        recF NONE
        gyrB    6241 ..    6256 + -11.8  -5.13741   ATGCAACATCATCAA              GCCCGC TCAC GCGGGC               TTTTTGTTGCGTTGG 100 59
LOY45_RS00040 NONE
LOY45_RS00045 NONE
LOY45_RS00050   13645 ..   13665 +  -9.7  -3.14931   CAACACGGCGATGCC            CAGGCCG GCGCGAG CGGCCTG            TTGCTGGGCGATCAC  60 225
LOY45_RS00060 NONE
LOY45_RS00065   17868 ..   17883 + -11.8  -5.60993   TGCAGGCACAAAAAA              CCGGCG TAAG CGCCGG               TTTTTTTATGCCGCG 100 46
LOY45_RS00090 NONE
LOY45_RS00095   24171 ..   24193 +  -7.6  -3.05384   CCAGGTCTCCCTGTA           GCTGATGCGC CTT GCCCAGCAGC           TTCCATGCCGCCGAA  55 248
        dprA NONE
LOY45_RS00130   30510 ..   30552 + -18.5  -2.52464   CGGCTGAGGGCCTCA TCGCTGG-CAAGCCAGCTCC AGTA GGAGCGGGCTTGCCCCGCGA TCAATTCACCCCCGC  91 34
        hemF NONE
        aroE   33545 ..   33556 +  -7.2  -3.32963   TTCCTCGATCACTTG                CGGG CGCG CCCG                 TTGTAGCGTCAGGCT  55 88
LOY45_RS00160   36133 ..   36149 +  -3.8  -3.63968   TTGAATCTTTCGATC              TTTCAA CAGCC TTGAAA              TTTCGAGCTTTACCA  52 11
LOY45_RS00175   39480 ..   39497 +  -6.3  -4.08945   CATTCTCGGCGTTGC             CCTTGAG CGTC TTCAAGG              TTTTGCGCGACTCAT  66 216
LOY45_RS00185   40027 ..   40048 + -12.9  -2.78746   CGTTACACAGTCTGA           GGCGCCCGG CCCT CCTGGCGCC            CTTCTCTACTTTGAT  74 72
LOY45_RS00190   40571 ..   40598 +  -4.8  -2.87132   CCCACCGCTTCACGC        TCATGAGGCAGCC ACA GGCCGTC-CATGG        TCTCTACCGGCGGAC  45 288
LOY45_RS00200   42004 ..   42020 +  -2.2  -3.41602   TGCTGAGTTAAGGCA              GAACCG GGACG CGCTTC              TTGTGGTCAAATGAG  46 30
LOY45_RS00205   42780 ..   42806 +  -3.5   -3.5394   CCATTCACGCCTTTA         GGTACGCTGGC ACCCC GCCGGCTGGCC         TTTGCCGACCACTTT  50 499
LOY45_RS00220   44737 ..   44752 + -10.4   -3.5936   ATGTACAGGGTGCGG              CCCTGC CCTT GCAGGG               TTTCGAGCATTTCAC  71 380
        prlC NONE
LOY45_RS00240   48091 ..   48124 + -10.3  -4.88228   GGAATCGAACGCAAG     CCCCGTGTACTGTAT ATAA AAACAGTATTCGGGG      TTTTTCATGTTCAAT 100 83
LOY45_RS00245   49196 ..   49220 +  -2.9   -5.6473   TCACTGCTCTGATTT          CAATAATGG GTATTGG CCATTAATG          TTTTTTTGATATTAT  88 29
LOY45_RS00250   50182 ..   50225 + -11.7  -2.58812   ACACCCCCGCGAATA GCTGATTGAC-GGCCGCACC CGCCT GGTGCGGCCTGGTCATCGGC TGCCTTGAATTTCCC  67 50
LOY45_RS00255   52110 ..   52126 + -10.1  -2.72991   ACTGTTCGACTGACT              CCAGGGC AAA GCTCTGG              TCATTGAGCATCTCA  59 256
        coxB NONE
        ctaD NONE
LOY45_RS00275 NONE
LOY45_RS00280   57541 ..   57554 +  -3.7  -3.53224   ACTGACCTTTCGAGG               GCCCG GTGA CGCGC                TTTCGCCCCGGCATC  50 294
LOY45_RS00290 NONE
LOY45_RS00295 NONE
LOY45_RS00300 NONE
        cyoE NONE
LOY45_RS00310   61471 ..   61511 + -11.2  -2.52543   ATCGCTGGCAAGCCA GCTCCCACAAGGTCCGGCT TTGC ACCTGAACCT-GTGGGAGC  TGGCTTGCCAGCGAT  67 46
        katE   66437 ..   66456 +   -15  -5.06414   CTTGAGGCAGGAACC            GGGTGCCC GCCT GGGCACCC             TTTTTGTTACGGGCG 100 36
LOY45_RS00355   70356 ..   70410 + -34.5  -3.53012   AAGTTGTGACGCCCT GATCGCGGGGCAAGCCCGCTCCGAC CTATT GTAGGAGCGGGCTTGCCCCGCGATG TTTCACAACGCAAAC 100 32
        polA   74806 ..   74824 +  -4.4  -5.75342   CCCGAACTTCCCCCT             CCCCATAC GAA GTCCGGGG             TTTTTTTTGCCCGGC 100 279
LOY45_RS00380 NONE
LOY45_RS00385   76681 ..   76698 + -10.5  -5.24531   GCGCAAAGATGAAAA             GGGTGGC TTCG GCCGCCC              TTTTTTGTGCCCGCT 100 71
        dsbA NONE
LOY45_RS00395 NONE
LOY45_RS00400 NONE
LOY45_RS00405   81206 ..   81225 +  -5.6  -2.54896   AGCAGTCGTTAACCG            GCACCGCCC AAC GGGCAG-GC            TGACTTGGCTGGCAG  46 29
LOY45_RS00410   83086 ..   83099 +  -2.3  -3.69702   CCTGCTGGCCGTAGG               CGATG CCCT CACCG                TTGTCTTCGATGCTG  53 214
LOY45_RS00425   87167 ..   87182 +  -3.4  -3.10175   TGGATAACATATTGA              TTTTTA ACGA TAAAAA               ATTGTTTTAAAGGCT  43 108
LOY45_RS00430   87517 ..   87536 +  -5.6  -4.07568   TTGTTGATAACGCTG            CACCCCGT GATC GCTGGGTG             TTTTAAGCGAACACC  64 0
LOY45_RS00435 NONE
LOY45_RS00440   88453 ..   88464 +  -7.2  -3.06679   CCTTCAGGCAGAGGT                GCCC GACC GGGC                 TTCCGTAGCGCTCTT  57 253
        gltP   90325 ..   90343 +   -16  -5.45652   CCGGCTGCACGAAAA             GCCCCGAC CTG GTCGGGGC             TTTTTTGTTGACCCT 100 48
LOY45_RS00450   91726 ..   91758 +  -4.8  -3.40371   GTTCTTCGCCTGAAG     CTGACCGGCCTGGAC TACC GTCCA-GTCGACCAG      TTGCTTCATCAACTG  52 28
LOY45_RS00500  102650 ..  102675 +  -5.3  -4.11692   TTTGCAGCTGTTTTT         GCCGCTGGCTG GTTG CACTCAGCAGC          TTTTCGCGCTCGCTG  64 190
LOY45_RS00555  113579 ..  113593 +  -5.6  -2.82449   CCTTGGTCGCGCACA               GACCGG CAT CCAGTC               CTTCTATTAATAAGG  47 1
LOY45_RS00560  114874 ..  114886 +  -2.6  -4.41895   AGCTACAAGTTGAGC                GCGG TGCCT CTGC                TTTTACTTGCAGCTT  63 62
LOY45_RS00565  117000 ..  117016 +  -3.7  -3.32844   ATCACCTCCTTAATC              GACAG ACATCAG CTGTC              TTATGAGCTCCCACA  48 29
LOY45_RS00570 NONE
LOY45_RS00575  117257 ..  117297 + -10.7  -4.60889   CCACCTTACGTCAAA  GCTTAGAAATGAATATTCG GCT CGAATATTGATTTCTGAAC  TTTTTCAGAATCGTT  93 38
LOY45_RS00580  120479 ..  120492 +  -5.3  -4.15222   GTGTCTAACAAGACC               TTCTG GCAA CAGAA                TTTCTTGACGACCAT  64 155
         rrf  120620 ..  120655 + -19.2  -3.38046   GTCAAGATTAAATTC    CGAAACCCCTATCTGC GTAT GCAGGTAGGGGTTTTG     TCTTTAAGGTAGAAG 100 34
         rrf  120845 ..  120879 + -23.8   -3.5812   CGTCAAGATTCATTC     CGAAACCCCTGTCTGC CCT GCAGACAGGGGTTTTG     TCTTTCTGGTAACTG 100 33
LOY45_RS00645  135096 ..  135106 +  -8.2  -3.14132   GCCGAAGGCTTCCCC                 GCCG AGC CGGC                 TTACTGAAGGAGCAC  60 8
LOY45_RS00650  137184 ..  137194 +  -2.4  -3.59979   TGACGGGCATTGGAT                 CGGC TGA GCAG                 TTTGGCCTGAGCGCC  50 139
LOY45_RS00665  154619 ..  154632 +  -5.3  -2.52623   TGAACCTGCCAGGCA               TGAAC TGAG GTTCA                CTGTTATAGCCAACC  46 18
LOY45_RS00670 NONE
LOY45_RS00675  158208 ..  158234 + -10.2  -2.52543   ATCGCTGGCAAGCCA         GCTCCCACAG TTGGACT TTGTGGGAGC         TGGCTTGCCAGCGAT  64 45
LOY45_RS00680  159316 ..  159330 +    -7  -3.54029   TACCGCACCACCATC               CAGGGC GAT GCCCCG               TTCTGATTACTCGAG  58 5
LOY45_RS00685 NONE
LOY45_RS00690 NONE
LOY45_RS00695  162566 ..  162595 + -11.5  -3.59023   CCGCGCTGGATCAAC       GC-CAGCGGGTTGA GGG TCAGCTCGCTGAGC       TTGTCGTTATGTGCC  74 467
LOY45_RS00705  164221 ..  164234 +  -3.9  -3.25823   ATCGAAGAATATTGA               TAGTT AGCA AACTA                TTAATATAGCCACGA  48 81
LOY45_RS00710 NONE
LOY45_RS00715 NONE
LOY45_RS00720 NONE
LOY45_RS00725 NONE
LOY45_RS00730  169287 ..  169336 + -17.1  -3.44146   TGGTGAGAGCGGCAA GGCCAGCTCCCACAGGTGCTGTG TAAA CAGAGCCCTTGTGGGAGCCAGCC TTACTTATCCACAAG  95 35
LOY45_RS00745 NONE
LOY45_RS00750 NONE
LOY45_RS00755  173480 ..  173490 +  -3.2  -4.25283   TTTTGTCTTTAGAAG                 CTGT GCC ACGG                 TTTTCATAGAGGCCT  64 461
LOY45_RS00780  178704 ..  178733 +  -5.7  -3.01712   GGGGCAAGTCGTACC       GCCGCT-CCCAC AATGCCA GTGGTCAGCGGC       TATTCACCCACCCGC  51 85
        gabD  181303 ..  181337 + -12.1  -4.58395   GTAAGGCTTTACCTC    TGCCAGCGGGGCG-CG AGAG CGACGTCTCGCTGGCC     TTTTTACACCGTACA  95 48
        gabT  182767 ..  182780 +  -9.5  -5.75342   CGCATTAGAAGAAAA               CCCGC TTCG GCGGG                TTTTTTTTCGCCCAA 100 48
LOY45_RS00805  184135 ..  184173 +  -9.6  -2.52543   TCGCTGGCAAGGCCA  GCTCCCAC-AGGGTTTG CATGCC CTGGCCCTTGTGGGAGC   TGGCTTGCCAGCGAT  62 67
LOY45_RS00820  188555 ..  188589 +  -9.3  -2.57983   TGGGCCTGAGGGCCC    TATCGCGGGGC-GG-CG ATC CGACTTGCCCCGCGAAA    CTCTATTTCAGTTAT  59 32
        oscA NONE
LOY45_RS00830  190005 ..  190024 +   -15  -3.21912   CAGTAGCCAGCATGG            GCCCGGGA TTCG TCCCGGGC             TTCGTGCGTTCAACC  86 69
        cysT NONE
        cysW NONE
LOY45_RS00845  192755 ..  192765 +  -2.4  -3.53811   AATATCTGATCATGA                 GCCG GGG CTGC                 TTTGCAGCCCATCGC  46 32
LOY45_RS00860  198029 ..  198073 +  -4.3  -3.63895   TCTGAAACGGCGTTT TGCTATGCCTTTGCCGAAT ATTTTTC ATGCCGTAGAGGCATGGCG TTTCAGGTGCTTAGC  54 36
LOY45_RS00865 NONE
LOY45_RS00870 NONE
LOY45_RS00875  200252 ..  200281 +  -8.5  -5.60993   TCAGGCAATGCTTCA       GGGACCGGTCCTT CGGC AGGGGGTGGTCCC        TTTTTTTATGGACCC  95 51
LOY45_RS00880  201005 ..  201035 +  -3.8  -3.81027   TGGAACAGCACGCCC       TACGCCGCGCCTGA CCT TCAGGCGCTGACCA       TTTGCCTTGATTCGA  55 12
LOY45_RS00885  202171 ..  202183 +  -4.7  -3.08813   CCTCACCTTCGCCGT                CGCCC GAT GGCCG                TGTATTCGAATAAGG  47 167
LOY45_RS00890  203021 ..  203069 + -16.1  -3.14564   ATCCTGTGGGAGCGG GCTTGCCCCGCGATGCGATCT ACCAGTC AAATCGCATCGCGGGTCAACC TTGCTCCCACAGTGC  85 55
LOY45_RS00895 NONE
LOY45_RS00900 NONE
LOY45_RS00905 NONE
LOY45_RS00910  206490 ..  206506 + -12.3  -2.70932   GGCGTTGCCAGCGAT              GCAAGGC GCA GCCTTGC              TAATTCCGGGGCACC  70 123
LOY45_RS00920  209589 ..  209604 +  -2.5  -3.18681   CAAGGCCAAAAGGAT              CGGCT CGATGA AGCTG               TTGCTCGAGTTGCAG  44 106
LOY45_RS00930  211474 ..  211508 +  -2.6  -3.62046   TGACCAGCTGGCGGT     TGTCGCTGGCCTGGAC CTT GGGCAGGCCCTTGGCA     TTCTTGGCCAACTGG  50 385
LOY45_RS00940 NONE
LOY45_RS00945  213550 ..  213564 +  -5.6    -5.011   TTGAGTGCCTCAAGG               GTGCTC AGT GGGCGC               TTTTCTTCTTTGCGT  87 480
LOY45_RS00955  214660 ..  214680 +   -14  -5.60993   GGCGGGCATAAAAAA            GGGAGGCC ATCAC GGCCTCCC            TTTTTTTGTCGCACG 100 41
LOY45_RS00965 NONE
LOY45_RS00970  218245 ..  218257 +  -2.6  -4.35095   ATCACCGGCTGCCAT                GCTG CCCGT CGGC                TTTTGCCATTTTTTT  60 62
LOY45_RS00975 NONE
LOY45_RS00980  220311 ..  220337 + -12.3  -2.52543   TCGCGGGGCAAGCCA         GCTCCCACAAG CAGAA CCTGTGGGAGC         TGGCTTGCCAGCGAT  70 47
        ilvA NONE
LOY45_RS00995  223305 ..  223330 + -12.5  -3.28712   GCAGGTTCGGGTCGG         GGTCGACCGCC ACCG GGCGGGTGACC          TTCTCCAGCAGCGGC  71 155
LOY45_RS01005 NONE
        ptsP  227111 ..  227124 +  -4.5  -3.28791   CCGGCAGCTCGCTGT               CC-GCC GCC GGCAGG               TTATCCCCAAGCAAT  47 318
LOY45_RS01020 NONE
         lgt  229380 ..  229394 +  -4.2  -3.84451   ACAACCGCAAACCCA               CGGC CAAGGCC GCCG               TTTGAATTTCCACGG  57 6
LOY45_RS01030  230885 ..  230901 +  -3.6  -4.12188   TGCCCTCGCTGCGCG              CCGGCT CCGGC AGCAGG              TTTTCCCGCTCGTAG  60 492
LOY45_RS01040 NONE
LOY45_RS01045  234212 ..  234250 +  -9.6  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAGGGTACTG CATGTA CTGGACC-TGTGGGAGC   TGGCTTGCCAGCGAT  62 44
LOY45_RS01050 NONE
LOY45_RS01055 NONE
LOY45_RS01060  238301 ..  238313 +  -4.1  -3.05022   GGCTCCCACAGGTCC                TCTGT GCT GCAGA                TATCTCTGTGGGAGC  44 71
LOY45_RS01065 NONE
LOY45_RS01070  240230 ..  240243 +  -3.8  -2.74371   AATTTGCCTTCGCGC               CAGG TCTGCT CCTG                TGGTGTTGCCAGCTT  42 163
LOY45_RS01085  243870 ..  243880 +  -8.2  -3.30441   TCGCCGGGTACAAAC                 CGGC GCA GCCG                 TTCTGGCCGATGGTC  60 468
LOY45_RS01095 NONE
LOY45_RS01100 NONE
LOY45_RS01105  247896 ..  247906 +  -2.4  -2.57344   TGCGGCGCCACTTAA                 CGAC TTC GACG                 ATTCTGGGGAGCATC  38 126
LOY45_RS01110  250339 ..  250394 + -42.2   -4.5442   AGTACTGAGTCGAGG CCATCGCGGGGCAAGCCCGCTCCTAC ACCC GTAGGAGCGGGCTTGCCCCGCGATGC TTTTCTGCTTACAGC 100 33
        mgtE  253853 ..  253873 +  -3.3  -3.66874   AAAAATTGTCCGCAA           GCCA-CAC GATCAG GTGCTGGC            TTTCGGTAGACTTGC  50 80
LOY45_RS01125  255616 ..  255634 + -11.7   -5.4505   TTGCAGGCAAAAAAA             TCCCGGC ACCTG GCCGGGA             TTTTTTATTGCACCA 100 45
LOY45_RS01135 NONE
        mutM  259086 ..  259120 +  -8.4  -3.14132   GTTTACCGGCGGCCA     CGGCGTTGGCCTGGCT GCC GGCCAGGCCATAACTG     TTGCTGCCACGCGGG  57 424
LOY45_RS01175  265773 ..  265785 +  -2.6  -3.13164   TGGAGCAATAACGCC                CGGG CCTTA TCCG                TTCAATCGTTCAGGA  42 30
LOY45_RS01180  266705 ..  266753 + -18.3  -3.53091   CCTTTCGCCGGCAAG GCCGGCTCCCACAGAACT-GTG CAACAC CACAAATCCTGTGGGAGCCGGC TTTGCCGGCGAAGCT  95 68
        ftsY NONE
        ftsE NONE
        ftsX  274725 ..  274735 +  -3.2  -2.90234   GCCACTTGAGCGAGC                 TTGC ACC GCGA                 TAGTGTCTTTTTGCT  42 12
        rpoH  275731 ..  275748 + -12.7   -4.8269   GGCAATAACCAAAAA             GCCCCGA CGTG TCGGGGC              TTTTTCATGATTCTC 100 51
LOY45_RS01225  276327 ..  276352 + -15.5   -5.4833   TCAGCCAATAAAAAA         CCCGGCAAAGT GTGC GCTTTGCCGGG          TTTTTTATTGGCTCC 100 57
LOY45_RS01235  277524 ..  277565 +  -4.1  -3.56092   GCGCCTGAGCTGACC CGCGAGTCCGGATCGAGAC GAAT GGCGCGGCCCGGCCTTGGG  TTTGCGCCCTGATCA  52 28
        thiS  277811 ..  277833 +  -5.4  -3.65351   AGTGGTACACGCTAT           TGGCGGTGGC TAG GCCTTCGCGA           TTTACCTGCAAGTCC  56 13
LOY45_RS01245 NONE
        trmB  279707 ..  279728 +  -4.4  -3.61398   ATGGCACGCGCAAGG           CGCCTG CAAGGCCGCC CAGGCG            TTGTTCGACCCAGCC  53 334
LOY45_RS01300  287318 ..  287330 +  -9.1  -4.59773   TAGCGCTTGGCCAGG                GCCAG TTG CTGGC                TTTTTGGCAATACGC  83 38
LOY45_RS01310  288980 ..  289026 +  -8.4   -4.4009   GGCGGTGTCGATCTT CGCCGCTTCCGCCGGGGTGACC GGA GGTTGCGCCGGCACCGGCGGGG TTTTCTCCGGTACCG  80 401
        rpmE NONE
LOY45_RS01335  294828 ..  294848 +  -5.3  -3.00239   GGCCTTGACACAAGT            GACCGACCA GTC TTGTCGGCC            CTTTGCTCTTTGCGT  48 124
LOY45_RS01340  296201 ..  296224 +   -16  -5.24531   GCGTTGTAACCAAAA          GCCCCGGCTC GCGA GAGTCGGGGC           TTTTTTGTGGGGGAT 100 50
        pilM  300065 ..  300075 +  -2.4  -3.33162   GCAGCCCTGAAGGTT                 GCGC CTT GAGC                 TTCTGGGGTCGGGTA  44 17
LOY45_RS01355 NONE
LOY45_RS01360 NONE
        aroK  302765 ..  302793 +  -7.4  -2.87274   AGGGCACACCGTTAT       CGCGCGGT-TCGA GCCA TCGATGCCGCGCC        TAGTTCATTGTGGGG  54 77
        aroB NONE
LOY45_RS01375  305589 ..  305613 + -15.7  -4.52589   CTGAACATCGGTCAA          GCCTGCTGCGT ACT GCGCGGCAGGC          TTTTCTGTCCCAGAC 100 83
        gltB NONE
LOY45_RS01385  311911 ..  311930 + -13.6   -4.2803   AGTCGATAGACAAAA            GGCACGGT TGAT ACCGTGCC             TTTTACGTTGGGCTC  95 144
        hemE NONE
LOY45_RS01395  313540 ..  313594 + -38.2  -3.84451   TAACTAAAGAATGCA TCGCGGGGCAAGCCCGCTCCTACA CTGAACC TGTGGGAGCGGGCTTGCCCCGCGA TTTGCATTTCAGGCC 100 34
LOY45_RS01405  315927 ..  315948 + -10.9  -2.51464   TTCAGCGCAACGCCA           GCCATGACCG CAC CGG-CATGGC           ATTCGTAGGTGGTGG  61 67
LOY45_RS01520  335980 ..  335990 +  -6.8  -3.20164   TCGCCAATTGTCCGG                 CCAG TTG CTGG                 TTGGCTTCGCTGTCC  54 150
        betT  349721 ..  349746 + -15.5  -4.72272   GCTGATGGACCCGAA         GGGCTCTGTTC GCAG GAACAGGGCCC          TTTTTCATGGACGGC 100 46
LOY45_RS01570  352268 ..  352278 +  -8.2  -3.04144   CTTGCTTGCGCGCCA                 GGGC AAT GCCC                 TGTTGCAGCTGGCCG  56 201
LOY45_RS01595 NONE
        grxC NONE
        secB  358695 ..  358710 + -11.8  -5.45652   GCGATGTAGCAAAAA              GCGCCC TGAT GGGCGC               TTTTTTCTTGGGGAT 100 48
LOY45_RS01615  360070 ..  360092 +  -7.7  -2.71144   CTAGCAGCACGGCGG          CATCGC-GGC GGCG GCCTGCGGTG           TGCTTGAGCGCGGTC  51 433
        thiI  366672 ..  366685 +  -3.7  -3.54459   CCGCCATCGCCCTCC               CGACC ACCG GGCCG                TTTGAGCGCCATTCA  52 68
        typA  368597 ..  368634 + -22.9  -3.86015   TTAGTTCCGGCTGAA   TGAAAACGCCCCCGGTC GCAA GACCGGGGGCGTTTTTG    TTTGTGCGGGACATG 100 44
LOY45_RS01655 NONE
LOY45_RS01660 NONE
LOY45_RS01665  373518 ..  373536 +    -3  -4.29845   AGAGATGGATTTTCT             GCTGGAGC CGG GCTCAAGG             TTTTGAGTTGAATTC  61 1
LOY45_RS01675 NONE
LOY45_RS01680  376662 ..  376689 +  -2.5  -3.44284   GCCCAACAGGCTGCG        CAGCACTCCGG CAAACT CCCGCGCGCTG         TCTTCTTCCTGGGCA  46 108
        hutC  378853 ..  378875 +  -2.6  -3.01712   GCTTGGAAGGACGCT           TCAGCAAATG AGC CAGTTGCAGG           TATTACGCGCCAAAG  41 15
LOY45_RS01695  379441 ..  379467 + -15.8  -3.03124   GGACTAAAATTGTTA         CGCCCGGCCGAG CCG CTCGGTCGGGCC         TGTTACCGAATGACC  83 34
        hutU NONE
        hutH  383057 ..  383084 +  -7.6  -3.44146   CTCCCACCGTGGGGG        CGGGCTTGCC CCGGGATT GGCGCGCCCG         TTCATTCTCACGACC  61 73
LOY45_RS01710 NONE
        hutI NONE
        hutG  386591 ..  386622 + -14.5  -2.52543   ATCGCTGGCAAGCCA      GCTCCCACAGGGT GTATCG AACCTGTGGGAGC       TGGCTTGCCAGCGAT  78 56
         pip  387682 ..  387706 +  -4.1  -3.02144   GCGCCTGCTCGACCT          GCCCCTGGAAG AAG CATGAAGGGGC          TGTTGCAACGCGTGC  44 7
         dtd  388240 ..  388261 +  -6.5  -3.72588   TAATCGCGCGCTATG           TGGGCCTGC GTTC GCGGGTTCA            TTTCACTCTGACTTG  63 131
LOY45_RS01735 NONE
        mdoH  392711 ..  392756 + -14.9  -3.02263   CAATCGCCGGCAACG CCGGCTTCCACAGGGTT-GT ATGCACA ACTGACCTTGTGGGAGCCGG TGTTGCCGGCGATGT  82 59
LOY45_RS01745  393762 ..  393782 +   -14  -3.36823   CGGCTTGAAACCCGA            CGCGCAGG CTGGC CCTGCGCG            TTCGCTTTTACGGAA  83 58
LOY45_RS01750 NONE
LOY45_RS01755  395502 ..  395560 + -39.1  -3.87815   AGGTGCTTTAGGGCC CCATCGCGGGGCAAGCCCGCTCCCACC AGACC GGTAGGAGCGGGCTTGCCCCGCGATGC TTTCTACAGCTGGAA 100 30
LOY45_RS01810  403959 ..  403991 + -12.7  -2.65112   CTTCATCGCCGGCAA      GGCCGGCTCCCAC AGGATTC GTGTGAGCCGGTC      TGATCTGGATCAGTT  73 52
LOY45_RS01815 NONE
LOY45_RS01820  405317 ..  405352 + -16.8  -2.91144   CTGATACTGGCTTTA    TCGCGGGGCAGTGCGG CGAC CCGACTTGCCCCGCGA     TGCTTTCAACCCTCC  87 37
        pilG  421061 ..  421083 +  -9.9  -3.27029   AACAACACGCACCCT          GACG-CTGCG CCGC CGCAGGCGTC           TATTCCTTCATGGGG  68 24
        pilH NONE
LOY45_RS01910 NONE
LOY45_RS01915 NONE
LOY45_RS01920 NONE
LOY45_RS01925 NONE
LOY45_RS01930  430624 ..  430661 + -11.3  -3.09671   TGCGCAGTACCCGCG  GGCCCAGGC-GCGCGGC ATGGAA GCCG-GCAGCCTTGGCC   TGTTCGACTTCCGCT  66 96
LOY45_RS01945  434776 ..  434789 +  -8.1  -2.56596   AATACCCAGGCCAAG               GCGCA GTAA TGCGC                TGACTTCATCGCCGG  56 17
LOY45_RS01950 NONE
LOY45_RS01955  436233 ..  436252 + -16.4  -5.06414   CGCAACAAACAAAAA            CGCCGCCC CTAG GGGCGGCG             TTTTTGTTGGCGCGC 100 47
LOY45_RS02010 NONE
LOY45_RS02015  448888 ..  448906 +  -5.2  -2.78384   TCGGCGCGCACCTCT             CCGGTG ATCGCCC CGCCGG             TGTCCTGGGCGGCGA  44 168
LOY45_RS02025  450518 ..  450563 + -15.6  -3.53811   CCCATCGCTGGCAAC GCCAGCTCCCACAGGGTGCAC GGCAA GT-CACATTGTGGGAGTTGGC TTTGCCGACGATGGG  90 63
         tkt  457422 ..  457456 + -15.1  -2.52543   ATCGCTGGCAAGCCA     GCTCCCACAGGGG CTGCGGTGA TCCCTGTGGGAGC     TGGCTTGCCAGCGAT  80 73
         epd NONE
LOY45_RS02060  459757 ..  459772 +  -2.4  -2.53263   TGAAATGCTGGAACA              GCGGGC CAAG GCCTGA               TCCATTCGGCCTGGC  38 10
LOY45_RS02065  460002 ..  460017 +  -6.8  -3.21912   ACGAACATCAGCACC              GGGC-CC CGG GGTGCCC              TTGATCGGTTCAGGG  56 6
LOY45_RS02070 NONE
         fba  461577 ..  461592 + -10.4  -5.64274   GCCTGAACAGAAAAA              CCCGCA GCGA TGCGGG               TTTTTTTGTGCCTGC 100 41
LOY45_RS02080 NONE
LOY45_RS02085 NONE
LOY45_RS02090  464756 ..  464810 + -22.3  -2.57132   TATCCCTGAGGGCCC CATCGCTGG-CAAGCCAGCTCCCACA CAAT TGTAGGAGCGGGCTTGCCCCGCGATG CTTCTAGCCGCGACG 100 32
LOY45_RS02100  466329 ..  466339 +  -6.8  -4.26344   CCAGCTGGGTTTGCA                 CCAG ACG CTGG                 TTTTCGTCGAGCTCT  72 115
LOY45_RS02140 NONE
LOY45_RS02145  478878 ..  478898 +  -8.2  -3.15544   GGCGCGCTTGGCCAC            CTGCTCGC ACACG GCGCGCAG            TTGGTCGGAGTCGCC  57 249
        putP  484539 ..  484578 + -20.8  -4.07885   CTGCTGAGCTTCGCC  TGACAACGGCCCGGCCTC GCAA GAGCCCGGGTCGTTGTCG   TTTTGGCGGCCCGTG 100 45
        rlmJ  485505 ..  485515 +  -8.2   -3.0218   AGGAGCGGGCTTGCC                 CCGC GAT GCGG                 TATGTCTGAATGTAT  58 48
LOY45_RS02165 NONE
LOY45_RS02170 NONE
LOY45_RS02175  489385 ..  489396 +  -2.2  -3.64103   GACCGTTGGTGCAAT                C-CCG TGC CGGTG                TTTCAGGTGTGAGTC  48 2
LOY45_RS02180 NONE
LOY45_RS02185  491819 ..  491838 +  -4.2  -2.62396   GGGCATATGAGCCGG            CTGTCCTG GAAC CAGGGAAG             TAGTCTCAGAACATC  43 31
LOY45_RS02190  492686 ..  492708 +  -2.6  -2.79302   CATCATCCGGCCCGA           TGTAGGGGGT GCT ACCCCGTGAA           TATCGTCAACATCAT  39 56
LOY45_RS02195  493905 ..  493961 +  -2.8   -2.9155   CGTTTCGTCTGATCA TGCGCTTGCTCAACGGCGCCCGCATG AAGCG CATGTCGGCGACATCGATCAATCCCA TCTGCTGTTGCGGCG  42 132
LOY45_RS02205 NONE
        msbA  497516 ..  497538 + -13.4  -2.66272   ACCTGAGTTGCTCGC           GCCGGGGC CTGTTGT GCCCCGGC           TGCCTTTCCCTGGAG  75 35
        hldE  499100 ..  499110 +  -3.2  -3.77722   CTGGGCGACGCTCGC                 TTGC CCC GCGA                 TTGTTCCTACTTGCG  53 64
LOY45_RS02240 NONE
        waaA  504787 ..  504845 +   -25  -4.07568   CAGGCTTCGCCTGCC ---ATCGCCGGCAAGACCGGCTCCCACAG GTTT TTGTGGGAGCCGGTCTTGCCGGCGATTGC TTTTCAGGGGCGGGC 100 42
        thiC  508611 ..  508625 + -12.8  -3.68738   GGCGCGCACCGCATC               GCCGGC AAG GCCGGC               TTGTGTCTTGAGGTA  81 64
LOY45_RS02260  509787 ..  509800 +  -2.3  -4.37886   TTGCTCCCACAAGGG               CCCTG CAGT CAGGC                TTTTGTGGGAGCTGG  63 50
        cytX  511561 ..  511574 +  -5.9  -3.55444   CTTGGCTTGCAGGTA               GCTGC TGTT GCGGC                TTTCGGCGCTGGCCA  55 420
LOY45_RS02275 NONE
LOY45_RS02280 NONE
        cpdA NONE
LOY45_RS02290 NONE
        parE  516667 ..  516680 +  -3.1  -3.20382   TCCAAAGGTAACCTG               GCCGAG GTC CT-GGC               TTGATACGTCTGGCC  43 8
LOY45_RS02300 NONE
LOY45_RS02305 NONE
        parC  520551 ..  520561 +  -6.8  -2.87211   GGCTCCTTGCGGTAC                 CAGC GTG GCTG                 TGTATCCAAACGAAT  51 125
LOY45_RS02315  521351 ..  521368 + -12.7  -5.24531   GAGTGGTTACAAAAA             GCCCGCA GTGA TGCGGGC              TTTTTTGTGGGCGCT 100 44
        serB  524455 ..  524486 + -20.4   -4.1585   CCGCTCCCACAGGTA      TGAAAAAGCCCGCA TTGA TGCGGGCTTTTTCA       TTTTCAGGCTTGTGC 100 91
        motA NONE
        motB  529782 ..  529809 +   -17  -5.44119   CTGCTTGCGTGAAAA        CGCCCGTGCGCA GCGA TGCCCACGGGCG         TTTTTTTGCGCTACA 100 43
         orn  532235 ..  532277 +  -8.3  -4.29738   TCATCAAGTTCTGAG TGCAGCGCCGC-CGGCTTGT ACAG ACAATCCGCGCGGCGCCCCC TTTTGGTGCCTGTGG  77 27
LOY45_RS02370  533239 ..  533254 +  -4.6  -3.11634   GCTCATAACCGGCAC              GGCGCA GCGG TGAGCC               TTCGGTGCTGTCGAG  47 319
