferase class I and II JJQ97_RS17650 PF01435 Peptidase family M48 JJQ97_RS17655 PF05724 Thiopurine S-methyltransferase (TPMT) JJQ97_RS17660 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JJQ97_RS17665 PF03880 DbpA RNA binding domain JJQ97_RS17665 PF00270 DEAD/DEAH box helicase JJQ97_RS17665 PF00271 Helicase conserved C-terminal domain JJQ97_RS17680 PF01474 Class-II DAHP synthetase family JJQ97_RS17685 PF06568 Domain of unknown function (DUF1127) JJQ97_RS17690 PF03466 LysR substrate binding domain JJQ97_RS17690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS17700 PF01047 MarR family JJQ97_RS17705 PF02566 OsmC-like protein JJQ97_RS17710 PF08207 Elongation factor P (EF-P) KOW-like domain JJQ97_RS17710 PF09285 Elongation factor P, C-terminal JJQ97_RS17710 PF01132 Elongation factor P (EF-P) OB domain JJQ97_RS17740 PF00578 AhpC/TSA family JJQ97_RS17755 PF02719 Polysaccharide biosynthesis protein JJQ97_RS17760 PF00953 Glycosyl transferase family 4 JJQ97_RS17765 PF01370 NAD dependent epimerase/dehydratase family JJQ97_RS17770 PF00753 Metallo-beta-lactamase superfamily JJQ97_RS17770 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JJQ97_RS17770 PF10996 Beta-Casp domain JJQ97_RS17780 PF00216 Bacterial DNA-binding protein JJQ97_RS17785 PF00575 S1 RNA binding domain JJQ97_RS17790 PF02224 Cytidylate kinase JJQ97_RS17795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JJQ97_RS17800 PF01842 ACT domain JJQ97_RS17800 PF00800 Prephenate dehydratase JJQ97_RS17800 PF01817 Chorismate mutase type II JJQ97_RS17805 PF00266 Aminotransferase class-V JJQ97_RS17810 PF03989 DNA gyrase C-terminal domain, beta-propeller JJQ97_RS17810 PF00521 DNA gyrase/topoisomerase IV, subunit A JJQ97_RS17815 PF01008 Initiation factor 2 subunit family JJQ97_RS17820 PF01979 Amidohydrolase family JJQ97_RS17830 PF13419 Haloacid dehalogenase-like hydrolase JJQ97_RS17835 PF00106 short chain dehydrogenase JJQ97_RS17840 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS17850 PF08448 PAS fold JJQ97_RS17850 PF00563 EAL domain JJQ97_RS17850 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS17855 PF00005 ABC transporter JJQ97_RS17855 PF00664 ABC transporter transmembrane region JJQ97_RS17865 PF17773 UPF0176 acylphosphatase like domain JJQ97_RS17865 PF00581 Rhodanese-like domain JJQ97_RS17870 PF01722 BolA-like protein JJQ97_RS17880 PF00206 Lyase JJQ97_RS17880 PF10415 Fumarase C C-terminus JJQ97_RS17890 PF00892 EamA-like transporter family JJQ97_RS17905 PF02646 RmuC family JJQ97_RS17920 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JJQ97_RS17925 PF00255 Glutathione peroxidase JJQ97_RS17935 PF02654 Cobalamin-5-phosphate synthase JJQ97_RS17940 PF00300 Histidine phosphatase superfamily (branch 1) JJQ97_RS17945 PF02277 Phosphoribosyltransferase JJQ97_RS17950 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JJQ97_RS17955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JJQ97_RS17955 PF07685 CobB/CobQ-like glutamine amidotransferase domain JJQ97_RS17960 PF00155 Aminotransferase class I and II JJQ97_RS17965 PF17113 Regulatory signalling modulator protein AmpE JJQ97_RS17965 PF03186 CobD/Cbib protein JJQ97_RS17970 PF00881 Nitroreductase family JJQ97_RS17975 PF07685 CobB/CobQ-like glutamine amidotransferase domain JJQ97_RS17975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JJQ97_RS17980 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JJQ97_RS17980 PF12557 Cob(I)alamin adenosyltransferase N terminal JJQ97_RS17985 PF07995 Glucose / Sorbosone dehydrogenase JJQ97_RS17990 PF00877 NlpC/P60 family JJQ97_RS17995 PF01476 LysM domain JJQ97_RS17995 PF00877 NlpC/P60 family JJQ97_RS18000 PF02146 Sir2 family JJQ97_RS18005 PF00308 Bacterial dnaA protein JJQ97_RS18010 PF01594 AI-2E family transporter JJQ97_RS18020 PF00586 AIR synthase related protein, N-terminal domain JJQ97_RS18020 PF02769 AIR synthase related protein, C-terminal domain JJQ97_RS18025 PF00551 Formyl transferase JJQ97_RS18045 PF03819 MazG nucleotide pyrophosphohydrolase domain JJQ97_RS18050 PF02824 TGS domain JJQ97_RS18050 PF04607 Region found in RelA / SpoT proteins JJQ97_RS18050 PF13291 ACT domain JJQ97_RS18055 PF05958 tRNA (Uracil-5-)-methyltransferase JJQ97_RS18055 PF01938 TRAM domain JJQ97_RS18060 PF00291 Pyridoxal-phosphate dependent enzyme JJQ97_RS18065 PF01627 Hpt domain JJQ97_RS18065 PF00072 Response regulator receiver domain JJQ97_RS18065 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS18065 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ97_RS18065 PF00672 HAMP domain JJQ97_RS18065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS18085 PF00085 Thioredoxin JJQ97_RS18090 PF03960 ArsC family JJQ97_RS18095 PF03358 NADPH-dependent FMN reductase JJQ97_RS18100 PF03352 Methyladenine glycosylase JJQ97_RS18105 PF01171 PP-loop family JJQ97_RS18110 PF10263 SprT-like family JJQ97_RS18115 PF00375 Sodium:dicarboxylate symporter family JJQ97_RS18120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS18125 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS18125 PF00072 Response regulator receiver domain JJQ97_RS18135 PF01738 Dienelactone hydrolase family JJQ97_RS18150 PF17837 4'-phosphopantetheinyl transferase N-terminal domain JJQ97_RS18150 PF01648 4'-phosphopantetheinyl transferase superfamily JJQ97_RS18160 PF00672 HAMP domain JJQ97_RS18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS18160 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS18165 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS18165 PF00072 Response regulator receiver domain JJQ97_RS18170 PF00317 Ribonucleotide reductase, all-alpha domain JJQ97_RS18170 PF02867 Ribonucleotide reductase, barrel domain JJQ97_RS18170 PF03477 ATP cone domain JJQ97_RS18175 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JJQ97_RS18175 PF09363 XFP C-terminal domain JJQ97_RS18175 PF09364 XFP N-terminal domain JJQ97_RS18180 PF00871 Acetokinase family JJQ97_RS18190 PF13545 Crp-like helix-turn-helix domain JJQ97_RS18190 PF00027 Cyclic nucleotide-binding domain JJQ97_RS18210 PF00268 Ribonucleotide reductase, small chain JJQ97_RS18215 PF01844 HNH endonuclease JJQ97_RS18260 PF12951 Passenger-associated-transport-repeat JJQ97_RS18260 PF03797 Autotransporter beta-domain JJQ97_RS18260 PF00082 Subtilase family JJQ97_RS18265 PF00082 Subtilase family JJQ97_RS18265 PF12951 Passenger-associated-transport-repeat JJQ97_RS18265 PF03797 Autotransporter beta-domain JJQ97_RS18280 PF01047 MarR family JJQ97_RS18285 PF00271 Helicase conserved C-terminal domain JJQ97_RS18285 PF00570 HRDC domain JJQ97_RS18285 PF16124 RecQ zinc-binding JJQ97_RS18285 PF09382 RQC domain JJQ97_RS18285 PF00270 DEAD/DEAH box helicase JJQ97_RS18295 PF04304 Protein of unknown function (DUF454) JJQ97_RS18300 PF03976 Polyphosphate kinase 2 (PPK2) JJQ97_RS18305 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JJQ97_RS18305 PF01266 FAD dependent oxidoreductase JJQ97_RS18310 PF00005 ABC transporter JJQ97_RS18340 PF00733 Asparagine synthase JJQ97_RS18340 PF13537 Glutamine amidotransferase domain JJQ97_RS18345 PF08443 RimK-like ATP-grasp domain JJQ97_RS18345 PF08245 Mur ligase middle domain JJQ97_RS18345 PF02875 Mur ligase family, glutamate ligase domain JJQ97_RS18350 PF05343 M42 glutamyl aminopeptidase JJQ97_RS18355 PF06794 Uncharacterised protein family (UPF0270) JJQ97_RS18360 PF02599 Global regulator protein family JJQ97_RS18365 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JJQ97_RS18370 PF00106 short chain dehydrogenase JJQ97_RS18370 PF00561 alpha/beta hydrolase fold JJQ97_RS18385 PF00474 Sodium:solute symporter family JJQ97_RS18390 PF04341 Protein of unknown function, DUF485 JJQ97_RS18395 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JJQ97_RS18405 PF04333 MlaA lipoprotein JJQ97_RS18415 PF07690 Major Facilitator Superfamily JJQ97_RS18420 PF05230 MASE2 domain JJQ97_RS18420 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS18435 PF00072 Response regulator receiver domain JJQ97_RS18435 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS18440 PF08946 Osmosensory transporter coiled coil JJQ97_RS18440 PF00083 Sugar (and other) transporter JJQ97_RS18455 PF07995 Glucose / Sorbosone dehydrogenase JJQ97_RS18465 PF01590 GAF domain JJQ97_RS18465 PF00360 Phytochrome region JJQ97_RS18465 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS18465 PF08446 PAS fold JJQ97_RS18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS18470 PF07689 KaiB domain JJQ97_RS18470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS18470 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS18475 PF12697 Alpha/beta hydrolase family JJQ97_RS18480 PF14437 MafB19-like deaminase JJQ97_RS18500 PF01327 Polypeptide deformylase JJQ97_RS18505 PF03631 Virulence factor BrkB JJQ97_RS18510 PF05532 CsbD-like JJQ97_RS18525 PF01323 DSBA-like thioredoxin domain JJQ97_RS18530 PF17783 CvfB-like winged helix domain JJQ97_RS18530 PF13509 S1 domain JJQ97_RS18560 PF00271 Helicase conserved C-terminal domain JJQ97_RS18560 PF00270 DEAD/DEAH box helicase JJQ97_RS18570 PF00501 AMP-binding enzyme JJQ97_RS18590 PF00072 Response regulator receiver domain JJQ97_RS18590 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS18595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS18595 PF08521 Two-component sensor kinase N-terminal JJQ97_RS18595 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS18600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS18600 PF03466 LysR substrate binding domain JJQ97_RS18605 PF02525 Flavodoxin-like fold JJQ97_RS18610 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JJQ97_RS18615 PF07690 Major Facilitator Superfamily JJQ97_RS18620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS18620 PF03466 LysR substrate binding domain JJQ97_RS18630 PF00924 Mechanosensitive ion channel JJQ97_RS18695 PF00892 EamA-like transporter family JJQ97_RS18700 PF12708 Pectate lyase superfamily protein JJQ97_RS18700 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JJQ97_RS18700 PF13229 Right handed beta helix region JJQ97_RS18715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JJQ97_RS18720 PF00005 ABC transporter JJQ97_RS18720 PF00664 ABC transporter transmembrane region JJQ97_RS18735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JJQ97_RS18735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JJQ97_RS18740 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JJQ97_RS18740 PF04408 Helicase associated domain (HA2) JJQ97_RS18740 PF11898 Domain of unknown function (DUF3418) JJQ97_RS18740 PF00271 Helicase conserved C-terminal domain JJQ97_RS18740 PF00270 DEAD/DEAH box helicase JJQ97_RS18745 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS18745 PF00501 AMP-binding enzyme JJQ97_RS18750 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS18750 PF00501 AMP-binding