AOC04_RS00025 SM00116 Domain in cystathionine beta-synthase and other proteins. AOC04_RS00025 SM01091 Transporter associated domain AOC04_RS00040 SM00729 Elongator protein 3, MiaB family, Radical SAM AOC04_RS00050 SM00671 Sel1-like repeats. AOC04_RS00070 SM00387 Histidine kinase-like ATPases AOC04_RS00070 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS00070 SM00448 cheY-homologous receiver domain AOC04_RS00095 SM00344 helix_turn_helix ASNC type AOC04_RS00115 SM00487 DEAD-like helicases superfamily AOC04_RS00115 SM00490 helicase superfamily c-terminal domain AOC04_RS00115 SM00847 Helicase associated domain (HA2) Add an annotation AOC04_RS00140 SM00479 AOC04_RS00140 AOC04_RS00150 SM00487 DEAD-like helicases superfamily AOC04_RS00150 SM00490 helicase superfamily c-terminal domain AOC04_RS00280 SM01060 AOC04_RS00280 AOC04_RS00285 SM00248 ankyrin repeats AOC04_RS00290 SM00382 ATPases associated with a variety of cellular activities AOC04_RS00305 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOC04_RS00315 SM00052 Putative diguanylate phosphodiesterase AOC04_RS00315 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOC04_RS00315 SM00091 PAS domain AOC04_RS00315 SM00267 diguanylate cyclase AOC04_RS00320 SM00382 ATPases associated with a variety of cellular activities AOC04_RS00325 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOC04_RS00405 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOC04_RS00425 SM00904 Riboflavin kinase AOC04_RS00495 SM00382 ATPases associated with a variety of cellular activities AOC04_RS00495 SM01086 C-terminal, D2-small domain, of ClpB protein AOC04_RS00585 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS00585 SM00478 endonuclease III AOC04_RS00585 SM01009 AlkA N-terminal domain AOC04_RS00605 SM00644 AOC04_RS00605 AOC04_RS00620 SM00354 helix_turn _helix lactose operon repressor AOC04_RS00650 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AOC04_RS00655 SM00671 Sel1-like repeats. AOC04_RS00665 SM00116 Domain in cystathionine beta-synthase and other proteins. AOC04_RS00665 SM00382 ATPases associated with a variety of cellular activities AOC04_RS00700 SM00382 ATPases associated with a variety of cellular activities AOC04_RS00705 SM00382 ATPases associated with a variety of cellular activities AOC04_RS00745 SM00387 Histidine kinase-like ATPases AOC04_RS00745 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS00750 SM00448 cheY-homologous receiver domain AOC04_RS00755 SM00382 ATPases associated with a variety of cellular activities AOC04_RS00835 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS00855 SM00382 ATPases associated with a variety of cellular activities AOC04_RS00890 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS00935 SM00749 bacterial OsmY and nodulation domain AOC04_RS01030 SM00842 Cell division protein FtsA AOC04_RS01035 SM00864 Tubulin/FtsZ family, GTPase domain AOC04_RS01035 SM00865 Tubulin/FtsZ family, C-terminal domain AOC04_RS01045 SM00267 diguanylate cyclase AOC04_RS01060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS01060 SM00387 Histidine kinase-like ATPases AOC04_RS01060 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS01065 SM00448 cheY-homologous receiver domain AOC04_RS01065 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS01095 SM00260 Two component signalling adaptor domain AOC04_RS01095 SM00448 cheY-homologous receiver domain AOC04_RS01100 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOC04_RS01100 SM00382 ATPases associated with a variety of cellular activities AOC04_RS01175 SM00346 helix_turn_helix isocitrate lyase regulation AOC04_RS01185 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOC04_RS01190 SM00829 Enoylreductase AOC04_RS01210 SM00869 Autotransporter beta-domain AOC04_RS01225 SM00344 helix_turn_helix ASNC type AOC04_RS01250 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOC04_RS01260 SM00829 Enoylreductase AOC04_RS01270 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS01270 SM00895 AOC04_RS01270 AOC04_RS01275 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS01370 SM01323 AOC04_RS01370 AOC04_RS01425 SM00271 DnaJ molecular chaperone homology domain AOC04_RS01445 SM00562 AOC04_RS01445 AOC04_RS01455 SM00028 Tetratricopeptide repeats AOC04_RS01460 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS01480 SM00564 beta-propeller repeat AOC04_RS01500 SM00917 LeuA allosteric (dimerisation) domain AOC04_RS01530 SM00116 Domain in cystathionine beta-synthase and other proteins. AOC04_RS01530 SM01240 AOC04_RS01530 AOC04_RS01570 SM00382 ATPases associated with a variety of cellular activities AOC04_RS01570 SM00464 Found in ATP-dependent protease La (LON) AOC04_RS01575 SM00564 beta-propeller repeat AOC04_RS01660 SM00382 ATPases associated with a variety of cellular activities AOC04_RS01660 SM00448 cheY-homologous receiver domain AOC04_RS01665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS01665 SM00387 Histidine kinase-like ATPases AOC04_RS01665 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS01715 SM00382 ATPases associated with a variety of cellular activities AOC04_RS01715 SM00448 cheY-homologous receiver domain AOC04_RS01720 SM00387 Histidine kinase-like ATPases AOC04_RS01720 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS01725 SM00382 ATPases associated with a variety of cellular activities AOC04_RS01740 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS01750 SM00420 helix_turn_helix, Deoxyribose operon repressor AOC04_RS01750 SM01134 AOC04_RS01750 AOC04_RS01770 SM00382 ATPases associated with a variety of cellular activities AOC04_RS01795 SM00479 AOC04_RS01795 AOC04_RS01815 SM00421 helix_turn_helix, Lux Regulon AOC04_RS01815 SM00448 cheY-homologous receiver domain AOC04_RS01825 SM00478 endonuclease III AOC04_RS01825 SM00525 AOC04_RS01825 AOC04_RS01845 SM00357 Cold shock protein domain AOC04_RS01860 SM00382 ATPases associated with a variety of cellular activities AOC04_RS01880 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS01900 SM00769 Water Stress and Hypersensitive response AOC04_RS01935 SM00491 AOC04_RS01935 AOC04_RS02015 SM00382 ATPases associated with a variety of cellular activities AOC04_RS02020 SM00382 ATPases associated with a variety of cellular activities AOC04_RS02045 SM00052 Putative diguanylate phosphodiesterase AOC04_RS02045 SM00267 diguanylate cyclase AOC04_RS02050 SM00487 DEAD-like helicases superfamily AOC04_RS02050 SM00490 helicase superfamily c-terminal domain AOC04_RS02075 SM00346 helix_turn_helix isocitrate lyase regulation AOC04_RS02100 SM00998 Adenylosuccinate lyase C-terminus AOC04_RS02135 SM00882 Coenzyme A transferase AOC04_RS02140 SM00882 Coenzyme A transferase AOC04_RS02150 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOC04_RS02150 SM00534 ATPase domain of DNA mismatch repair MUTS family AOC04_RS02170 SM00382 ATPases associated with a variety of cellular activities AOC04_RS02190 SM01144 AOC04_RS02190 AOC04_RS02195 SM00421 helix_turn_helix, Lux Regulon AOC04_RS02195 SM00448 cheY-homologous receiver domain AOC04_RS02225 SM00363 S4 RNA-binding domain AOC04_RS02235 SM00729 Elongator protein 3, MiaB family, Radical SAM AOC04_RS02300 SM00822 AOC04_RS02300 AOC04_RS02315 SM00883 Chaperonin 10 Kd subunit AOC04_RS02330 SM00448 cheY-homologous receiver domain AOC04_RS02330 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS02335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS02335 SM00387 Histidine kinase-like ATPases AOC04_RS02335 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS02375 SM00052 Putative diguanylate phosphodiesterase AOC04_RS02375 SM00267 diguanylate cyclase AOC04_RS02420 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS02430 SM00849 Metallo-beta-lactamase superfamily AOC04_RS02450 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS02465 SM00903 Flavin reductase like domain AOC04_RS02485 SM00382 ATPases associated with a variety of cellular activities AOC04_RS02485 SM00448 cheY-homologous receiver domain AOC04_RS02490 SM00387 Histidine kinase-like ATPases AOC04_RS02490 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS02500 SM00448 cheY-homologous receiver domain AOC04_RS02500 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS02505 SM00387 Histidine kinase-like ATPases AOC04_RS02505 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS02515 SM00731 SprT homologues. AOC04_RS02570 SM00073 Histidine Phosphotransfer domain AOC04_RS02570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS02570 SM00387 Histidine kinase-like ATPases AOC04_RS02570 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS02570 SM00448 cheY-homologous receiver domain