LOY45_RS02380 NONE
        tsaE NONE
LOY45_RS02390 NONE
        mutL NONE
        miaA  539798 ..  539811 +  -2.4  -3.06492   CACCTTGAAATACCT               TGGA TCGGTC TCCA                TATTGAGCTGAGTCC  42 1
         hfq  540173 ..  540185 +  -3.3  -3.15458   CGCTGAGCCAGGTAA                CGCCT GAT AGGAG                TCTGCTTTGTTCTTT  43 19
        hflX  541546 ..  541564 + -13.8  -4.14397   TCTGTAGCATTGGAC             GGCGCGCC GTG GGCGCGTC             TTTGCTTTATCAGAT  95 78
        hflK NONE
        hflC  543692 ..  543708 + -13.7   -5.1287   GTGTATGATGCGGCA              GCCGGGA AAT TCCCGGC              TTTTTTGCGTCTGCA 100 98
LOY45_RS02425 NONE
LOY45_RS02430  546446 ..  546477 + -17.4    -4.053   CCGCGACTGATGTAA      AGACAAAGGCCCCT TGAT AGGGGCCTTTGTCG       TTTCTGTCGGCTGAT 100 42
LOY45_RS02435  548965 ..  548998 +  -7.3  -3.63073   CTGCGTCGCGCCAAG     GGTGCGCGCTGCTTCT TCA AGCTGCGGCGC-CGCC     TTGTTCAAGGCTGTG  63 488
         rnr NONE
        rlmB  555495 ..  555508 +  -5.9  -4.07568   CTTGCCATGTTGGCA               GGCGT TCAT GCGCC                TTTTCCCAGGGCAAG  66 206
        rpsF NONE
        rpsR NONE
LOY45_RS02480 NONE
        rplI  557720 ..  557761 + -12.3  -4.72986   GGGTGTCAGCCGGTT AACATCGGGCACGATCCTGC TTT GCAGG-TCGTGCCCTTTGTC TTTTTCATCACCCTG 100 65
        dnaB  559303 ..  559318 +  -7.5  -3.86524   GCCTGAGCCTGTGAT              GCCGC GCCCAG GCGGC               TTTGTGCCAAGGTCT  67 140
LOY45_RS02500  566196 ..  566227 + -15.2   -4.0641   GCGCTGCCGCGCTAA      CTGAAACGCCAGCC TTCG GGCTGGCGTTTTTG       TTTGTGTCGCTGGCA 100 26
LOY45_RS02505 NONE
LOY45_RS02510 NONE
LOY45_RS02515  573234 ..  573249 +  -2.4  -3.78934   CTTGCCAGCGATGAG              GCCGGG TCAA TCAGGC               TTCTTGTCGACCCAC  51 136
         azu  574655 ..  574710 + -37.9  -3.05596   CTGCTTTGCAGCCCA TCGCCGGCAACGCCGGCTCCCAC ACCGATTACC GTGGGAGCCGGCGTTGCCGGCGA TTCAATCAGCGCCTC 100 52
LOY45_RS02540  578367 ..  578406 +   -17  -4.09864   AAAACAAAAATAACA  ACGGTAGGCGACCCGGGC TTGT GCCCGGGTCGCTACCCGG   TTTTGCGCCGTACCT 100 28
LOY45_RS02545 NONE
        livM  580718 ..  580734 +  -2.2  -2.90508   CGCGTAAAGGAGTGG              CGCCAT GAGCG ATGACG              TGATTCTCTCGGTTG  41 18
LOY45_RS02555 NONE
LOY45_RS02560  582327 ..  582345 + -13.1  -5.93809   CGGTAGCTGAAAAAA             CGCCCCG CTTGA CGGGGCG             TTTTTTTTGTCCACA 100 42
LOY45_RS02565  582942 ..  582958 +  -2.1  -2.79302   GCCGAACGCGGCGGC              GGGCATG CTG CAAACCC              TGTGATCAGCCTCAT  39 4
LOY45_RS02570  584050 ..  584064 +  -7.1  -3.05463   GGTATTCGGCCTGGG               CCCAG ATGCG CTGGG               TTGCGTCGCGCACCT  51 321
LOY45_RS02590  589088 ..  589108 +  -6.8  -3.88291   CGGTTCGCCGCCCAG            CTGGACGA TGCGT TCGGCCAG            TTTGTCGGCGTGCTC  64 379
LOY45_RS02605  591075 ..  591093 +  -2.3  -4.07568   CACCAGGCCGATGTT            GCCCGCGC CCAG GC-CGGTC             TTTTCCGAGAACAGG  58 276
LOY45_RS02615 NONE
LOY45_RS02620  592937 ..  592985 +  -9.3  -2.78384   AGAAAAAGTAACGTC TGCTGCTGGCGGCAGGCCCGCGG TTC TTGCGAGCCTGTCGCCACCCCCC TATGATCCGCGGCCC  60 30
LOY45_RS02625  593664 ..  593685 +  -3.6  -3.46511   CGGCGTCCCCTCGGC           TTGCCAGG CCTTGA CCTGGCCG            TTGTGGATTCTCTCC  49 235
LOY45_RS02635  595648 ..  595693 +  -9.7  -2.87931   GTGCAGCAATACTTT GTGGGAGCCGGCGTTGCCGGC GAAAGG GCC-GCAACG-CGGCCCCGGC TATCTCAGCCGTAAC  63 84
        cbpA NONE
LOY45_RS02650  598694 ..  598740 +  -3.4  -3.59946   CCAGCGCGTGCATCA ACTGCTGGCCCAGGCCACGGCG CCG TGCCGCGCTATGCACCAGCAGC TTCTGTACTTCCGCC  51 328
LOY45_RS02690  606250 ..  606264 + -11.4  -3.63895   CTTCGAGGCCTGGTG               CAGCGC GGC GCGCTG               TTTGCGGTAGTTCAG  74 245
        cobG  621678 ..  621694 +  -2.2   -2.8507   TTGCTAGACGCCTGC              TCACGG AGCAC CCTTGA              TGATTGATTACATCC  39 2
LOY45_RS02770 NONE
LOY45_RS02775 NONE
        cobJ  624809 ..  624832 +    -8  -3.14211   TCGAATAGCGTGAAA          ACCCCTGTCG ATAG CGACCGGGGC           TTCATGAAAAGGACT  60 83
LOY45_RS02785  625548 ..  625580 + -11.2  -2.71712   TACGAGATCTGACCG      CCCGGGGTGGCTCG CTCGC CGGGCCATCCTGGC      ATTTCAGGAGCAAGG  67 29
LOY45_RS02790 NONE
LOY45_RS02795  627196 ..  627215 +  -4.2  -4.18197   ACGTCCTGCTGCACG            TTGTCGGT CTGC ACCGCCGA             TTTTCCCTGGGCCAT  62 323
LOY45_RS02870 NONE
LOY45_RS02875  647709 ..  647739 +  -7.5  -4.91109   CAGAGTGGGGCTTCG      C-GGTCGGTACCCC GCCA GGGGCGTCGACCAG       TTTTTATCCTCACCG  86 161
LOY45_RS02880  648236 ..  648263 +  -7.7  -4.72486   CACTTTCAGGTTTTA        CACTGCGCCCGC CCCAT GCCGGC-CAGTG        TTTTTCGACTTTCTA  83 122
        speA  650278 ..  650291 +  -3.8  -3.21924   GTCCGGCTCCCACAG               GTGC AGTGCC GCAC                TCTTGTGGGAGCTGG  48 97
LOY45_RS02895  656813 ..  656827 + -11.4  -2.78463   GCTTGACCCGCGATA               GGGCCA CAC TGGCCC               TATCGTGGGACAGGT  69 47
        pbpC  659671 ..  659695 + -15.7  -2.74523   CTACGCTTGGATTGA          CGAGGCCGCCG CCC TGGCGGCCTTG          TACTGTTCGGGATCA  82 73
LOY45_RS02910  661386 ..  661400 +  -5.7  -3.85698   TTTCAGTTTTCAGCT               GTAGG CCGTT CCTAC               TTTGTGGGAGCGGGC  61 22
        cpaB NONE
LOY45_RS02930 NONE
LOY45_RS02935 NONE
LOY45_RS02940  665958 ..  665984 +  -3.6  -3.22521   CGCCGCGACTATTCG         GAACTGCAGC CGTGATT GCCGCAGTAC         TTGGCTTGATCTGCC  48 11
LOY45_RS02945 NONE
LOY45_RS02950  667998 ..  668037 +  -6.5  -3.61894   GTTGGTCTTGCCCTT GCTGACCAGCCGCGCCA CATCCAGC TGGCGCGG-T-GACAGC  TTGTTGAACAGGGTT  59 284
LOY45_RS02965 NONE
LOY45_RS02970  672889 ..  672906 +  -7.7  -3.30124   ACGGTCAGGCTCTTG             CTGGCGGC CGA GCCGC-AG             TTATAGCCGGTGACA  58 485
LOY45_RS03010 NONE
LOY45_RS03015  680379 ..  680404 +  -5.3  -3.33696   TGTAGCCGTCAGGTA         C-GGAAGCGCCG TAC CAGCGCATCCAG         TTCGTTGGACAAACC  52 36
LOY45_RS03025  683474 ..  683484 +  -6.8  -3.05463   GGACGAAGAACCGGC                 GCCA CCC TGGC                 TTCAGTAAGCGCCGT  54 7
LOY45_RS03045  687092 ..  687136 +   -18  -2.87132   GAAGCCGTCTGACCG CTGACGCTTGCGCGGTGGAT AAAAG ATTCATCGCGCAGGCGTAAG TCTGTCAGCGAAACC  88 29
LOY45_RS03050  688484 ..  688500 +  -2.2   -5.1861   GGTCGAGCTGAACCT             GCCATGG GCAG CCG-GGC              TTTTTTACTGATGCA  83 125
LOY45_RS03065  690729 ..  690747 +  -7.5  -3.84808   TATTACGTGTTACTC             CTACATG GTATG CATGTAG             TTCTTGTGGGTTGCA  67 58
LOY45_RS03070  691959 ..  691975 + -11.5  -2.75039   AGGCTGAACCGGAGG              CGCCTGC GTA GCGGGCG              TCGTTGCGGTGTCTG  69 34
LOY45_RS03125  705095 ..  705106 +  -2.2  -3.35798   GCGCCCAGGCATACC                CTCT TTCT GGAG                 TTCTGCATGAGCACT  44 80
LOY45_RS03130  706614 ..  706667 + -19.1  -3.45321   GCCTCTAAGGCGTTA GCTGCAAGCTGCAAGTTG-AGCGC GGTGCTA GCGCTTCTACTTGCAGCTTGAAGC TTGTGGCTTATAGCT 100 33
LOY45_RS03135  708750 ..  708766 +  -3.7  -3.32844   ATCACCTCCTTAATC              GACAG ACATCAG CTGTC              TTATGAGCTCCCACA  48 29
LOY45_RS03140 NONE
LOY45_RS03145  709007 ..  709047 + -10.7  -4.60889   CCACCTTACGTCAAA  GCTTAGAAATGAATATTCG GCT CGAATATTGATTTCTGAAC  TTTTTCAGAATCGTT  93 38
LOY45_RS03150  712219 ..  712232 +  -5.3  -4.15222   GTGTCTAACAAGACC               TTCTG GCAA CAGAA                TTTCTTGACGACCAT  64 145
         rrf  712360 ..  712395 + -19.2  -3.57639   GTCAAGATTAAATTC    CGAAACCCCTATCTGC GTAT GCAGGTAGGGGTTTTG     TCTTTCTGGCTGTTG 100 34
        recC  715947 ..  715957 +  -6.8   -2.6155   GGGAAAGAGGAGAGC                 GCTC GAT GAGC                 CTTGGTGTTGCCCCA  50 17
        recB NONE
        recD  721724 ..  721734 +  -2.4  -3.05597   AGCAGGTATAACCAC                 GACG ATT CGGC                 CTTTTACCGGATCGC  42 30
LOY45_RS03175 NONE
LOY45_RS03180 NONE
LOY45_RS03185  724198 ..  724239 +  -3.6  -2.53015   AGTCGGCAAAGCTCA TCGTGCGCGACTCGCCC ATCAGCAGC GGG-GTGTTGCGCTCGG TGACTTCGCGGATGT  41 43
LOY45_RS03195  726172 ..  726186 +    -5  -4.03321   TGAGTTTCGATGCGC               TGGTAT GCC ATGCCA               TTTGGTATTTCCTAT  64 344
LOY45_RS03200  727608 ..  727625 +  -5.5  -4.40358   AGATTTCAAGATGGC             GCTTCAC CAGC GTGACGC              TTTTCTGAACTGCGT  70 514
LOY45_RS03220 NONE
        mmsB  733432 ..  733443 +  -4.4  -2.87881   TCAGGCAAAAACGAA                GTAC TTGC GTAC                 TGTCTCCACCACTTC  44 142
LOY45_RS03240  735928 ..  735948 +  -3.2  -3.50853   TCGACGGTCTTTGAG           GGTGACAGC TTGG GC-GCCACC            TTGTGCTTGCCGAAC  49 318
LOY45_RS03280  743582 ..  743594 +  -4.7  -3.34398   AGTCAAATGTATTTT                GCCCC CGC GCGGC                TGTTTCCCCGCGAGG  49 414
LOY45_RS03290  744295 ..  744309 +  -8.5   -2.9914   TGAAGCCTTGCGCTG               GCCGC GCCAA GCGGC               TATCTATCACGGCTG  58 41
LOY45_RS03295  745307 ..  745320 +  -2.3   -3.2218   CGTGTTTGATAACTC               GTCTG ACAT CAGCC                TTAATGGCTGTTCAA  44 89
         ggt  747282 ..  747296 +    -7  -2.82516   TGCTGCGGCTGATCT               GCTCGG CCA CCGCGC               TCTGCTGCTCCGCCG  49 279
        pcaH NONE
        pcaG  751722 ..  751776 + -15.9  -2.80338   CTGCTTTGCAGACCA TCGC-TGGCAACGCCAGCTCCCACA ATAAATC TGTGGGAGCGGGC-TTGCCCCGCGA TCATTCGTACGTTGT  82 54
LOY45_RS03330  754459 ..  754470 +  -2.2  -5.64006   TCGCTGGCTTGCCAG                CGAT GGGT GTCG                 TTTTTTTGCTTGCAT  86 46
LOY45_RS03335 NONE
LOY45_RS03340 NONE
       quiC1 NONE
LOY45_RS03355  760681 ..  760703 + -12.7  -3.53091   GCGGCAACCCAGGGC           CCGGGCTGC GCATA GCAGCTCGG           TTTCCAGCGGGAAAT  78 258
LOY45_RS03365  762777 ..  762799 + -13.5  -2.52543   ATCGCTGGCAAGCCA           GCTCCCACA GGGTG TGTGGGAGC           TGGCTTGCCAGCGAT  75 49
LOY45_RS03380 NONE
LOY45_RS03385  766501 ..  766538 + -10.6  -2.52543   TCGCGGGGCAAGCCC   GCTCCCACAGGTTTTG CATGCA CCGGACTTGTGGGAGC    TGGCTTGCCAGCGAT  64 44
LOY45_RS03395 NONE
        cydB NONE
LOY45_RS03405  770812 ..  770837 + -16.9  -5.75945   GCGGCGGATTTACAG         CCCTTCGCAGC GTCA GCTGCGGAGGG          TTTTTTTTAGGGCCT 100 64
LOY45_RS03420  774034 ..  774051 + -14.1  -5.60993   AAGCAGCAAGAAAAA             CGGCGCC CGCA GGCGCCG              TTTTTTTATACCGGA 100 39
        radA  776058 ..  776071 +  -2.4   -2.8474   TGCAAGGCTTGCCGG               GTTG AAGTTG CAAC                TGATTCTCACTAACG  39 59
LOY45_RS03435 NONE
LOY45_RS03440  777726 ..  777748 +  -4.8  -4.08394   GCCGATTGTCGGTAG           CGCTGTTTTC CAC GAAACTGGCG           TTTTGACGACGATCT  61 51
LOY45_RS03445  778281 ..  778291 +  -2.4   -3.4214   TTTACTGACTTTCCC                 CGCG TTG CACG                 TCTGTTTGTTGAGAT  46 72
LOY45_RS03450 NONE
LOY45_RS03455  781820 ..  781847 + -12.8  -2.84098   CCCAGGCAAAAAAAA        GCGAATGGAAGA TCAC TCCTCCATTCGC         TGCTTGCTTACCCCG  74 42
LOY45_RS03470 NONE
LOY45_RS03475  786619 ..  786655 +  -5.8  -2.56596   TCTTCGAAGTAGTCG   CCATCACGCAGCGCGGA AATG TCCGAGTAGTG-GATGG    TGCGTTCGTAGGCGG  45 195
LOY45_RS03490 NONE
LOY45_RS03495  791146 ..  791184 + -17.5  -4.14392   CAAGGCAAGTGACAA  AG-CTGTGGGAGCCCGGT TTGC GCCGGGCTCCCACAGTCA   TTTTCAGCGTTCAGG 100 52
        yjiA  792177 ..  792208 + -10.1  -2.90941   CGGCGCTGACTTGAG      CTCCCCCTACCGC GTTTCG GCGATAGGGGGAA       TGTCTCAGATCTCGT  65 27
        ettA  800178 ..  800195 + -14.1  -5.40072   GGTTCTGCACTGGAA             CGGGGCC TTCG GGCCCCG              TTTTTTTGCCCAAAA 100 48
        gdhA  802174 ..  802194 +  -6.7  -3.34344   CTCCACCGGCTGGTT            GGCCTGGTC GGC GGCCTGGTC            TTCGTTGACGAATGC  55 475
LOY45_RS03550  807985 ..  808019 +  -7.8  -4.57569   GTACGAGTCAAAAAA     ACGGCGCTAAATGG AACATGA CCATTCGGCGCCGG     TTTTTCCACGCATGG  79 49
LOY45_RS03555  808491 ..  808513 + -15.6  -5.00895   AGACGCCTGCGCCAC           GCCTGTGGCA GCG TGCCACGGGC           TTTTTCTGTCATGGG 100 40
LOY45_RS03560  809084 ..  809123 + -20.8  -4.78752   GGCGTTGAGCCGGTC  AACAACCGCCCGTCCGTT GCAA AACGGACGGGCGGTTGCG   TTTTTGCCTTGTGCT 100 44
LOY45_RS03565  809535 ..  809561 +  -9.5  -2.78816   GCAGTGTGCTAGGCT        GCT-CGCCCTTT TCAT AAAGGGCGCGGC         TGTCATGCGCCCTGC  63 56
LOY45_RS03570  810566 ..  810595 +  -9.5  -3.01208   CAGATAAGTCATGGC       TATTCTCCTTGAA AGCG TTCAATGAGAATA        ATTCTTATTATCAAA  65 383
        rplU  812653 ..  812671 +  -5.3  -2.70354   CAAGATCACCGGTAT            TTC-GGCG TAAT CGCCTGAA             TCCATTTCTGGAGAA  46 16
        rpmA  812971 ..  812990 + -11.4  -5.04601   GCGAACGCTGGAAAA            GCCCTGTC TCGC GACGGGGC             TTTTTCGTTTGTGGG 100 45
        cgtA  814387 ..  814406 +   -15  -4.39166   TTGCAGTACACTAAA            CGCCGCTC TCAG GAGCGGCG             TTTTGGTATCTAAAG 100 45
        proB NONE
LOY45_RS03610  816321 ..  816335 +   -10  -3.53224   GAATCGGTACGAAGC               CCAGCT GCA AGCTGG               TTTCCAGCAGCGCTG  69 319
LOY45_RS03630 NONE
        rimI  822466 ..  822479 +  -3.7  -2.96695   CGACTACGCTCAAGT               CCCAG TCCG CAGGG                TGATTTGCTCCCGGC  44 131
         can  823755 ..  823767 +  -6.9  -2.99273   CCCATCATCTTCAGT                CCGGC CTG GTCGG                CTTTGTCCTGGTCGC  50 333
LOY45_RS03655  825479 ..  825500 +  -5.7  -2.68775   CTGGATGAAACCGCG           CGGCGCCCG CAGT TGGCCGCTG            TCGATTTCATCCTGG  46 145
LOY45_RS03665  826997 ..  827018 + -14.5  -4.81685   GCAGGCAAGAAAAAA           GGGCTTACC TTGC GGTAAGCCC            TTTTTAGTACTTGGT 100 59
LOY45_RS03690  832912 ..  832922 +  -8.2  -3.05384   AGGCGCACGATCTGC                 GCGG GGT CCGC                 TTCGATCCCGAGACG  57 370
LOY45_RS03700  833388 ..  833424 +  -7.2  -2.89935   ACCTCCTGACCTGGC   GGC-TGCATGCC-CGGCA TTT TGCCGTGGCTGGCGCGCC   TGTATCCGAATCTTT  56 32
LOY45_RS03705  834793 ..  834811 +  -5.2  -3.35046   CTTCTGCTTTTGGGT             GATGTCCT CGT AGGGCACC             TGTTTGAGAAAGTGG  51 143
        hemA NONE
        prfA NONE
        prmC NONE
LOY45_RS03770 NONE
        murI  847509 ..  847525 +  -5.2  -3.02881   ATTAGGAAATAGGAC              GTTTCT CATGA AGAAAC              TGCTTTGCTTGGCTG  48 134
LOY45_RS03780  848361 ..  848394 +  -7.3  -4.62069   GCAGTGCGGAATAGC     GGCTGAGCACCGCCA GGAC TTGTGGTGCCTGGCC      TTTTTCCAGTAGCGG  85 352
LOY45_RS03810  854336 ..  854351 +  -3.2  -3.80573   CTGAAATAGGACGTT              GCATGA CCGA TCACGC               TTTGCTGCTGGTCAA  53 37
        hemH  855391 ..  855434 + -13.9  -3.53811   CCCATCGCCGGCAAC GCCGGCTCCCACAATG-GCA ATGCA TGCACTCTGTGGGAGCTGGC TTTGCCAGCGATGGG  82 62
LOY45_RS03830 NONE
LOY45_RS03835  858614 ..  858657 +  -2.3  -4.70626   GATGACGCAGTCCCA TGCTAGAGTGCCAGGCTGCC CCCAA GG-AGCCTGTCATGCGTGCA TTTTTCCCCTTGTTG  69 47
LOY45_RS03840 NONE
LOY45_RS03845  859500 ..  859513 +  -9.5  -5.60993   GCGCCCATAAAAAAA               CGCCC CGAA GGGCG                TTTTTTTATGCCGGC 100 48
LOY45_RS03860  862646 ..  862687 + -23.3  -2.91924   GAATAAATCCCAACA GCAAAAAGCCCGATGTCTGC GTG GCAGGCATCGGGCTTTT-GC GTTTCTGGGCGCTCA 100 35
LOY45_RS03870  863372 ..  863398 +  -9.4  -2.52543   ATCGCTGGCAAGCCA         GCTCCCCCAG AGTGTTC CTGTGGGAGC         TGGCTTGCCAGCGAT  58 61
LOY45_RS03880 NONE
LOY45_RS03885  865145 ..  865155 +  -2.4   -2.9045   AACCGGAGAACATCC                 CCGG AAC CCTG                 ATTTGCTAGGTTTTT  41 6
LOY45_RS03890  866147 ..  866183 +  -8.6  -3.06671   ATGCTCTCCAGTGCC   TCGGCGGC-GCGGGCGG CCTG CTGCACGCTGTCGTCGG    TCTTGCCCTGGCTGT  57 372
LOY45_RS03900  869067 ..  869105 + -12.5  -2.52543   TCGCCGGCAAGACCG  GCTCCCACAGGGGCCTGT GTAT ACAAGGCC-TGTGGGAGC   TGGCTTGCCAGCGAT  72 69
LOY45_RS03930  873762 ..  873813 + -14.4  -2.59564   GGTTGAGCGCCACTA GTCCCTGCAGCAGCCAAATCATTC CTTT GGCTGATTTGGCCGCTGCTGTGGC GTTCTAGAGTAGGAC  78 49
LOY45_RS03935  875821 ..  875835 +  -2.1  -3.85817   AAGGTGCGCTCACAC              CGC-TC GACC GATGCG               TTTCTGCAAAGGACT  51 295
LOY45_RS03940 NONE
LOY45_RS03945  879202 ..  879232 + -17.7  -3.58343   CTCCGTGTGATCTCC      CAG-AACGCCCCGG CTTG CCGGGGCGTTTCTG       TTTGCGCATCCTGAC 100 50
LOY45_RS03950  882174 ..  882186 +  -5.5    -4.015   GGCTATAAACGATGA                TGGCG CAA TGCCA                TTATTTGCTCCGTGA  62 94
LOY45_RS03955 NONE
LOY45_RS03960  884705 ..  884751 + -10.3  -3.72695   CTTCTTGAAGTGAAG TGAC-GAGCGTCGTCGCAGGC ACAACCG GCCTGTG-CGACACTCCGTCA TTTGCTCCACAGGAT  77 55
LOY45_RS03965 NONE
LOY45_RS03970  886228 ..  886244 + -13.7  -5.28176   GCAAGATGTGAAGAA              GGGGAGC CTG GCTCCCC              TTTTTTGTGCCTGCA 100 44
LOY45_RS03975  887309 ..  887323 +  -7.8  -3.06915   GACCTTGAGATTATG               CAGGTC CTT GGCCTG               TTCGCTCACCTGGAT  55 498
LOY45_RS04000  891299 ..  891352 +   -16   -4.7373   TCAGAGAGTCGCGAA GGCGCCCGGGCAAGTCCGTC-GCTCC AGCA GGGGAAGACGG-CTTGGCAGGGCGCC TTTTTAATGGGCTGG 100 56
LOY45_RS04005  891911 ..  891966 + -30.6  -3.08679   CTGGCCTGATCGGCC CCATCGTGGGGCAAGCCCGCTCCTGC AGAA GTAGGAACGGGCTTGCCCCGCGATGC TGTTCAATCACCCAG 100 32
LOY45_RS04010  893330 ..  893349 +  -4.9  -3.16683   TCCAGGAACCAGCAG            GCGGCAT CGATAA AGGCCGC             TTCGTCCCCTGGCAT  47 199
LOY45_RS04020  895832 ..  895880 + -12.4  -2.52464   CCAACCAGCTGTCGA GCTGATGGAGGTGCCGCGTAGCC GGGC GGCTACGCGGCGATGCC-TCAGG TACGTTCGCGCACCC  70 21
LOY45_RS04030  897454 ..  897490 +  -2.2  -4.57569   TGCCGACTACCTGGC   CGAGAACGCCGCCAGCCT GTA AGGC-GGC-GAGTTAACG   TTTTTCAGGACCTGC  65 4
        trxB  898649 ..  898664 + -11.8  -5.76633   TGAGCTAACAAAAAA              CCGGCC TGAT GGCCGG               TTTTTTTGTGTCTGC 100 101
LOY45_RS04045  901984 ..  902000 +    -3  -4.11692   CGCCAGGCGCAAGCA             CGC-TAG ATTC CTACGCG              TTTTAACGATGCATC  58 20
        ampD NONE
        ampE  903461 ..  903510 +  -4.1  -3.17075   TGTGGACAGTGCTCG GCTGAAGCCCATCGCGGAGCGGCC GTT GGTCGCTCCGCTGGCGG-TTAACC TTAAGTTACAAACCC  46 21
LOY45_RS04060  905715 ..  905730 +  -3.2  -3.06073   CGTTCCGGGTCTGAG              ATCAGC GGTT GCTGAA               GTTTTCCGCGCTGTG  43 27
LOY45_RS04065  907103 ..  907139 + -16.7  -3.78775   GCCCTCGCTAAGCGT    TTGTTGCCGCACCTG TTTTCCC CGGGTGCGGCAACAG    TTTCATCCTCGAAAC 100 44
LOY45_RS04070 NONE
LOY45_RS04075  909096 ..  909118 + -10.5  -3.63837   AACCTTCGTTCTGCC           CGGCAGCGT TGTCT ACGCCGCCG           TTGTTGAAGGCTTGT  71 215
LOY45_RS04100  912362 ..  912386 + -11.3  -3.74762   GTTGCTCAAGCGTCA          GGCGCCAGGGT CGG ACCACGGCGCC          TTCTTCATAGATGTT  77 330
LOY45_RS04115 NONE
LOY45_RS04125 NONE
LOY45_RS04130 NONE
LOY45_RS04135  916984 ..  917027 +  -2.2   -2.7404   ATTCAGCGCCTGCCC GCTTGATTGTGTGCCAGCCA GTGC TGGCTGACACTCGGGCATCC CTCTCTTTTGTTCTG  39 84
LOY45_RS04140 NONE
LOY45_RS04145  918771 ..  918787 +  -2.2  -3.67068   GGACACTTCTCTCGG              GTTGCT GAGCA AGCCAC              TTTGGAGCTTTTCGT  48 402
LOY45_RS04150  922457 ..  922469 + -10.5   -2.6462   CGCGCAGTAGCGAAA                GCGGC AGC GCCGC                CTCTTTCAATACGTC  58 501
        hmgA NONE
        fahA NONE
        maiA NONE
LOY45_RS04175 NONE
LOY45_RS04185  929599 ..  929628 +  -4.9   -5.0133   GATACCGGCATCCTC       GACCTGCTGTTCGC TCA GCGA-CGGCACGGC       TTTTTTCAGGACCTC  85 141
LOY45_RS04195  930766 ..  930778 +  -9.1  -4.20531   GTCGCAGGATTAAAG                GAGCC CCA GGCTC                TTTTCGCTGACTCTG  79 304
        cyoA NONE
        cyoB NONE
LOY45_RS04210 NONE
        cyoD NONE
        cyoE  935905 ..  935930 + -20.5  -6.06529   AGCGTGTAATGAAAA         CGCCCCAGGCT TCAC AGCCTGGGGCG          TTTTTTTTGTCTCTG 100 47
LOY45_RS04225 NONE
LOY45_RS04230 NONE
LOY45_RS04235  939595 ..  939627 + -15.6  -3.25204   CTACTGAGGCGCTGG      CCCTGGCAGCGGGT TTCGT GCCCGTTGTCAGGG      TGTCTTTCCGCCTGC  87 34
LOY45_RS04240  940903 ..  940924 +  -7.9   -3.1855   CCGCAGTGGCCAACG           TCGCTCGGA CGGT TCCGGGCGC            TTACGTCTTCGAGGA  57 98
        alaC  942305 ..  942315 +  -4.6  -3.34369   GCCATCACCACCGTC                 CGTC AGC GGCG                 ATTTATTTCTGCATT  49 166
LOY45_RS04250 NONE
LOY45_RS04255  943431 ..  943443 +  -6.2  -3.21593   TAATCAAGCGCGGCA                GCGC CGTCT GCGC                TATTGTCGCGCGCTC  54 42
LOY45_RS04260 NONE
LOY45_RS04265  945061 ..  945074 +  -5.3  -3.44146   AGGCTCCTCAAAAGT               GACTT GCCA AAGTC                TTGGTTATCCACCCC  54 524
LOY45_RS04275  946044 ..  946060 +  -7.9  -2.71483   GAGCGGCCCCGCGAT              CGAACGC GTA GCGCTCG              TAATTCAAGCGATGT  53 15
LOY45_RS04280  946980 ..  947023 +  -7.3   -5.0133   CAGCTGCCGACGATG CG-GCCCTCGTCTTCAAGCA CGAAC TGCTCGACGCCGCGGGCGCG TTTTTTCAGCACATC  95 479
LOY45_RS04295 NONE
LOY45_RS04300 NONE
LOY45_RS04305 NONE
        phnE  952448 ..  952476 +  -3.9    -3.727   TATCTGAACGCAGGC       CAGCGC-CTG CTCAACCCGC CAGCGCGCTG        TTTCCATCTCGTGCA  55 457
LOY45_RS04330  954129 ..  954151 +  -7.6  -3.61517   TCGTTGGCGAAGTTG           TTCGAGCGGC TGC GCCGGGCGAA           TTCTTCGGGCGGGAT  63 493
        sodC  957464 ..  957479 + -10.4  -4.49364   CCGGGCACAAAAAAA              CCGACC CTAG GGTCGG               TTTCTTGTTGCGTTT  88 152
        queA NONE
         tgt NONE
        yajC  960269 ..  960294 +   -14  -3.01712   CAGTTTTTTACCAAT         CGACGGGGCGC GCAAG GCGCCCCG-CG         TCTTGAACGGGCGGC  80 45
        secD NONE
        secF  963131 ..  963153 + -14.9  -5.67063   TGGGTCGTACAAAAA           GGCGCGAGT GTTGA ACTCGCGCC           TTTTTTTATGCTCCA 100 57
LOY45_RS04390  963917 ..  963932 + -10.4  -5.80817   TAAGGCCAAAAAAAA              GCACCC CGAA GGGTGC               TTTTTTTGTGTTCGA 100 175
        trmJ NONE
        cysE  966480 ..  966499 +  -8.5  -3.59803   GACGCATTGACAGAA            GGGGCGT GCGCAA GCGCCCC             TTAGTTTGCTATCAT  66 31
        iscR  967109 ..  967122 +  -2.3  -3.53012   AGATTGAGACGTCTG               CCGTC GAAT GACCG                TTTCGACGCGCGGCG  46 15
LOY45_RS04415  968383 ..  968397 +  -4.2  -2.94099   GCGCACTAAGTAGTC               GCCG GCAAGAG CGGC               TCTCTGATGAGGAAG  46 32
        iscU NONE
        iscA NONE
        hscB  969693 ..  969717 +  -5.5  -2.75074   GCCTCGACGATTAAC          CCGGCGCTGCT TCT GGCGGCGCCCC          TGGTATTCAGATAAG  47 27
        hscA NONE
         fdx NONE
        iscX  972189 ..  972207 + -10.2  -4.34557   GGCAATCCCTTGGAA             CCCGCGTA TAA TTCGCGGG             TTTAATTTTTCGCTT  86 58
         ndk NONE
        rlmN NONE
        pilW NONE
LOY45_RS04465 NONE
        ispG NONE
        hisS NONE
LOY45_RS04480 NONE
        bamB  979970 ..  979990 + -18.3  -4.51238   TGCCGCTCGAACTCC            GGCCGCTGC AGT GCAGCGGCC            TTTGTATTTTCTGAA 100 86
         der NONE
LOY45_RS04495 NONE
LOY45_RS04500  984067 ..  984077 +  -6.8  -3.01712   TGCCGGCGCCGGCAG                 GTGG AAA CCAC                 TGTTACGACGCAAAC  50 515
LOY45_RS04515  989444 ..  989459 +    -4  -3.27525   GCGCCGCTGGATCGA              GGTC-TG AGC CATGACC              TTCGCTTTGCGCAAC  48 19