enzyme JJQ97_RS18755 PF01575 MaoC like domain JJQ97_RS18770 PF18337 RapA N-terminal Tudor like domain JJQ97_RS18770 PF18339 RapA N-terminal Tudor like domain 1 JJQ97_RS18770 PF12137 RNA polymerase recycling family C-terminal JJQ97_RS18770 PF00271 Helicase conserved C-terminal domain JJQ97_RS18770 PF00176 SNF2 family N-terminal domain JJQ97_RS18775 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS18775 PF00563 EAL domain JJQ97_RS18775 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS18790 PF13458 Periplasmic binding protein JJQ97_RS18795 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS18800 PF11862 Domain of unknown function (DUF3382) JJQ97_RS18800 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS18805 PF00005 ABC transporter JJQ97_RS18805 PF12399 Branched-chain amino acid ATP-binding cassette transporter JJQ97_RS18810 PF00005 ABC transporter JJQ97_RS18830 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JJQ97_RS18830 PF01243 Pyridoxamine 5'-phosphate oxidase JJQ97_RS18835 PF00691 OmpA family JJQ97_RS18835 PF04972 BON domain JJQ97_RS18840 PF00144 Beta-lactamase JJQ97_RS18845 PF13307 Helicase C-terminal domain JJQ97_RS18845 PF06733 DEAD_2 JJQ97_RS18855 PF03502 Nucleoside-specific channel-forming protein, Tsx JJQ97_RS18875 PF00892 EamA-like transporter family JJQ97_RS18890 PF01820 D-ala D-ala ligase N-terminus JJQ97_RS18890 PF07478 D-ala D-ala ligase C-terminus JJQ97_RS18895 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ97_RS18895 PF00970 Oxidoreductase FAD-binding domain JJQ97_RS18895 PF00175 Oxidoreductase NAD-binding domain JJQ97_RS18910 PF02810 SEC-C motif JJQ97_RS18945 PF07516 SecA Wing and Scaffold domain JJQ97_RS18945 PF02810 SEC-C motif JJQ97_RS18945 PF01043 SecA preprotein cross-linking domain JJQ97_RS18945 PF07517 SecA DEAD-like domain JJQ97_RS18950 PF01804 Penicillin amidase JJQ97_RS18955 PF01068 ATP dependent DNA ligase domain JJQ97_RS18955 PF04679 ATP dependent DNA ligase C terminal region JJQ97_RS18955 PF04675 DNA ligase N terminus JJQ97_RS18960 PF04679 ATP dependent DNA ligase C terminal region JJQ97_RS18960 PF01068 ATP dependent DNA ligase domain JJQ97_RS18960 PF04675 DNA ligase N terminus JJQ97_RS18965 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS18970 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS18975 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS18985 PF00005 ABC transporter JJQ97_RS18990 PF00270 DEAD/DEAH box helicase JJQ97_RS18990 PF00271 Helicase conserved C-terminal domain JJQ97_RS18990 PF08494 DEAD/H associated JJQ97_RS19005 PF00692 dUTPase JJQ97_RS19010 PF00313 'Cold-shock' DNA-binding domain JJQ97_RS19015 PF10609 NUBPL iron-transfer P-loop NTPase JJQ97_RS19020 PF09334 tRNA synthetases class I (M) JJQ97_RS19020 PF01588 Putative tRNA binding domain JJQ97_RS19025 PF04060 Putative Fe-S cluster JJQ97_RS19030 PF00633 Helix-hairpin-helix motif JJQ97_RS19030 PF10576 Iron-sulfur binding domain of endonuclease III JJQ97_RS19030 PF00730 HhH-GPD superfamily base excision DNA repair protein JJQ97_RS19040 PF00072 Response regulator receiver domain JJQ97_RS19040 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS19050 PF00764 Arginosuccinate synthase JJQ97_RS19060 PF01979 Amidohydrolase family JJQ97_RS19065 PF00929 Exonuclease JJQ97_RS19070 PF04324 BFD-like [2Fe-2S] binding domain JJQ97_RS19075 PF00210 Ferritin-like domain JJQ97_RS19080 PF00462 Glutaredoxin JJQ97_RS19085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JJQ97_RS19085 PF01568 Molydopterin dinucleotide binding domain JJQ97_RS19085 PF00384 Molybdopterin oxidoreductase JJQ97_RS19095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JJQ97_RS19095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JJQ97_RS19100 PF17845 FbpC C-terminal regulatory nucleotide binding domain JJQ97_RS19100 PF00005 ABC transporter JJQ97_RS19105 PF04073 Aminoacyl-tRNA editing domain JJQ97_RS19110 PF00230 Major intrinsic protein JJQ97_RS19115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JJQ97_RS19115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JJQ97_RS19120 PF08220 DeoR-like helix-turn-helix domain JJQ97_RS19120 PF00455 DeoR C terminal sensor domain JJQ97_RS19125 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JJQ97_RS19125 PF01266 FAD dependent oxidoreductase JJQ97_RS19130 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS19135 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS19140 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS19145 PF00005 ABC transporter JJQ97_RS19150 PF02743 Cache domain JJQ97_RS19150 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS19150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS19155 PF00158 Sigma-54 interaction domain JJQ97_RS19155 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS19155 PF00072 Response regulator receiver domain JJQ97_RS19165 PF00561 alpha/beta hydrolase fold JJQ97_RS19170 PF08267 Cobalamin-independent synthase, N-terminal domain JJQ97_RS19170 PF01717 Cobalamin-independent synthase, Catalytic domain JJQ97_RS19175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS19175 PF03466 LysR substrate binding domain JJQ97_RS19185 PF01820 D-ala D-ala ligase N-terminus JJQ97_RS19185 PF07478 D-ala D-ala ligase C-terminus JJQ97_RS19190 PF01197 Ribosomal protein L31 JJQ97_RS19220 PF03551 Transcriptional regulator PadR-like family JJQ97_RS19225 PF04954 Siderophore-interacting protein JJQ97_RS19225 PF08021 Siderophore-interacting FAD-binding domain JJQ97_RS19235 PF09905 DNA-binding protein VF530 JJQ97_RS19240 PF01011 PQQ enzyme repeat JJQ97_RS19250 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ97_RS19250 PF07683 Cobalamin synthesis protein cobW C-terminal domain JJQ97_RS19270 PF07690 Major Facilitator Superfamily JJQ97_RS19275 PF01522 Polysaccharide deacetylase JJQ97_RS19280 PF01425 Amidase JJQ97_RS19285 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS19285 PF07702 UTRA domain JJQ97_RS19290 PF01152 Bacterial-like globin JJQ97_RS19300 PF00563 EAL domain JJQ97_RS19300 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS19300 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS19310 PF02190 ATP-dependent protease La (LON) substrate-binding domain JJQ97_RS19310 PF05362 Lon protease (S16) C-terminal proteolytic domain JJQ97_RS19310 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS19320 PF13649 Methyltransferase domain JJQ97_RS19325 PF08003 Protein of unknown function (DUF1698) JJQ97_RS19330 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JJQ97_RS19335 PF11967 Recombination protein O N terminal JJQ97_RS19335 PF02565 Recombination protein O C terminal JJQ97_RS19340 PF01926 50S ribosome-binding GTPase JJQ97_RS19340 PF07650 KH domain JJQ97_RS19345 PF14622 Ribonuclease-III-like JJQ97_RS19345 PF00035 Double-stranded RNA binding motif JJQ97_RS19355 PF10502 Signal peptidase, peptidase S26 JJQ97_RS19360 PF00009 Elongation factor Tu GTP binding domain JJQ97_RS19360 PF00679 Elongation factor G C-terminus JJQ97_RS19360 PF03144 Elongation factor Tu domain 2 JJQ97_RS19360 PF06421 GTP-binding protein LepA C-terminus JJQ97_RS19365 PF13180 PDZ domain JJQ97_RS19370 PF03888 MucB/RseB N-terminal domain JJQ97_RS19370 PF17188 MucB/RseB C-terminal domain JJQ97_RS19375 PF03872 Anti sigma-E protein RseA, N-terminal domain JJQ97_RS19375 PF03873 Anti sigma-E protein RseA, C-terminal domain JJQ97_RS19380 PF08281 Sigma-70, region 4 JJQ97_RS19380 PF04542 Sigma-70 region 2 JJQ97_RS19385 PF02910 Fumarate reductase flavoprotein C-term JJQ97_RS19385 PF00890 FAD binding domain JJQ97_RS19395 PF03937 Flavinator of succinate dehydrogenase JJQ97_RS19400 PF01571 Aminomethyltransferase folate-binding domain JJQ97_RS19410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS19410 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS19415 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS19415 PF00072 Response regulator receiver domain JJQ97_RS19430 PF01970 Tripartite tricarboxylate transporter TctA family JJQ97_RS19440 PF03167 Uracil DNA glycosylase superfamily JJQ97_RS19460 PF00005 ABC transporter JJQ97_RS19470 PF09347 Domain of unknown function (DUF1989) JJQ97_RS19475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ97_RS19475 PF02785 Biotin carboxylase C-terminal domain JJQ97_RS19475 PF00289 Biotin carboxylase, N-terminal domain JJQ97_RS19480 PF01425 Amidase JJQ97_RS19495 PF01479 S4 domain JJQ97_RS19495 PF00849 RNA pseudouridylate synthase JJQ97_RS19500 PF00561 alpha/beta hydrolase fold JJQ97_RS19515 PF00465 Iron-containing alcohol dehydrogenase JJQ97_RS19545 PF01915 Glycosyl hydrolase family 3 C-terminal domain JJQ97_RS19545 PF00933 Glycosyl hydrolase family 3 N terminal domain JJQ97_RS19545 PF14310 Fibronectin type III-like domain JJQ97_RS19550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS19550 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS19555 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS19555 PF00072 Response regulator receiver domain JJQ97_RS19555 PF00158 Sigma-54 interaction domain JJQ97_RS19560 PF13426 PAS domain JJQ97_RS19560 PF00072 Response regulator receiver domain JJQ97_RS19560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS19565 PF00012 Hsp70 protein JJQ97_RS19575 PF00083 Sugar (and other) transporter JJQ97_RS19605 PF07690 Major Facilitator Superfamily JJQ97_RS19615 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS19615 PF08361 MAATS-type transcriptional repressor, C-terminal region JJQ97_RS19620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS19620 PF00529 HlyD membrane-fusion protein of T1SS JJQ97_RS19625 PF00873 AcrB/AcrD/AcrF family JJQ97_RS19630 PF02321 Outer membrane efflux protein JJQ97_RS19640 PF00083 Sugar (and other) transporter JJQ97_RS19645 PF00108 Thiolase, N-terminal domain JJQ97_RS19645 PF02803 Thiolase, C-terminal domain JJQ97_RS19650 PF01144 Coenzyme A transferase JJQ97_RS19655 PF01144 Coenzyme A transferase JJQ97_RS19660 PF01614 Bacterial transcriptional regulator JJQ97_RS19660 PF09339 IclR helix-turn-helix domain JJQ97_RS19670 PF01384 Phosphate transporter family JJQ97_RS19680 PF00551 Formyl transferase JJQ97_RS19680 PF01842 ACT domain JJQ97_RS19690 PF08411 Exonuclease C-terminal JJQ97_RS19690 PF00929 Exonuclease JJQ97_RS19715 PF07726 ATPase family associated with various cellular activities (AAA) JJQ97_RS19715 PF17863 AAA lid domain JJQ97_RS19735 PF00224 Pyruvate kinase, barrel domain JJQ97_RS19735 PF02887 Pyruvate kinase, alpha/beta domain JJQ97_RS19740 PF00970 Oxidoreductase FAD-binding domain JJQ97_RS19740 PF00175 Oxidoreductase NAD-binding domain JJQ97_RS19745 PF05681 Fumarate hydratase (Fumerase) JJQ97_RS19745 PF05683 Fumarase C-terminus JJQ97_RS19750 PF05785 Rho-activating domain of cytotoxic necrotizing factor JJQ97_RS19750 PF18807 Tripartite Tc toxins repeat