locus-tag class description DA456_RS00010 PF01047 MarR family DA456_RS00025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS00025 PF08447 PAS fold DA456_RS00030 PF03797 Autotransporter beta-domain DA456_RS00030 PF00082 Subtilase family DA456_RS00030 PF12951 Passenger-associated-transport-repeat DA456_RS00035 PF12951 Passenger-associated-transport-repeat DA456_RS00035 PF03797 Autotransporter beta-domain DA456_RS00035 PF00082 Subtilase family DA456_RS00085 PF12102 Domain of unknown function (DUF3578) DA456_RS00085 PF07728 AAA domain (dynein-related subfamily) DA456_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS00095 PF08521 Two-component sensor kinase N-terminal DA456_RS00095 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS00100 PF00486 Transcriptional regulatory protein, C terminal DA456_RS00100 PF00072 Response regulator receiver domain DA456_RS00110 PF07690 Major Facilitator Superfamily DA456_RS00115 PF00440 Bacterial regulatory proteins, tetR family DA456_RS00125 PF00501 AMP-binding enzyme DA456_RS00125 PF00550 Phosphopantetheine attachment site DA456_RS00125 PF00668 Condensation domain DA456_RS00125 PF13193 AMP-binding enzyme C-terminal domain DA456_RS00125 PF00975 Thioesterase domain DA456_RS00130 PF00268 Ribonucleotide reductase, small chain DA456_RS00135 PF02867 Ribonucleotide reductase, barrel domain DA456_RS00135 PF00317 Ribonucleotide reductase, all-alpha domain DA456_RS00135 PF03477 ATP cone domain DA456_RS00140 PF00486 Transcriptional regulatory protein, C terminal DA456_RS00140 PF00072 Response regulator receiver domain DA456_RS00145 PF00672 HAMP domain DA456_RS00145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS00145 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS00155 PF01648 4'-phosphopantetheinyl transferase superfamily DA456_RS00155 PF17837 4'-phosphopantetheinyl transferase N-terminal domain DA456_RS00160 PF01738 Dienelactone hydrolase family DA456_RS00170 PF00486 Transcriptional regulatory protein, C terminal DA456_RS00170 PF00072 Response regulator receiver domain DA456_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS00190 PF00375 Sodium:dicarboxylate symporter family DA456_RS00195 PF10263 SprT-like family DA456_RS00200 PF01171 PP-loop family DA456_RS00205 PF03352 Methyladenine glycosylase DA456_RS00210 PF03358 NADPH-dependent FMN reductase DA456_RS00215 PF03960 ArsC family DA456_RS00220 PF00085 Thioredoxin DA456_RS00235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS00235 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS00235 PF01627 Hpt domain DA456_RS00235 PF00072 Response regulator receiver domain DA456_RS00235 PF00672 HAMP domain DA456_RS00235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DA456_RS00240 PF00291 Pyridoxal-phosphate dependent enzyme DA456_RS00245 PF05958 tRNA (Uracil-5-)-methyltransferase DA456_RS00245 PF01938 TRAM domain DA456_RS00250 PF13291 ACT domain DA456_RS00250 PF04607 Region found in RelA / SpoT proteins DA456_RS00250 PF02824 TGS domain DA456_RS00255 PF03819 MazG nucleotide pyrophosphohydrolase domain DA456_RS00280 PF00551 Formyl transferase DA456_RS00285 PF02769 AIR synthase related protein, C-terminal domain DA456_RS00285 PF00586 AIR synthase related protein, N-terminal domain DA456_RS00300 PF01594 AI-2E family transporter DA456_RS00310 PF00308 Bacterial dnaA protein DA456_RS00315 PF02146 Sir2 family DA456_RS00320 PF00877 NlpC/P60 family DA456_RS00320 PF01476 LysM domain DA456_RS00325 PF00877 NlpC/P60 family DA456_RS00330 PF07995 Glucose / Sorbosone dehydrogenase DA456_RS00335 PF12557 Cob(I)alamin adenosyltransferase N terminal DA456_RS00335 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DA456_RS00340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DA456_RS00340 PF07685 CobB/CobQ-like glutamine amidotransferase domain DA456_RS00345 PF00881 Nitroreductase family DA456_RS00350 PF17113 Regulatory signalling modulator protein AmpE DA456_RS00350 PF03186 CobD/Cbib protein DA456_RS00355 PF00155 Aminotransferase class I and II DA456_RS00360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DA456_RS00360 PF07685 CobB/CobQ-like glutamine amidotransferase domain DA456_RS00365 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DA456_RS00370 PF02277 Phosphoribosyltransferase DA456_RS00375 PF00300 Histidine phosphatase superfamily (branch 1) DA456_RS00380 PF02654 Cobalamin-5-phosphate synthase DA456_RS00390 PF00255 Glutathione peroxidase DA456_RS00395 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DA456_RS00410 PF02646 RmuC family DA456_RS00430 PF00892 EamA-like transporter family DA456_RS00440 PF00206 Lyase DA456_RS00440 PF10415 Fumarase C C-terminus DA456_RS00450 PF01722 BolA-like protein DA456_RS00455 PF17773 UPF0176 acylphosphatase like domain DA456_RS00455 PF00581 Rhodanese-like domain DA456_RS00465 PF00005 ABC transporter DA456_RS00465 PF00664 ABC transporter transmembrane region DA456_RS00470 PF00563 EAL domain DA456_RS00470 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS00470 PF08448 PAS fold DA456_RS00480 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS00485 PF00106 short chain dehydrogenase DA456_RS00490 PF13419 Haloacid dehalogenase-like hydrolase DA456_RS00500 PF01979 Amidohydrolase family DA456_RS00505 PF01008 Initiation factor 2 subunit family DA456_RS00510 PF00521 DNA gyrase/topoisomerase IV, subunit A DA456_RS00510 PF03989 DNA gyrase C-terminal domain, beta-propeller DA456_RS00515 PF00266 Aminotransferase class-V DA456_RS00520 PF00800 Prephenate dehydratase DA456_RS00520 PF01817 Chorismate mutase type II DA456_RS00520 PF01842 ACT domain DA456_RS00525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DA456_RS00530 PF02224 Cytidylate kinase DA456_RS00535 PF00575 S1 RNA binding domain DA456_RS00540 PF00216 Bacterial DNA-binding protein DA456_RS00550 PF10996 Beta-Casp domain DA456_RS00550 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DA456_RS00550 PF00753 Metallo-beta-lactamase superfamily DA456_RS00555 PF01370 NAD dependent epimerase/dehydratase family DA456_RS00560 PF00953 Glycosyl transferase family 4 DA456_RS00565 PF02719 Polysaccharide biosynthesis protein DA456_RS00580 PF00578 AhpC/TSA family DA456_RS00610 PF09285 Elongation factor P, C-terminal DA456_RS00610 PF08207 Elongation factor P (EF-P) KOW-like domain DA456_RS00610 PF01132 Elongation factor P (EF-P) OB domain DA456_RS00615 PF02566 OsmC-like protein DA456_RS00620 PF01047 MarR family DA456_RS00630 PF03466 LysR substrate binding domain DA456_RS00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS00640 PF01474 Class-II DAHP synthetase family DA456_RS00655 PF03880 DbpA RNA binding domain DA456_RS00655 PF00270 DEAD/DEAH box helicase DA456_RS00655 PF00271 Helicase conserved C-terminal domain DA456_RS00660 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DA456_RS00665 PF05724 Thiopurine S-methyltransferase (TPMT) DA456_RS00670 PF01435 Peptidase family M48 DA456_RS00675 PF00155 Aminotransferase class I and II DA456_RS00680 PF01641 SelR domain DA456_RS00685 PF00255 Glutathione peroxidase DA456_RS00690 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS00690 PF00672 HAMP domain DA456_RS00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS00690 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DA456_RS00690 PF00072 Response regulator receiver domain DA456_RS00690 PF01627 Hpt domain DA456_RS00695 PF05496 Holliday junction DNA helicase RuvB P-loop domain DA456_RS00695 PF05491 RuvB C-terminal winged helix domain DA456_RS00695 PF17864 RuvB AAA lid domain DA456_RS00700 PF13185 GAF domain DA456_RS00730 PF02678 Pirin DA456_RS00730 PF17954 Quercetinase C-terminal cupin domain DA456_RS00735 PF03466 LysR substrate binding domain DA456_RS00735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS00745 PF01568 Molydopterin dinucleotide binding domain DA456_RS00745 PF00384 Molybdopterin oxidoreductase DA456_RS00750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS00750 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS00750 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS00755 PF09084 NMT1/THI5 like DA456_RS00765 PF05995 Cysteine dioxygenase type I DA456_RS00770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS00770 PF03466 LysR substrate binding domain DA456_RS00775 PF00296 Luciferase-like monooxygenase DA456_RS00780 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS00785 PF00005 ABC transporter DA456_RS00805 PF02386 Cation transport protein DA456_RS00815 PF08521 Two-component sensor kinase N-terminal DA456_RS00815 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS00830 PF00486 Transcriptional regulatory protein, C terminal DA456_RS00830 PF00072 Response regulator receiver domain DA456_RS00835 PF03795 YCII-related domain DA456_RS00840 PF04279 Intracellular septation protein A DA456_RS00845 PF02811 PHP domain DA456_RS00850 PF01300 Telomere recombination DA456_RS00855 PF02616 Segregation and condensation protein ScpA DA456_RS00860 PF04079 Segregation and condensation complex subunit ScpB DA456_RS00870 PF01479 S4 domain DA456_RS00870 PF00849 RNA pseudouridylate synthase DA456_RS00880 PF00324 Amino acid permease DA456_RS00885 PF00472 RF-1 domain DA456_RS00895 PF07690 Major Facilitator Superfamily DA456_RS00905 PF01329 Pterin 4 alpha carbinolamine dehydratase DA456_RS00910 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DA456_RS00915 PF00158 Sigma-54 interaction domain DA456_RS00915 PF18024 Helix-turn-helix domain DA456_RS00925 PF00501 AMP-binding enzyme DA456_RS00925 PF13193 AMP-binding enzyme C-terminal domain DA456_RS00925 PF16177 Acetyl-coenzyme A synthetase N-terminus DA456_RS00930 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS00935 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS00950 PF00005 ABC transporter DA456_RS00955 PF12833 Helix-turn-helix domain DA456_RS00965 PF00202 Aminotransferase class-III DA456_RS00970 PF04958 Arginine N-succinyltransferase beta subunit DA456_RS00975 PF04958 Arginine N-succinyltransferase beta subunit DA456_RS00980 PF00171 Aldehyde dehydrogenase family DA456_RS00985 PF04996 Succinylarginine dihydrolase DA456_RS00995 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DA456_RS01000 PF00885 6,7-dimethyl-8-ribityllumazine synthase DA456_RS01005 PF01212 Beta-eliminating lyase DA456_RS01010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DA456_RS01010 PF01411 tRNA synthetases class II (A) DA456_RS01010 PF02272 DHHA1 domain DA456_RS01015 PF13840 ACT domain DA456_RS01015 PF01842 ACT domain DA456_RS01015 PF00696 Amino acid kinase family DA456_RS01020 PF02599 Global regulator protein family DA456_RS01045 PF00571 CBS domain DA456_RS01045 PF01769 Divalent cation transporter DA456_RS01045 PF03448 MgtE intracellular N domain DA456_RS01050 PF03869 Arc-like DNA binding domain DA456_RS01095 PF12795 Mechanosensitive ion channel porin domain DA456_RS01095 PF00924 Mechanosensitive ion channel DA456_RS01095 PF12794 Mechanosensitive ion channel inner membrane domain 1 DA456_RS01115 PF00106 short chain dehydrogenase DA456_RS01120 PF00107 Zinc-binding dehydrogenase DA456_RS01120 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS01125 PF00106 short chain dehydrogenase DA456_RS01155 PF01965 DJ-1/PfpI family DA456_RS01155 PF12833 Helix-turn-helix domain DA456_RS01170 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DA456_RS01180 PF01177 Asp/Glu/Hydantoin racemase DA456_RS01185 PF13823 Alcohol dehydrogenase GroES-associated DA456_RS01185 PF00107 Zinc-binding dehydrogenase DA456_RS01185 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS01190 PF03466 LysR substrate binding domain DA456_RS01190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS01195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DA456_RS01195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DA456_RS01200 PF00171 Aldehyde dehydrogenase family DA456_RS01205 PF07687 Peptidase dimerisation domain DA456_RS01205 PF01546 Peptidase family M20/M25/M40 DA456_RS01215 PF03466 LysR substrate binding domain DA456_RS01215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS01225 PF01810 LysE type translocator DA456_RS01230 PF03315 Serine dehydratase beta chain DA456_RS01230 PF03313 Serine dehydratase alpha chain DA456_RS01235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS01235 PF03466 LysR substrate binding domain DA456_RS01250 PF02371 Transposase IS116/IS110/IS902 family DA456_RS01250 PF01548 Transposase DA456_RS01260 PF07063 Domain of unknown function (DUF1338) DA456_RS01265 PF00202 Aminotransferase class-III DA456_RS01270 PF00171 Aldehyde dehydrogenase family DA456_RS01275 PF01266 FAD dependent oxidoreductase DA456_RS01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS01280 PF08521 Two-component sensor kinase N-terminal DA456_RS01280 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS01285 PF00486 Transcriptional regulatory protein, C terminal DA456_RS01285 PF00072 Response regulator receiver domain DA456_RS01320 PF01590 GAF domain DA456_RS01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS01320 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS01320 PF08446 PAS fold DA456_RS01320 PF00360 Phytochrome region DA456_RS01335 PF07690 Major Facilitator Superfamily DA456_RS01340 PF01494 FAD binding domain DA456_RS01350 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DA456_RS01350 PF03641 Possible lysine decarboxylase DA456_RS01350 PF11892 Domain of unknown function (DUF3412) DA456_RS01355 PF08239 Bacterial SH3 domain DA456_RS01380 PF00120 Glutamine synthetase, catalytic domain DA456_RS01385 PF07690 Major Facilitator Superfamily DA456_RS01390 PF07317 Flagellar regulator YcgR DA456_RS01390 PF07238 PilZ domain DA456_RS01410 PF01584 CheW-like domain DA456_RS01410 PF00072 Response regulator receiver domain DA456_RS01415 PF03705 CheR methyltransferase, all-alpha domain DA456_RS01415 PF01739 CheR methyltransferase, SAM binding domain DA456_RS01420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS01420 PF03466 LysR substrate binding domain DA456_RS01425 PF02560 Cyanate lyase C-terminal domain DA456_RS01435 PF00460 Flagella basal body rod protein DA456_RS01440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DA456_RS01440 PF00460 Flagella basal body rod protein DA456_RS01445 PF03963 Flagellar hook capping protein - N-terminal region DA456_RS01450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DA456_RS01450 PF00460 Flagella basal body rod protein DA456_RS01450 PF07559 Flagellar basal body protein FlaE DA456_RS01455 PF00460 Flagella basal body rod protein DA456_RS01455 PF07559 Flagellar basal body protein FlaE DA456_RS01455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DA456_RS01465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DA456_RS01465 PF00460 Flagella basal body rod protein DA456_RS01470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DA456_RS01470 PF00460 Flagella basal body rod protein DA456_RS01475 PF02107 Flagellar L-ring protein DA456_RS01480 PF02119 Flagellar P-ring protein DA456_RS01485 PF10135 Rod binding protein DA456_RS01485 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DA456_RS01495 PF00669 Bacterial flagellin N-terminal helical region DA456_RS01495 PF00700 Bacterial flagellin C-terminal helical region DA456_RS01500 PF00535 Glycosyl transferase family 2 DA456_RS01505 PF00535 Glycosyl transferase family 2 DA456_RS01510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DA456_RS01510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DA456_RS01515 PF00669 Bacterial flagellin N-terminal helical region DA456_RS01515 PF00700 Bacterial flagellin C-terminal helical region DA456_RS01515 PF07196 Flagellin hook IN motif DA456_RS01520 PF03646 FlaG protein DA456_RS01525 PF07195 Flagellar hook-associated protein 2 C-terminus DA456_RS01525 PF07196 Flagellin hook IN motif DA456_RS01525 PF02465 Flagellar hook-associated protein 2 N-terminus DA456_RS01530 PF02561 Flagellar protein FliS DA456_RS01540 PF06490 Flagellar regulatory protein FleQ DA456_RS01540 PF00158 Sigma-54 interaction domain DA456_RS01540 PF02954 Bacterial regulatory protein, Fis family DA456_RS01545 PF13188 PAS domain DA456_RS01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS01545 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS01550 PF02954 Bacterial regulatory protein, Fis family DA456_RS01550 PF00072 Response regulator receiver domain DA456_RS01550 PF00158 Sigma-54 interaction domain DA456_RS01555 PF02049 Flagellar hook-basal body complex protein FliE DA456_RS01560 PF01514 Secretory protein of YscJ/FliF family DA456_RS01560 PF08345 Flagellar M-ring protein C-terminal DA456_RS01565 PF01706 FliG C-terminal domain DA456_RS01565 PF14841 FliG middle domain DA456_RS01565 PF14842 FliG N-terminal domain DA456_RS01575 PF18269 T3SS EscN ATPase C-terminal domain DA456_RS01575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA456_RS01585 PF13466 STAS domain DA456_RS01590 PF00486 Transcriptional regulatory protein, C terminal DA456_RS01590 PF00072 Response regulator receiver domain DA456_RS01615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DA456_RS01615 PF02154 Flagellar motor switch protein FliM DA456_RS01620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DA456_RS01625 PF04347 Flagellar biosynthesis protein, FliO DA456_RS01630 PF00813 FliP family DA456_RS01635 PF01313 Bacterial export proteins, family 3 DA456_RS01640 PF01311 Bacterial export proteins, family 1 DA456_RS01645 PF01312 FlhB HrpN YscU SpaS Family DA456_RS01650 PF00771 FHIPEP family DA456_RS01655 PF00448 SRP54-type protein, GTPase domain DA456_RS01660 PF10609 NUBPL iron-transfer P-loop NTPase DA456_RS01665 PF04539 Sigma-70 region 3 DA456_RS01665 PF04542 Sigma-70 region 2 DA456_RS01665 PF04545 Sigma-70, region 4 DA456_RS01670 PF00072 Response regulator receiver domain DA456_RS01675 PF04344 Chemotaxis phosphatase, CheZ DA456_RS01680 PF01584 CheW-like domain DA456_RS01680 PF02895 Signal transducing histidine kinase, homodimeric domain DA456_RS01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS01680 PF01627 Hpt domain DA456_RS01680 PF00072 Response regulator receiver domain DA456_RS01685 PF00072 Response regulator receiver domain DA456_RS01685 PF01339 CheB methylesterase DA456_RS01690 PF01618 MotA/TolQ/ExbB proton channel family DA456_RS01695 PF00691 OmpA family DA456_RS01695 PF13677 Membrane MotB of proton-channel complex MotA/MotB DA456_RS01700 PF13614 AAA domain DA456_RS01710 PF01584 CheW-like domain DA456_RS01725 PF00156 Phosphoribosyl transferase domain DA456_RS01730 PF13545 Crp-like helix-turn-helix domain DA456_RS01730 PF00027 Cyclic nucleotide-binding domain DA456_RS01740 PF04055 Radical SAM superfamily DA456_RS01740 PF06969 HemN C-terminal domain DA456_RS01755 PF00403 Heavy-metal-associated domain DA456_RS01765 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DA456_RS01765 PF12801 4Fe-4S binding domain DA456_RS01765 PF13746 4Fe-4S dicluster domain DA456_RS01780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DA456_RS01780 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DA456_RS01795 PF00115 Cytochrome C and Quinol oxidase polypeptide I DA456_RS01835 PF16168 Adhesin of bacterial autotransporter system, probable stalk DA456_RS01835 PF03212 Pertactin DA456_RS01835 PF13018 Extended Signal Peptide of Type V secretion system DA456_RS01835 PF03797 Autotransporter beta-domain DA456_RS01845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS01845 PF08447 PAS fold DA456_RS01855 PF00694 Aconitase C-terminal domain DA456_RS01855 PF00330 Aconitase family (aconitate hydratase) DA456_RS01860 PF18125 RlmM ferredoxin-like domain DA456_RS01860 PF01728 FtsJ-like methyltransferase DA456_RS01865 PF00171 Aldehyde dehydrogenase family DA456_RS01870 PF00583 Acetyltransferase (GNAT) family DA456_RS01875 PF01266 FAD dependent oxidoreductase DA456_RS01880 PF01042 Endoribonuclease L-PSP DA456_RS01885 PF14031 Putative serine dehydratase domain DA456_RS01885 PF01168 Alanine racemase, N-terminal domain DA456_RS01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS01890 PF03466 LysR substrate binding domain DA456_RS01895 PF13662 Toprim domain DA456_RS01895 PF02132 RecR protein DA456_RS01900 PF01312 FlhB HrpN YscU SpaS Family DA456_RS01910 PF00005 ABC transporter DA456_RS01915 PF03379 CcmB protein DA456_RS01920 PF01578 Cytochrome C assembly protein DA456_RS01925 PF04995 Heme exporter protein D (CcmD) DA456_RS01930 PF03100 CcmE DA456_RS01935 PF01578 Cytochrome C assembly protein DA456_RS01935 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DA456_RS01940 PF08534 Redoxin DA456_RS01945 PF03918 Cytochrome C biogenesis protein DA456_RS01965 PF00027 Cyclic nucleotide-binding domain DA456_RS01965 PF00520 Ion transport protein DA456_RS01975 PF13302 Acetyltransferase (GNAT) domain DA456_RS01980 PF02321 Outer membrane efflux protein DA456_RS01985 PF13533 Biotin-lipoyl like DA456_RS01995 PF04632 Fusaric acid resistance protein family DA456_RS02010 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS02010 PF00672 HAMP domain DA456_RS02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS02015 PF00486 Transcriptional regulatory protein, C terminal DA456_RS02015 PF00072 Response regulator receiver domain DA456_RS02025 PF01292 Prokaryotic cytochrome b561 DA456_RS02030 PF00174 Oxidoreductase molybdopterin binding domain DA456_RS02035 PF13473 Cupredoxin-like domain DA456_RS02035 PF09375 Imelysin DA456_RS02040 PF04261 Dyp-type peroxidase family DA456_RS02045 PF13473 Cupredoxin-like domain DA456_RS02045 PF09375 Imelysin DA456_RS02050 PF03239 Iron permease FTR1 family DA456_RS02055 PF00730 HhH-GPD superfamily base excision DNA repair protein DA456_RS02060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DA456_RS02060 PF02805 Metal binding domain of Ada DA456_RS02060 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DA456_RS02060 PF12833 Helix-turn-helix domain DA456_RS02065 PF00144 Beta-lactamase DA456_RS02070 PF01740 STAS domain DA456_RS02070 PF00916 Sulfate permease family DA456_RS02075 PF03969 AFG1-like ATPase DA456_RS02085 PF13419 Haloacid dehalogenase-like hydrolase DA456_RS02100 PF00293 NUDIX domain DA456_RS02105 PF01048 Phosphorylase superfamily DA456_RS02120 PF01494 FAD binding domain DA456_RS02125 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DA456_RS02130 PF00293 NUDIX domain DA456_RS02135 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DA456_RS02140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA456_RS02140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA456_RS02145 PF07690 Major Facilitator Superfamily DA456_RS02150 PF02567 Phenazine biosynthesis-like protein DA456_RS02160 PF03466 LysR substrate binding domain DA456_RS02160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS02170 PF00072 Response regulator receiver domain DA456_RS02170 PF13426 PAS domain DA456_RS02170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS02180 PF00199 Catalase DA456_RS02180 PF06628 Catalase-related immune-responsive DA456_RS02190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS02190 PF12729 Four helix bundle sensory module for signal transduction DA456_RS02190 PF00672 HAMP domain DA456_RS02200 PF00672 HAMP domain DA456_RS02200 PF12729 Four helix bundle sensory module for signal transduction DA456_RS02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS02205 PF00440 Bacterial regulatory proteins, tetR family DA456_RS02215 PF07715 TonB-dependent Receptor Plug Domain DA456_RS02220 PF00583 Acetyltransferase (GNAT) family DA456_RS02225 PF12146 Serine aminopeptidase, S33 DA456_RS02250 PF02599 Global regulator protein family DA456_RS02255 PF02447 GntP family permease DA456_RS02265 PF00356 Bacterial regulatory proteins, lacI family DA456_RS02275 PF03928 Haem-degrading DA456_RS02280 PF02754 Cysteine-rich domain DA456_RS02280 PF13183 4Fe-4S dicluster domain DA456_RS02285 PF01565 FAD binding domain DA456_RS02290 PF01565 FAD binding domain DA456_RS02290 PF02913 FAD linked oxidases, C-terminal domain DA456_RS02300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA456_RS02305 PF00563 EAL domain DA456_RS02305 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS02305 PF03707 Bacterial signalling protein N terminal repeat DA456_RS02310 PF01590 GAF domain DA456_RS02310 PF00360 Phytochrome region DA456_RS02310 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS02310 PF00563 EAL domain DA456_RS02320 PF04209 homogentisate 1,2-dioxygenase DA456_RS02330 PF00440 Bacterial regulatory proteins, tetR family DA456_RS02335 PF12706 Beta-lactamase superfamily domain DA456_RS02340 PF07690 Major Facilitator Superfamily DA456_RS02345 PF03466 LysR substrate binding domain DA456_RS02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS02385 PF03466 LysR substrate binding domain DA456_RS02385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS02390 PF03023 Lipid II flippase MurJ DA456_RS02395 PF00132 Bacterial transferase hexapeptide (six repeats) DA456_RS02435 PF01050 Mannose-6-phosphate isomerase DA456_RS02435 PF00483 Nucleotidyl transferase DA456_RS02440 PF02397 Bacterial sugar transferase DA456_RS02450 PF00781 Diacylglycerol kinase catalytic domain DA456_RS02455 PF00072 Response regulator receiver domain DA456_RS02455 PF00196 Bacterial regulatory proteins, luxR family DA456_RS02470 PF03473 MOSC domain DA456_RS02470 PF03476 MOSC N-terminal beta barrel domain DA456_RS02470 PF00111 2Fe-2S iron-sulfur cluster binding domain DA456_RS02475 PF01464 Transglycosylase SLT domain DA456_RS02475 PF14718 Soluble lytic murein transglycosylase L domain DA456_RS02480 PF12848 ABC transporter DA456_RS02480 PF16326 ABC transporter C-terminal domain DA456_RS02480 PF00005 ABC transporter DA456_RS02485 PF00582 Universal stress protein family DA456_RS02510 PF00378 Enoyl-CoA hydratase/isomerase DA456_RS02510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DA456_RS02510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DA456_RS02515 PF02803 Thiolase, C-terminal domain DA456_RS02515 PF00108 Thiolase, N-terminal domain DA456_RS02525 PF01396 Topoisomerase DNA binding C4 zinc finger DA456_RS02525 PF08272 Topoisomerase I zinc-ribbon-like DA456_RS02525 PF01131 DNA topoisomerase DA456_RS02525 PF01751 Toprim domain DA456_RS02540 PF03846 Cell division inhibitor SulA DA456_RS02545 PF01726 LexA DNA binding domain DA456_RS02545 PF00717 Peptidase S24-like DA456_RS02555 PF00440 Bacterial regulatory proteins, tetR family DA456_RS02560 PF00933 Glycosyl hydrolase family 3 N terminal domain DA456_RS02565 PF01048 Phosphorylase superfamily DA456_RS02575 PF03372 Endonuclease/Exonuclease/phosphatase family DA456_RS02580 PF13091 PLD-like domain DA456_RS02585 PF03706 Lysylphosphatidylglycerol synthase TM region DA456_RS02590 PF01380 SIS domain DA456_RS02590 PF01418 Helix-turn-helix domain, rpiR family DA456_RS02595 PF00294 pfkB family carbohydrate kinase DA456_RS02600 PF01261 Xylose isomerase-like TIM barrel DA456_RS02605 PF04962 KduI/IolB family DA456_RS02610 PF00171 Aldehyde dehydrogenase family DA456_RS02620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DA456_RS02620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA456_RS02620 PF00205 Thiamine pyrophosphate enzyme, central domain DA456_RS02625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA456_RS02625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA456_RS02630 PF01261 Xylose isomerase-like TIM barrel DA456_RS02635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA456_RS02635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA456_RS02640 PF13407 Periplasmic binding protein domain DA456_RS02645 PF00005 ABC transporter DA456_RS02650 PF02653 Branched-chain amino acid transport system / permease component DA456_RS02655 PF01258 Prokaryotic dksA/traR C4-type zinc finger DA456_RS02660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS02685 PF03334 Na+/H+ antiporter subunit DA456_RS02690 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DA456_RS02700 PF00361 Proton-conducting membrane transporter DA456_RS02705 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DA456_RS02710 PF00361 Proton-conducting membrane transporter DA456_RS02710 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DA456_RS02710 PF13244 Domain of unknown function (DUF4040) DA456_RS02710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DA456_RS02735 PF00158 Sigma-54 interaction domain DA456_RS02740 PF00296 Luciferase-like monooxygenase DA456_RS02745 PF02735 Ku70/Ku80 beta-barrel domain DA456_RS02750 PF04679 ATP dependent DNA ligase C terminal region DA456_RS02750 PF13298 DNA polymerase Ligase (LigD) DA456_RS02750 PF01068 ATP dependent DNA ligase domain DA456_RS02755 PF13091 PLD-like domain DA456_RS02760 PF00593 TonB dependent receptor DA456_RS02760 PF07715 TonB-dependent Receptor Plug Domain DA456_RS02765 PF03009 Glycerophosphoryl diester phosphodiesterase family DA456_RS02770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA456_RS02770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA456_RS02775 PF00117 Glutamine amidotransferase class-I DA456_RS02775 PF06418 CTP synthase N-terminus DA456_RS02780 PF03992 Antibiotic biosynthesis monooxygenase DA456_RS02785 PF02667 Short chain fatty acid transporter DA456_RS02795 PF01144 Coenzyme A transferase DA456_RS02800 PF01144 Coenzyme A transferase DA456_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS02805 PF03466 LysR substrate binding domain DA456_RS02815 PF01810 LysE type translocator DA456_RS02820 PF03358 NADPH-dependent FMN reductase DA456_RS02825 PF02563 Polysaccharide biosynthesis/export protein DA456_RS02825 PF10531 SLBB domain DA456_RS02825 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DA456_RS02830 PF02397 Bacterial sugar transferase DA456_RS02835 PF00534 Glycosyl transferases group 1 DA456_RS02835 PF13439 Glycosyltransferase Family 4 DA456_RS02840 PF13439 Glycosyltransferase Family 4 DA456_RS02840 PF00534 Glycosyl transferases group 1 DA456_RS02860 PF13807 G-rich domain on putative tyrosine kinase DA456_RS02860 PF13614 AAA domain DA456_RS02860 PF02706 Chain length determinant protein DA456_RS02865 PF01451 Low molecular weight phosphotyrosine protein phosphatase DA456_RS02870 PF00535 Glycosyl transferase family 2 DA456_RS02880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DA456_RS02885 PF00266 Aminotransferase class-V DA456_RS02890 PF01321 Creatinase/Prolidase N-terminal domain DA456_RS02890 PF00557 Metallopeptidase family M24 DA456_RS02900 PF00892 EamA-like transporter family DA456_RS02935 PF01242 6-pyruvoyl tetrahydropterin synthase DA456_RS02950 PF00486 Transcriptional regulatory protein, C terminal DA456_RS02950 PF00072 Response regulator receiver domain DA456_RS02955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS02960 PF01594 AI-2E family transporter DA456_RS02975 PF00361 Proton-conducting membrane transporter DA456_RS02980 PF00361 Proton-conducting membrane transporter DA456_RS02985 PF00361 Proton-conducting membrane transporter DA456_RS02985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DA456_RS02990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DA456_RS02995 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DA456_RS03000 PF12838 4Fe-4S dicluster domain DA456_RS03005 PF00146 NADH dehydrogenase DA456_RS03010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DA456_RS03010 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DA456_RS03010 PF00384 Molybdopterin oxidoreductase DA456_RS03015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DA456_RS03015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DA456_RS03025 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DA456_RS03025 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DA456_RS03030 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DA456_RS03035 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DA456_RS03040 PF00463 Isocitrate lyase family DA456_RS03055 PF13673 Acetyltransferase (GNAT) domain DA456_RS03060 PF08007 Cupin superfamily protein DA456_RS03065 PF08328 Adenylosuccinate lyase C-terminal DA456_RS03065 PF00206 Lyase DA456_RS03070 PF04356 Protein of unknown function (DUF489) DA456_RS03080 PF00293 NUDIX domain DA456_RS03085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS03085 PF03466 LysR substrate binding domain DA456_RS03090 PF00561 alpha/beta hydrolase fold DA456_RS03095 PF03971 Monomeric isocitrate dehydrogenase DA456_RS03100 PF00313 'Cold-shock' DNA-binding domain DA456_RS03105 PF02617 ATP-dependent Clp protease adaptor protein ClpS DA456_RS03110 PF17871 AAA lid domain DA456_RS03110 PF02861 Clp amino terminal domain, pathogenicity island component DA456_RS03110 PF00004 ATPase family associated with various cellular activities (AAA) DA456_RS03110 PF07724 AAA domain (Cdc48 subfamily) DA456_RS03110 PF10431 C-terminal, D2-small domain, of ClpB protein DA456_RS03115 PF01176 Translation initiation factor 1A / IF-1 DA456_RS03120 PF04377 Arginine-tRNA-protein transferase, C terminus DA456_RS03120 PF04376 Arginine-tRNA-protein transferase, N terminus DA456_RS03125 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DA456_RS03135 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DA456_RS03135 PF17854 FtsK alpha domain DA456_RS03135 PF01580 FtsK/SpoIIIE family DA456_RS03135 PF09397 Ftsk gamma domain DA456_RS03140 PF03548 Outer membrane lipoprotein carrier protein LolA DA456_RS03145 PF00004 ATPase family associated with various cellular activities (AAA) DA456_RS03145 PF12002 MgsA AAA+ ATPase C terminal DA456_RS03145 PF16193 AAA C-terminal domain DA456_RS03150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DA456_RS03155 PF02403 Seryl-tRNA synthetase N-terminal domain DA456_RS03155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA456_RS03160 PF14824 Sirohaem biosynthesis protein central DA456_RS03160 PF10414 Sirohaem synthase dimerisation region DA456_RS03160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA456_RS03165 PF13409 Glutathione S-transferase, N-terminal domain DA456_RS03170 PF02885 Glycosyl transferase family, helical bundle domain DA456_RS03170 PF00591 Glycosyl transferase family, a/b domain DA456_RS03175 PF04358 DsrC like protein DA456_RS03185 PF02635 DsrE/DsrF-like family DA456_RS03190 PF02635 DsrE/DsrF-like family DA456_RS03195 PF07690 Major Facilitator Superfamily DA456_RS03205 PF03466 LysR substrate binding domain DA456_RS03205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS03230 PF01027 Inhibitor of apoptosis-promoting Bax1 DA456_RS03235 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DA456_RS03235 