LOY45_RS04520  990238 ..  990258 +  -9.6  -2.72379   GGGTTTCCCCTTGGA            GGGCGACG CTTGC CGCCGCCC            TCGTTCAGGCGTTAC  62 48
LOY45_RS04530 NONE
LOY45_RS04535  993602 ..  993622 +  -2.5  -3.54459   GTCTTCCTGCCCAAC            TGCAACTGC CAA GCATTTCCA            TTTGCACGGCATTGA  48 65
LOY45_RS04540  996113 ..  996168 +   -32  -3.57144   GTAGGCTTCTGAGGC CTGATCGCGGGGCAAGCCCGCTCCCA CATG TAGGAGCGGGCTTGCCCCGCGATGCG TTTCAGCGTCAGGCC 100 29
LOY45_RS04565 1001540 .. 1001564 + -15.7  -3.08464   TCACTGATTGTCATA          CCCCGCCGC CTTCGGT GCGGCGGGG          TTGCCTCCCTCATGG  85 34
LOY45_RS04640 NONE
LOY45_RS04645 1019824 .. 1019871 +  -8.4  -3.02144   CCATCGCTGGCAAGG CCAGCTCCCACAGGACTT-GTGC ATG GCACTGACCTTTGTGGGAGCCGG TCTTGCCGGCGATGG  58 63
LOY45_RS04660 NONE
LOY45_RS04665 1024656 .. 1024677 +  -4.3  -4.51812   CATCGCCCATGACCT           GGCGGCGAA CCTG TTCGCCGGA            TTTGTTGTTGTCGCC  71 386
        mreB 1030843 .. 1030862 +  -7.8  -4.19817   CTGTATGTGCTGGGC            TGACGTCC GTGT GGGCGTCG             TTTTCCGTCAATCCG  74 95
        mreC NONE
        mreD NONE
LOY45_RS04715 NONE
         rng 1034726 .. 1034753 +  -2.6  -2.70932   CAATGCGCGCTGTCC        GGGCTGGCAAACC GCC GGCTTGC-GGCCA        TAGTTAAGGCACGAA  38 55
LOY45_RS04725 NONE
LOY45_RS04730 NONE
        tldD 1041285 .. 1041296 +  -7.2  -3.83318   CGCTTGGCCTCGTTC                GCGG TGTG CCGC                 TTGTGTTCTTCCAGA  64 408
        pmbA 1043038 .. 1043070 +  -8.4  -5.77571   CGTTCCTACACCCCC      TCCAAAAGCCCGGC CATGT GTCGGGCTTTTTGC      TTTTTCTTTTTTCAT 100 142
LOY45_RS04750 NONE
LOY45_RS04755 1044916 .. 1044930 +  -3.4  -3.59979   GGGATCTGAGCCGGT               CCACCG CTC TGGAGG               TTTGCCATGCAGCAC  50 32
LOY45_RS04760 NONE
LOY45_RS04765 1046006 .. 1046018 +  -3.3  -2.66733   TACGCAGCCGCGCTT                GTGTG AGT CGCGC                TGGTATGCGTTCGGA  40 20
LOY45_RS04770 1047044 .. 1047064 +  -9.8  -3.05844   CTTTACCGGCCGCCA            GCATCATG ACCGC CATGATGC            TCTTGCCATCGACCA  60 153
LOY45_RS04825 NONE
        mlaE NONE
        mlaD NONE
LOY45_RS04840 NONE
LOY45_RS04845 1057239 .. 1057284 +    -6  -5.39721   GCCAGCCAGCGACTG GCCCCTCTGTCAGAG-TCTCCG ATTA CGGGGTTCGCAGGC-GAGGGGC TTTTTTGTATGATGG  91 43
LOY45_RS04850 NONE
        murA NONE
        hisG 1059613 .. 1059639 +  -7.2  -2.88861   ACCGCGGCTGACTTC         TGCGCGCGAC CTTCGCT GTCGCGCCCG         TCTATCCGCGTCATA  54 30
        hisD NONE
        hisC 1062141 .. 1062197 +  -9.1  -2.75081   TCGCGGGGCAAGTCG AGGCGTCGCACCGCCGCTCCCACAGTG ACC CTCTGTGGGAGCGGGCTTGCCCCGCGA TGGATTTTACCGGTA  60 57
LOY45_RS04875 NONE
LOY45_RS04880 1064224 .. 1064268 + -27.3  -3.15663   AGCCATCGCCGGCAA GGCCGGCTCCCACAAGAGTAC GGC GCACTCTTGTGGGAGCCAGCC TTGCTGGCGATGGCT 100 52
LOY45_RS04885 1064865 .. 1064880 +  -3.2  -3.61356   AGGCGGGGCGCTGAG              GCGC TAAGCTGT GCGC               TTTGCCGTCGATAGT  50 27
LOY45_RS04890 1065470 .. 1065514 +  -3.5  -4.36914   CGAGGGCCACCGGCT CGCCGGCCTTGGTCTGGCTG GTGGCG TAGTC-GACCAGGGTCTGGG TTTTCTCGCGGGCGG  66 293
LOY45_RS04900 1066901 .. 1066925 + -22.9  -5.65177   AGCAGCTCGAAAAAG          CCGCGTCCGGG TTG CCCGGACGCGG          TTTTTTTATGCCTCT 100 46
        lptF NONE
        lptG 1075832 .. 1075849 + -12.7  -5.28778   TGCACACAAGAAAAA             GCCGACC CTTG GGTCGGC              TTTTTTCTGCCTGCT 100 46
        arcD 1092015 .. 1092063 +  -8.8  -3.53012   CCCATCGCCGGCAAG GCCGGCTCCCACAGTAGATCGGT GTGC AGCAAACT-CTGTGGGCGCTGGC TTTGCCAGCGAGAGG  66 58
         edd NONE
LOY45_RS05050 NONE
LOY45_RS05055 1106169 .. 1106210 +  -2.7  -2.76046   CGCGCACTGAAGGGC GCTGGCGCCTGCCGCTGCCA CGC TCGCTGCTG-GGGCGCATGC TGCTGTTGACCTTGC  41 31
LOY45_RS05060 1107611 .. 1107644 + -18.3   -2.6072   GACTGAAATTCTGCC     TGGGCGAATGTCACC AGCT GGTGACATTCGCGCA      TCCCTTCGTTACCTC  86 35
LOY45_RS05065 1109053 .. 1109091 +  -8.1  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAG-GGTCGGT GCAT GCAGTCCATTGTGGGAGC   TGGCTTGCCAGCGAT  55 70
LOY45_RS05070 NONE
LOY45_RS05075 NONE
LOY45_RS05080 NONE
LOY45_RS05085 1113514 .. 1113547 + -13.3  -2.52543   ATCGCTGGCAAGCCA     GCTCCCACATGGATTG CGC TGATCC-TGTGGGAGC     TGGCTTGCCAGCGAT  75 87
LOY45_RS05090 1114659 .. 1114698 +  -6.2  -4.07568   GCTGGCCTTGGCCAA  CGGCGAGTCGGCG-GCGGT CAG GCCGAGCACCGAGGCGCCG  TTTTCCCGGGCCAGG  66 234
         zwf NONE
         pgl NONE
LOY45_RS05110 1118411 .. 1118431 + -10.4  -6.11644   GCTACACGGCTTTGA            GGTGCGCT TGGTC GGCGCACC            TTTTTTTTTGCCTGC 100 58
LOY45_RS05150 NONE
LOY45_RS05155 NONE
        guaB 1130775 .. 1130806 + -11.6  -3.71917   TTCAGGCAACACTTG      CTA-GCGGGGCTGTT ATC GACAGCCCCGCGTCG      TTTCCGATTTCCACT  80 44
        guaA 1132435 .. 1132461 + -20.2  -5.61596   CGGTTGCTTGAGAAA         GCGCCATGTCCC CTC GGGGCATGGCGC         TTTTTTTGTCGCGAT 100 47
LOY45_RS05170 1135193 .. 1135234 +    -3  -3.73534   ATCGTATTCGCCCTT CATCGCCGGTCCCTTGGC GCTTTTCA GCCC-GGTACCGGC-ATG TTGTTCCTGGCATTA  53 85
LOY45_RS05175 NONE
        tadA 1137131 .. 1137145 + -12.8  -3.68738   AGGCCTGAGCCCATC               GCCGGC AAC GCCGGC               TTGTGTCTTGAGGTA  81 33
LOY45_RS05185 1138571 .. 1138595 +  -7.8  -3.40611   GTCTTGCTGTACCAC          TGCTTCTGCG ACAGG CGCGGCAGCA          TCTTCTTCACGTCCA  58 314
        purL NONE
LOY45_RS05200 1144309 .. 1144334 + -18.3  -5.43414   AAGGGCTGAAAAAAA         GCCGCGACCTG TGAT CGGGTCGCGGC          TTTTTTGTGTCTGCT 100 39
        gspK 1153918 .. 1153959 + -13.8  -3.17075   AGGTGCAAGTGATCA GC--CGTTCGCCGCAACCCT GGTA AGGGCTGCGGCGAGCGCCGC TTGGGTTACACGCCG  78 3
LOY45_RS05255 NONE
LOY45_RS05260 NONE
        gspD NONE
LOY45_RS05270 NONE
        gspF NONE
        gspG 1163371 .. 1163387 +  -4.3  -3.09018   ACTGGGAACTCTAGG              CATGCGC GGC GAGCGTG              GTTTTACCCTGCTGG  47 27
LOY45_RS05285 NONE
LOY45_RS05290 NONE
LOY45_RS05295 NONE
LOY45_RS05300 NONE
        gspM NONE
LOY45_RS05310 1167106 .. 1167117 +  -7.2  -3.18264   GCGGTAATAGTCACG                GCCC TGCA GGGC                 TTGCTGGGTGACGGG  54 240
LOY45_RS05335 NONE
LOY45_RS05340 1175767 .. 1175778 +  -2.2  -2.50816   ATGCCCGCGACCTGG                CC-CC GCA GGAGG                ATTGATGAGTACGCC  38 9
LOY45_RS05345 NONE
LOY45_RS05350 1176514 .. 1176532 +    -8  -3.27022   ACGGGTGGTCACCGG             CTGAGGCC AGC GGCCGCGG             TTCATGTAAAATGGC  62 22
        purT 1177798 .. 1177853 + -42.2  -4.11216   AGGTAGAGTTCTAGG CAATCGCGGGGCAAGCCCGCTCCTAC CGGT GTAGGAGCGGGCTTGCCCCGCGATGG TTTTACAGCTCCGAG 100 27
         ffh 1183148 .. 1183172 + -11.6  -2.72511   CAGATCTGCAGGCTG          GCCTTTTTAC CTGGC GTAAAAAGGC          ATTTGCAAAAGTCCG  67 135
        rpsP NONE
        rimM NONE
        trmD NONE
        rplS 1185261 .. 1185276 + -10.4  -5.60689   CACCATGCGAAAAAA              GCAGCC TTCG GGCTGC               TTTTTTGTTGTCTGA 100 66
LOY45_RS05400 1186037 .. 1186071 +  -4.9  -3.36803   GCGGCTGGCTCCCCA    GCGTCTG-CCCGCGAT GCTC ATCGCTGGCCCGGTGC     TTGTCGCTGCGCTTG  51 339
        xerD NONE
LOY45_RS05415 NONE
LOY45_RS05420 NONE
LOY45_RS05425 NONE
LOY45_RS05430 1194168 .. 1194206 +  -2.8  -2.71712   GCTCCCGATCGAGCA   CGCCTCCGACCACCGCCG CTT CTGTGGTAGGCTTGGGCG   GTTTGCACCGAGGGC  40 82
        dsbC 1195059 .. 1195079 + -13.3    -3.737   GTGGCGGCAGTTTCA            CGATCGGCT GCC AGCCGGTCG            TTTCATGGGGAGTTC  88 66
LOY45_RS05440 NONE
        thrC 1197940 .. 1197956 + -13.7  -5.72622   ATCGGCACATGAAAA              GCCCGTC TCT GACGGGC              TTTTTTATTTCTACA 100 48
LOY45_RS05450 NONE
LOY45_RS05455 1203108 .. 1203124 + -10.1  -3.01712   GTGGCGACAAGGCCG              CCTGGTC ACG GGCCAGG              TCTTCGCGCACGGCA  62 224
LOY45_RS05465 1204123 .. 1204150 + -13.4  -4.89063   TGGGCTTCTGTTTAA        CCCCGGGCGG CCTCCCCA CCGCTCGGGG         TTTCTTTTTGCCTGC 100 134
LOY45_RS05480 1206988 .. 1207000 +  -3.4  -2.56164   GCTGATCGCGCGCCC                GTTC CGGTC GAAC                ATTCCTGATTCACGA  39 36
        recJ NONE
LOY45_RS05490 1210410 .. 1210442 +    -9  -3.16191   GAAGTGCCATACAGG     CGCCCGCGTCC-GGC ACGG GCCTGGTCGCGGCTG      TTCATGCCGCTGTCG  57 469
LOY45_RS05525 1218411 .. 1218428 +  -4.1  -4.77036   AAAGCGCGCAGCCGC             TGGGC TATACTCT GCCCA              TTTTTCCTGCTCGCG  72 102
LOY45_RS05530 NONE
LOY45_RS05535 NONE
LOY45_RS05540 NONE
LOY45_RS05545 NONE
LOY45_RS05550 NONE
LOY45_RS05555 NONE
LOY45_RS05560 1226858 .. 1226874 +  -6.5  -2.52464   GGCCAAGAACAATGG              CCGCAAC CAG GTTGGGG              TGGATTGACAGCAGC  50 1
        prfB 1228134 .. 1228178 + -11.2  -2.52464   GCAAGGGCTGTAACC GCGCGGCCCCGGCCTGCTCC CTGAA GGAGCGGGCTTGCCCCGCGA TCCCTTGCCCAAGGC  67 28
        lysS 1229746 .. 1229763 + -10.5   -4.7497   GAGCGAACTGAACAA             GCCGCCT TCCG GGGCGGC              TTTTTCATGCCTGCA  95 39
LOY45_RS05575 NONE
LOY45_RS05580 NONE
LOY45_RS05585 NONE
LOY45_RS05590 NONE
LOY45_RS05595 1233755 .. 1233774 + -10.7  -4.00445   CAACACAAACAAAAA            TCCCGCC AGACTC GGCGGGA             TTCTTGTTACTGCTC  79 149
         ppc 1238474 .. 1238496 + -17.8  -2.73364   ATGCTTGTAAAGCAA           CAGGTTGCGC CCG GCGCAACCTG           TGCTTCAAGTGGCCA  88 84
         adk 1239344 .. 1239367 + -18.2  -4.11183   GCTCGGTAGTGCAGA          CAACGGCCCG CTTG CGGGCCGTTG           TTGTTTATAATGCCG 100 46
        tsaB NONE
LOY45_RS05630 NONE
LOY45_RS05635 NONE
LOY45_RS05640 NONE
LOY45_RS05645 1243167 .. 1243185 +  -6.7  -3.24747   GCCTTGGCTCATGAC            CACC-GGG CGTA CCCAGGTG             TTGCTGATATCCAGC  54 242
LOY45_RS05655 1244884 .. 1244899 +  -2.6  -3.36327   GGCGACCACCGCCGA              GGAGAAC AGC GTT-TCC              TTGTCGGTGAAGTGG  45 457
LOY45_RS05665 NONE
LOY45_RS05670 1249495 .. 1249512 + -12.7  -3.53012   GGCCTTGCCGGCGAT             GGGCTGC GCAA GCAGCCC              TTTGGAGCGAGAGGC  79 71
LOY45_RS05690 1253696 .. 1253724 + -19.6  -4.07568   GCCCACAAGCGAAAA       GGCCCGCCGCCGG ACAA CCGG-GGCGGGCC        TTTTCGAAGAAGCAA 100 68
        tcdA 1260217 .. 1260228 +  -5.8  -3.53811   GCTGCTCGGCCACCA                GCCA GACC TGGC                 TTTCGCAGCCATGAA  55 246
LOY45_RS05740 1265006 .. 1265024 +  -4.4   -3.9941   TCTGTGGGAGCGGGC             TTGCCCCG CGA TGGGGCCG             TTTACTTCTGCAAGA  59 73
        rpsB 1270868 .. 1270882 + -12.8  -4.59853   CTCGGCACGCGAAAA               GGGGGC TTT GCCCCC               TTTTTGCCACCTTGA  95 62
         tsf 1271915 .. 1271942 +   -17  -3.85698   CTCTGTCGCCCCGAA        GAGGCTGCCCGC TCAC GCGCGCAGCCTC         TTTGTCAAAGCGGGA 100 52
        pyrH NONE
         frr NONE
        uppS NONE
LOY45_RS05785 NONE
        ispC 1276130 .. 1276185 +    -7  -2.70932   GGACAATGGTTGGCT C-ATCA-CGGTCGCTGAGGCCTGGCGCA TCAG TGCGTCAGGCC-CGGTG-CCGCTGAACG TCATTCGGAGAAAGA  50 11
        rseP 1277570 .. 1277597 +   -12    -4.183   AGCTTCGCTCAATTG        CGAACCTGCCGCG TCC CGCGGTGGG-TCG        TTTATTGCCAGTTGG  87 41
        bamA 1279962 .. 1279987 + -13.3  -3.14132   GTTCCAATTCTCTCT         GGGTCAGACCT TCTA AGGTCTGCCCC          TTGCTAACGACAACG  78 10
LOY45_RS05805 NONE
        lpxD 1281639 .. 1281665 + -14.5  -2.57501   CTTTGATTTGCTAAA        GGAGCGCCGTGT GAAA AC-CGGCGCTCC         CTATCTTTACTACAG  78 81
        fabZ NONE
        lpxA 1282891 .. 1282904 +  -5.2  -2.62263   TCCAGAACTCCACTC               GCGG CATCAC CCGC                TGATATGGCCGAGCT  46 9
        lpxB NONE
        rnhB 1284723 .. 1284748 + -16.2  -4.35644   GGCTGTTGTTTTGAT         CAAGGCCCGG TACAAT CCGGGCCTTG          TTGTTTTGTGCTGCT 100 82
        dnaE NONE
LOY45_RS05840 1289362 .. 1289410 +  -8.8  -3.53012   ACAATCGCGGGTCAA GCCCGCTCCCACAGGAATTGG ATTCACTG CCTGA-CCTGTGGGAGCTGGC TTTGCCAGCGAACGA  66 45
        tilS 1290984 .. 1290997 +  -5.2  -3.53761   CCTTCGCTTTCCCCG               GCGG CACTGA CCGC                TTTAACGCAGACTTC  54 257
LOY45_RS05850 NONE
        kdsA 1293536 .. 1293557 + -12.3  -3.00525   GTACCCCCCGTTCAA           CCTCTGACC CTCG GGTCAGGGG            TCTGCTTTCGCCGGG  73 60
         eno 1295035 .. 1295052 + -12.7  -3.16564   GTGTCTGAACACAAA             GCCTGGC TTCG GCCAGGC              TTCGTGCCATCAGCG  75 116
        ftsB NONE
        ispD 1296316 .. 1296359 +  -5.9  -3.66803   GCCCACACCGCTGTA TTCGGCG-GCTGATGCCCCT CAAGC AGCGACACCAGCGCGCCGCA TTTGAGGTGTTCGAG  57 253
LOY45_RS05880 NONE
        fghA 1299223 .. 1299243 + -12.6  -5.65177   AAGCAGGTAGAATCA            CGCCCTGA CTCAA TCAGGGCG            TTTTTTTATGCGTAT 100 69
        ispF NONE
        truD NONE
        surE NONE
LOY45_RS05905 1302188 .. 1302199 +  -3.6  -5.81412   CTGACCGGGCCACTG                GCCT GACC GGGC                 TTTTTTTTCGCTCGG 100 20
LOY45_RS05910 1303312 .. 1303350 +  -7.3  -2.53263   CGCGTAGAGGGGACA   GGCTCCAGCGCTGCCAA GGATA TAGGCGTCGCTTGAGTC   TGAGTTCGAACTCAG  53 63
        rpoS 1304415 .. 1304434 +   -15  -4.70659   TATCGTTGTGAAGAG            CGCCCCGA CAAG TCGGGGCG             TTTTTGCATCTGCAG 100 49
LOY45_RS05930 1308882 .. 1308895 +  -9.5  -5.81032   TGTTTCTTTTGAAAA               CCCGC TTTG GCGGG                TTTTTTTTCGCCTTC 100 47
LOY45_RS05935 1309860 .. 1309884 + -11.5  -5.00616   CTATGTTAGGGGGAC          GGATGCCCA TGGATGT TGGGCATCC          TTTTTTGCAGCAAAA 100 209
LOY45_RS05940 1310498 .. 1310521 + -13.2  -4.81752   TTACAACAGCTTCGA          TGAACCCGCC TTAT GGCGGGTTTA           TTTTTGCCTGTTTTT 100 64
LOY45_RS05945 NONE
LOY45_RS05950 1311662 .. 1311678 + -10.8  -5.03314   AAACACTGAAAACCA              GCCCGC CCACT GCGGGC              TTTTTTACGCCTGGA 100 32
LOY45_RS05955 NONE
LOY45_RS05960 1312903 .. 1312915 +  -3.3  -2.79183   TGTGACGCGAGGAAG                CTGAC ATG GACAG                TCTGCTCCCGCTCAA  41 22
LOY45_RS05965 NONE
LOY45_RS05970 1315329 .. 1315342 +  -4.5  -2.75577   AGGCGATGCTGGGGT               CAGCC ATGA GGTTG                TAGATTTTGGCATGC  44 186
LOY45_RS05975 NONE
LOY45_RS05980 1316293 .. 1316310 +  -9.8  -5.18726   CCCAAATCCAATAAA             GCCCCG CACCGC CGGGGC              TTTTTCTTATCCGCA 100 27
LOY45_RS05985 1317533 .. 1317543 +  -2.4  -3.53444   GTTGACCGAAGTCCT                 CGAC CAA GCCG                 TTTAAGGAGCAATAA  46 10
LOY45_RS05990 NONE
LOY45_RS05995 1318454 .. 1318474 +  -8.3  -2.82015   CCGCTGAAATCATGA            CCATGTCGT TCA GCGATATGG            TCTGGTGGCTCTCGG  57 97
LOY45_RS06000 NONE
LOY45_RS06005 NONE
LOY45_RS06010 1321643 .. 1321669 + -19.5  -4.37886   ACTTGCGTACAACCA         GCAGACCCCGC TTCGT GCGGGGTCTGC         TTTTCTGGAGCATGA 100 49
LOY45_RS06015 NONE
LOY45_RS06020 NONE
LOY45_RS06025 1323788 .. 1323804 +  -7.9  -4.49958   GTACGTGCGCGGGCT              GGTGCGC TGA GCGCACA              TTTATTTAATGACGT  77 16
LOY45_RS06030 NONE
LOY45_RS06035 NONE
LOY45_RS06040 NONE
        recA NONE
        recX 1328188 .. 1328218 +  -4.6  -3.26471   CATGCGGATCACAAA       CTGGTTCTTCAGCC AGC GGCTGGAGTGGTAG       TTACTGTAGAACTGG  49 318
LOY45_RS06060 1329901 .. 1329918 +  -9.1  -2.90571   CTTCGTTGATCGCCC             GCGGCGT GCCC ACGCTGC              TCTGCTTGGCAACTT  58 312
LOY45_RS06070 1331188 .. 1331198 +  -2.4  -2.69348   GTAGCCTCGAGTTGC                 CCGC CAG GCGC                 CTATTCTTCCTTCCT  38 230
LOY45_RS06075 1331888 .. 1331912 +  -2.7   -5.0133   GGAATCGGTTTCAGC          CAGTTAAGGCC ATT GGCCTTCACGC          TTTTTTAACCCGATC  77 19
LOY45_RS06080 1332417 .. 1332437 +  -7.6  -3.30124   AGAAACTCGCGCATG            GCGGAAGT CTGGT ACTTCTGC            TTGTGCCAGATGAAG  58 107
         fpr 1334180 .. 1334195 + -10.4    -5.626   TGAAAACAAAAAAAA              GCAGGC TTCG GCCTGC               TTTTTTTGTGCCCTA 100 48
LOY45_RS06120 1340417 .. 1340432 + -11.8  -3.10715   TGACAGCTTGCAGCT              GCGCGC CGGG GCGCGC               TTCAATCCTGCTCGG  74 114
        dinB 1346293 .. 1346331 +    -3   -3.9461   CAGCTCCGGATCGTT   GCGGGTCAGCTCGATCAG GCT CTGCTCCAGTTCACTGGC   TTCTTCTTCCAGGCC  58 155
LOY45_RS06165 1351099 .. 1351111 +  -5.5  -2.75064   GGAGTATCCTGCTGG                CTGTG GCT CACGG                TGGTTGCGTGGGCGA  47 224
LOY45_RS06170 NONE
LOY45_RS06175 1351810 .. 1351836 + -10.9  -5.63517   CGGGGCGTAAAAAAA        CCGCGATGGGCA GTGA TGCC-GTCGCGG         TTTTTTGTTTCAGCC 100 44
LOY45_RS06185 1353242 .. 1353270 + -13.2   -4.4078   CGCGCGTTGTTTGAA        TGCCCGAGCTTC TATAT GAGGTTCGGGCA        TTTTAGTTGGCACGG  95 54
LOY45_RS06190 1353849 .. 1353860 +  -5.8  -2.70932   CTTTACTGCCTGAAC                CAGC CCGC GCTG                 TGGTTAACGAGACAC  48 88
LOY45_RS06195 1354081 .. 1354098 +    -4  -2.60244   AAAAAGAACCTGGCA             GGCGGC GACAAG GCCGAC              TGAGTTGATTGCACC  42 5
        aspS 1355981 .. 1356002 + -15.9  -3.75153   AGTAAGCAGACCCCG           GGCGCATCC ATAT GGATGCGCC            TTTGCGTTAAGGCGC 100 36
LOY45_RS06205 1356931 .. 1356985 + -19.2   -4.8048   CCCGCTCCTGCCGGC CCGAGGCCGGATCTGCCTGCAGTTGC ATT GCACCTGCGAGCCGGTCCGGCTTCTG TTTTTACTATGGCGC 100 118
        ruvC 1357565 .. 1357586 +  -3.7   -3.9344   AACAAATTTTGCCCG           GGCAAT-GCC TTC GGCCATTGCA           TTTGCTGTTAGGGTT  58 57
        ruvA NONE
        ruvB NONE
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA 1362144 .. 1362154 +  -3.2  -2.74269   TTAACCTTCTTCGAG                 GACT GCT GGTC                 GTTCTCTGCTGTGCA  41 41
        tolB NONE
         pal NONE
        ybgF 1364828 .. 1364844 + -10.8  -5.27477   TCGCTTTAAAAGAAA              CCCGCG CTAGT CGCGGG              TTTTTTCGTTAGAAT 100 46
        queE NONE
        queC 1366319 .. 1366344 +  -3.4  -3.29144   TATTTTGCGATGGGG         TGTTGATTTC CTGTTA GAAATCAGTA          TTATACGCGCCATCC  46 43
LOY45_RS06270 1366455 .. 1366480 + -16.1  -5.07011   ACGCTGTAAGAAAAA         GCCCGCGTCCT GCAA AGGTCGCGGGC          TTTTTCGTTTCTGTG 100 42
LOY45_RS06280 NONE
LOY45_RS06285 1370997 .. 1371014 +  -6.9  -3.65902   AAGATTCCAGGCTTG             CACCGCG ACCG CGCAGTG              TTTCGGTCAGATCGC  59 442
LOY45_RS06295 1372501 .. 1372522 +  -6.5  -2.56596   GTGATCACCAACGTC           CCGCCGGCCA GCA TGGC-GCCGG           TCAGTTGCTCGCCCA  50 76
LOY45_RS06305 NONE
LOY45_RS06310 1375053 .. 1375065 + -10.5  -2.52464   CCCGCTGAGCGTGTT                GCCGG CGG CCGGC                TGAGTTAGCCCAGCA  64 10
LOY45_RS06330 NONE
LOY45_RS06335 NONE
LOY45_RS06340 1382430 .. 1382457 + -20.6  -3.64703   CAGGCGGTTGATGTT        CAGGCCCGGGGC GCCC GCCCCGGGCTTG         TTTCACTAAAAAAAC 100 30
        nadA 1384175 .. 1384208 + -13.1  -3.76482   GTACAGGCCACGCAT     CCGCTCGACCCGTTGC TGG GCATCGGG-CAAGCGG     TTGTTGGTGATGTCG  84 490
LOY45_RS06355 NONE
LOY45_RS06360 1387157 .. 1387192 +  -8.4  -2.75481   TCGGTGGTGCAGCCC    GG-GGTGCTGTCCTT GGGATAG AAGTACAGCACCACC    TGCTTGCCCTTGAGC  53 475
        dapA NONE
        bamC 1390106 .. 1390121 +  -3.2  -3.07994   GCGTGCTGAGCGTGA              TTCAGG ACAA CCTGGG               TTAAGTGCGCTTCGC  43 6
LOY45_RS06385 NONE
LOY45_RS06390 1391641 .. 1391656 +  -4.6  -2.89655   GCAAATTCACGCAAG              CGCCTG ATAC CACGCG               AATTTTTTTCGCAAA  46 44
LOY45_RS06395 1391810 .. 1391849 + -17.2  -3.63895   TCTCTCCGCCATACA  AGAGAAAGCCCCCTGACC GAAA GGTCCGGGGGCTTTTTCG   TTTCCGCTGATTGAG 100 30
LOY45_RS06400 NONE
LOY45_RS06405 NONE
LOY45_RS06410 NONE
LOY45_RS06415 1396827 .. 1396837 +  -2.4  -3.34344   GCCCTGGCGGGGTAA                 CGGC GCA GCGG                 TTGGTTCAAGCATCC  44 26
LOY45_RS06420 1397983 .. 1398013 +  -3.3  -3.53012   TGCAGCCTGGCCACC      TCGTCG-GCGCT CATGCCGC GGCGCATGACGA       TTTGCGACAGGAGGA  49 243
LOY45_RS06430 1400303 .. 1400334 +   -13  -4.77567   CTTCAGGCGTTCCTT      GCGCAGCCGGGTGAC CGT GTCA-TCGGCGGCGC      TTTTGTTCTCGGCAT 100 158
LOY45_RS06440 1401009 .. 1401035 +  -9.4  -4.56775   CACGTCTTTTAAATA         GACGCCAGCCGA CTA TTTGTTGGCGTC         TTTTTCACAAAAAAT  83 69
         rnd NONE
LOY45_RS06455 1404312 .. 1404330 +  -8.8  -2.81291   CCCTTTCGCTGTAGT             GCCGCC CTCCGCT GGCGGC             CTTTGCCGTTATCCA  60 44
LOY45_RS06460 1405666 .. 1405693 +  -7.8  -2.74523   CACAGGGCCGGAGTT        TCTTCACTTGCAC CCG GTGCA-GTGAAGC        TGGTCTTGGAAATGA  51 399
LOY45_RS06470 1406590 .. 1406600 +  -2.4  -3.53012   GCCGCCCAGGCTTGT                 CGGG TAT CGCG                 TTTGGGGGAACAAGG  46 41
LOY45_RS06475 1407930 .. 1407948 +  -3.1  -4.08394   TTGAGTGCTTGCAGC            TCG-GCGC CGCT GCGTTCGA             TTTTGGCGCGGATGT  60 110
LOY45_RS06495 1409993 .. 1410021 +  -3.8  -3.65522   ACGGGTCGAACAGGC        CGCAATCCATGA GCATG TCGCGGATTTCG        TTGTTGAGGTGGGTG  53 441
LOY45_RS06510 1412781 .. 1412796 +  -7.5  -2.91681   TGGGCGGCAGCGGCA              CGCGG GTCGAG CCGCG               TCTGTAGGATTGCCC  56 3
LOY45_RS06515 NONE
LOY45_RS06520 1414390 .. 1414437 +  -9.1  -2.52516   CCACCGAGTTCACGC AGTTCAGCC-GTGGCGCGCCGA CGCCT TCGGCCTGCAACAGGCTGAGCA CTTCCTGGTGGGGCC  55 282
LOY45_RS06530 NONE
LOY45_RS06535 NONE
        pxpB 1417935 .. 1417954 +  -3.4  -3.35679   GACGATACCCCGCTG            GAGGCACA GGCA TGAGCCGC             TTGTCGATCGAGGCC  46 11
LOY45_RS06545 1418940 .. 1418959 +  -7.8  -3.00298   CGGCCTTGCCGGCGA            TGGGG-CGC GTA GCGGCCCCG            TGTCTACTTGGACAA  56 99
        cysK 1423389 .. 1423419 + -10.2    -2.604   TCCTTGACACTGAAT       CCCGGCCCCGCAGG TTT TCACCGGGGCCGGA       TCGGTTAATATGTTC  64 94
LOY45_RS06570 1424493 .. 1424511 + -14.6  -2.94099   TTCACCACCGACTTG             CCAGCCTG AAA CAGGCTGG             TCTATAGTCACCCCA  80 101
LOY45_RS06575 1425842 .. 1425861 +  -5.7  -3.61715   CCGTGCCGTTCTCGG            CGCC-ACC GAAGG GGTTGGCG            TTCTTCGCCCAGGTG  57 157
        aceK 1446300 .. 1446316 + -13.7  -3.01712   TGGCTTGCTAGCGAT              CGAGCGC GAA GCGCTCG              TATTCCAGGCGCCGC  77 54
LOY45_RS06690 1448274 .. 1448288 +  -2.8  -4.08767   CAGACTTGCTTGAAG               CCTG CGAAATT CAGG               TTTTCACCGCCTGGG  58 42
LOY45_RS06700 1449355 .. 1449373 +  -7.3  -3.02144   CACCGTCGCGGTAAA             GGCGCCG AACCG CTGCGCC             TGTTCCAGCCGATAG  54 127
LOY45_RS06710 1451193 .. 1451218 + -13.3  -2.69151   GTGTGCAGGGTAGGA         CGACGGCCATC CTCG GGTGGCCGTTG          TGCTATCTGCAGCAA  75 45
LOY45_RS06715 NONE
         def 1453078 .. 1453100 +  -6.8  -2.75064   GGCGCGACGAACAAC           CCGGTCAGCC AAT GGCCGCCTGG           TACTTGGCTCAGGCA  48 248
LOY45_RS06730 1453855 .. 1453873 +  -7.4  -5.03994   TGAGCTAGGGTGAAT             CGTGTCCA GGG TGGACAGG             TTTTTCTATCTCACA  88 78
LOY45_RS06735 1454858 .. 1454870 +  -7.7  -3.14211   CGACCCTGGCAATCA                GGCTT TCG AAGCC                TTCGTCGCCGCCGAT  55 352
LOY45_RS06755 1458722 .. 1458742 +  -5.5  -4.13767   AAGCATTGGAAAAAG            TGCTATC TTATTTT GATAGCA            TTTTCCGATGAACAA  64 55
LOY45_RS06760 NONE
LOY45_RS06765 NONE
LOY45_RS06770 1460243 .. 1460260 +  -9.1  -4.25104   CCGCAATAAGGCCAA             GAGCTCC GCAA GGGGCTC              TTTTCGTCCGGGGCA  79 194