AOC04_RS02575 SM00448 cheY-homologous receiver domain AOC04_RS02575 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS02580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS02580 SM00387 Histidine kinase-like ATPases AOC04_RS02580 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS02595 SM00954 Region found in RelA / SpoT proteins AOC04_RS02700 SM00855 Phosphoglycerate mutase family AOC04_RS02710 SM00347 helix_turn_helix multiple antibiotic resistance protein AOC04_RS02750 SM00387 Histidine kinase-like ATPases AOC04_RS02750 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS02750 SM00448 cheY-homologous receiver domain AOC04_RS02760 SM00563 Phosphate acyltransferases AOC04_RS02840 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS02840 SM00895 AOC04_RS02840 AOC04_RS02880 SM00479 AOC04_RS02880 AOC04_RS02910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS02910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS02925 SM00957 SecA DEAD-like domain AOC04_RS02925 SM00958 SecA preprotein cross-linking domain AOC04_RS03005 SM00382 ATPases associated with a variety of cellular activities AOC04_RS03035 SM00382 ATPases associated with a variety of cellular activities AOC04_RS03050 SM00849 Metallo-beta-lactamase superfamily AOC04_RS03080 SM00226 Low molecular weight phosphatase family AOC04_RS03095 SM00316 Ribosomal protein S1-like RNA-binding domain AOC04_RS03100 SM00363 S4 RNA-binding domain AOC04_RS03135 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AOC04_RS03140 SM00822 AOC04_RS03140 AOC04_RS03145 SM00823 Phosphopantetheine attachment site AOC04_RS03150 SM00825 Beta-ketoacyl synthase AOC04_RS03185 SM00729 Elongator protein 3, MiaB family, Radical SAM AOC04_RS03200 SM00382 ATPases associated with a variety of cellular activities AOC04_RS03230 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOC04_RS03240 SM00346 helix_turn_helix isocitrate lyase regulation AOC04_RS03245 SM00829 Enoylreductase AOC04_RS03250 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS03260 SM00893 Electron transfer flavoprotein domain AOC04_RS03265 SM00893 Electron transfer flavoprotein domain AOC04_RS03285 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS03325 SM00563 Phosphate acyltransferases AOC04_RS03440 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS03505 SM00450 Rhodanese Homology Domain AOC04_RS03555 SM00841 Elongation factor P, C-terminal AOC04_RS03555 SM01185 AOC04_RS03555 AOC04_RS03585 SM00487 DEAD-like helicases superfamily AOC04_RS03585 SM00490 helicase superfamily c-terminal domain AOC04_RS03620 SM00387 Histidine kinase-like ATPases AOC04_RS03620 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS03620 SM00448 cheY-homologous receiver domain AOC04_RS03630 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOC04_RS03635 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOC04_RS03635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS03635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOC04_RS03640 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS03640 SM00387 Histidine kinase-like ATPases AOC04_RS03640 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS03640 SM00448 cheY-homologous receiver domain AOC04_RS03645 SM00421 helix_turn_helix, Lux Regulon AOC04_RS03645 SM00448 cheY-homologous receiver domain AOC04_RS03650 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOC04_RS03695 SM00852 Probable molybdopterin binding domain AOC04_RS03700 SM00852 Probable molybdopterin binding domain AOC04_RS03710 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOC04_RS03715 SM00260 Two component signalling adaptor domain AOC04_RS03715 SM00448 cheY-homologous receiver domain AOC04_RS03730 SM00382 ATPases associated with a variety of cellular activities AOC04_RS03760 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOC04_RS03760 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOC04_RS03760 SM00493 AOC04_RS03760 AOC04_RS03795 SM00487 DEAD-like helicases superfamily AOC04_RS03795 SM00490 helicase superfamily c-terminal domain AOC04_RS03800 SM00487 DEAD-like helicases superfamily AOC04_RS03800 SM00490 helicase superfamily c-terminal domain AOC04_RS03800 SM00982 AOC04_RS03800 AOC04_RS03800 SM01058 CarD-like/TRCF domain AOC04_RS03805 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOC04_RS03840 SM00382 ATPases associated with a variety of cellular activities AOC04_RS03850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS03850 SM00387 Histidine kinase-like ATPases AOC04_RS03850 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS03855 SM00448 cheY-homologous receiver domain AOC04_RS03855 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS03880 SM01130 AOC04_RS03880 AOC04_RS03890 SM00849 Metallo-beta-lactamase superfamily AOC04_RS03965 SM00382 ATPases associated with a variety of cellular activities AOC04_RS03965 SM01086 C-terminal, D2-small domain, of ClpB protein AOC04_RS04020 SM00421 helix_turn_helix, Lux Regulon AOC04_RS04020 SM00448 cheY-homologous receiver domain AOC04_RS04030 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS04030 SM00387 Histidine kinase-like ATPases AOC04_RS04030 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS04030 SM00448 cheY-homologous receiver domain AOC04_RS04035 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS04035 SM00387 Histidine kinase-like ATPases AOC04_RS04035 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS04035 SM00448 cheY-homologous receiver domain AOC04_RS04040 SM00421 helix_turn_helix, Lux Regulon AOC04_RS04040 SM00448 cheY-homologous receiver domain AOC04_RS04045 SM00421 helix_turn_helix, Lux Regulon AOC04_RS04045 SM00448 cheY-homologous receiver domain AOC04_RS04085 SM01230 AOC04_RS04085 AOC04_RS04100 SM00341 Helicase and RNase D C-terminal AOC04_RS04100 SM00474 3'-5' exonuclease AOC04_RS04150 SM00387 Histidine kinase-like ATPases AOC04_RS04150 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS04155 SM00448 cheY-homologous receiver domain AOC04_RS04155 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS04170 SM00880 AOC04_RS04170 AOC04_RS04185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS04185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS04220 SM00382 ATPases associated with a variety of cellular activities AOC04_RS04300 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS04310 SM00671 Sel1-like repeats. AOC04_RS04315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOC04_RS04315 SM00245 tail specific protease AOC04_RS04320 SM00829 Enoylreductase AOC04_RS04330 SM00382 ATPases associated with a variety of cellular activities AOC04_RS04355 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS04355 SM00866 AOC04_RS04355 AOC04_RS04465 SM00861 Transketolase, pyrimidine binding domain AOC04_RS04485 SM00881 CoA binding domain AOC04_RS04500 SM00387 Histidine kinase-like ATPases AOC04_RS04600 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOC04_RS04600 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOC04_RS04605 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AOC04_RS04645 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AOC04_RS04675 SM00357 Cold shock protein domain AOC04_RS04685 SM00382 ATPases associated with a variety of cellular activities AOC04_RS04685 SM01086 C-terminal, D2-small domain, of ClpB protein AOC04_RS04690 SM00316 Ribosomal protein S1-like RNA-binding domain AOC04_RS04705 SM00843 AOC04_RS04705 AOC04_RS04715 SM00382 ATPases associated with a variety of cellular activities AOC04_RS04750 SM00421 helix_turn_helix, Lux Regulon AOC04_RS04750 SM00448 cheY-homologous receiver domain AOC04_RS04780 SM00450 Rhodanese Homology Domain AOC04_RS04790 SM00382 ATPases associated with a variety of cellular activities AOC04_RS04795 SM00052 Putative diguanylate phosphodiesterase AOC04_RS04795 SM00091 PAS domain AOC04_RS04795 SM00267 diguanylate cyclase AOC04_RS04830 SM00434 DNA Topoisomerase IV AOC04_RS04840 SM00830 Chorismate mutase type II AOC04_RS04860 SM00316 Ribosomal protein S1-like RNA-binding domain AOC04_RS04865 SM00411 bacterial (prokaryotic) histone like domain AOC04_RS04880 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AOC04_RS04945 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AOC04_RS04950 SM00829 Enoylreductase AOC04_RS04965 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS04965 SM00895 AOC04_RS04965 AOC04_RS04980 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AOC04_RS04985 SM01092 CO dehydrogenase flavoprotein C-terminal domain AOC04_RS04990 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS04995 SM00968 SMC proteins Flexible Hinge Domain AOC04_RS05000 SM00771 ZipA, C-terminal