PF08548 Peptidase M10 serralysin C terminal DA456_RS03240 PF02974 Protease inhibitor Inh DA456_RS03245 PF00005 ABC transporter DA456_RS03245 PF00664 ABC transporter transmembrane region DA456_RS03250 PF00529 HlyD membrane-fusion protein of T1SS DA456_RS03255 PF02321 Outer membrane efflux protein DA456_RS03270 PF00171 Aldehyde dehydrogenase family DA456_RS03275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS03275 PF03466 LysR substrate binding domain DA456_RS03285 PF00440 Bacterial regulatory proteins, tetR family DA456_RS03285 PF17938 Tetracyclin repressor-like, C-terminal domain DA456_RS03290 PF01915 Glycosyl hydrolase family 3 C-terminal domain DA456_RS03290 PF14310 Fibronectin type III-like domain DA456_RS03290 PF00933 Glycosyl hydrolase family 3 N terminal domain DA456_RS03300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DA456_RS03300 PF00437 Type II/IV secretion system protein DA456_RS03305 PF00482 Type II secretion system (T2SS), protein F DA456_RS03310 PF08334 Type II secretion system (T2SS), protein G DA456_RS03315 PF07963 Prokaryotic N-terminal methylation motif DA456_RS03315 PF12019 Type II transport protein GspH DA456_RS03330 PF03934 Type II secretion system (T2SS), protein K DA456_RS03350 PF00263 Bacterial type II and III secretion system protein DA456_RS03350 PF03958 Bacterial type II/III secretion system short domain DA456_RS03365 PF07690 Major Facilitator Superfamily DA456_RS03370 PF00392 Bacterial regulatory proteins, gntR family DA456_RS03370 PF07702 UTRA domain DA456_RS03375 PF07690 Major Facilitator Superfamily DA456_RS03385 PF00873 AcrB/AcrD/AcrF family DA456_RS03390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS03390 PF00529 HlyD membrane-fusion protein of T1SS DA456_RS03395 PF13533 Biotin-lipoyl like DA456_RS03400 PF00561 alpha/beta hydrolase fold DA456_RS03405 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS03405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS03410 PF00072 Response regulator receiver domain DA456_RS03410 PF00486 Transcriptional regulatory protein, C terminal DA456_RS03415 PF01226 Formate/nitrite transporter DA456_RS03425 PF00593 TonB dependent receptor DA456_RS03425 PF07715 TonB-dependent Receptor Plug Domain DA456_RS03435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA456_RS03435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA456_RS03435 PF01842 ACT domain DA456_RS03445 PF13378 Enolase C-terminal domain-like DA456_RS03445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DA456_RS03450 PF07690 Major Facilitator Superfamily DA456_RS03455 PF00392 Bacterial regulatory proteins, gntR family DA456_RS03455 PF07729 FCD domain DA456_RS03465 PF02371 Transposase IS116/IS110/IS902 family DA456_RS03465 PF01548 Transposase DA456_RS03475 PF13556 PucR C-terminal helix-turn-helix domain DA456_RS03475 PF17853 GGDEF-like domain DA456_RS03475 PF05651 Putative sugar diacid recognition DA456_RS03480 PF02595 Glycerate kinase family DA456_RS03485 PF00672 HAMP domain DA456_RS03485 PF12729 Four helix bundle sensory module for signal transduction DA456_RS03485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS03495 PF05145 Transition state regulatory protein AbrB DA456_RS03500 PF03466 LysR substrate binding domain DA456_RS03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS03510 PF18081 Fanconi anemia-associated nuclease SAP domain DA456_RS03510 PF08774 VRR-NUC domain DA456_RS03525 PF12849 PBP superfamily domain DA456_RS03530 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS03535 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS03540 PF00005 ABC transporter DA456_RS03545 PF03466 LysR substrate binding domain DA456_RS03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS03550 PF00561 alpha/beta hydrolase fold DA456_RS03555 PF18267 Rubredoxin NAD+ reductase C-terminal domain DA456_RS03555 PF13806 Rieske-like [2Fe-2S] domain DA456_RS03555 PF04324 BFD-like [2Fe-2S] binding domain DA456_RS03555 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DA456_RS03555 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS03555 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DA456_RS03560 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DA456_RS03560 PF18267 Rubredoxin NAD+ reductase C-terminal domain DA456_RS03560 PF04324 BFD-like [2Fe-2S] binding domain DA456_RS03560 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DA456_RS03560 PF13806 Rieske-like [2Fe-2S] domain DA456_RS03560 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS03570 PF01136 Peptidase family U32 DA456_RS03570 PF12392 Collagenase DA456_RS03575 PF00005 ABC transporter DA456_RS03580 PF01032 FecCD transport family DA456_RS03590 PF00300 Histidine phosphatase superfamily (branch 1) DA456_RS03600 PF00072 Response regulator receiver domain DA456_RS03600 PF00486 Transcriptional regulatory protein, C terminal DA456_RS03610 PF08447 PAS fold DA456_RS03610 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS03610 PF08448 PAS fold DA456_RS03610 PF00563 EAL domain DA456_RS03630 PF02382 N-terminal domain in RTX protein DA456_RS03630 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DA456_RS03630 PF06594 Haemolysin-type calcium binding protein related domain DA456_RS03630 PF03497 Anthrax toxin LF subunit DA456_RS03645 PF00392 Bacterial regulatory proteins, gntR family DA456_RS03645 PF00155 Aminotransferase class I and II DA456_RS03650 PF00916 Sulfate permease family DA456_RS03650 PF01740 STAS domain DA456_RS03655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS03655 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS03655 PF00672 HAMP domain DA456_RS03660 PF00072 Response regulator receiver domain DA456_RS03660 PF00486 Transcriptional regulatory protein, C terminal DA456_RS03665 PF02321 Outer membrane efflux protein DA456_RS03675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS03680 PF00873 AcrB/AcrD/AcrF family DA456_RS03685 PF01546 Peptidase family M20/M25/M40 DA456_RS03685 PF07687 Peptidase dimerisation domain DA456_RS03690 PF08479 POTRA domain, ShlB-type DA456_RS03690 PF17287 POTRA domain DA456_RS03690 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DA456_RS03695 PF13332 Hemagglutinin repeat DA456_RS03695 PF05594 Haemagluttinin repeat DA456_RS03695 PF15526 Novel toxin 21 DA456_RS03695 PF05860 haemagglutination activity domain DA456_RS03695 PF04829 Pre-toxin domain with VENN motif DA456_RS03725 PF04829 Pre-toxin domain with VENN motif DA456_RS03725 PF13332 Hemagglutinin repeat DA456_RS03730 PF07262 CDI immunity protein DA456_RS03795 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family DA456_RS03815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS03815 PF03466 LysR substrate binding domain DA456_RS03820 PF00682 HMGL-like DA456_RS03820 PF07836 DmpG-like communication domain DA456_RS03825 PF03737 Aldolase/RraA DA456_RS03825 PF00180 Isocitrate/isopropylmalate dehydrogenase DA456_RS03830 PF03737 Aldolase/RraA DA456_RS03840 PF03060 Nitronate monooxygenase DA456_RS03855 PF00296 Luciferase-like monooxygenase DA456_RS03860 PF00296 Luciferase-like monooxygenase DA456_RS03865 PF07690 Major Facilitator Superfamily DA456_RS03870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS03870 PF03466 LysR substrate binding domain DA456_RS03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS03875 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS03880 PF08548 Peptidase M10 serralysin C terminal DA456_RS03880 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DA456_RS03880 PF00413 Matrixin DA456_RS03885 PF01425 Amidase DA456_RS03890 PF00455 DeoR C terminal sensor domain DA456_RS03890 PF08220 DeoR-like helix-turn-helix domain DA456_RS03895 PF01546 Peptidase family M20/M25/M40 DA456_RS03920 PF03466 LysR substrate binding domain DA456_RS03920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS03925 PF00248 Aldo/keto reductase family DA456_RS03930 PF05726 Pirin C-terminal cupin domain DA456_RS03930 PF02678 Pirin DA456_RS03935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS03935 PF03466 LysR substrate binding domain DA456_RS03950 PF02470 MlaD protein DA456_RS03955 PF04403 Paraquat-inducible protein A DA456_RS03960 PF04403 Paraquat-inducible protein A DA456_RS03970 PF02868 Thermolysin metallopeptidase, alpha-helical domain DA456_RS03970 PF16485 Protealysin propeptide DA456_RS03970 PF01447 Thermolysin metallopeptidase, catalytic domain DA456_RS03990 PF01554 MatE DA456_RS04000 PF14310 Fibronectin type III-like domain DA456_RS04000 PF01915 Glycosyl hydrolase family 3 C-terminal domain DA456_RS04000 PF07691 PA14 domain DA456_RS04000 PF00933 Glycosyl hydrolase family 3 N terminal domain DA456_RS04025 PF02803 Thiolase, C-terminal domain DA456_RS04025 PF00108 Thiolase, N-terminal domain DA456_RS04030 PF00378 Enoyl-CoA hydratase/isomerase DA456_RS04035 PF04717 Type VI secretion system, phage-baseplate injector DA456_RS04040 PF01709 Transcriptional regulator DA456_RS04045 PF07714 Protein tyrosine kinase DA456_RS04060 PF00246 Zinc carboxypeptidase DA456_RS04060 PF18027 Cytosolic carboxypeptidase N-terminal domain DA456_RS04070 PF01037 Lrp/AsnC ligand binding domain DA456_RS04070 PF13404 AsnC-type helix-turn-helix domain DA456_RS04080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA456_RS04100 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA456_RS04100 PF07683 Cobalamin synthesis protein cobW C-terminal domain DA456_RS04105 PF02514 CobN/Magnesium Chelatase DA456_RS04110 PF13519 von Willebrand factor type A domain DA456_RS04110 PF07728 AAA domain (dynein-related subfamily) DA456_RS04110 PF17863 AAA lid domain DA456_RS04125 PF00072 Response regulator receiver domain DA456_RS04125 PF02954 Bacterial regulatory protein, Fis family DA456_RS04125 PF00158 Sigma-54 interaction domain DA456_RS04140 PF02673 Bacitracin resistance protein BacA DA456_RS04155 PF12146 Serine aminopeptidase, S33 DA456_RS04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS04160 PF03466 LysR substrate binding domain DA456_RS04165 PF02525 Flavodoxin-like fold DA456_RS04195 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DA456_RS04195 PF00128 Alpha amylase, catalytic domain DA456_RS04205 PF00128 Alpha amylase, catalytic domain DA456_RS04210 PF02446 4-alpha-glucanotransferase DA456_RS04215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DA456_RS04215 PF11941 Domain of unknown function (DUF3459) DA456_RS04215 PF00128 Alpha amylase, catalytic domain DA456_RS04220 PF00534 Glycosyl transferases group 1 DA456_RS04220 PF08323 Starch synthase catalytic domain DA456_RS04225 PF00583 Acetyltransferase (GNAT) family DA456_RS04235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DA456_RS04235 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DA456_RS04240 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DA456_RS04240 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DA456_RS04250 PF00723 Glycosyl hydrolases family 15 DA456_RS04255 PF13532 2OG-Fe(II) oxygenase superfamily DA456_RS04280 PF00483 Nucleotidyl transferase DA456_RS04285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA456_RS04285 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS04290 PF00072 Response regulator receiver domain DA456_RS04290 PF13426 PAS domain DA456_RS04290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS04305 PF10417 C-terminal domain of 1-Cys peroxiredoxin DA456_RS04305 PF00578 AhpC/TSA family DA456_RS04310 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS04310 PF13192 Thioredoxin domain DA456_RS04315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA456_RS04335 PF02321 Outer membrane efflux protein DA456_RS04340 PF00873 AcrB/AcrD/AcrF family DA456_RS04345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS04355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS04355 PF16591 Helical bimodular sensor domain DA456_RS04355 PF00672 HAMP domain DA456_RS04360 PF00005 ABC transporter DA456_RS04365 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS04370 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS04380 PF00005 ABC transporter DA456_RS04380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS04385 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS04385 PF12911 N-terminal TM domain of oligopeptide transport permease C DA456_RS04390 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS04395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS04400 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS04405 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS04410 PF00005 ABC transporter DA456_RS04415 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS04420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS04420 PF03466 LysR substrate binding domain DA456_RS04425 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS04425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA456_RS04435 PF03824 High-affinity nickel-transport protein DA456_RS04445 PF03466 LysR substrate binding domain DA456_RS04445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS04450 PF00664 ABC transporter transmembrane region DA456_RS04450 PF00005 ABC transporter DA456_RS04455 PF00440 Bacterial regulatory proteins, tetR family DA456_RS04475 PF00294 pfkB family carbohydrate kinase DA456_RS04485 PF03747 ADP-ribosylglycohydrolase DA456_RS04490 PF00392 Bacterial regulatory proteins, gntR family DA456_RS04490 PF07702 UTRA domain DA456_RS04495 PF00975 Thioesterase domain DA456_RS04495 PF00550 Phosphopantetheine attachment site DA456_RS04495 PF00668 Condensation domain DA456_RS04495 PF00501 AMP-binding enzyme DA456_RS04495 PF13193 AMP-binding enzyme C-terminal domain DA456_RS04500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS04500 PF03466 LysR substrate binding domain DA456_RS04505 PF00107 Zinc-binding dehydrogenase DA456_RS04505 PF00698 Acyl transferase domain DA456_RS04505 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS04505 PF16197 Ketoacyl-synthetase C-terminal extension DA456_RS04505 PF00109 Beta-ketoacyl synthase, N-terminal domain DA456_RS04505 PF08659 KR domain DA456_RS04505 PF00550 Phosphopantetheine attachment site DA456_RS04505 PF14765 Polyketide synthase dehydratase DA456_RS04505 PF02801 Beta-ketoacyl synthase, C-terminal domain DA456_RS04515 PF00155 Aminotransferase class I and II DA456_RS04515 PF00392 Bacterial regulatory proteins, gntR family DA456_RS04525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DA456_RS04525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DA456_RS04525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DA456_RS04525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DA456_RS04535 PF00437 Type II/IV secretion system protein DA456_RS04540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS04540 PF00005 ABC transporter DA456_RS04545 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS04545 PF12911 N-terminal TM domain of oligopeptide transport permease C DA456_RS04550 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS04555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS04560 PF05698 Bacterial trigger factor protein (TF) C-terminus DA456_RS04565 PF00793 DAHP synthetase I family DA456_RS04580 PF00072 Response regulator receiver domain DA456_RS04580 PF00196 Bacterial regulatory proteins, luxR family DA456_RS04585 PF01541 GIY-YIG catalytic domain DA456_RS04585 PF02151 UvrB/uvrC motif DA456_RS04585 PF08459 UvrC Helix-hairpin-helix N-terminal DA456_RS04590 PF01066 CDP-alcohol phosphatidyltransferase DA456_RS04610 PF07715 TonB-dependent Receptor Plug Domain DA456_RS04610 PF00593 TonB dependent receptor DA456_RS04615 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS04620 PF00005 ABC transporter DA456_RS04625 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS04630 PF01593 Flavin containing amine oxidoreductase DA456_RS04635 PF01042 Endoribonuclease L-PSP DA456_RS04640 PF02653 Branched-chain amino acid transport system / permease component DA456_RS04645 PF00005 ABC transporter DA456_RS04650 PF13407 Periplasmic binding protein domain DA456_RS04660 PF12833 Helix-turn-helix domain DA456_RS04670 PF06903 VirK protein DA456_RS04675 PF12729 Four helix bundle sensory module for signal transduction DA456_RS04675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS04675 PF00672 HAMP domain DA456_RS04690 PF00005 ABC transporter DA456_RS04695 PF02653 Branched-chain amino acid transport system / permease component DA456_RS04700 PF02653 Branched-chain amino acid transport system / permease component DA456_RS04715 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS04715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS04715 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS04725 PF00296 Luciferase-like monooxygenase DA456_RS04735 PF07519 Tannase and feruloyl esterase DA456_RS04850 PF00857 Isochorismatase family DA456_RS04855 PF03171 2OG-Fe(II) oxygenase superfamily DA456_RS04855 PF14226 non-haem dioxygenase in morphine synthesis N-terminal DA456_RS04865 PF18416 N-acetylglucosamine binding protein domain 2 DA456_RS04865 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DA456_RS04870 PF08267 Cobalamin-independent synthase, N-terminal domain DA456_RS04870 PF01717 Cobalamin-independent synthase, Catalytic domain DA456_RS04885 PF12729 Four helix bundle sensory module for signal transduction DA456_RS04885 PF00672 HAMP domain DA456_RS04885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS05030 PF00717 Peptidase S24-like DA456_RS05030 PF01381 Helix-turn-helix DA456_RS05110 PF04860 Phage portal protein DA456_RS05205 PF00182 Chitinase class I DA456_RS05240 PF03459 TOBE domain DA456_RS05240 PF00005 ABC transporter DA456_RS05245 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS05255 PF03060 Nitronate monooxygenase DA456_RS05260 PF00440 Bacterial regulatory proteins, tetR family DA456_RS05260 PF16925 Tetracyclin repressor-like, C-terminal domain DA456_RS05265 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS05265 PF00107 Zinc-binding dehydrogenase DA456_RS05275 PF00589 Phage integrase family DA456_RS05275 PF02899 Phage integrase, N-terminal SAM-like domain DA456_RS05285 PF09334 tRNA synthetases class I (M) DA456_RS05290 PF01266 FAD dependent oxidoreductase DA456_RS05290 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DA456_RS05300 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DA456_RS05305 PF00291 Pyridoxal-phosphate dependent enzyme DA456_RS05315 PF01810 LysE type translocator DA456_RS05320 PF00465 Iron-containing alcohol dehydrogenase DA456_RS05325 PF00144 Beta-lactamase DA456_RS05330 PF12833 Helix-turn-helix domain DA456_RS05330 PF01965 DJ-1/PfpI family DA456_RS05355 PF06505 Activator of aromatic catabolism DA456_RS05355 PF02830 V4R domain DA456_RS05355 PF02954 Bacterial regulatory protein, Fis family DA456_RS05355 PF00158 Sigma-54 interaction domain DA456_RS05360 PF00171 Aldehyde dehydrogenase family DA456_RS05390 PF07690 Major Facilitator Superfamily DA456_RS05395 PF03573 outer membrane porin, OprD family DA456_RS05405 PF00378 Enoyl-CoA hydratase/isomerase DA456_RS05410 PF00171 Aldehyde dehydrogenase family DA456_RS05415 PF00501 AMP-binding enzyme DA456_RS05415 PF07993 Male sterility protein DA456_RS05415 PF00550 Phosphopantetheine attachment site DA456_RS05420 PF02803 Thiolase, C-terminal domain DA456_RS05420 PF00108 Thiolase, N-terminal domain DA456_RS05430 PF01042 Endoribonuclease L-PSP DA456_RS05435 PF03466 LysR substrate binding domain DA456_RS05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS05440 PF03466 LysR substrate binding domain DA456_RS05440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS05445 PF03746 LamB/YcsF family DA456_RS05455 PF02626 Carboxyltransferase domain, subdomain A and B DA456_RS05475 PF03573 outer membrane porin, OprD family DA456_RS05480 PF07690 Major Facilitator Superfamily DA456_RS05485 PF00155 Aminotransferase class I and II DA456_RS05490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS05490 PF03466 LysR substrate binding domain DA456_RS05495 PF00364 Biotin-requiring enzyme DA456_RS05500 PF02785 Biotin carboxylase C-terminal domain DA456_RS05500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA456_RS05500 PF00289 Biotin carboxylase, N-terminal domain DA456_RS05505 PF02682 Carboxyltransferase domain, subdomain C and D DA456_RS05510 PF02626 Carboxyltransferase domain, subdomain A and B DA456_RS05520 PF03746 LamB/YcsF family DA456_RS05525 PF00106 short chain dehydrogenase DA456_RS05530 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS05535 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS05540 PF00005 ABC transporter DA456_RS05545 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS05570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DA456_RS05570 PF13378 Enolase C-terminal domain-like DA456_RS05575 PF07690 Major Facilitator Superfamily DA456_RS05580 PF03466 LysR substrate binding domain DA456_RS05580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS05595 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS05595 PF08447 PAS fold DA456_RS05595 PF08448 PAS fold DA456_RS05595 PF00563 EAL domain DA456_RS05605 PF00111 2Fe-2S iron-sulfur cluster binding domain DA456_RS05605 PF00175 Oxidoreductase NAD-binding domain DA456_RS05610 PF00355 Rieske [2Fe-2S] domain DA456_RS05625 PF07883 Cupin domain DA456_RS05625 PF01381 Helix-turn-helix DA456_RS05630 PF16363 GDP-mannose 4,6 dehydratase DA456_RS05640 PF03275 UDP-galactopyranose mutase DA456_RS05650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS05650 PF13426 PAS domain DA456_RS05650 PF00072 Response regulator receiver domain DA456_RS05665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DA456_RS05665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DA456_RS05665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DA456_RS05670 PF00893 Small Multidrug Resistance protein DA456_RS05675 PF00893 Small Multidrug Resistance protein DA456_RS05680 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DA456_RS05685 PF01522 Polysaccharide deacetylase DA456_RS05690 PF01370 NAD dependent epimerase/dehydratase family DA456_RS05690 PF02911 Formyl transferase, C-terminal domain DA456_RS05690 PF00551 Formyl transferase DA456_RS05695 PF00535 Glycosyl transferase family 2 DA456_RS05700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DA456_RS05720 PF12911 N-terminal TM domain of oligopeptide transport permease C DA456_RS05720 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS05725 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS05730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS05735 PF00005 ABC transporter DA456_RS05735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS05740 PF00005 ABC transporter DA456_RS05740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS05745 PF07702 UTRA domain DA456_RS05745 PF00392 Bacterial regulatory proteins, gntR family DA456_RS05765 PF03600 Citrate transporter DA456_RS05770 PF03466 LysR substrate binding domain DA456_RS05770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS05775 PF02567 Phenazine biosynthesis-like protein DA456_RS05885 PF02447 GntP family permease DA456_RS05915 PF00561 alpha/beta hydrolase fold DA456_RS05920 PF01266 FAD dependent oxidoreductase DA456_RS05930 PF00202 Aminotransferase class-III DA456_RS05945 PF03073 TspO/MBR family DA456_RS05955 PF00672 HAMP domain DA456_RS05955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS05955 PF12729 Four helix bundle sensory module for signal transduction DA456_RS05960 PF00873 AcrB/AcrD/AcrF family DA456_RS05965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS05965 PF00529 HlyD membrane-fusion protein of T1SS DA456_RS05970 PF02321 Outer membrane efflux protein DA456_RS05975 PF00202 Aminotransferase class-III DA456_RS05980 PF12704 MacB-like periplasmic core domain DA456_RS05980 PF02687 FtsX-like permease family DA456_RS05980 PF00005 ABC transporter DA456_RS05985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS05990 PF00501 AMP-binding enzyme DA456_RS05990 PF00550 Phosphopantetheine attachment site DA456_RS05990 PF00975 Thioesterase domain DA456_RS05990 PF00668 Condensation domain DA456_RS05990 PF13193 AMP-binding enzyme C-terminal domain DA456_RS05995 PF00550 Phosphopantetheine attachment site DA456_RS05995 PF13193 AMP-binding enzyme C-terminal domain DA456_RS05995 PF00668 Condensation domain DA456_RS05995 PF00501 AMP-binding enzyme DA456_RS06000 PF13193 AMP-binding enzyme C-terminal domain DA456_RS06000 PF00668 Condensation domain DA456_RS06000 PF00550 Phosphopantetheine attachment site DA456_RS06000 PF00975 Thioesterase domain DA456_RS06000 PF00501 AMP-binding enzyme DA456_RS06005 PF00664 ABC transporter transmembrane region DA456_RS06005 PF00005 ABC transporter DA456_RS06015 PF00975 Thioesterase domain DA456_RS06015 PF00550 Phosphopantetheine attachment site DA456_RS06015 PF00668 Condensation domain DA456_RS06015 PF13193 AMP-binding enzyme C-terminal domain DA456_RS06015 PF00501 AMP-binding enzyme DA456_RS06030 PF13193 AMP-binding enzyme C-terminal domain DA456_RS06030 PF00668 Condensation domain DA456_RS06030 PF00550 Phosphopantetheine attachment site DA456_RS06030 PF00975 Thioesterase domain DA456_RS06030 PF00501 AMP-binding enzyme DA456_RS06030 PF13193 AMP-binding enzyme C-terminal domain DA456_RS06030 PF00550 Phosphopantetheine attachment site DA456_RS06030 PF00975 Thioesterase domain DA456_RS06030 PF00501 AMP-binding enzyme DA456_RS06030 PF00668 Condensation domain DA456_RS06040 PF02321 Outer membrane efflux protein DA456_RS06060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS06075 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS06075 PF00107 Zinc-binding dehydrogenase DA456_RS06080 PF03737 Aldolase/RraA DA456_RS06085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA456_RS06085 PF01842 ACT domain DA456_RS06085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA456_RS06090 PF07690 Major Facilitator Superfamily DA456_RS06095 PF01614 Bacterial transcriptional regulator DA456_RS06095 PF09339 IclR helix-turn-helix domain DA456_RS06105 PF00149 Calcineurin-like phosphoesterase DA456_RS06110 PF13195 Protein of unknown function (DUF4011) DA456_RS06110 PF13086 AAA domain DA456_RS06110 PF13087 AAA domain DA456_RS06110 PF13086 AAA domain DA456_RS06110 PF13087 AAA domain DA456_RS06110 PF13195 Protein of unknown function (DUF4011) DA456_RS06120 PF01810 LysE type translocator DA456_RS06125 PF08447 PAS fold DA456_RS06125 PF13426 PAS domain DA456_RS06125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS06130 PF03737 Aldolase/RraA DA456_RS06140 PF00005 ABC transporter DA456_RS06145 PF01032 FecCD transport family DA456_RS06150 PF01032 FecCD transport family DA456_RS06155 PF01497 Periplasmic binding protein DA456_RS06160 PF06276 Ferric iron reductase FhuF-like transporter DA456_RS06160 PF04183 IucA / IucC family DA456_RS06165 PF03328 HpcH/HpaI aldolase/citrate lyase family DA456_RS06170 PF06276 Ferric iron reductase FhuF-like transporter DA456_RS06170 PF04183 IucA / IucC family DA456_RS06175 PF07690 Major Facilitator Superfamily DA456_RS06180 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DA456_RS06180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DA456_RS06185 PF04183 IucA / IucC family DA456_RS06185 PF06276 Ferric iron reductase FhuF-like transporter DA456_RS06190 PF00202 Aminotransferase class-III DA456_RS06195 PF07715 TonB-dependent Receptor Plug Domain DA456_RS06195 PF00593 TonB dependent receptor DA456_RS06200 PF04773 FecR protein DA456_RS06200 PF16220 Domain of unknown function (DUF4880) DA456_RS06205 PF04542 Sigma-70 region 2 DA456_RS06205 PF08281 Sigma-70, region 4 DA456_RS06215 PF00171 Aldehyde dehydrogenase family DA456_RS06225 PF00975 Thioesterase domain DA456_RS06225 PF00668 Condensation domain DA456_RS06225 PF00550 Phosphopantetheine attachment site DA456_RS06225 PF13193 AMP-binding enzyme C-terminal domain DA456_RS06225 PF00501 AMP-binding enzyme DA456_RS06230 PF00501 AMP-binding enzyme DA456_RS06230 PF13193 AMP-binding enzyme C-terminal domain DA456_RS06230 PF00668 Condensation domain DA456_RS06230 PF00550 Phosphopantetheine attachment site DA456_RS06240 PF01011 PQQ enzyme repeat DA456_RS06245 PF04198 Putative sugar-binding domain DA456_RS06250 PF02502 Ribose/Galactose Isomerase DA456_RS06255 PF00005 ABC transporter DA456_RS06260 PF02653 Branched-chain amino acid transport system / permease component DA456_RS06265 PF13407 Periplasmic binding protein domain DA456_RS06275 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS06275 PF00107 Zinc-binding dehydrogenase DA456_RS06280 PF02733 Dak1 domain DA456_RS06285 PF02734 DAK2 domain DA456_RS06295 PF00149 Calcineurin-like phosphoesterase DA456_RS06310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS06315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS06315 PF00005 ABC transporter DA456_RS06320 PF00005 ABC transporter DA456_RS06320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS06325 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS06325 PF12911 N-terminal TM domain of oligopeptide transport permease C DA456_RS06330 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS06335 PF13454 FAD-NAD(P)-binding DA456_RS06340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS06340 PF03466 LysR substrate binding domain DA456_RS06350 PF01738 Dienelactone hydrolase family DA456_RS06360 PF01565 FAD binding domain DA456_RS06360 PF13183 4Fe-4S dicluster domain DA456_RS06360 PF02913 FAD linked oxidases, C-terminal domain DA456_RS06365 PF03466 LysR substrate binding domain DA456_RS06365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS06370 PF03466 LysR substrate binding domain DA456_RS06370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS06375 PF07690 Major Facilitator Superfamily DA456_RS06380 PF01979 Amidohydrolase family DA456_RS06380 PF13382 Adenine deaminase C-terminal domain DA456_RS06390 PF13673 Acetyltransferase (GNAT) domain DA456_RS06395 PF08443 RimK-like ATP-grasp domain DA456_RS06395 PF18030 RimK PreATP-grasp domain DA456_RS06400 PF01544 CorA-like Mg2+ transporter protein DA456_RS06410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DA456_RS06410 PF14579 Helix-hairpin-helix motif DA456_RS06410 PF07733 Bacterial DNA polymerase III alpha NTPase domain DA456_RS06410 PF02811 PHP domain DA456_RS06410 PF01336 OB-fold nucleic acid binding domain DA456_RS06425 PF00717 Peptidase S24-like DA456_RS06425 PF01726 LexA DNA binding domain DA456_RS06430 PF00248 Aldo/keto reductase family DA456_RS06445 PF09084 NMT1/THI5 like DA456_RS06450 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS06455 PF00005 ABC transporter DA456_RS06460 PF13416 Bacterial extracellular solute-binding protein DA456_RS06470 PF12462 DNA helicase IV / RNA helicase N terminal DA456_RS06470 PF13361 UvrD-like helicase C-terminal domain DA456_RS06470 PF00580 UvrD/REP helicase N-terminal domain DA456_RS06475 PF00294 pfkB family carbohydrate kinase DA456_RS06495 PF00005 ABC transporter DA456_RS06500 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS06505 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS06510 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS06540 PF11254 Protein of unknown function (DUF3053) DA456_RS06565 PF12848 ABC transporter DA456_RS06565 PF00005 ABC transporter DA456_RS06570 PF10282 Lactonase, 7-bladed beta-propeller DA456_RS06575 PF07690 Major Facilitator Superfamily DA456_RS06580 PF03797 Autotransporter beta-domain DA456_RS06585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DA456_RS06585 PF02806 Alpha amylase, C-terminal all-beta domain DA456_RS06585 PF00128 Alpha amylase, catalytic domain DA456_RS06590 PF16657 Maltogenic Amylase, C-terminal domain DA456_RS06590 PF00128 Alpha amylase, catalytic domain DA456_RS06595 PF11896 Domain of unknown function (DUF3416) DA456_RS06595 PF00128 Alpha amylase, catalytic domain DA456_RS06610 PF03707 Bacterial signalling protein N terminal repeat DA456_RS06610 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS06610 PF00563 EAL domain DA456_RS06615 PF02321 Outer membrane efflux protein DA456_RS06620 PF00873 AcrB/AcrD/AcrF family DA456_RS06625 PF00873 AcrB/AcrD/AcrF family DA456_RS06630 PF13533 Biotin-lipoyl like DA456_RS06635 PF08534 Redoxin DA456_RS06640 PF03466 LysR substrate binding domain DA456_RS06640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS06645 PF04357 TamB, inner membrane protein subunit of TAM complex DA456_RS06650 PF07244 Surface antigen variable number repeat DA456_RS06650 PF17243 POTRA domain TamA domain 1 DA456_RS06650 PF01103 Surface antigen DA456_RS06660 PF03372 Endonuclease/Exonuclease/phosphatase family DA456_RS06665 PF00691 OmpA family DA456_RS06670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS06670 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS06670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS06675 PF03466 LysR substrate binding domain DA456_RS06675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS06680 PF13411 MerR HTH family regulatory protein DA456_RS06685 PF00682 HMGL-like DA456_RS06695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS06695 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS06695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS06700 PF01039 Carboxyl transferase domain DA456_RS06705 PF00378 Enoyl-CoA hydratase/isomerase DA456_RS06710 PF00289 Biotin carboxylase, N-terminal domain DA456_RS06710 PF02785 Biotin carboxylase C-terminal domain DA456_RS06710 PF00364 Biotin-requiring enzyme DA456_RS06710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA456_RS06715 PF01521 Iron-sulphur cluster biosynthesis DA456_RS06715 PF01106 NifU-like domain DA456_RS06720 PF01757 Acyltransferase family DA456_RS06730 PF02607 B12 binding domain DA456_RS06730 PF00809 Pterin binding enzyme DA456_RS06730 PF02965 Vitamin B12 dependent methionine synthase, activation domain DA456_RS06730 PF02574 Homocysteine S-methyltransferase DA456_RS06730 PF02310 B12 binding domain DA456_RS06735 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DA456_RS06735 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DA456_RS06750 PF08496 Peptidase family S49 N-terminal DA456_RS06750 PF01343 Peptidase family S49 DA456_RS06780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA456_RS06780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA456_RS06785 PF01925 Sulfite exporter TauE/SafE DA456_RS06790 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DA456_RS06790 PF00293 NUDIX domain DA456_RS06790 PF09297 NADH pyrophosphatase zinc ribbon