LOY45_RS06775 1460911 .. 1460928 +  -3.3   -3.9074   TGGCCCGATTACCCG             CTGGAGG ACCA CCGTCAG              TCTTTTCTGGTTCTT  56 78
LOY45_RS06780 1461535 .. 1461546 +  -2.2  -3.86524   AACCCCGAGAGTTAT                GC-CG AAT CGCGC                TTTCTAAGGCGGTGT  51 47
LOY45_RS06785 NONE
LOY45_RS06790 NONE
LOY45_RS06795 1463712 .. 1463733 +  -7.9  -2.50699   GCCGATGGTGATCGG           CGGCGGGCT GACC AGCTCGACG            GTCTGTTGCTTGCGC  53 47
       fadD2 1467118 .. 1467136 +  -2.3  -3.81062   GCTATCGCGGGGCAA             GCCCGCT CCAAC AGTGTGC             TTTAGAATTTTTACT  51 102
       fadD1 1469463 .. 1469509 +  -9.4  -2.70932   GAAACGTGCGCTCGA TGCACGGGCGCAGTTCACCGG CGATAT CCCGTGAATCGCGCCCG-GAA TAGTTGGCACCACCG  56 443
        hrpA 1476297 .. 1476311 +  -3.5  -2.72344   AGCACTGCGCAGTGG              CCC-GG CAAG CCAGGG               TCATTGCCAGTCAAA  42 123
LOY45_RS06840 1477546 .. 1477567 +  -6.6  -3.10908   TCAGTTGCTTACGAA           GTGTCCTA CTGTGC TGGGACAC            TTGGCTGATGGCTTT  54 44
LOY45_RS06845 NONE
LOY45_RS06850 1478609 .. 1478628 +  -5.6  -5.06103   GATTCCTCCCCAGCA            CAAGTGGC CTGA GCCGCGTG             TTTTTTCAACATTAT  84 160
LOY45_RS06855 1480018 .. 1480035 + -14.1  -5.44119   TCCGTTAGATCTTCA             GCCCCGC TTGC GCGGGGC              TTTTTTTCGCCTGCG 100 57
LOY45_RS06860 1481219 .. 1481245 + -16.6  -2.52543   TCGCGGGGCAAGCCC         GCTCCCACACTG GTC CTGTGTGGGAGC         TGGCTTGCCAGCGAT  85 49
LOY45_RS06885 NONE
LOY45_RS06890 1486600 .. 1486629 + -14.4  -5.33785   CCTTTGGGTGTACCT       GCCCGGTCACTGC CTTGT GCA-TGACCGGGC       TTTTTTATGGTGATT 100 77
LOY45_RS06895 1487962 .. 1487984 +  -7.7  -3.21099   TCAGATAAGCCAGGG           CATAGGCAC GGAAG GTGCCGATG           TTGGTCATCCGGCGA  57 265
LOY45_RS06905 1490462 .. 1490495 + -12.6  -2.52543   TCGCCGGCAAGGCCG     GCTCCCAC-AGGTTT TCTAC AGACCTTGTGGGAGC     TGGCTTGCCAGCGAT  72 53
LOY45_RS06915 NONE
LOY45_RS06920 1492624 .. 1492641 +  -2.7  -3.31415   GAACTGGCGGTCAGT             GCTTGAT CAAG ATCAAAC              TTGGCTTTGGTCGTA  46 299
LOY45_RS06930 1493098 .. 1493118 +  -6.8  -3.61178   GGTCATGCTGGTGAT           CGCCGCCGC AGTG GTGGC-GCG            TTTCCAGTAGATGGC  59 245
LOY45_RS06945 NONE
LOY45_RS06950 1498241 .. 1498258 +  -2.6  -5.02074   AAGCTTTATCGTCTC             TCCCAC AGGGAA GTGGGC              TTTTTTCGGGACTGC  75 40
LOY45_RS06955 1499006 .. 1499056 +  -5.3  -2.52464   GCCGGCGATGGGCTG CGTACAGA-GCAGCCCTCGAACGC TTCA GCGTTCGCGCATCGCCTCGGTACG TGCCTTGAGCACCGG  46 126
LOY45_RS06975 1513187 .. 1513210 + -14.6  -2.87132   ATCGCTGGCAAGCCA          GCTCCCACAG AGAT CTGTGGGGGC           TGTCTCAGGACGGGC  79 133
        recQ 1516650 .. 1516660 +    -4  -3.44794   GTCATGGTTAGCTGA                 CTAA TAA TTAG                 TTCTGATAATGAGTT  50 113
LOY45_RS06995 1517122 .. 1517161 +  -4.5  -3.42503   AAGTCCTGATCACCC TCAGAAGGTG-TG-ACC GAGATTGA GGTACAACGCCTTCTGA  TTCTCGCTGTTGGCC  52 32
LOY45_RS07005 1520039 .. 1520057 +  -8.1  -3.18264   CTGCACCGCCGGAAT            CCGC-CCG GAGC CGGCGCGG             TTGGTCAATGACAGC  57 398
LOY45_RS07020 1522728 .. 1522758 +    -9  -3.53811   ACTACATATTCCTCA      TCGCG-CCCGTCGC GCCAG GCG-CGGGTCGCGG      TTTGCAGGGAGTGGC  62 381
LOY45_RS07035 1524815 .. 1524830 +  -4.7  -3.13403   GAACGAGAAGGTCAG              GATCG AACGCA CGATC               TCTTCATCGAGACGG  47 252
LOY45_RS07045 1526693 .. 1526740 +  -9.9  -3.53811   CCTACCGCCGGCAAG GCCGGCTTCCACAGTGGACCTGT GTGC ACCGGA-C-CTGTGGGAGCTGGC TTTGCCAGCGATGGG  70 64
LOY45_RS07080 NONE
LOY45_RS07085 NONE
LOY45_RS07090 NONE
        scpB 1534033 .. 1534058 +  -3.1  -4.24002   GCGCGAGTAACTTCA         GCCGCTGGGCGC GAA GCGCC-GGCAAC         TTTTACAATTTCGGC  61 31
LOY45_RS07100 1535322 .. 1535339 + -11.3  -5.40474   TCGGGTGGGGTAGGA             GCCAACC TTCG GGTTGGC              TTTTTTTGCCCGAAT 100 42
LOY45_RS07105 1537371 .. 1537389 + -17.4  -5.27938   CCCGGTTGAAAAAAA             CGCCCCGC TCT GCGGGGCG             TTTTTGTTTACAGGT 100 45
LOY45_RS07140 1544805 .. 1544827 +  -2.7  -2.77781   ATGCACGACGCGAAA           GGTAGTGGC GCATA GCTATTATC           TCAATTTTCCTACGA  41 11
        arfB 1545985 .. 1546013 +  -2.2  -3.64487   CGCCAATGAAACAGG       CGCCGAACAG-GC TCAG GCACAGGGCGGCG        TTGTTCCAGCTGTGG  50 450
LOY45_RS07175 1551423 .. 1551438 +  -7.6  -2.78018   ATGGTGTTGGCAAGT              CGGATT AATT AATCCG               TCGTTAATAAAGCAT  54 18
         acs 1554293 .. 1554319 + -17.3   -4.0174   ATGTGTTACTCAAAT        GCCCCGTCCGGC ATCT GCCGG-CGGGGC         TTTGTGCATTCTGTT 100 136
LOY45_RS07190 1555566 .. 1555600 + -12.2   -5.1675   GTTTCACCTGTTCAA     TGGTGCAAGCAGCAGA GAC TCTGAGGTTTGCACCA     TTTTTTCATCCCTAA 100 50
LOY45_RS07195 NONE
LOY45_RS07200 1557014 .. 1557028 +  -2.1  -3.35542   GCGCCGCGCAAGCAC              TGAGGC CTGC GCC-CA               CTTTTTCGCCCTGAG  44 23
LOY45_RS07205 1557833 .. 1557854 +  -2.2  -3.04517   CAACAGTTCCTTTCG           GGCAGCCT GAAGTA AGATTGCC            GTTTTGCACCAAAAT  41 11
        argR 1559189 .. 1559211 +  -6.8  -3.36273   TTACAATCCCCCCAT           CGCTCGCCAG TTC CAGGCAGGCG           TTCCTCTTCAGGAGA  56 288
LOY45_RS07215 1560507 .. 1560532 + -11.1  -5.27335   TGAAACCGAATTCCA         GAGCAGGTGCC TGCG GGCGCCTGCTG          TTTTTCTTTGAGCCG 100 80
        aruF 1561580 .. 1561599 +  -4.8  -3.76402   CGTCGGTGAAGGCGC            CAGCGTCC GTCT GGTCGCGG             TTTGATCCCTGCGGT  57 1
        astA NONE
        astD 1564190 .. 1564200 +  -5.4  -3.63266   TCCACGGAGCCTTGC                 CGAT GAA ATCG                 TTTGAAGTGAATTTT  56 48
        astB NONE
LOY45_RS07240 NONE
        astE 1567120 .. 1567131 +  -3.6  -3.57263   GCACAGCCGAGAACA                CCGG CACC TCGG                 TTTCCAGCTGCACCT  51 281
        alaS 1570669 .. 1570709 +  -7.6  -2.89874   GAGCAGGGCGTTTAA GGCGTACATCGGCCCGCCGT CTA GTGGTGGGCC-ATG-GCGTC GTTTGAATGTTTATT  56 26
LOY45_RS07260 1572004 .. 1572032 + -15.9  -4.88736   GTAAGGCGGCTGCCT        CTGGGGGCGCGGC TTG GCCGCGCCCTTCG        TTTTTCTGGCTGGTG 100 37
        csrA 1572379 .. 1572393 +  -2.2  -2.71712   TAATTTTTATCGAGT               TTTTTT CAA AAAAGA               GTTTGCAAACGGGGA  38 38
LOY45_RS07270 NONE
LOY45_RS07275 NONE
LOY45_RS07280 1572878 .. 1572900 +  -7.8  -3.70902   GCACCATACATCAAA           GCAGTTTTCA GTT TGAAAGTTGC           TTTAGCTGTAACCAG  67 35
LOY45_RS07285 1573033 .. 1573052 +   -15  -4.98531   ACCATACAACAGAAA            GCCCGCCT ACCA AGGCGGGC             TTTTTGCTTTCCGGC 100 37
        mgtE 1574873 .. 1574890 + -11.3  -6.11644   CATCGGACAAAAAAA             CACCCCT CGCG AGGGGTG              TTTTTTTTTGCCTGG 100 46
LOY45_RS07305 1579558 .. 1579570 +  -4.1  -2.78935   AGATCGCTGAGCAGT                TCGAG CAG TTCGA                TCTGGTGGGCGATGT  43 272
        fepB NONE
LOY45_RS07320 NONE
LOY45_RS07325 1583272 .. 1583293 + -14.5  -3.14963   CGAGGTAATAAAAAA           GGCCAATGC GTGA GCATTGGCC            TTGAGTGATTGTGCC  81 42
LOY45_RS07335 NONE
        phnN 1584798 .. 1584820 +  -5.4   -3.1582   GGGCATACTCCGCAA           AGGTGAGGGC TGA GCCCTAGCCA           CTTTTCATGAAATAG  50 242
LOY45_RS07350 1585234 .. 1585257 +  -9.6  -5.63103   AGGAATAAATAAAGC          CCCTTTCAGA ATCA TCTGGAGGGG           TTTTTTTCATTAAGG 100 107
LOY45_RS07355 1585990 .. 1586006 +  -5.7  -5.00616   GCCACCGGGAATGTG              GTCGCGC CAG GCGCGGA              TTTTTTCGGCCAGGC  87 360
LOY45_RS07370 1588860 .. 1588881 +  -6.5  -3.21099   TTCGGCGGCGGCCGC           CTCGGCCACG CCA CG-GGTCGGG           TTGATGGTCAGCGGC  54 508
LOY45_RS07380 1590278 .. 1590308 +  -8.3  -2.71011   AGTGCCGCTTCCTGT      ACCGC-CTCACCCA GGGT TGGGTGAGCGTGGA       TGGTTCCCGCCACAT  53 127
        bkdR 1595852 .. 1595873 +  -3.7  -2.88579   CGCTGCCGGCCAATG           GCCTGACCCT GCC AGGCT-AGGC           TGTGTAGAAAATTAC  43 6
LOY45_RS07410 1597373 .. 1597410 + -12.1  -5.60993   CGGACAATTCAAAAG   CAGGTGGCAGACATT CTTCGATA AGCGTCTGCCACCTG    TTTTTTTATGCCAGC 100 68
LOY45_RS07415 1599120 .. 1599136 +  -7.9  -4.26076   GGGACAACCCCAGTG              GTGCGCC GGT GGCGAAC              TTTTCGTAGACCTGG  75 306
LOY45_RS07440 1602508 .. 1602551 +  -3.6  -3.53091   GATCGGATCAAGGCC ACGCACTAACGGCCAGGAGC GTTC GCTCCTGGCGGTACATACGA TTTAAGAGGCGGCAT  50 17
        cheR 1603417 .. 1603452 + -15.4    -4.128   GGTTCATGCATGCAG    CAAGGCCGGCATCGCC ATCA GTGGGTGCCGGCCTTG     TTTGTGTCTGCAGGT 100 46
        flgB NONE
        flgC NONE
        flgD NONE
        flgE 1608897 .. 1608918 + -10.9  -3.27704   TAATCGGTGTGAGCG           GACCCCTTT CTCG GAAGGGGTC            TTGCATTTCAGAGGT  70 54
LOY45_RS07475 1609219 .. 1609231 +  -6.2  -4.59853   ACCCCTTGTCTTTCG                GGCG TTTTC CGCC                TTTTTCAAAAGTTGG  75 115
LOY45_RS07480 NONE
        flgG NONE
        flgH NONE
LOY45_RS07495 NONE
        flgJ NONE
        flgK NONE
LOY45_RS07510 1617637 .. 1617673 + -22.5  -2.60714   CATCTTCGCACTCTA    CCTTCGGGTGATGCC CAGTGCC GGCATCACCCGAAGG    CTTCTCCAGGTTTGC 100 43
LOY45_RS07515 1621269 .. 1621284 +  -4.6  -2.70932   GATTAACGACAATGG              CCGGCA ATTC TGCCAG               TCGTTGACAGAACAA  43 35
LOY45_RS07520 1624132 .. 1624150 +  -9.5  -4.87893   GCAGGCAAAACGAAA             GCCGGGT GTGAA GCCCGGC             TTTTTCGTTGCGATT 100 40
LOY45_RS07525 NONE
LOY45_RS07530 NONE
LOY45_RS07535 1626916 .. 1626930 +  -2.8  -4.18018   ACTGATCGGTGGGTA               TTTGTC GCT GGCAGA               TTTTGCCTGAGCCGA  58 1
        rffA NONE
LOY45_RS07545 1631697 .. 1631709 +  -6.9  -3.21747   AGCAGTGGCGCAACG                CCTGG CTG CCGGG                TTGATCCTGCGATAA  56 9
LOY45_RS07550 1632923 .. 1632947 + -15.7  -5.64274   CTTGCCGTTTAAAAA          GCGCTGCCGGT TGC ACCGGTGGCGC          TTTTTTTATGCCTGC 100 49
LOY45_RS07555 1634021 .. 1634053 + -16.3  -4.27316   CACCTGGTAGTTGTC      GGCGGGGGAGTGC ATCTATG GCGCTCCTCCGCC      TTTTGCATTGAGAGG 100 42
LOY45_RS07560 1634444 .. 1634462 +  -2.3  -3.11634   TGCCAAGGCCTGAAG             TTGGCGG CTGAA CCGCAAG             TTCGCTAGTCTGGCA  42 28
        fliD 1635938 .. 1635968 + -13.3  -4.72272   ACCGATGTGCCAGAA      GCCCGGCAGTACCC GTAA GGGGACT-CCGGGC       TTTTTGCTGGCCGCG 100 44
        fliS NONE
LOY45_RS07575 NONE
        fleQ 1638482 .. 1638498 +  -6.5  -3.49475   GCTGTAACGCCCGTC              CTGGCGG CCT TTGCCAG              TTCTCTGCAGCTCCA  58 107
LOY45_RS07585 NONE
LOY45_RS07590 1641311 .. 1641323 +  -3.3  -3.21807   GTCGGAGAGAGAAGT                CCATG AGC CAAGG                TGTTGAATTTAATCG  46 144
        fliE NONE
        fliF NONE
        fliG 1644455 .. 1644513 + -29.2  -3.92869   ATGATCTAAGACCTT --ATCGCGGGGCAAGCCCGCTCCCACAG AGGTC CTGTAGGAGCGGGCTTGCCCCGCGATGC TTTATGAGTGCGTGA 100 32
        fliH NONE
        fliI NONE
        fliJ NONE
LOY45_RS07625 NONE
LOY45_RS07630 NONE
LOY45_RS07635 1649610 .. 1649622 +  -5.5  -2.76736   TAAGTTCAAACCTGG                CGCGA GTT TTGCG                TAGTCTTCGCTAATT  47 44
LOY45_RS07640 1650940 .. 1650957 +  -3.3  -2.75382   GTTGTGGGCTCAAGC             GCCGTGG ATTA CTACGCC              TGATTGGCTGCGGTC  41 5
        fliL NONE
        fliM 1652552 .. 1652572 +   -14  -2.72344   GATTATCGATCCGAT            CGAGCGCC GCTGA GGCGCTCG            TGGTTCCAACTCCGA  78 13
        fliN 1653108 .. 1653118 +  -8.2  -2.99471   CAACAGCCTGGCCCT                 GGCC TGT GGCC                 TGTATGTAGACGTCG  58 58
        fliO NONE
        fliP NONE
        fliQ 1654549 .. 1654563 +  -2.7  -2.76263   TCCTGTCGTTGTACG               GCAGC ATTCC GCAGC               TGATTGGCTGATCCG  41 0
        fliR NONE
        flhB 1656577 .. 1656597 +  -2.5  -2.76696   GTCACTCAAACCACC            TCGTTCAAC AAA GTTGGAAGG            CTTCTTGCAAAGGCA  39 105
        flhA NONE
        flhF 1660157 .. 1660167 +  -3.2  -3.39449   GTACCTACATCAATG                 GTCT GCC AGGC                 ATTTTTCAGGTGTTG  48 64
        fleN NONE
        fliA NONE
LOY45_RS07705 NONE
LOY45_RS07710 1663078 .. 1663088 +  -3.2  -4.56597   GTCGACGATCTGCTG                 TCCA GTC TGGG                 TTTTTAGGGAGCACG  67 8
LOY45_RS07715 1665316 .. 1665331 +    -9  -4.02108   AGCATGCTCAAGCGT              TACGCC GCCC GGCGTA               TTTGATTCTGGTGGC  73 5
LOY45_RS07720 NONE
LOY45_RS07725 NONE
        motD NONE
LOY45_RS07735 NONE
LOY45_RS07740 1669869 .. 1669883 + -11.4  -4.09685   GACCGCACTGAGCAC               TCCGCC GAT GGCGGA               TTTTGAGGGATAGGG  86 58
LOY45_RS07745 NONE
LOY45_RS07750 1670845 .. 1670896 +    -8  -4.09864   GTGATCCAGTCACTG CCTG-GTGTGCTGGCTATACCGGC CTCATC GCTGGCA-AGCCAGCTCCCACAGG TTTTGCACAATCCCT  73 96
        ccmA 1673639 .. 1673650 +  -2.2  -4.10178   CCTGGGGCAGTGGGC                CGCA TGAG TGTG                 TTTGTACTGTTGTTG  56 19
        ccmB NONE
LOY45_RS07775 1675122 .. 1675132 +  -2.4  -3.71794   CTGGGTCGGGAGATG                 GCAC GAT GAGC                 TTTACCTCCTTCAGT  51 17
        ccmD NONE
        ccmE NONE
LOY45_RS07790 NONE
LOY45_RS07795 NONE
LOY45_RS07800 1678729 .. 1678742 +  -2.3  -2.98814   TTGCTGGACAAAGAA               CAGAC CCAT GACTG                ATTTCTGGCTTGCTG  41 11
        ccmI NONE
LOY45_RS07810 NONE
LOY45_RS07815 NONE
LOY45_RS07820 1682152 .. 1682164 +  -4.7  -3.57263   TCAGTGAATGCACCG                CGGGC AGG GCACG                TTTGACGCTGGCAAT  55 374
LOY45_RS07830 1683770 .. 1683780 +  -2.4  -2.87132   CAGGGCGCCAGCGAC                 AGCC TGA GGCA                 TGTGTGGGGGCGGGC  39 19
LOY45_RS07835 NONE
LOY45_RS07840 1685102 .. 1685112 +  -5.4  -3.13164   GCACACCTGCCCGAG                 CTGA TGC TCAG                 TTCAATGCTTCGAAC  50 22
LOY45_RS07855 NONE
LOY45_RS07860 1689117 .. 1689136 + -16.4   -4.7254   TCTTTGCTGGTGCAA            GGCCCCGC TCAG GCGGGGCC             TTTTTCATGCCGGCT 100 75
LOY45_RS07870 1691783 .. 1691818 +  -3.3  -3.00918   ATCTGGAGTGCGGTA   CCACCGGGGTTACTGCC GAGC GGCAG-AAGCA-GGTGG    ATTTCTCCTATGGCT  42 401
LOY45_RS07885 1694335 .. 1694374 +   -12  -3.28712   GTTGGCGGCCGCTTC  CGGCGGGTGCT-GGGCGGT GAT GCCGCCGGGGCTCTCGCCG  TTATCAGGGGCAAAG  71 375
LOY45_RS07935 1705079 .. 1705093 +  -3.4  -2.86432   AACGCTCCACCACTT               CCCGCT GCA GGCTGG               TCTGGTCGTATTCGC  41 396
LOY45_RS07960 1712204 .. 1712261 + -22.8  -3.50853   GGACCTTGTGTAGAC GCGGGCTTGCCCCGCGATAGCATTCTG TCAGC CATCGCGC-ATCGCGGGGCAAGCCCGC TTCTACTTGGCCAAC 100 28
LOY45_RS08020 1727087 .. 1727123 +    -3  -2.74012   CTGGCCGCGGTCGAT   CCAGGCCTGGATACA CTCGATGT TGTG-CCGGGCCTGC    TCGTTGAGCTGCTCG  40 332
LOY45_RS08030 1728636 .. 1728646 +  -8.2  -3.82208   TTGCCGGCGATCAAA                 GCCC GAA GGGC                 TTTGCCTCTTTGATC  69 109
        uraH 1736429 .. 1736447 +  -8.8  -5.83822   TCTTCGTAGGTCCTT             GCCCGC TCACACT GCGGGC             TTTTTTTTACCTGTG 100 57
LOY45_RS08080 1739169 .. 1739183 +    -7  -3.30771   AGTAGCACCCAATGT               CCGGCC ACT GGCAGG               TTATCCAGCCTCTGC  56 46
        aqpZ 1740434 .. 1740446 +  -9.1  -2.52516   GCCGAACCGGTTTCG                GCCAG GCG CTGGC                ATTCGTCGTCGCACA  55 473
LOY45_RS08110 NONE
         smc 1750675 .. 1750686 +  -5.8  -4.86385   CGCCACGTTTTAAAG                GGGT TTAA ACCC                 TTTATTTTTCAGCAT  82 180
        zipA 1751691 .. 1751708 + -11.3  -4.54727   CAGACATGCCCCAAA             GAGCAGC CACG GCTGCTC              TTTTGCTTTGCAAGA  95 113
        ligA NONE
LOY45_RS08130 1755294 .. 1755304 +  -3.2  -2.79302   GTCAACTGGCGCCGG                 TGGC ATA GCTA                 TGTAGTGCAGCTGCT  41 18
LOY45_RS08135 1760188 .. 1760213 + -13.3  -3.40522   ATGCCGTTACAATGG         CGCGGCTCGTC GCCA GATGAGCTGCG          TTATGGTGACCCCAT  82 177
         ffs 1760341 .. 1760358 +  -3.4  -3.91897   CCACCTATCTCTAAG             TCCTTG ATTCTA CAAGGG              TTTCTCGCTCAAAAA  56 44
LOY45_RS08145 NONE
LOY45_RS08150 NONE
LOY45_RS08155 1763008 .. 1763019 +  -5.8  -4.20868   GATGGTTTCCAATTT                GGCT CAGC AGCC                 TTCTTGTTTTCCAGC  70 480
LOY45_RS08170 1764673 .. 1764685 +  -7.7  -2.52464   AAAACCGCCATGACA                GCCAA TGC TTGGC                TGCATTGAGAACAGG  53 5
LOY45_RS08175 1765185 .. 1765200 +  -7.6  -4.42464   GGCGAATAATTAAGA              GCTTGA ATCC TCAAGC               TTTGTTTGGAGAGTT  77 32
        dnaX NONE
LOY45_RS08200 1772002 .. 1772019 + -12.7  -6.32216   TACGAGAATCAACAA             GCCAGGC CAAT GCCTGGC              TTTTTTTTTGTGTGT 100 43
        recR 1779394 .. 1779452 + -39.9  -2.65264   ATCCAGGCTCTTTAT TCGCGGGGCAAGCCCGCTCCCACAG AACCTCAGC CTGTGGGGGCGGGCTTGCCCCGCGA TGCTATCAATACTCG 100 40
LOY45_RS08315 1795836 .. 1795872 +  -7.9  -2.52543   ATCGCTGGCAAGCCA    GCTCCCACAAGTTGTTC ACC GCAATCCTTGTGGGAGC    TGGCTTGCCAGCGAT  53 60
LOY45_RS08330 NONE
LOY45_RS08335 1799142 .. 1799176 +  -5.7  -3.05596   TGCGTAGCTTCTGGC    GAGG-CGCCCTGGATG ACCA CATTCAGGCCCTCCTC     TTCGCTGCCGGAATA  49 306
LOY45_RS08345 1813065 .. 1813086 +  -2.9  -3.35679   GCCAAAGGCCAGGTG           CAGCCAG GACAACAG CGGGCTG            TTATCGATCAGCGGG  47 339
LOY45_RS08370 NONE
LOY45_RS08375 1818866 .. 1818880 +  -5.6  -4.56597   GAGTGGCTAAATCCT               CGCTGC GCT GAAGCG               TTTTTCAAGCGACAA  73 89
LOY45_RS08380 1820395 .. 1820415 + -13.9    -5.252   CCCAGGCATGTAAAA            GCCCGGGGC AGT GCACCGGGC            TTTTTTATGGCCCTC 100 45
LOY45_RS08390 1823182 .. 1823215 + -14.5  -3.68738   GATTCCTTGTGTTGG     GCCTGCTTTGCAGGC CATC GCCGGCAAGGCCGGC      TTGTGTCTTGAGGTA  86 39
LOY45_RS08395 1824661 .. 1824671 +  -8.2  -3.23692   TGGCCCTTTCGACAT                 CGGC AAA GCCG                 TTGATGATGCTGCTG  59 334
LOY45_RS08415 NONE
LOY45_RS08420 1830312 .. 1830334 +  -5.4  -2.76671   AGACCGCGTTTTCCC           GTCAGTCCTG AGC CTGGACCGGC           CTTTGCGCTGGGTAT  47 15
LOY45_RS08425 1831759 .. 1831785 + -15.1  -5.63517   TGCGGCCATTGAAAA         GCCCCCTGGCC ACTAC GGCGAGGGGGC         TTTTTTATTTACCGG 100 43
LOY45_RS08435 NONE
LOY45_RS08440 1835719 .. 1835772 + -33.4  -4.86621   TTCACTTATAAAAGA GCCCGGTCCGTTCGGGCTGTGCAGG CCAGC CTTGCACAGCCCGG-CGGACCGGGC TTTTTCATTCGGGCT 100 50
LOY45_RS08445 NONE
LOY45_RS08450 NONE
LOY45_RS08455 1837820 .. 1837842 + -10.5  -5.30686   TAATAGATGAAGAAA           CCCGGTGAG TGTCC CTCTCCGGG           TTTTTTATGGCTCTT 100 42
LOY45_RS08460 1840087 .. 1840097 +  -8.2  -3.75669   ACTGTGCCAGGAGTC                 CGCC TCG GGCG                 CTTTTTTCTAGGCTT  69 4
LOY45_RS08465 NONE
LOY45_RS08470 NONE
LOY45_RS08475 1841766 .. 1841783 + -12.7  -5.46698   GCGCGCAATAAAAAA             GGCTGCC CGAA GGCAGCC              TTTTTTCGTTTTCGG 100 131
        sdhC NONE
        sdhD 1844176 .. 1844195 +  -2.8  -2.50935   TTCGTCTGGGGTGTG            CAGATTCT CTGG GGTATCTG             ATTCATGGCTAACAT  39 5
        sdhA NONE
LOY45_RS08500 1846756 .. 1846778 +  -6.2   -4.2349   CAAGGTGAAACCCGA           GCTCGGGC CCACAAA GCCCAAGC           TTTTACCTATGAAGA  69 93
LOY45_RS08505 NONE
        odhB 1851045 .. 1851087 + -11.6   -2.5409   AGCAGTTGCAAGCTG CAAGCTTCAAGCGGCAAGCC TGAAC GGTTTGC-GCTTGAA-CTTG TGGCTTGCAGCTTAT  67 44
        lpdA 1852580 .. 1852603 +   -11  -3.09878   TTAAACAATAAGAAA          C-CACGGCGGG TGG CCCGTCGTGAG          TCTTGCGTGCATGAC  71 37
        sucC NONE
        sucD 1854810 .. 1854841 + -18.2  -3.72576   TCACTGCCCAGTAAA      CAAGAAAGGCCACC TTCG GGTGGCCTTTTTTG       TTTACTGGGCAGCAG 100 41
        brnQ 1856526 .. 1856551 + -14.7  -5.04601   CACGGCAGATTCCGA         GCCCCGTGTCC GAAA GGATGCGGGGC          TTTTTCGTTTCTGCA 100 89
LOY45_RS08535 1857440 .. 1857454 + -11.4  -6.09888   GCAGCCATAAAAAAA               CCCGAC AGT GTCGGG               TTTTTTTTATTCCGG 100 74
LOY45_RS08545 NONE
LOY45_RS08550 NONE
        htpG 1860859 .. 1860874 + -11.8   -5.1861   AGTAGTTGCAGGAAA              GCCCGC TTCG GCGGGC               TTTTTTCATGGTGCA 100 40
LOY45_RS08560 1861772 .. 1861803 +  -6.4  -3.05384   CCTGGTACCGTCGGC      CAGTCTCCGGC-CGC CCA GCGTGCCCGCGCCTG      TTCGATCAGCGCCGG  51 171
LOY45_RS08570 1863740 .. 1863767 +  -3.4  -3.07344   TGCCCGTGTCATAGC        CTGC-CGCCATCA ACC TGATGGAGTGCAC        TATGTTCCCACGTCG  43 63
LOY45_RS08575 1864337 .. 1864353 +  -4.3  -4.07568   GAAGCAAGGACTGCT              GCACTGT TTT GCAGCGC              TTTTGGAGGGAGCCA  61 129
LOY45_RS08580 1866279 .. 1866293 +  -6.4  -3.09635   GATGTTGGCGGAACC               GGCAAT GAA GTTGCC               TTCCATCATCAGCAT  51 306
LOY45_RS08610 NONE
LOY45_RS08615 1874549 .. 1874568 +  -4.2  -2.61264   GTACGCGACGAAGAG            CCGAAGCT GTGA AGCTCTGG             GTTCTGCGTCACGGC  43 14
        sixA NONE
LOY45_RS08625 NONE
LOY45_RS08630 1875939 .. 1875955 +  -4.3  -3.55622   GAGTATTGACCTGAT              TGCCGTC GCC GATGGCC              TTTCCGGACATTGCC  54 32
LOY45_RS08635 NONE
LOY45_RS08640 NONE
LOY45_RS08645 1878568 .. 1878579 +  -4.4  -3.14211   CGATGGTTTCCACGT                CGAA CTGA TTCG                 TTGATCGAGAAGCAT  47 10
LOY45_RS08650 1879858 .. 1879870 +  -3.3  -4.07568   GCAGGCGCGCACGCA                GGCTT CAA ACGCC                TTTTGCGCCGCGCGC  60 235
LOY45_RS08705 NONE
LOY45_RS08710 NONE
LOY45_RS08715 NONE
LOY45_RS08720 NONE
LOY45_RS08725 NONE
LOY45_RS08730 1895365 .. 1895384 + -10.7  -4.30719   CAGGCACAAAAAAAA            CGGCACC TTCACC GGTGCCG             TTTCTTATCCCGCCA  86 93
LOY45_RS08740 1896608 .. 1896630 +  -9.8  -2.72144   TCGCAGGTTCGAGTC           CTGCCGGGTG CGC CAATCGGCAG           CTTTGGCACAAGTAA  62 11
LOY45_RS08745 1896750 .. 1896773 + -12.4  -4.06055   CCCCATATTCCAAAA          GGCGCCCGAT GAAA ATCTGGCGCC           TTTGCTTTAAAAGCT  87 36
LOY45_RS08750 NONE
LOY45_RS08755 1897043 .. 1897074 + -17.4  -4.17491   TCCACCCCATATTCC      CAAAGGCGCCCGAT GAAA ATCCGGCGCCTTTG       TTTTAAGCGTTTCAT 100 32
LOY45_RS08760 1897223 .. 1897237 +  -8.5  -5.42514   GAACGCCTCGAAAAA               GCCGC CTTGT GCGGC               TTTTTTCGTTTCTGG  95 74
LOY45_RS08770 1898410 .. 1898423 +  -8.1  -2.79273   TGCAAGTGTGCTGTC               CAGGC CTTT GCCTG                CTTGTGTTGAGGGGC  57 110
         tig 1899936 .. 1899966 +   -12  -3.02511   CTTCGTAGGAAAACA      C-CACAAGCCAGC CTTCGA GCTGGCTTGTGCG       TATTCAAGACATGAC  73 49
        clpP 1900685 .. 1900708 +  -5.2  -3.24381   GCGCATTGCGCCTAC          CTGCGGACTT GAAA AAGCCCGCAA           TTGCCTTCATCTTGT  52 65
        clpX 1902060 .. 1902084 + -12.2  -4.34402   TGCGGCTCGATTCAA         GCAA-GGGGCC TTCG GGCCCCTTTGC          TTTTCCTGTCGCAGA  90 48
         lon NONE
LOY45_RS08795 1905116 .. 1905135 + -13.6  -4.38927   GGCCAGTTACGAGAA            GGCGCATC CTCG GATGCGCC             TTTCTTCTATCAGGA  95 135
LOY45_RS08800 1907094 .. 1907123 + -17.3  -4.13014   GCTTGATGCTTGAAA       CAGAAAAGGCCGC TGAT GCGGCCTTTTTTG        TTTTCAGGGTCTAGG 100 43
LOY45_RS08840 1917856 .. 1917889 +  -3.7  -2.77899   GGCGCCATTCCGAAC     CCTGAGCTCCGGGCCC CAA GGGCACGGGG-TCAAA     TCATTGATGAAAAGG  43 21
        rnhA 1918366 .. 1918403 +  -3.3  -4.08394   GCGCTGAGCACACCG   GCC-GCCACTCCTCCTTG AGC TGAGGTAGAATGGCCGGC   TTTTCACCAGACTGT  58 34