domain (FtsZ-binding) AOC04_RS05005 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOC04_RS05005 SM00292 breast cancer carboxy-terminal domain AOC04_RS05005 SM00532 Ligase N family AOC04_RS05015 SM00382 ATPases associated with a variety of cellular activities AOC04_RS05025 SM00493 AOC04_RS05025 AOC04_RS05035 SM00100 Cyclic nucleotide-monophosphate binding domain AOC04_RS05035 SM00419 helix_turn_helix, cAMP Regulatory protein AOC04_RS05045 SM00729 Elongator protein 3, MiaB family, Radical SAM AOC04_RS05120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS05170 SM00479 AOC04_RS05170 AOC04_RS05200 SM00448 cheY-homologous receiver domain AOC04_RS05200 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS05205 SM00387 Histidine kinase-like ATPases AOC04_RS05205 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS05225 SM00382 ATPases associated with a variety of cellular activities AOC04_RS05410 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS05450 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS05485 SM00028 Tetratricopeptide repeats AOC04_RS05540 SM00448 cheY-homologous receiver domain AOC04_RS05540 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS05545 SM00387 Histidine kinase-like ATPases AOC04_RS05545 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS05560 SM00858 AOC04_RS05560 AOC04_RS05650 SM00382 ATPases associated with a variety of cellular activities AOC04_RS05680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS05695 SM00642 Alpha-amylase domain AOC04_RS05700 SM00642 Alpha-amylase domain AOC04_RS05705 SM00642 Alpha-amylase domain AOC04_RS05725 SM00448 cheY-homologous receiver domain AOC04_RS05725 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS05730 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS05745 SM00155 Phospholipase D. Active site motifs. AOC04_RS05780 SM00642 Alpha-amylase domain AOC04_RS05790 SM00642 Alpha-amylase domain AOC04_RS05800 SM00642 Alpha-amylase domain AOC04_RS05815 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS05820 SM00829 Enoylreductase AOC04_RS05825 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOC04_RS05850 SM00965 Secretin and TonB N terminus short domain AOC04_RS05915 SM00267 diguanylate cyclase AOC04_RS05970 SM00382 ATPases associated with a variety of cellular activities AOC04_RS06005 SM00382 ATPases associated with a variety of cellular activities AOC04_RS06015 SM00564 beta-propeller repeat AOC04_RS06075 SM00829 Enoylreductase AOC04_RS06085 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS06150 SM00640 Glycosyl hydrolases family 32 AOC04_RS06155 SM00354 helix_turn _helix lactose operon repressor AOC04_RS06185 SM00849 Metallo-beta-lactamase superfamily AOC04_RS06215 SM00382 ATPases associated with a variety of cellular activities AOC04_RS06235 SM00822 AOC04_RS06235 AOC04_RS06270 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOC04_RS06290 SM00422 helix_turn_helix, mercury resistance AOC04_RS06305 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOC04_RS06355 SM01321 AOC04_RS06355 AOC04_RS06390 SM00822 AOC04_RS06390 AOC04_RS06425 SM00421 helix_turn_helix, Lux Regulon AOC04_RS06445 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS06455 SM00947 Carbonic anhydrase AOC04_RS06465 SM00346 helix_turn_helix isocitrate lyase regulation AOC04_RS06485 SM00893 Electron transfer flavoprotein domain AOC04_RS06490 SM00893 Electron transfer flavoprotein domain AOC04_RS06515 SM00822 AOC04_RS06515 AOC04_RS06545 SM00822 AOC04_RS06545 AOC04_RS06560 SM00421 helix_turn_helix, Lux Regulon AOC04_RS06560 SM00448 cheY-homologous receiver domain AOC04_RS06585 SM00382 ATPases associated with a variety of cellular activities AOC04_RS06620 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS06630 SM00882 Coenzyme A transferase AOC04_RS06635 SM00882 Coenzyme A transferase AOC04_RS06675 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS06725 SM00387 Histidine kinase-like ATPases AOC04_RS06725 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS06730 SM00448 cheY-homologous receiver domain AOC04_RS06730 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS06765 SM00382 ATPases associated with a variety of cellular activities AOC04_RS06805 SM00421 helix_turn_helix, Lux Regulon AOC04_RS06820 SM00382 ATPases associated with a variety of cellular activities AOC04_RS06825 SM00382 ATPases associated with a variety of cellular activities AOC04_RS06850 SM00822 AOC04_RS06850 AOC04_RS06855 SM00354 helix_turn _helix lactose operon repressor AOC04_RS06865 SM00354 helix_turn _helix lactose operon repressor AOC04_RS06905 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS06905 SM00895 AOC04_RS06905 AOC04_RS06935 SM00421 helix_turn_helix, Lux Regulon AOC04_RS06935 SM00448 cheY-homologous receiver domain AOC04_RS06940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOC04_RS06940 SM00387 Histidine kinase-like ATPases AOC04_RS06950 SM00382 ATPases associated with a variety of cellular activities AOC04_RS07015 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS07020 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS07080 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS07080 SM00895 AOC04_RS07080 AOC04_RS07115 SM01060 AOC04_RS07115 AOC04_RS07145 SM00028 Tetratricopeptide repeats AOC04_RS07150 SM00327 von Willebrand factor (vWF) type A domain AOC04_RS07200 SM00331 Sigma factor PP2C-like phosphatases AOC04_RS07200 SM00448 cheY-homologous receiver domain AOC04_RS07315 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS07470 SM00232 JAB/MPN domain AOC04_RS07605 SM00564 beta-propeller repeat AOC04_RS07620 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS07670 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS07695 SM00420 helix_turn_helix, Deoxyribose operon repressor AOC04_RS07695 SM01134 AOC04_RS07695 AOC04_RS07720 SM00382 ATPases associated with a variety of cellular activities AOC04_RS07725 SM00382 ATPases associated with a variety of cellular activities AOC04_RS07730 SM00822 AOC04_RS07730 AOC04_RS07735 SM00354 helix_turn _helix lactose operon repressor AOC04_RS07750 SM00382 ATPases associated with a variety of cellular activities AOC04_RS07755 SM01230 AOC04_RS07755 AOC04_RS07765 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS07835 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOC04_RS07845 SM00822 AOC04_RS07845 AOC04_RS07850 SM00903 Flavin reductase like domain AOC04_RS07880 SM00822 AOC04_RS07880 AOC04_RS07910 SM00822 AOC04_RS07910 AOC04_RS08005 SM00849 Metallo-beta-lactamase superfamily AOC04_RS08030 SM00882 Coenzyme A transferase AOC04_RS08070 SM00855 Phosphoglycerate mutase family AOC04_RS08095 SM01018 B12 binding domain AOC04_RS08130 SM00448 cheY-homologous receiver domain AOC04_RS08135 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOC04_RS08135 SM00387 Histidine kinase-like ATPases AOC04_RS08135 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS08135 SM00448 cheY-homologous receiver domain AOC04_RS08140 SM00138 Methyltransferase, chemotaxis proteins AOC04_RS08150 SM00387 Histidine kinase-like ATPases AOC04_RS08150 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS08150 SM00448 cheY-homologous receiver domain AOC04_RS08155 SM00448 cheY-homologous receiver domain AOC04_RS08160 SM00028 Tetratricopeptide repeats AOC04_RS08275 SM00382 ATPases associated with a variety of cellular activities AOC04_RS08280 SM00382 ATPases associated with a variety of cellular activities AOC04_RS08295 SM00382 ATPases associated with a variety of cellular activities AOC04_RS08335 SM00382 ATPases associated with a variety of cellular activities AOC04_RS08375 SM00829 Enoylreductase AOC04_RS08380 SM00990 AOC04_RS08380 AOC04_RS08385 SM00488 AOC04_RS08385 AOC04_RS08385 SM00491 AOC04_RS08385 AOC04_RS08395 SM01119 AOC04_RS08395 AOC04_RS08405 SM00387 Histidine kinase-like ATPases AOC04_RS08405 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS08430 SM00382 ATPases associated with a variety of cellular activities AOC04_RS08450 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS08465 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOC04_RS08475 SM00382 ATPases associated with a variety of cellular activities AOC04_RS08490 SM00382 ATPases associated with a variety of cellular activities AOC04_RS08545 SM00984 UDP binding domain AOC04_RS08630 SM00052 Putative diguanylate phosphodiesterase AOC04_RS08655 SM00448 cheY-homologous receiver domain AOC04_RS08655 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS08690 SM00155 Phospholipase D. Active site motifs. AOC04_RS08760 SM01092 CO dehydrogenase flavoprotein C-terminal domain AOC04_RS08765 