domain DA456_RS06795 PF00378 Enoyl-CoA hydratase/isomerase DA456_RS06800 PF06745 KaiC DA456_RS06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS06805 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS06805 PF08448 PAS fold DA456_RS06805 PF13188 PAS domain DA456_RS06805 PF00072 Response regulator receiver domain DA456_RS06815 PF00072 Response regulator receiver domain DA456_RS06815 PF01627 Hpt domain DA456_RS06815 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS06815 PF00672 HAMP domain DA456_RS06815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DA456_RS06820 PF01339 CheB methylesterase DA456_RS06825 PF03705 CheR methyltransferase, all-alpha domain DA456_RS06825 PF01739 CheR methyltransferase, SAM binding domain DA456_RS06830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS06830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DA456_RS06830 PF00072 Response regulator receiver domain DA456_RS06830 PF00672 HAMP domain DA456_RS06830 PF01627 Hpt domain DA456_RS06830 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS06835 PF00072 Response regulator receiver domain DA456_RS06835 PF00486 Transcriptional regulatory protein, C terminal DA456_RS06845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA456_RS06850 PF12833 Helix-turn-helix domain DA456_RS06855 PF01547 Bacterial extracellular solute-binding protein DA456_RS06860 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS06865 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS06870 PF00005 ABC transporter DA456_RS06870 PF17912 MalK OB fold domain DA456_RS06875 PF08125 Mannitol dehydrogenase C-terminal domain DA456_RS06875 PF01232 Mannitol dehydrogenase Rossmann domain DA456_RS06880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DA456_RS06880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DA456_RS06885 PF00294 pfkB family carbohydrate kinase DA456_RS06895 PF03707 Bacterial signalling protein N terminal repeat DA456_RS06895 PF00563 EAL domain DA456_RS06895 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS06900 PF00107 Zinc-binding dehydrogenase DA456_RS06900 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS06905 PF03099 Biotin/lipoate A/B protein ligase family DA456_RS06905 PF00293 NUDIX domain DA456_RS06950 PF01266 FAD dependent oxidoreductase DA456_RS06965 PF03741 Integral membrane protein TerC family DA456_RS06965 PF03471 Transporter associated domain DA456_RS06975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS06975 PF03466 LysR substrate binding domain DA456_RS06980 PF07690 Major Facilitator Superfamily DA456_RS06990 PF04337 Protein of unknown function, DUF480 DA456_RS06995 PF08501 Shikimate dehydrogenase substrate binding domain DA456_RS07015 PF00768 D-alanyl-D-alanine carboxypeptidase DA456_RS07020 PF00171 Aldehyde dehydrogenase family DA456_RS07025 PF18807 Tripartite Tc toxins repeat DA456_RS07025 PF05785 Rho-activating domain of cytotoxic necrotizing factor DA456_RS07035 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS07035 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DA456_RS07045 PF12697 Alpha/beta hydrolase family DA456_RS07050 PF00171 Aldehyde dehydrogenase family DA456_RS07055 PF01613 Flavin reductase like domain DA456_RS07060 PF07729 FCD domain DA456_RS07060 PF00392 Bacterial regulatory proteins, gntR family DA456_RS07065 PF00293 NUDIX domain DA456_RS07065 PF09297 NADH pyrophosphatase zinc ribbon domain DA456_RS07075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DA456_RS07075 PF00925 GTP cyclohydrolase II DA456_RS07080 PF13416 Bacterial extracellular solute-binding protein DA456_RS07085 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS07095 PF08402 TOBE domain DA456_RS07095 PF00005 ABC transporter DA456_RS07100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS07100 PF03466 LysR substrate binding domain DA456_RS07105 PF00180 Isocitrate/isopropylmalate dehydrogenase DA456_RS07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS07110 PF03466 LysR substrate binding domain DA456_RS07115 PF00171 Aldehyde dehydrogenase family DA456_RS07125 PF01613 Flavin reductase like domain DA456_RS07135 PF02625 XdhC and CoxI family DA456_RS07135 PF13478 XdhC Rossmann domain DA456_RS07140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DA456_RS07140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DA456_RS07145 PF03450 CO dehydrogenase flavoprotein C-terminal domain DA456_RS07145 PF00941 FAD binding domain in molybdopterin dehydrogenase DA456_RS07150 PF10518 TAT (twin-arginine translocation) pathway signal sequence DA456_RS07150 PF01799 [2Fe-2S] binding domain DA456_RS07150 PF00111 2Fe-2S iron-sulfur cluster binding domain DA456_RS07155 PF06039 Malate:quinone oxidoreductase (Mqo) DA456_RS07165 PF00360 Phytochrome region DA456_RS07165 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS07165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS07165 PF08446 PAS fold DA456_RS07165 PF01590 GAF domain DA456_RS07170 PF00072 Response regulator receiver domain DA456_RS07200 PF02653 Branched-chain amino acid transport system / permease component DA456_RS07205 PF00005 ABC transporter DA456_RS07210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DA456_RS07215 PF08450 SMP-30/Gluconolactonase/LRE-like region DA456_RS07220 PF01263 Aldose 1-epimerase DA456_RS07225 PF01297 Zinc-uptake complex component A periplasmic DA456_RS07230 PF00950 ABC 3 transport family DA456_RS07235 PF00005 ABC transporter DA456_RS07250 PF02146 Sir2 family DA456_RS07255 PF00136 DNA polymerase family B DA456_RS07255 PF03104 DNA polymerase family B, exonuclease domain DA456_RS07270 PF00202 Aminotransferase class-III DA456_RS07275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS07275 PF03466 LysR substrate binding domain DA456_RS07280 PF00672 HAMP domain DA456_RS07280 PF16591 Helical bimodular sensor domain DA456_RS07280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS07295 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DA456_RS07300 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) DA456_RS07305 PF00583 Acetyltransferase (GNAT) family DA456_RS07310 PF13393 Histidyl-tRNA synthetase DA456_RS07310 PF03129 Anticodon binding domain DA456_RS07315 PF03466 LysR substrate binding domain DA456_RS07315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS07320 PF00107 Zinc-binding dehydrogenase DA456_RS07320 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS07335 PF06744 Type VI secretion protein IcmF C-terminal DA456_RS07335 PF14331 ImcF-related N-terminal domain DA456_RS07335 PF06761 Intracellular multiplication and human macrophage-killing DA456_RS07345 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DA456_RS07360 PF00072 Response regulator receiver domain DA456_RS07360 PF02954 Bacterial regulatory protein, Fis family DA456_RS07360 PF00158 Sigma-54 interaction domain DA456_RS07365 PF10431 C-terminal, D2-small domain, of ClpB protein DA456_RS07365 PF17871 AAA lid domain DA456_RS07365 PF07724 AAA domain (Cdc48 subfamily) DA456_RS07365 PF00004 ATPase family associated with various cellular activities (AAA) DA456_RS07375 PF05947 Type VI secretion system, TssF DA456_RS07385 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DA456_RS07400 PF05638 Type VI secretion system effector, Hcp DA456_RS07405 PF04717 Type VI secretion system, phage-baseplate injector DA456_RS07430 PF03471 Transporter associated domain DA456_RS07430 PF03741 Integral membrane protein TerC family DA456_RS07440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DA456_RS07450 PF06912 Protein of unknown function (DUF1275) DA456_RS07455 PF10672 S-adenosylmethionine-dependent methyltransferase DA456_RS07455 PF02926 THUMP domain DA456_RS07455 PF01170 Putative RNA methylase family UPF0020 DA456_RS07460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS07460 PF00672 HAMP domain DA456_RS07465 PF01614 Bacterial transcriptional regulator DA456_RS07465 PF09339 IclR helix-turn-helix domain DA456_RS07470 PF08402 TOBE domain DA456_RS07470 PF00005 ABC transporter DA456_RS07475 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS07480 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS07490 PF04324 BFD-like [2Fe-2S] binding domain DA456_RS07490 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS07500 PF01547 Bacterial extracellular solute-binding protein DA456_RS07510 PF04055 Radical SAM superfamily DA456_RS07510 PF06463 Molybdenum Cofactor Synthesis C DA456_RS07530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS07530 PF00672 HAMP domain DA456_RS07535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA456_RS07535 PF00205 Thiamine pyrophosphate enzyme, central domain DA456_RS07535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DA456_RS07540 PF03717 Penicillin-binding Protein dimerisation domain DA456_RS07540 PF00905 Penicillin binding protein transpeptidase domain DA456_RS07545 PF01638 HxlR-like helix-turn-helix DA456_RS07550 PF05368 NmrA-like family DA456_RS07565 PF01810 LysE type translocator DA456_RS07585 PF00083 Sugar (and other) transporter DA456_RS07590 PF01566 Natural resistance-associated macrophage protein DA456_RS07595 PF00083 Sugar (and other) transporter DA456_RS07605 PF01040 UbiA prenyltransferase family DA456_RS07610 PF04030 D-arabinono-1,4-lactone oxidase DA456_RS07610 PF01565 FAD binding domain DA456_RS07615 PF00106 short chain dehydrogenase DA456_RS07630 PF00723 Glycosyl hydrolases family 15 DA456_RS07640 PF00248 Aldo/keto reductase family DA456_RS07645 PF00005 ABC transporter DA456_RS07655 PF07759 Protein of unknown function (DUF1615) DA456_RS07660 PF04960 Glutaminase DA456_RS07665 PF00596 Class II Aldolase and Adducin N-terminal domain DA456_RS07675 PF00593 TonB dependent receptor DA456_RS07675 PF07715 TonB-dependent Receptor Plug Domain DA456_RS07680 PF02472 Biopolymer transport protein ExbD/TolR DA456_RS07685 PF01618 MotA/TolQ/ExbB proton channel family DA456_RS07690 PF03544 Gram-negative bacterial TonB protein C-terminal DA456_RS07705 PF02630 SCO1/SenC DA456_RS07715 PF00529 HlyD membrane-fusion protein of T1SS DA456_RS07715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS07720 PF00873 AcrB/AcrD/AcrF family DA456_RS07725 PF01590 GAF domain DA456_RS07725 PF00360 Phytochrome region DA456_RS07725 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS07725 PF00563 EAL domain DA456_RS07730 PF00296 Luciferase-like monooxygenase DA456_RS07740 PF00296 Luciferase-like monooxygenase DA456_RS07750 PF01645 Conserved region in glutamate synthase DA456_RS07755 PF01493 GXGXG motif DA456_RS07765 PF00120 Glutamine synthetase, catalytic domain DA456_RS07785 PF02649 Type I GTP cyclohydrolase folE2 DA456_RS07790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS07790 PF03466 LysR substrate binding domain DA456_RS07795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS07800 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS07805 PF12911 N-terminal TM domain of oligopeptide transport permease C DA456_RS07805 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS07810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS07810 PF00005 ABC transporter DA456_RS07815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS07815 PF00005 ABC transporter DA456_RS07820 PF01546 Peptidase family M20/M25/M40 DA456_RS07820 PF07687 Peptidase dimerisation domain DA456_RS07825 PF07687 Peptidase dimerisation domain DA456_RS07825 PF01546 Peptidase family M20/M25/M40 DA456_RS07830 PF01425 Amidase DA456_RS07835 PF12706 Beta-lactamase superfamily domain DA456_RS07845 PF07969 Amidohydrolase family DA456_RS07850 PF00005 ABC transporter DA456_RS07855 PF00005 ABC transporter DA456_RS07860 PF06007 Phosphonate metabolism protein PhnJ DA456_RS07865 PF05861 Bacterial phosphonate metabolism protein (PhnI) DA456_RS07875 PF06754 Phosphonate metabolism protein PhnG DA456_RS07880 PF00392 Bacterial regulatory proteins, gntR family DA456_RS07880 PF07702 UTRA domain DA456_RS07885 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS07895 PF00005 ABC transporter DA456_RS07900 PF00672 HAMP domain DA456_RS07900 PF02743 Cache domain DA456_RS07900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS07910 PF01131 DNA topoisomerase DA456_RS07910 PF01751 Toprim domain DA456_RS07915 PF01042 Endoribonuclease L-PSP DA456_RS07925 PF00672 HAMP domain DA456_RS07925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS07930 PF00672 HAMP domain DA456_RS07930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS07940 PF13407 Periplasmic binding protein domain DA456_RS07945 PF12729 Four helix bundle sensory module for signal transduction DA456_RS07945 PF00672 HAMP domain DA456_RS07945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS07985 PF07690 Major Facilitator Superfamily DA456_RS08000 PF07715 TonB-dependent Receptor Plug Domain DA456_RS08000 PF00593 TonB dependent receptor DA456_RS08010 PF00551 Formyl transferase DA456_RS08015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DA456_RS08015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DA456_RS08020 PF01266 FAD dependent oxidoreductase DA456_RS08025 PF04267 Sarcosine oxidase, delta subunit family DA456_RS08030 PF17806 Sarcosine oxidase A3 domain DA456_RS08030 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS08030 PF01571 Aminomethyltransferase folate-binding domain DA456_RS08030 PF08669 Glycine cleavage T-protein C-terminal barrel domain DA456_RS08040 PF00672 HAMP domain DA456_RS08040 PF17200 Single Cache domain 2 DA456_RS08040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS08045 PF03466 LysR substrate binding domain DA456_RS08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS08075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS08075 PF08447 PAS fold DA456_RS08075 PF13426 PAS domain DA456_RS08080 PF00296 Luciferase-like monooxygenase DA456_RS08085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA456_RS08090 PF09084 NMT1/THI5 like DA456_RS08095 PF01425 Amidase DA456_RS08100 PF00873 AcrB/AcrD/AcrF family DA456_RS08115 PF02321 Outer membrane efflux protein DA456_RS08120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA456_RS08125 PF01022 Bacterial regulatory protein, arsR family DA456_RS08150 PF08447 PAS fold DA456_RS08150 PF13426 PAS domain DA456_RS08150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS08160 PF08450 SMP-30/Gluconolactonase/LRE-like region DA456_RS08165 PF05853 beta-keto acid cleavage enzyme DA456_RS08175 PF00392 Bacterial regulatory proteins, gntR family DA456_RS08175 PF07729 FCD domain DA456_RS08250 PF00145 C-5 cytosine-specific DNA methylase DA456_RS08275 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain DA456_RS08275 PF00589 Phage integrase family DA456_RS08290 PF00216 Bacterial DNA-binding protein DA456_RS08295 PF01588 Putative tRNA binding domain DA456_RS08295 PF03483 B3/4 domain DA456_RS08295 PF03484 tRNA synthetase B5 domain DA456_RS08295 PF03147 Ferredoxin-fold anticodon binding domain DA456_RS08295 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DA456_RS08300 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DA456_RS08300 PF01409 tRNA synthetases class II core domain (F) DA456_RS08305 PF00453 Ribosomal protein L20 DA456_RS08310 PF01632 Ribosomal protein L35 DA456_RS08315 PF00707 Translation initiation factor IF-3, C-terminal domain DA456_RS08315 PF05198 Translation initiation factor IF-3, N-terminal domain DA456_RS08320 PF02824 TGS domain DA456_RS08320 PF03129 Anticodon binding domain DA456_RS08320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA456_RS08320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DA456_RS08330 PF00313 'Cold-shock' DNA-binding domain DA456_RS08345 PF01156 Inosine-uridine preferring nucleoside hydrolase DA456_RS08350 PF05025 RbsD / FucU transport protein family DA456_RS08355 PF00294 pfkB family carbohydrate kinase DA456_RS08360 PF00356 Bacterial regulatory proteins, lacI family DA456_RS08365 PF02653 Branched-chain amino acid transport system / permease component DA456_RS08370 PF00005 ABC transporter DA456_RS08375 PF13407 Periplasmic binding protein domain DA456_RS08390 PF04231 Endonuclease I DA456_RS08400 PF00557 Metallopeptidase family M24 DA456_RS08415 PF02615 Malate/L-lactate dehydrogenase DA456_RS08435 PF00999 Sodium/hydrogen exchanger family DA456_RS08435 PF02254 TrkA-N domain DA456_RS08440 PF00535 Glycosyl transferase family 2 DA456_RS08445 PF03454 MoeA C-terminal region (domain IV) DA456_RS08445 PF03453 MoeA N-terminal region (domain I and II) DA456_RS08445 PF00994 Probable molybdopterin binding domain DA456_RS08450 PF00994 Probable molybdopterin binding domain DA456_RS08455 PF12804 MobA-like NTP transferase domain DA456_RS08465 PF00849 RNA pseudouridylate synthase DA456_RS08470 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DA456_RS08470 PF08501 Shikimate dehydrogenase substrate binding domain DA456_RS08475 PF00440 Bacterial regulatory proteins, tetR family DA456_RS08475 PF17938 Tetracyclin repressor-like, C-terminal domain DA456_RS08480 PF01261 Xylose isomerase-like TIM barrel DA456_RS08480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA456_RS08485 PF07690 Major Facilitator Superfamily DA456_RS08495 PF03573 outer membrane porin, OprD family DA456_RS08500 PF02627 Carboxymuconolactone decarboxylase family DA456_RS08505 PF00206 Lyase DA456_RS08505 PF10397 Adenylosuccinate lyase C-terminus DA456_RS08510 PF07690 Major Facilitator Superfamily DA456_RS08515 PF00775 Dioxygenase DA456_RS08520 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DA456_RS08520 PF00775 Dioxygenase DA456_RS08525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS08525 PF03466 LysR substrate binding domain DA456_RS08535 PF01757 Acyltransferase family DA456_RS08555 PF01966 HD domain DA456_RS08560 PF00158 Sigma-54 interaction domain DA456_RS08560 PF00072 Response regulator receiver domain DA456_RS08560 PF02954 Bacterial regulatory protein, Fis family DA456_RS08565 PF00196 Bacterial regulatory proteins, luxR family DA456_RS08565 PF00072 Response regulator receiver domain DA456_RS08570 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS08570 PF00072 Response regulator receiver domain DA456_RS08570 PF00989 PAS fold DA456_RS08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS08570 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS08570 PF01627 Hpt domain DA456_RS08575 PF04320 Protein with unknown function (DUF469) DA456_RS08580 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DA456_RS08585 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS08590 PF01170 Putative RNA methylase family UPF0020 DA456_RS08590 PF10672 S-adenosylmethionine-dependent methyltransferase DA456_RS08590 PF02926 THUMP domain DA456_RS08595 PF04957 Ribosome modulation factor DA456_RS08600 PF01180 Dihydroorotate dehydrogenase DA456_RS08605 PF00005 ABC transporter DA456_RS08610 PF03861 ANTAR domain DA456_RS08610 PF08376 Nitrate and nitrite sensing DA456_RS08615 PF02435 Levansucrase/Invertase DA456_RS08620 PF07690 Major Facilitator Superfamily DA456_RS08625 PF00069 Protein kinase domain DA456_RS08625 PF03793 PASTA domain DA456_RS08630 PF18267 Rubredoxin NAD+ reductase C-terminal domain DA456_RS08630 PF04324 BFD-like [2Fe-2S] binding domain DA456_RS08630 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DA456_RS08630 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DA456_RS08630 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS08635 PF00384 Molybdopterin oxidoreductase DA456_RS08635 PF01568 Molydopterin dinucleotide binding domain DA456_RS08635 PF04324 BFD-like [2Fe-2S] binding domain DA456_RS08635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DA456_RS08640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA456_RS08645 PF05736 OprF membrane domain DA456_RS08645 PF00691 OmpA family DA456_RS08655 PF05552 Conserved TM helix DA456_RS08665 PF01544 CorA-like Mg2+ transporter protein DA456_RS08670 PF03737 Aldolase/RraA DA456_RS08680 PF00391 PEP-utilising enzyme, mobile domain DA456_RS08680 PF02896 PEP-utilising enzyme, TIM barrel domain DA456_RS08680 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DA456_RS08685 PF03618 Kinase/pyrophosphorylase DA456_RS08690 PF04303 PrpF protein DA456_RS08700 PF00694 Aconitase C-terminal domain DA456_RS08700 PF00330 Aconitase family (aconitate hydratase) DA456_RS08705 PF00285 Citrate synthase, C-terminal domain DA456_RS08715 PF00392 Bacterial regulatory proteins, gntR family DA456_RS08715 PF07729 FCD domain DA456_RS08720 PF08443 RimK-like ATP-grasp domain DA456_RS08720 PF18030 RimK PreATP-grasp domain DA456_RS08735 PF04715 Anthranilate synthase component I, N terminal region DA456_RS08735 PF00425 chorismate binding enzyme DA456_RS08745 PF01507 Phosphoadenosine phosphosulfate reductase family DA456_RS08750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS08750 PF03466 LysR substrate binding domain DA456_RS08765 PF08546 Ketopantoate reductase PanE/ApbA C terminal DA456_RS08765 PF02558 Ketopantoate reductase PanE/ApbA DA456_RS08770 PF00793 DAHP synthetase I family DA456_RS08780 PF11839 Alanine-zipper, major outer membrane lipoprotein DA456_RS08785 PF17969 L,D-transpeptidase C-terminal domain DA456_RS08785 PF03734 L,D-transpeptidase catalytic domain DA456_RS08795 PF13472 GDSL-like Lipase/Acylhydrolase family DA456_RS08800 PF00005 ABC transporter DA456_RS08810 PF03449 Transcription elongation factor, N-terminal DA456_RS08810 PF01272 Transcription elongation factor, GreA/GreB, C-term DA456_RS08825 PF07681 DoxX DA456_RS08835 PF01026 TatD related DNase DA456_RS08840 PF00672 HAMP domain DA456_RS08840 PF12729 Four helix bundle sensory module for signal transduction DA456_RS08840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS08860 PF13559 Domain of unknown function (DUF4129) DA456_RS08860 PF11992 Domain of unknown function (DUF3488) DA456_RS08860 PF01841 Transglutaminase-like superfamily DA456_RS08870 PF07726 ATPase family associated with various cellular activities (AAA) DA456_RS08870 PF17863 AAA lid domain DA456_RS08880 PF00072 Response regulator receiver domain DA456_RS08880 PF00486 Transcriptional regulatory protein, C terminal DA456_RS08885 PF13492 GAF domain DA456_RS08885 PF02702 Osmosensitive K+ channel His kinase sensor domain DA456_RS08885 PF13493 Domain of unknown function (DUF4118) DA456_RS08885 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS08885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS08890 PF02669 K+-transporting ATPase, c chain DA456_RS08900 PF03814 Potassium-transporting ATPase A subunit DA456_RS08910 PF03472 Autoinducer binding domain DA456_RS08910 PF00196 Bacterial regulatory proteins, luxR family DA456_RS08950 PF02753 Pili assembly chaperone PapD, C-terminal domain DA456_RS08950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DA456_RS08955 PF13953 PapC C-terminal domain DA456_RS08955 PF13954 PapC N-terminal domain DA456_RS08955 PF00577 Outer membrane usher protein DA456_RS08970 PF03797 Autotransporter beta-domain DA456_RS08970 PF13018 Extended Signal Peptide of Type V secretion system DA456_RS08970 PF03212 Pertactin DA456_RS08970 PF16168 Adhesin of bacterial autotransporter system, probable stalk DA456_RS08980 PF00072 Response regulator receiver domain DA456_RS08980 PF00486 Transcriptional regulatory protein, C terminal DA456_RS08985 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS08985 PF00672 HAMP domain DA456_RS08985 PF16527 Two-component sensor protein CpxA, periplasmic domain DA456_RS08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS08990 PF01594 AI-2E family transporter DA456_RS09000 PF12697 Alpha/beta hydrolase family DA456_RS09010 PF03061 Thioesterase superfamily DA456_RS09015 PF00300 Histidine phosphatase superfamily (branch 1) DA456_RS09025 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DA456_RS09025 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DA456_RS09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS09030 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS09030 PF01627 Hpt domain DA456_RS09030 PF00072 Response regulator receiver domain DA456_RS09030 PF00672 HAMP domain DA456_RS09030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DA456_RS09035 PF07977 FabA-like domain DA456_RS09040 PF00109 Beta-ketoacyl synthase, N-terminal domain DA456_RS09040 PF02801 Beta-ketoacyl synthase, C-terminal domain DA456_RS09050 PF00183 Hsp90 protein DA456_RS09050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS09060 PF05525 Branched-chain amino acid transport protein DA456_RS09070 PF00549 CoA-ligase DA456_RS09070 PF02629 CoA binding domain DA456_RS09075 PF00549 CoA-ligase DA456_RS09075 PF08442 ATP-grasp domain DA456_RS09080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA456_RS09080 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS09085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DA456_RS09085 PF00364 Biotin-requiring enzyme DA456_RS09085 PF02817 e3 binding domain DA456_RS09090 PF16078 2-oxoglutarate dehydrogenase N-terminus DA456_RS09090 PF00676 Dehydrogenase E1 component DA456_RS09090 PF02779 Transketolase, pyrimidine binding domain DA456_RS09090 PF16870 2-oxoglutarate dehydrogenase C-terminal DA456_RS09095 PF13085 2Fe-2S iron-sulfur cluster binding domain DA456_RS09100 PF00890 FAD binding domain DA456_RS09100 PF02910 Fumarate reductase flavoprotein C-term DA456_RS09105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DA456_RS09110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DA456_RS09115 PF00285 Citrate synthase, C-terminal domain DA456_RS09120 PF01852 START domain DA456_RS09125 PF03692 Putative zinc- or iron-chelating domain DA456_RS09135 PF00392 Bacterial regulatory proteins, gntR family DA456_RS09135 PF00155 Aminotransferase class I and II DA456_RS09140 PF00691 OmpA family DA456_RS09155 PF01012 Electron transfer flavoprotein domain DA456_RS09155 PF00766 Electron transfer flavoprotein FAD-binding domain DA456_RS09160 PF01012 Electron transfer flavoprotein domain DA456_RS09170 PF12833 Helix-turn-helix domain DA456_RS09170 PF06719 AraC-type transcriptional regulator N-terminus DA456_RS09175 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS09175 PF00107 Zinc-binding dehydrogenase DA456_RS09180 PF01614 Bacterial transcriptional regulator DA456_RS09180 PF09339 IclR helix-turn-helix domain DA456_RS09185 PF07690 Major Facilitator Superfamily DA456_RS09190 PF13378 Enolase C-terminal domain-like DA456_RS09190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DA456_RS09195 PF01081 KDPG and KHG aldolase DA456_RS09200 PF05035 2-keto-3-deoxy-galactonokinase DA456_RS09205 PF01118 Semialdehyde dehydrogenase, NAD binding domain DA456_RS09205 PF02774 Semialdehyde dehydrogenase, dimerisation domain DA456_RS09210 PF00180 Isocitrate/isopropylmalate dehydrogenase DA456_RS09215 PF00694 Aconitase C-terminal domain DA456_RS09220 PF00330 Aconitase family (aconitate hydratase) DA456_RS09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS09230 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS09230 PF03707 Bacterial signalling protein N terminal repeat DA456_RS09230 PF00563 EAL domain DA456_RS09235 PF00011 Hsp20/alpha crystallin family DA456_RS09240 PF01207 Dihydrouridine synthase (Dus) DA456_RS09270 PF00749 tRNA synthetases class I (E and Q), catalytic domain DA456_RS09285 PF02151 UvrB/uvrC motif DA456_RS09285 PF12344 Ultra-violet resistance protein B DA456_RS09285 PF17757 UvrB interaction domain DA456_RS09285 PF00271 Helicase conserved C-terminal domain DA456_RS09285 PF04851 Type III restriction enzyme, res subunit DA456_RS09290 PF00155 Aminotransferase class I and II DA456_RS09300 PF01804 Penicillin amidase DA456_RS09305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS09310 PF12704 MacB-like periplasmic core domain DA456_RS09310 PF02687 FtsX-like permease family DA456_RS09310 PF00005 ABC transporter DA456_RS09315 PF02321 Outer membrane efflux protein DA456_RS09345 PF00664 ABC transporter transmembrane region DA456_RS09345 PF00005 ABC transporter DA456_RS09350 PF07660 Secretin and TonB N terminus short domain DA456_RS09350 PF07715 TonB-dependent Receptor Plug Domain DA456_RS09350 PF00593 TonB dependent receptor DA456_RS09355 PF07715 TonB-dependent Receptor Plug Domain DA456_RS09355 PF07660 Secretin and TonB N terminus short domain DA456_RS09355 PF00593 TonB dependent receptor DA456_RS09360 PF00668 Condensation domain DA456_RS09360 PF13193 AMP-binding enzyme C-terminal domain DA456_RS09360 PF00501 AMP-binding enzyme DA456_RS09360 PF00550 Phosphopantetheine attachment site DA456_RS09365 PF00975 Thioesterase domain DA456_RS09365 PF00501 AMP-binding enzyme DA456_RS09365 PF13193 AMP-binding enzyme C-terminal domain DA456_RS09365 PF00550 Phosphopantetheine attachment site DA456_RS09365 PF00668 Condensation domain DA456_RS09370 PF00550 Phosphopantetheine attachment site DA456_RS09370 PF00668 Condensation domain DA456_RS09370 PF00501 AMP-binding enzyme DA456_RS09370 PF13193 AMP-binding enzyme C-terminal domain DA456_RS09375 PF00501 AMP-binding enzyme DA456_RS09375 PF00550 Phosphopantetheine attachment site DA456_RS09375 PF00668 Condensation domain DA456_RS09375 PF13193 AMP-binding enzyme C-terminal domain DA456_RS09380 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DA456_RS09410 PF00005 ABC transporter DA456_RS09415 PF00950 ABC 3 transport family DA456_RS09425 PF03621 MbtH-like protein DA456_RS09430 PF00202 Aminotransferase class-III DA456_RS09435 PF00550 Phosphopantetheine attachment site DA456_RS09435 PF00668 Condensation domain DA456_RS09435 PF13193 AMP-binding enzyme C-terminal domain DA456_RS09435 PF00501 AMP-binding enzyme DA456_RS09440 PF00975 Thioesterase domain DA456_RS09455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS09455 PF07730 Histidine kinase DA456_RS09455 PF05384 Sensor protein DegS DA456_RS09460 PF00072 Response regulator receiver domain DA456_RS09460 PF00196 Bacterial regulatory proteins, luxR family DA456_RS09465 PF13426 PAS domain DA456_RS09465 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS09465 PF13188 PAS domain DA456_RS09465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS09465 PF00989 PAS fold DA456_RS09470 PF00072 Response regulator receiver domain DA456_RS09475 PF00582 Universal stress protein family DA456_RS09480 PF01207 Dihydrouridine synthase (Dus) DA456_RS09485 PF03466 LysR substrate binding domain DA456_RS09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS09500 PF00202 Aminotransferase class-III DA456_RS09510 PF05977 Transmembrane secretion effector DA456_RS09535 PF00989 PAS fold DA456_RS09535 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS09535 PF18698 Histidine kinase sensor domain DA456_RS09535 PF00672 HAMP domain DA456_RS09545 PF00717 Peptidase S24-like DA456_RS09550 PF07687 Peptidase dimerisation domain DA456_RS09550 PF01546 Peptidase family M20/M25/M40 DA456_RS09555 PF00593 TonB dependent receptor DA456_RS09555 PF07660 Secretin and TonB N terminus short domain DA456_RS09555 PF07715 TonB-dependent Receptor Plug Domain DA456_RS09560 PF00923 Transaldolase/Fructose-6-phosphate aldolase DA456_RS09570 PF00196 Bacterial regulatory proteins, luxR family DA456_RS09570 PF00072 Response regulator receiver domain DA456_RS09580 PF04333 MlaA lipoprotein DA456_RS09595 PF14489 QueF-like protein DA456_RS09595 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DA456_RS09600 PF12704 MacB-like periplasmic core domain DA456_RS09600 PF02687 FtsX-like permease family DA456_RS09605 PF00005 ABC transporter DA456_RS09610 PF12704 MacB-like periplasmic core domain DA456_RS09610 PF02687 FtsX-like permease family DA456_RS09620 PF03009 Glycerophosphoryl diester phosphodiesterase family DA456_RS09625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA456_RS09625 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS09630 PF02424 ApbE family DA456_RS09635 PF07690 Major Facilitator Superfamily DA456_RS09645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DA456_RS09645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DA456_RS09650 PF02559 CarD-like/TRCF domain DA456_RS09650 PF00271 Helicase conserved C-terminal domain DA456_RS09650 PF03461 TRCF domain DA456_RS09650 PF00270 DEAD/DEAH box helicase DA456_RS09650 PF17757 UvrB interaction domain DA456_RS09660 PF00271 Helicase conserved C-terminal domain DA456_RS09660 PF00176 SNF2 family N-terminal domain DA456_RS09660 PF12419 SNF2 Helicase protein DA456_RS09665 PF00857 Isochorismatase family DA456_RS09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS09685 PF03466 LysR substrate binding domain DA456_RS09715 PF00034 Cytochrome c DA456_RS09745 PF01544 CorA-like Mg2+ transporter protein DA456_RS09750 PF00117 Glutamine amidotransferase class-I DA456_RS09750 PF00958 GMP synthase C terminal domain DA456_RS09750 PF02540 NAD synthase DA456_RS09760 PF08379 Bacterial transglutaminase-like N-terminal region DA456_RS09760 PF01841 Transglutaminase-like superfamily DA456_RS09765 PF14403 Circularly permuted ATP-grasp type 2 DA456_RS09765 PF04168 A predicted alpha-helical domain with a conserved ER motif. DA456_RS09770 PF14403 Circularly permuted ATP-grasp type 2 DA456_RS09790 PF00884 Sulfatase DA456_RS09795 PF17284 Spermidine synthase tetramerisation domain DA456_RS09805 PF02535 ZIP Zinc transporter DA456_RS09815 PF12796 Ankyrin repeats (3 copies) DA456_RS09815 PF00023 Ankyrin repeat DA456_RS09825 PF00196 Bacterial regulatory proteins, luxR family DA456_RS09825 PF03472 Autoinducer binding domain DA456_RS09835 PF03079 ARD/ARD' family DA456_RS09840 PF00596 Class II Aldolase and Adducin N-terminal domain DA456_RS09845 PF12832 MFS_1 like family DA456_RS09850 PF01264 Chorismate synthase DA456_RS09865 PF05175 Methyltransferase small domain DA456_RS09880 PF01713 Smr domain DA456_RS09900 PF01227 GTP cyclohydrolase I DA456_RS09915 PF02798 Glutathione S-transferase, N-terminal domain DA456_RS09920 PF00155 Aminotransferase class I and II DA456_RS09930 PF03594 Benzoate membrane transport protein DA456_RS09935 PF17676 LD-carboxypeptidase C-terminal domain DA456_RS09935 PF02016 LD-carboxypeptidase N-terminal domain DA456_RS09940 PF16884 N-terminal domain of oxidoreductase DA456_RS09940 PF00107 Zinc-binding dehydrogenase DA456_RS09945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DA456_RS09970 PF06865 Pyrimidine/purine nucleoside phosphorylase DA456_RS09975 PF00005 ABC transporter DA456_RS09975 PF00664 ABC transporter transmembrane region DA456_RS09985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA456_RS09985 PF11890 Domain of unknown function (DUF3410) DA456_RS09985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA456_RS09990 PF01206 Sulfurtransferase TusA DA456_RS09995 PF02575 YbaB/EbfC DNA-binding family DA456_RS10000 PF12169 DNA polymerase III subunits gamma and tau domain III DA456_RS10000 PF12170 DNA polymerase III tau subunit V interacting with alpha DA456_RS10000 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DA456_RS10010 PF04185 Phosphoesterase family DA456_RS10015 PF00924 Mechanosensitive ion channel DA456_RS10025 PF00583 Acetyltransferase (GNAT) family DA456_RS10030 PF15887 Putative zinc-binding metallo-peptidase DA456_RS10030 PF10005 zinc-ribbon domain DA456_RS10040 PF03120 NAD-dependent DNA ligase OB-fold domain DA456_RS10040 PF01653 NAD-dependent DNA ligase adenylation domain DA456_RS10040 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DA456_RS10040 PF12826 Helix-hairpin-helix motif DA456_RS10040 PF00533 BRCA1 C Terminus (BRCT) domain DA456_RS10045 PF04354 ZipA, C-terminal FtsZ-binding domain DA456_RS10050 PF02463 RecF/RecN/SMC N terminal domain DA456_RS10060 PF01799 [2Fe-2S] binding domain DA456_RS10060 PF00111 2Fe-2S iron-sulfur cluster binding domain DA456_RS10065 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DA456_RS10065 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DA456_RS10075 PF01979 Amidohydrolase family DA456_RS10085 PF00576 HIUase/Transthyretin family DA456_RS10090 PF01522 Polysaccharide deacetylase DA456_RS10095 PF01014 Uricase DA456_RS10095 PF09349 OHCU decarboxylase DA456_RS10100 PF03561 Allantoicase repeat DA456_RS10105 PF04115 Ureidoglycolate lyase DA456_RS10120 PF05661 Protein of unknown function (DUF808) DA456_RS10125 PF01037 Lrp/AsnC ligand binding domain DA456_RS10130 PF00291 Pyridoxal-phosphate dependent enzyme DA456_RS10145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS10145 PF03466 LysR substrate binding domain DA456_RS10155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS10155 PF16591 Helical bimodular sensor domain DA456_RS10155 PF00672 HAMP domain DA456_RS10170 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DA456_RS10175 PF00668 Condensation domain DA456_RS10175 PF00501 AMP-binding enzyme DA456_RS10175 PF13193 AMP-binding enzyme C-terminal domain DA456_RS10175 PF00550 Phosphopantetheine attachment site DA456_RS10175 PF00975 Thioesterase domain DA456_RS10180 PF00550 Phosphopantetheine attachment site DA456_RS10180 PF00668 Condensation domain DA456_RS10180 PF13193 AMP-binding enzyme C-terminal domain DA456_RS10180 PF00501 AMP-binding enzyme DA456_RS10185 PF00668 Condensation domain DA456_RS10185 PF00501 AMP-binding enzyme DA456_RS10185 PF13193 AMP-binding enzyme C-terminal domain DA456_RS10185 PF00975 Thioesterase domain DA456_RS10185 PF00550 Phosphopantetheine attachment site DA456_RS10200 PF00248 Aldo/keto reductase family DA456_RS10205 PF00672 HAMP domain DA456_RS10205 PF12729 Four helix bundle sensory module for signal transduction DA456_RS10205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS10210 PF07690 Major Facilitator Superfamily DA456_RS10220 PF07995 Glucose / Sorbosone dehydrogenase DA456_RS10235 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DA456_RS10240 PF00593 TonB dependent receptor DA456_RS10240 PF07715 TonB-dependent Receptor Plug Domain DA456_RS10245 PF06594 Haemolysin-type calcium binding protein related domain DA456_RS10245 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DA456_RS10265 PF14310 Fibronectin type III-like domain DA456_RS10265 PF00933 Glycosyl hydrolase family 3 N terminal domain DA456_RS10265 PF01915 Glycosyl hydrolase family 3 C-terminal domain DA456_RS10280 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS10280 PF08448 PAS fold DA456_RS10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS10280 PF00072 Response regulator receiver domain DA456_RS10280 PF13188 PAS domain DA456_RS10285 PF08362 YcdC-like protein, C-terminal region DA456_RS10285 PF00440 Bacterial regulatory proteins, tetR family DA456_RS10290 PF00672 HAMP domain DA456_RS10290 PF17200 Single Cache domain 2 DA456_RS10290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS10295 PF00248 Aldo/keto reductase family DA456_RS10305 PF01384 Phosphate transporter family DA456_RS10310 PF13533 Biotin-lipoyl like DA456_RS10325 PF00378 Enoyl-CoA hydratase/isomerase DA456_RS10330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS10330 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS10330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS10340 PF03358 NADPH-dependent FMN reductase DA456_RS10355 PF00929 Exonuclease DA456_RS10360 PF00075 RNase H DA456_RS10370 PF16123 Hydroxyacylglutathione hydrolase C-terminus DA456_RS10370 PF00753 Metallo-beta-lactamase superfamily DA456_RS10375 PF01476 LysM domain DA456_RS10375 PF01464 Transglycosylase SLT domain DA456_RS10380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS10385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS10390 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS10395 PF12911 N-terminal TM domain of oligopeptide transport permease C DA456_RS10395 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS10400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS10400 PF00005 ABC transporter DA456_RS10415 PF01638 HxlR-like helix-turn-helix DA456_RS10420 PF13145 PPIC-type PPIASE domain DA456_RS10425 PF00216 Bacterial DNA-binding protein DA456_RS10430 PF02190 ATP-dependent protease La (LON) substrate-binding domain DA456_RS10430 PF05362 Lon protease (S16) C-terminal proteolytic domain DA456_RS10430 PF00004 ATPase family associated with various cellular activities (AAA) DA456_RS10435 PF10431 C-terminal, D2-small domain, of ClpB protein DA456_RS10435 PF07724 AAA domain (Cdc48 subfamily) DA456_RS10435 PF06689 ClpX C4-type zinc finger DA456_RS10440 PF00574 Clp protease DA456_RS10445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DA456_RS10445 PF05697 Bacterial trigger factor protein (TF) DA456_RS10445 PF05698 Bacterial trigger factor protein (TF) C-terminus DA456_RS10475 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DA456_RS10475 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DA456_RS10490 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS10495 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS10500 PF08402 TOBE domain DA456_RS10500 PF00005 ABC transporter DA456_RS10505 PF00005 ABC transporter DA456_RS10505 PF17912 MalK OB fold domain DA456_RS10510 PF01590 GAF domain DA456_RS10510 PF02954 Bacterial regulatory protein, Fis family DA456_RS10510 PF00158 Sigma-54 interaction domain DA456_RS10515 PF09190 DALR domain DA456_RS10515 PF01406 tRNA synthetases class I (C) catalytic domain DA456_RS10520 PF00749 tRNA synthetases class I (E and Q), catalytic domain DA456_RS10520 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DA456_RS10525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DA456_RS10530 PF00149 Calcineurin-like phosphoesterase DA456_RS10540 PF07690 Major Facilitator Superfamily DA456_RS10545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS10545 PF00529 HlyD membrane-fusion protein of T1SS DA456_RS10550 PF01047 MarR family DA456_RS10555 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DA456_RS10565 PF00330 Aconitase family (aconitate hydratase) DA456_RS10565 PF06434 Aconitate hydratase 2 N-terminus DA456_RS10565 PF11791 Aconitate B N-terminal domain DA456_RS10570 PF02659 Putative manganese efflux pump DA456_RS10575 PF05088 Bacterial NAD-glutamate dehydrogenase DA456_RS10590 PF07726 ATPase family associated with various cellular activities (AAA) DA456_RS10590 PF17863 AAA lid domain DA456_RS10595 PF01882 Protein of unknown function DUF58 DA456_RS10605 PF07584 Aerotolerance regulator N-terminal DA456_RS10605 PF00092 von Willebrand factor type A domain DA456_RS10620 PF12320 Type 5 capsule protein repressor C-terminal domain DA456_RS10620 PF00149 Calcineurin-like phosphoesterase DA456_RS10640 PF10282 Lactonase, 7-bladed beta-propeller DA456_RS10655 PF07690 Major Facilitator Superfamily DA456_RS10660 PF00920 Dehydratase family DA456_RS10665 PF00392 Bacterial regulatory proteins, gntR family DA456_RS10705 PF07044 Protein of unknown function (DUF1329) DA456_RS10710 PF03738 Glutathionylspermidine synthase preATP-grasp DA456_RS10720 PF03994 Domain of Unknown Function (DUF350) DA456_RS10730 PF01694 Rhomboid family DA456_RS10745 PF02371 Transposase IS116/IS110/IS902 family DA456_RS10745 PF01548 Transposase DA456_RS10750 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DA456_RS10750 PF01433 Peptidase family M1 domain DA456_RS10750 PF11940 Domain of unknown function (DUF3458) Ig-like fold DA456_RS10760 PF07023 Protein of unknown function (DUF1315) DA456_RS10765 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DA456_RS10765 PF01694 Rhomboid family DA456_RS10770 PF00149 Calcineurin-like phosphoesterase DA456_RS10775 PF01513 ATP-NAD kinase DA456_RS10780 PF08448 PAS fold DA456_RS10780 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS10795 PF02040 Arsenical pump membrane protein DA456_RS10800 PF07690 Major Facilitator Superfamily DA456_RS10805 PF08946 Osmosensory transporter coiled coil DA456_RS10805 PF00083 Sugar (and other) transporter DA456_RS10815 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS10815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA456_RS10825 PF12833 Helix-turn-helix domain DA456_RS10825 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DA456_RS10835 PF00291 Pyridoxal-phosphate dependent enzyme DA456_RS10835 PF00585 C-terminal regulatory domain of Threonine dehydratase DA456_RS10865 PF01053 Cys/Met metabolism PLP-dependent enzyme DA456_RS10870 PF00156 Phosphoribosyl transferase domain DA456_RS10875 PF02674 Colicin V production protein DA456_RS10885 PF02875 Mur ligase family, glutamate ligase domain DA456_RS10885 PF08245 Mur ligase middle domain DA456_RS10890 PF17848 Acetyl-coA carboxylase zinc finger domain DA456_RS10890 PF01039 Carboxyl transferase domain DA456_RS10895 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DA456_RS10900 PF01416 tRNA pseudouridine synthase DA456_RS10910 PF02774 Semialdehyde dehydrogenase, dimerisation domain DA456_RS10910 PF01118 Semialdehyde dehydrogenase, NAD binding domain DA456_RS10925 PF00440 Bacterial regulatory proteins, tetR family DA456_RS10935 PF01026 TatD related DNase DA456_RS10945 PF09115 DNA polymerase III, delta subunit, C terminal DA456_RS10950 PF02223 Thymidylate kinase DA456_RS10955 PF02618 YceG-like family DA456_RS10960 PF01063 Amino-transferase class IV DA456_RS10965 PF00109 Beta-ketoacyl synthase, N-terminal domain DA456_RS10965 PF02801 Beta-ketoacyl synthase, C-terminal domain DA456_RS10970 PF00550 Phosphopantetheine attachment site DA456_RS10980 PF00698 Acyl transferase domain DA456_RS10985 PF02504 Fatty acid synthesis protein DA456_RS10990 PF01783 Ribosomal L32p protein family DA456_RS10995 PF02620 Large ribosomal RNA subunit accumulation protein YceD DA456_RS11000 PF02545 Maf-like protein DA456_RS11005 PF01343 Peptidase family S49 DA456_RS11005 PF06965 Na+/H+ antiporter 1 DA456_RS11015 PF00849 RNA pseudouridylate synthase DA456_RS11015 PF01479 S4 domain DA456_RS11020 PF00575 S1 RNA binding domain DA456_RS11020 PF12111 Polyribonucleotide phosphorylase C terminal DA456_RS11020 PF10150 Ribonuclease E/G family DA456_RS11025 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DA456_RS11025 PF01565 FAD binding domain DA456_RS11030 PF02348 Cytidylyltransferase DA456_RS11035 PF03966 Trm112p-like protein DA456_RS11040 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DA456_RS11045 PF02472 Biopolymer transport protein ExbD/TolR DA456_RS11050 PF01618 MotA/TolQ/ExbB proton channel family DA456_RS11055 PF00753 Metallo-beta-lactamase superfamily DA456_RS11055 PF03772 Competence protein DA456_RS11060 PF01061 ABC-2 type transporter DA456_RS11065 PF00005 ABC transporter DA456_RS11070 PF00043 Glutathione S-transferase, C-terminal domain DA456_RS11070 PF13417 Glutathione S-transferase, N-terminal domain DA456_RS11075 PF09317 Domain of unknown function (DUF1974) DA456_RS11075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS11075 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS11075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS11085 PF05726 Pirin C-terminal cupin domain DA456_RS11085 PF02678 Pirin DA456_RS11095 PF03279 Bacterial lipid A biosynthesis acyltransferase DA456_RS11100 PF05209 Septum formation inhibitor MinC, N-terminal domain DA456_RS11100 PF03775 Septum formation inhibitor MinC, C-terminal domain DA456_RS11105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DA456_RS11110 PF03776 Septum formation topological specificity factor MinE DA456_RS11115 PF00849 RNA pseudouridylate synthase DA456_RS11120 PF02127 Aminopeptidase I zinc metalloprotease (M18) DA456_RS11130 PF00392 Bacterial regulatory proteins, gntR family DA456_RS11130 PF07702 UTRA domain DA456_RS11155 PF08402 TOBE domain DA456_RS11155 PF00005 ABC transporter DA456_RS11165 PF00698 Acyl transferase domain DA456_RS11165 PF14765 Polyketide synthase dehydratase DA456_RS11165 PF00550 Phosphopantetheine attachment site DA456_RS11165 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS11165 PF08659 KR domain DA456_RS11170 PF00595 PDZ domain DA456_RS11170 PF03572 Peptidase family S41 DA456_RS11170 PF17804 Tail specific protease N-terminal domain DA456_RS11170 PF11818 C-terminal domain of tail specific protease (DUF3340) DA456_RS11195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DA456_RS11195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DA456_RS11210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA456_RS11215 PF02515 CoA-transferase family III DA456_RS11235 PF04381 Putative exonuclease, RdgC DA456_RS11240 PF01758 Sodium Bile acid symporter family DA456_RS11245 PF07690 Major Facilitator Superfamily DA456_RS11250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS11250 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS11260 PF00291 Pyridoxal-phosphate dependent enzyme DA456_RS11280 PF02861 Clp amino terminal domain, pathogenicity island component DA456_RS11280 PF17871 AAA lid domain DA456_RS11280 PF10431 C-terminal, D2-small domain, of ClpB protein DA456_RS11280 PF00004 ATPase family associated with various cellular activities (AAA) DA456_RS11280 PF07724 AAA domain (Cdc48 subfamily) DA456_RS11300 PF13230 Glutamine amidotransferases class-II DA456_RS11310 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DA456_RS11310 PF00326 Prolyl oligopeptidase family DA456_RS11320 PF01844 HNH endonuclease DA456_RS11325 PF07732 Multicopper oxidase DA456_RS11325 PF07731 Multicopper oxidase DA456_RS11325 PF00394 Multicopper oxidase DA456_RS11330 PF05275 Copper resistance protein B precursor (CopB) DA456_RS11345 PF03692 Putative zinc- or iron-chelating domain DA456_RS11350 PF00881 Nitroreductase family DA456_RS11355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA456_RS11360 PF05166 YcgL domain DA456_RS11365 PF00570 HRDC domain DA456_RS11365 PF01612 3'-5' exonuclease DA456_RS11370 PF08019 Phosphoethanolamine transferase EptA/EptB DA456_RS11370 PF00884 Sulfatase DA456_RS11375 PF03949 Malic enzyme, NAD binding domain DA456_RS11375 PF00390 Malic enzyme, N-terminal domain DA456_RS11390 PF03466 LysR substrate binding domain DA456_RS11390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS11395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA456_RS11415 PF00589 Phage integrase family DA456_RS11425 PF01259 SAICAR synthetase DA456_RS11430 PF00753 Metallo-beta-lactamase superfamily DA456_RS11435 PF06804 NlpB/DapX lipoprotein DA456_RS11440 PF00701 Dihydrodipicolinate synthetase family DA456_RS11450 PF00578 AhpC/TSA family DA456_RS11455 PF01594 AI-2E family transporter DA456_RS11460 PF01206 Sulfurtransferase TusA DA456_RS11465 PF01435 Peptidase family M48 DA456_RS11470 PF02445 Quinolinate synthetase A protein DA456_RS11485 PF08468 Methyltransferase small domain N-terminal DA456_RS11485 PF05175 Methyltransferase small domain DA456_RS11490 PF00589 Phage integrase family DA456_RS11490 PF02899 Phage integrase, N-terminal SAM-like domain DA456_RS11540 PF00893 Small Multidrug Resistance protein DA456_RS11565 PF06508 Queuosine biosynthesis protein QueC DA456_RS11570 PF04055 Radical SAM superfamily DA456_RS11575 PF13525 Outer membrane lipoprotein DA456_RS11575 PF16331 TolA binding protein trimerisation DA456_RS11580 PF00691 OmpA family DA456_RS11585 PF07676 WD40-like Beta Propeller Repeat DA456_RS11585 PF04052 TolB amino-terminal domain DA456_RS11595 PF02472 Biopolymer transport protein ExbD/TolR DA456_RS11600 PF01618 MotA/TolQ/ExbB proton channel family DA456_RS11605 PF03061 Thioesterase superfamily DA456_RS11610 PF17864 RuvB AAA lid domain DA456_RS11610 PF05496 Holliday junction DNA helicase RuvB P-loop domain DA456_RS11610 PF05491 RuvB C-terminal winged helix domain DA456_RS11615 PF01330 RuvA N terminal domain DA456_RS11615 PF07499 RuvA, C-terminal domain DA456_RS11620 PF02075 Crossover junction endodeoxyribonuclease RuvC DA456_RS11625 PF01709 Transcriptional regulator DA456_RS11630 PF02938 GAD domain DA456_RS11630 PF01336 OB-fold nucleic acid binding domain DA456_RS11630 PF00152 tRNA synthetases class II (D, K and N) DA456_RS11640 PF00210 Ferritin-like domain DA456_RS11650 PF00313 'Cold-shock' DNA-binding domain DA456_RS11655 PF04102 SlyX DA456_RS11670 PF03573 outer membrane porin, OprD family DA456_RS11675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA456_RS11675 PF04073 Aminoacyl-tRNA editing domain DA456_RS11675 PF03129 Anticodon binding domain DA456_RS11685 PF11798 IMS family HHH motif DA456_RS11685 PF00817 impB/mucB/samB family DA456_RS11700 PF03706 Lysylphosphatidylglycerol synthase TM region DA456_RS11700 PF09924 Uncharacterised conserved protein (DUF2156) DA456_RS11710 PF02705 K+ potassium transporter DA456_RS11725 PF18693 TRAM domain DA456_RS11725 PF04055 Radical SAM superfamily DA456_RS11725 PF00919 Uncharacterized protein family UPF0004 DA456_RS11730 PF13673 Acetyltransferase (GNAT) domain DA456_RS11735 PF01479 S4 domain DA456_RS11735 PF00849 RNA pseudouridylate synthase DA456_RS11740 PF07308 Protein of unknown function (DUF1456) DA456_RS11745 PF01980 tRNA-methyltransferase O DA456_RS11745 PF18389 TrmO C-terminal domain DA456_RS11750 PF00175 Oxidoreductase NAD-binding domain DA456_RS11750 PF00970 Oxidoreductase FAD-binding domain DA456_RS11755 PF03466 LysR substrate binding domain DA456_RS11755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS11760 PF01219 Prokaryotic diacylglycerol kinase DA456_RS11765 PF00196 Bacterial regulatory proteins, luxR family DA456_RS11765 PF00072 Response regulator receiver domain DA456_RS11775 PF03942 DTW domain DA456_RS11790 PF02631 RecX family DA456_RS11795 PF00154 recA bacterial DNA recombination protein DA456_RS11800 PF02464 Competence-damaged protein DA456_RS11805 PF05192 MutS domain III DA456_RS11805 PF05188 MutS domain II DA456_RS11805 PF01624 MutS domain I DA456_RS11805 PF05190 MutS family domain IV DA456_RS11805 PF00488 MutS domain V DA456_RS11810 PF11953 Domain of unknown function (DUF3470) DA456_RS11810 PF00037 4Fe-4S binding domain DA456_RS11815 PF00140 Sigma-70 factor, region 1.2 DA456_RS11815 PF04545 Sigma-70, region 4 DA456_RS11815 PF04539 Sigma-70 region 3 DA456_RS11815 PF04542 Sigma-70 region 2 DA456_RS11820 PF01476 LysM domain DA456_RS11820 PF01551 Peptidase family M23 DA456_RS11830 PF01975 Survival protein SurE DA456_RS11835 PF01142 tRNA pseudouridine synthase D (TruD) DA456_RS11840 PF02542 YgbB family DA456_RS11845 PF00756 Putative esterase DA456_RS11850 PF00107 Zinc-binding dehydrogenase DA456_RS11850 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS11855 PF03466 LysR substrate binding domain DA456_RS11855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS11860 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DA456_RS11865 PF04977 Septum formation initiator DA456_RS11870 PF00113 Enolase, C-terminal TIM barrel domain DA456_RS11870 PF03952 Enolase, N-terminal domain DA456_RS11875 PF00793 DAHP synthetase I family DA456_RS11880 PF00117 Glutamine amidotransferase class-I DA456_RS11880 PF06418 CTP synthase N-terminus DA456_RS11885 PF11734 TilS substrate C-terminal domain DA456_RS11885 PF09179 TilS substrate binding domain DA456_RS11885 PF01171 PP-loop family DA456_RS11890 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DA456_RS11895 PF02811 PHP domain DA456_RS11895 PF01336 OB-fold nucleic acid binding domain DA456_RS11895 PF07733 Bacterial DNA polymerase III alpha NTPase domain DA456_RS11895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DA456_RS11895 PF14579 Helix-hairpin-helix motif DA456_RS11900 PF01351 Ribonuclease HII DA456_RS11905 PF02684 Lipid-A-disaccharide synthetase DA456_RS11910 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DA456_RS11910 PF00132 Bacterial transferase hexapeptide (six repeats) DA456_RS11915 PF07977 FabA-like domain DA456_RS11920 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DA456_RS11920 PF00132 Bacterial transferase hexapeptide (six repeats) DA456_RS11925 PF03938 Outer membrane protein (OmpH-like) DA456_RS11930 PF01103 Surface antigen DA456_RS11930 PF07244 Surface antigen variable number repeat DA456_RS11935 PF17820 PDZ domain DA456_RS11935 PF02163 Peptidase family M50 DA456_RS11935 PF13180 PDZ domain DA456_RS11940 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DA456_RS11940 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DA456_RS11940 PF13288 DXP reductoisomerase C-terminal domain DA456_RS11950 PF01255 Putative undecaprenyl diphosphate synthase DA456_RS11955 PF01765 Ribosome recycling factor DA456_RS11960 PF00696 Amino acid kinase family DA456_RS11965 PF00889 Elongation factor TS DA456_RS11970 PF00318 Ribosomal protein S2 DA456_RS11975 PF00557 Metallopeptidase family M24 DA456_RS11980 PF08335 GlnD PII-uridylyltransferase DA456_RS11980 PF01966 HD domain DA456_RS11980 PF01909 Nucleotidyltransferase domain DA456_RS11985 PF00155 Aminotransferase class I and II DA456_RS12000 PF03960 ArsC family DA456_RS12005 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DA456_RS12005 PF14602 Hexapeptide repeat of succinyl-transferase DA456_RS12010 PF00266 Aminotransferase class-V DA456_RS12015 PF02657 Fe-S metabolism associated domain DA456_RS12020 PF00899 ThiF family DA456_RS12025 PF00535 Glycosyl transferase family 2 DA456_RS12030 PF07687 Peptidase dimerisation domain DA456_RS12030 PF01546 Peptidase family M20/M25/M40 DA456_RS12035 PF13847 Methyltransferase domain DA456_RS12045 PF01553 Acyltransferase DA456_RS12060 PF04445 Putative SAM-dependent methyltransferase DA456_RS12085 PF00814 Glycoprotease family DA456_RS12090 PF05191 Adenylate kinase, active site lid DA456_RS12100 PF00311 Phosphoenolpyruvate carboxylase DA456_RS12110 PF05736 OprF membrane domain DA456_RS12110 PF00691 OmpA family DA456_RS12120 PF12146 Serine aminopeptidase, S33 DA456_RS12135 PF00152 tRNA synthetases class II (D, K and N) DA456_RS12135 PF01336 OB-fold nucleic acid binding domain DA456_RS12145 PF00563 EAL domain DA456_RS12145 PF01590 GAF domain DA456_RS12145 PF00360 Phytochrome region DA456_RS12145 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS12150 PF00072 Response regulator receiver domain DA456_RS12150 PF01339 CheB methylesterase DA456_RS12155 PF00072 Response regulator receiver domain DA456_RS12155 PF01627 Hpt domain DA456_RS12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS12155 PF01584 CheW-like domain DA456_RS12165 PF01739 CheR methyltransferase, SAM binding domain DA456_RS12175 PF12729 Four helix bundle sensory module for signal transduction DA456_RS12175 PF00672 HAMP domain DA456_RS12175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS12190 PF00072 Response regulator receiver domain DA456_RS12190 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS12190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS12190 PF13188 PAS domain DA456_RS12190 PF08448 PAS fold DA456_RS12195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA456_RS12200 PF01368 DHH family DA456_RS12200 PF02272 DHHA1 domain DA456_RS12200 PF17768 RecJ OB domain DA456_RS12205 PF07152 YaeQ protein DA456_RS12220 PF00196 Bacterial regulatory proteins, luxR family DA456_RS12220 PF00072 Response regulator receiver domain DA456_RS12225 PF00563 EAL domain DA456_RS12225 PF00360 Phytochrome region DA456_RS12225 PF01590 GAF domain DA456_RS12225 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS12230 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS12230 PF01627 Hpt domain DA456_RS12230 PF00989 PAS fold DA456_RS12230 PF00072 Response regulator receiver domain DA456_RS12230 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS12235 PF14821 Threonine synthase N terminus DA456_RS12235 PF00291 Pyridoxal-phosphate dependent enzyme DA456_RS12240 PF00742 Homoserine dehydrogenase DA456_RS12240 PF03447 Homoserine dehydrogenase, NAD binding domain DA456_RS12240 PF01842 ACT domain DA456_RS12245 PF13098 Thioredoxin-like domain DA456_RS12245 PF10411 Disulfide bond isomerase protein N-terminus DA456_RS12250 PF02899 Phage integrase, N-terminal SAM-like domain DA456_RS12250 PF00589 Phage integrase family DA456_RS12255 PF01245 Ribosomal protein L19 DA456_RS12260 PF01746 tRNA (Guanine-1)-methyltransferase DA456_RS12265 PF05239 PRC-barrel domain DA456_RS12265 PF01782 RimM N-terminal domain DA456_RS12270 PF00886 Ribosomal protein S16 DA456_RS12275 PF00448 SRP54-type protein, GTPase domain DA456_RS12275 PF02978 Signal peptide binding domain DA456_RS12275 PF02881 SRP54-type protein, helical bundle domain DA456_RS12285 PF00571 CBS domain DA456_RS12285 PF01595 Cyclin M transmembrane N-terminal domain DA456_RS12285 PF03471 Transporter associated domain DA456_RS12290 PF07690 Major Facilitator Superfamily DA456_RS12290 PF00083 Sugar (and other) transporter DA456_RS12295 PF02222 ATP-grasp domain DA456_RS12310 PF00132 Bacterial transferase hexapeptide (six repeats) DA456_RS12315 PF00293 NUDIX domain DA456_RS12325 PF09297 NADH pyrophosphatase zinc ribbon domain DA456_RS12325 PF00293 NUDIX domain DA456_RS12340 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DA456_RS12340 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DA456_RS12340 PF02769 AIR synthase related protein, C-terminal domain DA456_RS12345 PF01464 Transglycosylase SLT domain DA456_RS12345 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS12350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DA456_RS12355 PF07731 Multicopper oxidase DA456_RS12355 PF07732 Multicopper oxidase DA456_RS12370 PF14552 Tautomerase enzyme DA456_RS12375 PF03060 Nitronate monooxygenase DA456_RS12380 PF00042 Globin DA456_RS12380 PF00970 Oxidoreductase FAD-binding domain DA456_RS12380 PF00175 Oxidoreductase NAD-binding domain DA456_RS12385 PF02954 Bacterial regulatory protein, Fis family DA456_RS12385 PF00158 Sigma-54 interaction domain DA456_RS12405 PF00958 GMP synthase C terminal domain DA456_RS12405 PF02540 NAD synthase DA456_RS12405 PF00117 Glutamine amidotransferase class-I DA456_RS12410 PF00478 IMP dehydrogenase / GMP reductase domain DA456_RS12410 PF00571 CBS domain DA456_RS12420 PF13742 OB-fold nucleic acid binding domain DA456_RS12420 PF02601 Exonuclease VII, large subunit DA456_RS12425 PF01476 LysM domain DA456_RS12425 PF01551 Peptidase family M23 DA456_RS12425 PF08525 Opacity-associated protein A N-terminal motif DA456_RS12430 PF08502 LeuA allosteric (dimerisation) domain DA456_RS12430 PF00682 HMGL-like DA456_RS12445 PF00795 Carbon-nitrogen hydrolase DA456_RS12450 PF00155 Aminotransferase class I and II DA456_RS12455 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DA456_RS12455 PF01926 50S ribosome-binding GTPase DA456_RS12460 PF13360 PQQ-like domain DA456_RS12470 PF03129 Anticodon binding domain DA456_RS12470 PF13393 Histidyl-tRNA synthetase DA456_RS12475 PF04551 GcpE protein DA456_RS12490 PF04055 Radical SAM superfamily DA456_RS12495 PF00334 Nucleoside diphosphate kinase DA456_RS12500 PF04384 Iron-sulphur cluster assembly DA456_RS12505 PF00111 2Fe-2S iron-sulfur cluster binding domain DA456_RS12510 PF00012 Hsp70 protein DA456_RS12515 PF07743 HSCB C-terminal oligomerisation domain DA456_RS12515 PF00226 DnaJ domain DA456_RS12520 PF01521 Iron-sulphur cluster biosynthesis DA456_RS12525 PF01592 NifU-like N terminal domain DA456_RS12530 PF00266 Aminotransferase class-V DA456_RS12535 PF02082 Transcriptional regulator DA456_RS12545 PF00132 Bacterial transferase hexapeptide (six repeats) DA456_RS12550 PF00588 SpoU rRNA Methylase family DA456_RS12555 PF00459 Inositol monophosphatase family DA456_RS12560 PF05433 Glycine zipper 2TM domain DA456_RS12565 PF02355 Protein export membrane protein DA456_RS12565 PF07549 SecD/SecF GG Motif DA456_RS12570 PF07549 SecD/SecF GG Motif DA456_RS12570 PF13721 SecD export protein N-terminal TM region DA456_RS12570 PF02355 Protein export membrane protein DA456_RS12575 PF02699 Preprotein translocase subunit DA456_RS12580 PF01702 Queuine tRNA-ribosyltransferase DA456_RS12585 PF02547 Queuosine biosynthesis protein DA456_RS12605 PF16937 Type III secretion system translocator protein, HrpF DA456_RS12610 PF04542 Sigma-70 region 2 DA456_RS12610 PF08281 Sigma-70, region 4 DA456_RS12615 PF07201 HrpJ-like domain DA456_RS12620 PF00771 FHIPEP family DA456_RS12630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA456_RS12630 PF02874 ATP synthase alpha/beta family, beta-barrel domain DA456_RS12630 PF18269 T3SS EscN ATPase C-terminal domain DA456_RS12650 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DA456_RS12655 PF00813 FliP family DA456_RS12660 PF01313 Bacterial export proteins, family 3 DA456_RS12670 PF01312 FlhB HrpN YscU SpaS Family DA456_RS12690 PF03958 Bacterial type II/III secretion system short domain DA456_RS12690 PF00263 Bacterial type II and III secretion system protein DA456_RS12715 PF01514 Secretory protein of YscJ/FliF family DA456_RS12725 PF04877 HrpZ DA456_RS12730 PF09589 HrpA pilus formation protein DA456_RS12735 PF02954 Bacterial regulatory protein, Fis family DA456_RS12735 PF00158 Sigma-54 interaction domain DA456_RS12740 PF02954 Bacterial regulatory protein, Fis family DA456_RS12740 PF00158 Sigma-54 interaction domain DA456_RS12745 PF01476 LysM domain DA456_RS12745 PF01464 Transglycosylase SLT domain DA456_RS12780 PF01062 Bestrophin, RFP-TM, chloride channel DA456_RS12785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS12785 PF03466 LysR substrate binding domain DA456_RS12795 PF07690 Major Facilitator Superfamily DA456_RS12800 PF00456 Transketolase, thiamine diphosphate binding domain DA456_RS12805 PF02780 Transketolase, C-terminal domain DA456_RS12805 PF02779 Transketolase, pyrimidine binding domain DA456_RS12810 PF07859 alpha/beta hydrolase fold DA456_RS12845 PF00083 Sugar (and other) transporter DA456_RS12855 PF01425 Amidase DA456_RS12860 PF02608 ABC transporter substrate-binding protein PnrA-like DA456_RS12870 PF02653 Branched-chain amino acid transport system / permease component DA456_RS12875 PF00795 Carbon-nitrogen hydrolase DA456_RS12880 PF00857 Isochorismatase family DA456_RS12885 PF00005 ABC transporter DA456_RS12890 PF00857 Isochorismatase family DA456_RS12900 PF00392 Bacterial regulatory proteins, gntR family DA456_RS12900 PF07729 FCD domain DA456_RS12910 PF03707 Bacterial signalling protein N terminal repeat DA456_RS12910 PF00563 EAL domain DA456_RS12910 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS12915 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS12930 PF00080 Copper/zinc superoxide dismutase (SODC) DA456_RS12935 PF00109 Beta-ketoacyl synthase, N-terminal domain DA456_RS12935 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS12935 PF14765 Polyketide synthase dehydratase DA456_RS12935 PF00698 Acyl transferase domain DA456_RS12935 PF16197 Ketoacyl-synthetase C-terminal extension DA456_RS12935 PF00550 Phosphopantetheine attachment site DA456_RS12935 PF02801 Beta-ketoacyl synthase, C-terminal domain DA456_RS12935 PF00107 Zinc-binding dehydrogenase DA456_RS12935 PF08659 KR domain DA456_RS12945 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS12955 PF01063 Amino-transferase class IV DA456_RS12960 PF00132 Bacterial transferase hexapeptide (six repeats) DA456_RS12965 PF00535 Glycosyl transferase family 2 DA456_RS12970 PF01040 UbiA prenyltransferase family DA456_RS12975 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DA456_RS12980 PF00510 Cytochrome c oxidase subunit III DA456_RS12985 PF00115 Cytochrome C and Quinol oxidase polypeptide I DA456_RS12990 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DA456_RS12990 PF06481 COX Aromatic Rich Motif DA456_RS13000 PF02600 Disulfide bond formation protein DsbB DA456_RS13005 PF00072 Response regulator receiver domain DA456_RS13005 PF01584 CheW-like domain DA456_RS13030 PF02753 Pili assembly chaperone PapD, C-terminal domain DA456_RS13030 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DA456_RS13035 PF00577 Outer membrane usher protein DA456_RS13035 PF13954 PapC N-terminal domain DA456_RS13035 PF13953 PapC C-terminal domain DA456_RS13040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DA456_RS13040 PF02753 Pili assembly chaperone PapD, C-terminal domain DA456_RS13055 PF13533 Biotin-lipoyl like DA456_RS13060 PF00873 AcrB/AcrD/AcrF family DA456_RS13065 PF00072 Response regulator receiver domain DA456_RS13065 PF00486 Transcriptional regulatory protein, C terminal DA456_RS13070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS13070 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS13070 PF00672 HAMP domain DA456_RS13075 PF00360 Phytochrome region DA456_RS13075 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS13075 PF00563 EAL domain DA456_RS13075 PF01590 GAF domain DA456_RS13085 PF12843 Putative quorum-sensing-regulated virulence factor DA456_RS13090 PF01081 KDPG and KHG aldolase DA456_RS13095 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DA456_RS13100 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DA456_RS13100 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DA456_RS13105 PF01380 SIS domain DA456_RS13105 PF01418 Helix-turn-helix domain, rpiR family DA456_RS13110 PF01263 Aldose 1-epimerase DA456_RS13120 PF04966 Carbohydrate-selective porin, OprB family DA456_RS13125 PF00005 ABC transporter DA456_RS13125 PF08402 TOBE domain DA456_RS13130 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS13135 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS13140 PF01547 Bacterial extracellular solute-binding protein DA456_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS13145 