JJQ97_RS19755 PF14431 YwqJ-like deaminase JJQ97_RS19755 PF18807 Tripartite Tc toxins repeat JJQ97_RS19765 PF18413 Neuraminidase-like domain JJQ97_RS19765 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain JJQ97_RS19770 PF12255 Insecticide toxin TcdB middle/C-terminal region JJQ97_RS19770 PF03534 Salmonella virulence plasmid 65kDa B protein JJQ97_RS19770 PF12256 Insecticide toxin TcdB middle/N-terminal region JJQ97_RS19780 PF14431 YwqJ-like deaminase JJQ97_RS19780 PF18807 Tripartite Tc toxins repeat JJQ97_RS19785 PF18807 Tripartite Tc toxins repeat JJQ97_RS19785 PF14431 YwqJ-like deaminase JJQ97_RS19820 PF13396 Phospholipase_D-nuclease N-terminal JJQ97_RS19820 PF13091 PLD-like domain JJQ97_RS19860 PF07690 Major Facilitator Superfamily JJQ97_RS19865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ97_RS19885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS19885 PF03466 LysR substrate binding domain JJQ97_RS19890 PF01810 LysE type translocator JJQ97_RS19895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JJQ97_RS19895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JJQ97_RS19900 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS19900 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS19900 PF00563 EAL domain JJQ97_RS19960 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS19960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS19960 PF08521 Two-component sensor kinase N-terminal JJQ97_RS19965 PF00072 Response regulator receiver domain JJQ97_RS19965 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS19975 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS19975 PF01609 Transposase DDE domain JJQ97_RS19975 PF01609 Transposase DDE domain JJQ97_RS19975 PF13006 Insertion element 4 transposase N-terminal JJQ97_RS19980 PF00118 TCP-1/cpn60 chaperonin family JJQ97_RS19985 PF00166 Chaperonin 10 Kd subunit JJQ97_RS19990 PF04186 FxsA cytoplasmic membrane protein JJQ97_RS20005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JJQ97_RS20010 PF07690 Major Facilitator Superfamily JJQ97_RS20020 PF06715 Gp5 C-terminal repeat (3 copies) JJQ97_RS20020 PF04717 Type VI secretion system, phage-baseplate injector JJQ97_RS20075 PF00924 Mechanosensitive ion channel JJQ97_RS20075 PF05552 Conserved TM helix JJQ97_RS20080 PF04461 Protein of unknown function (DUF520) JJQ97_RS20085 PF02558 Ketopantoate reductase PanE/ApbA JJQ97_RS20085 PF08546 Ketopantoate reductase PanE/ApbA C terminal JJQ97_RS20090 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS20090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS20090 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS20095 PF01923 Cobalamin adenosyltransferase JJQ97_RS20100 PF00293 NUDIX domain JJQ97_RS20110 PF01960 ArgJ family JJQ97_RS20115 PF01043 SecA preprotein cross-linking domain JJQ97_RS20115 PF02810 SEC-C motif JJQ97_RS20115 PF07516 SecA Wing and Scaffold domain JJQ97_RS20115 PF07517 SecA DEAD-like domain JJQ97_RS20125 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JJQ97_RS20130 PF00091 Tubulin/FtsZ family, GTPase domain JJQ97_RS20130 PF12327 FtsZ family, C-terminal domain JJQ97_RS20135 PF02491 SHS2 domain inserted in FTSA JJQ97_RS20140 PF03799 Cell division protein FtsQ JJQ97_RS20140 PF08478 POTRA domain, FtsQ-type JJQ97_RS20145 PF07478 D-ala D-ala ligase C-terminus JJQ97_RS20145 PF01820 D-ala D-ala ligase N-terminus JJQ97_RS20150 PF08245 Mur ligase middle domain JJQ97_RS20150 PF01225 Mur ligase family, catalytic domain JJQ97_RS20150 PF02875 Mur ligase family, glutamate ligase domain JJQ97_RS20155 PF03033 Glycosyltransferase family 28 N-terminal domain JJQ97_RS20155 PF04101 Glycosyltransferase family 28 C-terminal domain JJQ97_RS20160 PF01098 Cell cycle protein JJQ97_RS20165 PF08245 Mur ligase middle domain JJQ97_RS20165 PF02875 Mur ligase family, glutamate ligase domain JJQ97_RS20170 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JJQ97_RS20170 PF00953 Glycosyl transferase family 4 JJQ97_RS20175 PF01225 Mur ligase family, catalytic domain JJQ97_RS20175 PF08245 Mur ligase middle domain JJQ97_RS20175 PF02875 Mur ligase family, glutamate ligase domain JJQ97_RS20180 PF08245 Mur ligase middle domain JJQ97_RS20180 PF01225 Mur ligase family, catalytic domain JJQ97_RS20180 PF02875 Mur ligase family, glutamate ligase domain JJQ97_RS20185 PF03717 Penicillin-binding Protein dimerisation domain JJQ97_RS20185 PF00905 Penicillin binding protein transpeptidase domain JJQ97_RS20190 PF04999 Cell division protein FtsL JJQ97_RS20195 PF01795 MraW methylase family JJQ97_RS20200 PF02381 MraZ protein, putative antitoxin-like JJQ97_RS20210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ97_RS20215 PF04348 LppC putative lipoprotein JJQ97_RS20220 PF02021 Uncharacterised protein family UPF0102 JJQ97_RS20225 PF13580 SIS domain JJQ97_RS20230 PF04972 BON domain JJQ97_RS20235 PF04386 Stringent starvation protein B JJQ97_RS20240 PF02798 Glutathione S-transferase, N-terminal domain JJQ97_RS20240 PF00043 Glutathione S-transferase, C-terminal domain JJQ97_RS20245 PF00380 Ribosomal protein S9/S16 JJQ97_RS20250 PF00572 Ribosomal protein L13 JJQ97_RS20260 PF03969 AFG1-like ATPase JJQ97_RS20265 PF00579 tRNA synthetases class I (W and Y) JJQ97_RS20280 PF00009 Elongation factor Tu GTP binding domain JJQ97_RS20285 PF01507 Phosphoadenosine phosphosulfate reductase family JJQ97_RS20290 PF01784 NIF3 (NGG1p interacting factor 3) JJQ97_RS20295 PF13180 PDZ domain JJQ97_RS20300 PF00155 Aminotransferase class I and II JJQ97_RS20305 PF00815 Histidinol dehydrogenase JJQ97_RS20310 PF01634 ATP phosphoribosyltransferase JJQ97_RS20315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JJQ97_RS20330 PF05494 MlaC protein JJQ97_RS20335 PF02470 MlaD protein JJQ97_RS20340 PF02405 Permease MlaE JJQ97_RS20345 PF00005 ABC transporter JJQ97_RS20350 PF00571 CBS domain JJQ97_RS20350 PF01380 SIS domain JJQ97_RS20365 PF03968 OstA-like protein JJQ97_RS20370 PF12399 Branched-chain amino acid ATP-binding cassette transporter JJQ97_RS20370 PF00005 ABC transporter JJQ97_RS20375 PF00309 Sigma-54 factor, Activator interacting domain (AID) JJQ97_RS20375 PF04963 Sigma-54 factor, core binding domain JJQ97_RS20375 PF04552 Sigma-54, DNA binding domain JJQ97_RS20380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JJQ97_RS20385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JJQ97_RS20390 PF03668 P-loop ATPase protein family JJQ97_RS20395 PF00381 PTS HPr component phosphorylation site JJQ97_RS20400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JJQ97_RS20400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JJQ97_RS20415 PF01523 Putative modulator of DNA gyrase JJQ97_RS20420 PF04751 Protein of unknown function (DUF615) JJQ97_RS20425 PF01523 Putative modulator of DNA gyrase JJQ97_RS20430 PF00795 Carbon-nitrogen hydrolase JJQ97_RS20440 PF00575 S1 RNA binding domain JJQ97_RS20440 PF10150 Ribonuclease E/G family JJQ97_RS20445 PF02545 Maf-like protein JJQ97_RS20455 PF04085 rod shape-determining protein MreC JJQ97_RS20465 PF02686 Glu-tRNAGln amidotransferase C subunit JJQ97_RS20470 PF01425 Amidase JJQ97_RS20475 PF02934 GatB/GatE catalytic domain JJQ97_RS20475 PF02637 GatB domain JJQ97_RS20480 PF03330 Lytic transglycolase JJQ97_RS20485 PF01699 Sodium/calcium exchanger protein JJQ97_RS20490 PF02627 Carboxymuconolactone decarboxylase family JJQ97_RS20500 PF16655 PhoD-like phosphatase, N-terminal domain JJQ97_RS20500 PF09423 PhoD-like phosphatase JJQ97_RS20505 PF10672 S-adenosylmethionine-dependent methyltransferase JJQ97_RS20505 PF17785 PUA-like domain JJQ97_RS20520 PF04972 BON domain JJQ97_RS20530 PF01138 3' exoribonuclease family, domain 1 JJQ97_RS20530 PF00575 S1 RNA binding domain JJQ97_RS20530 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JJQ97_RS20530 PF00013 KH domain JJQ97_RS20530 PF03725 3' exoribonuclease family, domain 2 JJQ97_RS20535 PF00312 Ribosomal protein S15 JJQ97_RS20540 PF01509 TruB family pseudouridylate synthase (N terminal domain) JJQ97_RS20540 PF16198 tRNA pseudouridylate synthase B C-terminal domain JJQ97_RS20540 PF09157 Pseudouridine synthase II TruB, C-terminal JJQ97_RS20545 PF02033 Ribosome-binding factor A JJQ97_RS20550 PF00009 Elongation factor Tu GTP binding domain JJQ97_RS20550 PF04760 Translation initiation factor IF-2, N-terminal region JJQ97_RS20550 PF11987 Translation-initiation factor 2 JJQ97_RS20550 PF08364 Bacterial translation initiation factor IF-2 associated region JJQ97_RS20555 PF00575 S1 RNA binding domain JJQ97_RS20555 PF13184 NusA-like KH domain JJQ97_RS20555 PF08529 NusA N-terminal domain JJQ97_RS20560 PF02576 RimP N-terminal domain JJQ97_RS20560 PF17384 RimP C-terminal SH3 domain JJQ97_RS20575 PF03840 Preprotein translocase SecG subunit JJQ97_RS20580 PF00121 Triosephosphate isomerase JJQ97_RS20585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JJQ97_RS20585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JJQ97_RS20585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JJQ97_RS20585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JJQ97_RS20590 PF00809 Pterin binding enzyme JJQ97_RS20595 PF06480 FtsH Extracellular JJQ97_RS20595 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS20595 PF17862 AAA+ lid domain JJQ97_RS20595 PF01434 Peptidase family M41 JJQ97_RS20600 PF01728 FtsJ-like methyltransferase JJQ97_RS20605 PF01985 CRS1 / YhbY (CRM) domain JJQ97_RS20610 PF01272 Transcription elongation factor, GreA/GreB, C-term JJQ97_RS20610 PF03449 Transcription elongation factor, N-terminal JJQ97_RS20615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ97_RS20615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JJQ97_RS20615 PF02142 MGS-like domain JJQ97_RS20620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JJQ97_RS20620 PF00117 Glutamine amidotransferase class-I JJQ97_RS20625 PF05173 Dihydrodipicolinate reductase, C-terminus JJQ97_RS20625 PF01113 Dihydrodipicolinate reductase, N-terminus JJQ97_RS20630 PF00684 DnaJ central domain JJQ97_RS20630 PF01556 DnaJ C terminal domain JJQ97_RS20630 PF00226 DnaJ domain JJQ97_RS20635 PF00012 Hsp70 protein JJQ97_RS20640 PF01025 GrpE JJQ97_RS20645 PF02463 RecF/RecN/SMC N terminal domain JJQ97_RS20650 PF01475 Ferric uptake regulator family JJQ97_RS20655 PF04355 SmpA / OmlA family JJQ97_RS20660 PF03658 RnfH family Ubiquitin JJQ97_RS20665 PF03364 Polyketide cyclase / dehydrase and lipid transport JJQ97_RS20670 PF00209 Sodium:neurotransmitter symporter family JJQ97_RS20675 PF01668 SmpB protein JJQ97_RS20725 PF02599 Global regulator protein family JJQ97_RS20755 PF18413 Neuraminidase-like domain JJQ97_RS20755 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain JJQ97_RS20760 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS20780 PF00141 Peroxidase JJQ97_RS20785 PF08447 PAS fold JJQ97_RS20790 PF06965 