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AOC04_RS08780 SM00882 Coenzyme A transferase AOC04_RS08785 SM00882 Coenzyme A transferase AOC04_RS08825 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS08890 SM00448 cheY-homologous receiver domain AOC04_RS08890 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS08895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS08895 SM00387 Histidine kinase-like ATPases AOC04_RS08895 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS08900 SM00267 diguanylate cyclase AOC04_RS08910 SM00052 Putative diguanylate phosphodiesterase AOC04_RS08945 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AOC04_RS08960 SM00564 beta-propeller repeat AOC04_RS08970 SM00564 beta-propeller repeat AOC04_RS08975 SM01091 Transporter associated domain AOC04_RS09020 SM00831 Cation transporter/ATPase, N-terminus AOC04_RS09040 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS09100 SM00028 Tetratricopeptide repeats AOC04_RS09155 SM00382 ATPases associated with a variety of cellular activities AOC04_RS09175 SM01004 Delta-aminolevulinic acid dehydratase AOC04_RS09180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOC04_RS09185 SM00829 Enoylreductase AOC04_RS09195 SM00460 Transglutaminase/protease-like homologues AOC04_RS09225 SM00829 Enoylreductase AOC04_RS09250 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS09250 SM00895 AOC04_RS09250 AOC04_RS09280 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS09290 SM00830 Chorismate mutase type II AOC04_RS09330 SM00267 diguanylate cyclase AOC04_RS09335 SM00382 ATPases associated with a variety of cellular activities AOC04_RS09375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS09375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS09375 SM01049 AOC04_RS09375 AOC04_RS09400 SM00382 ATPases associated with a variety of cellular activities AOC04_RS09410 SM00235 Zinc-dependent metalloprotease AOC04_RS09415 SM00354 helix_turn _helix lactose operon repressor AOC04_RS09455 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS09560 SM00382 ATPases associated with a variety of cellular activities AOC04_RS09595 SM00382 ATPases associated with a variety of cellular activities AOC04_RS09600 SM00382 ATPases associated with a variety of cellular activities AOC04_RS09645 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS09660 SM01005 Alanine racemase, C-terminal domain AOC04_RS09675 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS09705 SM00052 Putative diguanylate phosphodiesterase AOC04_RS09705 SM00267 diguanylate cyclase AOC04_RS09705 SM00448 cheY-homologous receiver domain AOC04_RS09710 SM00422 helix_turn_helix, mercury resistance AOC04_RS09730 SM00226 Low molecular weight phosphatase family AOC04_RS09745 SM00984 UDP binding domain AOC04_RS09790 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS09810 SM00710 Parallel beta-helix repeats AOC04_RS09825 SM00867 YceI-like domain AOC04_RS09855 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS09925 SM00267 diguanylate cyclase AOC04_RS09930 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS09945 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS09965 SM00382 ATPases associated with a variety of cellular activities AOC04_RS09990 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS10065 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOC04_RS10070 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOC04_RS10075 SM01329 AOC04_RS10075 AOC04_RS10100 SM00052 Putative diguanylate phosphodiesterase AOC04_RS10100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOC04_RS10100 SM00091 PAS domain AOC04_RS10100 SM00267 diguanylate cyclase AOC04_RS10115 SM00965 Secretin and TonB N terminus short domain AOC04_RS10155 SM00965 Secretin and TonB N terminus short domain AOC04_RS10175 SM00052 Putative diguanylate phosphodiesterase AOC04_RS10175 SM00267 diguanylate cyclase AOC04_RS10190 SM00448 cheY-homologous receiver domain AOC04_RS10190 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS10195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS10195 SM00387 Histidine kinase-like ATPases AOC04_RS10200 SM00382 ATPases associated with a variety of cellular activities AOC04_RS10240 SM00382 ATPases associated with a variety of cellular activities AOC04_RS10245 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS10295 SM00953 AOC04_RS10295 AOC04_RS10310 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS10320 SM00564 beta-propeller repeat AOC04_RS10370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOC04_RS10370 SM00387 Histidine kinase-like ATPases AOC04_RS10370 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS10370 SM00448 cheY-homologous receiver domain AOC04_RS10395 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS10405 SM00382 ATPases associated with a variety of cellular activities AOC04_RS10445 SM00382 ATPases associated with a variety of cellular activities AOC04_RS10450 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS10490 SM00487 DEAD-like helicases superfamily AOC04_RS10490 SM00490 helicase superfamily c-terminal domain AOC04_RS10505 SM00965 Secretin and TonB N terminus short domain AOC04_RS10520 SM00382 ATPases associated with a variety of cellular activities AOC04_RS10535 SM00823 Phosphopantetheine attachment site AOC04_RS10540 SM00823 Phosphopantetheine attachment site AOC04_RS10545 SM00823 Phosphopantetheine attachment site AOC04_RS10550 SM00823 Phosphopantetheine attachment site AOC04_RS10570 SM00382 ATPases associated with a variety of cellular activities AOC04_RS10585 SM01006 Siderophore biosynthesis protein domain AOC04_RS10595 SM00923 MbtH-like protein AOC04_RS10645 SM00988 UreE urease accessory protein, N-terminal domain AOC04_RS10695 SM00486 DNA polymerase type-B family AOC04_RS10735 SM00327 von Willebrand factor (vWF) type A domain AOC04_RS10740 SM00028 Tetratricopeptide repeats AOC04_RS10740 SM00327 von Willebrand factor (vWF) type A domain AOC04_RS10765 SM00028 Tetratricopeptide repeats AOC04_RS10770 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS10770 SM00895 AOC04_RS10770 AOC04_RS10780 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOC04_RS10870 SM00344 helix_turn_helix ASNC type AOC04_RS10920 SM00344 helix_turn_helix ASNC type AOC04_RS10945 SM00829 Enoylreductase AOC04_RS11020 SM00382 ATPases associated with a variety of cellular activities AOC04_RS11020 SM01086 C-terminal, D2-small domain, of ClpB protein AOC04_RS11055 SM01276 AOC04_RS11055 AOC04_RS11090 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS11090 SM00895 AOC04_RS11090 AOC04_RS11100 SM00382 ATPases associated with a variety of cellular activities AOC04_RS11105 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS11130 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOC04_RS11150 SM00382 ATPases associated with a variety of cellular activities AOC04_RS11160 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS11160 SM00895 AOC04_RS11160 AOC04_RS11180 SM01007 Class II Aldolase and Adducin N-terminal domain AOC04_RS11210 SM00346 helix_turn_helix isocitrate lyase regulation AOC04_RS11240 SM00869 Autotransporter beta-domain AOC04_RS11295 SM00903 Flavin reductase like domain AOC04_RS11350 SM00382 ATPases associated with a variety of cellular activities AOC04_RS11355 SM00382 ATPases associated with a variety of cellular activities AOC04_RS11360 SM00347 helix_turn_helix multiple antibiotic resistance protein AOC04_RS11375 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOC04_RS11425 SM00487 DEAD-like helicases superfamily AOC04_RS11605 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS11610 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS11660 SM00422 helix_turn_helix, mercury resistance AOC04_RS11665 SM00411 bacterial (prokaryotic) histone like domain AOC04_RS11670 SM00873 B3/4 domain AOC04_RS11670 SM00874 tRNA synthetase B5 domain AOC04_RS11670 SM00896 Ferredoxin-fold anticodon binding domain AOC04_RS11695 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOC04_RS11705 SM00357 Cold shock protein domain AOC04_RS11740 SM00354 helix_turn _helix lactose operon repressor AOC04_RS11750 SM00382 ATPases associated with a variety of cellular activities AOC04_RS11760 SM00870 AOC04_RS11760 AOC04_RS11775 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS11775 SM00866 AOC04_RS11775 AOC04_RS11800 SM00855 Phosphoglycerate mutase family AOC04_RS11805 SM00344 helix_turn_helix ASNC type AOC04_RS11815 SM00861 Transketolase, pyrimidine binding domain AOC04_RS11845 SM00382 ATPases associated with a variety of cellular activities AOC04_RS11850 SM00382 ATPases associated with a variety of cellular activities AOC04_RS11880 