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS13145 PF00672 HAMP domain DA456_RS13150 PF00486 Transcriptional regulatory protein, C terminal DA456_RS13150 PF00072 Response regulator receiver domain DA456_RS13155 PF02685 Glucokinase DA456_RS13160 PF00920 Dehydratase family DA456_RS13165 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DA456_RS13165 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DA456_RS13170 PF04304 Protein of unknown function (DUF454) DA456_RS13185 PF00158 Sigma-54 interaction domain DA456_RS13185 PF18024 Helix-turn-helix domain DA456_RS13190 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS13190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS13195 PF00072 Response regulator receiver domain DA456_RS13200 PF00563 EAL domain DA456_RS13200 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS13200 PF03707 Bacterial signalling protein N terminal repeat DA456_RS13210 PF01597 Glycine cleavage H-protein DA456_RS13215 PF02347 Glycine cleavage system P-protein DA456_RS13220 PF01571 Aminomethyltransferase folate-binding domain DA456_RS13220 PF08669 Glycine cleavage T-protein C-terminal barrel domain DA456_RS13225 PF00313 'Cold-shock' DNA-binding domain DA456_RS13230 PF03739 Lipopolysaccharide export system permease LptF/LptG DA456_RS13235 PF03739 Lipopolysaccharide export system permease LptF/LptG DA456_RS13240 PF02789 Cytosol aminopeptidase family, N-terminal domain DA456_RS13240 PF00883 Cytosol aminopeptidase family, catalytic domain DA456_RS13245 PF04364 DNA polymerase III chi subunit, HolC DA456_RS13260 PF10458 Valyl tRNA synthetase tRNA binding arm DA456_RS13260 PF00133 tRNA synthetases class I (I, L, M and V) DA456_RS13260 PF08264 Anticodon-binding domain of tRNA DA456_RS13265 PF05971 RNA methyltransferase DA456_RS13275 PF00216 Bacterial DNA-binding protein DA456_RS13280 PF04245 37-kD nucleoid-associated bacterial protein DA456_RS13295 PF01541 GIY-YIG catalytic domain DA456_RS13305 PF01638 HxlR-like helix-turn-helix DA456_RS13315 PF07690 Major Facilitator Superfamily DA456_RS13325 PF00005 ABC transporter DA456_RS13330 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS13335 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS13340 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS13345 PF02230 Phospholipase/Carboxylesterase DA456_RS13350 PF00271 Helicase conserved C-terminal domain DA456_RS13350 PF00270 DEAD/DEAH box helicase DA456_RS13355 PF02391 MoaE protein DA456_RS13360 PF02597 ThiS family DA456_RS13365 PF01967 MoaC family DA456_RS13370 PF02562 PhoH-like protein DA456_RS13370 PF13638 PIN domain DA456_RS13380 PF03883 Peroxide stress protein YaaA DA456_RS13385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DA456_RS13385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DA456_RS13385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DA456_RS13395 PF07238 PilZ domain DA456_RS13400 PF08238 Sel1 repeat DA456_RS13405 PF13372 Alginate export DA456_RS13410 PF13229 Right handed beta helix region DA456_RS13415 PF16824 C-terminal carbohydrate-binding module DA456_RS13415 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX DA456_RS13420 PF05426 Alginate lyase DA456_RS13425 PF03062 MBOAT, membrane-bound O-acyltransferase family DA456_RS13430 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX DA456_RS13435 PF11182 Alginate O-acetyl transferase AlgF DA456_RS13440 PF01050 Mannose-6-phosphate isomerase DA456_RS13440 PF00483 Nucleotidyl transferase DA456_RS13445 PF05785 Rho-activating domain of cytotoxic necrotizing factor DA456_RS13445 PF18807 Tripartite Tc toxins repeat DA456_RS13455 PF00106 short chain dehydrogenase DA456_RS13460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS13460 PF00529 HlyD membrane-fusion protein of T1SS DA456_RS13470 PF04632 Fusaric acid resistance protein family DA456_RS13475 PF02321 Outer membrane efflux protein DA456_RS13480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS13480 PF03466 LysR substrate binding domain DA456_RS13485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA456_RS13485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA456_RS13490 PF00892 EamA-like transporter family DA456_RS13495 PF12833 Helix-turn-helix domain DA456_RS13520 PF16220 Domain of unknown function (DUF4880) DA456_RS13520 PF04773 FecR protein DA456_RS13535 PF07660 Secretin and TonB N terminus short domain DA456_RS13535 PF07715 TonB-dependent Receptor Plug Domain DA456_RS13535 PF00593 TonB dependent receptor DA456_RS13560 PF06146 Phosphate-starvation-inducible E DA456_RS13575 PF02350 UDP-N-acetylglucosamine 2-epimerase DA456_RS13585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DA456_RS13585 PF13632 Glycosyl transferase family group 2 DA456_RS13600 PF13369 Transglutaminase-like superfamily DA456_RS13610 PF00106 short chain dehydrogenase DA456_RS13615 PF00258 Flavodoxin DA456_RS13635 PF01227 GTP cyclohydrolase I DA456_RS13640 PF02152 Dihydroneopterin aldolase DA456_RS13655 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS13685 PF13439 Glycosyltransferase Family 4 DA456_RS13685 PF00534 Glycosyl transferases group 1 DA456_RS13690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA456_RS13690 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS13695 PF00255 Glutathione peroxidase DA456_RS13700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DA456_RS13710 PF07085 DRTGG domain DA456_RS13710 PF01515 Phosphate acetyl/butaryl transferase DA456_RS13715 PF01553 Acyltransferase DA456_RS13720 PF00691 OmpA family DA456_RS13720 PF13488 Glycine zipper DA456_RS13725 PF02653 Branched-chain amino acid transport system / permease component DA456_RS13735 PF00005 ABC transporter DA456_RS13745 PF08362 YcdC-like protein, C-terminal region DA456_RS13745 PF00440 Bacterial regulatory proteins, tetR family DA456_RS13750 PF00296 Luciferase-like monooxygenase DA456_RS13755 PF00857 Isochorismatase family DA456_RS13760 PF01042 Endoribonuclease L-PSP DA456_RS13765 PF12697 Alpha/beta hydrolase family DA456_RS13770 PF01613 Flavin reductase like domain DA456_RS13775 PF01966 HD domain DA456_RS13775 PF11871 Domain of unknown function (DUF3391) DA456_RS13780 PF13191 AAA ATPase domain DA456_RS13780 PF00069 Protein kinase domain DA456_RS13785 PF07044 Protein of unknown function (DUF1329) DA456_RS13795 PF00501 AMP-binding enzyme DA456_RS13795 PF13193 AMP-binding enzyme C-terminal domain DA456_RS13800 PF01810 LysE type translocator DA456_RS13805 PF08468 Methyltransferase small domain N-terminal DA456_RS13805 PF05175 Methyltransferase small domain DA456_RS13810 PF01169 Uncharacterized protein family UPF0016 DA456_RS13815 PF01435 Peptidase family M48 DA456_RS13820 PF02586 SOS response associated peptidase (SRAP) DA456_RS13860 PF06039 Malate:quinone oxidoreductase (Mqo) DA456_RS13870 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS13875 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS13895 PF00156 Phosphoribosyl transferase domain DA456_RS13905 PF00860 Permease family DA456_RS13910 PF00762 Ferrochelatase DA456_RS13915 PF08338 Domain of unknown function (DUF1731) DA456_RS13915 PF01370 NAD dependent epimerase/dehydratase family DA456_RS13920 PF01593 Flavin containing amine oxidoreductase DA456_RS13935 PF13411 MerR HTH family regulatory protein DA456_RS13940 PF00875 DNA photolyase DA456_RS13940 PF03441 FAD binding domain of DNA photolyase DA456_RS13950 PF00106 short chain dehydrogenase DA456_RS13955 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS13955 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DA456_RS13980 PF09411 Lipid A 3-O-deacylase (PagL) DA456_RS13985 PF01177 Asp/Glu/Hydantoin racemase DA456_RS13990 PF00899 ThiF family DA456_RS13995 PF05175 Methyltransferase small domain DA456_RS13995 PF17827 PrmC N-terminal domain DA456_RS14000 PF03462 PCRF domain DA456_RS14000 PF00472 RF-1 domain DA456_RS14005 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DA456_RS14005 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DA456_RS14005 PF01488 Shikimate / quinate 5-dehydrogenase DA456_RS14015 PF03550 Outer membrane lipoprotein LolB DA456_RS14020 PF08544 GHMP kinases C terminal DA456_RS14020 PF00288 GHMP kinases N terminal domain DA456_RS14030 PF14572 Phosphoribosyl synthetase-associated domain DA456_RS14030 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DA456_RS14035 PF14693 Ribosomal protein TL5, C-terminal domain DA456_RS14035 PF01386 Ribosomal L25p family DA456_RS14040 PF01195 Peptidyl-tRNA hydrolase DA456_RS14045 PF01926 50S ribosome-binding GTPase DA456_RS14045 PF06071 Protein of unknown function (DUF933) DA456_RS14050 PF02463 RecF/RecN/SMC N terminal domain DA456_RS14060 PF00483 Nucleotidyl transferase DA456_RS14060 PF01050 Mannose-6-phosphate isomerase DA456_RS14065 PF00534 Glycosyl transferases group 1 DA456_RS14065 PF13439 Glycosyltransferase Family 4 DA456_RS14070 PF02321 Outer membrane efflux protein DA456_RS14075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS14075 PF00529 HlyD membrane-fusion protein of T1SS DA456_RS14080 PF00664 ABC transporter transmembrane region DA456_RS14080 PF00005 ABC transporter DA456_RS14100 PF00535 Glycosyl transferase family 2 DA456_RS14105 PF00535 Glycosyl transferase family 2 DA456_RS14105 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DA456_RS14110 PF17843 MycE methyltransferase N-terminal DA456_RS14115 PF16363 GDP-mannose 4,6 dehydratase DA456_RS14120 PF04321 RmlD substrate binding domain DA456_RS14125 PF00483 Nucleotidyl transferase DA456_RS14135 PF00884 Sulfatase DA456_RS14140 PF00892 EamA-like transporter family DA456_RS14150 PF00534 Glycosyl transferases group 1 DA456_RS14150 PF13477 Glycosyl transferase 4-like DA456_RS14160 PF14524 Wzt C-terminal domain DA456_RS14160 PF00005 ABC transporter DA456_RS14165 PF01061 ABC-2 type transporter DA456_RS14170 PF16363 GDP-mannose 4,6 dehydratase DA456_RS14175 PF16363 GDP-mannose 4,6 dehydratase DA456_RS14205 PF03466 LysR substrate binding domain DA456_RS14205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS14210 PF01070 FMN-dependent dehydrogenase DA456_RS14220 PF02743 Cache domain DA456_RS14220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS14220 PF00672 HAMP domain DA456_RS14225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS14225 PF00672 HAMP domain DA456_RS14225 PF16591 Helical bimodular sensor domain DA456_RS14240 PF03573 outer membrane porin, OprD family DA456_RS14245 PF01370 NAD dependent epimerase/dehydratase family DA456_RS14250 PF08450 SMP-30/Gluconolactonase/LRE-like region DA456_RS14255 PF03480 Bacterial extracellular solute-binding protein, family 7 DA456_RS14265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DA456_RS14280 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DA456_RS14285 PF01850 PIN domain DA456_RS14290 PF04542 Sigma-70 region 2 DA456_RS14290 PF04545 Sigma-70, region 4 DA456_RS14300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DA456_RS14310 PF00072 Response regulator receiver domain DA456_RS14310 PF00158 Sigma-54 interaction domain DA456_RS14310 PF02954 Bacterial regulatory protein, Fis family DA456_RS14315 PF09722 Protein of unknown function (DUF2384) DA456_RS14320 PF08808 RES domain DA456_RS14345 PF00583 Acetyltransferase (GNAT) family DA456_RS14355 PF01618 MotA/TolQ/ExbB proton channel family DA456_RS14370 PF02472 Biopolymer transport protein ExbD/TolR DA456_RS14380 PF16655 PhoD-like phosphatase, N-terminal domain DA456_RS14380 PF09423 PhoD-like phosphatase DA456_RS14385 PF08447 PAS fold DA456_RS14385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS14385 PF13426 PAS domain DA456_RS14390 PF01590 GAF domain DA456_RS14390 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS14390 PF00360 Phytochrome region DA456_RS14390 PF00563 EAL domain DA456_RS14400 PF00672 HAMP domain DA456_RS14400 PF12729 Four helix bundle sensory module for signal transduction DA456_RS14400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS14410 PF01066 CDP-alcohol phosphatidyltransferase DA456_RS14415 PF07690 Major Facilitator Superfamily DA456_RS14420 PF04134 Protein of unknown function, DUF393 DA456_RS14425 PF03831 PhnA domain DA456_RS14425 PF08274 PhnA Zinc-Ribbon DA456_RS14430 PF01757 Acyltransferase family DA456_RS14435 PF01966 HD domain DA456_RS14440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS14440 PF12729 Four helix bundle sensory module for signal transduction DA456_RS14440 PF00672 HAMP domain DA456_RS14445 PF00484 Carbonic anhydrase DA456_RS14455 PF00583 Acetyltransferase (GNAT) family DA456_RS14480 PF13229 Right handed beta helix region DA456_RS14515 PF01794 Ferric reductase like transmembrane component DA456_RS14520 PF00174 Oxidoreductase molybdopterin binding domain DA456_RS14525 PF01066 CDP-alcohol phosphatidyltransferase DA456_RS14530 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DA456_RS14530 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DA456_RS14535 PF10369 Small subunit of acetolactate synthase DA456_RS14540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA456_RS14540 PF00205 Thiamine pyrophosphate enzyme, central domain DA456_RS14540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DA456_RS14560 PF14814 Bifunctional transglycosylase second domain DA456_RS14560 PF00912 Transglycosylase DA456_RS14560 PF00905 Penicillin binding protein transpeptidase domain DA456_RS14575 PF01791 DeoC/LacD family aldolase DA456_RS14585 PF17746 SfsA N-terminal OB domain DA456_RS14585 PF03749 Sugar fermentation stimulation protein RE domain DA456_RS14590 PF00155 Aminotransferase class I and II DA456_RS14595 PF01258 Prokaryotic dksA/traR C4-type zinc finger DA456_RS14605 PF00749 tRNA synthetases class I (E and Q), catalytic domain DA456_RS14615 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS14615 PF00989 PAS fold DA456_RS14615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS14615 PF08447 PAS fold DA456_RS14620 PF00158 Sigma-54 interaction domain DA456_RS14620 PF00072 Response regulator receiver domain DA456_RS14620 PF02954 Bacterial regulatory protein, Fis family DA456_RS14625 PF12627 Probable RNA and SrmB- binding site of polymerase A DA456_RS14625 PF12626 Polymerase A arginine-rich C-terminus DA456_RS14625 PF01743 Poly A polymerase head domain DA456_RS14630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DA456_RS14635 PF02548 Ketopantoate hydroxymethyltransferase DA456_RS14640 PF02569 Pantoate-beta-alanine ligase DA456_RS14645 PF00342 Phosphoglucose isomerase DA456_RS14655 PF02803 Thiolase, C-terminal domain DA456_RS14655 PF00108 Thiolase, N-terminal domain DA456_RS14660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DA456_RS14660 PF02378 Phosphotransferase system, EIIC DA456_RS14665 PF00294 pfkB family carbohydrate kinase DA456_RS14670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DA456_RS14670 PF00381 PTS HPr component phosphorylation site DA456_RS14670 PF02896 PEP-utilising enzyme, TIM barrel domain DA456_RS14670 PF05524 PEP-utilising enzyme, N-terminal DA456_RS14670 PF00391 PEP-utilising enzyme, mobile domain DA456_RS14675 PF00356 Bacterial regulatory proteins, lacI family DA456_RS14675 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DA456_RS14680 PF01026 TatD related DNase DA456_RS14690 PF01510 N-acetylmuramoyl-L-alanine amidase DA456_RS14700 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DA456_RS14700 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DA456_RS14715 PF02342 TerD domain DA456_RS14720 PF02342 TerD domain DA456_RS14725 PF03741 Integral membrane protein TerC family DA456_RS14735 PF02342 TerD domain DA456_RS14740 PF02342 TerD domain DA456_RS14755 PF11202 Phosphoribosyl transferase (PRTase) DA456_RS14755 PF15608 PELOTA RNA binding domain DA456_RS14770 PF02342 TerD domain DA456_RS14780 PF07509 Protein of unknown function (DUF1523) DA456_RS14785 PF07963 Prokaryotic N-terminal methylation motif DA456_RS14785 PF00114 Pilin (bacterial filament) DA456_RS14790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DA456_RS14790 PF00437 Type II/IV secretion system protein DA456_RS14795 PF00482 Type II secretion system (T2SS), protein F DA456_RS14800 PF01478 Type IV leader peptidase family DA456_RS14800 PF06750 Bacterial Peptidase A24 N-terminal domain DA456_RS14805 PF01121 Dephospho-CoA kinase DA456_RS14810 PF03884 DNA gyrase inhibitor YacG DA456_RS14835 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS14840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS14840 PF00672 HAMP domain DA456_RS14845 PF00072 Response regulator receiver domain DA456_RS14855 PF01627 Hpt domain DA456_RS14855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS14855 PF02895 Signal transducing histidine kinase, homodimeric domain DA456_RS14855 PF01584 CheW-like domain DA456_RS14855 PF07194 P2 response regulator binding domain DA456_RS14860 PF00672 HAMP domain DA456_RS14860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS14860 PF02203 Tar ligand binding domain homologue DA456_RS14865 PF01584 CheW-like domain DA456_RS14870 PF03705 CheR methyltransferase, all-alpha domain DA456_RS14870 PF01739 CheR methyltransferase, SAM binding domain DA456_RS14875 PF03975 CheD chemotactic sensory transduction DA456_RS14880 PF00072 Response regulator receiver domain DA456_RS14880 PF01339 CheB methylesterase DA456_RS14885 PF03536 Salmonella virulence-associated 28kDa protein DA456_RS14905 PF00356 Bacterial regulatory proteins, lacI family DA456_RS14910 PF13407 Periplasmic binding protein domain DA456_RS14915 PF00005 ABC transporter DA456_RS14920 PF02653 Branched-chain amino acid transport system / permease component DA456_RS14925 PF02126 Phosphotriesterase family DA456_RS14935 PF01546 Peptidase family M20/M25/M40 DA456_RS14935 PF07687 Peptidase dimerisation domain DA456_RS14945 PF04239 Protein of unknown function (DUF421) DA456_RS14950 PF13419 Haloacid dehalogenase-like hydrolase DA456_RS14960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS14960 PF03466 LysR substrate binding domain DA456_RS14965 PF07274 Protein of unknown function (DUF1440) DA456_RS14980 PF11471 Maltoporin periplasmic N-terminal extension DA456_RS14980 PF02264 LamB porin DA456_RS14985 PF01547 Bacterial extracellular solute-binding protein DA456_RS14990 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS14995 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS15000 PF17912 MalK OB fold domain DA456_RS15000 PF00005 ABC transporter DA456_RS15005 PF00251 Glycosyl hydrolases family 32 N-terminal domain DA456_RS15005 PF08244 Glycosyl hydrolases family 32 C terminal DA456_RS15010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DA456_RS15010 PF00356 Bacterial regulatory proteins, lacI family DA456_RS15015 PF12729 Four helix bundle sensory module for signal transduction DA456_RS15015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS15015 PF00672 HAMP domain DA456_RS15020 PF00218 Indole-3-glycerol phosphate synthase DA456_RS15030 PF00501 AMP-binding enzyme DA456_RS15030 PF00668 Condensation domain DA456_RS15030 PF00550 Phosphopantetheine attachment site DA456_RS15030 PF13193 AMP-binding enzyme C-terminal domain DA456_RS15045 PF02435 Levansucrase/Invertase DA456_RS15055 PF02638 Glycosyl hydrolase-like 10 DA456_RS15075 PF03466 LysR substrate binding domain DA456_RS15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS15095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DA456_RS15110 PF03796 DnaB-like helicase C terminal domain DA456_RS15110 PF00772 DnaB-like helicase N terminal domain DA456_RS15130 PF03869 Arc-like DNA binding domain DA456_RS15190 PF00176 SNF2 family N-terminal domain DA456_RS15190 PF00271 Helicase conserved C-terminal domain DA456_RS15220 PF00437 Type II/IV secretion system protein DA456_RS15220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DA456_RS15235 PF00437 Type II/IV secretion system protein DA456_RS15240 PF04917 Bacterial shufflon protein, N-terminal constant region DA456_RS15255 PF02899 Phage integrase, N-terminal SAM-like domain DA456_RS15255 PF00589 Phage integrase family DA456_RS15275 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS15275 PF00672 HAMP domain DA456_RS15275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS15280 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DA456_RS15290 PF00654 Voltage gated chloride channel DA456_RS15315 PF03952 Enolase, N-terminal domain DA456_RS15315 PF00113 Enolase, C-terminal TIM barrel domain DA456_RS15320 PF00719 Inorganic pyrophosphatase DA456_RS15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS15335 PF03466 LysR substrate binding domain DA456_RS15355 PF02899 Phage integrase, N-terminal SAM-like domain DA456_RS15355 PF00589 Phage integrase family DA456_RS15360 PF01022 Bacterial regulatory protein, arsR family DA456_RS15365 PF02040 Arsenical pump membrane protein DA456_RS15370 PF01451 Low molecular weight phosphotyrosine protein phosphatase DA456_RS15375 PF03358 NADPH-dependent FMN reductase DA456_RS15385 PF09278 MerR, DNA binding DA456_RS15385 PF00376 MerR family regulatory protein DA456_RS15390 PF13276 HTH-like domain DA456_RS15390 PF01527 Transposase DA456_RS15390 PF00665 Integrase core domain DA456_RS15395 PF05717 IS66 Orf2 like protein DA456_RS15400 PF13817 IS66 C-terminal element DA456_RS15400 PF13007 Transposase C of IS166 homeodomain DA456_RS15400 PF13005 zinc-finger binding domain of transposase IS66 DA456_RS15400 PF03050 Transposase IS66 family DA456_RS15405 PF07929 Plasmid pRiA4b ORF-3-like protein DA456_RS15410 PF12324 Helix-turn-helix domain of alkylmercury lyase DA456_RS15410 PF03243 Alkylmercury lyase DA456_RS15415 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS15415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA456_RS15415 PF00403 Heavy-metal-associated domain DA456_RS15420 PF03203 MerC mercury resistance protein DA456_RS15425 PF00403 Heavy-metal-associated domain DA456_RS15430 PF02411 MerT mercuric transport protein DA456_RS15435 PF00376 MerR family regulatory protein DA456_RS15435 PF09278 MerR, DNA binding DA456_RS15445 PF01131 DNA topoisomerase DA456_RS15445 PF01751 Toprim domain DA456_RS15615 PF00486 Transcriptional regulatory protein, C terminal DA456_RS15615 PF00072 Response regulator receiver domain DA456_RS15685 PF00817 impB/mucB/samB family DA456_RS15685 PF11799 impB/mucB/samB family C-terminal domain DA456_RS15685 PF13438 Domain of unknown function (DUF4113) DA456_RS15690 PF13438 Domain of unknown function (DUF4113) DA456_RS15690 PF00817 impB/mucB/samB family DA456_RS15690 PF11799 impB/mucB/samB family C-terminal domain DA456_RS15690 PF11798 IMS family HHH motif DA456_RS15715 PF00589 Phage integrase family DA456_RS15715 PF02899 Phage integrase, N-terminal SAM-like domain DA456_RS15745 PF00004 ATPase family associated with various cellular activities (AAA) DA456_RS15745 PF17871 AAA lid domain DA456_RS15745 PF10431 C-terminal, D2-small domain, of ClpB protein DA456_RS15745 PF02861 Clp amino terminal domain, pathogenicity island component DA456_RS15745 PF07724 AAA domain (Cdc48 subfamily) DA456_RS15750 PF02578 Multi-copper polyphenol oxidoreductase laccase DA456_RS15755 PF00849 RNA pseudouridylate synthase DA456_RS15755 PF01479 S4 domain DA456_RS15760 PF13525 Outer membrane lipoprotein DA456_RS15770 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS15770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS15775 PF02954 Bacterial regulatory protein, Fis family DA456_RS15775 PF00072 Response regulator receiver domain DA456_RS15775 PF00158 Sigma-54 interaction domain DA456_RS15780 PF01266 FAD dependent oxidoreductase DA456_RS15790 PF05567 Neisseria PilC beta-propeller domain DA456_RS15810 PF00114 Pilin (bacterial filament) DA456_RS15810 PF07963 Prokaryotic N-terminal methylation motif DA456_RS15815 PF00114 Pilin (bacterial filament) DA456_RS15815 PF07963 Prokaryotic N-terminal methylation motif DA456_RS15820 PF02401 LytB protein DA456_RS15825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DA456_RS15830 PF01252 Signal peptidase (SPase) II DA456_RS15835 PF06827 Zinc finger found in FPG and IleRS DA456_RS15835 PF00133 tRNA synthetases class I (I, L, M and V) DA456_RS15835 PF08264 Anticodon-binding domain of tRNA DA456_RS15840 PF01687 Riboflavin kinase DA456_RS15840 PF06574 FAD synthetase DA456_RS15845 PF03023 Lipid II flippase MurJ DA456_RS15855 PF01649 Ribosomal protein S20 DA456_RS15865 PF05981 CreA protein DA456_RS15870 PF00696 Amino acid kinase family DA456_RS15870 PF01472 PUA domain DA456_RS15875 PF01926 50S ribosome-binding GTPase DA456_RS15875 PF01018 GTP1/OBG DA456_RS15880 PF01016 Ribosomal L27 protein DA456_RS15885 PF00829 Ribosomal prokaryotic L21 protein DA456_RS15890 PF00348 Polyprenyl synthetase DA456_RS15905 PF00586 AIR synthase related protein, N-terminal domain DA456_RS15905 PF02769 AIR synthase related protein, C-terminal domain DA456_RS15915 PF00005 ABC transporter DA456_RS15920 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS15925 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS15935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DA456_RS15935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DA456_RS15940 PF00171 Aldehyde dehydrogenase family DA456_RS15945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS15945 PF03466 LysR substrate binding domain DA456_RS15975 PF13538 UvrD-like helicase C-terminal domain DA456_RS15980 PF12705 PD-(D/E)XK nuclease superfamily DA456_RS15980 PF13361 UvrD-like helicase C-terminal domain DA456_RS15980 PF00580 UvrD/REP helicase N-terminal domain DA456_RS15985 PF17946 RecC C-terminal domain DA456_RS16020 PF00171 Aldehyde dehydrogenase family DA456_RS16025 PF00202 Aminotransferase class-III DA456_RS16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS16030 PF03466 LysR substrate binding domain DA456_RS16035 PF00860 Permease family DA456_RS16040 PF00440 Bacterial regulatory proteins, tetR family DA456_RS16040 PF08362 YcdC-like protein, C-terminal region DA456_RS16045 PF01205 Uncharacterized protein family UPF0029 DA456_RS16050 PF00005 ABC transporter DA456_RS16055 PF02653 Branched-chain amino acid transport system / permease component DA456_RS16060 PF02653 Branched-chain amino acid transport system / permease component DA456_RS16075 PF01979 Amidohydrolase family DA456_RS16080 PF01699 Sodium/calcium exchanger protein DA456_RS16085 PF01497 Periplasmic binding protein DA456_RS16090 PF01032 FecCD transport family DA456_RS16095 PF01032 FecCD transport family DA456_RS16100 PF00005 ABC transporter DA456_RS16105 PF02608 ABC transporter substrate-binding protein PnrA-like DA456_RS16110 PF14226 non-haem dioxygenase in morphine synthesis N-terminal DA456_RS16110 PF03171 2OG-Fe(II) oxygenase superfamily DA456_RS16115 PF00962 Adenosine/AMP deaminase DA456_RS16125 PF03466 LysR substrate binding domain DA456_RS16125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS16130 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS16130 PF00107 Zinc-binding dehydrogenase DA456_RS16135 PF07690 Major Facilitator Superfamily DA456_RS16150 PF00403 Heavy-metal-associated domain DA456_RS16155 PF09278 MerR, DNA binding DA456_RS16155 PF00376 MerR family regulatory protein DA456_RS16180 PF02311 AraC-like ligand binding domain DA456_RS16180 PF12833 Helix-turn-helix domain DA456_RS16185 PF13593 SBF-like CPA transporter family (DUF4137) DA456_RS16205 PF00108 Thiolase, N-terminal domain DA456_RS16205 PF02803 Thiolase, C-terminal domain DA456_RS16225 PF13847 Methyltransferase domain DA456_RS16245 PF04172 LrgB-like family DA456_RS16250 PF03788 LrgA family DA456_RS16255 PF01575 MaoC like domain DA456_RS16265 PF13460 NAD(P)H-binding DA456_RS16275 PF02441 Flavoprotein DA456_RS16280 PF01225 Mur ligase family, catalytic domain DA456_RS16280 PF02875 Mur ligase family, glutamate ligase domain DA456_RS16280 PF08245 Mur ligase middle domain DA456_RS16290 PF00171 Aldehyde dehydrogenase family DA456_RS16295 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DA456_RS16300 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DA456_RS16305 PF09335 SNARE associated Golgi protein DA456_RS16310 PF06167 Glucose-regulated metallo-peptidase M90 DA456_RS16315 PF00719 Inorganic pyrophosphatase DA456_RS16320 PF01381 Helix-turn-helix DA456_RS16320 PF00717 Peptidase S24-like DA456_RS16355 PF13419 Haloacid dehalogenase-like hydrolase DA456_RS16370 PF00005 ABC transporter DA456_RS16375 PF01061 ABC-2 type transporter DA456_RS16380 PF02798 Glutathione S-transferase, N-terminal domain DA456_RS16390 PF01053 Cys/Met metabolism PLP-dependent enzyme DA456_RS16395 PF02609 Exonuclease VII small subunit DA456_RS16400 PF00348 Polyprenyl synthetase DA456_RS16405 PF02779 Transketolase, pyrimidine binding domain DA456_RS16405 PF02780 Transketolase, C-terminal domain DA456_RS16405 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DA456_RS16415 PF00106 short chain dehydrogenase DA456_RS16425 PF00005 ABC transporter DA456_RS16430 PF00005 ABC transporter DA456_RS16430 PF12399 Branched-chain amino acid ATP-binding cassette transporter DA456_RS16435 PF11862 Domain of unknown function (DUF3382) DA456_RS16435 PF02653 Branched-chain amino acid transport system / permease component DA456_RS16440 PF02653 Branched-chain amino acid transport system / permease component DA456_RS16445 PF13458 Periplasmic binding protein DA456_RS16450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS16450 PF03466 LysR substrate binding domain DA456_RS16455 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DA456_RS16455 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DA456_RS16460 PF02540 NAD synthase DA456_RS16470 PF00127 Copper binding proteins, plastocyanin/azurin family DA456_RS16480 PF14403 Circularly permuted ATP-grasp type 2 DA456_RS16480 PF04168 A predicted alpha-helical domain with a conserved ER motif. DA456_RS16495 PF11842 Domain of unknown function (DUF3362) DA456_RS16495 PF04055 Radical SAM superfamily DA456_RS16495 PF08497 Radical SAM N-terminal DA456_RS16500 PF00772 DnaB-like helicase N terminal domain DA456_RS16500 PF03796 DnaB-like helicase C terminal domain DA456_RS16505 PF03948 Ribosomal protein L9, C-terminal domain DA456_RS16505 PF01281 Ribosomal protein L9, N-terminal domain DA456_RS16515 PF01084 Ribosomal protein S18 DA456_RS16520 PF01250 Ribosomal protein S6 DA456_RS16525 PF08032 RNA 2'-O ribose methyltransferase substrate binding DA456_RS16525 PF00588 SpoU rRNA Methylase family DA456_RS16530 PF00575 S1 RNA binding domain DA456_RS16530 PF08461 Ribonuclease R winged-helix domain DA456_RS16530 PF17876 Cold shock domain DA456_RS16530 PF08206 Ribonuclease B OB domain DA456_RS16530 PF00773 RNB domain DA456_RS16550 PF00672 HAMP domain DA456_RS16550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS16555 PF00709 Adenylosuccinate synthetase DA456_RS16560 PF13393 Histidyl-tRNA synthetase DA456_RS16565 PF01145 SPFH domain / Band 7 family DA456_RS16570 PF01145 SPFH domain / Band 7 family DA456_RS16575 PF01926 50S ribosome-binding GTPase DA456_RS16575 PF13167 GTP-binding GTPase N-terminal DA456_RS16575 PF16360 GTP-binding GTPase Middle Region DA456_RS16580 PF17209 Hfq protein DA456_RS16590 PF08676 MutL C terminal dimerisation domain DA456_RS16590 PF01119 DNA mismatch repair protein, C-terminal domain DA456_RS16595 PF01520 N-acetylmuramoyl-L-alanine amidase DA456_RS16595 PF11741 AMIN domain DA456_RS16600 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DA456_RS16605 PF03853 YjeF-related protein N-terminus DA456_RS16605 PF01256 Carbohydrate kinase DA456_RS16610 PF08331 Domain of unknown function (DUF1730) DA456_RS16615 PF03458 UPF0126 domain DA456_RS16620 PF00929 Exonuclease DA456_RS16625 PF03193 RsgA GTPase DA456_RS16630 PF00691 OmpA family DA456_RS16630 PF13677 Membrane MotB of proton-channel complex MotA/MotB DA456_RS16635 PF01618 MotA/TolQ/ExbB proton channel family DA456_RS16645 PF02666 Phosphatidylserine decarboxylase DA456_RS16670 PF00521 DNA gyrase/topoisomerase IV, subunit A DA456_RS16670 PF03989 DNA gyrase C-terminal domain, beta-propeller DA456_RS16685 PF00204 DNA gyrase B DA456_RS16685 PF01751 Toprim domain DA456_RS16685 PF00986 DNA gyrase B subunit, carboxyl terminus DA456_RS16685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS16690 PF05728 Uncharacterised protein family (UPF0227) DA456_RS16695 PF00149 Calcineurin-like phosphoesterase DA456_RS16715 PF00293 NUDIX domain DA456_RS16730 PF01964 Radical SAM ThiC family DA456_RS16730 PF13667 ThiC-associated domain DA456_RS16735 PF02321 Outer membrane efflux protein DA456_RS16740 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DA456_RS16745 PF00893 Small Multidrug Resistance protein DA456_RS16750 PF01266 FAD dependent oxidoreductase DA456_RS16755 PF00248 Aldo/keto reductase family DA456_RS16765 PF01467 Cytidylyltransferase-like DA456_RS16765 PF00294 pfkB family carbohydrate kinase DA456_RS16770 PF00005 ABC transporter DA456_RS16770 PF00664 ABC transporter transmembrane region DA456_RS16805 PF13439 Glycosyltransferase Family 4 DA456_RS16810 PF02543 Carbamoyltransferase N-terminus DA456_RS16810 PF16861 Carbamoyltransferase C-terminus DA456_RS16840 PF00534 Glycosyl transferases group 1 DA456_RS16840 PF13439 Glycosyltransferase Family 4 DA456_RS16845 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DA456_RS16850 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DA456_RS16855 PF08335 GlnD PII-uridylyltransferase DA456_RS16855 PF03710 Glutamate-ammonia ligase adenylyltransferase DA456_RS16860 PF17831 Pyruvate dehydrogenase E1 component middle domain DA456_RS16860 PF00456 Transketolase, thiamine diphosphate binding domain DA456_RS16865 PF02817 e3 binding domain DA456_RS16865 PF00364 Biotin-requiring enzyme DA456_RS16865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DA456_RS16870 PF00271 Helicase conserved C-terminal domain DA456_RS16870 PF00270 DEAD/DEAH box helicase DA456_RS16870 PF03880 DbpA RNA binding domain DA456_RS16880 PF12805 FUSC-like inner membrane protein yccS DA456_RS16890 PF13673 Acetyltransferase (GNAT) domain DA456_RS16900 PF01863 Protein of unknown function DUF45 DA456_RS16905 PF03707 Bacterial signalling protein N terminal repeat DA456_RS16905 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS16905 PF00563 EAL domain DA456_RS16915 PF00474 Sodium:solute symporter family DA456_RS16920 PF14850 DNA-binding domain of Proline dehydrogenase DA456_RS16920 PF01619 Proline dehydrogenase DA456_RS16920 PF00171 Aldehyde dehydrogenase family DA456_RS16920 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DA456_RS16935 