        dnaQ 1919210 .. 1919223 +  -3.7  -3.33162   CAATTTGCCGCGCAG               GGGCG CTGG CGACC                TTCTACCCTGAGGTG  48 43
LOY45_RS08855 1921785 .. 1921811 +  -4.5  -2.74605   AGAAATAAGGATCTG        TCAGGCATAGAC CACT GTTT-TGCCTGG         TAAGTTTTGCCCGCC  44 284
LOY45_RS08865 1922548 .. 1922558 +  -8.2   -3.7732   GCGGCATCTCGCCTC                 GCGC CAG GCGC                 TTGTTGATGTCGGCA  67 117
LOY45_RS08880 1925471 .. 1925499 + -10.9  -5.00616   CAGGCTTTTCTCAAC        CTGGCTCCGGTAC GCT GAACCGGGGCTGG        TTTTTTCCCGGCAGG 100 8
LOY45_RS08885 NONE
LOY45_RS08890 1931205 .. 1931239 +  -8.6  -2.59564   GCCAGGGAGGGCAGC     GGCCAAACCAGTCA TCCAGAT TGACAGCTTTGGCC     ATTGTCCCGTAACGG  56 48
LOY45_RS08895 NONE
LOY45_RS08900 1933730 .. 1933748 +  -3.9  -3.09004   CCGTCTTGACGGCGC            CTTGCGCA TGGC TGC-CAAG             TAATTTTCGGAGTAG  46 4
LOY45_RS08905 NONE
LOY45_RS08910 NONE
LOY45_RS08915 1936894 .. 1936917 + -18.2  -4.40358   GATCGTTGAAATGGA          TCGGGCGCTG CTGC CAGCGCCCGA           TTTTCTCCCGTCACT 100 32
LOY45_RS08925 1943211 .. 1943224 +  -8.1  -3.13403   GTAGCATTCGACCGG               CACCG GCAA CGGTG                TATTAATAGAAGCAC  60 74
        pqqA 1943353 .. 1943382 + -19.3  -3.89695   TCGCTGATCCCTCTT       GCGCCGGTCGCTG CTTG CAGCGGTCGGCGC        TTCTGTTTCTGCCCG 100 31
LOY45_RS08935 NONE
LOY45_RS08940 1946345 .. 1946355 +  -4.6  -5.88565   TCCCTGGGAAAGCGC                 CTGC GCT GCGG                 TTTTTTTGTTATAAA 100 84
LOY45_RS08945 1946992 .. 1947025 + -21.9  -5.09204   TGCGCAGGTCTCAGA     CAAAACCCCCGGGGA GCGA TCTCCGGGGGTTTTG      TTTTTCTTGCCCTGT 100 43
LOY45_RS08950 1948768 .. 1948784 +  -5.1  -4.82901   CGCCGATGTAAAACA              GCTATGC CGG GGATAGC              TTTTTCTGCAGGCAC  76 55
LOY45_RS08955 1949484 .. 1949495 +  -4.4  -4.07687   CGCGTTGCTTTGCCA                GTCT GCAC AGAC                 TTTTCAAGCACCAAT  61 440
LOY45_RS08965 NONE
LOY45_RS08970 NONE
LOY45_RS09010 1958552 .. 1958580 +  -5.1  -3.28712   CCAGGTCGCCGCGGG        TGCGGGCGGCGTC AAG GATGCTGGCGGCG        TTGTCAGCCGCCGCA  49 481
LOY45_RS09025 1961745 .. 1961762 +  -5.5  -4.13767   CACAATATCTCTTGA             CCTCTAG TTAA CTTGAGG              TTTTACCCTGCCAGC  64 504
LOY45_RS09035 1962428 .. 1962452 +  -5.5  -3.28712   CACGTCACCGGCAAA          CTCGGCGCAGG CGC CCAGTGCCCGG          TTGTCCCCCGGGCCG  51 260
LOY45_RS09050 NONE
LOY45_RS09055 1967442 .. 1967461 + -12.8   -4.7373   AACAGCAGCAAAAAA            GGGCGGCC GTTG GGTCGCCC             TTTTTGGTGGGATGC 100 53
LOY45_RS09070 1970969 .. 1970985 +  -3.7  -3.32844   ATCACCTCCTTAATC              GACAG ACATCAG CTGTC              TTATGAGCTCCCACA  48 29
LOY45_RS09075 NONE
LOY45_RS09080 1971226 .. 1971266 + -10.7  -4.60889   CCACCTTACGTCAAA  GCTTAGAAATGAATATTCG GCT CGAATATTGATTTCTGAAC  TTTTTCAGAATCGTT  93 38
LOY45_RS09085 1974438 .. 1974451 +  -5.3  -4.15222   GTGTCTAACAAGACC               TTCTG GCAA CAGAA                TTTCTTGACGACCAT  64 145
         rrf 1974579 .. 1974614 + -19.2  -3.54447   GTCAAGATTAAATTC    CGAAACCCCTATCTGC GTAT GCAGGTAGGGGTTTTG     TCTTTCTGGGGTCTG 100 34
LOY45_RS09105 NONE
LOY45_RS09110 NONE
LOY45_RS09115 NONE
LOY45_RS09120 1979369 .. 1979383 +  -7.8  -3.05463   CAGGCTCGGGTCGAT               CTGGGT CAG GCCCAG               TTCGGTCAGGCGGAT  55 417
LOY45_RS09140 1984799 .. 1984819 + -12.6  -3.55444   CTAGGGCTGCGCAGG            GGCTGAGC GCAAG GCTCAGCC            TTTGGCGGGTGGCGG  81 37
LOY45_RS09160 NONE
LOY45_RS09165 1992041 .. 1992076 +  -9.6  -3.07962   TGAATTTGCGTTGAC    TGGATCGCGGGGCAAG TCGG CTCGCCCCGCGATGGG     TATTAAGGTCTGCGC  66 27
LOY45_RS09175 1992907 .. 1992921 +  -2.7  -3.56092   GCGGGCACGGCAGCA               CCACC AGGCC GGCGG               TTTCGGCAATGGTCC  50 148
LOY45_RS09185 1994921 .. 1994937 +  -9.3  -3.76224   CACGCCTTCGCTGAA              GCGGCCG ATA CTGCCGC              TTTGATCACTCACGC  71 233
LOY45_RS09200 1996742 .. 1996779 + -16.4  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTATTG CATGCA CCGTACCTGTGGGAGC    TGGCTTGCCAGCGAT  85 49
LOY45_RS09205 1999671 .. 1999724 +  -5.2  -4.63218   TGCAACGCCTCCAGG CTAACGTCCG-GCTG-GCCGGCCAGC GGAT GATGGCTGGCGCAGTACAGGCGCTGG TTTTCTTCGAACAAC  77 343
LOY45_RS09215 NONE
        speB 2002478 .. 2002497 +  -4.9  -4.07687   CGCGCCTTAGGCTAT            CCAACGC TTGGGC GCGCTGG             TTTTCGGCGCCGCGT  61 97
LOY45_RS09225 NONE
LOY45_RS09230 2004185 .. 2004197 +  -4.8  -4.07568   TACTGCGCTGCAGCC                GCAG AATGC CTGC                TTTTGCGACGGACGC  61 179
        zapE NONE
LOY45_RS09240 2006428 .. 2006449 +  -5.7  -3.64703   AGGCCGATGACCTGG           TAGGCGTCC TTGT GGTCGCCCA            TTTCCATGCCCGGCG  57 522
LOY45_RS09265 2010748 .. 2010762 +  -4.9  -3.85698   CCCGTACCGCCACCG               GCTGC CTGAA GCGGC               TTTGTGCCCGGCCCC  57 17
LOY45_RS09270 2011799 .. 2011809 +  -4.6  -4.14739   TGATCAACAGGTCGA                 CGGT CGC GCCG                 TTTTGCAGTGCATGC  64 250
LOY45_RS09300 2019625 .. 2019682 +  -3.9  -5.95946   ATGAGGATGAAAACG GGGAGGGCGGGAAGCACTGAGGGGAGC CTAG GCTCCCCTCAAAGATTGTTGCGTGCTC TTTTTTTGTTATTGG 100 6
LOY45_RS09315 2023034 .. 2023067 +  -8.7  -3.01712   GCCATCAGGTAGTGC     TGGGAGCGCAGGGCG ACCT TGCGCTGCACGCCCA      TCTTGCCCAGGGCCA  56 317
LOY45_RS09325 2025463 .. 2025483 +    -6   -3.2614   AGGGCCAGGAACAGC            GGCGTGGC ATAGC GCAGCGCC            TTGCTCTGCCCGGTG  51 407
LOY45_RS09345 NONE
LOY45_RS09350 NONE
LOY45_RS09355 2035373 .. 2035383 +  -8.2  -3.14132   ATCAGGTTGTTGGTG                 GCCG CGG CGGC                 TTCCTGCAGGCCGCG  57 516
LOY45_RS09380 2038013 .. 2038023 +  -4.6  -4.09739   GGATGTGTTCATTGC                 CGGG ACG CTCG                 TTTTCGCCGGCTTCA  64 349
LOY45_RS09390 2040857 .. 2040867 +  -8.2  -3.16564   TCTTCACCCGCACTT                 CGGC CAG GCCG                 TTGATCCGCTCGCCG  57 236
LOY45_RS09400 2043208 .. 2043226 + -11.6  -3.44051   TTCGCCCGGGGTCGA             GCGGGCGG CGT CCGCCCCC             TTGTCGTCGTAGCCC  72 79
         icd 2073954 .. 2073999 + -25.7  -2.78596   AGCACATGTAAGCGG CACAAGAAAACCGGCCAGTCC TTGC GGGCTGGCCGGTTTTCTTTTG TCTGATCGCCGGCTC 100 30
        clpS NONE
        clpA 2077275 .. 2077295 + -15.4   -4.4773   CAGAGCCAACAAAAA            CGCCCGGC ATTTA GCCGGGCG            TTTTCGTTGGTGTCG 100 144
        ftsK 2081881 .. 2081899 +    -6  -2.59837   TGCAACGAGGATTTC             CATGCG CCTGATT CGCATG             CTGTTGGTTTCCGCT  48 88
        lolA NONE
LOY45_RS09570 NONE
        crcB NONE
        serS 2085497 .. 2085510 +  -4.5  -2.55015   CAAGCCGTACATGGG               TGGCC TGGA GGTCA                TCGGTTAAATGGAAT  43 4
        cysG 2086927 .. 2086964 + -14.1  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGCACTGT ATGC ACTGCACCTGTGGGAGC    TGGCTTGCCAGCGAT  78 45
LOY45_RS09630 2093034 .. 2093051 + -11.3  -4.84529   TCCGCCATCTTCAAA             GCCCTGA TTAT TCAGGGC              TTTTTGCGTTTCTGG 100 34
LOY45_RS09650 2095403 .. 2095430 +  -2.6  -3.65199   GGTCTTCGGCCGGGA        GTTCCAGTAGGGC TCG GCCC-GCCGGAAG        TTTCAGTAGCGGGTT  50 221
LOY45_RS09675 2096856 .. 2096873 +  -7.7  -3.30474   CCTGATTAATTGAGT             GGAGTAC AAAT GTGCTCC              TTGGTCATTCTGGGG  59 36
LOY45_RS09685 2098442 .. 2098469 +  -4.8  -3.36671   GTGCCGATCTGTGTA        GCGA-ACTGCTCG AGC CCAGCTGTATCGC        TTGTAGAGTTGGCGT  49 429
LOY45_RS09700 NONE
LOY45_RS09705 NONE
LOY45_RS09710 2102511 .. 2102532 +  -2.3  -5.18561   CCGAGGGCTCAGGCA           GTGCAAGCAG AGC CT-CTTGAAC           TTTTTTAGCTATTTC  83 267
LOY45_RS09725 2105409 .. 2105422 +  -9.5  -5.42259   CACACAGAACACCGA               CCGCC GCCT GGCGG                TTTTTTTACGCCTGG 100 45
LOY45_RS09730 2109320 .. 2109332 +  -3.3  -3.32844   TAACCGCATGAGTCA                CGGTC TAC GAACG                TTCTCGGGTGCCGGG  46 30
LOY45_RS09735 NONE
LOY45_RS09740 2110433 .. 2110445 +  -4.7  -4.07568   ACAAACCGTCACCGG                CACCG GCA CGGCG                TTTTCCGCCAACAGC  61 134
LOY45_RS09750 2111785 .. 2111800 +  -7.5  -4.89063   CAGTGAACACCCACA              CCCGC CATCGA GCGGG               TTTATTTTTGCCTGG  86 47
LOY45_RS09755 2112425 .. 2112471 +  -4.9  -2.66912   GGGCGCTGTATGACC TTGCGCTGAAGGTGCTGGCGT GATCA GCGCGCGCACGATCGGCGCGG TAGTGTCGCTTGCGT  43 3
LOY45_RS09760 2113037 .. 2113052 +  -6.2  -3.69618   AGCTTGTTCATTAGG              CTGTAT AAAT ATACAG               TATTTTGAGGTTGCA  58 109
LOY45_RS09770 2114763 .. 2114774 +    -3  -4.43877   TCTGAGCACTAGAAG                TAGT TGAA ACTA                 TTTATTTAGAGGTTG  64 405
LOY45_RS09780 NONE
LOY45_RS09785 NONE
LOY45_RS09790 2116893 .. 2116922 +  -6.3  -2.71364   CCGTGAGCCACCTTC       TCGCCCCGGGC ATTGATCG GCGCGGCGCGA        TCCTTGGCCCAGTGC  46 473
LOY45_RS09800 2118032 .. 2118049 +  -6.9  -5.07486   TTGGAGATACGACAG             CCCCTTG AAGA CGGGGGG              TTTTTCTTGGCGGTG  86 512
LOY45_RS09825 2121132 .. 2121157 +  -3.2  -4.07687   GCGAAGATTTGACCG         GAAACCGTCC TTGATC GAACGGATTC          TTTTGGCCGGAAGGT  58 12
LOY45_RS09830 2121652 .. 2121664 +  -3.3  -4.30441   CGCCTGGGCCTGATG                GATGG CCA CCAGC                TTTTCGATGTTCTCC  64 201
LOY45_RS09850 2124244 .. 2124274 +   -14  -2.66118   AGTAGTGAACAATAG       GCGAGGGGCATC GAGTAAA GCTGCCCCTCGC       TCCATTCCTTTTAAA  78 36
LOY45_RS09865 2126016 .. 2126030 +  -2.7  -3.10409   TAGTTTAAAGGCACG               CCCGC GATAA GAGGG               TTGCGTGCCTTGCTG  43 54
LOY45_RS09870 NONE
LOY45_RS09875 NONE
LOY45_RS09880 2128138 .. 2128164 + -12.3  -4.57073   GGCTTGGCAACAGGC         GTCCTCGCGCA CCCGC TGCGCGAGGAG         TTTTTACAGGGCGTG  95 41
LOY45_RS09885 2130129 .. 2130169 + -13.4  -2.85668   CACAAGGCTGAACAA  ATGCGTAAGGCTGCTC ACTCAAGCG GAGCAGCCTTACGCGC  TCTGGTATCCCCGTC  76 65
LOY45_RS09895 2131154 .. 2131172 + -11.7  -5.22039   ATCGTTAGTAAAGTA             GCCCAGC CCCGC GCTGGGC             TTTTTTGCATTTGGC 100 62
LOY45_RS09905 NONE
LOY45_RS09910 2133195 .. 2133205 +  -3.2  -3.61715   CAAGGCCGAAGTAGG                 CGTC GCC GATG                 TTGTTCCAGCGGATG  51 321
LOY45_RS09925 2135672 .. 2135700 +  -5.2  -3.53444   CAGGAGCGCCGGTGT       CGTGCCCGGCGTG ATAG CATGCCGC-CGCG        TTTCAAGGCGCGTCA  54 48
LOY45_RS09930 2136565 .. 2136581 + -11.5  -3.01712   CTTGACCAGTTGCGC              CTGGCGC GTG GCGCCGG              TCTTGGCGAAGACAC  65 498
LOY45_RS09960 NONE
LOY45_RS09965 NONE
LOY45_RS09970 NONE
LOY45_RS09975 2145598 .. 2145632 + -21.4  -4.25104   CTATCGCTGAGAAAG     ACCAACGCCCCGACCG GAT CGGGCGGGGCGTTGGG     TTTTGCTGCGCGGGG 100 31
LOY45_RS09990 NONE
LOY45_RS09995 NONE
LOY45_RS10030 NONE
LOY45_RS10035 2160910 .. 2160930 +  -7.5  -3.06183   GTCCCAACAGACGAT            GCCCGGC CTTGCGC GTCGGGC            TTGAATAGCGCTCAA  57 115
LOY45_RS10040 NONE
LOY45_RS10045 NONE
LOY45_RS10050 NONE
LOY45_RS10055 NONE
LOY45_RS10060 NONE
LOY45_RS10065 NONE
LOY45_RS10070 NONE
LOY45_RS10075 NONE
LOY45_RS10080 NONE
LOY45_RS10085 2170678 .. 2170703 + -18.3  -5.24449   CGCCGATGAGGCGGG         CCGCGCCATCC GCGA GGGTGGCGCGG          TTTTTTGCATTTATG 100 52
LOY45_RS10090 NONE
LOY45_RS10095 NONE
LOY45_RS10100 NONE
LOY45_RS10105 NONE
LOY45_RS10110 NONE
LOY45_RS10115 NONE
LOY45_RS10120 2178122 .. 2178179 +  -8.4  -3.17714   CAGCGTGCGCGAGCC GCAGTAGGGCTCAGGCAAGGCC-CACCCC ACC GGGGTGTGGCCTTGCGGGAGG-CAGC-GC TTACTGCGACTTTGC  60 19
LOY45_RS10130 NONE
LOY45_RS10135 NONE
LOY45_RS10140 NONE
        dmpG 2182790 .. 2182806 + -13.7  -2.71144   GGCCTTGCCAGCGAT              CGAGCGC ATA GCGCTCG              TAGTTCAGACAACTC  75 117
LOY45_RS10165 NONE
LOY45_RS10170 2187756 .. 2187768 +  -2.6  -4.34345   CAGTTTTTAGTCTGG                GGCG CACAA CGTC                TTTTCCTCGTCTGTG  60 84
LOY45_RS10235 2202090 .. 2202102 + -10.5  -2.85712   CAGCAGGGTGACGCT                GGCCG GGG CGGCC                TGGTTGTAGCTCTGG  60 261
LOY45_RS10255 2205404 .. 2205431 + -20.6  -5.27335   GCAGGAACAAAAACA        GGCCGAGCCCCG GCGA CGGGGTTCGGCC         TTTTTGTTTCAGGAA 100 44
LOY45_RS10265 NONE
LOY45_RS10270 NONE
LOY45_RS10275 NONE
LOY45_RS10280 2213784 .. 2213797 +  -3.1  -3.59979   GCCGCCAACCCGTTG               GC-CAG CAA CTGCGC               TTTGAGCTGCGGCCG  50 499
LOY45_RS10295 NONE
LOY45_RS10300 2217447 .. 2217491 +   -10  -2.77899   CTGAGGCTACCCCTG GGTACTACGTCGTGGGCCGAAC CGG GTTCGGCCC-CGTCGTGG-GCG TCGTTACTCAAAACA  63 37
LOY45_RS10305 NONE
        ribA 2219143 .. 2219153 +    -4  -3.88232   AGTCCAGCCACTCCA                 TCAA GCT TTGA                 TTGTTCTCTGAAGAA  58 15
LOY45_RS10315 2220849 .. 2220867 +  -6.7  -3.18264   ACGGCAACATCTATG            GCATCGCC GCCC GGCG-TGC             TTCCTGAGTGCGAGG  54 0
LOY45_RS10320 2221562 .. 2221593 + -20.2  -3.90901   AACTGAGGGTGATCA      CGGCCGGGATCTGA GGTT TCAGCTCCCGGCCG       TTCTGTTTACTTCCT 100 35
LOY45_RS10335 2224322 .. 2224358 + -20.3  -3.59738   GTCACCCTGGGGTGC    GACAAAATAGCCCGGCC ATT GGTCGGGCTTTTTTGTC    TTTGCCCGTGTGGTC 100 50
LOY45_RS10340 2224674 .. 2224691 + -14.1  -5.87688   ACGAATCGTCCACCA             CCCCGCC CAAC GGCGGGG              TTTTTTTTGCATTGT 100 41
LOY45_RS10345 2225192 .. 2225206 +  -2.8  -3.07994   GGCAGAATAATCCTG               CAGG GCAATCG CCTG               TTCCATGCAGTTCAA  43 118
LOY45_RS10360 2228042 .. 2228060 +  -7.4  -3.40052   TTGGCGCTGATGATC             TCGGCC TCATCCT GGCCGA             TGTTCTTGAAGCTGT  58 182
LOY45_RS10370 2229863 .. 2229889 +    -8  -3.61715   GCCCAGGCCCTGCAC        GGCGCCGATGG AACCGG CCGT-GGCGCC         TTGTTCGGAGGCGTC  63 154
LOY45_RS10410 NONE
LOY45_RS10415 NONE
LOY45_RS10420 2240140 .. 2240159 +  -5.6  -3.53811   CGCCTGCTGGCTGAT            GCGTGGGT AAAA GCCTGCGC             TTTGGCACAGGTCAA  55 225
LOY45_RS10430 NONE
LOY45_RS10435 NONE
LOY45_RS10440 2243277 .. 2243291 +  -3.4  -3.01831   GGCGCAACAGAAAAC               GGCCTG AGT CGTGCC               TGGTATTTTTACCAG  42 19
LOY45_RS10445 2244057 .. 2244067 +  -6.8  -3.27774   CGCGCCCCCGTGCCA                 GCCT TGT AGGC                 TTGCTCATTGGCCTG  54 490
LOY45_RS10470 NONE
LOY45_RS10475 2250282 .. 2250292 +  -3.2   -4.1891   GAATAGCCCAGCAAC                 CAGC CCT GTTG                 TTTATGTTCACCGGC  60 215
LOY45_RS10485 2253332 .. 2253346 +  -5.6   -3.9279   TTCGATGCGGCTGAC               CTCGAC GCC GCCGAG               TTTGTAGGGTTCGAT  62 337
LOY45_RS10495 2254573 .. 2254591 +  -3.7  -4.57569   GATGACCGCGGCGTT             GGCCTGG ATCAC CCCGGTC             TTTTTCAAGCGCTGG  71 465
        rarD 2256013 .. 2256039 +  -5.1  -5.64274   TTTCCATCAGCTCGA        CGATG-GTGCGC AGTG GCGCGCTCATGG         TTTTTTTCTGGCTGC 100 285
LOY45_RS10515 NONE
LOY45_RS10520 2258210 .. 2258224 +  -3.4  -3.75015   CCTTGAGCTTTTTCT               CCATGG CTA CCGGGG               TTTCATAGCCGTTGT  54 159
LOY45_RS10530 2260126 .. 2260139 +  -3.7  -3.14132   TTCATGGATGAGATT               GGCAG CCCG CAGCC                TTGATCGACACCACA  46 8
LOY45_RS10535 2260630 .. 2260646 +    -3  -2.74461   ACAAACGGCGGTTCA             GCCTCTA TAAG TAG-GGC              ATTTCCCACTCAATG  41 40
LOY45_RS10540 NONE
        hutG NONE
        gltS 2263967 .. 2263984 +  -6.9  -3.85698   CGCGGTTGCCCAGAT             GCCAGTC AATG GACGGGC              TTTATAGGCCAGCGG  64 338
LOY45_RS10565 2267113 .. 2267127 +  -3.5  -3.83561   CTTGGAGCAAGGGAA               GGCAC AATGC GTGTC               CTTTTTTTGGCCGGC  55 83
        nspC NONE
LOY45_RS10575 2269582 .. 2269598 + -11.5  -2.53263   CCGGTGAGCGGTCGA              GGCGCCG ATC TGGCGCC              TCGATTCAGAGTAAG  67 86
LOY45_RS10580 2269915 .. 2269931 +  -2.3  -3.35176   TCGCTCCCAGAGCAA              TTGCA ACACCCA TGCAA              TTACTGTCATTGTTG  44 73
LOY45_RS10585 2270925 .. 2270938 +  -5.9  -4.59773   GGCGGCCGACAAACC               CGGCG TCCT CGCTG                TTTTTGAAGGTCAGG  79 340
LOY45_RS10635 2281820 .. 2281844 + -10.7  -3.57263   ACGTTGCACAGCCGC          GCCAGCTCAGT GCC GCTGACCTGGC          TTTGCGGATGGGCCT  71 305
LOY45_RS10645 NONE
LOY45_RS10650 2284094 .. 2284117 + -17.4  -4.02022   CGCGCGTGAGAAGCG          GGCGGCCCGG AAGA CCGGGCTGCC           TTTCTCGTGCTTGCA 100 42
        dapF 2285203 .. 2285216 +  -3.7  -3.53012   ATACAAGGATGTGGT               CCAGG CCAA CCGGG                TTTCGGCAGCCCAGC  51 206
LOY45_RS10685 2292208 .. 2292227 +  -2.8   -2.9155   AAACCCGGATAATGG            CGGCCAAA TCGT TTTGCTCG             TATGGTATTCCCGCA  42 69
LOY45_RS10690 2294457 .. 2294486 + -18.1  -3.89524   GCTAACACGCGCTGA       CAACAAAAGCACC TTCG GGTGCTTTTGTTG        TTTATGCGCTGGGGT 100 36
LOY45_RS10695 NONE
LOY45_RS10700 NONE
LOY45_RS10705 NONE
LOY45_RS10710 2299889 .. 2299928 +  -4.2  -5.50723   GAACACCTTGATGCC  CAGCCAGCGTGAGAGCGTT CTG AACGAACCCA-GATGGCTG  TTTTTGTTTTCATAC 100 319
        nfsB NONE
LOY45_RS10735 2303162 .. 2303204 +  -6.2  -2.53876   TTAGCGCATTGCGTC TCGGC-GCGGGCCCGGCATG ACCGC CGGGCCGGG-TAGCTGCCGA TCGCTTGAAATGCAC  48 37
LOY45_RS10755 NONE
LOY45_RS10760 2307737 .. 2307750 +  -3.8  -3.51406   AGAACGGGATGTTTC               CGAC CTTTTT GTCG                TTGATCTTTATGATG  51 334
LOY45_RS10795 2313881 .. 2313892 +  -3.6  -3.04398   TACCTTCGGGGTGAG                TGCG ACTA CGCG                 GTTTTGAGCCGGGGC  44 7
LOY45_RS10800 2314433 .. 2314471 + -11.7  -2.52543   TCGCCGGCAAGGCCG  GCTCCCACAGGGAACTGT GAAC GCTGA-CCCTGTGGGAGC   TGGCTTGCCAGCGAT  67 66
LOY45_RS10810 2317336 .. 2317361 + -15.5  -3.55622   TCATAACGCAAGCAA         GGGGTGCAG-GC AGT GCGCTGCACCCC         TTTCAACACGTTCAG  91 35
LOY45_RS10820 2318959 .. 2318980 + -11.5  -4.57569   GCATAACGAACCCTC           GGCGCCAGC GCAG GCTGGCGCA            TTTTTAAAGGAGTAA  95 35
LOY45_RS10825 NONE
LOY45_RS10830 NONE
LOY45_RS10835 2322051 .. 2322067 +  -2.9  -2.78384   CGAGAGCTTCGAGCG              TAGCGAG GAG TTCGCGA              TCTGATGGGCAAGCA  41 4
LOY45_RS10840 2322848 .. 2322872 +  -2.8  -4.09685   GAGGCAGGAGCGGGC          TTGCCCCG CGATGCGGA CGGCGCAA          TTTTGAAAGCTCAGG  58 46
LOY45_RS10845 NONE
LOY45_RS10855 2327260 .. 2327271 +  -7.2  -3.30124   CGCAATAAATTCGCT                GCGC TGTA GCGC                 TTGTCCCGGCTGGAG  59 52
LOY45_RS10860 2328002 .. 2328018 + -13.7  -2.55544   GGCCTTGCCGGCGAT              GGGCTGC AGA GCAGCCC              TAGATTCAATCCTGC  75 67
LOY45_RS10895 2332921 .. 2332935 +  -4.2  -3.34398   GAAGTCGATGAACAC               CCGC AGCCGTG GCGG               TATTTGCCGCCCCGA  49 82
LOY45_RS10905 2335071 .. 2335085 +  -2.7  -2.52464   GGCTTTGCCCCCGGT               GCACG GGTAG CGCGC               TAAGTTCGGCAGCCA  39 8
LOY45_RS10910 2338007 .. 2338017 +  -6.8  -3.53761   CCGGCTCCAGGCGCG                 CCAG GCT CTGG                 TTTCGCGGCACGTTG  57 517
LOY45_RS10920 2339219 .. 2339229 +  -5.4  -3.03124   TGAATGCGCCGAACT                 GTTC GAG GAAC                 TGTTCGGCGCTGGCC  46 82
LOY45_RS10945 NONE
LOY45_RS10950 2344540 .. 2344551 +    -3  -3.29558   CAGTAAAAGTATTTT                TCAT GCAA ATGA                 TATTAATTCGTCTTG  46 35
LOY45_RS10955 2347010 .. 2347020 +  -2.4  -4.67353   AACTTGATGTTGACC                 ACCC GCT GGGA                 TTTTTGACTGGCTAA  65 8
LOY45_RS10970 2349537 .. 2349557 +  -5.3  -4.13282   GCGAATCAAGCGTCT            CCTGCATGC CTT GTACGCGGG            TTTTCCAGCTGTCGT  64 289
LOY45_RS10990 NONE
LOY45_RS10995 2354681 .. 2354703 +  -9.1  -3.53811   TTGTTCAACAGGGTG          TCGGC-CGGC AGCG GCCGTGCCGG           TTTCAACCAGGTCAC  65 382
LOY45_RS11005 2357032 .. 2357062 +  -5.2  -3.21276   GCGGATTTCCAGTTC       GCTGCTGGCGATCA GCG TGTGCACCAGCCGC       TCTTGTGCCCGCAGG  49 375
LOY45_RS11040 2363683 .. 2363695 +  -4.8  -3.60792   GCTTCGCCTTCCAGT                TCGC GCACG GCGA                TTTCCAGGTTGCGGC  55 64
LOY45_RS11055 2367141 .. 2367162 +  -3.7  -3.19192   CAGGGTGAAATAGGC           CAGCAATGA GGAG TCGTTGGTG            TTCACTTCGATACGG  47 128
        lexA NONE
        imuA NONE
LOY45_RS11085 NONE
LOY45_RS11090 2375489 .. 2375528 + -13.7  -2.52543   TCGCCGGCAACGCCG GCTCCCACAGGGGATCGGT GTGC GCCG--CCCTTGTGGGAGC  TGGCTTGCCAGCGAT  75 62
LOY45_RS11110 2380772 .. 2380802 +    -3  -3.96148   TGCACTCCAGCAGAA       CGTCCAGCAGCGCC TGG GCCGCTGCCGAGAG       TTTATGGTCGGCCAG  58 74
LOY45_RS11120 NONE
LOY45_RS11125 2383201 .. 2383228 +   -12  -2.52543   ATCGCTGGCAAGCCA        GCTCCCACAGAG TGGA CCTTGTGGGAGC         TGGCTTGCCAGCGAT  70 71
LOY45_RS11130 2385143 .. 2385156 +  -5.9  -3.31263   CCAGGGCCATTTCCA               GGCCG ATCA TGGCC                TTGTAGGCCTCAGGT  53 450
LOY45_RS11150 2388484 .. 2388510 + -10.8   -2.5294   GCATCGCTGGCAAGC         CAGCTCCCACAG GTA CTGTGGATGCTG         ATCTTGTGGGAGCTG  64 47
LOY45_RS11180 NONE
         tam 2396771 .. 2396806 +  -3.8  -4.19953   TCGATGAAACCGCCT    TCGTAACCGGCCAGGCC CGA GGCCTGGC-GCAGGCGG    TTTTCCCATTCGGTG  62 185
LOY45_RS11195 2397753 .. 2397786 + -20.5  -4.78149   TGCGCTGAGCGAATG     CACGCGAGGGAGGATC AAT GATCCTCCCTCGC-TG     TTTTTACCTTATGCC 100 33
LOY45_RS11215 NONE
LOY45_RS11220 2405232 .. 2405242 +  -8.2  -3.55071   GCTTGCCAGCGATGG                 CCGC GCC GCGG                 TTTCAGAGGCTGTCC  66 105
LOY45_RS11230 NONE
LOY45_RS11235 NONE
LOY45_RS11240 2409869 .. 2409889 + -15.5  -2.52543   TCGCGGGGCAAGCCC            GCTCCCACA GTG TGTGGGAGC            TGGCTTGCCAGCGAT  81 61
LOY45_RS11250 2413317 .. 2413333 + -13.7  -2.74563   GGCATTGCCGGCGAT              CGAGCGC GCA GCGCTCG              TAGTTCAGGTCTCAG  76 116
LOY45_RS11260 NONE
LOY45_RS11265 NONE
LOY45_RS11270 2416327 .. 2416341 +  -3.4  -3.07113   GAGCTGAGTTTCTGA               GCCGTG ACC CGCGCC               TTGCCTGCGCTGCTG  43 26
LOY45_RS11275 NONE
LOY45_RS11280 NONE
LOY45_RS11285 NONE
LOY45_RS11290 NONE
LOY45_RS11300 NONE
LOY45_RS11305 NONE
LOY45_RS11310 NONE
        feaR 2425977 .. 2425993 + -12.3  -2.89683   CATCGCCGCTGACTT              GACCGCA GGA TGCGGTC              TGTATAGGCTCGCCT  73 50
LOY45_RS11320 2427321 .. 2427331 +  -2.4  -2.57344   GATCCGTATTTGTTG                 GGGG AGA CACC                 GTTATGAGAAGCCTG  38 39
LOY45_RS11325 2427941 .. 2427978 + -16.3  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTTCGGT GCAT GCAGTACCTGTGGGAGC    TGGCTTGCCAGCGAT  85 47
        hpaR 2430307 .. 2430345 +  -6.8  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAAGGTCC TCTGTAAACC GAACCT-GTGGGAGC   TGGCTTGCCAGCGAT  50 45
        hpaA 2439285 .. 2439300 +  -6.1  -3.35813   GGGGGGGCGCTAAAC              CGACG TGTAAC CGTCG               TTCCTTAACCTAGGG  54 518
LOY45_RS11410 2444706 .. 2444744 +  -8.8  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGGTCCG GTGCATA CAGTTCTTGTGGGAGC   TGGCTTGCCAGCGAT  58 47
LOY45_RS11415 NONE
LOY45_RS11420 2447194 .. 2447208 +  -7.1  -3.28712   ACTCGACGGCGCCGC               TGGCC GTCGG GGCCA               TTCTGCGCGGGACCG  56 186
LOY45_RS11425 NONE
LOY45_RS11430 NONE
LOY45_RS11435 NONE