Na+/H+ antiporter 1 JJQ97_RS20795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS20800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS20800 PF00005 ABC transporter JJQ97_RS20805 PF00005 ABC transporter JJQ97_RS20805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS20810 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS20810 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ97_RS20815 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS20825 PF03472 Autoinducer binding domain JJQ97_RS20825 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS20830 PF00561 alpha/beta hydrolase fold JJQ97_RS20835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS20835 PF00672 HAMP domain JJQ97_RS20835 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS20850 PF00563 EAL domain JJQ97_RS20850 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS20850 PF08447 PAS fold JJQ97_RS20850 PF08448 PAS fold JJQ97_RS20855 PF01925 Sulfite exporter TauE/SafE JJQ97_RS20875 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JJQ97_RS20875 PF08666 SAF domain JJQ97_RS20880 PF07690 Major Facilitator Superfamily JJQ97_RS20885 PF00701 Dihydrodipicolinate synthetase family JJQ97_RS20890 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS20890 PF07729 FCD domain JJQ97_RS20895 PF00005 ABC transporter JJQ97_RS20895 PF06472 ABC transporter transmembrane region 2 JJQ97_RS20900 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS20900 PF00072 Response regulator receiver domain JJQ97_RS20905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS20905 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS20920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS20925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS20930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS20935 PF03573 outer membrane porin, OprD family JJQ97_RS20940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ97_RS20945 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS20950 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ97_RS20950 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS20955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS20955 PF00005 ABC transporter JJQ97_RS20960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ97_RS20960 PF00005 ABC transporter JJQ97_RS20965 PF00258 Flavodoxin JJQ97_RS20965 PF00667 FAD binding domain JJQ97_RS20965 PF00175 Oxidoreductase NAD-binding domain JJQ97_RS20985 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JJQ97_RS20985 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JJQ97_RS21000 PF00005 ABC transporter JJQ97_RS21000 PF00571 CBS domain JJQ97_RS21005 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS21010 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JJQ97_RS21015 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS21020 PF00009 Elongation factor Tu GTP binding domain JJQ97_RS21020 PF16658 Class II release factor RF3, C-terminal domain JJQ97_RS21020 PF03144 Elongation factor Tu domain 2 JJQ97_RS21025 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ97_RS21025 PF12804 MobA-like NTP transferase domain JJQ97_RS21030 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JJQ97_RS21030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ97_RS21040 PF03350 Uncharacterized protein family, UPF0114 JJQ97_RS21050 PF05362 Lon protease (S16) C-terminal proteolytic domain JJQ97_RS21050 PF13654 AAA domain JJQ97_RS21070 PF01272 Transcription elongation factor, GreA/GreB, C-term JJQ97_RS21070 PF03449 Transcription elongation factor, N-terminal JJQ97_RS21075 PF12848 ABC transporter JJQ97_RS21075 PF00005 ABC transporter JJQ97_RS21080 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS21080 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS21080 PF00563 EAL domain JJQ97_RS21085 PF00072 Response regulator receiver domain JJQ97_RS21085 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS21095 PF01425 Amidase JJQ97_RS21100 PF00464 Serine hydroxymethyltransferase JJQ97_RS21105 PF07683 Cobalamin synthesis protein cobW C-terminal domain JJQ97_RS21105 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ97_RS21110 PF04328 Selenoprotein, putative JJQ97_RS21115 PF02554 Carbon starvation protein CstA JJQ97_RS21115 PF13722 5TM C-terminal transporter carbon starvation CstA JJQ97_RS21120 PF07238 PilZ domain JJQ97_RS21125 PF18073 Rubredoxin metal binding domain JJQ97_RS21130 PF01741 Large-conductance mechanosensitive channel, MscL JJQ97_RS21135 PF00175 Oxidoreductase NAD-binding domain JJQ97_RS21135 PF00970 Oxidoreductase FAD-binding domain JJQ97_RS21140 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS21140 PF03472 Autoinducer binding domain JJQ97_RS21145 PF05175 Methyltransferase small domain JJQ97_RS21155 PF02322 Cytochrome bd terminal oxidase subunit II JJQ97_RS21160 PF01654 Cytochrome bd terminal oxidase subunit I JJQ97_RS21165 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JJQ97_RS21165 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JJQ97_RS21170 PF03450 CO dehydrogenase flavoprotein C-terminal domain JJQ97_RS21170 PF00941 FAD binding domain in molybdopterin dehydrogenase JJQ97_RS21175 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ97_RS21175 PF01799 [2Fe-2S] binding domain JJQ97_RS21180 PF00860 Permease family JJQ97_RS21185 PF05958 tRNA (Uracil-5-)-methyltransferase JJQ97_RS21205 PF07690 Major Facilitator Superfamily JJQ97_RS21210 PF04228 Putative neutral zinc metallopeptidase JJQ97_RS21230 PF13302 Acetyltransferase (GNAT) domain JJQ97_RS21235 PF00850 Histone deacetylase domain JJQ97_RS21245 PF00271 Helicase conserved C-terminal domain JJQ97_RS21245 PF00270 DEAD/DEAH box helicase JJQ97_RS21250 PF00892 EamA-like transporter family JJQ97_RS21255 PF13404 AsnC-type helix-turn-helix domain JJQ97_RS21255 PF01037 Lrp/AsnC ligand binding domain JJQ97_RS21260 PF00929 Exonuclease JJQ97_RS21260 PF04851 Type III restriction enzyme, res subunit JJQ97_RS21260 PF13307 Helicase C-terminal domain JJQ97_RS21270 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) JJQ97_RS21300 PF00271 Helicase conserved C-terminal domain JJQ97_RS21300 PF08482 ATP-dependent helicase C-terminal JJQ97_RS21300 PF00270 DEAD/DEAH box helicase JJQ97_RS21300 PF04408 Helicase associated domain (HA2) JJQ97_RS21305 PF07690 Major Facilitator Superfamily JJQ97_RS21310 PF00155 Aminotransferase class I and II JJQ97_RS21310 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS21320 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JJQ97_RS21330 PF07859 alpha/beta hydrolase fold JJQ97_RS21335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JJQ97_RS21345 PF01545 Cation efflux family JJQ97_RS21345 PF16916 Dimerisation domain of Zinc Transporter JJQ97_RS21360 PF13404 AsnC-type helix-turn-helix domain JJQ97_RS21360 PF01037 Lrp/AsnC ligand binding domain JJQ97_RS21365 PF00849 RNA pseudouridylate synthase JJQ97_RS21370 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JJQ97_RS21370 PF01048 Phosphorylase superfamily JJQ97_RS21375 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ97_RS21375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS21375 PF18158 Adaptive response protein AidB N-terminal domain JJQ97_RS21380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ97_RS21380 PF00672 HAMP domain JJQ97_RS21380 PF00072 Response regulator receiver domain JJQ97_RS21380 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS21380 PF01627 Hpt domain JJQ97_RS21380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS21385 PF08543 Phosphomethylpyrimidine kinase JJQ97_RS21390 PF02581 Thiamine monophosphate synthase JJQ97_RS21395 PF00202 Aminotransferase class-III JJQ97_RS21410 PF04055 Radical SAM superfamily JJQ97_RS21410 PF00919 Uncharacterized protein family UPF0004 JJQ97_RS21410 PF01938 TRAM domain JJQ97_RS21415 PF02562 PhoH-like protein JJQ97_RS21420 PF02130 Uncharacterized protein family UPF0054 JJQ97_RS21425 PF00571 CBS domain JJQ97_RS21425 PF03471 Transporter associated domain JJQ97_RS21430 PF00795 Carbon-nitrogen hydrolase JJQ97_RS21435 PF02698 DUF218 domain JJQ97_RS21445 PF00133 tRNA synthetases class I (I, L, M and V) JJQ97_RS21445 PF08264 Anticodon-binding domain of tRNA JJQ97_RS21445 PF13603 Leucyl-tRNA synthetase, Domain 2 JJQ97_RS21445 PF09334 tRNA synthetases class I (M) JJQ97_RS21465 PF13406 Transglycosylase SLT domain JJQ97_RS21470 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JJQ97_RS21470 PF04055 Radical SAM superfamily JJQ97_RS21475 PF03099 Biotin/lipoate A/B protein ligase family JJQ97_RS21480 PF04359 Protein of unknown function (DUF493) JJQ97_RS21485 PF07943 Penicillin-binding protein 5, C-terminal domain JJQ97_RS21485 PF00768 D-alanyl-D-alanine carboxypeptidase JJQ97_RS21490 PF03330 Lytic transglycolase JJQ97_RS21490 PF05036 Sporulation related domain JJQ97_RS21495 PF13406 Transglycosylase SLT domain JJQ97_RS21500 PF01098 Cell cycle protein JJQ97_RS21505 PF00905 Penicillin binding protein transpeptidase domain JJQ97_RS21505 PF03717 Penicillin-binding Protein dimerisation domain JJQ97_RS21510 PF02590 Predicted SPOUT methyltransferase JJQ97_RS21520 PF01467 Cytidylyltransferase-like JJQ97_RS21525 PF00171 Aldehyde dehydrogenase family JJQ97_RS21530 PF02245 Methylpurine-DNA glycosylase (MPG) JJQ97_RS21535 PF09335 SNARE associated Golgi protein JJQ97_RS21545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS21545 PF08447 PAS fold JJQ97_RS21545 PF08448 PAS fold JJQ97_RS21560 PF00072 Response regulator receiver domain JJQ97_RS21560 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS21565 PF00072 Response regulator receiver domain JJQ97_RS21565 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS21575 PF00293 NUDIX domain JJQ97_RS21580 PF01253 Translation initiation factor SUI1 JJQ97_RS21585 PF17944 Arginine decarboxylase C-terminal helical extension JJQ97_RS21585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JJQ97_RS21585 PF17810 Arginine decarboxylase helical bundle domain JJQ97_RS21590 PF04717 Type VI secretion system, phage-baseplate injector JJQ97_RS21600 PF01554 MatE JJQ97_RS21605 PF07678 A-macroglobulin TED domain JJQ97_RS21605 PF17962 Bacterial macroglobulin domain 6 JJQ97_RS21605 PF01835 MG2 domain JJQ97_RS21605 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JJQ97_RS21605 PF00207 Alpha-2-macroglobulin family JJQ97_RS21605 PF07703 Alpha-2-macroglobulin bait region domain JJQ97_RS21605 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JJQ97_RS21605 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JJQ97_RS21605 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JJQ97_RS21615 PF06832 Penicillin-Binding Protein C-terminus Family JJQ97_RS21615 PF00912 Transglycosylase JJQ97_RS21615 PF00905 Penicillin binding protein transpeptidase domain JJQ97_RS21620 