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS11895 SM00382 ATPases associated with a variety of cellular activities AOC04_RS11910 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS11955 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS11975 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AOC04_RS12090 SM00091 PAS domain AOC04_RS12090 SM00138 Methyltransferase, chemotaxis proteins AOC04_RS12090 SM00387 Histidine kinase-like ATPases AOC04_RS12090 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS12090 SM00448 cheY-homologous receiver domain AOC04_RS12125 SM01236 AOC04_RS12125 AOC04_RS12180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOC04_RS12180 SM00091 PAS domain AOC04_RS12180 SM00387 Histidine kinase-like ATPases AOC04_RS12180 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS12180 SM00448 cheY-homologous receiver domain AOC04_RS12285 SM00248 ankyrin repeats AOC04_RS12335 SM00463 Small MutS-related domain AOC04_RS12360 SM00347 helix_turn_helix multiple antibiotic resistance protein AOC04_RS12475 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOC04_RS12475 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOC04_RS12475 SM00493 AOC04_RS12475 AOC04_RS12485 SM00822 AOC04_RS12485 AOC04_RS12500 SM00028 Tetratricopeptide repeats AOC04_RS12540 SM00382 ATPases associated with a variety of cellular activities AOC04_RS12560 SM00260 Two component signalling adaptor domain AOC04_RS12565 SM00260 Two component signalling adaptor domain AOC04_RS12585 SM00448 cheY-homologous receiver domain AOC04_RS12590 SM00073 Histidine Phosphotransfer domain AOC04_RS12590 SM00260 Two component signalling adaptor domain AOC04_RS12590 SM00387 Histidine kinase-like ATPases AOC04_RS12590 SM01231 AOC04_RS12590 AOC04_RS12600 SM00448 cheY-homologous receiver domain AOC04_RS12615 SM00382 ATPases associated with a variety of cellular activities AOC04_RS12615 SM00962 SRP54-type protein, GTPase domain AOC04_RS12685 SM00331 Sigma factor PP2C-like phosphatases AOC04_RS12685 SM00448 cheY-homologous receiver domain AOC04_RS12700 SM00382 ATPases associated with a variety of cellular activities AOC04_RS12725 SM00382 ATPases associated with a variety of cellular activities AOC04_RS12725 SM00448 cheY-homologous receiver domain AOC04_RS12730 SM00091 PAS domain AOC04_RS12730 SM00387 Histidine kinase-like ATPases AOC04_RS12730 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS12735 SM00382 ATPases associated with a variety of cellular activities AOC04_RS12780 SM00047 Lysozyme subfamily 2 AOC04_RS12805 SM00091 PAS domain AOC04_RS12805 SM00382 ATPases associated with a variety of cellular activities AOC04_RS12840 SM00363 S4 RNA-binding domain AOC04_RS12865 SM00481 DNA polymerase alpha chain like domain AOC04_RS12880 SM00448 cheY-homologous receiver domain AOC04_RS12880 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS12890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS12890 SM00387 Histidine kinase-like ATPases AOC04_RS12890 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS12905 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS12925 SM00347 helix_turn_helix multiple antibiotic resistance protein AOC04_RS12930 SM00341 Helicase and RNase D C-terminal AOC04_RS12930 SM00487 DEAD-like helicases superfamily AOC04_RS12930 SM00490 helicase superfamily c-terminal domain AOC04_RS12930 SM00956 AOC04_RS12930 AOC04_RS12945 SM01144 AOC04_RS12945 AOC04_RS12995 SM00316 Ribosomal protein S1-like RNA-binding domain AOC04_RS13015 SM00487 DEAD-like helicases superfamily AOC04_RS13015 SM00490 helicase superfamily c-terminal domain AOC04_RS13025 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS13065 SM00382 ATPases associated with a variety of cellular activities AOC04_RS13100 SM00382 ATPases associated with a variety of cellular activities AOC04_RS13100 SM00487 DEAD-like helicases superfamily AOC04_RS13100 SM00490 helicase superfamily c-terminal domain AOC04_RS13100 SM00847 Helicase associated domain (HA2) Add an annotation AOC04_RS13145 SM00382 ATPases associated with a variety of cellular activities AOC04_RS13155 SM00797 Allophanate hydrolase subunit 2 AOC04_RS13160 SM00796 Allophanate hydrolase subunit 1 AOC04_RS13195 SM00507 HNH nucleases AOC04_RS13230 SM00855 Phosphoglycerate mutase family AOC04_RS13245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS13245 SM00387 Histidine kinase-like ATPases AOC04_RS13245 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS13245 SM00448 cheY-homologous receiver domain AOC04_RS13255 SM00825 Beta-ketoacyl synthase AOC04_RS13280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS13280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS13285 SM00387 Histidine kinase-like ATPases AOC04_RS13290 SM00448 cheY-homologous receiver domain AOC04_RS13290 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS13345 SM00382 ATPases associated with a variety of cellular activities AOC04_RS13380 SM01350 AOC04_RS13380 AOC04_RS13405 SM00831 Cation transporter/ATPase, N-terminus AOC04_RS13425 SM00382 ATPases associated with a variety of cellular activities AOC04_RS13525 SM00422 helix_turn_helix, mercury resistance AOC04_RS13555 SM00878 Biotin carboxylase C-terminal domain AOC04_RS13560 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS13570 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOC04_RS13575 SM00344 helix_turn_helix ASNC type AOC04_RS13580 SM00631 AOC04_RS13580 AOC04_RS13645 SM00479 AOC04_RS13645 AOC04_RS13660 SM00849 Metallo-beta-lactamase superfamily AOC04_RS13665 SM00257 Lysin motif AOC04_RS13690 SM00382 ATPases associated with a variety of cellular activities AOC04_RS13715 SM00411 bacterial (prokaryotic) histone like domain AOC04_RS13720 SM00382 ATPases associated with a variety of cellular activities AOC04_RS13720 SM00464 Found in ATP-dependent protease La (LON) AOC04_RS13725 SM00382 ATPases associated with a variety of cellular activities AOC04_RS13725 SM00994 ClpX C4-type zinc finger AOC04_RS13725 SM01086 C-terminal, D2-small domain, of ClpB protein AOC04_RS13765 SM00840 AOC04_RS13765 AOC04_RS13800 SM00347 helix_turn_helix multiple antibiotic resistance protein AOC04_RS13925 SM00382 ATPases associated with a variety of cellular activities AOC04_RS13930 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOC04_RS13950 SM00834 Putative regulatory protein AOC04_RS13955 SM00357 Cold shock protein domain AOC04_RS13990 SM00091 PAS domain AOC04_RS13990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS13990 SM00387 Histidine kinase-like ATPases AOC04_RS13990 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS14010 SM00981 AOC04_RS14010 AOC04_RS14105 SM00965 Secretin and TonB N terminus short domain AOC04_RS14140 SM01217 AOC04_RS14140 AOC04_RS14185 SM00138 Methyltransferase, chemotaxis proteins AOC04_RS14190 SM00260 Two component signalling adaptor domain AOC04_RS14190 SM00448 cheY-homologous receiver domain AOC04_RS14195 SM00858 AOC04_RS14195 AOC04_RS14220 SM01230 AOC04_RS14220 AOC04_RS14225 SM00354 helix_turn _helix lactose operon repressor AOC04_RS14280 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS14280 SM00895 AOC04_RS14280 AOC04_RS14295 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOC04_RS14395 SM00072 Guanylate kinase homologues. AOC04_RS14405 SM00116 Domain in cystathionine beta-synthase and other proteins. AOC04_RS14405 SM00924 MgtE intracellular N domain AOC04_RS14440 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOC04_RS14490 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS14495 SM00382 ATPases associated with a variety of cellular activities AOC04_RS14515 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS14555 SM00267 diguanylate cyclase AOC04_RS14580 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOC04_RS14580 SM00387 Histidine kinase-like ATPases AOC04_RS14580 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS14595 SM00871 Bacterial transcription activator, effector binding domain AOC04_RS14615 SM00354 helix_turn _helix lactose operon repressor AOC04_RS14625 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOC04_RS14625 SM00091 PAS domain AOC04_RS14625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS14720 SM00382 ATPases associated with a variety of cellular activities AOC04_RS14740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS14740 SM00387 Histidine kinase-like ATPases AOC04_RS14740 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS14745 SM00448 cheY-homologous receiver domain AOC04_RS14745 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS14760 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOC04_RS14765 SM00851 MGS-like domain AOC04_RS14780 SM00965 