LOY45_RS11445 2452651 .. 2452688 +  -9.9  -3.53811   CCCATCGCCGGCAAC   GCCAGCTCCCACA TATCCTGGCCCT TGTGGGAGCCGGC    TTTGCCGGCGATGCA  70 62
LOY45_RS11450 2453597 .. 2453608 +  -5.8  -3.18582   GTTGCCGGTCAGCAG                CAGG GCGC CCTG                 TTGCTCGCTGACCTC  52 455
LOY45_RS11510 2468529 .. 2468544 +  -4.7  -3.16117   AAAGTGAAAAAATGA              CGTCA GGCAAA TGACG               TGTTCCGTTAGGTCT  47 34
        uvrY NONE
        uvrC 2471084 .. 2471104 +  -3.2  -3.54638   ATGCCAACCTGCATA            GCGAGTAG AATGC CTGCTCAC            TTTGCAGCCAGTTGT  50 18
        pgsA NONE
LOY45_RS11530 2471871 .. 2471884 +  -9.5  -5.42514   TAGTGATAGAAAAAA               GGCCC TTAG GGGCC                TTTTTTCGTTTCTGC 100 73
LOY45_RS11540 2474051 .. 2474062 +  -3.6  -3.09635   ACCGGCGGATAGCAA                CGTC CAAT GGCG                 TTGGCTCATGAACAT  46 43
LOY45_RS11545 2474707 .. 2474722 +    -6  -3.07816   TTTCGCCATGGCCGT              GCCGGG ATAG CCAGGC               TTGAGTGCGTGCGCG  49 332
LOY45_RS11555 2476799 .. 2476816 +  -2.7  -4.85599   GGATCGCGATGGACG             TTGATGG ACAA CCATTGA              TTTTTATGGAATCGA  74 141
LOY45_RS11565 2478200 .. 2478211 +  -3.6  -2.96899   CTGGTTGGGATGTGC                GGGT CAAG GCCC                 TGTAGTTGATTGCAC  44 5
LOY45_RS11600 2487915 .. 2487968 +  -3.8  -2.75712   GCAAATCAAGGCCCC TGG-GCCGCTCCGGG-CGGAC-ACTGA TGC TCCGTAGCCCGTCTCGGAGCCCCGCCA TGCTTGACTCACTCC  43 61
LOY45_RS11605 NONE
        hemN 2490871 .. 2490891 +  -7.5  -3.56821   CGGTCTTGCCCGGCA            TCGGCCGCA GGG TGTGGGCGA            TTTCCAGGGTCTGCT  63 222
LOY45_RS11670 NONE
LOY45_RS11675 2501229 .. 2501254 +  -5.3  -3.13368   GGTTTACCTGCTGGG         TTGAGGAGGGC GCAT GCCCACATCGA          TAGTTCTTTTGCTGT  50 22
LOY45_RS11680 2501501 .. 2501522 +  -2.3  -3.33744   GTAAAACCATCGGCG           TTTCTTGAT CGCC ATCAAGCAG            GTTTTTGCCCCGCGC  44 48
LOY45_RS11685 NONE
LOY45_RS11690 2503471 .. 2503496 + -16.9  -4.17701   GTTGCTTGATCATGT         GCGGCCCGGCTG ATC CAGC-GGGCCGC         TTTCTGCTTTGTGCA 100 49
LOY45_RS11695 2505498 .. 2505508 +  -8.2  -3.37493   GCTCGCAAGTGCTGG                 CCCG GGC CGGG                 TTGGTGTGTTCGCAA  60 162
LOY45_RS11710 2507788 .. 2507800 +  -4.1  -2.83344   GCGCCTGGAGGCGAA                GGATG TTG TATCC                GTATTTGTTGGTGAT  43 41
LOY45_RS11715 2508369 .. 2508393 +    -2  -2.52543   GCTCCCACAAGTCCG          GCGTACACAG ATCCA CTGTGGGAGC          TGGCTTGCCAGCGAT  38 167
        norR NONE
        pdxH 2511609 .. 2511624 +  -3.2  -2.52464   CTGAACCCGAAGAGA              TACCTC CAAG GAGGAA               TAGGTTCGCCCAGGC  39 37
        moaB NONE
LOY45_RS11740 2513508 .. 2513529 +  -7.3  -4.63527   AAGGCTCTACTGGGT           GCGCTGGCTA GAC TGGC-AGCGC           TTTTTCCAGTGCTCC  79 59
LOY45_RS11745 NONE
LOY45_RS11750 NONE
LOY45_RS11755 2516151 .. 2516176 +  -9.7  -3.14132   TTGGACACCTGCAGC         T-CGACCCGGCC ACT GTCCGGGTCGCA         TTCCTGCAGCAGGAA  60 208
LOY45_RS11775 NONE
LOY45_RS11780 NONE
LOY45_RS11785 NONE
        narH NONE
        narJ NONE
        narI NONE
LOY45_RS11805 NONE
        moaA 2531089 .. 2531102 +  -3.9  -4.15222   CACAACCTGGCAACC               TTGAT ATCG ATCAA                TTTCTTCCACCCGCT  60 155
LOY45_RS11815 NONE
LOY45_RS11820 NONE
LOY45_RS11825 NONE
LOY45_RS11830 2535784 .. 2535823 +  -8.4  -3.05844   GGCGACGGCCAGCAA  CAGGCAAGCGCTGGCGCCG CAA CGGCGCCAGC-CACGGATG  TGTTGCGCTGCCAGC  57 82
LOY45_RS11855 2539251 .. 2539268 +  -5.5  -3.59979   TTGACGCTTATCCAG             TTGCTGG TCGA CCAGCCA              TTTGCCGTGCGCCAG  57 69
LOY45_RS11875 2543277 .. 2543289 +  -2.6  -3.86897   GGTGCTTCATGCGGC                CGTC GCTCA GGCG                TTTCTGGAAGGTGAC  55 363
LOY45_RS11890 NONE
        cobF 2546809 .. 2546819 +  -3.2  -4.49311   GATCCACTGGGCCAT                 GTAC TGG GTGC                 TTTTGTGCTGGTGGT  69 60
LOY45_RS11910 NONE
LOY45_RS11915 NONE
LOY45_RS11920 NONE
LOY45_RS11925 NONE
LOY45_RS11930 2555391 .. 2555409 +  -5.2  -2.75074   GCTGACACTTCCCAC             GCCATCGA GCA TGGGTGGC             TGATGTTCCCCTCCG  47 47
LOY45_RS11935 NONE
LOY45_RS11940 2557935 .. 2557961 +   -10  -3.39668   GAGCATGCTTTCCAT         TAGCGCCAGGCC CTG GGCCTGGGGCAG         TTGTGAGGTTTGCAG  67 96
LOY45_RS11960 2562054 .. 2562070 +  -2.1  -3.68222   GCGACGCGTTCAGGG              CGCCATC CTG GTTGCCG              TTGTTGACCTTGACC  50 359
LOY45_RS11980 NONE
LOY45_RS11985 2566853 .. 2566872 +  -7.2  -3.28791   GTGCGGCCTCGTGGC            TGGCCGAAC CCA GTT-GGCCA            TTGTCCCAGGCCAGT  54 307
LOY45_RS11995 2569429 .. 2569445 +    -3  -3.15861   ACCAACAGGGTTTCC             CA-GGCA AAAC TGCCATG              TTGGTAAAGCTCATG  43 424
        hppD 2572934 .. 2572959 + -15.5  -6.40073   CATCGCTACTGAAAA         GGCCATTGGGC GTAT GCTCAATGGCC          TTTTTTTTTTAGGTT 100 45
LOY45_RS12015 2573551 .. 2573570 +  -3.4   -4.5528   GAGCGCAACGTAGGG            CCGTATGC TGGA GCGAGCGG             TTTTGGTTCCTTTTG  67 225
LOY45_RS12030 NONE
LOY45_RS12035 2578158 .. 2578172 +  -5.6  -3.61178   GTAGCCAATCAACGC               GGCAAG CAG CGTGCC               TTTGCCGTAAGTCCC  57 112
LOY45_RS12080 NONE
LOY45_RS12085 2593672 .. 2593684 +  -4.7  -3.16881   GCCGTCATGCAGGTA                CCCGG CGC CGGGG                TTGATCCGCTCGATC  47 193
LOY45_RS12130 NONE
LOY45_RS12135 NONE
LOY45_RS12140 NONE
LOY45_RS12145 NONE
LOY45_RS12150 NONE
LOY45_RS12155 NONE
LOY45_RS12160 NONE
LOY45_RS12165 NONE
LOY45_RS12170 NONE
LOY45_RS12175 2623902 .. 2623912 +  -2.4  -4.18197   GCGTCCGTGCGGGTA                 CCGG ATC CCAG                 TTTTCGCTAGACACT  56 254
LOY45_RS12190 2626202 .. 2626218 +    -5  -2.58544   CATCAATCAGGTGGG              AGCGGG CTTGC CCCGCG              ATTCTGACCATGAAA  46 65
LOY45_RS12195 2627017 .. 2627069 +  -9.2  -2.62184   TGCCGTCACGAAGTC GGCCGCTGGCACGGCCTCGAA AAGGCACACGGC TTCGGGGCCGTGCAAG-GGCG TGCTGTGAAGCCGAA  59 183
LOY45_RS12215 NONE
LOY45_RS12220 NONE
LOY45_RS12225 2633580 .. 2633605 + -20.5  -4.46267   GGCGAGGTCGGCCCA         GGCCGCCTTGC CCAA GCAAGGCGGCC          TTTTCATTGCGTTGT 100 49
LOY45_RS12235 2635581 .. 2635595 +  -5.6  -3.03124   GCTCTGCGAAATAAC               CGGTGT ACA ACCCCG               TATTCGAGAATGGCA  48 374
LOY45_RS12260 2641776 .. 2641795 + -10.7  -5.30686   AGCCACAGCCGCCAA            GCCCGAG CATTGA CTCGGGC             TTTTTTGTGGGTATT 100 55
LOY45_RS12265 NONE
LOY45_RS12270 2645448 .. 2645470 +  -6.8  -3.14132   ACGCCGAAATCGGCT           CGACGCCGGC AGC GCTGGCGCCA           TTGCTGACCGAGGGC  54 336
LOY45_RS12280 2649126 .. 2649151 +  -8.2  -3.21416   GCAGCAGAAATAATC         GCGGCCTTGG GGATAG CCACGGTCGC          TTGCTGGTCAAAGTG  60 28
         pgm 2650880 .. 2650937 + -16.5  -3.02144   AGCATCGCTGGCAAG CCAGCTCCCACAGGTGTTGTAAATATCT GAG AGATATC-ACCTGACCTGTGGGAGCTGG TCTTGCCAGCGATGG  87 49
LOY45_RS12295 2654716 .. 2654739 +   -11  -3.72576   GTGCCTCCTAGGCCA          GGCTGGCGTT GTTC AGCGCCAGTC           TTTCATCGGCCACCC  80 376
LOY45_RS12310 NONE
LOY45_RS12315 NONE
LOY45_RS12320 NONE
         rpe 2661408 .. 2661424 +  -6.5  -3.35522   CCACGCTTTGCCCAA              CCGCC ACTGATA GGCGG              TCTTTCCAACGATTC  56 16
        hemE NONE
LOY45_RS12335 2663226 .. 2663243 +  -9.1   -3.2396   CTGCCAGTAACCACC             CTGGCGA ACCA TCGCCGG              TTGCTGCTGGTCATT  62 292
LOY45_RS12355 NONE
LOY45_RS12360 2670527 .. 2670549 + -13.4  -2.64803   CGCGCACTTTGCGTT           GCTGGGCCAG GGA CTTGCCCAGC           TGGGTTTGCCAGTAA  67 397
LOY45_RS12380 2674334 .. 2674356 + -14.9  -4.19483   GCTGACACTTGCACC           GAACCCGCC CTGGA GGCGGGTTC           TTTCTCTCTCTCTCC 100 139
        ilvA 2675938 .. 2675951 +  -5.9  -3.16881   ACGAAAGCGACAACC               CGGCC TACC GGCTG                TTCCTCGGCTGACTC  52 0
        yiaY 2677228 .. 2677252 + -11.5  -2.52543   ATCGCTGGCAAGCCA          GCTCCCACA CCGAACC TGTGGGAGC          TGGCTTGCCAGCGAT  67 70
LOY45_RS12405 2680557 .. 2680571 +  -7.1  -2.94099   GTCATAGTGCTTGCA               TGGCG CCAAT CGCCA               TCTATGCTCAGCAAA  53 72
LOY45_RS12410 2682006 .. 2682026 +  -8.9  -3.14881   CTGCAGTTGCTCGAT            GCCGGCGTC GCC GATGCAGGC            TTGCTCGAGCGCTTC  57 102
LOY45_RS12465 2700561 .. 2700572 +  -2.2  -2.64155   GTCAGGCGCCCCGGA                TGGC CTGA GCTA                 TACATTTGAAGAAAA  38 99
LOY45_RS12470 NONE
LOY45_RS12475 2703568 .. 2703581 +  -2.3  -3.72968   AGGGTTGTGCATACC               CCAGA CACA TCAGG                TTTAACTGTACTGAT  51 87
LOY45_RS12480 2704177 .. 2704211 +  -2.7  -3.14229   CTCGATCGCTGGCAA     CGCCAGCTCCCACAG GTCCA TTGTGGGAGCAACTG     TCTTGATCAGGCTGT  43 97
LOY45_RS12500 2710132 .. 2710146 +  -2.1  -3.40592   AATTTCGGCTGAGAT               GTGAT AGCAG ATCGC               TTGGCTTTTCCTATA  46 55
LOY45_RS12585 2731353 .. 2731377 +    -2  -3.61983   GTCGGTAGTTATGTA         GCGCCAAAAGC CTGG GCATC-GGCGC          TTATCTGTAGGTTCA  48 48
LOY45_RS12590 2736657 .. 2736682 + -13.4  -4.62069   ACTGACGGTGCTGGT         CTCCTGACAG CCCCCA CTGTCAGGAG          TTTTTCCGATGACAC  95 67
LOY45_RS12595 2741801 .. 2741845 + -17.9  -3.57144   TGTAAGGTTGTAGAA CGGCCTTGCCTCCCGCTGG CGCAATT TCAGCGGGAGGCAAGCGCG TTTGCAGGTGCCCCG 100 36
LOY45_RS12605 2744346 .. 2744385 + -18.7  -3.02144   GGCTTCGCTGGCAAG  CCAGCTCCCACAGGGAT TGCACC ATTCCTGTGGGAGCCGG   TCTTGCCGGCGATGG  95 56
LOY45_RS12610 2745929 .. 2745952 +  -2.4  -4.11216   GGATGGGCAGACAGG          TTTGC-AGCGA ATA TCGCTTGCAGC          TTTTGCGGGTCCAGG  58 175
LOY45_RS12630 2750039 .. 2750050 +  -4.4  -4.08767   GCGATTCGCTCTTGA                GCTT GGCG AAGC                 TTTTGCGCAGGTCGC  61 42
LOY45_RS12640 2751573 .. 2751600 + -10.6  -3.53012   TGCACACTAGGCTCG        CTCGGTCACTGA ATGT TCGGTGATCGGG         TTTGGCGACCCGGAC  72 240
LOY45_RS12645 2752092 .. 2752135 +  -9.5  -2.82558   TCGGCGTTGCCTGGA TCGCGGGGCAAGC-CTGCTC CCACC GGGTGGTGCTGACCCCGCGA TGATGTTAATTCTGT  63 42
LOY45_RS12650 2752896 .. 2752913 +  -4.1  -3.37344   GCCCCATTCAACGGC             CTGTTCG CCCG TGAGCAG              TTCATTGCATAGCAA  49 383
LOY45_RS12670 2757255 .. 2757280 + -17.7  -2.58822   CTGAACCCTCGCTGT         GGCTGGACATC GAAC GATGTCCAGCC          CTATTGTCTGGCCAG  86 37
LOY45_RS12675 2758068 .. 2758095 +  -6.2  -3.05816   GGCGCCGGGCTATCG        CGACTGATCAGC AGTT GTTGTACAGTCG         TTCAATACGCAATCC  52 19
LOY45_RS12680 2758949 .. 2758960 +  -3.6  -2.71712   TCAGTAATGGGTACG                CTGC TGTC GCGG                 GTTTCACAACAACAC  42 49
LOY45_RS12685 NONE
LOY45_RS12690 NONE
LOY45_RS12695 2762828 .. 2762840 +  -6.2  -3.05066   AATAATCGACGGCAA                CCGC TGCCC GCGG                TCTTCGAAGCTTATT  51 109
LOY45_RS12700 2764356 .. 2764409 + -30.5   -2.5955   GTCGGTGTAAGCCCA TCGCGGGGCAAACTCGCTCCTACCT GTAA ATGTAGGAGCGGGCTTGCCCCGCGA TAGGTTGTACAAAGT 100 31
LOY45_RS12705 NONE
LOY45_RS12710 2766588 .. 2766605 +  -4.1  -3.01924   CGCCCGCTGTTGCGC             TGATCAG GAGC CTGCTCA              TGTTACGAGACAATC  44 23
LOY45_RS12715 NONE
LOY45_RS12720 2770305 .. 2770324 +  -2.8   -5.0133   CTCAAGCACGCTTGC            GCGCGCTGA GCT TCAAC-CGC            TTTTTTGGGAGACTG  77 17
LOY45_RS12725 NONE
LOY45_RS12730 2772943 .. 2772970 + -11.2  -3.43288   TATTCAGCTCTGAAG        TGGCGGGCAGGT TCAG GCCTGCCCGACG         TTGTCCTGCGGTTTG  75 28
LOY45_RS12740 2775206 .. 2775233 +  -7.6   -4.3255   CGAGCGCTGGTGGCA        GGCGTAAGCCGC ACGA GCGGATTGCACC         TTTCTTGGTTGAGCC  74 19
LOY45_RS12745 NONE
LOY45_RS12750 NONE
LOY45_RS12755 NONE
LOY45_RS12760 NONE
LOY45_RS12765 NONE
LOY45_RS12770 2782477 .. 2782494 +  -3.4  -3.79113   ATCTGGCGGTGCCCT             CGATGG CTACCA CTATCG              TTGTTGTAAGGCGCT  54 325
LOY45_RS12780 2784262 .. 2784276 +  -7.8  -3.29144   GACTGGTTGCGCCAA               GGCTGA CCC TCGGCC               TTGTGGAGGCCCTGA  59 20
LOY45_RS12785 2785433 .. 2785449 +  -2.9  -3.31792   CCGCGGCTTCGATCA              CGGTTTC GTT GAGGTCG              TTGTGCGGGTGCTCG  47 412
LOY45_RS12845 NONE
LOY45_RS12850 2797005 .. 2797027 +  -2.6   -3.0644   AGGCCATTGCTGCAG           CGCTAGGC CGCCCGC GCCTGACG           TATTGGCAGTTCGAT  42 410
LOY45_RS12880 2806842 .. 2806861 +  -4.9  -3.16683   GAACTGGTATTGCCT            GCCGTTG CGCAAA CCACGGC             TTGATACGGTGGAGT  47 2
LOY45_RS12885 NONE
LOY45_RS12890 2809165 .. 2809182 +  -5.5  -2.57647   GGCGTCAGCAGCGCC             GGCGC GAGGATGG GCGCC              ATTGATGTGCTGGCT  46 3
LOY45_RS12895 2809742 .. 2809755 +  -4.5  -3.78022   AGGCGCCGTTGATCT               GCTAG TCTG CTGGC                TTTGATCCGTGTGCA  57 39
LOY45_RS12900 2810751 .. 2810767 +  -5.1  -3.59979   TACGCCGGTTGCAAT              TCGCTGT CGA GCAGTGA              TTTGACCTCGGCAAA  56 45
        moaB 2812768 .. 2812807 + -10.1  -3.06162   CTCATCGCTGGCAAG  CCAGCTCCCAC-AGGT ATTGCGCCG ACCTTGTGGGAGCCGG  TCTTGAACTGGCCTA  66 406
LOY45_RS12915 2814266 .. 2814305 + -14.4  -3.02144   CTCATCGCTGGCAAG  CCAGCTCCCAC-AGGTC TTGCGCC GACCTTGTGGGAGCCGG  TCTTGCCGGCGATCG  80 267
LOY45_RS12930 2819070 .. 2819087 +  -8.3  -3.88291   GCCATTTACCGGCGG             CCGCAGG TGGG CCAGCGG              TTTCTCGGGATACTG  71 90
LOY45_RS12935 NONE
        cydB 2821653 .. 2821676 +   -16  -2.60194   TTTACTGCGAAACGT          GCGCCTGCCA TTGA TGGCGGGCGC           CTTGCTTGCCAGCCT  82 166
LOY45_RS12945 NONE
LOY45_RS12950 NONE
LOY45_RS12955 NONE
LOY45_RS12960 NONE
LOY45_RS12965 2827104 .. 2827157 +  -4.3  -3.57807   GCGAGCCTGGGCTGA GG-TGGCCGATTGCGTCCCCGGCCAC GGG GACGCAATGGACGAAAACGGCCAACC ATTTTTCGTTGTGTT  54 26
LOY45_RS12970 2827970 .. 2828017 + -16.2   -3.8046   TCGAGTCCGCCTAAG CCTTGCCCTCGGTGTGCTGCGC CCGT GCGCGGCACATCCGGGGTGCGG TTTGCCCTTTTTGCA 100 27
LOY45_RS12975 2828587 .. 2828601 +   -10  -2.77899   GCCTGAGTAGTGGCA               GCAAGC ACC GCTTGC               TCATTGATGGCCAGG  59 125
LOY45_RS12990 2831173 .. 2831186 +  -9.5  -4.63218   GAAGTGCGACAGCTC               GCGGC CAAA GCCGC                TTTTCTTCACGCCGC  88 104
LOY45_RS13000 2833473 .. 2833506 +  -2.3  -4.09243   GCGAGGTGCTCAAGG     TCGAGGAGGCGCA GTGAAGTG TGCGGCGCCTGGA      TTTTCGAGCGCTGTG  56 9
LOY45_RS13010 NONE
LOY45_RS13015 2835360 .. 2835392 +    -7  -2.53263   CGGGTTGCACCCGAT     GCT-CGGCGGGCACCG AGG CGCTGCC-GCTGGAGC     TGACTTCGGCCTGAC  47 511
LOY45_RS13025 2837366 .. 2837415 +  -7.5  -3.30124   GAGGGAACACCAGCT CCAGCGTCGCCACCCCCTGGGCG CTGC CGCCGAGGGTGACGTTGCGCAGG TTCTGCGAGATCAGC  58 401
LOY45_RS13070 2848031 .. 2848054 + -13.2  -2.50113   TCAAGGCGGTATTGA          GCGAGTGAGCG GGG CGC-CACTCGC          GTTGGTGAAATAGTG  72 18
LOY45_RS13075 2848875 .. 2848898 +  -2.4  -3.81146   CTCCACCGGCATCGG          CTGCAGGT-CT TCC AGTATCCGCAG          TTGTTCCTTGACCGC  53 200
LOY45_RS13085 2850796 .. 2850829 +  -7.3  -3.14132   GGTTGAAATAGCGAT     GGCCGCGACCA-CGCC GAT GGCGCTGATCTCGCCC     TTGCTCAGGAACGGC  55 212
LOY45_RS13100 NONE
LOY45_RS13110 2857195 .. 2857212 +  -3.5  -3.09491   TGACCCGGGTTGCCC             GC-TCATT GAC AATGAAGC             TTCCGTGAATCTATC  46 44
LOY45_RS13115 2858301 .. 2858331 +  -6.1  -2.72661   GGCCAGGGCCCATTG      GGTGAGCGAC-GAC GTAT GCCAGTCGCTGACC       TGCTTGGCCCTGATC  46 424
LOY45_RS13130 2861446 .. 2861464 +  -5.9  -2.78596   TCCAGCAACAAGATC             GGCCAGG CCGGT CCTGACC             TGTAGTGAAGAGGTC  49 9
LOY45_RS13135 NONE
LOY45_RS13140 2866159 .. 2866194 + -12.6  -4.64144   GCACTAGTGGCCGGG    CGCCAGGCCGA-AAGCC GGT GGCTCATTGGTCTGGCG    TTTTTCCCGGTTATT  95 34
LOY45_RS13145 2867022 .. 2867040 +  -3.9  -3.72576   CAGTTGGGAGAGCTG             TTGAGCT TCTGC AGTTCAA             TTTGCTCGGCGGCAC  55 335
LOY45_RS13160 2869002 .. 2869060 +  -8.7  -2.63723   ATCGGCGTGCTTTTC GTGTCGCAGGTCTGCGGCGAGTCGATCA AGGC TG-TCGACTCGAAGCCGGCCGGCGGCGA ATTCATTGATGGCCC  59 428
LOY45_RS13195 2878108 .. 2878152 +  -3.9  -3.16564   GTCAGAAAGGATGAC AGCGCGCTCGGGCAGGGCTGG TCC CTGGCCCCACTGGGTCGCGCA TTGATGGGCTGGGCG  46 151
LOY45_RS13200 2881216 .. 2881251 +  -6.8  -2.57132   TGAGTGCCCAGCCGA    TGCCGGGTGC-TCAAGC AGT GCATGGTGCAGCTGGCA    ATTCTGCGGGCGGAG  50 68
LOY45_RS13210 NONE
LOY45_RS13215 2884426 .. 2884443 +    -4  -3.30243   CCGGCAAACAAATGC             CCGACC AGATCC GGGCGG              TTGTCGCGGATCGCT  49 270
LOY45_RS13225 2886453 .. 2886469 +  -6.5   -3.0464   GGTCCGTTCGCCGGG              CGCGC AGGGAAA GCGCG              TGTTGCGAATGGCTT  51 388
LOY45_RS13235 NONE
LOY45_RS13240 2888335 .. 2888351 +  -4.3  -3.62522   GCGTCAGATTGCGCA              GGGCGTG ATT CATGCCG              TTGTTGGCCAGGTTG  53 340
LOY45_RS13255 2892110 .. 2892125 +  -4.6  -3.05463   CAAGCAGGCCGACTA              TCGCCC GTCC GGCCGA               TTGGCTGGCGCCCAT  47 298
LOY45_RS13265 2896629 .. 2896639 +  -6.8  -3.57783   GGGCCGCGGCCACCA                 GGTC CTT GACC                 TTGTCGTTGTGGTAG  59 474
LOY45_RS13300 2903587 .. 2903602 +  -7.6  -3.38272   AAAAAATCCGAAAAC              CTAGAG AACT CTCTAG               TTATGCCTCGTCGTG  61 46
LOY45_RS13305 2904592 .. 2904619 +    -9  -3.33265   ACCATGCCAGTGTCC        AGGCGGTTGGCG ATCG CGCCAGCCGGCA         TTAAATTTGTACCGT  65 55
LOY45_RS13310 2905644 .. 2905661 +  -9.9  -2.56596   CGCTAGCCTGAAAGT             TCTCCTC TAGG GAGGAGA              TCAATTGATCAAAGG  62 84
LOY45_RS13315 2907195 .. 2907214 + -12.1  -3.89614   TAGAGCGAAATGAAA            GCCCGGC TTGAAT GCCGGGC             TTTCTCAGGGTTGGC  85 38
LOY45_RS13350 2913305 .. 2913316 +  -2.2  -3.21593   TCGTCCAGCGAGCAC                GC-CC AAC GGAGC                TCTTCTAAGGCAATG  44 477
LOY45_RS13365 2917436 .. 2917455 +  -5.8  -3.78329   AGCAACTCACTTGCT            CAGAC-TTC GAT GAACGTCTG            TTTGGCTTGGTGCGC  61 96
LOY45_RS13385 2921234 .. 2921254 +  -5.3  -3.83026   CGCCACCGCGCCAGC            GGGCGTTCG CCG CGAACGGAC            TTTGCTGTAGCCGCC  60 328
LOY45_RS13400 2925619 .. 2925644 + -12.1  -3.35679   AAGCTTAAAATATAA         CTCAACTAAAT AACT ATTTAGTTGAG          TTATAAGTGACGAGC  77 74
LOY45_RS13405 NONE
LOY45_RS13410 NONE
LOY45_RS13415 2928179 .. 2928226 + -41.6  -2.91199   AACCCTTAACAGCAA TGGGGCCTCTGCCTCCAGCGGG TTTA CCCGCTGGAGGCAGAGGCCCCA TGTCGTTGAGGCTTG 100 39
LOY45_RS13480 2940224 .. 2940255 +  -6.4  -2.83271   CGGCAACCCCAGTGT      TCCCCAACGCCGCG ATGA TGCAGCGTGAGGGA       TCGTTGTGCCCGTAA  49 108
LOY45_RS13485 2940708 .. 2940738 +  -7.6  -3.37464   CTTGGACAGAATGGC      GATCT-GGCGGTC GTGCAG GGCCGCCTGGATC       TTCTCCACTTCGTGC  58 117
LOY45_RS13495 2943099 .. 2943122 +  -6.6  -2.57211   CTCGCTGCTCTGCAA          TGCCGCGGCA ATGG TGTCGAGGCG           GTTGTCCGGCAGGGT  47 154
LOY45_RS13540 2962001 .. 2962031 +  -6.6  -2.73364   GGTGTGCAGCCAGCC       GCCGGCCCAGAGTG CGG CCCCCTGCTCCGGC       TCCTTGAGGTAGCCC  48 499
LOY45_RS13580 2974208 .. 2974225 +  -2.7  -3.23853   TGAAGCCCACCGCTG             C-CAGTTC CTT GAGCTGAG             TCTTCATTCCCAGGG  44 316
LOY45_RS13620 2982133 .. 2982156 +  -2.4  -3.45134   GCCCTCAGGGCGATT          GGCCAC CAGGTCTGAGCA GTGGCC           TTATCAATTGATTGG  46 11
LOY45_RS13625 2983296 .. 2983312 +  -3.5  -3.55444   CGCCGAGCTGACCCT              GGCCAGC CCT GCCAGCC              TTTGAGCCCTACCCC  52 4
LOY45_RS13630 2985057 .. 2985078 +  -8.7  -2.87344   AAGGAACACCGCAGT           GCC-CTGCAC CCG GTGCGGCGGC           TGTGTGGCCAGGCTG  55 478
LOY45_RS13650 2989567 .. 2989600 +  -6.7  -2.70932   CCGTTCCAGGCGCAG     TTG-GGTCAGCCATTG CTG CGGTGGCAGGCCGCAA     TGGTTGCGAAAGCGG  48 242
LOY45_RS13690 2996862 .. 2996872 +  -2.4  -3.62224   TGACCGGATCATGTT                 CACG TTG CGGG                 TTGTTAAGCGGATCT  50 174
LOY45_RS13700 2998053 .. 2998100 +  -7.7  -3.53811   AGCATCGCGGGGCAA GCCCGCTCCCACAAGGGATCGGT GTAC ACCTGAC-CT-GTGGGAGCTGGC TTTGCCGGCGATGCA  61 49
LOY45_RS13745 3008096 .. 3008112 +  -3.7  -3.21276   CCCTCGGCCAACGCT              GGCATAA AGA TTATGCG              TGTTGTGAACCGCAG  47 119
LOY45_RS13760 3011234 .. 3011247 +  -3.8  -3.53012   CCGGGACGGAAGGCG               GCCT GCAGGA AGGC                TTTGGCGGCGAACCC  51 425
LOY45_RS13775 3014736 .. 3014792 + -36.8   -3.6502   TGAACTGAGGCACCC CCATCGCGGGGCAAGCCCGCTCCTGC AATAG GTGGGAGCGGGCTTGCCCCGCGATGC TTTAAATCGGAGGTG 100 33
LOY45_RS13780 3015909 .. 3015919 +  -8.2  -3.35996   CCTTGAGCCTCATCG                 GCCG CAC CGGC                 TTGTGCATCAGGGTG  62 71
LOY45_RS13800 NONE
LOY45_RS13805 3024691 .. 3024711 +  -6.1  -4.36914   ACCGCCTCGTCGTGG            TCCTTGCTG TTG CGGTAAGGG            TTTTCTGCGCGCCAC  73 378
        exaA 3027020 .. 3027060 + -14.8  -2.52543   TCGCCGGCAAGGCCG GCTCCCACAGTGGATCGGT GCAT ACCAAACC-CTGTGGGAGC  TGGCTTGCCAGCGAT  80 53
LOY45_RS13820 3028155 .. 3028172 +  -4.7  -2.90496   GCAGTTGCGGCAGGC             GCTGGCG CAGG CGCCGGG              TGGTTTCCAGGCCGC  45 438
LOY45_RS13830 3029464 .. 3029489 + -21.9  -4.35524   CACGAGAATACTCAA         CCCCCGGTCGG CCCC CCGACCGGGGG          TTTTGCGTTTCAAGG 100 296
LOY45_RS13835 3030810 .. 3030859 + -13.5  -3.25823   CGGTTGTGAGCCTTA TCGCGGGGGCAAGTCGGGTCGCCG CAC CGCCCCTCCCACTTGCCCC-GCGA TTACTATCAGCCAAC  81 32
LOY45_RS13840 3031218 .. 3031234 + -15.1  -4.15222   TCGCTGGCTGACAAG              CCGGCCC TCA GGGCCGG              TTTGTTCACCCGAGT 100 41
LOY45_RS13845 NONE
        yejB NONE
LOY45_RS13855 NONE
LOY45_RS13860 3036658 .. 3036673 +  -7.6  -3.39803   AATAACTGGAATCAA              GTCTCT TATT AGAGAC               TTATGCCTATCCCTA  61 36
LOY45_RS13865 3038299 .. 3038315 +  -2.9  -3.53091   GGTGATTGCTACGTT              CTATGCC ACC GGTATCG              TTTAAGGAGCACCCT  48 4
        hbdH 3039099 .. 3039132 +  -3.7  -4.15748   GGCTGGCTGGCCCAG     TGACG-GGCAGCCTGG CAA CCTGGCTGCGGCATCG     TGTTTTTTGACCTGC  60 23
         eco NONE
LOY45_RS13880 3041738 .. 3041749 +  -4.4  -2.53876   ATGCGCGGTTTTTAC                CCTT TGCG AAGG                 TAGGTTGAGATGAAA  43 40
LOY45_RS13885 3042436 .. 3042465 +  -4.9  -3.78193   GGCAGTAGCGGCCAT       TCGCCACCTAGCA TTTT TGCCAGTTGTCGA        TATTTCTGTTTGCTC  57 427
LOY45_RS13895 3045153 .. 3045179 +  -5.7  -3.05384   CCAGAACTCCTGGCG        CGCCAGGCGCAG CGTA CCGCGGC-GGCG         TTCGCTGACCAGCGC  49 313
LOY45_RS13905 NONE
LOY45_RS13910 3047398 .. 3047446 +  -5.2  -3.58269   CGCAAGTCGGCCCAA CGGCGGTAAGGGCT-ATCGGCATG CAG CAGGCCGATCAGCCCCC-CTGCGG TTTCGACCTCGATTG  55 268
LOY45_RS13920 3048492 .. 3048508 + -13.7  -2.70932   GGACTTGCCCGCGAT              CGACCGC GCA GCGGTCG              TAGTTCAGGCAACAC  75 82
LOY45_RS13925 3049163 .. 3049216 + -10.4  -3.33261   GGCAGCATGTACAAC CGGCCGAGACGATTGTGGGTGTGCAC CACG GTGGACAC-CACGATC-TCGCGGCGG TTGTCGGCGTTCAAG  67 114
LOY45_RS13940 3051053 .. 3051069 +  -4.3  -3.23183   ATGAAGTTATCTGCC              GCCATGC ACG GCGTGGG              TTGACTATTCTCTGC  49 37
LOY45_RS13960 NONE
LOY45_RS13970 3055593 .. 3055608 +  -5.4  -3.93695   ACTCCTTCAGCATTT              TGCGAG CAGC CTCGTA               TTTATACATAATACC  60 505
LOY45_RS13980 NONE
LOY45_RS13985 3057160 .. 3057171 +  -2.2  -2.87132   TATATCCTGAACGGC                GTTG GAAT CAGC                 TGTATCCCGACAGCC  39 139