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS16935 PF12806 Acetyl-CoA dehydrogenase C-terminal like DA456_RS16935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS16935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS16950 PF03471 Transporter associated domain DA456_RS16950 PF00999 Sodium/hydrogen exchanger family DA456_RS16950 PF02080 TrkA-C domain DA456_RS16955 PF00924 Mechanosensitive ion channel DA456_RS16955 PF12795 Mechanosensitive ion channel porin domain DA456_RS16955 PF12794 Mechanosensitive ion channel inner membrane domain 1 DA456_RS16960 PF00364 Biotin-requiring enzyme DA456_RS16960 PF02785 Biotin carboxylase C-terminal domain DA456_RS16960 PF00289 Biotin carboxylase, N-terminal domain DA456_RS16960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA456_RS16965 PF02626 Carboxyltransferase domain, subdomain A and B DA456_RS16975 PF03746 LamB/YcsF family DA456_RS16980 PF01566 Natural resistance-associated macrophage protein DA456_RS16985 PF07729 FCD domain DA456_RS16985 PF00392 Bacterial regulatory proteins, gntR family DA456_RS16990 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DA456_RS17005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS17005 PF01584 CheW-like domain DA456_RS17005 PF07194 P2 response regulator binding domain DA456_RS17005 PF01627 Hpt domain DA456_RS17005 PF02895 Signal transducing histidine kinase, homodimeric domain DA456_RS17010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS17010 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DA456_RS17015 PF01584 CheW-like domain DA456_RS17020 PF00072 Response regulator receiver domain DA456_RS17025 PF00072 Response regulator receiver domain DA456_RS17030 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DA456_RS17030 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DA456_RS17040 PF02622 Uncharacterized ACR, COG1678 DA456_RS17045 PF03652 Holliday junction resolvase DA456_RS17050 PF00156 Phosphoribosyl transferase domain DA456_RS17055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DA456_RS17055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DA456_RS17060 PF01979 Amidohydrolase family DA456_RS17075 PF00877 NlpC/P60 family DA456_RS17080 PF00437 Type II/IV secretion system protein DA456_RS17085 PF01168 Alanine racemase, N-terminal domain DA456_RS17090 PF03807 NADP oxidoreductase coenzyme F420-dependent DA456_RS17090 PF14748 Pyrroline-5-carboxylate reductase dimerisation DA456_RS17095 PF02325 YGGT family DA456_RS17100 PF00561 alpha/beta hydrolase fold DA456_RS17105 PF00561 alpha/beta hydrolase fold DA456_RS17105 PF07021 Methionine biosynthesis protein MetW DA456_RS17110 PF01725 Ham1 family DA456_RS17115 PF06969 HemN C-terminal domain DA456_RS17115 PF04055 Radical SAM superfamily DA456_RS17125 PF00920 Dehydratase family DA456_RS17130 PF00155 Aminotransferase class I and II DA456_RS17140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DA456_RS17140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DA456_RS17145 PF17042 Nucleotide-binding C-terminal domain DA456_RS17145 PF07005 Sugar-binding N-terminal domain DA456_RS17150 PF00596 Class II Aldolase and Adducin N-terminal domain DA456_RS17155 PF02447 GntP family permease DA456_RS17160 PF01261 Xylose isomerase-like TIM barrel DA456_RS17170 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DA456_RS17170 PF05221 S-adenosyl-L-homocysteine hydrolase DA456_RS17175 PF02219 Methylenetetrahydrofolate reductase DA456_RS17180 PF00271 Helicase conserved C-terminal domain DA456_RS17180 PF00270 DEAD/DEAH box helicase DA456_RS17185 PF04264 YceI-like domain DA456_RS17190 PF01292 Prokaryotic cytochrome b561 DA456_RS17195 PF01593 Flavin containing amine oxidoreductase DA456_RS17200 PF00202 Aminotransferase class-III DA456_RS17205 PF04452 RNA methyltransferase DA456_RS17210 PF03006 Haemolysin-III related DA456_RS17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS17215 PF03466 LysR substrate binding domain DA456_RS17230 PF00698 Acyl transferase domain DA456_RS17235 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DA456_RS17245 PF01039 Carboxyl transferase domain DA456_RS17250 PF06857 Malonate decarboxylase delta subunit (MdcD) DA456_RS17255 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DA456_RS17260 PF16957 Malonate decarboxylase, alpha subunit, transporter DA456_RS17270 PF13614 AAA domain DA456_RS17285 PF00550 Phosphopantetheine attachment site DA456_RS17290 PF00550 Phosphopantetheine attachment site DA456_RS17300 PF07977 FabA-like domain DA456_RS17330 PF04820 Tryptophan halogenase DA456_RS17335 PF08241 Methyltransferase domain DA456_RS17345 PF02801 Beta-ketoacyl synthase, C-terminal domain DA456_RS17345 PF00109 Beta-ketoacyl synthase, N-terminal domain DA456_RS17360 PF02801 Beta-ketoacyl synthase, C-terminal domain DA456_RS17360 PF00109 Beta-ketoacyl synthase, N-terminal domain DA456_RS17370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS17370 PF03466 LysR substrate binding domain DA456_RS17375 PF07690 Major Facilitator Superfamily DA456_RS17385 PF02447 GntP family permease DA456_RS17390 PF01380 SIS domain DA456_RS17390 PF02685 Glucokinase DA456_RS17390 PF01418 Helix-turn-helix domain, rpiR family DA456_RS17395 PF07969 Amidohydrolase family DA456_RS17400 PF01208 Uroporphyrinogen decarboxylase (URO-D) DA456_RS17410 PF01425 Amidase DA456_RS17415 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DA456_RS17415 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS17420 PF00310 Glutamine amidotransferases class-II DA456_RS17420 PF04898 Glutamate synthase central domain DA456_RS17420 PF01493 GXGXG motif DA456_RS17420 PF01645 Conserved region in glutamate synthase DA456_RS17440 PF01761 3-dehydroquinate synthase DA456_RS17445 PF01202 Shikimate kinase DA456_RS17450 PF11741 AMIN domain DA456_RS17450 PF00263 Bacterial type II and III secretion system protein DA456_RS17450 PF03958 Bacterial type II/III secretion system short domain DA456_RS17450 PF07660 Secretin and TonB N terminus short domain DA456_RS17455 PF04351 Pilus assembly protein, PilP DA456_RS17460 PF04350 Pilus assembly protein, PilO DA456_RS17465 PF05137 Fimbrial assembly protein (PilN) DA456_RS17470 PF11104 Type IV pilus assembly protein PilM; DA456_RS17475 PF17092 Penicillin-binding protein OB-like domain DA456_RS17475 PF00912 Transglycosylase DA456_RS17475 PF00905 Penicillin binding protein transpeptidase domain DA456_RS17480 PF00390 Malic enzyme, N-terminal domain DA456_RS17480 PF03949 Malic enzyme, NAD binding domain DA456_RS17485 PF00565 Staphylococcal nuclease homologue DA456_RS17490 PF01197 Ribosomal protein L31 DA456_RS17495 PF00271 Helicase conserved C-terminal domain DA456_RS17495 PF00270 DEAD/DEAH box helicase DA456_RS17495 PF18074 Primosomal protein N C-terminal domain DA456_RS17495 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DA456_RS17495 PF17764 3′ DNA-binding domain (3′BD) DA456_RS17500 PF00750 tRNA synthetases class I (R) DA456_RS17500 PF05746 DALR anticodon binding domain DA456_RS17500 PF03485 Arginyl tRNA synthetase N terminal domain DA456_RS17510 PF00227 Proteasome subunit DA456_RS17515 PF00004 ATPase family associated with various cellular activities (AAA) DA456_RS17515 PF07724 AAA domain (Cdc48 subfamily) DA456_RS17545 PF01209 ubiE/COQ5 methyltransferase family DA456_RS17555 PF03109 ABC1 family DA456_RS17560 PF01502 Phosphoribosyl-AMP cyclohydrolase DA456_RS17565 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DA456_RS17570 PF02416 mttA/Hcf106 family DA456_RS17575 PF02416 mttA/Hcf106 family DA456_RS17580 PF00902 Sec-independent protein translocase protein (TatC) DA456_RS17590 PF00672 HAMP domain DA456_RS17590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS17590 PF16591 Helical bimodular sensor domain DA456_RS17595 PF00672 HAMP domain DA456_RS17595 PF16591 Helical bimodular sensor domain DA456_RS17595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS17600 PF00535 Glycosyl transferase family 2 DA456_RS17605 PF04349 Periplasmic glucan biosynthesis protein, MdoG DA456_RS17610 PF02580 D-Tyr-tRNA(Tyr) deacylase DA456_RS17615 PF00561 alpha/beta hydrolase fold DA456_RS17620 PF00343 Carbohydrate phosphorylase DA456_RS17640 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DA456_RS17650 PF08212 Lipocalin-like domain DA456_RS17655 PF01979 Amidohydrolase family DA456_RS17660 PF00392 Bacterial regulatory proteins, gntR family DA456_RS17660 PF07702 UTRA domain DA456_RS17665 PF05962 HutD DA456_RS17670 PF06965 Na+/H+ antiporter 1 DA456_RS17680 PF04542 Sigma-70 region 2 DA456_RS17680 PF04545 Sigma-70, region 4 DA456_RS17690 PF00132 Bacterial transferase hexapeptide (six repeats) DA456_RS17695 PF00291 Pyridoxal-phosphate dependent enzyme DA456_RS17700 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS17705 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS17710 PF00005 ABC transporter DA456_RS17720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS17720 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS17725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS17725 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS17730 PF00296 Luciferase-like monooxygenase DA456_RS17745 PF03180 NLPA lipoprotein DA456_RS17750 PF09383 NIL domain DA456_RS17750 PF00005 ABC transporter DA456_RS17755 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS17770 PF00873 AcrB/AcrD/AcrF family DA456_RS17775 PF13533 Biotin-lipoyl like DA456_RS17780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS17780 PF00529 HlyD membrane-fusion protein of T1SS DA456_RS17810 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS17815 PF00005 ABC transporter DA456_RS17820 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DA456_RS17835 PF01129 NAD:arginine ADP-ribosyltransferase DA456_RS17865 PF03180 NLPA lipoprotein DA456_RS17870 PF00158 Sigma-54 interaction domain DA456_RS17880 PF07690 Major Facilitator Superfamily DA456_RS17885 PF12833 Helix-turn-helix domain DA456_RS17885 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DA456_RS17895 PF01494 FAD binding domain DA456_RS17900 PF01494 FAD binding domain DA456_RS17905 PF05195 Aminopeptidase P, N-terminal domain DA456_RS17905 PF00557 Metallopeptidase family M24 DA456_RS17910 PF03695 Uncharacterised protein family (UPF0149) DA456_RS17920 PF05164 Cell division protein ZapA DA456_RS17930 PF01812 5-formyltetrahydrofolate cyclo-ligase family DA456_RS17950 PF14765 Polyketide synthase dehydratase DA456_RS17950 PF08659 KR domain DA456_RS17950 PF00550 Phosphopantetheine attachment site DA456_RS17950 PF00109 Beta-ketoacyl synthase, N-terminal domain DA456_RS17950 PF16197 Ketoacyl-synthetase C-terminal extension DA456_RS17950 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS17950 PF00107 Zinc-binding dehydrogenase DA456_RS17950 PF02801 Beta-ketoacyl synthase, C-terminal domain DA456_RS17950 PF00698 Acyl transferase domain DA456_RS17960 PF06958 S-type Pyocin DA456_RS17965 PF01320 Colicin immunity protein / pyocin immunity protein DA456_RS17985 PF07690 Major Facilitator Superfamily DA456_RS17995 PF00111 2Fe-2S iron-sulfur cluster binding domain DA456_RS17995 PF00970 Oxidoreductase FAD-binding domain DA456_RS17995 PF00175 Oxidoreductase NAD-binding domain DA456_RS18000 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DA456_RS18005 PF07497 Rho termination factor, RNA-binding domain DA456_RS18005 PF07498 Rho termination factor, N-terminal domain DA456_RS18005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA456_RS18010 PF00085 Thioredoxin DA456_RS18015 PF00392 Bacterial regulatory proteins, gntR family DA456_RS18015 PF07729 FCD domain DA456_RS18020 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS18025 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS18030 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS18035 PF00005 ABC transporter DA456_RS18040 PF02541 Ppx/GppA phosphatase family DA456_RS18045 PF13090 Polyphosphate kinase C-terminal domain 2 DA456_RS18045 PF13089 Polyphosphate kinase N-terminal domain DA456_RS18045 PF17941 Polyphosphate kinase C-terminal domain 1 DA456_RS18045 PF02503 Polyphosphate kinase middle domain DA456_RS18050 PF00490 Delta-aminolevulinic acid dehydratase DA456_RS18055 PF09335 SNARE associated Golgi protein DA456_RS18065 PF04055 Radical SAM superfamily DA456_RS18070 PF00484 Carbonic anhydrase DA456_RS18075 PF00916 Sulfate permease family DA456_RS18075 PF01740 STAS domain DA456_RS18085 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DA456_RS18090 PF02630 SCO1/SenC DA456_RS18105 PF03180 NLPA lipoprotein DA456_RS18110 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS18115 PF00005 ABC transporter DA456_RS18115 PF09383 NIL domain DA456_RS18120 PF18011 C-terminal domain found in long catalases DA456_RS18120 PF06628 Catalase-related immune-responsive DA456_RS18120 PF00199 Catalase DA456_RS18130 PF00950 ABC 3 transport family DA456_RS18135 PF00005 ABC transporter DA456_RS18140 PF01475 Ferric uptake regulator family DA456_RS18145 PF01297 Zinc-uptake complex component A periplasmic DA456_RS18150 PF01636 Phosphotransferase enzyme family DA456_RS18160 PF01612 3'-5' exonuclease DA456_RS18160 PF00476 DNA polymerase family A DA456_RS18160 PF01367 5'-3' exonuclease, C-terminal SAM fold DA456_RS18160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DA456_RS18165 PF01926 50S ribosome-binding GTPase DA456_RS18175 PF01323 DSBA-like thioredoxin domain DA456_RS18185 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS18195 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB DA456_RS18195 PF08448 PAS fold DA456_RS18195 PF00672 HAMP domain DA456_RS18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS18195 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS18200 PF02954 Bacterial regulatory protein, Fis family DA456_RS18200 PF00072 Response regulator receiver domain DA456_RS18200 PF00158 Sigma-54 interaction domain DA456_RS18225 PF00672 HAMP domain DA456_RS18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS18225 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS18230 PF00486 Transcriptional regulatory protein, C terminal DA456_RS18230 PF00072 Response regulator receiver domain DA456_RS18235 PF00575 S1 RNA binding domain DA456_RS18235 PF16921 Tex protein YqgF-like domain DA456_RS18235 PF09371 Tex-like protein N-terminal domain DA456_RS18235 PF17674 HHH domain DA456_RS18240 PF03061 Thioesterase superfamily DA456_RS18245 PF04262 Glutamate-cysteine ligase DA456_RS18250 PF00583 Acetyltransferase (GNAT) family DA456_RS18250 PF00696 Amino acid kinase family DA456_RS18255 PF01546 Peptidase family M20/M25/M40 DA456_RS18255 PF07687 Peptidase dimerisation domain DA456_RS18265 PF13404 AsnC-type helix-turn-helix domain DA456_RS18265 PF01037 Lrp/AsnC ligand binding domain DA456_RS18275 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DA456_RS18275 PF00437 Type II/IV secretion system protein DA456_RS18285 PF01597 Glycine cleavage H-protein DA456_RS18290 PF08669 Glycine cleavage T-protein C-terminal barrel domain DA456_RS18290 PF01571 Aminomethyltransferase folate-binding domain DA456_RS18295 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS18315 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DA456_RS18315 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DA456_RS18325 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DA456_RS18335 PF01168 Alanine racemase, N-terminal domain DA456_RS18335 PF00842 Alanine racemase, C-terminal domain DA456_RS18345 PF01266 FAD dependent oxidoreductase DA456_RS18350 PF01037 Lrp/AsnC ligand binding domain DA456_RS18360 PF01266 FAD dependent oxidoreductase DA456_RS18370 PF00392 Bacterial regulatory proteins, gntR family DA456_RS18370 PF00155 Aminotransferase class I and II DA456_RS18375 PF13091 PLD-like domain DA456_RS18385 PF00171 Aldehyde dehydrogenase family DA456_RS18395 PF00471 Ribosomal protein L33 DA456_RS18400 PF00830 Ribosomal L28 family DA456_RS18405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS18410 PF04002 RadC-like JAB domain DA456_RS18415 PF04127 DNA / pantothenate metabolism flavoprotein DA456_RS18415 PF02441 Flavoprotein DA456_RS18420 PF00692 dUTPase DA456_RS18425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DA456_RS18425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DA456_RS18425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DA456_RS18425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DA456_RS18430 PF00696 Amino acid kinase family DA456_RS18445 PF00156 Phosphoribosyl transferase domain DA456_RS18450 PF03372 Endonuclease/Exonuclease/phosphatase family DA456_RS18460 PF03725 3' exoribonuclease family, domain 2 DA456_RS18460 PF01138 3' exoribonuclease family, domain 1 DA456_RS18465 PF08340 Domain of unknown function (DUF1732) DA456_RS18465 PF03755 YicC-like family, N-terminal region DA456_RS18470 PF00625 Guanylate kinase DA456_RS18475 PF01192 RNA polymerase Rpb6 DA456_RS18480 PF13291 ACT domain DA456_RS18480 PF02824 TGS domain DA456_RS18480 PF04607 Region found in RelA / SpoT proteins DA456_RS18485 PF01042 Endoribonuclease L-PSP DA456_RS18495 PF01370 NAD dependent epimerase/dehydratase family DA456_RS18500 PF01618 MotA/TolQ/ExbB proton channel family DA456_RS18505 PF02472 Biopolymer transport protein ExbD/TolR DA456_RS18510 PF03544 Gram-negative bacterial TonB protein C-terminal DA456_RS18515 PF03466 LysR substrate binding domain DA456_RS18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS18520 PF00270 DEAD/DEAH box helicase DA456_RS18520 PF00271 Helicase conserved C-terminal domain DA456_RS18520 PF17191 RecG wedge domain DA456_RS18530 PF03600 Citrate transporter DA456_RS18570 PF02146 Sir2 family DA456_RS18630 PF00145 C-5 cytosine-specific DNA methylase DA456_RS18675 PF00583 Acetyltransferase (GNAT) family DA456_RS18680 PF00106 short chain dehydrogenase DA456_RS18685 PF12833 Helix-turn-helix domain DA456_RS18685 PF06719 AraC-type transcriptional regulator N-terminus DA456_RS18695 PF04380 Membrane fusogenic activity DA456_RS18700 PF00543 Nitrogen regulatory protein P-II DA456_RS18705 PF00909 Ammonium Transporter Family DA456_RS18715 PF01894 Uncharacterised protein family UPF0047 DA456_RS18730 PF00589 Phage integrase family DA456_RS18730 PF02899 Phage integrase, N-terminal SAM-like domain DA456_RS18740 PF01678 Diaminopimelate epimerase DA456_RS18745 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DA456_RS18745 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DA456_RS18750 PF13627 Prokaryotic lipoprotein-attachment site DA456_RS18755 PF01491 Frataxin-like domain DA456_RS18765 PF01272 Transcription elongation factor, GreA/GreB, C-term DA456_RS18765 PF14760 Rnk N-terminus DA456_RS18770 PF01295 Adenylate cyclase, class-I DA456_RS18770 PF12633 Adenylate cyclase NT domain DA456_RS18785 PF13417 Glutathione S-transferase, N-terminal domain DA456_RS18785 PF14497 Glutathione S-transferase, C-terminal domain DA456_RS18790 PF00375 Sodium:dicarboxylate symporter family DA456_RS18795 PF08443 RimK-like ATP-grasp domain DA456_RS18795 PF18030 RimK PreATP-grasp domain DA456_RS18800 PF08443 RimK-like ATP-grasp domain DA456_RS18800 PF18030 RimK PreATP-grasp domain DA456_RS18805 PF00563 EAL domain DA456_RS18805 PF10442 FIST C domain DA456_RS18805 PF08495 FIST N domain DA456_RS18805 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS18810 PF01479 S4 domain DA456_RS18815 PF01430 Hsp33 protein DA456_RS18820 PF01293 Phosphoenolpyruvate carboxykinase DA456_RS18880 PF01266 FAD dependent oxidoreductase DA456_RS18885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS18890 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS18895 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS18895 PF12911 N-terminal TM domain of oligopeptide transport permease C DA456_RS18900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS18900 PF00005 ABC transporter DA456_RS18915 PF01266 FAD dependent oxidoreductase DA456_RS18920 PF01546 Peptidase family M20/M25/M40 DA456_RS18920 PF07687 Peptidase dimerisation domain DA456_RS18925 PF00171 Aldehyde dehydrogenase family DA456_RS18930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA456_RS18935 PF00202 Aminotransferase class-III DA456_RS18945 PF01037 Lrp/AsnC ligand binding domain DA456_RS18955 PF12729 Four helix bundle sensory module for signal transduction DA456_RS18955 PF00672 HAMP domain DA456_RS18955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS18960 PF00005 ABC transporter DA456_RS18960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS18965 PF12911 N-terminal TM domain of oligopeptide transport permease C DA456_RS18965 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS18970 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS18975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS18980 PF07715 TonB-dependent Receptor Plug Domain DA456_RS18980 PF00593 TonB dependent receptor DA456_RS18985 PF02472 Biopolymer transport protein ExbD/TolR DA456_RS18990 PF01618 MotA/TolQ/ExbB proton channel family DA456_RS18995 PF03544 Gram-negative bacterial TonB protein C-terminal DA456_RS19000 PF00266 Aminotransferase class-V DA456_RS19005 PF01037 Lrp/AsnC ligand binding domain DA456_RS19015 PF13419 Haloacid dehalogenase-like hydrolase DA456_RS19035 PF05656 Protein of unknown function (DUF805) DA456_RS19055 PF01791 DeoC/LacD family aldolase DA456_RS19060 PF08220 DeoR-like helix-turn-helix domain DA456_RS19060 PF00455 DeoR C terminal sensor domain DA456_RS19070 PF07690 Major Facilitator Superfamily DA456_RS19075 PF00294 pfkB family carbohydrate kinase DA456_RS19080 PF00293 NUDIX domain DA456_RS19085 PF04229 GrpB protein DA456_RS19085 PF13673 Acetyltransferase (GNAT) domain DA456_RS19130 PF06441 Epoxide hydrolase N terminus DA456_RS19140 PF17754 MftR C-terminal domain DA456_RS19140 PF00440 Bacterial regulatory proteins, tetR family DA456_RS19150 PF07690 Major Facilitator Superfamily DA456_RS19185 PF01810 LysE type translocator DA456_RS19190 PF00171 Aldehyde dehydrogenase family DA456_RS19195 PF00202 Aminotransferase class-III DA456_RS19205 PF00486 Transcriptional regulatory protein, C terminal DA456_RS19205 PF00072 Response regulator receiver domain DA456_RS19220 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS19220 PF08448 PAS fold DA456_RS19230 PF03707 Bacterial signalling protein N terminal repeat DA456_RS19230 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS19230 PF00563 EAL domain DA456_RS19245 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS19250 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS19255 PF12857 TOBE-like domain DA456_RS19255 PF00005 ABC transporter DA456_RS19265 PF01925 Sulfite exporter TauE/SafE DA456_RS19275 PF00753 Metallo-beta-lactamase superfamily DA456_RS19280 PF02954 Bacterial regulatory protein, Fis family DA456_RS19280 PF00072 Response regulator receiver domain DA456_RS19280 PF00158 Sigma-54 interaction domain DA456_RS19295 PF00156 Phosphoribosyl transferase domain DA456_RS19300 PF00580 UvrD/REP helicase N-terminal domain DA456_RS19300 PF13361 UvrD-like helicase C-terminal domain DA456_RS19305 PF03707 Bacterial signalling protein N terminal repeat DA456_RS19305 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS19305 PF00563 EAL domain DA456_RS19310 PF01554 MatE DA456_RS19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS19315 PF03466 LysR substrate binding domain DA456_RS19320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS19320 PF00672 HAMP domain DA456_RS19330 PF02690 Na+/Pi-cotransporter DA456_RS19345 PF07670 Nucleoside recognition DA456_RS19355 PF00206 Lyase DA456_RS19355 PF14698 Argininosuccinate lyase C-terminal DA456_RS19360 PF06580 Histidine kinase DA456_RS19360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS19365 PF00072 Response regulator receiver domain DA456_RS19365 PF04397 LytTr DNA-binding domain DA456_RS19370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DA456_RS19370 PF03900 Porphobilinogen deaminase, C-terminal domain DA456_RS19375 PF02602 Uroporphyrinogen-III synthase HemD DA456_RS19390 PF02600 Disulfide bond formation protein DsbB DA456_RS19400 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DA456_RS19405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DA456_RS19405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DA456_RS19425 PF12848 ABC transporter DA456_RS19425 PF00005 ABC transporter DA456_RS19435 PF01810 LysE type translocator DA456_RS19440 PF03239 Iron permease FTR1 family DA456_RS19455 PF09526 Probable metal-binding protein (DUF2387) DA456_RS19460 PF01432 Peptidase family M3 DA456_RS19465 PF00132 Bacterial transferase hexapeptide (six repeats) DA456_RS19485 PF02566 OsmC-like protein DA456_RS19490 PF00296 Luciferase-like monooxygenase DA456_RS19500 PF07311 Dodecin DA456_RS19510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS19510 PF03466 LysR substrate binding domain DA456_RS19515 PF00291 Pyridoxal-phosphate dependent enzyme DA456_RS19520 PF00290 Tryptophan synthase alpha chain DA456_RS19530 PF00561 alpha/beta hydrolase fold DA456_RS19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS19535 PF03466 LysR substrate binding domain DA456_RS19540 PF12411 Choline sulfatase enzyme C terminal DA456_RS19540 PF00884 Sulfatase DA456_RS19545 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DA456_RS19555 PF01740 STAS domain DA456_RS19555 PF00916 Sulfate permease family DA456_RS19560 PF01488 Shikimate / quinate 5-dehydrogenase DA456_RS19560 PF08501 Shikimate dehydrogenase substrate binding domain DA456_RS19560 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DA456_RS19565 PF01218 Coproporphyrinogen III oxidase DA456_RS19570 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS19570 PF00107 Zinc-binding dehydrogenase DA456_RS19575 PF01300 Telomere recombination DA456_RS19580 PF02481 DNA recombination-mediator protein A DA456_RS19580 PF17782 DprA winged helix domain DA456_RS19590 PF01327 Polypeptide deformylase DA456_RS19595 PF02911 Formyl transferase, C-terminal domain DA456_RS19595 PF00551 Formyl transferase DA456_RS19600 PF01029 NusB family DA456_RS19600 PF01189 16S rRNA methyltransferase RsmB/F DA456_RS19605 PF02080 TrkA-C domain DA456_RS19605 PF02254 TrkA-N domain DA456_RS19610 PF00384 Molybdopterin oxidoreductase DA456_RS19620 PF03352 Methyladenine glycosylase DA456_RS19625 PF02091 Glycyl-tRNA synthetase alpha subunit DA456_RS19630 PF05746 DALR anticodon binding domain DA456_RS19630 PF02092 Glycyl-tRNA synthetase beta subunit DA456_RS19650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS19650 PF18053 DNA gyrase B subunit insert domain DA456_RS19650 PF00986 DNA gyrase B subunit, carboxyl terminus DA456_RS19650 PF00204 DNA gyrase B DA456_RS19650 PF01751 Toprim domain DA456_RS19655 PF02463 RecF/RecN/SMC N terminal domain DA456_RS19660 PF02767 DNA polymerase III beta subunit, central domain DA456_RS19660 PF00712 DNA polymerase III beta subunit, N-terminal domain DA456_RS19660 PF02768 DNA polymerase III beta subunit, C-terminal domain DA456_RS19665 PF08299 Bacterial dnaA protein helix-turn-helix DA456_RS19665 PF11638 DnaA N-terminal domain DA456_RS19665 PF00308 Bacterial dnaA protein DA456_RS19670 PF00468 Ribosomal protein L34 DA456_RS19675 PF00825 Ribonuclease P DA456_RS19680 PF01809 Putative membrane protein insertion efficiency factor DA456_RS19685 PF02096 60Kd inner membrane protein DA456_RS19685 PF14849 YidC periplasmic domain DA456_RS19690 PF10396 GTP-binding protein TrmE N-terminus DA456_RS19690 PF12631 MnmE helical domain DA456_RS19690 PF01926 50S ribosome-binding GTPase DA456_RS19695 PF13932 GidA associated domain DA456_RS19695 PF01134 Glucose inhibited division protein A DA456_RS19700 PF02527 rRNA small subunit methyltransferase G DA456_RS19705 PF13614 AAA domain DA456_RS19710 PF02195 ParB-like nuclease domain DA456_RS19710 PF17762 HTH domain found in ParB protein DA456_RS19715 PF03899 ATP synthase I chain DA456_RS19720 PF00119 ATP synthase A chain DA456_RS19725 PF00137 ATP synthase subunit C DA456_RS19730 PF00430 ATP synthase B/B' CF(0) DA456_RS19735 PF00213 ATP synthase delta (OSCP) subunit DA456_RS19740 PF02874 ATP synthase alpha/beta family, beta-barrel domain DA456_RS19740 PF00306 ATP synthase alpha/beta chain, C terminal domain DA456_RS19740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA456_RS19745 PF00231 ATP synthase DA456_RS19750 PF02874 ATP synthase alpha/beta family, beta-barrel domain DA456_RS19750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA456_RS19755 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DA456_RS19755 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DA456_RS19760 PF00132 Bacterial transferase hexapeptide (six repeats) DA456_RS19760 PF14602 Hexapeptide repeat of succinyl-transferase DA456_RS19760 PF12804 MobA-like NTP transferase domain DA456_RS19775 PF00455 DeoR C terminal sensor domain DA456_RS19775 PF08220 DeoR-like helix-turn-helix domain DA456_RS19780 PF01380 SIS domain DA456_RS19785 PF06977 SdiA-regulated DA456_RS19790 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DA456_RS19795 PF02684 Lipid-A-disaccharide synthetase DA456_RS19795 PF07578 Lipid A Biosynthesis N-terminal domain DA456_RS19800 PF00535 Glycosyl transferase family 2 DA456_RS19805 PF01370 NAD dependent epimerase/dehydratase family DA456_RS19810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DA456_RS19810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DA456_RS19810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DA456_RS19815 PF01032 FecCD transport family DA456_RS19825 PF00005 ABC transporter DA456_RS19835 PF17827 PrmC N-terminal domain DA456_RS19835 PF05175 Methyltransferase small domain DA456_RS19855 PF05067 Manganese containing catalase DA456_RS19865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS19865 PF12729 Four helix bundle sensory module for signal transduction DA456_RS19865 PF00672 HAMP domain DA456_RS19870 PF16591 Helical bimodular sensor domain DA456_RS19870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS19870 PF00672 HAMP domain DA456_RS19885 PF00005 ABC transporter DA456_RS19890 PF13493 Domain of unknown function (DUF4118) DA456_RS19890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS19890 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS19890 PF00989 PAS fold DA456_RS19890 PF13426 PAS domain DA456_RS19890 PF08447 PAS fold DA456_RS19895 PF00196 Bacterial regulatory proteins, luxR family DA456_RS19895 PF00072 Response regulator receiver domain DA456_RS19900 PF01757 Acyltransferase family DA456_RS19910 PF04349 Periplasmic glucan biosynthesis protein, MdoG DA456_RS19945 PF13091 PLD-like domain DA456_RS19945 PF13396 Phospholipase_D-nuclease N-terminal DA456_RS19950 PF12276 Protein of unknown function (DUF3617) DA456_RS19955 PF01520 N-acetylmuramoyl-L-alanine amidase DA456_RS19965 PF07683 Cobalamin synthesis protein cobW C-terminal domain DA456_RS19965 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA456_RS19980 PF07683 Cobalamin synthesis protein cobW C-terminal domain DA456_RS19980 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA456_RS19990 PF08543 Phosphomethylpyrimidine kinase DA456_RS19995 PF03061 Thioesterase superfamily DA456_RS20000 PF02254 TrkA-N domain DA456_RS20000 PF00999 Sodium/hydrogen exchanger family DA456_RS20015 PF00580 UvrD/REP helicase N-terminal domain DA456_RS20015 PF13361 UvrD-like helicase C-terminal domain DA456_RS20020 PF01418 Helix-turn-helix domain, rpiR family DA456_RS20020 PF01380 SIS domain DA456_RS20035 PF03466 LysR substrate binding domain DA456_RS20035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS20040 PF02785 Biotin carboxylase C-terminal domain DA456_RS20040 PF00289 Biotin carboxylase, N-terminal domain DA456_RS20040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA456_RS20045 PF00682 HMGL-like DA456_RS20045 PF02436 Conserved carboxylase domain DA456_RS20045 PF00364 Biotin-requiring enzyme DA456_RS20070 PF00155 Aminotransferase class I and II DA456_RS20070 PF00392 Bacterial regulatory proteins, gntR family DA456_RS20075 PF04143 Sulphur transport DA456_RS20080 PF01062 Bestrophin, RFP-TM, chloride channel DA456_RS20085 PF17763 Glutaminase/Asparaginase C-terminal domain DA456_RS20085 PF00710 Asparaginase, N-terminal DA456_RS20090 PF01235 Sodium:alanine symporter family DA456_RS20095 PF10415 Fumarase C C-terminus DA456_RS20095 PF00206 Lyase DA456_RS20100 PF03466 LysR substrate binding domain DA456_RS20100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS20110 PF00731 AIR carboxylase DA456_RS20115 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DA456_RS20115 PF02222 ATP-grasp domain DA456_RS20135 PF03061 Thioesterase superfamily DA456_RS20140 PF07690 Major Facilitator Superfamily DA456_RS20145 PF12849 PBP superfamily domain DA456_RS20150 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS20155 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS20160 PF00005 ABC transporter DA456_RS20165 PF01895 PhoU domain DA456_RS20170 PF00072 Response regulator receiver domain DA456_RS20175 PF01551 Peptidase family M23 DA456_RS20175 PF08525 Opacity-associated protein A N-terminal motif DA456_RS20175 PF01476 LysM domain DA456_RS20180 PF01595 Cyclin M transmembrane N-terminal domain DA456_RS20180 PF00571 CBS domain DA456_RS20180 PF03471 Transporter associated domain DA456_RS20185 PF00989 PAS fold DA456_RS20185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS20185 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS20185 PF11808 Phosphate regulon sensor protein PhoR DA456_RS20190 PF00486 Transcriptional regulatory protein, C terminal DA456_RS20190 PF00072 Response regulator receiver domain DA456_RS20195 PF01040 UbiA prenyltransferase family DA456_RS20200 PF04345 Chorismate lyase DA456_RS20205 PF00301 Rubredoxin DA456_RS20210 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS20210 PF18113 Rubredoxin binding C-terminal domain DA456_RS20215 PF00216 Bacterial DNA-binding protein DA456_RS20255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DA456_RS20255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DA456_RS20260 PF02233 NAD(P) transhydrogenase beta subunit DA456_RS20265 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DA456_RS20270 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DA456_RS20270 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DA456_RS20275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS20275 PF03466 LysR substrate binding domain DA456_RS20280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS20280 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS20280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS20285 