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS21620 PF00072 Response regulator receiver domain JJQ97_RS21635 PF13629 Pilus formation protein N terminal region JJQ97_RS21635 PF04972 BON domain JJQ97_RS21635 PF00263 Bacterial type II and III secretion system protein JJQ97_RS21645 PF00437 Type II/IV secretion system protein JJQ97_RS21670 PF11412 Disulphide bond corrector protein DsbC JJQ97_RS21670 PF02683 Cytochrome C biogenesis protein transmembrane region JJQ97_RS21675 PF01220 Dehydroquinase class II JJQ97_RS21680 PF00364 Biotin-requiring enzyme JJQ97_RS21685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ97_RS21685 PF02785 Biotin carboxylase C-terminal domain JJQ97_RS21685 PF00289 Biotin carboxylase, N-terminal domain JJQ97_RS21700 PF01207 Dihydrouridine synthase (Dus) JJQ97_RS21705 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS21710 PF01808 AICARFT/IMPCHase bienzyme JJQ97_RS21710 PF02142 MGS-like domain JJQ97_RS21715 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JJQ97_RS21715 PF02843 Phosphoribosylglycinamide synthetase, C domain JJQ97_RS21715 PF02844 Phosphoribosylglycinamide synthetase, N domain JJQ97_RS21720 PF00672 HAMP domain JJQ97_RS21720 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS21720 PF00072 Response regulator receiver domain JJQ97_RS21720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ97_RS21720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS21720 PF01627 Hpt domain JJQ97_RS21725 PF01914 MarC family integral membrane protein JJQ97_RS21750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ97_RS21755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ97_RS21760 PF02570 Precorrin-8X methylmutase JJQ97_RS21765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JJQ97_RS21765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JJQ97_RS21770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ97_RS21775 PF01888 CbiD JJQ97_RS21780 PF02571 Precorrin-6x reductase CbiJ/CobK JJQ97_RS21800 PF13458 Periplasmic binding protein JJQ97_RS21805 PF02653 Branched-chain amino acid transport system / permease component JJQ97_RS21815 PF00005 ABC transporter JJQ97_RS21815 PF12399 Branched-chain amino acid ATP-binding cassette transporter JJQ97_RS21820 PF00005 ABC transporter JJQ97_RS21825 PF01774 UreD urease accessory protein JJQ97_RS21830 PF00547 Urease, gamma subunit JJQ97_RS21840 PF13673 Acetyltransferase (GNAT) domain JJQ97_RS21845 PF00699 Urease beta subunit JJQ97_RS21850 PF00449 Urease alpha-subunit, N-terminal domain JJQ97_RS21850 PF01979 Amidohydrolase family JJQ97_RS21865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS21865 PF00360 Phytochrome region JJQ97_RS21865 PF01590 GAF domain JJQ97_RS21865 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS21865 PF08446 PAS fold JJQ97_RS21870 PF01556 DnaJ C terminal domain JJQ97_RS21870 PF00226 DnaJ domain JJQ97_RS21875 PF00012 Hsp70 protein JJQ97_RS21885 PF07769 psiF repeat JJQ97_RS21890 PF00892 EamA-like transporter family JJQ97_RS21915 PF05170 AsmA family JJQ97_RS21920 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS21925 PF02814 UreE urease accessory protein, N-terminal domain JJQ97_RS21925 PF05194 UreE urease accessory protein, C-terminal domain JJQ97_RS21930 PF01730 UreF JJQ97_RS21935 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ97_RS21940 PF04955 HupE / UreJ protein JJQ97_RS21950 PF00925 GTP cyclohydrolase II JJQ97_RS21955 PF02769 AIR synthase related protein, C-terminal domain JJQ97_RS21955 PF00586 AIR synthase related protein, N-terminal domain JJQ97_RS21960 PF01029 NusB family JJQ97_RS21965 PF00885 6,7-dimethyl-8-ribityllumazine synthase JJQ97_RS21970 PF00925 GTP cyclohydrolase II JJQ97_RS21970 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JJQ97_RS21975 PF00677 Lumazine binding domain JJQ97_RS21980 PF01872 RibD C-terminal domain JJQ97_RS21980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JJQ97_RS21985 PF03477 ATP cone domain JJQ97_RS22000 PF00085 Thioredoxin JJQ97_RS22020 PF02687 FtsX-like permease family JJQ97_RS22020 PF00005 ABC transporter JJQ97_RS22020 PF12704 MacB-like periplasmic core domain JJQ97_RS22035 PF03922 OmpW family JJQ97_RS22040 PF01370 NAD dependent epimerase/dehydratase family JJQ97_RS22050 PF00924 Mechanosensitive ion channel JJQ97_RS22055 PF00561 alpha/beta hydrolase fold JJQ97_RS22060 PF01557 Fumarylacetoacetate (FAA) hydrolase family JJQ97_RS22065 PF03544 Gram-negative bacterial TonB protein C-terminal JJQ97_RS22070 PF01618 MotA/TolQ/ExbB proton channel family JJQ97_RS22075 PF02472 Biopolymer transport protein ExbD/TolR JJQ97_RS22115 PF00563 EAL domain JJQ97_RS22115 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS22115 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS22130 PF01618 MotA/TolQ/ExbB proton channel family JJQ97_RS22135 PF02472 Biopolymer transport protein ExbD/TolR JJQ97_RS22140 PF00593 TonB dependent receptor JJQ97_RS22140 PF07715 TonB-dependent Receptor Plug Domain JJQ97_RS22145 PF00328 Histidine phosphatase superfamily (branch 2) JJQ97_RS22150 PF00480 ROK family JJQ97_RS22155 PF13416 Bacterial extracellular solute-binding protein JJQ97_RS22165 PF08402 TOBE domain JJQ97_RS22165 PF00005 ABC transporter JJQ97_RS22170 PF03009 Glycerophosphoryl diester phosphodiesterase family JJQ97_RS22175 PF00459 Inositol monophosphatase family JJQ97_RS22180 PF00331 Glycosyl hydrolase family 10 JJQ97_RS22185 PF00436 Single-strand binding protein family JJQ97_RS22190 PF07690 Major Facilitator Superfamily JJQ97_RS22195 PF17760 UvrA interaction domain JJQ97_RS22195 PF17755 UvrA DNA-binding domain JJQ97_RS22200 PF00210 Ferritin-like domain JJQ97_RS22205 PF01196 Ribosomal protein L17 JJQ97_RS22210 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JJQ97_RS22210 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JJQ97_RS22210 PF01000 RNA polymerase Rpb3/RpoA insert domain JJQ97_RS22215 PF01479 S4 domain JJQ97_RS22215 PF00163 Ribosomal protein S4/S9 N-terminal domain JJQ97_RS22220 PF00411 Ribosomal protein S11 JJQ97_RS22225 PF00416 Ribosomal protein S13/S18 JJQ97_RS22230 PF00444 Ribosomal protein L36 JJQ97_RS22235 PF00344 SecY translocase JJQ97_RS22240 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JJQ97_RS22245 PF00327 Ribosomal protein L30p/L7e JJQ97_RS22250 PF00333 Ribosomal protein S5, N-terminal domain JJQ97_RS22250 PF03719 Ribosomal protein S5, C-terminal domain JJQ97_RS22255 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JJQ97_RS22260 PF00347 Ribosomal protein L6 JJQ97_RS22265 PF00410 Ribosomal protein S8 JJQ97_RS22270 PF00253 Ribosomal protein S14p/S29e JJQ97_RS22275 PF00281 Ribosomal protein L5 JJQ97_RS22275 PF00673 ribosomal L5P family C-terminus JJQ97_RS22280 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JJQ97_RS22280 PF00467 KOW motif JJQ97_RS22285 PF00238 Ribosomal protein L14p/L23e JJQ97_RS22290 PF00366 Ribosomal protein S17 JJQ97_RS22295 PF00831 Ribosomal L29 protein JJQ97_RS22300 PF00252 Ribosomal protein L16p/L10e JJQ97_RS22305 PF00189 Ribosomal protein S3, C-terminal domain JJQ97_RS22305 PF07650 KH domain JJQ97_RS22310 PF00237 Ribosomal protein L22p/L17e JJQ97_RS22315 PF00203 Ribosomal protein S19 JJQ97_RS22320 PF03947 Ribosomal Proteins L2, C-terminal domain JJQ97_RS22320 PF00181 Ribosomal Proteins L2, RNA binding domain JJQ97_RS22325 PF00276 Ribosomal protein L23 JJQ97_RS22330 PF00573 Ribosomal protein L4/L1 family JJQ97_RS22335 PF00297 Ribosomal protein L3 JJQ97_RS22340 PF00338 Ribosomal protein S10p/S20e JJQ97_RS22345 PF03143 Elongation factor Tu C-terminal domain JJQ97_RS22345 PF03144 Elongation factor Tu domain 2 JJQ97_RS22345 PF00009 Elongation factor Tu GTP binding domain JJQ97_RS22350 PF14492 Elongation Factor G, domain II JJQ97_RS22350 PF03144 Elongation factor Tu domain 2 JJQ97_RS22350 PF00009 Elongation factor Tu GTP binding domain JJQ97_RS22350 PF03764 Elongation factor G, domain IV JJQ97_RS22350 PF00679 Elongation factor G C-terminus JJQ97_RS22355 PF00177 Ribosomal protein S7p/S5e JJQ97_RS22360 PF00164 Ribosomal protein S12/S23 JJQ97_RS22365 PF05000 RNA polymerase Rpb1, domain 4 JJQ97_RS22365 PF04983 RNA polymerase Rpb1, domain 3 JJQ97_RS22365 PF00623 RNA polymerase Rpb1, domain 2 JJQ97_RS22365 PF04997 RNA polymerase Rpb1, domain 1 JJQ97_RS22365 PF04998 RNA polymerase Rpb1, domain 5 JJQ97_RS22370 PF00562 RNA polymerase Rpb2, domain 6 JJQ97_RS22370 PF10385 RNA polymerase beta subunit external 1 domain JJQ97_RS22370 PF04565 RNA polymerase Rpb2, domain 3 JJQ97_RS22370 PF04561 RNA polymerase Rpb2, domain 2 JJQ97_RS22370 PF04563 RNA polymerase beta subunit JJQ97_RS22370 PF04560 RNA polymerase Rpb2, domain 7 JJQ97_RS22375 PF00542 Ribosomal protein L7/L12 C-terminal domain JJQ97_RS22375 PF16320 Ribosomal protein L7/L12 dimerisation domain JJQ97_RS22380 PF00466 Ribosomal protein L10 JJQ97_RS22385 PF00687 Ribosomal protein L1p/L10e family JJQ97_RS22390 PF00298 Ribosomal protein L11, RNA binding domain JJQ97_RS22390 PF03946 Ribosomal protein L11, N-terminal domain JJQ97_RS22395 PF00467 KOW motif JJQ97_RS22395 PF02357 Transcription termination factor nusG JJQ97_RS22400 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JJQ97_RS22430 PF03309 Type III pantothenate kinase JJQ97_RS22435 PF08279 HTH domain JJQ97_RS22435 PF02237 Biotin protein ligase C terminal domain JJQ97_RS22435 PF03099 Biotin/lipoate A/B protein ligase family JJQ97_RS22465 PF00579 tRNA synthetases class I (W and Y) JJQ97_RS22465 PF01479 S4 domain JJQ97_RS22470 PF01551 Peptidase family M23 JJQ97_RS22470 PF04225 Opacity-associated protein A LysM-like domain JJQ97_RS22475 PF03702 Anhydro-N-acetylmuramic acid kinase JJQ97_RS22480 PF01521 Iron-sulphur cluster biosynthesis JJQ97_RS22485 PF02774 Semialdehyde dehydrogenase, dimerisation domain JJQ97_RS22485 PF01118 Semialdehyde dehydrogenase, NAD binding domain JJQ97_RS22490 PF03653 Uncharacterised protein family (UPF0093) JJQ97_RS22500 PF00106 short chain dehydrogenase JJQ97_RS22505 PF01230 HIT domain JJQ97_RS22510 PF03232 Ubiquinone biosynthesis protein COQ7 JJQ97_RS22515 PF02675 S-adenosylmethionine decarboxylase JJQ97_RS22520 PF02566 OsmC-like protein JJQ97_RS22525 PF13545 Crp-like helix-turn-helix domain JJQ97_RS22525 PF00027 Cyclic nucleotide-binding domain JJQ97_RS22535 PF00218 Indole-3-glycerol phosphate synthase JJQ97_RS22540 PF02885 Glycosyl transferase family, helical bundle domain JJQ97_RS22540 PF00591 Glycosyl transferase family, a/b domain JJQ97_RS22545 PF00117 Glutamine amidotransferase class-I JJQ97_RS22555 PF00182 Chitinase class I JJQ97_RS22575 PF04865 Baseplate J-like protein JJQ97_RS22580 PF07409 Phage protein GP46 JJQ97_RS22615 PF17482 Phage tail sheath C-terminal domain JJQ97_RS22615 PF04984 Phage tail sheath protein subtilisin-like domain JJQ97_RS22645 PF00717 Peptidase S24-like JJQ97_RS22645 PF01381 