LOY45_RS13995 3057838 .. 3057853 +  -4.7  -3.36785   CGGTTACTTCGACCA              CGCTT CTGGTA AAGCG               TTACTTCGCCTATCG  51 199
LOY45_RS14010 NONE
LOY45_RS14015 3062809 .. 3062826 +  -7.7   -3.8211   GTGACCGGCAGTTTG             CGCGCCAG GGC CTGG-GCG             TTCTTGTCGATGGCC  67 248
LOY45_RS14030 NONE
LOY45_RS14035 3065956 .. 3065983 + -11.2  -3.29144   AACCTTCTCCGGCGT        GCGCCAGGCCTG GTTG CGGGCCTGCTGC         TTGTCGCGCCAATAC  68 228
LOY45_RS14050 3069302 .. 3069314 +  -6.9  -3.63645   GCCTGGCATACGGCC                TCGGC CTG GCCGG                TATTATTGTTGTTGC  60 368
        pnuC NONE
LOY45_RS14070 3077421 .. 3077447 +  -4.3  -2.56596   CGCTTGCTCAAGGTA         TAAATGGCCGC CCAAT GCGGCCAGATG         TCCATTCCTGAAACA  43 23
LOY45_RS14075 NONE
LOY45_RS14080 NONE
LOY45_RS14085 3080380 .. 3080397 + -14.1  -5.08824   TTGCCGTGGCCTGGA             GGCCCCC TTCG GGGGGCC              TTTTTTCACTACCAG 100 41
LOY45_RS14090 NONE
LOY45_RS14095 3081886 .. 3081900 +  -4.2  -2.80443   TCGCACTCTCGGATT               CTGATC TAC GCTCAG               TCTCATCAAATGTAG  44 22
LOY45_RS14100 3083224 .. 3083239 + -11.8  -3.49777   ACTTCTAAGCAAAAA              GCCCGC TTCG GCGGGC               TTGTGGTATCTACCA  78 33
LOY45_RS14115 3086854 .. 3086878 +  -4.2   -5.1356   TATAACTCGCTGGAC          AAACTGCGAC ACTTG GCCGCAGTTG          TTTTTATTGATACCA  81 94
LOY45_RS14140 NONE
LOY45_RS14145 NONE
LOY45_RS14150 3095350 .. 3095366 +  -4.3  -2.65766   TGGCATTGGCCTGCA              CCAGCGG TTT TCGCTGA              TAATCTGCACTTTCC  43 9
        cobM NONE
LOY45_RS14160 3096446 .. 3096459 +  -6.7  -3.05384   GAGGTAAACCTGACT               GGCAA GGCT TTGCC                TTGCATCGCCGGCAA  54 39
LOY45_RS14165 3098409 .. 3098422 +  -6.7  -3.05384   GAGGTAAACCTGACT               GGCAA GGCT TTGCC                TTGCATCGCCGGCAA  54 125
        gspG NONE
LOY45_RS14275 3122403 .. 3122437 +  -9.9  -2.82015   TTTGCCGGCCTCACT     GCGGGGCCGACCATG CCTGA TATTGCCGGCTCCGC     TGTCGTCACTCTAAA  63 198
LOY45_RS14280 NONE
LOY45_RS14285 3123792 .. 3123805 +  -8.1  -2.52543   CGTAATACTGCACCG               GCTCC TGTG GGAGC                TGGCTTGCCAGCGAT  55 36
LOY45_RS14300 3126873 .. 3126895 +  -4.7  -3.56643   GAGGCTGGCGCAAAC           CCGGTCGCG CCGCT CGCGGTAGG           TTTCGCGCATCTGCC  54 302
LOY45_RS14310 3128541 .. 3128562 +  -8.7  -2.82635   AGCGCGACAATCGCC           GAGACGATG GCGG CATCGTCGC            TGTCCTGCTCCAGGT  55 219
LOY45_RS14360 NONE
LOY45_RS14365 3146617 .. 3146633 +  -7.9  -3.10895   CATCGCCGGCAAGGC              CGGCTCC CAC GGGGCTG              TGTGTCTGTCTTGCG  57 124
LOY45_RS14370 NONE
LOY45_RS14375 3148071 .. 3148093 +  -3.2  -2.82623   ATAGAAGCCCGCCTG           GGCCGCCACC TGC GCTGACCGCC           TGCTTGTGAGGAACG  41 8
LOY45_RS14380 3149407 .. 3149419 +  -4.8  -3.14132   CTTGCTAGCCCTTCC                CCTG CCCCT CAGG                TTGATCCACGCAAGA  47 77
LOY45_RS14385 3150273 .. 3150289 + -13.7  -3.82604   GGCCTTGCCGGCGAT              GGGCTGC GCA GCAGCCC              TTGTTCATTGCCTGG  88 136
LOY45_RS14390 3151991 .. 3152019 +  -7.2  -3.46509   GTATAGGTAGCAAGC        GGCCAGCGCGCC AAAAC GGCGCTCAGGGC        TTGATGTTCTTCAGG  61 501
LOY45_RS14405 3153755 .. 3153767 +  -3.3  -3.33815   CCTTGCCATCCGAGC                GCCAG CCG CTGCC                TTCATTGGCACCGGT  47 163
LOY45_RS14420 3155887 .. 3155897 +  -2.4  -3.14132   GAATCAGGAAGGTCA                 CCAG CAT CAGG                 TTGGTCGCCCCGGCC  42 242
        gcvA 3157663 .. 3157673 +  -3.2  -3.53811   GCTGGCTTGTCGCTA                 GCAG GGA TTGC                 TTTGCAGCCCATCGC  48 25
LOY45_RS14455 3164042 .. 3164067 +  -9.7  -3.39327   CGACTTTCTCGGTGC         TCA-CCCGGGCG AAG CGCCCGGACTGA         TTGTAGGTCTCGACC  64 419
LOY45_RS14485 NONE
LOY45_RS14490 3170760 .. 3170774 +  -2.7  -3.53012   ACAAGCAATCACCAC               CAGCC AGGGC GGCAG               TTTCCAGAACAGCAG  47 69
LOY45_RS14525 3179397 .. 3179422 +  -6.1  -3.61517   CAAGTCCCGCTCCTA         CAGGTGTAGCG CTAC CGATACAGCTG          TTCTTCCCCCGGGCT  58 133
LOY45_RS14535 3181630 .. 3181683 +   -10  -2.87564   TGGTGCTCAGCGTCA CACTGGGGCGCGAGGTCGGGCCGC TCAATT GCAGCAGGCCTTCGAGCCCCAGGG TCTGTGGCAGGGTCG  60 126
LOY45_RS14545 3182960 .. 3183007 +  -9.1  -4.18018   GGGCGTAGATAGATT G-ATCGCGGGGCAAGCCCGTTCC CACA GGATTGCGCG-GCCCCGCGATGC TTTTGGCTACACCGG  75 29
LOY45_RS14595 NONE
LOY45_RS14600 NONE
LOY45_RS14605 3192975 .. 3192985 +  -8.2  -3.30771   GCCGGGGGTTCAAGG                 CCCG GTA CGGG                 TTCTGGAAGATGTAC  60 507
LOY45_RS14645 NONE
LOY45_RS14650 NONE
LOY45_RS14655 3206057 .. 3206067 +  -6.8  -3.40403   TGGGAGCTGGCTTGC                 CAGC GAT GCTG                 TTGTGCTGCAACCGC  58 113
LOY45_RS14660 NONE
LOY45_RS14665 NONE
LOY45_RS14670 3209603 .. 3209619 +  -7.9  -2.70932   GGACTTGCCGGCGAT              CGAGCGC GAA GCGGTCG              TAATTAGGCCGACAC  53 125
LOY45_RS14675 3212238 .. 3212250 +  -3.3     -2.55   TCGCTGCACCTCTTT                CGCCT TAC AGGAG                TCCGTTGCCATGTTC  39 41
LOY45_RS14680 3214750 .. 3214788 +  -9.6  -2.52543   ATCGCTGGCAAGCCA  GCTCCCAC-AGGTACAG CATGCA CCGAACCTTGTGGGAGC   TGGCTTGCCAGCGAT  62 56
        metH 3222793 .. 3222844 +  -7.3  -3.12999   AGCTGCAAGCTACAA GCTGCAAGCGA-GCGCATCAGCCT CTTGT AGCTTGAGGCTCATAGCTTGCAGC TTCCGTCTACACTGA  57 48
LOY45_RS14705 3223115 .. 3223143 + -17.5  -3.92592   CCGCTGAACAGCAGT        CCGCCCGCAGA TGTCCAT TCTGCGGGCGG        TTTACTGTTACCCAT 100 34
LOY45_RS14715 NONE
LOY45_RS14720 3226816 .. 3226849 + -18.3  -3.53444   GCATCGCGGGGCAAG     CCCGCTCCTACC-GAT GTC ATCTGGTGGGAGCGGG     TTTACCCCGCGATCA  95 43
LOY45_RS14735 3233814 .. 3233846 +  -9.1  -2.83822   GCAGCTGTTGAAGGC      GCCGGAGCTCATC ACCTACC GATGAACCCCGGC      TCGTTGTGACCTCAA  60 1
LOY45_RS14740 3234234 .. 3234251 + -11.3   -6.3578   TGCAGCGATAAAAAA             CCGAAGC CTGG GCTTCGG              TTTTTTTTTTGCCGT 100 47
LOY45_RS14750 NONE
LOY45_RS14755 3241616 .. 3241640 +  -7.8  -2.52464   TTACCATATCGACCC          TTCGGCGCAG CCCTT CTGCGCCCAG          TCGATTAAGCCCAGA  53 186
LOY45_RS14760 3242592 .. 3242616 +    -7  -2.73468   TATAAAAACGGTACA          GCCCGTCCTC CAGAT GGGGCTGGGC          TGCTTCAAGGTCTTC  48 180
        nhaB 3246983 .. 3247023 + -10.6  -3.29144   CGCCCTCCTTCCAGG CATCGAGAAACGGTT-GCAC TGC GCGCCAGCCGT-TCTCGATG TTGTCGGCGCGCTGG  65 161
LOY45_RS14795 3249812 .. 3249833 +  -8.7  -4.07568   GAATTTGCGCCATGA           CCTGCGGTA CAAA TGCTGCAGG            TTTTCCCGCCAGCAA  72 117
        glgA NONE
        treZ NONE
        malQ NONE
LOY45_RS14820 3258338 .. 3258350 +  -6.3  -2.76263   AGTTTCCGGTCAATC                TGTTC GTT GAACA                TACTTAAGTCCTCAG  49 6
LOY45_RS14825 3258655 .. 3258668 +  -5.9  -2.71144   ATCGCTGGCAAGCCA               GCTCC CACA GGGGC                TGCTTGCACCGAATC  48 53
        glgX 3260905 .. 3260944 +  -7.8  -2.69246   ACCGCGACGACGATG  CCTGA-ATGCCGGGGAACT GGA GGTTCCCCGGCAAGTCCGA  TGCTATAGATTTGTC  53 21
LOY45_RS14835 3261776 .. 3261819 +  -7.6  -3.40971   AGCTTTAGCAATGAT TCGGCATAGCCGCGACC-CT GGAAAG AGCGGTTGCGGCTAT-CAGA TATATATTTTTGTTT  61 33
LOY45_RS14840 3263370 .. 3263388 +  -7.4  -3.07043   TAACCCGACAAGGAA             TCGGCC GAGATCA GGCCGA             TGTTGGGGTCATAGA  55 247
LOY45_RS14870 NONE
LOY45_RS14875 NONE
LOY45_RS14880 NONE
LOY45_RS14885 3283477 .. 3283506 +  -8.5   -2.7806   GCCCATTGTGGGAGC       CG-GCGTTGCCGGC GAT GCGGGCAACGCGCA       ATTTCAGAATTTCAC  57 107
LOY45_RS14895 3284866 .. 3284886 +   -14  -5.94597   CTAATCACGGTTTTT            GACCCGGC TTTTT GCCGGGTC            TTTTTTTTGGTCTTC 100 258
LOY45_RS14900 NONE
LOY45_RS14905 3286866 .. 3286883 +  -2.5  -3.53444   TCCCACCCTAAATGA             CGGCCAC CAAC GCCGCCG              TTTAGGAACCCGTGC  46 100
LOY45_RS14910 3288221 .. 3288231 +  -2.4  -3.55783   TGCCGTTTTAAGCGG                 TGCC GTG GGCC                 TTGTGCTTGAGTTTT  48 30
        gcvA 3292920 .. 3292935 +  -3.2  -4.62772   AGTTCCCGAATTGAA              GGAATG ATTG CAATCC               TTTATTTCGTTTGCA  67 19
LOY45_RS14935 3294622 .. 3294639 +  -6.9  -2.71731   GTTGAACGCCGCCAA             CTGGCCG AGCG CCGCCAG              TACTTGCGGGATCGG  48 391
LOY45_RS14945 3295442 .. 3295473 +  -4.4  -3.62597   GGTTGTTCTGGGCTG      CTGTGC-TGTAGCCC AAC GGATTACAGGCCCAG      TTCTTGCGGAGTAAG  54 15
LOY45_RS14955 3296397 .. 3296427 + -11.2  -2.52543   TCGCCGGCAAGTCCG       GCTCCCACAGTT CTGTGGC ACCTGTGGGAGC       TGGCTTGCCAGCGAT  67 68
LOY45_RS14965 3298537 .. 3298550 +  -3.1  -2.60211   CAGATCGTCCACACC               GC-CAG CCT CTGAGC               CCTTTTTACCCGCCT  40 14
        aroQ 3299577 .. 3299598 +  -3.7  -2.87931   GACGGGTGCGAAAAT           C-CACCGG GTCGTTG CCGGTGCG           TATGTCCAGGCTGAC  43 524
        fusA NONE
        ligD 3306298 .. 3306312 +  -3.5  -3.09516   TCAGCAAGGACCTGC              GCCGCC GCCT GG-GGC               TTGAATAATGGACGA  46 3
LOY45_RS14995 3306570 .. 3306580 +  -2.4  -2.93723   ACGGCACCCCCCCTT                 CGCC CCG GGAG                 TCTACTTCATGAACG  41 3
LOY45_RS15000 3307533 .. 3307547 +  -5.8  -5.16572   TCAGGTTAAAAACCA               TCATAA CCA TTATGA               TTTTTTCGCTTGCCT  86 146
LOY45_RS15010 NONE
LOY45_RS15015 NONE
LOY45_RS15020 3311881 .. 3311932 +  -2.1  -4.11216   CAGGCCATCGGCCAG GGCAACCATGGCATCGGCTTCGAGC TTCA GGTCGAGGCCG--GCCCGGATCGCC TTTTGCGCCTGCAGG  58 150
LOY45_RS15030 NONE
LOY45_RS15040 NONE
LOY45_RS15045 3316772 .. 3316813 +  -4.9  -5.06414   TTTCTGTTCGCCTTC GCCTTCCAGCGGCTCGACCG TGG CGATCTTGCC-CTGGCTGGC TTTTTCTTCGACCAG  85 170
LOY45_RS15055 NONE
LOY45_RS15060 3318224 .. 3318254 +  -7.4  -3.53224   AGCCCTGCGGCTTGG       CCGCGCAGCCACAG CCA CTGCCGTTGCACGG       TTTGCCGGACGGATG  61 134
LOY45_RS15065 3319037 .. 3319081 +  -9.1  -3.61715   CTGCGTGGTTCAGGC CATCGCCTGGGGTTTGAACGG AAT CTGGCTACGCCCCAGGCGCTG TTCTTCGCGCACCTG  68 52
LOY45_RS15080 NONE
LOY45_RS15085 NONE
LOY45_RS15110 3325130 .. 3325173 +  -2.3   -4.7373   CTGACTGTGGGGGGC TGGCG-TGCCGGCGATCG AGCGCGCAG CGGTCGCAGTCAACGCCC TTTTTGCTACCATCG  69 37
LOY45_RS15115 3326334 .. 3326352 + -12.4  -2.71712   GCCGAGGCCGAGCCC             GCCTGGGC CTT GTCCAGGC             CTTTGACCGCCAGCA  65 360
LOY45_RS15155 3333801 .. 3333820 +  -6.4  -3.09987   CGCGACTTTATTGCC            GGGGCTTT GCAT GAAGCCTC             TTGAGTCGCTATTGC  52 2
LOY45_RS15160 3334424 .. 3334434 +  -8.2  -3.17714   TCAGGCCTGGGCCGC                 GCGC AGT GCGC                 TTAGTGCCGGTTTGA  60 42
LOY45_RS15170 3336147 .. 3336166 +  -9.2  -3.67989   CGACCCGCAACAGAT            CCAGACCC TGCT GGGCCTGG             TTTGAATGCCCTTTT  68 1
LOY45_RS15175 NONE
LOY45_RS15180 3338210 .. 3338247 + -19.3  -4.42386   GCGCAAGTAAGCGCT   G-ATCGCGGGTCAAGTCG ACT CGACTTGCCCCGCGATGC   TTTTCTACCTCCCAC 100 31
LOY45_RS15185 NONE
LOY45_RS15190 NONE
LOY45_RS15195 NONE
LOY45_RS15200 NONE
LOY45_RS15205 NONE
LOY45_RS15210 NONE
LOY45_RS15215 3343579 .. 3343591 +  -5.5  -2.87564   GCCTTACCCCTGCGC                TGTCC GTC GGGCA                TGTCTGGCGCCGTAC  47 40
LOY45_RS15220 3344585 .. 3344603 +  -4.5  -2.87051   GGCCCATAGTTGCCA             GGGCACA ACCAC TGTGCCG             ATTTCGTCATGGGCG  44 282
LOY45_RS15225 NONE
LOY45_RS15230 NONE
LOY45_RS15235 NONE
LOY45_RS15240 3348229 .. 3348241 +  -4.7  -2.94099   CGACGCTTGAGATAA                ACGCC GGG GGCGC                TCTATGATCCCGACG  46 31
LOY45_RS15245 3349041 .. 3349069 +  -8.9  -2.87931   CTGAGTGTTCCTTTA       TCGG-GCGCTGC GCGCAG GCAGTGCTCCGA        TATGTAACACCTGCG  60 37
LOY45_RS15250 NONE
LOY45_RS15255 3351864 .. 3351874 +  -2.4  -2.64144   GGCTGCCTGCAAGGA                 GGGC CCC GCAC                 ATGTTTGACTACACC  38 7
LOY45_RS15260 3352535 .. 3352551 +  -2.9  -3.64488   TGGCGGCTGTTCCGT              TACTGAG GAG CTCGGCA              TGTTTTCCACCGGTT  50 20
LOY45_RS15265 NONE
LOY45_RS15270 3353937 .. 3353962 + -14.1  -2.52543   TCGCGGGGCAAGCCC         GCTCCTACAGG GATC TCTGTAGGAGC          TGGCTTGCCAGCGAT  78 46
LOY45_RS15275 NONE
LOY45_RS15280 3356089 .. 3356122 + -13.1   -3.6422   GGCCTCTGAGTGATT     GCCGGGCCGG-CTCCG TCC TGGAGACCGGCCTGCC     TGTTTTGCGCCCATA  81 32
        abaF 3357511 .. 3357521 +  -2.4  -3.06796   CAAGCCGCGCCTGTT                 CGCC AAG GCCG                 TTCGCTGGCCTGACC  42 2
LOY45_RS15290 3359372 .. 3359394 +    -4  -3.74693   TCCAGGGCGATCAGC           AATTCGCCGT GGT ACGGCGAGGC           TTTGCTGCCGTCGGC  56 256
LOY45_RS15300 3364973 .. 3365031 + -19.7  -4.07885   GTTCTTGAGCCAGTA AC-C-CATCGCAGGGCAAGTCCGCTCCCA TGG TTGGAGCGGGCTTGCCCCGCGATGAGTGA TTTTCACACCCCCTC 100 33
       ribBA 3366619 .. 3366651 +  -4.8  -3.39327   AGCTCCTTGTCGCTC     GGA-CGCTGCGCC ACGAACAC GGCGCGGCCATCC      TTGTAGATCTCCAGA  51 132
LOY45_RS15320 NONE
LOY45_RS15325 NONE
LOY45_RS15330 NONE
LOY45_RS15335 3371209 .. 3371226 +  -3.4  -3.79113   ATCTGGCGGTGCCCT             CGATGG CTACCA CTATCG              TTGTTGTAAGGCGCT  54 323
LOY45_RS15380 NONE
LOY45_RS15385 NONE
LOY45_RS15390 3380961 .. 3380975 +  -2.8   -4.7497   ATAACGAATACCCCT               CAGC CTGTGGA GCTG               TTTTTCATGAGTAAG  70 86
        modA NONE
        modB NONE
        modC 3383492 .. 3383502 +  -3.2  -3.19246   GGGCACAGATCAAGT                 CGGT GGC ACTG                 TTGGGTTGACGTTGC  43 6
LOY45_RS15410 3384642 .. 3384662 +  -5.4  -3.01924   AACCCCCCTATGCTT            GCGGGTAT GAGCA GTACTCGC            TGTTCGGGAGCGCTC  48 100
        csrA 3385433 .. 3385451 + -10.2  -3.04263   TCGAAACCTTCGTCC             TCCAGGGC CCA GCCCAGGA             TATTGGCGATCAGGT  62 411
LOY45_RS15435 3388603 .. 3388614 +  -7.2  -2.71712   CGACATACTGAATGA                CGGC CATT GCCG                 ATTTCGGCACGGAGG  53 73
LOY45_RS15440 3388822 .. 3388838 + -10.8  -4.84527   ACCATCTTCTGAGAA              GGCGCC TTAGC GGCGCC              TTTTTGCTGTCTGGC  95 37
LOY45_RS15445 3389369 .. 3389424 + -21.8  -2.89921   GTGGATGGGCGTTAA CCCGCAACCGCCTCCAGGCGCCAGCG CCGC TGCTGGCGCCTAGAGGTCGTCGAGGG TGTCTACGCCTTCAT 100 26
LOY45_RS15460 NONE
LOY45_RS15465 3391306 .. 3391316 +  -5.4  -3.15861   CAGATAATCGCCCGG                 GTCA GGG TGAC                 TTCATCGAGATGGTC  47 110
LOY45_RS15510 3396838 .. 3396859 + -14.5  -3.20435   CGCCTGGATGCTCAA           CTTGCCGCA CGGA TGCGGCAAG            TTGATAGGTGCTTGC  81 130
LOY45_RS15530 3401576 .. 3401590 +  -5.6  -2.70932   TGTGATCGGCACAGC               CTGCAG TTG CCGCAG               TGCTTCGCGCAACAG  46 475
LOY45_RS15545 3402780 .. 3402791 +  -5.8  -4.12859   GCGCGACTTAAAGCC                GGGA TCTA TCCC                 TATTTTGTTATTTCT  66 47
LOY45_RS15560 3405010 .. 3405041 +  -3.6  -3.76492   CCGCTGATGCTGCAA      TTGC-CGCAGGAACG ACA TGTGCCGGCGAGCAG      TTTCCTCGACTTCGA  55 486
LOY45_RS15570 3406461 .. 3406474 +  -4.5  -2.60244   ACCAGGCTCCACTAC               GCTTC GGTA GAGGC                TCGATTAATTACAGC  43 138
LOY45_RS15575 NONE
LOY45_RS15585 3408810 .. 3408834 +  -3.6  -3.27704   GCCAAGCCCTCGAAA         GGC-TGAAGTT TCGG AACTCCATGCC          TTAAGTTTCGGAACT  48 514
        alkB 3409928 .. 3409954 +  -2.9  -3.26779   CGGCCGGCGGATCAA         CCTGACCTTGC GTAAG GCAGGCTGAGG         TCTATGTTTTACAAA  46 1
LOY45_RS15605 NONE
LOY45_RS15610 NONE
LOY45_RS15615 3413251 .. 3413265 +  -7.1  -2.73364   ACATCGTTGCCACGG               CCACC CTGCA GGTGG               TCATTGCCATCGAGG  48 307
LOY45_RS15625 3417259 .. 3417285 +  -2.9  -2.62184   CCAACGCGGTGATCT        GCAGC-CCATGC TTGA GCAAGGCGCTGA         TGATCTCGCCCAGGC  39 283
LOY45_RS15635 NONE
LOY45_RS15640 3418865 .. 3418905 +  -8.2  -3.25015   CTGACCATGACGTTG CGCGGCT-C-ACCCGGCAGG TTC CACGCCGCGTTGTAGCCGCG TTCGTAGTACTTGCG  59 72
LOY45_RS15670 3427690 .. 3427702 +  -4.7  -3.05384   CACACACAACGCCAA                GCGGG TGT CCGGC                TTCAGTGCCAGCAAC  47 178
LOY45_RS15685 3430723 .. 3430733 +  -3.2  -3.48276   TTGTCCCGCGATCTA                 GTGC CTA GTAC                 TTGTCTCGCCCCAAA  48 18
LOY45_RS15690 3432092 .. 3432105 +  -5.9   -3.1552   TAATGCCGCCCAGGC               TGCGC TTGA GCGCG                TGTTGCTCGGTGGCC  49 457
LOY45_RS15710 NONE
LOY45_RS15715 3436682 .. 3436693 +  -2.2  -3.54424   GTCCCCTTCGACACT                C-CGG TCA CCGTG                TTTACGACGCTGCGC  47 112
LOY45_RS15730 3439842 .. 3439856 +  -3.4  -4.22652   TTGTCGGTGCAGTCG               CGGTCC TCG GGGCGG               TTTTCGATACTGTCG  64 108
LOY45_RS15740 3441113 .. 3441139 +   -18  -2.71364   ACGCAGCTGATACTG         CGGTGCCAGGGC CCT GCCCTGGCACCC         TGCTTCACCCCCTGA  86 31
LOY45_RS15745 3442626 .. 3442658 +  -5.5  -3.14881   CTGCTCGACGATGTC     CGGCCGGCCATAGC CGTAGC GCT-TGGCCTGCAG      TTCGTCGCGCAGTTG  49 196
LOY45_RS15755 NONE
LOY45_RS15760 NONE
LOY45_RS15765 3448436 .. 3448449 +  -3.8  -3.60948   AAGCGCGTATTGACC               CGCA GGCATG TGCG                TTTGAACGTCTCTTG  52 28
LOY45_RS15770 NONE
LOY45_RS15775 3452471 .. 3452484 +  -3.1  -4.20918   CGTTAGTGCTTATAA               GGATC GTCT GATTC                TTTCTTCCGATTGGC  61 70
LOY45_RS15780 3453169 .. 3453187 + -13.1  -5.45652   AGGCTCTGACCCGGA             GCGGGGC AACTC GCCCCGC             TTTTTTCTTGGCAAT 100 50
LOY45_RS15785 NONE
LOY45_RS15790 3456618 .. 3456661 +  -3.1  -3.14344   GCGCGTGCCGCTGGT GTGTCAACCGGCGTTGCCTTG ATCA CGGGGCAA-GCCTGCTG-CGC TTACTGACGCAAATG  43 4
LOY45_RS15795 NONE
LOY45_RS15800 3457688 .. 3457698 +  -3.2  -3.06569   CCCCCGGTCAATGCT                 TGCT GAA AGCG                 CTTTTCGCGCATTGA  43 57
LOY45_RS15805 3458567 .. 3458590 +  -4.4  -2.78712   GGGCGTGTGCAGGTC          GAGGCGCGCT GATG AGCCCGCTGC           TGATTGCCTTGCAGG  44 14
LOY45_RS15810 NONE
LOY45_RS15815 3462089 .. 3462117 +  -5.8  -3.48395   ACCGGCTACTGACTT        TGCAGGAGCGGG CTTGC CCCGCAACAGCA        TTGTGTCAGCCACAT  56 29
LOY45_RS15820 3463076 .. 3463103 +  -3.3  -4.31379   GTCTTTGCCGCTGGC        ATGGGCCGCCGC AATCC GCGCC-GCCCAG        TTTTCATCGGTTCGT  64 367
LOY45_RS15830 3464431 .. 3464450 +  -5.6  -4.13767   CCCACACCCGCCGCA            CCTTCTGC GAGC GCAGGCGG             TTTTCCGGTGACAGC  66 98
LOY45_RS15840 3466580 .. 3466594 +  -2.8  -3.53563   GCAGACCCGCCCTCG               TCATGC GTG GCATTA               TTTGCGCAAACCTCT  48 48
LOY45_RS15845 3469102 .. 3469126 +  -8.5  -2.52543   AGGGCACAGCGGTTA          GCTGCAACAGG ATC CCTGTGGGAGC          TGGCTTGCCAGCGAT  55 40
LOY45_RS15855 3470351 .. 3470389 +  -7.3  -4.09739   CGAAGCTGCGGCTGA  G-CGCCAGGGCGCGGGTG CGCG CATCCAGGGCCTGGCGGC   TTTTCCAGACGTTGA  71 243
LOY45_RS15875 3475470 .. 3475492 + -14.9  -3.58726   TGAGTTTGAAGTAAG           CGAAGGGCC ATTGC GGCCCTTCG           TTCTATATACAAGGA  90 55
LOY45_RS15885 3476849 .. 3476881 +  -3.2  -3.06796   ATCTGGCGTACCGAG      GGATAGCGCCAGGC ATACA GCTTGGCGCAGGCA      TTCGGTACACTCCGC  43 20
LOY45_RS15890 3478546 .. 3478561 +  -4.6  -3.20723   TCACCGGCAAACAGG              TCGCGG CACA CCGTGG               TTGCCTTGCTGACCG  49 493
LOY45_RS15900 3479256 .. 3479271 +  -6.1  -3.92592   TGCCCGGTTGCGGCA              GGCCA AGAATG TGGCC               TTTCATCTTGCCGAT  62 159
LOY45_RS15925 NONE
LOY45_RS15930 3486994 .. 3487008 +  -3.4  -3.75015   CCTTGAGCTTTTTCT               CCATGG CTA CCGGGG               TTTCATAGCCGTTGT  54 394
LOY45_RS15950 3493049 .. 3493061 +  -4.8  -3.50853   CAGCCACATGCGAAA                GGTC AGCTC GACC                TTCTGCTTGAGCAGC  53 229
LOY45_RS15970 3496179 .. 3496198 +    -5  -3.08642   CGCTTCGTAGGCAAA            CTCGCT TTCTTTTC AGCGAG             TTAGGTAGGTGCTAT  50 83
LOY45_RS15975 3496795 .. 3496805 +  -4.6  -4.18488   GCCCACGGCGTCGAC                 CTGG ATG CCGG                 TTTCTTCGCGTAGCT  64 279
LOY45_RS15985 NONE
LOY45_RS15990 3497995 .. 3498006 +  -5.8  -3.48924   ACAAGTACGCCCGCA                GCCT ACCC AGGC                 TTATCTGCGAAATAA  56 129
LOY45_RS15995 3498507 .. 3498529 +  -4.1  -4.16842   GTCCCGGCGGGCATT          GCG-GCGC ATCAGCTC GCGCTCGC           TTTGTTCCAGGTACA  62 169
LOY45_RS16025 3504134 .. 3504152 + -10.3  -2.96779   TGCAGGAGCGCTGGC             CGTCAGC CTGGA GCTGACG             ATTGTATTTTGCCGG  67 9
LOY45_RS16030 3506029 .. 3506042 +  -8.1  -2.80935   CTGGGCCAGCTTGGC               GCGGA AGTA TCCGC                TGTCCTGCATGCGCT  52 515
LOY45_RS16040 3506916 .. 3506967 +    -8   -3.1085   ACTGTACACACCGAC CCTGTGGGAGCTGGCT-TGCCAGC GATGAG GCCGGTACAGCCAGCACAC-CAGG TGTTGCCTGAATTAC  60 99
LOY45_RS16050 NONE
LOY45_RS16055 3508561 .. 3508573 +  -5.5  -3.10464   AGGTCGTAGCCTTCA                TCGGC AAA GTCGA                TGTTGCGGTTGCTGG  49 517
LOY45_RS16065 3509866 .. 3509884 +  -2.4  -3.05844   ATTACAGCGAGGAAA             TGAACATG CCG TATGTCCA             TATTCGCGTGACCGA  42 40
LOY45_RS16070 3510380 .. 3510408 +  -8.7  -2.86271   GGCAGATGAACCGGC        CATGCCGGCCATG GCG CATGGCCCGCCAG        TAGTTCTCCTGGGCA  55 325
LOY45_RS16090 3514707 .. 3514719 +  -4.8  -3.51329   GCTGGTGACCCGTGA                CAGC TGGGT GCTG                TTGTCGTTGAGGATC  53 304
        argC 3516448 .. 3516472 +  -5.5  -3.89346   AGCCGGCCTTGCCAG          CGATGGGGCGC GAA GCGGCCCCTCA          TTTGTCCCGTAACAC  62 117
LOY45_RS16110 3519573 .. 3519601 +    -8  -4.62783   AGCATCCTACGCTTT        TTTCCCGGCAGC ACCCC GCTGCCGGGCCG        TTTTTCAGGTAGGTC  82 39
LOY45_RS16115 3521296 .. 3521308 +  -6.9  -3.96148   GATCCCCCGGGGTAC                GGCCG TCG CGGTC                TTTGTGGTCAAAGAA  67 262
LOY45_RS16125 3522824 .. 3522845 +  -5.7  -3.44051   TACGCCCGACTGGCA           GAACGACGG ATAG CCGCCGATC            TTGTGCTCGTAGGCG  55 183
LOY45_RS16140 3525095 .. 3525108 +  -8.1  -3.73072   GTGGCAACCACCAGT               CTGGC CTTG GCCAG                TTTGGTAAAGACCTT  65 381
LOY45_RS16150 3526794 .. 3526820 + -13.1  -2.83905   ATCCAGCGGCGTAAA        CCCCAGTACCAC CCGG GTGGT-CTGGGG         TGTCCTCAGTTCTGC  69 163
LOY45_RS16160 NONE
LOY45_RS16165 NONE
LOY45_RS16170 3532110 .. 3532149 + -21.6  -3.02144   CTCATCGCTGGCAAG  CCAGCTCCCACAGGTATCG CAC CGAT-CCTGTGGGAGCGGG  TCTTGCCCGCGATCG 100 394
LOY45_RS16180 NONE
LOY45_RS16185 3534464 .. 3534475 +  -2.2  -3.10715   TGCAAAGCCGCCGAA                CTCT GAGG GGAG                 TTGCCTGATGCTCGA  42 20
LOY45_RS16190 NONE
LOY45_RS16195 NONE
LOY45_RS16200 3537096 .. 3537118 + -11.9  -2.53876   TAAGCCTCCAGGCCA           CGCCCCGGC TGCAC GCCGGGGAG           TGGCTTGGGATACAC  70 38
LOY45_RS16205 NONE
        ribD 3538652 .. 3538662 +  -2.4  -2.78463   TTAAGGCAAACGGTT                 GCGC CTA GCAC                 TATGGTCGGGCACAT  39 65
        lpxO 3539696 .. 3539733 +  -6.9  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTTCAGT GCAT GCTTTCTCTGTGGGAGC    TGGCTTGCCAGCGAT  50 52
LOY45_RS16220 3540217 .. 3540250 +  -3.7  -2.52681   CTGTAACCTCTCCCT     CACGTGAGCGCGCGGT CGC GCCGCGC-CTCACCCA     CTTCCTGGCGTTTTC  41 35