Secretin and TonB N terminus short domain AOC04_RS14825 SM00091 PAS domain AOC04_RS14825 SM00382 ATPases associated with a variety of cellular activities AOC04_RS14850 SM00357 Cold shock protein domain AOC04_RS14860 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOC04_RS14905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS14905 SM00387 Histidine kinase-like ATPases AOC04_RS14905 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS14910 SM00448 cheY-homologous receiver domain AOC04_RS14910 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS14935 SM00986 Uracil DNA glycosylase superfamily AOC04_RS14935 SM00987 UreE urease accessory protein, C-terminal domain AOC04_RS14950 SM00363 S4 RNA-binding domain AOC04_RS14975 SM00867 YceI-like domain AOC04_RS14985 SM00563 Phosphate acyltransferases AOC04_RS14995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOC04_RS15015 SM00257 Lysin motif AOC04_RS15065 SM01192 AOC04_RS15065 AOC04_RS15065 SM01193 AOC04_RS15065 AOC04_RS15080 SM00977 TilS substrate C-terminal domain AOC04_RS15090 SM00481 DNA polymerase alpha chain like domain AOC04_RS15120 SM00935 Outer membrane protein (OmpH-like) AOC04_RS15130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOC04_RS15175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOC04_RS15235 SM00357 Cold shock protein domain AOC04_RS15240 SM00563 Phosphate acyltransferases AOC04_RS15320 SM01154 AOC04_RS15320 AOC04_RS15340 SM00937 AOC04_RS15340 AOC04_RS15345 SM00267 diguanylate cyclase AOC04_RS15345 SM00448 cheY-homologous receiver domain AOC04_RS15350 SM00448 cheY-homologous receiver domain AOC04_RS15355 SM00073 Histidine Phosphotransfer domain AOC04_RS15355 SM00260 Two component signalling adaptor domain AOC04_RS15355 SM00387 Histidine kinase-like ATPases AOC04_RS15355 SM00448 cheY-homologous receiver domain AOC04_RS15360 SM00260 Two component signalling adaptor domain AOC04_RS15365 SM00138 Methyltransferase, chemotaxis proteins AOC04_RS15370 SM00260 Two component signalling adaptor domain AOC04_RS15375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS15375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS15395 SM01322 AOC04_RS15395 AOC04_RS15410 SM00448 cheY-homologous receiver domain AOC04_RS15465 SM00382 ATPases associated with a variety of cellular activities AOC04_RS15465 SM00962 SRP54-type protein, GTPase domain AOC04_RS15465 SM00963 SRP54-type protein, helical bundle domain AOC04_RS15475 SM01091 Transporter associated domain AOC04_RS15520 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS15520 SM00866 AOC04_RS15520 AOC04_RS15550 SM01211 AOC04_RS15550 AOC04_RS15555 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS15575 SM00358 Double-stranded RNA binding motif AOC04_RS15575 SM00535 Ribonuclease III family AOC04_RS15625 SM00411 bacterial (prokaryotic) histone like domain AOC04_RS15670 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS15685 SM00487 DEAD-like helicases superfamily AOC04_RS15685 SM00490 helicase superfamily c-terminal domain AOC04_RS15725 SM00670 Large family of predicted nucleotide-binding domains AOC04_RS15740 SM00984 UDP binding domain AOC04_RS15755 SM00671 Sel1-like repeats. AOC04_RS15765 SM00710 Parallel beta-helix repeats AOC04_RS15765 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AOC04_RS15860 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS15865 SM00965 Secretin and TonB N terminus short domain AOC04_RS15900 SM00422 helix_turn_helix, mercury resistance AOC04_RS15905 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOC04_RS15925 SM00346 helix_turn_helix isocitrate lyase regulation AOC04_RS15950 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOC04_RS15960 SM00422 helix_turn_helix, mercury resistance AOC04_RS15980 SM00905 Dihydroneopterin aldolase AOC04_RS16025 SM00563 Phosphate acyltransferases AOC04_RS16045 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOC04_RS16095 SM00382 ATPases associated with a variety of cellular activities AOC04_RS16100 SM00116 Domain in cystathionine beta-synthase and other proteins. AOC04_RS16120 SM00382 ATPases associated with a variety of cellular activities AOC04_RS16200 SM00316 Ribosomal protein S1-like RNA-binding domain AOC04_RS16235 SM00845 GatB domain AOC04_RS16300 SM00422 helix_turn_helix, mercury resistance AOC04_RS16360 SM00937 AOC04_RS16360 AOC04_RS16370 SM00028 Tetratricopeptide repeats AOC04_RS16390 SM01400 AOC04_RS16390 AOC04_RS16430 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS16430 SM00895 AOC04_RS16430 AOC04_RS16435 SM00387 Histidine kinase-like ATPases AOC04_RS16435 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS16435 SM00448 cheY-homologous receiver domain AOC04_RS16470 SM00421 helix_turn_helix, Lux Regulon AOC04_RS16470 SM00448 cheY-homologous receiver domain AOC04_RS16475 SM00421 helix_turn_helix, Lux Regulon AOC04_RS16475 SM00448 cheY-homologous receiver domain AOC04_RS16480 SM00052 Putative diguanylate phosphodiesterase AOC04_RS16480 SM00448 cheY-homologous receiver domain AOC04_RS16485 SM00387 Histidine kinase-like ATPases AOC04_RS16485 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS16485 SM00448 cheY-homologous receiver domain AOC04_RS16505 SM00947 Carbonic anhydrase AOC04_RS16655 SM00382 ATPases associated with a variety of cellular activities AOC04_RS16700 SM00091 PAS domain AOC04_RS16700 SM00387 Histidine kinase-like ATPases AOC04_RS16700 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS16705 SM00382 ATPases associated with a variety of cellular activities AOC04_RS16705 SM00448 cheY-homologous receiver domain AOC04_RS16755 SM00749 bacterial OsmY and nodulation domain AOC04_RS16760 SM00316 Ribosomal protein S1-like RNA-binding domain AOC04_RS16760 SM00322 K homology RNA-binding domain AOC04_RS16765 SM01387 AOC04_RS16765 AOC04_RS16785 SM00316 Ribosomal protein S1-like RNA-binding domain AOC04_RS16825 SM00382 ATPases associated with a variety of cellular activities AOC04_RS16835 SM01103 AOC04_RS16835 AOC04_RS16845 SM00851 MGS-like domain AOC04_RS16845 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AOC04_RS16850 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AOC04_RS16860 SM00271 DnaJ molecular chaperone homology domain AOC04_RS16910 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS16910 SM00895 AOC04_RS16910 AOC04_RS16950 SM00346 helix_turn_helix isocitrate lyase regulation AOC04_RS16975 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOC04_RS17005 SM00421 helix_turn_helix, Lux Regulon AOC04_RS17040 SM00448 cheY-homologous receiver domain AOC04_RS17040 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS17090 SM00858 AOC04_RS17090 AOC04_RS17100 SM01130 AOC04_RS17100 AOC04_RS17105 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS17105 SM00895 AOC04_RS17105 AOC04_RS17130 SM01230 AOC04_RS17130 AOC04_RS17135 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS17140 SM00344 helix_turn_helix ASNC type AOC04_RS17230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS17230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS17230 SM01358 AOC04_RS17230 AOC04_RS17310 SM00947 Carbonic anhydrase AOC04_RS17325 SM00267 diguanylate cyclase AOC04_RS17325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS17335 SM00382 ATPases associated with a variety of cellular activities AOC04_RS17435 SM00829 Enoylreductase AOC04_RS17455 SM00422 helix_turn_helix, mercury resistance AOC04_RS17470 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOC04_RS17475 SM00849 Metallo-beta-lactamase superfamily AOC04_RS17480 SM00090 RIO-like kinase AOC04_RS17485 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS17500 SM00822 AOC04_RS17500 AOC04_RS17535 SM00091 PAS domain AOC04_RS17535 SM00387 Histidine kinase-like ATPases AOC04_RS17535 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS17550 SM00421 helix_turn_helix, Lux Regulon AOC04_RS17550 SM00448 cheY-homologous receiver domain AOC04_RS17590 SM00858 AOC04_RS17590 AOC04_RS17600 SM00448 cheY-homologous receiver domain AOC04_RS17625 SM01359 AOC04_RS17625 AOC04_RS17625 SM01360 AOC04_RS17625 AOC04_RS17660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS17680 SM00878 Biotin carboxylase C-terminal domain AOC04_RS17705 SM00798 AICARFT/IMPCHase bienzyme AOC04_RS17705 SM00851 MGS-like domain AOC04_RS17710 SM01209 AOC04_RS17710 AOC04_RS17710 SM01210 AOC04_RS17710 AOC04_RS17715 SM00387 Histidine kinase-like ATPases AOC04_RS17715 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS17715 SM00448 cheY-homologous receiver domain AOC04_RS17790 SM00382 ATPases associated with a variety of cellular activities AOC04_RS17825 SM00382 ATPases associated with a variety of cellular activities