Helix-turn-helix JJQ97_RS22660 PF03797 Autotransporter beta-domain JJQ97_RS22660 PF00657 GDSL-like Lipase/Acylhydrolase JJQ97_RS22665 PF00425 chorismate binding enzyme JJQ97_RS22665 PF04715 Anthranilate synthase component I, N terminal region JJQ97_RS22670 PF13419 Haloacid dehalogenase-like hydrolase JJQ97_RS22675 PF00834 Ribulose-phosphate 3 epimerase family JJQ97_RS22680 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS22685 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS22695 PF08402 TOBE domain JJQ97_RS22695 PF00005 ABC transporter JJQ97_RS22700 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS22700 PF00072 Response regulator receiver domain JJQ97_RS22705 PF07730 Histidine kinase JJQ97_RS22705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS22705 PF05384 Sensor protein DegS JJQ97_RS22715 PF05099 Tellurite resistance protein TerB JJQ97_RS22715 PF00226 DnaJ domain JJQ97_RS22720 PF00483 Nucleotidyl transferase JJQ97_RS22725 PF01636 Phosphotransferase enzyme family JJQ97_RS22730 PF04453 LPS transport system D JJQ97_RS22730 PF03968 OstA-like protein JJQ97_RS22735 PF00639 PPIC-type PPIASE domain JJQ97_RS22735 PF09312 SurA N-terminal domain JJQ97_RS22740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JJQ97_RS22745 PF00398 Ribosomal RNA adenine dimethylase JJQ97_RS22750 PF04379 ApaG domain JJQ97_RS22755 PF00149 Calcineurin-like phosphoesterase JJQ97_RS22760 PF00581 Rhodanese-like domain JJQ97_RS22765 PF08298 PrkA AAA domain JJQ97_RS22765 PF06798 PrkA serine protein kinase C-terminal domain JJQ97_RS22770 PF04285 Protein of unknown function (DUF444) JJQ97_RS22775 PF04293 SpoVR like protein JJQ97_RS22780 PF01966 HD domain JJQ97_RS22780 PF12627 Probable RNA and SrmB- binding site of polymerase A JJQ97_RS22780 PF01743 Poly A polymerase head domain JJQ97_RS22785 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JJQ97_RS22790 PF02152 Dihydroneopterin aldolase JJQ97_RS22795 PF02660 Glycerol-3-phosphate acyltransferase JJQ97_RS22800 PF00814 Glycoprotease family JJQ97_RS22805 PF01165 Ribosomal protein S21 JJQ97_RS22810 PF10410 DnaB-helicase binding domain of primase JJQ97_RS22810 PF08278 DNA primase DnaG DnaB-binding JJQ97_RS22810 PF13662 Toprim domain JJQ97_RS22810 PF08275 DNA primase catalytic core, N-terminal domain JJQ97_RS22810 PF01807 CHC2 zinc finger JJQ97_RS22815 PF04542 Sigma-70 region 2 JJQ97_RS22815 PF04546 Sigma-70, non-essential region JJQ97_RS22815 PF04545 Sigma-70, region 4 JJQ97_RS22815 PF04539 Sigma-70 region 3 JJQ97_RS22815 PF03979 Sigma-70 factor, region 1.1 JJQ97_RS22815 PF00140 Sigma-70 factor, region 1.2 JJQ97_RS22820 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS22820 PF00563 EAL domain JJQ97_RS22820 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS22965 PF01625 Peptide methionine sulfoxide reductase JJQ97_RS22970 PF01226 Formate/nitrite transporter JJQ97_RS22985 PF00668 Condensation domain JJQ97_RS22985 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS22985 PF00550 Phosphopantetheine attachment site JJQ97_RS22985 PF00501 AMP-binding enzyme JJQ97_RS22985 PF00975 Thioesterase domain JJQ97_RS22995 PF02661 Fic/DOC family JJQ97_RS23015 PF01593 Flavin containing amine oxidoreductase JJQ97_RS23020 PF00795 Carbon-nitrogen hydrolase JJQ97_RS23025 PF05193 Peptidase M16 inactive domain JJQ97_RS23025 PF00675 Insulinase (Peptidase family M16) JJQ97_RS23030 PF08042 PqqA family JJQ97_RS23035 PF12706 Beta-lactamase superfamily domain JJQ97_RS23040 PF03070 TENA/THI-4/PQQC family JJQ97_RS23045 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JJQ97_RS23050 PF13186 Iron-sulfur cluster-binding domain JJQ97_RS23050 PF04055 Radical SAM superfamily JJQ97_RS23060 PF01679 Proteolipid membrane potential modulator JJQ97_RS23065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS23065 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ97_RS23065 PF12806 Acetyl-CoA dehydrogenase C-terminal like JJQ97_RS23065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS23070 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS23075 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ97_RS23075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS23075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS23075 PF12806 Acetyl-CoA dehydrogenase C-terminal like JJQ97_RS23090 PF08241 Methyltransferase domain JJQ97_RS23095 PF08241 Methyltransferase domain JJQ97_RS23095 PF12697 Alpha/beta hydrolase family JJQ97_RS23100 PF00155 Aminotransferase class I and II JJQ97_RS23105 PF06968 Biotin and Thiamin Synthesis associated domain JJQ97_RS23105 PF04055 Radical SAM superfamily JJQ97_RS23110 PF00156 Phosphoribosyl transferase domain JJQ97_RS23115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS23115 PF03459 TOBE domain JJQ97_RS23125 PF00149 Calcineurin-like phosphoesterase JJQ97_RS23130 PF00005 ABC transporter JJQ97_RS23130 PF08402 TOBE domain JJQ97_RS23135 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS23140 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS23150 PF00356 Bacterial regulatory proteins, lacI family JJQ97_RS23155 PF01636 Phosphotransferase enzyme family JJQ97_RS23160 PF00892 EamA-like transporter family JJQ97_RS23170 PF01274 Malate synthase JJQ97_RS23190 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS23190 PF00072 Response regulator receiver domain JJQ97_RS23200 PF00929 Exonuclease JJQ97_RS23215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS23215 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS23215 PF00672 HAMP domain JJQ97_RS23225 PF01965 DJ-1/PfpI family JJQ97_RS23225 PF12833 Helix-turn-helix domain JJQ97_RS23230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JJQ97_RS23235 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS23240 PF00005 ABC transporter JJQ97_RS23240 PF00571 CBS domain JJQ97_RS23245 PF00464 Serine hydroxymethyltransferase JJQ97_RS23250 PF01266 FAD dependent oxidoreductase JJQ97_RS23260 PF08669 Glycine cleavage T-protein C-terminal barrel domain JJQ97_RS23260 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS23260 PF17806 Sarcosine oxidase A3 domain JJQ97_RS23260 PF01571 Aminomethyltransferase folate-binding domain JJQ97_RS23265 PF04268 Sarcosine oxidase, gamma subunit family JJQ97_RS23270 PF00551 Formyl transferase JJQ97_RS23275 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS23275 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JJQ97_RS23305 PF01553 Acyltransferase JJQ97_RS23315 PF13417 Glutathione S-transferase, N-terminal domain JJQ97_RS23315 PF00043 Glutathione S-transferase, C-terminal domain JJQ97_RS23330 PF16220 Domain of unknown function (DUF4880) JJQ97_RS23330 PF04773 FecR protein JJQ97_RS23335 PF04542 Sigma-70 region 2 JJQ97_RS23335 PF08281 Sigma-70, region 4 JJQ97_RS23340 PF05199 GMC oxidoreductase JJQ97_RS23340 PF00732 GMC oxidoreductase JJQ97_RS23345 PF00171 Aldehyde dehydrogenase family JJQ97_RS23350 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS23350 PF13977 BetI-type transcriptional repressor, C-terminal JJQ97_RS23355 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JJQ97_RS23355 PF01926 50S ribosome-binding GTPase JJQ97_RS23365 PF00186 Dihydrofolate reductase JJQ97_RS23375 PF02390 Putative methyltransferase JJQ97_RS23380 PF05690 Thiazole biosynthesis protein ThiG JJQ97_RS23385 PF05690 Thiazole biosynthesis protein ThiG JJQ97_RS23385 PF02597 ThiS family JJQ97_RS23390 PF04241 Protein of unknown function (DUF423) JJQ97_RS23395 PF00912 Transglycosylase JJQ97_RS23400 PF04545 Sigma-70, region 4 JJQ97_RS23400 PF00140 Sigma-70 factor, region 1.2 JJQ97_RS23400 PF04542 Sigma-70 region 2 JJQ97_RS23405 PF18075 FtsX extracellular domain JJQ97_RS23410 PF00005 ABC transporter JJQ97_RS23415 PF02881 SRP54-type protein, helical bundle domain JJQ97_RS23415 PF00448 SRP54-type protein, GTPase domain JJQ97_RS23420 PF05193 Peptidase M16 inactive domain JJQ97_RS23420 PF00675 Insulinase (Peptidase family M16) JJQ97_RS23425 PF05193 Peptidase M16 inactive domain JJQ97_RS23435 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB JJQ97_RS23440 PF01381 Helix-turn-helix JJQ97_RS23445 PF00561 alpha/beta hydrolase fold JJQ97_RS23450 PF00581 Rhodanese-like domain JJQ97_RS23455 PF00440 Bacterial regulatory proteins, tetR family JJQ97_RS23460 PF01467 Cytidylyltransferase-like JJQ97_RS23465 PF00037 4Fe-4S binding domain JJQ97_RS23475 PF06827 Zinc finger found in FPG and IleRS JJQ97_RS23475 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JJQ97_RS23475 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JJQ97_RS23480 PF08668 HDOD domain JJQ97_RS23485 PF01965 DJ-1/PfpI family JJQ97_RS23490 PF10672 S-adenosylmethionine-dependent methyltransferase JJQ97_RS23490 PF17785 PUA-like domain JJQ97_RS23495 PF05857 TraX protein JJQ97_RS23500 PF01212 Beta-eliminating lyase JJQ97_RS23515 PF07690 Major Facilitator Superfamily JJQ97_RS23520 PF03707 Bacterial signalling protein N terminal repeat JJQ97_RS23520 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS23520 PF00563 EAL domain JJQ97_RS23525 PF01625 Peptide methionine sulfoxide reductase JJQ97_RS23530 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JJQ97_RS23550 PF00042 Globin JJQ97_RS23550 PF00175 Oxidoreductase NAD-binding domain JJQ97_RS23550 PF00970 Oxidoreductase FAD-binding domain JJQ97_RS23555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JJQ97_RS23555 PF00355 Rieske [2Fe-2S] domain JJQ97_RS23560 PF00704 Glycosyl hydrolases family 18 JJQ97_RS23575 PF00766 Electron transfer flavoprotein FAD-binding domain JJQ97_RS23575 PF01012 Electron transfer flavoprotein domain JJQ97_RS23580 PF13183 4Fe-4S dicluster domain JJQ97_RS23580 PF02665 Nitrate reductase gamma subunit JJQ97_RS23580 PF02754 Cysteine-rich domain JJQ97_RS23585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ97_RS23610 PF01116 Fructose-bisphosphate aldolase class-II JJQ97_RS23630 PF00162 Phosphoglycerate kinase JJQ97_RS23635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JJQ97_RS23635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JJQ97_RS23640 PF02779 Transketolase, pyrimidine binding domain JJQ97_RS23640 PF00456 Transketolase, thiamine diphosphate binding domain JJQ97_RS23640 PF02780 Transketolase, C-terminal domain JJQ97_RS23650 PF02773 S-adenosylmethionine synthetase, C-terminal domain JJQ97_RS23650 PF00438 S-adenosylmethionine synthetase, N-terminal domain JJQ97_RS23650 PF02772 S-adenosylmethionine synthetase, central domain JJQ97_RS23655 PF01810 LysE type translocator JJQ97_RS23660 PF01653 NAD-dependent DNA ligase adenylation domain JJQ97_RS23660 PF03120 NAD-dependent DNA ligase OB-fold domain JJQ97_RS23675 PF00672 HAMP domain JJQ97_RS23675 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS23675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS23680 PF00072 Response regulator