PF02515 CoA-transferase family III DA456_RS20330 PF13193 AMP-binding enzyme C-terminal domain DA456_RS20330 PF00501 AMP-binding enzyme DA456_RS20330 PF00975 Thioesterase domain DA456_RS20330 PF00550 Phosphopantetheine attachment site DA456_RS20330 PF00668 Condensation domain DA456_RS20345 PF00392 Bacterial regulatory proteins, gntR family DA456_RS20345 PF07729 FCD domain DA456_RS20350 PF00248 Aldo/keto reductase family DA456_RS20355 PF13419 Haloacid dehalogenase-like hydrolase DA456_RS20365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS20365 PF13426 PAS domain DA456_RS20365 PF08447 PAS fold DA456_RS20370 PF05552 Conserved TM helix DA456_RS20370 PF00924 Mechanosensitive ion channel DA456_RS20420 PF03527 RHS protein DA456_RS20420 PF05593 RHS Repeat DA456_RS20430 PF05593 RHS Repeat DA456_RS20430 PF03527 RHS protein DA456_RS20440 PF05593 RHS Repeat DA456_RS20440 PF03527 RHS protein DA456_RS20455 PF06715 Gp5 C-terminal repeat (3 copies) DA456_RS20455 PF04717 Type VI secretion system, phage-baseplate injector DA456_RS20460 PF01129 NAD:arginine ADP-ribosyltransferase DA456_RS20465 PF18660 Tsi6 DA456_RS20520 PF02824 TGS domain DA456_RS20520 PF04607 Region found in RelA / SpoT proteins DA456_RS20520 PF13291 ACT domain DA456_RS20555 PF00691 OmpA family DA456_RS20555 PF01389 OmpA-like transmembrane domain DA456_RS20565 PF06761 Intracellular multiplication and human macrophage-killing DA456_RS20565 PF14331 ImcF-related N-terminal domain DA456_RS20565 PF06744 Type VI secretion protein IcmF C-terminal DA456_RS20575 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DA456_RS20585 PF10431 C-terminal, D2-small domain, of ClpB protein DA456_RS20585 PF17871 AAA lid domain DA456_RS20585 PF07724 AAA domain (Cdc48 subfamily) DA456_RS20585 PF00004 ATPase family associated with various cellular activities (AAA) DA456_RS20595 PF05947 Type VI secretion system, TssF DA456_RS20605 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DA456_RS20635 PF16124 RecQ zinc-binding DA456_RS20635 PF00270 DEAD/DEAH box helicase DA456_RS20635 PF00570 HRDC domain DA456_RS20635 PF00271 Helicase conserved C-terminal domain DA456_RS20635 PF09382 RQC domain DA456_RS20645 PF00384 Molybdopterin oxidoreductase DA456_RS20650 PF02634 FdhD/NarQ family DA456_RS20655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS20655 PF03466 LysR substrate binding domain DA456_RS20660 PF01476 LysM domain DA456_RS20660 PF04972 BON domain DA456_RS20665 PF13419 Haloacid dehalogenase-like hydrolase DA456_RS20670 PF00293 NUDIX domain DA456_RS20675 PF00459 Inositol monophosphatase family DA456_RS20685 PF00158 Sigma-54 interaction domain DA456_RS20685 PF02954 Bacterial regulatory protein, Fis family DA456_RS20685 PF00072 Response regulator receiver domain DA456_RS20690 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS20690 PF02743 Cache domain DA456_RS20690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS20695 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DA456_RS20700 PF16363 GDP-mannose 4,6 dehydratase DA456_RS20705 PF00202 Aminotransferase class-III DA456_RS20710 PF00795 Carbon-nitrogen hydrolase DA456_RS20715 PF04371 Porphyromonas-type peptidyl-arginine deiminase DA456_RS20725 PF03573 outer membrane porin, OprD family DA456_RS20810 PF01556 DnaJ C terminal domain DA456_RS20810 PF00226 DnaJ domain DA456_RS20810 PF00684 DnaJ central domain DA456_RS20825 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS20830 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS20835 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS20840 PF00005 ABC transporter DA456_RS20855 PF00324 Amino acid permease DA456_RS20865 PF13426 PAS domain DA456_RS20865 PF08447 PAS fold DA456_RS20865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS20885 PF04362 Bacterial Fe(2+) trafficking DA456_RS20890 PF00730 HhH-GPD superfamily base excision DNA repair protein DA456_RS20890 PF14815 NUDIX domain DA456_RS20890 PF10576 Iron-sulfur binding domain of endonuclease III DA456_RS20890 PF00633 Helix-hairpin-helix motif DA456_RS20905 PF07690 Major Facilitator Superfamily DA456_RS20910 PF00155 Aminotransferase class I and II DA456_RS20915 PF00475 Imidazoleglycerol-phosphate dehydratase DA456_RS20920 PF00117 Glutamine amidotransferase class-I DA456_RS20930 PF00977 Histidine biosynthesis protein DA456_RS20935 PF00977 Histidine biosynthesis protein DA456_RS20950 PF04748 Divergent polysaccharide deacetylase DA456_RS20955 PF13180 PDZ domain DA456_RS20955 PF03572 Peptidase family S41 DA456_RS20960 PF01551 Peptidase family M23 DA456_RS20965 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DA456_RS20965 PF01676 Metalloenzyme superfamily DA456_RS20970 PF00581 Rhodanese-like domain DA456_RS20975 PF00462 Glutaredoxin DA456_RS20980 PF02556 Preprotein translocase subunit SecB DA456_RS20985 PF00588 SpoU rRNA Methylase family DA456_RS21000 PF03573 outer membrane porin, OprD family DA456_RS21005 PF00578 AhpC/TSA family DA456_RS21005 PF10417 C-terminal domain of 1-Cys peroxiredoxin DA456_RS21015 PF09084 NMT1/THI5 like DA456_RS21020 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS21025 PF00005 ABC transporter DA456_RS21030 PF03459 TOBE domain DA456_RS21030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS21055 PF00120 Glutamine synthetase, catalytic domain DA456_RS21060 PF00120 Glutamine synthetase, catalytic domain DA456_RS21065 PF00202 Aminotransferase class-III DA456_RS21070 PF13416 Bacterial extracellular solute-binding protein DA456_RS21075 PF13416 Bacterial extracellular solute-binding protein DA456_RS21080 PF00005 ABC transporter DA456_RS21080 PF08402 TOBE domain DA456_RS21085 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS21090 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS21110 PF01804 Penicillin amidase DA456_RS21140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA456_RS21140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA456_RS21140 PF01842 ACT domain DA456_RS21145 PF01565 FAD binding domain DA456_RS21145 PF02913 FAD linked oxidases, C-terminal domain DA456_RS21150 PF01557 Fumarylacetoacetate (FAA) hydrolase family DA456_RS21160 PF06977 SdiA-regulated DA456_RS21165 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DA456_RS21170 PF00291 Pyridoxal-phosphate dependent enzyme DA456_RS21170 PF00585 C-terminal regulatory domain of Threonine dehydratase DA456_RS21185 PF00293 NUDIX domain DA456_RS21190 PF05524 PEP-utilising enzyme, N-terminal DA456_RS21190 PF01590 GAF domain DA456_RS21190 PF00391 PEP-utilising enzyme, mobile domain DA456_RS21190 PF02896 PEP-utilising enzyme, TIM barrel domain DA456_RS21195 PF01790 Prolipoprotein diacylglyceryl transferase DA456_RS21200 PF00303 Thymidylate synthase DA456_RS21215 PF13411 MerR HTH family regulatory protein DA456_RS21220 PF00403 Heavy-metal-associated domain DA456_RS21230 PF01979 Amidohydrolase family DA456_RS21235 PF00324 Amino acid permease DA456_RS21240 PF00221 Aromatic amino acid lyase DA456_RS21245 PF00221 Aromatic amino acid lyase DA456_RS21250 PF00005 ABC transporter DA456_RS21250 PF00571 CBS domain DA456_RS21255 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS21265 PF17392 Urocanase C-terminal domain DA456_RS21265 PF01175 Urocanase Rossmann-like domain DA456_RS21265 PF17391 Urocanase N-terminal domain DA456_RS21275 PF02028 BCCT, betaine/carnitine/choline family transporter DA456_RS21285 PF00356 Bacterial regulatory proteins, lacI family DA456_RS21290 PF07715 TonB-dependent Receptor Plug Domain DA456_RS21290 PF00593 TonB dependent receptor DA456_RS21295 PF00296 Luciferase-like monooxygenase DA456_RS21300 PF09084 NMT1/THI5 like DA456_RS21305 PF00248 Aldo/keto reductase family DA456_RS21310 PF01425 Amidase DA456_RS21315 PF00072 Response regulator receiver domain DA456_RS21315 PF02954 Bacterial regulatory protein, Fis family DA456_RS21315 PF00158 Sigma-54 interaction domain DA456_RS21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS21320 PF00989 PAS fold DA456_RS21320 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS21340 PF01817 Chorismate mutase type II DA456_RS21345 PF00120 Glutamine synthetase, catalytic domain DA456_RS21345 PF03951 Glutamine synthetase, beta-Grasp domain DA456_RS21355 PF02568 Thiamine biosynthesis protein (ThiI) DA456_RS21355 PF02926 THUMP domain DA456_RS21360 PF03144 Elongation factor Tu domain 2 DA456_RS21360 PF00679 Elongation factor G C-terminus DA456_RS21360 PF00009 Elongation factor Tu GTP binding domain DA456_RS21365 PF08220 DeoR-like helix-turn-helix domain DA456_RS21365 PF00455 DeoR C terminal sensor domain DA456_RS21380 PF12833 Helix-turn-helix domain DA456_RS21385 PF00999 Sodium/hydrogen exchanger family DA456_RS21400 PF03573 outer membrane porin, OprD family DA456_RS21455 PF00873 AcrB/AcrD/AcrF family DA456_RS21460 PF00529 HlyD membrane-fusion protein of T1SS DA456_RS21460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS21465 PF02321 Outer membrane efflux protein DA456_RS21470 PF00072 Response regulator receiver domain DA456_RS21470 PF00486 Transcriptional regulatory protein, C terminal DA456_RS21475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS21475 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS21475 PF00672 HAMP domain DA456_RS21490 PF03120 NAD-dependent DNA ligase OB-fold domain DA456_RS21490 PF01653 NAD-dependent DNA ligase adenylation domain DA456_RS21500 PF02772 S-adenosylmethionine synthetase, central domain DA456_RS21500 PF02773 S-adenosylmethionine synthetase, C-terminal domain DA456_RS21500 PF00438 S-adenosylmethionine synthetase, N-terminal domain DA456_RS21510 PF00456 Transketolase, thiamine diphosphate binding domain DA456_RS21510 PF02780 Transketolase, C-terminal domain DA456_RS21510 PF02779 Transketolase, pyrimidine binding domain DA456_RS21515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DA456_RS21515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DA456_RS21520 PF00162 Phosphoglycerate kinase DA456_RS21540 PF01116 Fructose-bisphosphate aldolase class-II DA456_RS21565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA456_RS21570 PF02665 Nitrate reductase gamma subunit DA456_RS21570 PF02754 Cysteine-rich domain DA456_RS21570 PF13183 4Fe-4S dicluster domain DA456_RS21575 PF01012 Electron transfer flavoprotein domain DA456_RS21575 PF00766 Electron transfer flavoprotein FAD-binding domain DA456_RS21595 PF00704 Glycosyl hydrolases family 18 DA456_RS21600 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DA456_RS21600 PF00355 Rieske [2Fe-2S] domain DA456_RS21610 PF00970 Oxidoreductase FAD-binding domain DA456_RS21610 PF00175 Oxidoreductase NAD-binding domain DA456_RS21610 PF00042 Globin DA456_RS21630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DA456_RS21635 PF01625 Peptide methionine sulfoxide reductase DA456_RS21640 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS21640 PF00563 EAL domain DA456_RS21640 PF03707 Bacterial signalling protein N terminal repeat DA456_RS21645 PF07690 Major Facilitator Superfamily DA456_RS21660 PF01212 Beta-eliminating lyase DA456_RS21670 PF10672 S-adenosylmethionine-dependent methyltransferase DA456_RS21670 PF17785 PUA-like domain DA456_RS21675 PF01965 DJ-1/PfpI family DA456_RS21680 PF08668 HDOD domain DA456_RS21685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DA456_RS21685 PF06827 Zinc finger found in FPG and IleRS DA456_RS21685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DA456_RS21695 PF00037 4Fe-4S binding domain DA456_RS21700 PF01467 Cytidylyltransferase-like DA456_RS21705 PF00440 Bacterial regulatory proteins, tetR family DA456_RS21710 PF00581 Rhodanese-like domain DA456_RS21715 PF00561 alpha/beta hydrolase fold DA456_RS21730 PF05193 Peptidase M16 inactive domain DA456_RS21735 PF00675 Insulinase (Peptidase family M16) DA456_RS21735 PF05193 Peptidase M16 inactive domain DA456_RS21740 PF02881 SRP54-type protein, helical bundle domain DA456_RS21740 PF00448 SRP54-type protein, GTPase domain DA456_RS21745 PF00005 ABC transporter DA456_RS21750 PF18075 FtsX extracellular domain DA456_RS21755 PF00140 Sigma-70 factor, region 1.2 DA456_RS21755 PF04542 Sigma-70 region 2 DA456_RS21755 PF04545 Sigma-70, region 4 DA456_RS21760 PF02371 Transposase IS116/IS110/IS902 family DA456_RS21760 PF01548 Transposase DA456_RS21770 PF00912 Transglycosylase DA456_RS21775 PF04241 Protein of unknown function (DUF423) DA456_RS21780 PF05690 Thiazole biosynthesis protein ThiG DA456_RS21780 PF02597 ThiS family DA456_RS21785 PF05690 Thiazole biosynthesis protein ThiG DA456_RS21790 PF02390 Putative methyltransferase DA456_RS21800 PF00186 Dihydrofolate reductase DA456_RS21810 PF01926 50S ribosome-binding GTPase DA456_RS21810 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DA456_RS21820 PF00440 Bacterial regulatory proteins, tetR family DA456_RS21820 PF13977 BetI-type transcriptional repressor, C-terminal DA456_RS21825 PF00171 Aldehyde dehydrogenase family DA456_RS21835 PF00732 GMC oxidoreductase DA456_RS21835 PF05199 GMC oxidoreductase DA456_RS21840 PF08281 Sigma-70, region 4 DA456_RS21840 PF04542 Sigma-70 region 2 DA456_RS21845 PF16220 Domain of unknown function (DUF4880) DA456_RS21845 PF04773 FecR protein DA456_RS21860 PF00043 Glutathione S-transferase, C-terminal domain DA456_RS21860 PF13417 Glutathione S-transferase, N-terminal domain DA456_RS21870 PF01553 Acyltransferase DA456_RS21900 PF08240 Alcohol dehydrogenase GroES-like domain DA456_RS21900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DA456_RS21905 PF00551 Formyl transferase DA456_RS21910 PF04268 Sarcosine oxidase, gamma subunit family DA456_RS21915 PF08669 Glycine cleavage T-protein C-terminal barrel domain DA456_RS21915 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS21915 PF17806 Sarcosine oxidase A3 domain DA456_RS21915 PF01571 Aminomethyltransferase folate-binding domain DA456_RS21925 PF01266 FAD dependent oxidoreductase DA456_RS21930 PF00464 Serine hydroxymethyltransferase DA456_RS21935 PF00005 ABC transporter DA456_RS21935 PF00571 CBS domain DA456_RS21940 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS21945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DA456_RS21955 PF12833 Helix-turn-helix domain DA456_RS21955 PF01965 DJ-1/PfpI family DA456_RS21970 PF00672 HAMP domain DA456_RS21970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS21970 PF12729 Four helix bundle sensory module for signal transduction DA456_RS21985 PF00929 Exonuclease DA456_RS21995 PF00486 Transcriptional regulatory protein, C terminal DA456_RS21995 PF00072 Response regulator receiver domain DA456_RS22000 PF01274 Malate synthase DA456_RS22010 PF00892 EamA-like transporter family DA456_RS22020 PF01636 Phosphotransferase enzyme family DA456_RS22025 PF00356 Bacterial regulatory proteins, lacI family DA456_RS22035 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS22040 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS22045 PF00005 ABC transporter DA456_RS22045 PF08402 TOBE domain DA456_RS22050 PF00149 Calcineurin-like phosphoesterase DA456_RS22065 PF03459 TOBE domain DA456_RS22065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS22070 PF00156 Phosphoribosyl transferase domain DA456_RS22075 PF04055 Radical SAM superfamily DA456_RS22075 PF06968 Biotin and Thiamin Synthesis associated domain DA456_RS22080 PF00155 Aminotransferase class I and II DA456_RS22085 PF08241 Methyltransferase domain DA456_RS22085 PF12697 Alpha/beta hydrolase family DA456_RS22090 PF08241 Methyltransferase domain DA456_RS22105 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS22105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS22105 PF12806 Acetyl-CoA dehydrogenase C-terminal like DA456_RS22105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS22120 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS22125 PF12806 Acetyl-CoA dehydrogenase C-terminal like DA456_RS22125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS22125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA456_RS22125 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS22130 PF01679 Proteolipid membrane potential modulator DA456_RS22140 PF04055 Radical SAM superfamily DA456_RS22140 PF13186 Iron-sulfur cluster-binding domain DA456_RS22145 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DA456_RS22150 PF03070 TENA/THI-4/PQQC family DA456_RS22155 PF12706 Beta-lactamase superfamily domain DA456_RS22160 PF08042 PqqA family DA456_RS22165 PF05193 Peptidase M16 inactive domain DA456_RS22165 PF00675 Insulinase (Peptidase family M16) DA456_RS22170 PF00795 Carbon-nitrogen hydrolase DA456_RS22175 PF01593 Flavin containing amine oxidoreductase DA456_RS22215 PF00501 AMP-binding enzyme DA456_RS22215 PF13193 AMP-binding enzyme C-terminal domain DA456_RS22215 PF00668 Condensation domain DA456_RS22215 PF00550 Phosphopantetheine attachment site DA456_RS22215 PF00975 Thioesterase domain DA456_RS22225 PF01226 Formate/nitrite transporter DA456_RS22230 PF01625 Peptide methionine sulfoxide reductase DA456_RS22255 PF01638 HxlR-like helix-turn-helix DA456_RS22270 PF02899 Phage integrase, N-terminal SAM-like domain DA456_RS22270 PF00589 Phage integrase family DA456_RS22290 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DA456_RS22320 PF00589 Phage integrase family DA456_RS22330 PF00563 EAL domain DA456_RS22330 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS22330 PF03707 Bacterial signalling protein N terminal repeat DA456_RS22335 PF04546 Sigma-70, non-essential region DA456_RS22335 PF03979 Sigma-70 factor, region 1.1 DA456_RS22335 PF04545 Sigma-70, region 4 DA456_RS22335 PF04539 Sigma-70 region 3 DA456_RS22335 PF00140 Sigma-70 factor, region 1.2 DA456_RS22335 PF04542 Sigma-70 region 2 DA456_RS22340 PF10410 DnaB-helicase binding domain of primase DA456_RS22340 PF08278 DNA primase DnaG DnaB-binding DA456_RS22340 PF08275 DNA primase catalytic core, N-terminal domain DA456_RS22340 PF01807 CHC2 zinc finger DA456_RS22340 PF13662 Toprim domain DA456_RS22345 PF01165 Ribosomal protein S21 DA456_RS22350 PF00814 Glycoprotease family DA456_RS22355 PF02660 Glycerol-3-phosphate acyltransferase DA456_RS22360 PF02152 Dihydroneopterin aldolase DA456_RS22365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DA456_RS22370 PF12627 Probable RNA and SrmB- binding site of polymerase A DA456_RS22370 PF01743 Poly A polymerase head domain DA456_RS22370 PF01966 HD domain DA456_RS22375 PF04293 SpoVR like protein DA456_RS22380 PF04285 Protein of unknown function (DUF444) DA456_RS22385 PF06798 PrkA serine protein kinase C-terminal domain DA456_RS22385 PF08298 PrkA AAA domain DA456_RS22390 PF00581 Rhodanese-like domain DA456_RS22395 PF00149 Calcineurin-like phosphoesterase DA456_RS22400 PF04379 ApaG domain DA456_RS22405 PF00398 Ribosomal RNA adenine dimethylase DA456_RS22410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DA456_RS22415 PF00639 PPIC-type PPIASE domain DA456_RS22415 PF09312 SurA N-terminal domain DA456_RS22420 PF04453 LPS transport system D DA456_RS22420 PF03968 OstA-like protein DA456_RS22425 PF01636 Phosphotransferase enzyme family DA456_RS22430 PF00483 Nucleotidyl transferase DA456_RS22435 PF00226 DnaJ domain DA456_RS22435 PF05099 Tellurite resistance protein TerB DA456_RS22445 PF17200 Single Cache domain 2 DA456_RS22445 PF07730 Histidine kinase DA456_RS22450 PF00196 Bacterial regulatory proteins, luxR family DA456_RS22450 PF00072 Response regulator receiver domain DA456_RS22460 PF08402 TOBE domain DA456_RS22460 PF00005 ABC transporter DA456_RS22470 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS22475 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS22480 PF00834 Ribulose-phosphate 3 epimerase family DA456_RS22485 PF13419 Haloacid dehalogenase-like hydrolase DA456_RS22490 PF00425 chorismate binding enzyme DA456_RS22490 PF04715 Anthranilate synthase component I, N terminal region DA456_RS22500 PF00657 GDSL-like Lipase/Acylhydrolase DA456_RS22500 PF03797 Autotransporter beta-domain DA456_RS22515 PF00717 Peptidase S24-like DA456_RS22515 PF01381 Helix-turn-helix DA456_RS22560 PF04984 Phage tail sheath protein subtilisin-like domain DA456_RS22560 PF17482 Phage tail sheath C-terminal domain DA456_RS22600 PF07409 Phage protein GP46 DA456_RS22605 PF04865 Baseplate J-like protein DA456_RS22620 PF00182 Chitinase class I DA456_RS22630 PF13419 Haloacid dehalogenase-like hydrolase DA456_RS22635 PF00117 Glutamine amidotransferase class-I DA456_RS22640 PF00591 Glycosyl transferase family, a/b domain DA456_RS22640 PF02885 Glycosyl transferase family, helical bundle domain DA456_RS22645 PF00218 Indole-3-glycerol phosphate synthase DA456_RS22655 PF13545 Crp-like helix-turn-helix domain DA456_RS22655 PF00027 Cyclic nucleotide-binding domain DA456_RS22660 PF02566 OsmC-like protein DA456_RS22665 PF02675 S-adenosylmethionine decarboxylase DA456_RS22670 PF03232 Ubiquinone biosynthesis protein COQ7 DA456_RS22675 PF01230 HIT domain DA456_RS22680 PF00106 short chain dehydrogenase DA456_RS22690 PF03653 Uncharacterised protein family (UPF0093) DA456_RS22695 PF01118 Semialdehyde dehydrogenase, NAD binding domain DA456_RS22695 PF02774 Semialdehyde dehydrogenase, dimerisation domain DA456_RS22700 PF01521 Iron-sulphur cluster biosynthesis DA456_RS22705 PF03702 Anhydro-N-acetylmuramic acid kinase DA456_RS22710 PF01551 Peptidase family M23 DA456_RS22710 PF04225 Opacity-associated protein A LysM-like domain DA456_RS22720 PF01479 S4 domain DA456_RS22720 PF00579 tRNA synthetases class I (W and Y) DA456_RS22755 PF08279 HTH domain DA456_RS22755 PF03099 Biotin/lipoate A/B protein ligase family DA456_RS22755 PF02237 Biotin protein ligase C terminal domain DA456_RS22760 PF03309 Type III pantothenate kinase DA456_RS22790 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DA456_RS22795 PF00467 KOW motif DA456_RS22795 PF02357 Transcription termination factor nusG DA456_RS22800 PF00298 Ribosomal protein L11, RNA binding domain DA456_RS22800 PF03946 Ribosomal protein L11, N-terminal domain DA456_RS22805 PF00687 Ribosomal protein L1p/L10e family DA456_RS22810 PF00466 Ribosomal protein L10 DA456_RS22815 PF00542 Ribosomal protein L7/L12 C-terminal domain DA456_RS22815 PF16320 Ribosomal protein L7/L12 dimerisation domain DA456_RS22820 PF00562 RNA polymerase Rpb2, domain 6 DA456_RS22820 PF10385 RNA polymerase beta subunit external 1 domain DA456_RS22820 PF04565 RNA polymerase Rpb2, domain 3 DA456_RS22820 PF04561 RNA polymerase Rpb2, domain 2 DA456_RS22820 PF04560 RNA polymerase Rpb2, domain 7 DA456_RS22820 PF04563 RNA polymerase beta subunit DA456_RS22825 PF04998 RNA polymerase Rpb1, domain 5 DA456_RS22825 PF04997 RNA polymerase Rpb1, domain 1 DA456_RS22825 PF05000 RNA polymerase Rpb1, domain 4 DA456_RS22825 PF00623 RNA polymerase Rpb1, domain 2 DA456_RS22825 PF04983 RNA polymerase Rpb1, domain 3 DA456_RS22830 PF00164 Ribosomal protein S12/S23 DA456_RS22835 PF00177 Ribosomal protein S7p/S5e DA456_RS22840 PF03144 Elongation factor Tu domain 2 DA456_RS22840 PF14492 Elongation Factor G, domain II DA456_RS22840 PF00679 Elongation factor G C-terminus DA456_RS22840 PF03764 Elongation factor G, domain IV DA456_RS22840 PF00009 Elongation factor Tu GTP binding domain DA456_RS22845 PF03143 Elongation factor Tu C-terminal domain DA456_RS22845 PF03144 Elongation factor Tu domain 2 DA456_RS22845 PF00009 Elongation factor Tu GTP binding domain DA456_RS22850 PF00338 Ribosomal protein S10p/S20e DA456_RS22855 PF00297 Ribosomal protein L3 DA456_RS22860 PF00573 Ribosomal protein L4/L1 family DA456_RS22865 PF00276 Ribosomal protein L23 DA456_RS22870 PF03947 Ribosomal Proteins L2, C-terminal domain DA456_RS22870 PF00181 Ribosomal Proteins L2, RNA binding domain DA456_RS22875 PF00203 Ribosomal protein S19 DA456_RS22880 PF00237 Ribosomal protein L22p/L17e DA456_RS22885 PF00189 Ribosomal protein S3, C-terminal domain DA456_RS22885 PF07650 KH domain DA456_RS22890 PF00252 Ribosomal protein L16p/L10e DA456_RS22895 PF00831 Ribosomal L29 protein DA456_RS22900 PF00366 Ribosomal protein S17 DA456_RS22905 PF00238 Ribosomal protein L14p/L23e DA456_RS22910 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DA456_RS22910 PF00467 KOW motif DA456_RS22915 PF00281 Ribosomal protein L5 DA456_RS22915 PF00673 ribosomal L5P family C-terminus DA456_RS22920 PF00253 Ribosomal protein S14p/S29e DA456_RS22925 PF00410 Ribosomal protein S8 DA456_RS22930 PF00347 Ribosomal protein L6 DA456_RS22935 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DA456_RS22940 PF03719 Ribosomal protein S5, C-terminal domain DA456_RS22940 PF00333 Ribosomal protein S5, N-terminal domain DA456_RS22945 PF00327 Ribosomal protein L30p/L7e DA456_RS22950 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DA456_RS22955 PF00344 SecY translocase DA456_RS22960 PF00444 Ribosomal protein L36 DA456_RS22965 PF00416 Ribosomal protein S13/S18 DA456_RS22970 PF00411 Ribosomal protein S11 DA456_RS22975 PF01479 S4 domain DA456_RS22975 PF00163 Ribosomal protein S4/S9 N-terminal domain DA456_RS22980 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DA456_RS22980 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DA456_RS22980 PF01000 RNA polymerase Rpb3/RpoA insert domain DA456_RS22985 PF01196 Ribosomal protein L17 DA456_RS22990 PF00210 Ferritin-like domain DA456_RS22995 PF17755 UvrA DNA-binding domain DA456_RS22995 PF17760 UvrA interaction domain DA456_RS23000 PF07690 Major Facilitator Superfamily DA456_RS23005 PF00436 Single-strand binding protein family DA456_RS23015 PF00664 ABC transporter transmembrane region DA456_RS23015 PF00005 ABC transporter DA456_RS23045 PF00331 Glycosyl hydrolase family 10 DA456_RS23050 PF00459 Inositol monophosphatase family DA456_RS23055 PF03009 Glycerophosphoryl diester phosphodiesterase family DA456_RS23060 PF00005 ABC transporter DA456_RS23060 PF08402 TOBE domain DA456_RS23065 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS23070 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS23075 PF13416 Bacterial extracellular solute-binding protein DA456_RS23080 PF00480 ROK family DA456_RS23085 PF00328 Histidine phosphatase superfamily (branch 2) DA456_RS23090 PF00593 TonB dependent receptor DA456_RS23090 PF07715 TonB-dependent Receptor Plug Domain DA456_RS23095 PF02472 Biopolymer transport protein ExbD/TolR DA456_RS23100 PF01618 MotA/TolQ/ExbB proton channel family DA456_RS23110 PF00144 Beta-lactamase DA456_RS23120 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS23120 PF00563 EAL domain DA456_RS23120 PF03707 Bacterial signalling protein N terminal repeat DA456_RS23145 PF02472 Biopolymer transport protein ExbD/TolR DA456_RS23150 PF01618 MotA/TolQ/ExbB proton channel family DA456_RS23155 PF03544 Gram-negative bacterial TonB protein C-terminal DA456_RS23160 PF01557 Fumarylacetoacetate (FAA) hydrolase family DA456_RS23165 PF00561 alpha/beta hydrolase fold DA456_RS23170 PF00924 Mechanosensitive ion channel DA456_RS23180 PF01370 NAD dependent epimerase/dehydratase family DA456_RS23190 PF03922 OmpW family DA456_RS23205 PF00005 ABC transporter DA456_RS23205 PF02687 FtsX-like permease family DA456_RS23205 PF12704 MacB-like periplasmic core domain DA456_RS23225 PF00085 Thioredoxin DA456_RS23240 PF03477 ATP cone domain DA456_RS23245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DA456_RS23245 PF01872 RibD C-terminal domain DA456_RS23250 PF00677 Lumazine binding domain DA456_RS23255 PF00925 GTP cyclohydrolase II DA456_RS23255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DA456_RS23260 PF00885 6,7-dimethyl-8-ribityllumazine synthase DA456_RS23265 PF01029 NusB family DA456_RS23270 PF00586 AIR synthase related protein, N-terminal domain DA456_RS23270 PF02769 AIR synthase related protein, C-terminal domain DA456_RS23275 PF00925 GTP cyclohydrolase II DA456_RS23285 PF04955 HupE / UreJ protein DA456_RS23290 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA456_RS23295 PF01730 UreF DA456_RS23300 PF05194 UreE urease accessory protein, C-terminal domain DA456_RS23300 PF02814 UreE urease accessory protein, N-terminal domain DA456_RS23305 PF00440 Bacterial regulatory proteins, tetR family DA456_RS23310 PF05170 AsmA family DA456_RS23340 PF00892 EamA-like transporter family DA456_RS23345 PF07769 psiF repeat DA456_RS23355 PF00012 Hsp70 protein DA456_RS23360 PF00226 DnaJ domain DA456_RS23360 PF01556 DnaJ C terminal domain DA456_RS23365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS23365 PF01590 GAF domain DA456_RS23365 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS23365 PF08446 PAS fold DA456_RS23365 PF00360 Phytochrome region DA456_RS23375 PF00085 Thioredoxin DA456_RS23380 PF01979 Amidohydrolase family DA456_RS23380 PF00449 Urease alpha-subunit, N-terminal domain DA456_RS23385 PF00699 Urease beta subunit DA456_RS23390 PF13673 Acetyltransferase (GNAT) domain DA456_RS23400 PF00547 Urease, gamma subunit DA456_RS23405 PF01774 UreD urease accessory protein DA456_RS23410 PF00005 ABC transporter DA456_RS23415 PF12399 Branched-chain amino acid ATP-binding cassette transporter DA456_RS23415 PF00005 ABC transporter DA456_RS23425 PF02653 Branched-chain amino acid transport system / permease component DA456_RS23430 PF13458 Periplasmic binding protein DA456_RS23460 PF02571 Precorrin-6x reductase CbiJ/CobK DA456_RS23465 PF01888 CbiD DA456_RS23470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA456_RS23475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DA456_RS23475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DA456_RS23480 PF02570 Precorrin-8X methylmutase DA456_RS23485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA456_RS23490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA456_RS23515 PF01914 MarC family integral membrane protein DA456_RS23520 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS23520 PF01627 Hpt domain DA456_RS23520 PF00072 Response regulator receiver domain DA456_RS23520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS23520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DA456_RS23520 PF00672 HAMP domain DA456_RS23525 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DA456_RS23525 PF02844 Phosphoribosylglycinamide synthetase, N domain DA456_RS23525 PF02843 Phosphoribosylglycinamide synthetase, C domain DA456_RS23530 PF01808 AICARFT/IMPCHase bienzyme DA456_RS23530 PF02142 MGS-like domain DA456_RS23535 PF02954 Bacterial regulatory protein, Fis family DA456_RS23540 PF01207 Dihydrouridine synthase (Dus) DA456_RS23555 PF02785 Biotin carboxylase C-terminal domain DA456_RS23555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA456_RS23555 PF00289 Biotin carboxylase, N-terminal domain DA456_RS23560 PF00364 Biotin-requiring enzyme DA456_RS23565 PF01220 Dehydroquinase class II DA456_RS23570 PF02683 Cytochrome C biogenesis protein transmembrane region DA456_RS23570 PF11412 Disulphide bond corrector protein DsbC DA456_RS23595 PF00437 Type II/IV secretion system protein DA456_RS23605 PF04972 BON domain DA456_RS23605 PF13629 Pilus formation protein N terminal region DA456_RS23605 PF00263 Bacterial type II and III secretion system protein DA456_RS23620 PF00196 Bacterial regulatory proteins, luxR family DA456_RS23620 PF00072 Response regulator receiver domain DA456_RS23625 PF00912 Transglycosylase DA456_RS23625 PF00905 Penicillin binding protein transpeptidase domain DA456_RS23625 PF06832 Penicillin-Binding Protein C-terminus Family DA456_RS23635 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DA456_RS23635 PF01835 MG2 domain DA456_RS23635 PF07678 A-macroglobulin TED domain DA456_RS23635 PF07703 Alpha-2-macroglobulin bait region domain DA456_RS23635 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DA456_RS23635 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DA456_RS23635 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DA456_RS23635 PF00207 Alpha-2-macroglobulin family DA456_RS23635 PF17962 Bacterial macroglobulin domain 6 DA456_RS23640 PF01554 MatE DA456_RS23650 PF04717 Type VI secretion system, phage-baseplate injector DA456_RS23655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DA456_RS23655 PF17944 Arginine decarboxylase C-terminal helical extension DA456_RS23655 PF17810 Arginine decarboxylase helical bundle domain DA456_RS23660 PF01253 Translation initiation factor SUI1 DA456_RS23665 PF00293 NUDIX domain DA456_RS23675 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS23675 PF00072 Response regulator receiver domain DA456_RS23680 PF00072 Response regulator receiver domain DA456_RS23680 PF00196 Bacterial regulatory proteins, luxR family DA456_RS23695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS23695 PF08447 PAS fold DA456_RS23695 PF08448 PAS fold DA456_RS23705 PF09335 SNARE associated Golgi protein DA456_RS23710 PF02245 Methylpurine-DNA glycosylase (MPG) DA456_RS23715 PF00171 Aldehyde dehydrogenase family DA456_RS23720 PF01467 Cytidylyltransferase-like DA456_RS23730 PF02590 Predicted SPOUT methyltransferase DA456_RS23735 PF00905 Penicillin binding protein transpeptidase domain DA456_RS23735 PF03717 Penicillin-binding Protein dimerisation domain DA456_RS23740 PF01098 Cell cycle protein DA456_RS23745 PF13406 Transglycosylase SLT domain DA456_RS23750 PF05036 Sporulation related domain DA456_RS23750 PF03330 Lytic transglycolase DA456_RS23755 PF07943 Penicillin-binding protein 5, C-terminal domain DA456_RS23755 PF00768 D-alanyl-D-alanine carboxypeptidase DA456_RS23760 PF04359 Protein of unknown function (DUF493) DA456_RS23765 PF03099 Biotin/lipoate A/B protein ligase family DA456_RS23770 PF04055 Radical SAM superfamily DA456_RS23770 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DA456_RS23775 PF13406 Transglycosylase SLT domain DA456_RS23800 PF00133 tRNA synthetases class I (I, L, M and V) DA456_RS23800 PF13603 Leucyl-tRNA synthetase, Domain 2 DA456_RS23800 PF09334 tRNA synthetases class I (M) DA456_RS23800 PF08264 Anticodon-binding domain of tRNA DA456_RS23810 PF02698 DUF218 domain DA456_RS23815 PF00795 Carbon-nitrogen hydrolase DA456_RS23820 PF00571 CBS domain DA456_RS23820 PF03471 Transporter associated domain DA456_RS23825 PF02130 Uncharacterized protein family UPF0054 DA456_RS23830 PF02562 PhoH-like protein DA456_RS23835 PF01938 TRAM domain DA456_RS23835 PF04055 Radical SAM superfamily DA456_RS23835 PF00919 Uncharacterized protein family UPF0004 DA456_RS23850 PF00202 Aminotransferase class-III DA456_RS23860 PF02581 Thiamine monophosphate synthase DA456_RS23865 PF08543 Phosphomethylpyrimidine kinase DA456_RS23870 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS23870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DA456_RS23870 