AOC04_RS17860 SM00387 Histidine kinase-like ATPases AOC04_RS17860 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS17870 SM00271 DnaJ molecular chaperone homology domain AOC04_RS17890 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS17920 SM00988 UreE urease accessory protein, N-terminal domain AOC04_RS17945 SM00822 AOC04_RS17945 AOC04_RS17950 SM00382 ATPases associated with a variety of cellular activities AOC04_RS17955 SM00382 ATPases associated with a variety of cellular activities AOC04_RS18000 SM01150 AOC04_RS18000 AOC04_RS18015 SM00729 Elongator protein 3, MiaB family, Radical SAM AOC04_RS18020 SM00382 ATPases associated with a variety of cellular activities AOC04_RS18045 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOC04_RS18050 SM00316 Ribosomal protein S1-like RNA-binding domain AOC04_RS18050 SM00357 Cold shock protein domain AOC04_RS18050 SM00955 AOC04_RS18050 AOC04_RS18075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS18075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS18080 SM00788 Adenylosuccinate synthetase AOC04_RS18090 SM00244 prohibitin homologues AOC04_RS18095 SM00244 prohibitin homologues AOC04_RS18115 SM00853 MutL C terminal dimerisation domain AOC04_RS18115 SM01340 AOC04_RS18115 AOC04_RS18120 SM00257 Lysin motif AOC04_RS18120 SM00646 AOC04_RS18120 AOC04_RS18145 SM00479 AOC04_RS18145 AOC04_RS18170 SM00450 Rhodanese Homology Domain AOC04_RS18195 SM00434 DNA Topoisomerase IV AOC04_RS18210 SM00387 Histidine kinase-like ATPases AOC04_RS18210 SM00433 TopoisomeraseII AOC04_RS18285 SM00382 ATPases associated with a variety of cellular activities AOC04_RS18395 SM00052 Putative diguanylate phosphodiesterase AOC04_RS18395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOC04_RS18395 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOC04_RS18395 SM00091 PAS domain AOC04_RS18395 SM00267 diguanylate cyclase AOC04_RS18425 SM01091 Transporter associated domain AOC04_RS18455 SM00563 Phosphate acyltransferases AOC04_RS18530 SM00825 Beta-ketoacyl synthase AOC04_RS18540 SM00822 AOC04_RS18540 AOC04_RS18545 SM00825 Beta-ketoacyl synthase AOC04_RS18660 SM00965 Secretin and TonB N terminus short domain AOC04_RS18680 SM00842 Cell division protein FtsA AOC04_RS18695 SM00919 Malic enzyme, NAD binding domain AOC04_RS18695 SM01274 AOC04_RS18695 AOC04_RS18700 SM00318 Staphylococcal nuclease homologues AOC04_RS18710 SM00487 DEAD-like helicases superfamily AOC04_RS18710 SM00490 helicase superfamily c-terminal domain AOC04_RS18715 SM00836 DALR anticodon binding domain AOC04_RS18715 SM01016 Arginyl tRNA synthetase N terminal dom AOC04_RS18730 SM00382 ATPases associated with a variety of cellular activities AOC04_RS18730 SM01086 C-terminal, D2-small domain, of ClpB protein AOC04_RS18795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS18795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS18795 SM01358 AOC04_RS18795 AOC04_RS18800 SM00382 ATPases associated with a variety of cellular activities AOC04_RS18810 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS18810 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOC04_RS18870 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS18870 SM00866 AOC04_RS18870 AOC04_RS18880 SM00487 DEAD-like helicases superfamily AOC04_RS18880 SM00490 helicase superfamily c-terminal domain AOC04_RS18905 SM00363 S4 RNA-binding domain AOC04_RS18920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS18920 SM00387 Histidine kinase-like ATPases AOC04_RS18920 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS18925 SM00448 cheY-homologous receiver domain AOC04_RS18925 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS18930 SM00316 Ribosomal protein S1-like RNA-binding domain AOC04_RS18930 SM00732 Likely ribonuclease with RNase H fold. AOC04_RS18955 SM01118 AOC04_RS18955 AOC04_RS18990 SM00981 AOC04_RS18990 AOC04_RS18995 SM01230 AOC04_RS18995 AOC04_RS19005 SM00091 PAS domain AOC04_RS19005 SM00387 Histidine kinase-like ATPases AOC04_RS19005 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS19010 SM00382 ATPases associated with a variety of cellular activities AOC04_RS19010 SM00448 cheY-homologous receiver domain AOC04_RS19035 SM00450 Rhodanese Homology Domain AOC04_RS19050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOC04_RS19050 SM00245 tail specific protease AOC04_RS19100 SM00478 endonuclease III AOC04_RS19130 SM00226 Low molecular weight phosphatase family AOC04_RS19140 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOC04_RS19155 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOC04_RS19155 SM00387 Histidine kinase-like ATPases AOC04_RS19155 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS19170 SM00346 helix_turn_helix isocitrate lyase regulation AOC04_RS19180 SM00382 ATPases associated with a variety of cellular activities AOC04_RS19185 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS19205 SM00095 Transthyretin AOC04_RS19215 SM00448 cheY-homologous receiver domain AOC04_RS19215 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS19220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS19220 SM00387 Histidine kinase-like ATPases AOC04_RS19220 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS19290 SM00387 Histidine kinase-like ATPases AOC04_RS19290 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS19295 SM00382 ATPases associated with a variety of cellular activities AOC04_RS19295 SM00448 cheY-homologous receiver domain AOC04_RS19320 SM00257 Lysin motif AOC04_RS19350 SM00344 helix_turn_helix ASNC type AOC04_RS19360 SM00382 ATPases associated with a variety of cellular activities AOC04_RS19365 SM00244 prohibitin homologues AOC04_RS19415 SM01011 Aminopeptidase P, N-terminal domain AOC04_RS19455 SM00382 ATPases associated with a variety of cellular activities AOC04_RS19510 SM00357 Cold shock protein domain AOC04_RS19510 SM00382 ATPases associated with a variety of cellular activities AOC04_RS19510 SM00959 Rho termination factor, N-terminal domain AOC04_RS19520 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS19535 SM00382 ATPases associated with a variety of cellular activities AOC04_RS19585 SM00382 ATPases associated with a variety of cellular activities AOC04_RS19635 SM00448 cheY-homologous receiver domain AOC04_RS19635 SM00850 LytTr DNA-binding domain AOC04_RS19655 SM00052 Putative diguanylate phosphodiesterase AOC04_RS19655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOC04_RS19655 SM00091 PAS domain AOC04_RS19655 SM00267 diguanylate cyclase AOC04_RS19725 SM00347 helix_turn_helix multiple antibiotic resistance protein AOC04_RS19740 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS19740 SM00895 AOC04_RS19740 AOC04_RS19745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS19745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS19810 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOC04_RS19810 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOC04_RS19885 SM00448 cheY-homologous receiver domain AOC04_RS19895 SM00382 ATPases associated with a variety of cellular activities AOC04_RS19945 SM01001 AIR carboxylase AOC04_RS19965 SM00870 AOC04_RS19965 AOC04_RS19980 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS19990 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS20015 SM00878 Biotin carboxylase C-terminal domain AOC04_RS20030 SM00052 Putative diguanylate phosphodiesterase AOC04_RS20030 SM00091 PAS domain AOC04_RS20030 SM00267 diguanylate cyclase AOC04_RS20040 SM00978 AOC04_RS20040 AOC04_RS20080 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOC04_RS20100 SM00155 Phospholipase D. Active site motifs. AOC04_RS20115 SM00244 prohibitin homologues AOC04_RS20120 SM00244 prohibitin homologues AOC04_RS20145 SM00420 helix_turn_helix, Deoxyribose operon repressor AOC04_RS20145 SM01134 AOC04_RS20145 AOC04_RS20160 SM00382 ATPases associated with a variety of cellular activities AOC04_RS20200 SM00470 ParB-like nuclease domain AOC04_RS20215 SM01228 AOC04_RS20215 AOC04_RS20220 SM00382 ATPases associated with a variety of cellular activities AOC04_RS20235 SM01234 AOC04_RS20235 AOC04_RS20250 SM00382 ATPases associated with a variety of cellular activities AOC04_RS20250 SM00760 Bacterial dnaA protein helix-turn-helix domain AOC04_RS20255 SM00480 DNA polymerase III beta subunit AOC04_RS20265 SM00387 Histidine kinase-like ATPases AOC04_RS20265 SM00433 TopoisomeraseII AOC04_RS20280 SM00563 Phosphate acyltransferases AOC04_RS20310 SM00028 Tetratricopeptide repeats AOC04_RS20385 SM00822 AOC04_RS20385 AOC04_RS20420 SM00382 ATPases associated with a variety of cellular activities AOC04_RS20455 SM00382 ATPases associated with a variety of cellular activities