receiver domain JJQ97_RS23680 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS23685 PF02321 Outer membrane efflux protein JJQ97_RS23690 PF00529 HlyD membrane-fusion protein of T1SS JJQ97_RS23690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ97_RS23695 PF00873 AcrB/AcrD/AcrF family JJQ97_RS23745 PF00999 Sodium/hydrogen exchanger family JJQ97_RS23750 PF12833 Helix-turn-helix domain JJQ97_RS23765 PF00455 DeoR C terminal sensor domain JJQ97_RS23765 PF08220 DeoR-like helix-turn-helix domain JJQ97_RS23770 PF03144 Elongation factor Tu domain 2 JJQ97_RS23770 PF00679 Elongation factor G C-terminus JJQ97_RS23770 PF00009 Elongation factor Tu GTP binding domain JJQ97_RS23775 PF02926 THUMP domain JJQ97_RS23775 PF02568 Thiamine biosynthesis protein (ThiI) JJQ97_RS23780 PF00120 Glutamine synthetase, catalytic domain JJQ97_RS23780 PF03951 Glutamine synthetase, beta-Grasp domain JJQ97_RS23785 PF00571 CBS domain JJQ97_RS23785 PF00291 Pyridoxal-phosphate dependent enzyme JJQ97_RS23795 PF02843 Phosphoribosylglycinamide synthetase, C domain JJQ97_RS23795 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JJQ97_RS23795 PF02844 Phosphoribosylglycinamide synthetase, N domain JJQ97_RS23805 PF02666 Phosphatidylserine decarboxylase JJQ97_RS23810 PF01817 Chorismate mutase type II JJQ97_RS23825 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS23825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS23825 PF00989 PAS fold JJQ97_RS23830 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS23830 PF00072 Response regulator receiver domain JJQ97_RS23830 PF00158 Sigma-54 interaction domain JJQ97_RS23835 PF01425 Amidase JJQ97_RS23840 PF00248 Aldo/keto reductase family JJQ97_RS23845 PF09084 NMT1/THI5 like JJQ97_RS23850 PF00296 Luciferase-like monooxygenase JJQ97_RS23855 PF02028 BCCT, betaine/carnitine/choline family transporter JJQ97_RS23860 PF01175 Urocanase Rossmann-like domain JJQ97_RS23860 PF17391 Urocanase N-terminal domain JJQ97_RS23860 PF17392 Urocanase C-terminal domain JJQ97_RS23870 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS23875 PF00571 CBS domain JJQ97_RS23875 PF00005 ABC transporter JJQ97_RS23880 PF00221 Aromatic amino acid lyase JJQ97_RS23885 PF00221 Aromatic amino acid lyase JJQ97_RS23890 PF00324 Amino acid permease JJQ97_RS23895 PF01979 Amidohydrolase family JJQ97_RS23905 PF00403 Heavy-metal-associated domain JJQ97_RS23910 PF13411 MerR HTH family regulatory protein JJQ97_RS23915 PF00303 Thymidylate synthase JJQ97_RS23920 PF01790 Prolipoprotein diacylglyceryl transferase JJQ97_RS23925 PF02896 PEP-utilising enzyme, TIM barrel domain JJQ97_RS23925 PF00391 PEP-utilising enzyme, mobile domain JJQ97_RS23925 PF05524 PEP-utilising enzyme, N-terminal JJQ97_RS23925 PF01590 GAF domain JJQ97_RS23930 PF00293 NUDIX domain JJQ97_RS23945 PF00291 Pyridoxal-phosphate dependent enzyme JJQ97_RS23945 PF00585 C-terminal regulatory domain of Threonine dehydratase JJQ97_RS23950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JJQ97_RS23955 PF06977 SdiA-regulated JJQ97_RS23965 PF01557 Fumarylacetoacetate (FAA) hydrolase family JJQ97_RS23970 PF02913 FAD linked oxidases, C-terminal domain JJQ97_RS23970 PF01565 FAD binding domain JJQ97_RS23975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ97_RS23975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ97_RS23975 PF01842 ACT domain JJQ97_RS24000 PF01804 Penicillin amidase JJQ97_RS24005 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS24010 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS24015 PF00005 ABC transporter JJQ97_RS24015 PF08402 TOBE domain JJQ97_RS24020 PF13416 Bacterial extracellular solute-binding protein JJQ97_RS24025 PF13416 Bacterial extracellular solute-binding protein JJQ97_RS24030 PF00202 Aminotransferase class-III JJQ97_RS24035 PF00120 Glutamine synthetase, catalytic domain JJQ97_RS24040 PF00120 Glutamine synthetase, catalytic domain JJQ97_RS24065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS24065 PF03459 TOBE domain JJQ97_RS24070 PF00005 ABC transporter JJQ97_RS24075 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS24080 PF09084 NMT1/THI5 like JJQ97_RS24085 PF10417 C-terminal domain of 1-Cys peroxiredoxin JJQ97_RS24085 PF00578 AhpC/TSA family JJQ97_RS24090 PF03573 outer membrane porin, OprD family JJQ97_RS24100 PF00588 SpoU rRNA Methylase family JJQ97_RS24105 PF02556 Preprotein translocase subunit SecB JJQ97_RS24110 PF00462 Glutaredoxin JJQ97_RS24115 PF00581 Rhodanese-like domain JJQ97_RS24120 PF01676 Metalloenzyme superfamily JJQ97_RS24120 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JJQ97_RS24125 PF01551 Peptidase family M23 JJQ97_RS24130 PF03572 Peptidase family S41 JJQ97_RS24130 PF13180 PDZ domain JJQ97_RS24135 PF04748 Divergent polysaccharide deacetylase JJQ97_RS24155 PF00977 Histidine biosynthesis protein JJQ97_RS24160 PF00977 Histidine biosynthesis protein JJQ97_RS24170 PF00117 Glutamine amidotransferase class-I JJQ97_RS24175 PF00475 Imidazoleglycerol-phosphate dehydratase JJQ97_RS24180 PF00155 Aminotransferase class I and II JJQ97_RS24185 PF07690 Major Facilitator Superfamily JJQ97_RS24195 PF00633 Helix-hairpin-helix motif JJQ97_RS24195 PF14815 NUDIX domain JJQ97_RS24195 PF00730 HhH-GPD superfamily base excision DNA repair protein JJQ97_RS24195 PF10576 Iron-sulfur binding domain of endonuclease III JJQ97_RS24200 PF04362 Bacterial Fe(2+) trafficking JJQ97_RS24230 PF13426 PAS domain JJQ97_RS24230 PF08447 PAS fold JJQ97_RS24230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS24240 PF00324 Amino acid permease JJQ97_RS24245 PF00005 ABC transporter JJQ97_RS24250 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ97_RS24255 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS24260 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS24275 PF00684 DnaJ central domain JJQ97_RS24275 PF01556 DnaJ C terminal domain JJQ97_RS24275 PF00226 DnaJ domain JJQ97_RS24300 PF05973 Phage derived protein Gp49-like (DUF891) JJQ97_RS24330 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JJQ97_RS24335 PF04221 RelB antitoxin JJQ97_RS24360 PF03573 outer membrane porin, OprD family JJQ97_RS24370 PF04371 Porphyromonas-type peptidyl-arginine deiminase JJQ97_RS24375 PF00795 Carbon-nitrogen hydrolase JJQ97_RS24380 PF00202 Aminotransferase class-III JJQ97_RS24385 PF16363 GDP-mannose 4,6 dehydratase JJQ97_RS24390 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JJQ97_RS24395 PF02743 Cache domain JJQ97_RS24395 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS24395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS24400 PF00158 Sigma-54 interaction domain JJQ97_RS24400 PF00072 Response regulator receiver domain JJQ97_RS24400 PF02954 Bacterial regulatory protein, Fis family JJQ97_RS24410 PF00459 Inositol monophosphatase family JJQ97_RS24415 PF00293 NUDIX domain JJQ97_RS24420 PF13419 Haloacid dehalogenase-like hydrolase JJQ97_RS24425 PF04972 BON domain JJQ97_RS24425 PF01476 LysM domain JJQ97_RS24430 PF03466 LysR substrate binding domain JJQ97_RS24430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS24435 PF02634 FdhD/NarQ family JJQ97_RS24440 PF00384 Molybdopterin oxidoreductase JJQ97_RS24475 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JJQ97_RS24485 PF05947 Type VI secretion system, TssF JJQ97_RS24495 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ97_RS24495 PF17871 AAA lid domain JJQ97_RS24495 PF07724 AAA domain (Cdc48 subfamily) JJQ97_RS24495 PF00004 ATPase family associated with various cellular activities (AAA) JJQ97_RS24505 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JJQ97_RS24515 PF06761 Intracellular multiplication and human macrophage-killing JJQ97_RS24515 PF06744 Type VI secretion protein IcmF C-terminal JJQ97_RS24515 PF14331 ImcF-related N-terminal domain JJQ97_RS24525 PF00691 OmpA family JJQ97_RS24525 PF01389 OmpA-like transmembrane domain JJQ97_RS24555 PF13091 PLD-like domain JJQ97_RS24555 PF13396 Phospholipase_D-nuclease N-terminal JJQ97_RS24575 PF06715 Gp5 C-terminal repeat (3 copies) JJQ97_RS24575 PF04717 Type VI secretion system, phage-baseplate injector JJQ97_RS24585 PF13291 ACT domain JJQ97_RS24585 PF04607 Region found in RelA / SpoT proteins JJQ97_RS24585 PF02824 TGS domain JJQ97_RS24595 PF18660 Tsi6 JJQ97_RS24615 PF18660 Tsi6 JJQ97_RS24620 PF01129 NAD:arginine ADP-ribosyltransferase JJQ97_RS24625 PF06715 Gp5 C-terminal repeat (3 copies) JJQ97_RS24625 PF04717 Type VI secretion system, phage-baseplate injector JJQ97_RS24640 PF03527 RHS protein JJQ97_RS24640 PF05593 RHS Repeat JJQ97_RS24650 PF03527 RHS protein JJQ97_RS24650 PF05593 RHS Repeat JJQ97_RS24715 PF00550 Phosphopantetheine attachment site JJQ97_RS24720 PF05552 Conserved TM helix JJQ97_RS24720 PF00924 Mechanosensitive ion channel JJQ97_RS24725 PF13426 PAS domain JJQ97_RS24725 PF08447 PAS fold JJQ97_RS24725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS24735 PF13419 Haloacid dehalogenase-like hydrolase JJQ97_RS24740 PF00248 Aldo/keto reductase family JJQ97_RS24745 PF07729 FCD domain JJQ97_RS24745 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS24760 PF00501 AMP-binding enzyme JJQ97_RS24760 PF13193 AMP-binding enzyme C-terminal domain JJQ97_RS24760 PF00668 Condensation domain JJQ97_RS24760 PF00550 Phosphopantetheine attachment site JJQ97_RS24760 PF00975 Thioesterase domain JJQ97_RS24800 PF02515 CoA-transferase family III JJQ97_RS24805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ97_RS24805 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ97_RS24805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ97_RS24810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS24810 PF03466 LysR substrate binding domain JJQ97_RS24815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JJQ97_RS24815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JJQ97_RS24820 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JJQ97_RS24825 PF02233 NAD(P) transhydrogenase beta subunit JJQ97_RS24830 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JJQ97_RS24830 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JJQ97_RS24870 PF00216 Bacterial DNA-binding protein JJQ97_RS24875 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ97_RS24875 PF18113 Rubredoxin binding C-terminal domain JJQ97_RS24880 PF00301 Rubredoxin JJQ97_RS24885 PF04345 Chorismate lyase JJQ97_RS24890 PF01040 UbiA prenyltransferase family JJQ97_RS24895 PF00486 Transcriptional regulatory protein, C terminal JJQ97_RS24895 PF00072 Response regulator receiver domain JJQ97_RS24900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS24900 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS24900 PF11808 Phosphate regulon sensor protein PhoR JJQ97_RS24900 PF00989 PAS fold JJQ97_RS24905 PF03471 Transporter associated domain JJQ97_RS24905 PF00571 CBS domain JJQ97_RS24905 