PF00672 HAMP domain DA456_RS23870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS23870 PF01627 Hpt domain DA456_RS23870 PF00072 Response regulator receiver domain DA456_RS23875 PF18158 Adaptive response protein AidB N-terminal domain DA456_RS23875 PF02770 Acyl-CoA dehydrogenase, middle domain DA456_RS23875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA456_RS23880 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DA456_RS23880 PF01048 Phosphorylase superfamily DA456_RS23885 PF00849 RNA pseudouridylate synthase DA456_RS23890 PF13404 AsnC-type helix-turn-helix domain DA456_RS23890 PF01037 Lrp/AsnC ligand binding domain DA456_RS23900 PF01545 Cation efflux family DA456_RS23900 PF16916 Dimerisation domain of Zinc Transporter DA456_RS23910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA456_RS23915 PF07859 alpha/beta hydrolase fold DA456_RS23925 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DA456_RS23935 PF01556 DnaJ C terminal domain DA456_RS23935 PF00226 DnaJ domain DA456_RS23935 PF00684 DnaJ central domain DA456_RS23940 PF00270 DEAD/DEAH box helicase DA456_RS23940 PF04408 Helicase associated domain (HA2) DA456_RS23940 PF00271 Helicase conserved C-terminal domain DA456_RS23940 PF08482 ATP-dependent helicase C-terminal DA456_RS24015 PF13289 SIR2-like domain DA456_RS24055 PF00069 Protein kinase domain DA456_RS24055 PF03793 PASTA domain DA456_RS24115 PF04408 Helicase associated domain (HA2) DA456_RS24115 PF08482 ATP-dependent helicase C-terminal DA456_RS24115 PF00270 DEAD/DEAH box helicase DA456_RS24115 PF00271 Helicase conserved C-terminal domain DA456_RS24160 PF03466 LysR substrate binding domain DA456_RS24160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS24180 PF13537 Glutamine amidotransferase domain DA456_RS24180 PF00733 Asparagine synthase DA456_RS24185 PF02801 Beta-ketoacyl synthase, C-terminal domain DA456_RS24185 PF00109 Beta-ketoacyl synthase, N-terminal domain DA456_RS24185 PF16197 Ketoacyl-synthetase C-terminal extension DA456_RS24185 PF00550 Phosphopantetheine attachment site DA456_RS24185 PF08659 KR domain DA456_RS24185 PF14765 Polyketide synthase dehydratase DA456_RS24190 PF08659 KR domain DA456_RS24190 PF16197 Ketoacyl-synthetase C-terminal extension DA456_RS24190 PF00109 Beta-ketoacyl synthase, N-terminal domain DA456_RS24190 PF14765 Polyketide synthase dehydratase DA456_RS24190 PF02801 Beta-ketoacyl synthase, C-terminal domain DA456_RS24190 PF00550 Phosphopantetheine attachment site DA456_RS24195 PF08659 KR domain DA456_RS24195 PF00550 Phosphopantetheine attachment site DA456_RS24195 PF14765 Polyketide synthase dehydratase DA456_RS24195 PF02801 Beta-ketoacyl synthase, C-terminal domain DA456_RS24195 PF16197 Ketoacyl-synthetase C-terminal extension DA456_RS24195 PF00109 Beta-ketoacyl synthase, N-terminal domain DA456_RS24195 PF08242 Methyltransferase domain DA456_RS24200 PF03060 Nitronate monooxygenase DA456_RS24200 PF00698 Acyl transferase domain DA456_RS24225 PF04072 Leucine carboxyl methyltransferase DA456_RS24250 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) DA456_RS24260 PF13307 Helicase C-terminal domain DA456_RS24260 PF04851 Type III restriction enzyme, res subunit DA456_RS24260 PF00929 Exonuclease DA456_RS24265 PF13404 AsnC-type helix-turn-helix domain DA456_RS24265 PF01037 Lrp/AsnC ligand binding domain DA456_RS24270 PF00892 EamA-like transporter family DA456_RS24275 PF00271 Helicase conserved C-terminal domain DA456_RS24275 PF00270 DEAD/DEAH box helicase DA456_RS24285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA456_RS24285 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA456_RS24290 PF00850 Histone deacetylase domain DA456_RS24295 PF13302 Acetyltransferase (GNAT) domain DA456_RS24315 PF04228 Putative neutral zinc metallopeptidase DA456_RS24320 PF07690 Major Facilitator Superfamily DA456_RS24340 PF05958 tRNA (Uracil-5-)-methyltransferase DA456_RS24345 PF00860 Permease family DA456_RS24350 PF01799 [2Fe-2S] binding domain DA456_RS24350 PF00111 2Fe-2S iron-sulfur cluster binding domain DA456_RS24355 PF03450 CO dehydrogenase flavoprotein C-terminal domain DA456_RS24355 PF00941 FAD binding domain in molybdopterin dehydrogenase DA456_RS24360 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DA456_RS24360 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DA456_RS24365 PF01654 Cytochrome bd terminal oxidase subunit I DA456_RS24370 PF02322 Cytochrome bd terminal oxidase subunit II DA456_RS24380 PF05175 Methyltransferase small domain DA456_RS24385 PF03472 Autoinducer binding domain DA456_RS24385 PF00196 Bacterial regulatory proteins, luxR family DA456_RS24390 PF00970 Oxidoreductase FAD-binding domain DA456_RS24390 PF00175 Oxidoreductase NAD-binding domain DA456_RS24400 PF01741 Large-conductance mechanosensitive channel, MscL DA456_RS24405 PF18073 Rubredoxin metal binding domain DA456_RS24410 PF07238 PilZ domain DA456_RS24415 PF02554 Carbon starvation protein CstA DA456_RS24415 PF13722 5TM C-terminal transporter carbon starvation CstA DA456_RS24420 PF04328 Selenoprotein, putative DA456_RS24425 PF07683 Cobalamin synthesis protein cobW C-terminal domain DA456_RS24425 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA456_RS24430 PF00464 Serine hydroxymethyltransferase DA456_RS24435 PF01425 Amidase DA456_RS24445 PF00072 Response regulator receiver domain DA456_RS24445 PF00196 Bacterial regulatory proteins, luxR family DA456_RS24450 PF03707 Bacterial signalling protein N terminal repeat DA456_RS24450 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS24450 PF00563 EAL domain DA456_RS24455 PF00005 ABC transporter DA456_RS24455 PF12848 ABC transporter DA456_RS24460 PF03449 Transcription elongation factor, N-terminal DA456_RS24460 PF01272 Transcription elongation factor, GreA/GreB, C-term DA456_RS24480 PF13654 AAA domain DA456_RS24480 PF05362 Lon protease (S16) C-terminal proteolytic domain DA456_RS24490 PF03350 Uncharacterized protein family, UPF0114 DA456_RS24500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DA456_RS24500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DA456_RS24505 PF12804 MobA-like NTP transferase domain DA456_RS24505 PF00132 Bacterial transferase hexapeptide (six repeats) DA456_RS24515 PF03144 Elongation factor Tu domain 2 DA456_RS24515 PF16658 Class II release factor RF3, C-terminal domain DA456_RS24515 PF00009 Elongation factor Tu GTP binding domain DA456_RS24525 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS24530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DA456_RS24535 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS24540 PF00005 ABC transporter DA456_RS24540 PF00571 CBS domain DA456_RS24550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DA456_RS24550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DA456_RS24565 PF00175 Oxidoreductase NAD-binding domain DA456_RS24565 PF00667 FAD binding domain DA456_RS24565 PF00258 Flavodoxin DA456_RS24570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS24570 PF00005 ABC transporter DA456_RS24575 PF00005 ABC transporter DA456_RS24575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA456_RS24580 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS24580 PF12911 N-terminal TM domain of oligopeptide transport permease C DA456_RS24585 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS24590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS24595 PF03573 outer membrane porin, OprD family DA456_RS24600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS24605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS24610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA456_RS24625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS24625 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS24630 PF02954 Bacterial regulatory protein, Fis family DA456_RS24630 PF00072 Response regulator receiver domain DA456_RS24640 PF00005 ABC transporter DA456_RS24640 PF06472 ABC transporter transmembrane region 2 DA456_RS24645 PF07729 FCD domain DA456_RS24645 PF00392 Bacterial regulatory proteins, gntR family DA456_RS24660 PF00701 Dihydrodipicolinate synthetase family DA456_RS24665 PF07690 Major Facilitator Superfamily DA456_RS24670 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DA456_RS24670 PF08666 SAF domain DA456_RS24690 PF01925 Sulfite exporter TauE/SafE DA456_RS24695 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS24695 PF08447 PAS fold DA456_RS24695 PF08448 PAS fold DA456_RS24695 PF00563 EAL domain DA456_RS24710 PF00672 HAMP domain DA456_RS24710 PF12729 Four helix bundle sensory module for signal transduction DA456_RS24710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA456_RS24715 PF00561 alpha/beta hydrolase fold DA456_RS24725 PF06965 Na+/H+ antiporter 1 DA456_RS24730 PF08447 PAS fold DA456_RS24735 PF00141 Peroxidase DA456_RS24745 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS24750 PF18413 Neuraminidase-like domain DA456_RS24750 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain DA456_RS24785 PF00350 Dynamin family DA456_RS24790 PF00350 Dynamin family DA456_RS24805 PF18339 RapA N-terminal Tudor like domain 1 DA456_RS24805 PF00176 SNF2 family N-terminal domain DA456_RS24805 PF12137 RNA polymerase recycling family C-terminal DA456_RS24805 PF00271 Helicase conserved C-terminal domain DA456_RS24805 PF18337 RapA N-terminal Tudor like domain DA456_RS24820 PF17854 FtsK alpha domain DA456_RS24820 PF09397 Ftsk gamma domain DA456_RS24820 PF01580 FtsK/SpoIIIE family DA456_RS24830 PF03793 PASTA domain DA456_RS24830 PF00069 Protein kinase domain DA456_RS24865 PF01668 SmpB protein DA456_RS24870 PF00209 Sodium:neurotransmitter symporter family DA456_RS24875 PF03364 Polyketide cyclase / dehydrase and lipid transport DA456_RS24880 PF03658 RnfH family Ubiquitin DA456_RS24885 PF04355 SmpA / OmlA family DA456_RS24890 PF01475 Ferric uptake regulator family DA456_RS24895 PF02463 RecF/RecN/SMC N terminal domain DA456_RS24905 PF01025 GrpE DA456_RS24910 PF00012 Hsp70 protein DA456_RS24915 PF00226 DnaJ domain DA456_RS24915 PF01556 DnaJ C terminal domain DA456_RS24915 PF00684 DnaJ central domain DA456_RS24920 PF01113 Dihydrodipicolinate reductase, N-terminus DA456_RS24920 PF05173 Dihydrodipicolinate reductase, C-terminus DA456_RS24925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DA456_RS24925 PF00117 Glutamine amidotransferase class-I DA456_RS24930 PF02142 MGS-like domain DA456_RS24930 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DA456_RS24930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA456_RS24935 PF01272 Transcription elongation factor, GreA/GreB, C-term DA456_RS24935 PF03449 Transcription elongation factor, N-terminal DA456_RS24940 PF01985 CRS1 / YhbY (CRM) domain DA456_RS24945 PF01728 FtsJ-like methyltransferase DA456_RS24950 PF00004 ATPase family associated with various cellular activities (AAA) DA456_RS24950 PF17862 AAA+ lid domain DA456_RS24950 PF06480 FtsH Extracellular DA456_RS24950 PF01434 Peptidase family M41 DA456_RS24955 PF00809 Pterin binding enzyme DA456_RS24960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DA456_RS24960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DA456_RS24960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DA456_RS24960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DA456_RS24965 PF00121 Triosephosphate isomerase DA456_RS24970 PF03840 Preprotein translocase SecG subunit DA456_RS24985 PF17384 RimP C-terminal SH3 domain DA456_RS24985 PF02576 RimP N-terminal domain DA456_RS24990 PF13184 NusA-like KH domain DA456_RS24990 PF08529 NusA N-terminal domain DA456_RS24990 PF00575 S1 RNA binding domain DA456_RS24995 PF04760 Translation initiation factor IF-2, N-terminal region DA456_RS24995 PF11987 Translation-initiation factor 2 DA456_RS24995 PF08364 Bacterial translation initiation factor IF-2 associated region DA456_RS24995 PF00009 Elongation factor Tu GTP binding domain DA456_RS25000 PF02033 Ribosome-binding factor A DA456_RS25005 PF01509 TruB family pseudouridylate synthase (N terminal domain) DA456_RS25005 PF09157 Pseudouridine synthase II TruB, C-terminal DA456_RS25005 PF16198 tRNA pseudouridylate synthase B C-terminal domain DA456_RS25010 PF00312 Ribosomal protein S15 DA456_RS25020 PF00013 KH domain DA456_RS25020 PF01138 3' exoribonuclease family, domain 1 DA456_RS25020 PF00575 S1 RNA binding domain DA456_RS25020 PF03725 3' exoribonuclease family, domain 2 DA456_RS25020 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DA456_RS25025 PF04972 BON domain DA456_RS25040 PF17785 PUA-like domain DA456_RS25040 PF10672 S-adenosylmethionine-dependent methyltransferase DA456_RS25045 PF09423 PhoD-like phosphatase DA456_RS25045 PF16655 PhoD-like phosphatase, N-terminal domain DA456_RS25055 PF02627 Carboxymuconolactone decarboxylase family DA456_RS25060 PF01699 Sodium/calcium exchanger protein DA456_RS25065 PF03330 Lytic transglycolase DA456_RS25075 PF02637 GatB domain DA456_RS25075 PF02934 GatB/GatE catalytic domain DA456_RS25080 PF01425 Amidase DA456_RS25085 PF02686 Glu-tRNAGln amidotransferase C subunit DA456_RS25095 PF04085 rod shape-determining protein MreC DA456_RS25105 PF02545 Maf-like protein DA456_RS25110 PF00575 S1 RNA binding domain DA456_RS25110 PF10150 Ribonuclease E/G family DA456_RS25120 PF00795 Carbon-nitrogen hydrolase DA456_RS25125 PF01523 Putative modulator of DNA gyrase DA456_RS25130 PF04751 Protein of unknown function (DUF615) DA456_RS25135 PF01523 Putative modulator of DNA gyrase DA456_RS25145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DA456_RS25145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DA456_RS25150 PF00381 PTS HPr component phosphorylation site DA456_RS25155 PF03668 P-loop ATPase protein family DA456_RS25160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DA456_RS25165 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DA456_RS25170 PF04552 Sigma-54, DNA binding domain DA456_RS25170 PF04963 Sigma-54 factor, core binding domain DA456_RS25170 PF00309 Sigma-54 factor, Activator interacting domain (AID) DA456_RS25175 PF00005 ABC transporter DA456_RS25175 PF12399 Branched-chain amino acid ATP-binding cassette transporter DA456_RS25180 PF03968 OstA-like protein DA456_RS25195 PF01380 SIS domain DA456_RS25195 PF00571 CBS domain DA456_RS25200 PF00005 ABC transporter DA456_RS25205 PF02405 Permease MlaE DA456_RS25210 PF02470 MlaD protein DA456_RS25215 PF05494 MlaC protein DA456_RS25230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DA456_RS25240 PF01634 ATP phosphoribosyltransferase DA456_RS25245 PF00815 Histidinol dehydrogenase DA456_RS25250 PF00155 Aminotransferase class I and II DA456_RS25255 PF13180 PDZ domain DA456_RS25260 PF01784 NIF3 (NGG1p interacting factor 3) DA456_RS25265 PF01507 Phosphoadenosine phosphosulfate reductase family DA456_RS25270 PF00009 Elongation factor Tu GTP binding domain DA456_RS25285 PF00579 tRNA synthetases class I (W and Y) DA456_RS25290 PF03969 AFG1-like ATPase DA456_RS25300 PF00572 Ribosomal protein L13 DA456_RS25305 PF00380 Ribosomal protein S9/S16 DA456_RS25310 PF00043 Glutathione S-transferase, C-terminal domain DA456_RS25310 PF02798 Glutathione S-transferase, N-terminal domain DA456_RS25315 PF04386 Stringent starvation protein B DA456_RS25320 PF04972 BON domain DA456_RS25325 PF13580 SIS domain DA456_RS25330 PF02021 Uncharacterised protein family UPF0102 DA456_RS25335 PF04348 LppC putative lipoprotein DA456_RS25340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA456_RS25350 PF02381 MraZ protein, putative antitoxin-like DA456_RS25355 PF01795 MraW methylase family DA456_RS25360 PF04999 Cell division protein FtsL DA456_RS25365 PF00905 Penicillin binding protein transpeptidase domain DA456_RS25365 PF03717 Penicillin-binding Protein dimerisation domain DA456_RS25370 PF02875 Mur ligase family, glutamate ligase domain DA456_RS25370 PF08245 Mur ligase middle domain DA456_RS25370 PF01225 Mur ligase family, catalytic domain DA456_RS25375 PF08245 Mur ligase middle domain DA456_RS25375 PF02875 Mur ligase family, glutamate ligase domain DA456_RS25375 PF01225 Mur ligase family, catalytic domain DA456_RS25380 PF00953 Glycosyl transferase family 4 DA456_RS25380 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DA456_RS25385 PF08245 Mur ligase middle domain DA456_RS25385 PF02875 Mur ligase family, glutamate ligase domain DA456_RS25390 PF01098 Cell cycle protein DA456_RS25395 PF04101 Glycosyltransferase family 28 C-terminal domain DA456_RS25395 PF03033 Glycosyltransferase family 28 N-terminal domain DA456_RS25400 PF01225 Mur ligase family, catalytic domain DA456_RS25400 PF08245 Mur ligase middle domain DA456_RS25400 PF02875 Mur ligase family, glutamate ligase domain DA456_RS25405 PF07478 D-ala D-ala ligase C-terminus DA456_RS25405 PF01820 D-ala D-ala ligase N-terminus DA456_RS25410 PF03799 Cell division protein FtsQ DA456_RS25410 PF08478 POTRA domain, FtsQ-type DA456_RS25415 PF02491 SHS2 domain inserted in FTSA DA456_RS25420 PF00091 Tubulin/FtsZ family, GTPase domain DA456_RS25420 PF12327 FtsZ family, C-terminal domain DA456_RS25425 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DA456_RS25435 PF02810 SEC-C motif DA456_RS25435 PF07516 SecA Wing and Scaffold domain DA456_RS25435 PF01043 SecA preprotein cross-linking domain DA456_RS25435 PF07517 SecA DEAD-like domain DA456_RS25440 PF01960 ArgJ family DA456_RS25450 PF00293 NUDIX domain DA456_RS25455 PF01923 Cobalamin adenosyltransferase DA456_RS25460 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS25460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS25460 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS25465 PF08546 Ketopantoate reductase PanE/ApbA C terminal DA456_RS25465 PF02558 Ketopantoate reductase PanE/ApbA DA456_RS25470 PF04461 Protein of unknown function (DUF520) DA456_RS25475 PF05552 Conserved TM helix DA456_RS25475 PF00924 Mechanosensitive ion channel DA456_RS25505 PF04717 Type VI secretion system, phage-baseplate injector DA456_RS25505 PF06715 Gp5 C-terminal repeat (3 copies) DA456_RS25515 PF07690 Major Facilitator Superfamily DA456_RS25520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DA456_RS25535 PF04186 FxsA cytoplasmic membrane protein DA456_RS25540 PF00166 Chaperonin 10 Kd subunit DA456_RS25545 PF00118 TCP-1/cpn60 chaperonin family DA456_RS25555 PF00486 Transcriptional regulatory protein, C terminal DA456_RS25555 PF00072 Response regulator receiver domain DA456_RS25560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS25560 PF08521 Two-component sensor kinase N-terminal DA456_RS25560 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS25605 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS25605 PF00563 EAL domain DA456_RS25605 PF03707 Bacterial signalling protein N terminal repeat DA456_RS25610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DA456_RS25610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DA456_RS25615 PF01810 LysE type translocator DA456_RS25620 PF03466 LysR substrate binding domain DA456_RS25620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS25635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA456_RS25640 PF07690 Major Facilitator Superfamily DA456_RS25680 PF13091 PLD-like domain DA456_RS25680 PF13396 Phospholipase_D-nuclease N-terminal DA456_RS25720 PF18807 Tripartite Tc toxins repeat DA456_RS25720 PF14431 YwqJ-like deaminase DA456_RS25725 PF03534 Salmonella virulence plasmid 65kDa B protein DA456_RS25725 PF12255 Insecticide toxin TcdB middle/C-terminal region DA456_RS25725 PF12256 Insecticide toxin TcdB middle/N-terminal region DA456_RS25730 PF18807 Tripartite Tc toxins repeat DA456_RS25730 PF05785 Rho-activating domain of cytotoxic necrotizing factor DA456_RS25735 PF05681 Fumarate hydratase (Fumerase) DA456_RS25735 PF05683 Fumarase C-terminus DA456_RS25740 PF00175 Oxidoreductase NAD-binding domain DA456_RS25745 PF02887 Pyruvate kinase, alpha/beta domain DA456_RS25745 PF00224 Pyruvate kinase, barrel domain DA456_RS25765 PF07726 ATPase family associated with various cellular activities (AAA) DA456_RS25765 PF17863 AAA lid domain DA456_RS25795 PF00929 Exonuclease DA456_RS25795 PF08411 Exonuclease C-terminal DA456_RS25805 PF00551 Formyl transferase DA456_RS25805 PF01842 ACT domain DA456_RS25815 PF01384 Phosphate transporter family DA456_RS25825 PF09339 IclR helix-turn-helix domain DA456_RS25825 PF01614 Bacterial transcriptional regulator DA456_RS25830 PF01144 Coenzyme A transferase DA456_RS25835 PF01144 Coenzyme A transferase DA456_RS25840 PF02803 Thiolase, C-terminal domain DA456_RS25840 PF00108 Thiolase, N-terminal domain DA456_RS25845 PF00083 Sugar (and other) transporter DA456_RS25850 PF02321 Outer membrane efflux protein DA456_RS25855 PF00873 AcrB/AcrD/AcrF family DA456_RS25860 PF00529 HlyD membrane-fusion protein of T1SS DA456_RS25860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA456_RS25865 PF08361 MAATS-type transcriptional repressor, C-terminal region DA456_RS25865 PF00440 Bacterial regulatory proteins, tetR family DA456_RS25880 PF07690 Major Facilitator Superfamily DA456_RS25905 PF00083 Sugar (and other) transporter DA456_RS25915 PF00012 Hsp70 protein DA456_RS25920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS25920 PF13426 PAS domain DA456_RS25920 PF00072 Response regulator receiver domain DA456_RS25925 PF02954 Bacterial regulatory protein, Fis family DA456_RS25925 PF00072 Response regulator receiver domain DA456_RS25925 PF00158 Sigma-54 interaction domain DA456_RS25930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS25930 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS25935 PF01915 Glycosyl hydrolase family 3 C-terminal domain DA456_RS25935 PF00933 Glycosyl hydrolase family 3 N terminal domain DA456_RS25935 PF14310 Fibronectin type III-like domain DA456_RS25965 PF00465 Iron-containing alcohol dehydrogenase DA456_RS25985 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DA456_RS25985 PF00413 Matrixin DA456_RS25985 PF08548 Peptidase M10 serralysin C terminal DA456_RS26000 PF00561 alpha/beta hydrolase fold DA456_RS26005 PF00849 RNA pseudouridylate synthase DA456_RS26005 PF01479 S4 domain DA456_RS26020 PF01425 Amidase DA456_RS26025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA456_RS26025 PF00289 Biotin carboxylase, N-terminal domain DA456_RS26025 PF02785 Biotin carboxylase C-terminal domain DA456_RS26030 PF09347 Domain of unknown function (DUF1989) DA456_RS26040 PF00005 ABC transporter DA456_RS26040 PF08402 TOBE domain DA456_RS26065 PF03167 Uracil DNA glycosylase superfamily DA456_RS26075 PF01970 Tripartite tricarboxylate transporter TctA family DA456_RS26095 PF00072 Response regulator receiver domain DA456_RS26095 PF00486 Transcriptional regulatory protein, C terminal DA456_RS26100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS26100 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS26110 PF01571 Aminomethyltransferase folate-binding domain DA456_RS26115 PF03937 Flavinator of succinate dehydrogenase DA456_RS26125 PF00890 FAD binding domain DA456_RS26125 PF02910 Fumarate reductase flavoprotein C-term DA456_RS26130 PF04542 Sigma-70 region 2 DA456_RS26130 PF08281 Sigma-70, region 4 DA456_RS26135 PF03872 Anti sigma-E protein RseA, N-terminal domain DA456_RS26135 PF03873 Anti sigma-E protein RseA, C-terminal domain DA456_RS26140 PF17188 MucB/RseB C-terminal domain DA456_RS26140 PF03888 MucB/RseB N-terminal domain DA456_RS26145 PF13180 PDZ domain DA456_RS26150 PF06421 GTP-binding protein LepA C-terminus DA456_RS26150 PF03144 Elongation factor Tu domain 2 DA456_RS26150 PF00009 Elongation factor Tu GTP binding domain DA456_RS26150 PF00679 Elongation factor G C-terminus DA456_RS26155 PF10502 Signal peptidase, peptidase S26 DA456_RS26165 PF00035 Double-stranded RNA binding motif DA456_RS26165 PF14622 Ribonuclease-III-like DA456_RS26170 PF01926 50S ribosome-binding GTPase DA456_RS26170 PF07650 KH domain DA456_RS26175 PF02565 Recombination protein O C terminal DA456_RS26175 PF11967 Recombination protein O N terminal DA456_RS26180 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DA456_RS26185 PF08003 Protein of unknown function (DUF1698) DA456_RS26190 PF13649 Methyltransferase domain DA456_RS26205 PF02190 ATP-dependent protease La (LON) substrate-binding domain DA456_RS26205 PF00004 ATPase family associated with various cellular activities (AAA) DA456_RS26205 PF05362 Lon protease (S16) C-terminal proteolytic domain DA456_RS26215 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS26215 PF03707 Bacterial signalling protein N terminal repeat DA456_RS26215 PF00563 EAL domain DA456_RS26225 PF01152 Bacterial-like globin DA456_RS26230 PF01548 Transposase DA456_RS26230 PF02371 Transposase IS116/IS110/IS902 family DA456_RS26235 PF07702 UTRA domain DA456_RS26235 PF00392 Bacterial regulatory proteins, gntR family DA456_RS26240 PF01425 Amidase DA456_RS26245 PF01522 Polysaccharide deacetylase DA456_RS26250 PF07690 Major Facilitator Superfamily DA456_RS26270 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA456_RS26270 PF07683 Cobalamin synthesis protein cobW C-terminal domain DA456_RS26285 PF01011 PQQ enzyme repeat DA456_RS26290 PF09905 DNA-binding protein VF530 DA456_RS26300 PF08021 Siderophore-interacting FAD-binding domain DA456_RS26300 PF04954 Siderophore-interacting protein DA456_RS26305 PF03551 Transcriptional regulator PadR-like family DA456_RS26335 PF01197 Ribosomal protein L31 DA456_RS26340 PF01820 D-ala D-ala ligase N-terminus DA456_RS26340 PF07478 D-ala D-ala ligase C-terminus DA456_RS26350 PF03466 LysR substrate binding domain DA456_RS26350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS26355 PF08267 Cobalamin-independent synthase, N-terminal domain DA456_RS26355 PF01717 Cobalamin-independent synthase, Catalytic domain DA456_RS26360 PF00561 alpha/beta hydrolase fold DA456_RS26375 PF00158 Sigma-54 interaction domain DA456_RS26375 PF00072 Response regulator receiver domain DA456_RS26375 PF02954 Bacterial regulatory protein, Fis family DA456_RS26380 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS26380 PF02743 Cache domain DA456_RS26380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS26385 PF00005 ABC transporter DA456_RS26390 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS26395 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS26400 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS26405 PF01266 FAD dependent oxidoreductase DA456_RS26405 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DA456_RS26415 PF08220 DeoR-like helix-turn-helix domain DA456_RS26415 PF00455 DeoR C terminal sensor domain DA456_RS26420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DA456_RS26420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DA456_RS26425 PF00230 Major intrinsic protein DA456_RS26430 PF04073 Aminoacyl-tRNA editing domain DA456_RS26435 PF17845 FbpC C-terminal regulatory nucleotide binding domain DA456_RS26435 PF00005 ABC transporter DA456_RS26440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DA456_RS26440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DA456_RS26450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DA456_RS26450 PF01568 Molydopterin dinucleotide binding domain DA456_RS26450 PF00384 Molybdopterin oxidoreductase DA456_RS26455 PF00462 Glutaredoxin DA456_RS26460 PF00210 Ferritin-like domain DA456_RS26465 PF04324 BFD-like [2Fe-2S] binding domain DA456_RS26470 PF00929 Exonuclease DA456_RS26475 PF01979 Amidohydrolase family DA456_RS26485 PF00764 Arginosuccinate synthase DA456_RS26495 PF00072 Response regulator receiver domain DA456_RS26495 PF00196 Bacterial regulatory proteins, luxR family DA456_RS26505 PF10576 Iron-sulfur binding domain of endonuclease III DA456_RS26505 PF00730 HhH-GPD superfamily base excision DNA repair protein DA456_RS26505 PF00633 Helix-hairpin-helix motif DA456_RS26510 PF04060 Putative Fe-S cluster DA456_RS26515 PF09334 tRNA synthetases class I (M) DA456_RS26515 PF01588 Putative tRNA binding domain DA456_RS26520 PF10609 NUBPL iron-transfer P-loop NTPase DA456_RS26525 PF00313 'Cold-shock' DNA-binding domain DA456_RS26530 PF00692 dUTPase DA456_RS26545 PF00271 Helicase conserved C-terminal domain DA456_RS26545 PF08494 DEAD/H associated DA456_RS26545 PF00270 DEAD/DEAH box helicase DA456_RS26550 PF00005 ABC transporter DA456_RS26560 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS26565 PF00528 Binding-protein-dependent transport system inner membrane component DA456_RS26570 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA456_RS26575 PF04675 DNA ligase N terminus DA456_RS26575 PF01068 ATP dependent DNA ligase domain DA456_RS26575 PF04679 ATP dependent DNA ligase C terminal region DA456_RS26580 PF04675 DNA ligase N terminus DA456_RS26580 PF01068 ATP dependent DNA ligase domain DA456_RS26580 PF04679 ATP dependent DNA ligase C terminal region DA456_RS26595 PF01804 Penicillin amidase DA456_RS26600 PF02798 Glutathione S-transferase, N-terminal domain DA456_RS26600 PF00043 Glutathione S-transferase, C-terminal domain DA456_RS26605 PF07516 SecA Wing and Scaffold domain DA456_RS26605 PF01043 SecA preprotein cross-linking domain DA456_RS26605 PF07517 SecA DEAD-like domain DA456_RS26605 PF02810 SEC-C motif DA456_RS26640 PF02810 SEC-C motif DA456_RS26655 PF00111 2Fe-2S iron-sulfur cluster binding domain DA456_RS26655 PF00970 Oxidoreductase FAD-binding domain DA456_RS26655 PF00175 Oxidoreductase NAD-binding domain DA456_RS26660 PF07478 D-ala D-ala ligase C-terminus DA456_RS26660 PF01820 D-ala D-ala ligase N-terminus DA456_RS26675 PF00892 EamA-like transporter family DA456_RS26695 PF03502 Nucleoside-specific channel-forming protein, Tsx DA456_RS26705 PF13307 Helicase C-terminal domain DA456_RS26705 PF06733 DEAD_2 DA456_RS26710 PF00144 Beta-lactamase DA456_RS26720 PF04972 BON domain DA456_RS26720 PF00691 OmpA family DA456_RS26725 PF01243 Pyridoxamine 5'-phosphate oxidase DA456_RS26725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DA456_RS26745 PF00005 ABC transporter DA456_RS26750 PF12399 Branched-chain amino acid ATP-binding cassette transporter DA456_RS26750 PF00005 ABC transporter DA456_RS26755 PF02653 Branched-chain amino acid transport system / permease component DA456_RS26755 PF11862 Domain of unknown function (DUF3382) DA456_RS26760 PF02653 Branched-chain amino acid transport system / permease component DA456_RS26765 PF13458 Periplasmic binding protein DA456_RS26780 PF03707 Bacterial signalling protein N terminal repeat DA456_RS26780 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS26780 PF00563 EAL domain DA456_RS26785 PF00271 Helicase conserved C-terminal domain DA456_RS26785 PF18339 RapA N-terminal Tudor like domain 1 DA456_RS26785 PF18337 RapA N-terminal Tudor like domain DA456_RS26785 PF00176 SNF2 family N-terminal domain DA456_RS26785 PF12137 RNA polymerase recycling family C-terminal DA456_RS26800 PF00544 Pectate lyase DA456_RS26805 PF01575 MaoC like domain DA456_RS26815 PF00501 AMP-binding enzyme DA456_RS26815 PF13193 AMP-binding enzyme C-terminal domain DA456_RS26825 PF13193 AMP-binding enzyme C-terminal domain DA456_RS26825 PF00501 AMP-binding enzyme DA456_RS26840 PF00270 DEAD/DEAH box helicase DA456_RS26840 PF04408 Helicase associated domain (HA2) DA456_RS26840 PF00271 Helicase conserved C-terminal domain DA456_RS26840 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DA456_RS26840 PF11898 Domain of unknown function (DUF3418) DA456_RS26845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DA456_RS26845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DA456_RS26860 PF00005 ABC transporter DA456_RS26860 PF00664 ABC transporter transmembrane region DA456_RS26865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DA456_RS26880 PF12708 Pectate lyase superfamily protein DA456_RS26880 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DA456_RS26880 PF13229 Right handed beta helix region DA456_RS26890 PF00892 EamA-like transporter family DA456_RS26925 PF00106 short chain dehydrogenase DA456_RS26955 PF00924 Mechanosensitive ion channel DA456_RS26965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS26965 PF03466 LysR substrate binding domain DA456_RS26970 PF07690 Major Facilitator Superfamily DA456_RS26975 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DA456_RS26980 PF02525 Flavodoxin-like fold DA456_RS26985 PF03466 LysR substrate binding domain DA456_RS26985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA456_RS26995 PF00271 Helicase conserved C-terminal domain DA456_RS26995 PF00270 DEAD/DEAH box helicase DA456_RS27025 PF13509 S1 domain DA456_RS27025 PF17783 CvfB-like winged helix domain DA456_RS27030 PF01323 DSBA-like thioredoxin domain DA456_RS27045 PF05532 CsbD-like DA456_RS27050 PF03631 Virulence factor BrkB DA456_RS27055 PF01327 Polypeptide deformylase DA456_RS27075 PF14437 MafB19-like deaminase DA456_RS27080 PF12697 Alpha/beta hydrolase family DA456_RS27085 PF07689 KaiB domain DA456_RS27085 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS27085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS27090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA456_RS27090 PF01590 GAF domain DA456_RS27090 PF08446 PAS fold DA456_RS27090 PF00512 His Kinase A (phospho-acceptor) domain DA456_RS27090 PF00360 Phytochrome region DA456_RS27100 PF07995 Glucose / Sorbosone dehydrogenase DA456_RS27115 PF08946 Osmosensory transporter coiled coil DA456_RS27115 PF00083 Sugar (and other) transporter DA456_RS27120 PF00196 Bacterial regulatory proteins, luxR family DA456_RS27120 PF00072 Response regulator receiver domain DA456_RS27140 PF05230 MASE2 domain DA456_RS27140 PF00990 Diguanylate cyclase, GGDEF domain DA456_RS27145 PF07690 Major Facilitator Superfamily DA456_RS27155 PF04333 MlaA lipoprotein DA456_RS27170 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DA456_RS27175 PF04341 Protein of unknown function, DUF485 DA456_RS27180 PF00474 Sodium:solute symporter family DA456_RS27195 PF00561 alpha/beta hydrolase fold DA456_RS27195 PF00106 short chain dehydrogenase DA456_RS27200 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DA456_RS27205 PF02599 Global regulator protein family DA456_RS27210 PF06794 Uncharacterised protein family (UPF0270) DA456_RS27215 PF05343 M42 glutamyl aminopeptidase DA456_RS27220 PF08443 RimK-like ATP-grasp domain DA456_RS27220 PF08245 Mur ligase middle domain DA456_RS27220 PF02875 Mur ligase family, glutamate ligase domain DA456_RS27225 PF00733 Asparagine synthase DA456_RS27225 PF13537 Glutamine amidotransferase domain DA456_RS27245 PF00005 ABC transporter