AOC04_RS20495 SM01219 AOC04_RS20495 AOC04_RS20535 SM00938 Nitrogen regulatory protein P-II AOC04_RS20550 SM00382 ATPases associated with a variety of cellular activities AOC04_RS20565 SM00052 Putative diguanylate phosphodiesterase AOC04_RS20565 SM00267 diguanylate cyclase AOC04_RS20590 SM00530 Helix-turn-helix XRE-family like proteins AOC04_RS20595 SM01005 Alanine racemase, C-terminal domain AOC04_RS20610 SM00344 helix_turn_helix ASNC type AOC04_RS20630 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOC04_RS20635 SM00155 Phospholipase D. Active site motifs. AOC04_RS20720 SM00072 Guanylate kinase homologues. AOC04_RS20725 SM01409 AOC04_RS20725 AOC04_RS20730 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOC04_RS20730 SM00954 Region found in RelA / SpoT proteins AOC04_RS20770 SM00487 DEAD-like helicases superfamily AOC04_RS20770 SM00490 helicase superfamily c-terminal domain AOC04_RS20785 SM00411 bacterial (prokaryotic) histone like domain AOC04_RS20830 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AOC04_RS20840 SM00947 Carbonic anhydrase AOC04_RS20905 SM00382 ATPases associated with a variety of cellular activities AOC04_RS20905 SM00930 AOC04_RS20905 AOC04_RS20910 SM01060 AOC04_RS20910 AOC04_RS20925 SM00382 ATPases associated with a variety of cellular activities AOC04_RS20950 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOC04_RS20950 SM00474 3'-5' exonuclease AOC04_RS20950 SM00475 5'-3' exonuclease AOC04_RS20950 SM00482 DNA polymerase A domain AOC04_RS20980 SM00267 diguanylate cyclase AOC04_RS20985 SM00644 AOC04_RS20985 AOC04_RS20990 SM00091 PAS domain AOC04_RS20990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOC04_RS20990 SM00387 Histidine kinase-like ATPases AOC04_RS20990 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS20995 SM00382 ATPases associated with a variety of cellular activities AOC04_RS20995 SM00448 cheY-homologous receiver domain AOC04_RS21030 SM00382 ATPases associated with a variety of cellular activities AOC04_RS21065 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS21165 SM00116 Domain in cystathionine beta-synthase and other proteins. AOC04_RS21165 SM01091 Transporter associated domain AOC04_RS21170 SM00091 PAS domain AOC04_RS21170 SM00387 Histidine kinase-like ATPases AOC04_RS21170 SM00388 His Kinase A (phosphoacceptor) domain AOC04_RS21175 SM00448 cheY-homologous receiver domain AOC04_RS21175 SM00862 Transcriptional regulatory protein, C terminal AOC04_RS21195 SM00382 ATPases associated with a variety of cellular activities AOC04_RS21215 SM01230 AOC04_RS21215 AOC04_RS21225 SM01230 AOC04_RS21225 AOC04_RS21245 SM00382 ATPases associated with a variety of cellular activities AOC04_RS21250 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS21270 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS21285 SM00382 ATPases associated with a variety of cellular activities AOC04_RS21295 SM01321 AOC04_RS21295 AOC04_RS21310 SM00382 ATPases associated with a variety of cellular activities AOC04_RS21310 SM00930 AOC04_RS21310 AOC04_RS21375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOC04_RS21395 SM00422 helix_turn_helix, mercury resistance AOC04_RS21410 SM00382 ATPases associated with a variety of cellular activities AOC04_RS21480 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AOC04_RS21480 SM01232 AOC04_RS21480 AOC04_RS21515 SM00450 Rhodanese Homology Domain AOC04_RS21520 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS21545 SM00382 ATPases associated with a variety of cellular activities AOC04_RS21545 SM00962 SRP54-type protein, GTPase domain AOC04_RS21545 SM00963 SRP54-type protein, helical bundle domain AOC04_RS21550 SM00382 ATPases associated with a variety of cellular activities AOC04_RS21595 SM00729 Elongator protein 3, MiaB family, Radical SAM AOC04_RS21620 SM01152 AOC04_RS21620 AOC04_RS21640 SM00382 ATPases associated with a variety of cellular activities AOC04_RS21670 SM00732 Likely ribonuclease with RNase H fold. AOC04_RS21690 SM00448 cheY-homologous receiver domain AOC04_RS21695 SM00448 cheY-homologous receiver domain AOC04_RS21700 SM00260 Two component signalling adaptor domain AOC04_RS21705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOC04_RS21715 SM00260 Two component signalling adaptor domain AOC04_RS21735 SM00996 S-adenosyl-L-homocysteine hydrolase AOC04_RS21735 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AOC04_RS21745 SM00487 DEAD-like helicases superfamily AOC04_RS21745 SM00490 helicase superfamily c-terminal domain AOC04_RS21750 SM00867 YceI-like domain AOC04_RS21770 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS21785 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS21805 SM00564 beta-propeller repeat AOC04_RS21830 SM00925 MltA specific insert domain AOC04_RS21845 SM00532 Ligase N family AOC04_RS21855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOC04_RS21860 SM00861 Transketolase, pyrimidine binding domain AOC04_RS21865 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOC04_RS21920 SM00487 DEAD-like helicases superfamily AOC04_RS21920 SM00490 helicase superfamily c-terminal domain AOC04_RS21960 SM00382 ATPases associated with a variety of cellular activities AOC04_RS21980 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS22010 SM00342 helix_turn_helix, arabinose operon control protein AOC04_RS22030 SM00989 AOC04_RS22030 AOC04_RS22045 SM00893 Electron transfer flavoprotein domain AOC04_RS22050 SM00893 Electron transfer flavoprotein domain AOC04_RS22125 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AOC04_RS22150 SM00965 Secretin and TonB N terminus short domain AOC04_RS22165 SM00479 AOC04_RS22165 AOC04_RS22170 SM00100 Cyclic nucleotide-monophosphate binding domain AOC04_RS22170 SM00116 Domain in cystathionine beta-synthase and other proteins. AOC04_RS22175 SM00448 cheY-homologous receiver domain AOC04_RS22215 SM00729 Elongator protein 3, MiaB family, Radical SAM AOC04_RS22215 SM00876 Biotin and Thiamin Synthesis associated domain AOC04_RS22265 SM00729 Elongator protein 3, MiaB family, Radical SAM AOC04_RS22300 SM00344 helix_turn_helix ASNC type AOC04_RS22325 SM00400 zinc finger AOC04_RS22325 SM00493 AOC04_RS22325 AOC04_RS22325 SM00766 DNA primase DnaG DnaB-binding AOC04_RS22340 SM01207 AOC04_RS22340 AOC04_RS22345 SM00905 Dihydroneopterin aldolase AOC04_RS22370 SM00763 PrkA AAA domain AOC04_RS22375 SM00450 Rhodanese Homology Domain AOC04_RS22390 SM00650 Ribosomal RNA adenine dimethylases AOC04_RS22420 SM00271 DnaJ molecular chaperone homology domain AOC04_RS22430 SM00062 Bacterial periplasmic substrate-binding proteins AOC04_RS22430 SM00091 PAS domain AOC04_RS22430 SM00387 Histidine kinase-like ATPases AOC04_RS22435 SM00421 helix_turn_helix, Lux Regulon AOC04_RS22435 SM00448 cheY-homologous receiver domain AOC04_RS22440 SM00382 ATPases associated with a variety of cellular activities AOC04_RS22460 SM01321 AOC04_RS22460 AOC04_RS22500 SM00100 Cyclic nucleotide-monophosphate binding domain AOC04_RS22500 SM00419 helix_turn_helix, cAMP Regulatory protein AOC04_RS22520 SM00822 AOC04_RS22520 AOC04_RS22540 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOC04_RS22620 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AOC04_RS22620 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AOC04_RS22625 SM00649 Ribosomal protein L11/L12 AOC04_RS22650 SM00663 RNA polymerase I subunit A N-terminus AOC04_RS22665 SM00838 Elongation factor G C-terminus AOC04_RS22665 SM00889 Elongation factor G, domain IV AOC04_RS22675 SM01403 AOC04_RS22675 AOC04_RS22695 SM01382 AOC04_RS22695 AOC04_RS22695 SM01383 AOC04_RS22695 AOC04_RS22710 SM00322 K homology RNA-binding domain AOC04_RS22730 SM01374 AOC04_RS22730 AOC04_RS22735 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AOC04_RS22800 SM00363 S4 RNA-binding domain AOC04_RS22800 SM01390 AOC04_RS22800 AOC04_RS22805 SM00662 RNA polymerases D AOC04_RS22815 SM01060 AOC04_RS22815 AOC04_RS22870 SM00382 ATPases associated with a variety of cellular activities AOC04_RS22955 SM00861 Transketolase, pyrimidine binding domain AOC04_RS22970 SM00421 helix_turn_helix, Lux Regulon AOC04_RS22980 SM00861 Transketolase, pyrimidine binding domain AOC04_RS22995 SM00822 AOC04_RS22995 AOC04_RS23015 SM00422 helix_turn_helix, mercury resistance AOC04_RS23075 SM00382 ATPases associated with a variety of cellular activities AOC04_RS23100 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. AOC04_RS23115 SM00464 Found in ATP-dependent protease La (LON) AOC04_RS23120 SM00014 Acid phosphatase homologues AOC04_RS23170 SM00936 Penicillin-binding protein 5, C-terminal domain AOC04_RS23185 SM00729 Elongator protein 3, MiaB family, Radical SAM