PF01595 Cyclin M transmembrane N-terminal domain JJQ97_RS24910 PF01551 Peptidase family M23 JJQ97_RS24910 PF08525 Opacity-associated protein A N-terminal motif JJQ97_RS24910 PF01476 LysM domain JJQ97_RS24920 PF00072 Response regulator receiver domain JJQ97_RS24925 PF01895 PhoU domain JJQ97_RS24930 PF00005 ABC transporter JJQ97_RS24935 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS24940 PF00528 Binding-protein-dependent transport system inner membrane component JJQ97_RS24945 PF12849 PBP superfamily domain JJQ97_RS24950 PF07690 Major Facilitator Superfamily JJQ97_RS24955 PF03061 Thioesterase superfamily JJQ97_RS24975 PF02222 ATP-grasp domain JJQ97_RS24975 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JJQ97_RS24980 PF00731 AIR carboxylase JJQ97_RS24990 PF03466 LysR substrate binding domain JJQ97_RS24990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS24995 PF10415 Fumarase C C-terminus JJQ97_RS24995 PF00206 Lyase JJQ97_RS25000 PF01235 Sodium:alanine symporter family JJQ97_RS25005 PF17763 Glutaminase/Asparaginase C-terminal domain JJQ97_RS25005 PF00710 Asparaginase, N-terminal JJQ97_RS25010 PF01062 Bestrophin, RFP-TM, chloride channel JJQ97_RS25015 PF04143 Sulphur transport JJQ97_RS25020 PF00392 Bacterial regulatory proteins, gntR family JJQ97_RS25020 PF00155 Aminotransferase class I and II JJQ97_RS25040 PF00364 Biotin-requiring enzyme JJQ97_RS25040 PF00682 HMGL-like JJQ97_RS25040 PF02436 Conserved carboxylase domain JJQ97_RS25045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ97_RS25045 PF00289 Biotin carboxylase, N-terminal domain JJQ97_RS25045 PF02785 Biotin carboxylase C-terminal domain JJQ97_RS25050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS25050 PF03466 LysR substrate binding domain JJQ97_RS25065 PF01380 SIS domain JJQ97_RS25065 PF01418 Helix-turn-helix domain, rpiR family JJQ97_RS25070 PF13361 UvrD-like helicase C-terminal domain JJQ97_RS25070 PF00580 UvrD/REP helicase N-terminal domain JJQ97_RS25085 PF02254 TrkA-N domain JJQ97_RS25085 PF00999 Sodium/hydrogen exchanger family JJQ97_RS25090 PF03061 Thioesterase superfamily JJQ97_RS25095 PF08543 Phosphomethylpyrimidine kinase JJQ97_RS25105 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ97_RS25105 PF07683 Cobalamin synthesis protein cobW C-terminal domain JJQ97_RS25120 PF07683 Cobalamin synthesis protein cobW C-terminal domain JJQ97_RS25120 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ97_RS25130 PF01520 N-acetylmuramoyl-L-alanine amidase JJQ97_RS25135 PF12276 Protein of unknown function (DUF3617) JJQ97_RS25140 PF13396 Phospholipase_D-nuclease N-terminal JJQ97_RS25140 PF13091 PLD-like domain JJQ97_RS25175 PF04349 Periplasmic glucan biosynthesis protein, MdoG JJQ97_RS25185 PF01757 Acyltransferase family JJQ97_RS25190 PF00196 Bacterial regulatory proteins, luxR family JJQ97_RS25190 PF00072 Response regulator receiver domain JJQ97_RS25195 PF00512 His Kinase A (phospho-acceptor) domain JJQ97_RS25195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS25195 PF13493 Domain of unknown function (DUF4118) JJQ97_RS25195 PF13426 PAS domain JJQ97_RS25195 PF08447 PAS fold JJQ97_RS25195 PF00989 PAS fold JJQ97_RS25200 PF00005 ABC transporter JJQ97_RS25210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS25210 PF16591 Helical bimodular sensor domain JJQ97_RS25210 PF00672 HAMP domain JJQ97_RS25215 PF00672 HAMP domain JJQ97_RS25215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS25225 PF05067 Manganese containing catalase JJQ97_RS25245 PF17827 PrmC N-terminal domain JJQ97_RS25245 PF05175 Methyltransferase small domain JJQ97_RS25250 PF06715 Gp5 C-terminal repeat (3 copies) JJQ97_RS25250 PF04717 Type VI secretion system, phage-baseplate injector JJQ97_RS25275 PF00005 ABC transporter JJQ97_RS25285 PF01032 FecCD transport family JJQ97_RS25290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JJQ97_RS25290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JJQ97_RS25290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JJQ97_RS25295 PF01370 NAD dependent epimerase/dehydratase family JJQ97_RS25300 PF00535 Glycosyl transferase family 2 JJQ97_RS25305 PF07578 Lipid A Biosynthesis N-terminal domain JJQ97_RS25305 PF02684 Lipid-A-disaccharide synthetase JJQ97_RS25310 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JJQ97_RS25315 PF06977 SdiA-regulated JJQ97_RS25330 PF03358 NADPH-dependent FMN reductase JJQ97_RS25340 PF01022 Bacterial regulatory protein, arsR family JJQ97_RS25345 PF12729 Four helix bundle sensory module for signal transduction JJQ97_RS25345 PF00672 HAMP domain JJQ97_RS25345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS25350 PF00719 Inorganic pyrophosphatase JJQ97_RS25360 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JJQ97_RS25370 PF01380 SIS domain JJQ97_RS25375 PF00455 DeoR C terminal sensor domain JJQ97_RS25375 PF08220 DeoR-like helix-turn-helix domain JJQ97_RS25380 PF12804 MobA-like NTP transferase domain JJQ97_RS25380 PF14602 Hexapeptide repeat of succinyl-transferase JJQ97_RS25380 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ97_RS25385 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JJQ97_RS25385 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JJQ97_RS25390 PF02874 ATP synthase alpha/beta family, beta-barrel domain JJQ97_RS25390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJQ97_RS25395 PF00231 ATP synthase JJQ97_RS25400 PF02874 ATP synthase alpha/beta family, beta-barrel domain JJQ97_RS25400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJQ97_RS25400 PF00306 ATP synthase alpha/beta chain, C terminal domain JJQ97_RS25405 PF00213 ATP synthase delta (OSCP) subunit JJQ97_RS25410 PF00430 ATP synthase B/B' CF(0) JJQ97_RS25415 PF00137 ATP synthase subunit C JJQ97_RS25420 PF00119 ATP synthase A chain JJQ97_RS25425 PF03899 ATP synthase I chain JJQ97_RS25430 PF02195 ParB-like nuclease domain JJQ97_RS25430 PF17762 HTH domain found in ParB protein JJQ97_RS25435 PF13614 AAA domain JJQ97_RS25440 PF02527 rRNA small subunit methyltransferase G JJQ97_RS25445 PF01134 Glucose inhibited division protein A JJQ97_RS25445 PF13932 GidA associated domain JJQ97_RS25450 PF10396 GTP-binding protein TrmE N-terminus JJQ97_RS25450 PF12631 MnmE helical domain JJQ97_RS25450 PF01926 50S ribosome-binding GTPase JJQ97_RS25455 PF14849 YidC periplasmic domain JJQ97_RS25455 PF02096 60Kd inner membrane protein JJQ97_RS25460 PF01809 Putative membrane protein insertion efficiency factor JJQ97_RS25465 PF00825 Ribonuclease P JJQ97_RS25470 PF00468 Ribosomal protein L34 JJQ97_RS25475 PF08299 Bacterial dnaA protein helix-turn-helix JJQ97_RS25475 PF00308 Bacterial dnaA protein JJQ97_RS25475 PF11638 DnaA N-terminal domain JJQ97_RS25480 PF02767 DNA polymerase III beta subunit, central domain JJQ97_RS25480 PF02768 DNA polymerase III beta subunit, C-terminal domain JJQ97_RS25480 PF00712 DNA polymerase III beta subunit, N-terminal domain JJQ97_RS25485 PF02463 RecF/RecN/SMC N terminal domain JJQ97_RS25490 PF00204 DNA gyrase B JJQ97_RS25490 PF00986 DNA gyrase B subunit, carboxyl terminus JJQ97_RS25490 PF18053 DNA gyrase B subunit insert domain JJQ97_RS25490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS25490 PF01751 Toprim domain JJQ97_RS25495 PF02463 RecF/RecN/SMC N terminal domain JJQ97_RS25525 PF02092 Glycyl-tRNA synthetase beta subunit JJQ97_RS25525 PF05746 DALR anticodon binding domain JJQ97_RS25530 PF02091 Glycyl-tRNA synthetase alpha subunit JJQ97_RS25535 PF03352 Methyladenine glycosylase JJQ97_RS25545 PF00384 Molybdopterin oxidoreductase JJQ97_RS25550 PF02080 TrkA-C domain JJQ97_RS25550 PF02254 TrkA-N domain JJQ97_RS25555 PF01029 NusB family JJQ97_RS25555 PF01189 16S rRNA methyltransferase RsmB/F JJQ97_RS25560 PF02911 Formyl transferase, C-terminal domain JJQ97_RS25560 PF00551 Formyl transferase JJQ97_RS25565 PF01327 Polypeptide deformylase JJQ97_RS25575 PF02481 DNA recombination-mediator protein A JJQ97_RS25575 PF17782 DprA winged helix domain JJQ97_RS25580 PF01300 Telomere recombination JJQ97_RS25585 PF08240 Alcohol dehydrogenase GroES-like domain JJQ97_RS25585 PF00107 Zinc-binding dehydrogenase JJQ97_RS25590 PF01218 Coproporphyrinogen III oxidase JJQ97_RS25595 PF08501 Shikimate dehydrogenase substrate binding domain JJQ97_RS25595 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JJQ97_RS25595 PF01488 Shikimate / quinate 5-dehydrogenase JJQ97_RS25600 PF01740 STAS domain JJQ97_RS25600 PF00916 Sulfate permease family JJQ97_RS25605 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JJQ97_RS25610 PF00884 Sulfatase JJQ97_RS25610 PF12411 Choline sulfatase enzyme C terminal JJQ97_RS25615 PF03466 LysR substrate binding domain JJQ97_RS25615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS25620 PF00561 alpha/beta hydrolase fold JJQ97_RS25630 PF00290 Tryptophan synthase alpha chain JJQ97_RS25635 PF00291 Pyridoxal-phosphate dependent enzyme JJQ97_RS25640 PF03466 LysR substrate binding domain JJQ97_RS25640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS25650 PF07311 Dodecin JJQ97_RS25660 PF00296 Luciferase-like monooxygenase JJQ97_RS25665 PF02566 OsmC-like protein JJQ97_RS25685 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ97_RS25690 PF01432 Peptidase family M3 JJQ97_RS25695 PF09526 Probable metal-binding protein (DUF2387) JJQ97_RS25710 PF03239 Iron permease FTR1 family JJQ97_RS25715 PF01810 LysE type translocator JJQ97_RS25725 PF00005 ABC transporter JJQ97_RS25725 PF12848 ABC transporter JJQ97_RS25740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ97_RS25740 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JJQ97_RS25745 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JJQ97_RS25750 PF02600 Disulfide bond formation protein DsbB JJQ97_RS25765 PF02602 Uroporphyrinogen-III synthase HemD JJQ97_RS25770 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JJQ97_RS25770 PF03900 Porphobilinogen deaminase, C-terminal domain JJQ97_RS25775 PF00072 Response regulator receiver domain JJQ97_RS25775 PF04397 LytTr DNA-binding domain JJQ97_RS25780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ97_RS25780 PF06580 Histidine kinase JJQ97_RS25785 PF00206 Lyase JJQ97_RS25785 PF14698 Argininosuccinate lyase C-terminal JJQ97_RS25790 PF07670 Nucleoside recognition JJQ97_RS25800 PF00675 Insulinase (Peptidase family M16) JJQ97_RS25800 PF05193 Peptidase M16 inactive domain JJQ97_RS25805 PF02690 Na+/Pi-cotransporter JJQ97_RS25810 PF00672 HAMP domain JJQ97_RS25810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ97_RS25815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ97_RS25815 PF03466 LysR substrate binding domain JJQ97_RS25820 PF01554 MatE JJQ97_RS25825 PF00563 EAL domain JJQ97_RS25825 PF00990 Diguanylate cyclase, GGDEF domain JJQ97_RS25825 PF03707 Bacterial signalling protein N terminal repeat