LOY45_RS16225 3541005 .. 3541020 +  -3.2  -4.28254   GCTCAGATACGCAAG              CCGTTG ACTG CAAAGG               TTTTCGGTGTTCAGA  61 170
LOY45_RS16230 3543519 .. 3543533 + -12.8  -3.68738   GCGTTGCAGCCCATC               GCCGGC AAC GCCGGC               TTGTGTCTTGAGGTA  81 55
LOY45_RS16235 3544934 .. 3544958 +  -2.2  -3.14344   TCGCCCATCCAGGCA         CCACTGGTG CGCCACTT CACCA-TGG          TTGCTCGACAGGCTG  42 289
LOY45_RS16245 3546830 .. 3546866 +   -16  -3.18728   GAAGGTTGATGACCA   GGGGCCGATT-GTCAGA ATTG TCTGACAAAACGGCCCC    TTGGCTCTTGCGGGT  85 32
LOY45_RS16250 3548625 .. 3548640 +  -2.4  -3.54424   GTGCACTGATCACAC              ACCCGT GGGA GCGGGC               TTTCCCGCGATAGCG  48 32
LOY45_RS16255 3549940 .. 3549957 +  -4.7  -3.06183   GGCTTCACCGCCTGC             GGCGCGC TTCG GAGTGCC              TTGCGTGAAACTCAA  47 55
LOY45_RS16260 3551423 .. 3551447 + -15.7  -3.05963   TGAGCACAGGTTCCG          CCACGCGGCAG GGC CTGCCGCGTGC          TGTTGCAGTCGAGGT  85 38
LOY45_RS16265 3552422 .. 3552453 +    -3  -2.73124   GCCCGCTCGGCGCGG      TTGGTGCTGGAT TTGTAGGC ATCAAGCTCCAA       GTTTCAAGCCTCAAG  41 8
LOY45_RS16270 NONE
LOY45_RS16275 3554407 .. 3554429 +    -9  -2.74589   AGGCAGGTGGCCAGG           GCCGCCATGC GCC GCAGGGCGAC           GTTGTCGTTGTGCTT  60 51
LOY45_RS16300 3558043 .. 3558057 +  -3.4  -3.61398   TCGTCGGCCTCTGCA               GCGTCC ATC GCGCGC               TTGTTGCCAAAGCCG  51 52
LOY45_RS16310 3560783 .. 3560793 +  -4.6   -3.5882   GCCGTATCGTAATAG                 GTGG TCA CCGC                 TTTGAGGGTGGTCTC  55 427
LOY45_RS16325 NONE
LOY45_RS16330 NONE
LOY45_RS16335 3564402 .. 3564459 +    -5  -2.89913   ATCAGCACCCGCATG CAAGCTACGAGTGCCACCTTGGCGCACTT GCC ACGTGC-CCGAAGTG-C-TTCGTAGCGTG CTTTAAATTCTGTGT  45 428
LOY45_RS16360 NONE
LOY45_RS16365 3570064 .. 3570078 +  -9.2  -3.63515   CACCACTGACTCGAT               GGCCCG CTC CGGGTC               TTCTTCCAGCTCCAG  68 413
LOY45_RS16380 NONE
LOY45_RS16385 NONE
LOY45_RS16390 3575625 .. 3575652 +   -17  -5.38054   ACGGTTGCATGAAAA        ATCCCGCAGGCC ACAC GGCCTGCGGGAC         TTTTTGTTTATGGCG 100 46
LOY45_RS16415 3581194 .. 3581208 + -11.4  -3.02511   GCGCGTCGATAAATA               CCCGCA CCT TGCGGG               TATTGCGCCGGTGCG  65 41
LOY45_RS16425 NONE
LOY45_RS16430 3584964 .. 3584974 +  -2.4  -3.48593   TCCATCCACCCCCGC                 TGGC GCC GCCC                 TTGTGTGCACGCGTG  46 45
LOY45_RS16435 3586629 .. 3586645 +  -2.1  -4.61231   CCAGCGGCACCGGGT              CCTGGTC GAA GGCGGGG              TTTTTCGCGCTGTCG  70 299
LOY45_RS16445 3588171 .. 3588181 +  -2.4  -4.17556   GGCGCCGACCACACC                 CGCC CCT GGGG                 TTTGTTCACACTGTC  58 251
LOY45_RS16475 3595395 .. 3595436 + -14.6  -3.85698   CGCGACTGTCCACTT TGGGTCGATAGCGGTC ACTCGCGAAC GGCTGCTATCGACCCA  TTTCTGCCGGCGGCG  91 358
LOY45_RS16480 3597786 .. 3597824 +  -2.2  -3.86346   CAAAGCGCCCCACAA   TCACCCTCGCAGGCGC TTTTTTT GTGCCCGCGATGATGC   TTTATGGCGGGCTGC  51 323
LOY45_RS16485 3598569 .. 3598592 +  -5.2  -2.83004   GCCATACACCGGCAG          CAACCGGC CAGAAGCA GCCGGTGG           TCGTTGCGTTTCGTT  47 292
LOY45_RS16490 3599051 .. 3599069 +  -5.2  -3.21747   GACACTCTCGCTGTC             GCAGGCTT GGT ATGTCTGC             TTCGTAGTGGCGTGA  52 64
LOY45_RS16505 NONE
LOY45_RS16510 3604061 .. 3604088 +  -7.7  -2.97059   GCCAGGTCAATTGGG        GCCCTGCATCGG AAGTA CCGA-GCAGCGC        TGTGGTCTGTTTTAC  56 191
LOY45_RS16515 3604891 .. 3604903 +  -3.4  -2.71791   TCCCTGTGCGCAGCA                TTGC ATTAG GCAA                CTTTACGGGGGGCGT  40 61
LOY45_RS16520 3605354 .. 3605369 +  -6.8  -3.28791   CCTAATGTCCGCTTG              TGGCCG GTAG CGGTCA               TTGTCAGCCGCCGCT  56 45
LOY45_RS16540 3611591 .. 3611610 +  -3.6  -3.56821   AACACCAGGCTTTTC            GGCTAT CCAGTTAT ATAGCC             TTTGCGCGGTGTGGT  51 76
LOY45_RS16550 3614631 .. 3614648 +  -6.3  -2.73483   CTCTGGATAGGTACC             GCCAATCC AGC GGAT-GGC             TGCTTCCAGTCGAGT  46 398
LOY45_RS16560 3616241 .. 3616252 +  -5.8  -2.62463   TACCTTGATCACTGC                GCAC CTGA GTGC                 CTTGTGGATAGTGAA  48 50
LOY45_RS16575 NONE
LOY45_RS16580 3618584 .. 3618594 +  -2.4  -3.60296   CACGCGGGTAAAGTT                 GTGC CGG GCTC                 TTTAGCATCGAGCTA  48 30
LOY45_RS16585 3619326 .. 3619342 + -10.1  -3.14931   ATGATGGCAAAACAA              CCGACCG CTC TGGTCGG              TTAATGAACACTAGA  66 37
LOY45_RS16590 3619726 .. 3619747 +  -5.7  -3.17901   CTGCGGTCTAGAGCC           GCCGGGCTG ATTG CATCCGGGC            TTCGCTTGGCCCTGT  52 30
LOY45_RS16595 NONE
LOY45_RS16600 NONE
LOY45_RS16605 3623032 .. 3623044 +  -2.6  -3.06686   GCATGAGGTGAGTGC                GCGG GAGTA TCGC                TGGTTTCTCTAGGCT  42 1
        fdnG NONE
        fdxH NONE
LOY45_RS16675 NONE
        fdhE 3642939 .. 3642966 +  -7.8  -3.28712   GCCGGCAAGGCCGGC        TCCCACAGGTGCA GTG TGCACCT-TGGCA        TTGTGGGAGCCGGCC  59 51
LOY45_RS16685 3643298 .. 3643308 +  -2.4  -3.09671   GACCGGCGAGCAAAA                 CCAC ACA GGGG                 TCTTACACTTCAACT  42 53
LOY45_RS16690 3644869 .. 3644904 +    -6  -2.64422   CAGTGCACGCGGGTT    GCGCGGATACTAGCGT TGTT GTGCGAGAATGCGCGC     TGGTCTCGCGTCTCT  48 13
LOY45_RS16695 NONE
LOY45_RS16700 3645574 .. 3645607 +  -8.3  -2.52543   TCGCGGGGCAAGCCC    GCTCCCACA-GG-CT TTGCGC AGTCCGTGTGGGAGC     TGGCTTGCCGGCGAT  55 41
LOY45_RS16710 3647616 .. 3647644 +  -3.8  -4.86001   TGCGCGTGCGCGAGC       GCCTG-GCCGG CTGAGGCC CCGGCGCAGGA        TTTTTCTGCGCTGCT  76 12
LOY45_RS16715 3647981 .. 3647995 +  -3.4   -3.6849   AAGACCCTGGGTCGC               CGGTAC CAG GCGCCG               TTCTTCGCCTTCGAT  50 90
        glcD NONE
        glcE NONE
        glcF 3651851 .. 3651861 +  -2.4  -3.01712   TGGCATAAGCTCAAT                 CGGG CAA CCCC                 TGTTCGACAACCCGA  41 33
LOY45_RS16735 NONE
LOY45_RS16740 3653166 .. 3653212 +  -2.9  -4.44797   GAAACCGTCGGTACG TTGCTCACCC-GCCAGCACCAGC TGC GCCGG-GTTGGCCGGGTCGGTGG TTTTCATGTTGGTGC  66 513
LOY45_RS16760 3657231 .. 3657250 + -13.6  -3.72576   TGCTTGCTGCGACGC            GGCGCATC CTAT GATGCGCC             TTTCGTAACGACACA  88 522
LOY45_RS16770 3659245 .. 3659256 +  -7.2   -2.9294   AGGAGCGGGCTTGCC                CCGC GATA GCGG                 TCTGTCAGTCATATC  56 47
LOY45_RS16775 3660459 .. 3660472 +  -3.8  -3.16742   CTCTGAACATTTGCC               CGGT AATGGA ACCG                TTCATGAGCCTTCGC  46 82
LOY45_RS16780 3661111 .. 3661122 +  -3.6  -3.61398   GCCTGCATGGATTTT                GTCG TCCA CGGC                 TTGTTGCCGGGCCAG  52 46
LOY45_RS16785 3663469 .. 3663486 +  -3.4  -3.79113   ATCTGGCGGTGCCCT             CGATGG CTACCA CTATCG              TTGTTGTAAGGCGCT  54 326
LOY45_RS16810 NONE
LOY45_RS16815 3671182 .. 3671211 +  -7.1  -3.06696   GCTGACGCAGCAACC       TGGGGATC-GCCAG CAC CGGGCCGATGCCCA       TCTCTTCCGGCGCCA  51 317
LOY45_RS16845 3677989 .. 3677999 +  -2.4  -3.19246   ACAGCCACATTTTCA                 GGCG GAT CGGC                 TTGCCTTCGGCTTCC  44 298
LOY45_RS16855 3681142 .. 3681161 +  -7.2  -2.94144   AATTGCCTTAAGGCC            GTCTGTTT TTAT AAACAGGC             TAATTTCGCTGAAAC  56 81
LOY45_RS16860 3683841 .. 3683861 +  -5.3  -3.61398   CACCCGGCAATCCCA            CCCTTGCGC CCG GAGCAAGGC            TTGTTGGCCGCCAAC  55 433
LOY45_RS16870 3685065 .. 3685087 +  -7.7  -2.71011   CGAAGCAGTTGCTCA           GCAAACGGC AGTGA GCGGTTTGC           TGATTCAGGCCAACT  53 49
LOY45_RS16875 NONE
LOY45_RS16880 NONE
LOY45_RS16885 3686678 .. 3686706 + -11.8  -3.16191   CGGTGTCGGGGTCAT       G-CAGCACAGGTC AGAT GGCCTGTGCTGAC        TTGATCGGCGTATCC  74 87
LOY45_RS16890 3688711 .. 3688723 + -10.5  -3.24747   ACCCGGCAAGCGCTT                GGCGC GGG GCGCC                TTGCTGATCTCGACG  65 509
LOY45_RS16925 3694308 .. 3694335 +    -4  -3.01712   ACGGTGACCGGCCCC        ACATGGCCGGTG ACCC CGCTGCCCATGC         TATTGGCAGCCAGGA  44 55
LOY45_RS16930 3698009 .. 3698044 + -11.3  -2.86164   TGCTGAAATCGCTAG   C-CCGCGTTGCTGAGCG GTTT CG-TCAGCAACGTGGCG    TCTGCTCATTGGCAA  69 403
LOY45_RS16945 3699805 .. 3699820 +  -3.2  -3.16088   ATTTGGTAACAGCAA              GTAGGA CCAA TCCTTC               ATTTTCGTAGGATCT  43 157
LOY45_RS16950 3701049 .. 3701061 +  -3.3  -3.39286   GTCGAAGCGTGTCAC                GATCC GGT GGTTC                TCTTTCAGCTAGTGT  48 291
LOY45_RS17040 3715232 .. 3715246 +  -5.6  -2.74741   TCTGCGAAGGTAAAA               GGGGCT ACA AGCCCA               TAATTAGACTATGAT  47 86
LOY45_RS17045 3715565 .. 3715581 +  -7.2  -5.65177   GACCGAATAAAAAAA              CCCGTC CTTGT GGCGGG              TTTTTTTGTGCCTGT  95 46
LOY45_RS17060 3717124 .. 3717138 +  -2.1  -3.53224   GCTCGCCGCATTGTT               CAGGT CAGCA ATCTG               TTTCAGCCGCGCCTC  47 270
LOY45_RS17100 3725209 .. 3725238 + -13.5  -2.73483   CGAGTAACCCCCAAG       TGCTTGCCCGCCC TGTA GGACGGGCAAGCC        TGCTTCCCCTACCCT  76 42
LOY45_RS17105 NONE
LOY45_RS17110 3726488 .. 3726507 +  -8.6  -2.62396   CGCCAACCCGCACAA            CGAAGGCT TCGT AGCTTTCG             TCATCTCGCCGGCTC  53 187
LOY45_RS17140 3729965 .. 3730016 + -15.1  -2.82895   GGGCTTCTAATCGCC CTGCCCGGCCTGCGCCGTCACTGCC CCAG GGCGCTGACGGC-CTG-CCGGGCCG CTTGTTCCTGGCCCG  81 31
LOY45_RS17150 3731210 .. 3731233 +  -7.4  -3.02511   CAGTAGCCTCGCGCT          TCAAG-CGCGC CCG GCGCGACATGA          TGTTGAGCACCTCGA  56 176
        nhaR 3733420 .. 3733441 + -10.1  -3.14132   CAGCGAAGCGGCAAA           GGCCGGTGCC TGG GGCGC-GGCC           TTGATCAGCCGCACA  63 201
        sstT 3735819 .. 3735855 + -15.1   -4.1964   AGGCCGCCTGAGCCT    GACCGGCAGCCGGTGCG TCC TGCACCGGCTGCTTGTG    TTTTACCCTGTTGCG 100 30
LOY45_RS17180 3737045 .. 3737055 +  -4.6  -3.23853   AGCTATCGGCCAACT                 GGCG GCC TGCC                 TGTTCATTGCGGGCG  49 515
LOY45_RS17190 3737890 .. 3737909 + -16.4  -4.83615   TCCGCACAGCCCCTT            GCCCCGCC CTTT GGCGGGGC             TTTTTATGGGCGGTC 100 69
LOY45_RS17195 3739363 .. 3739374 +  -3.6  -3.65902   TGGCTTCGCGGTGCT                GCTC GGTG GGGC                 TTTGAGTGAACTCGA  51 425
        pbpG 3741171 .. 3741196 + -19.1  -3.55444   GCTGACTGAAAACGA         CAGGGCCTGTG CATG CACAGGCCCTG          TTTCAAACGTCAGGC 100 32
        pvdM NONE
LOY45_RS17225 NONE
LOY45_RS17230 3745372 .. 3745382 +  -4.6  -2.59431   CGCGAACTCTAAGCC                 GCCG CGC TGGC                 TAAATTGTGCCCCGC  43 29
LOY45_RS17235 NONE
LOY45_RS17240 3748493 .. 3748542 +  -4.9  -2.70979   CGAGCCCGTCTGACC GGAGCGGGGCAAACTCCCGGAAA AATA TTTGTACGGTTTTGCCCCGCTCG TGCGTTTCATTGAAA  43 28
LOY45_RS17245 3751080 .. 3751097 + -12.7  -5.87688   TCCTGACAGACAAAA             GCCCCCT GTAC AGGGGGC              TTTTTTTTGGGTTCT 100 43
LOY45_RS17280 NONE
LOY45_RS17285 NONE
LOY45_RS17290 NONE
LOY45_RS17295 NONE
LOY45_RS17300 NONE
LOY45_RS17305 NONE
LOY45_RS17310 NONE
LOY45_RS17315 3796849 .. 3796900 + -19.6  -2.52464   CTGCTTTACAGCCCA TCGTCGGCAAAGCCAACTCCCACAG GTA TTGTGGGAGCTGGCTT-GCCAGCGA TAGCTTCACCACCGA  95 58
LOY45_RS17360 3805399 .. 3805418 +  -3.5  -2.51888   ATGCAGTGGTTTGCC            GAGCAGC GCGGTG GCTGATC             CTGTTACATTTACCG  41 8
LOY45_RS17365 3806469 .. 3806503 +  -3.6  -3.77464   CACACCTGCGCACAG    CTGCCACCCATTCGT GTGCAA GCGGATGC-TGGCAG     TTTCCTGGCTGATAT  55 393
LOY45_RS17370 3806856 .. 3806877 +  -2.9  -4.07568   CAGCCAGGTAACAAT           CCAGGGG GACGCAAG CGCCTGG            TTTTGGGGCCGCAGG  58 30
LOY45_RS17375 NONE
LOY45_RS17380 NONE
LOY45_RS17385 NONE
LOY45_RS17390 NONE
LOY45_RS17395 3810075 .. 3810093 +  -4.4  -2.52464   GCGGCAAACCTGTGG             GAGCTGGC CTT GCCAGCGA             TGGGTTGCAAGGCAA  43 96
LOY45_RS17415 NONE
        pncB NONE
        nadE 3814699 .. 3814712 +  -2.3  -3.21395   CTGCCATCCTGAATG               GACTC ACCG GAGAC                TGTTGTGCAACGCCT  42 29
LOY45_RS17430 NONE
LOY45_RS17435 3817063 .. 3817077 +  -2.1  -2.73875   AACACAGCTGGCGCC              TGTGCC TGAT GGC-CA               TCGTCTTCGCCGACC  39 238
LOY45_RS17445 3818055 .. 3818081 +  -3.7  -2.78679   GAATGATTTGCACAC         GCGGCGA ACCTTGTACAAAA TCGCCGC         CTTTGCCTCGAAAGG  43 56
LOY45_RS17450 NONE
LOY45_RS17455 3818929 .. 3818983 +  -4.6  -3.79906   AGTTGATTTGGGCAT CTTTCCCTGCATGTCGATG-AGGTGCGC GTG GCGCGTCTGCATT-ACA--CAGGGAAGG TTGTTGTGCAGATCG  57 114
LOY45_RS17460 NONE
LOY45_RS17465 NONE
LOY45_RS17470 NONE
LOY45_RS17475 3820675 .. 3820696 +  -2.1    -4.386   CAGTCTTCAGCCCCT           TTCCCGGGG GACG TCGCGGGCA            TTTTATGGAGCATTC  63 402
LOY45_RS17480 3822810 .. 3822826 +  -6.5  -3.23045   ATCCAGGACCAGCAG              TGCGCGT TTT GCGTGCA              TCTTCATCTCTCCGT  54 515
LOY45_RS17490 3824255 .. 3824274 +  -9.2  -2.65774   CGCCGGCTCCCACAG            GGGTCGGT GCAG GCCGGCCC             ATTGTGGTCCCTCTC  59 79
LOY45_RS17495 NONE
LOY45_RS17500 3826427 .. 3826485 + -22.8  -2.63723   TTAGGGGCTCATCGC ---GGGGCAAGCCCGCTCCCACAGAGGAT TGCA GTCTTCTGTGGGAGCGGGCTTGCCCCGCG ATTGCTTAGTCAGCC 100 37
LOY45_RS17515 3830313 .. 3830340 +  -2.8  -2.62983   ATCATCGAGAAAGCC        GAGATCATTGAGT GAT ACT-GCTGATCTC        TGATCTGCACCTGCA  40 11
        lpxH 3831052 .. 3831064 + -10.5  -3.35679   TTTTCCCTGATTGAA                GGCCC TGC GGGCC                TTATCGCTGGCAAGG  70 31
LOY45_RS17550 3837751 .. 3837776 +  -5.3  -4.07568   GGAGCTGGCTTGCCA         GCGATGGGCTGC AAA GCAGCCCCG-GC         TTTTAGCCCAAGGCA  64 96
        acnB 3841284 .. 3841303 + -16.4  -5.07486   TTAGCGTGAAAAAAA            GCCCCGCC AATT GGCGGGGC             TTTTTATTGGGCCTG 100 47
LOY45_RS17600 NONE
LOY45_RS17605 3853387 .. 3853397 +  -3.2  -2.87344   CGTGAAGGCTGACGC                 CTGA TGT TCGG                 TCTCTGGAAAACCTG  41 22
LOY45_RS17610 3854369 .. 3854420 +  -7.9  -2.82516   ACGTGCCGAGCTGAC TCAACACTCC-GCCTGCGTCAGCC TGCCC GGCTGGCGCGGGCTGGAGACTCAA TGTCGTAGTCAGCGC  54 27
        pabB 3855859 .. 3855892 + -16.9  -2.52543   ATCGCTGGCAAGCCA     GCTCCCACAGGTT GGGTGGTG AACCTGTGGGAGC      TGGCTTGCCAGCGAT  85 45
LOY45_RS17625 3857882 .. 3857938 +  -3.4  -3.21218   ACGGGCGCGCTCCGA CGCCTG-CGCGTTGGCGGTCACCGCCAG CAC CTGGCAG-GCCCGCCTGCCTGTCCGTCG TTCATGCTCGCGGAT  45 510
LOY45_RS17680 3869529 .. 3869541 +  -2.6  -3.18264   GAGGCAAGTCATACC                CGGG AAATC CTCG                TTCCTGGGTAAAAAC  42 2
LOY45_RS17685 3870810 .. 3870829 + -16.4  -5.14163   AGGCAGATACAACAA            CGCCGGGC AATT GCCCGGCG             TTTTTGTTGGTGCGT 100 42
        oprI 3871950 .. 3871971 + -15.9   -5.4505   GGATTGTTATTGGAA           GCCGACCCA CTTG TGGGTCGGC            TTTTTTATTGCCGCC 100 51
LOY45_RS17715 NONE
LOY45_RS17720 3877341 .. 3877372 +  -8.1  -5.00616   CACATCTCGCCGGAA     GGGGTCTGGACGATG ACTT CATCG-CC-GACCTC      TTTTTTCAGCAACGC  95 78
LOY45_RS17730 3879492 .. 3879527 +  -2.6  -4.15543   CCGCCTCGCAAAACC   CGCTGGGCTGCGGTGG GAGGCG TCACCGAA-C-CAGCG    TTTTAGCGGTATTTG  56 382
LOY45_RS17750 3882839 .. 3882863 +  -7.1  -3.61178   ATGATCGAGTCGGCA          CAATGATGGCA CCT TGCCAACAATG          TTTCCGCTCAATCAG  60 60
LOY45_RS17755 3884413 .. 3884440 +  -4.9  -3.64703   TCACCGGGGCCGCAC        TATTCTTCAGG CAAGCC CCTGAGGAAAA         TTTCCATGAGCAAAC  54 69
LOY45_RS17760 3885002 .. 3885012 +  -8.2   -4.1822   CAGGTCAAGGTGCTG                 CCGG ACG CCGG                 TTTGTTCAGGTGCGA  72 219
LOY45_RS17780 3887989 .. 3888027 +  -6.7  -2.52543   ATCGCTGGCAAGCCA  GCTCCCAC-AGGTAAAGT GCAC ACCGGACCTCGTGGGAGC   TGGCTTGCCAGCGAT  50 54
LOY45_RS17815 3897003 .. 3897049 +  -2.2  -4.18018   CCAGGGAGAACTGCA CGCCCAG-GCG-CTGGCAG-GCC TCCA GGCACTGGCTGACGCGCTGGATG TTTTCAATGGCGACC  58 467
LOY45_RS17830 3900542 .. 3900562 +   -14  -5.24129   GGCAACACGGAAAAA            GCGGCAGG CTGAA CCTGCCGC            TTTTTTCTGCCCGCG 100 45
LOY45_RS17835 NONE
LOY45_RS17840 NONE
LOY45_RS17845 NONE
LOY45_RS17850 NONE
LOY45_RS17855 NONE
LOY45_RS17860 3905614 .. 3905625 +  -7.2  -2.58544   TAAAGGCGCGGTTTA                CGCG GTGA CGCG                 ATTGTCCGGCTGGGC  53 38
LOY45_RS17870 3907198 .. 3907211 +  -3.7  -2.87501   GAGCACACGCCAAAA               GCGCC GCTC GGCAC                TCCTCTTTACTGGCA  43 158
LOY45_RS17875 3909141 .. 3909166 + -14.8  -2.74144   GACACGCGTAAACAA         CAAAGGGGCC ATTTGC GGCCCCTTTG          CTTTACCCCTCCCCG  81 39
LOY45_RS17895 3912623 .. 3912665 +  -4.7   -3.4331   CGCATCGCGGGTCAA GCCCGCTCCCACAAGAGCAGC GTA GC-GCCCTGGTGGG-GCAAGC ATTTTTGCTGGAGCT  52 58
LOY45_RS17900 3913986 .. 3914014 +  -9.5  -2.62263   CTCGAACTGCAACGC        CTTCGCCTGCTCG GGG TGAGCCCGCGAAG        TGGTGTACAGCACAT  55 403
LOY45_RS17910 NONE
LOY45_RS17915 NONE
        arsH 3916924 .. 3916954 +  -5.3  -3.65902   AGCAAAACGTTCTGC       CGGGCCTGCTCGA TATCC TTGAGCGCGGCCG       TTTCGGTCACCTCGA  55 492
LOY45_RS17945 3923137 .. 3923152 +    -9  -3.53012   TGAGGCTACCGTAGG              GGATGG CTCG CCATCC               TTTACCGGCCAGCGC  62 383
        dusA 3924683 .. 3924725 +  -8.5  -2.65112   GGCTTATCCCCTTCG CCC-CGC-CTGCCAGCCAGC CCTTGA GC-GGCTGGCAGCGCTCGGG TAATGTCGATCCATT  56 73
         tal 3925767 .. 3925805 +  -6.8  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAAGGTCC GATGAATGCA GTACCT-GTGGGAGC   TGGCTTGCCAGCGAT  50 105
LOY45_RS17965 3927884 .. 3927930 +  -4.5  -3.44051   AGTCGTTCAGACCCA TGAGGATCTTGTGCGCTTCCAG TACC TTGGAA-CGCACCACGTCTTCG TTCTGGTCCTGGGAC  51 121
LOY45_RS17980 3930061 .. 3930078 + -12.7   -4.4078   TGCAGACACAAAAAA             GGCGACC TGAA GGTCGCC              TTTTGCTTGCCCGCC  95 42
LOY45_RS17990 3931611 .. 3931621 +  -2.4  -3.54424   TTACTCTAGTAGACA                 GGGC ATG GACC                 TTTCACCCACTGCCG  48 85
LOY45_RS17995 3931958 .. 3931977 + -10.7  -4.90266   CACCTGAATAAAAAA            GCCCCGT CATCGA ACGGGGC             TTTTTCGTTACTGGC 100 44
LOY45_RS18010 3934205 .. 3934223 +  -9.5  -3.35679   ATGTGCTTGAAGAGC             GCGGCGC CTGAT GCGTCGC             TTGTCCCTCGGGAGC  68 15
LOY45_RS18015 3935966 .. 3936001 +  -4.6  -4.05446   GATCTGCGCCGGCGT    GGCGCCGATGGTGCGCA GGA TG-GCGATGTCGGCACC    TTTGTCGTTGACCAC  62 430
LOY45_RS18035 3939587 .. 3939599 +  -2.7  -4.15044   GAGCCAAGCGCCTCC                TGAGT TTC ACTTA                TTTGTTGAAGGAACA  58 23
LOY45_RS18040 3940694 .. 3940714 +  -6.8  -2.62616   CCTGGGTCAGTTCCT            GCTCGTTC TTGCC GATCGAGC            TGATCTCCGGAATGG  47 379
         mfd NONE
LOY45_RS18065 3948970 .. 3948988 +  -3.8  -3.19389   GCCGCCTGCGCCACA             GCTATGAT CAA GTCATTGC             TTCGTACCTCGCTTC  46 219
LOY45_RS18070 3951436 .. 3951460 + -14.3  -2.52543   ATCGCTGGCAAGCCA          GCTCCCACACG GAC CCTGTGGGAGC          TGGCTTGCCAGCGAT  78 45
        lexA NONE
LOY45_RS18095 3955157 .. 3955168 +  -4.4  -3.51232   GGCTGATACTCAGGT                CTGT TTCA ACAG                 TTGATTTCGCCAGGC  52 35
LOY45_RS18135 3964324 .. 3964341 +  -4.9   -5.4833   GGTTTCCAGTTCGCG             CTGCAGCT TGT AGCTG-AG             TTTTTTCTTCGGTGC  93 263
LOY45_RS18145 NONE
LOY45_RS18160 3971298 .. 3971313 +  -5.4  -3.33261   ACCAGCCCGTAAAAT              CTGGCT ATTC AGTCAG               TTATCAGAGTTCGCG  52 232
LOY45_RS18165 NONE
LOY45_RS18170 3973537 .. 3973561 +  -9.3  -3.01791   GTATTGGCGGTCACC          TGGCTGCCG AAACCAC CGGTAGCCA          TGTTCAGAAACACCT  59 487
LOY45_RS18180 NONE
LOY45_RS18185 3977277 .. 3977308 + -11.5  -2.64099   ACCAGGGTCGAGGCC      GGGTTGCCGGGCA AGCCGA TGACCGGCACCCC       CTTGTAGTGACCGAA  62 321
LOY45_RS18200 3979150 .. 3979164 +  -3.4  -3.28712   TGACCTGATCGACAA               GCCGCT GTC GGGGGC               TTGTCGAGGAGAGAG  46 38
LOY45_RS18205 3979295 .. 3979312 +  -9.8  -4.72272   TTTACTCAGCGAAAA             GCCCGC CCACGT GCGGGC              TTTTTCGTGCCCGGC  91 42
LOY45_RS18210 3979893 .. 3979922 + -19.5  -3.53012   TTGGCGGGCCAGAAA       CAAACAAGCCCCT GAAC AGGGGCTTGTTTG        TTTCCAGCAAAGCGA 100 134
LOY45_RS18230 3985982 .. 3985999 + -14.1  -5.06414   ACCCGAATTCTTCAA             CCCGGCG CACG CGCCGGG              TTTTTATTGCCCGCG 100 44
LOY45_RS18240 3989008 .. 3989022 + -12.8  -3.68738   TTCGCTGGCCTGATC               GCCGGC AAC GCCGGC               TTGTGTCTTGAGGTA  81 334
LOY45_RS18250 3990454 .. 3990472 + -10.2  -3.30771   CCAGGTTTCCAGCAA             GGCGGCAC TGC GTGCCGGC             TTCTCGACGATGTCG  67 320
        acnA 3994298 .. 3994321 + -15.3  -3.80625   GCAGCCTGAAGTGAT          GGCCCGGTC CCTGGT GACCGGGCC           TTTGCCTTATGCAGC  95 32
LOY45_RS18265 3995228 .. 3995240 +  -3.4  -4.52589   CGCTGTGAACATGCG                GTCA TTAGC TGAC                TTTTGTGTCAAAAAC  67 33
LOY45_RS18270 3997195 .. 3997209 +  -4.9  -4.11216   GGGCGGTCATGTGCA               CCCGC AGCTG GTGGG               TTTTGCCAGTGACCG  64 244
LOY45_RS18295 4001667 .. 4001680 +  -9.5  -3.28712   ACACCGCCACCAGCC               CGGCC AGCG GGCCG                TTGTGCAGGAAGCCC  62 431
LOY45_RS18305 NONE
LOY45_RS18310 NONE
LOY45_RS18315 4004104 .. 4004117 +  -3.1   -4.1299   AGGGCCCCTGGTGGG               GCAAG AATT TTTGC                TTACTTTTTTTTCGA  58 324
LOY45_RS18320 4005608 .. 4005644 + -15.1  -3.14881   GCCCGAGCTGATCAA    CCGCCTGTACTGCCCGG CAA CCGGGCAGTACAGGAAA    TTACTGACACACTTG  83 30
LOY45_RS18325 NONE
        dacB 4012237 .. 4012261 + -15.7  -3.12351   CGCACCGCCGCCGTT          CAGCCCTGAGC CTG GCTCAGGGCAG          TTCGCTCTCGACCCG  85 17
         rmf 4017762 .. 4017780 + -13.8  -5.28176   CGGGCTAAGGCCCAG             GGGCCCCT TGA GGGGGCCC             TTTTTTATGCCTGCG 100 85
LOY45_RS18420 NONE
LOY45_RS18425 4031679 .. 4031736 + -23.5  -3.68506   CGGTTGCCCCCTTCA CGACAAAGACGTCGCACCCCCACTCGC GCAA GCGGGTCGGGTGGCGACGTCTTTTTCG TTTCCGTCCCTGTTC 100 90
LOY45_RS18430 NONE
LOY45_RS18435 4034652 .. 4034665 +  -2.3  -3.57144   ATCAGCCTGCTAAAA               GGCTG ACGG CACCC                TTTGCCGATGAGGAA  48 20
        cobA 4035442 .. 4035459 + -14.1  -4.18762   CGCAGGCAAAGAAAA             GCCCGGC CTAG GCCGGGC              TTTTCAGTAGGGCTT 100 43
LOY45_RS18485 4044767 .. 4044800 + -11.1  -3.42056   AGTAGCAAGCTGAAA     GCTGCAAGCGGAA ACAACGCA TTCCACTTGCAGC      TTGTAGCTTAAAGCT  75 129
LOY45_RS18495 4050389 .. 4050400 +  -3.6  -4.15044   GTCAGCGAGCTGTAA                TCGC CCAC GCGG                 TTTCTTGACAAGGAA  60 26
LOY45_RS18500 4051188 .. 4051208 +  -8.2  -4.88918   GACCCCCCTATAAGC            GGGCGCTG CTGCA TGGCGCCC            TTTTGTTTGACCTAC  89 39
        lhgO NONE
LOY45_RS18510 4054029 .. 4054044 +    -6  -4.07568   TGCATTAAAGTATCA              GCCCCC GCCC GGGTGC               TTTTACGCCGCACGC  66 204
LOY45_RS18515 NONE
LOY45_RS18520 NONE
LOY45_RS18525 NONE
LOY45_RS18530 NONE
LOY45_RS18535 NONE
LOY45_RS18540 NONE
LOY45_RS18545 NONE
LOY45_RS18550 4065816 .. 4065841 +  -4.8  -2.75712   AATGGCCTGAGTACG         GTGGAGG-TCA GCGGA TGATCCTCTAC         TCGTTCCGTCGCTGC  44 8
LOY45_RS18555 4066443 .. 4066483 + -11.9  -2.52543   ATCGCTGGCAAGCCA GCTCCCA-CAGGGGCCTG GGCATG CAGGGCCATGGTGGGAGC  TGGCTTGCCAGCGAT  70 45
LOY45_RS18615 4080263 .. 4080289 +  -2.8   -4.3739   CGATATGCCAGGGCG         CCTCCTTGAGCA CCT TGCGCGTGGAGA         TTTTGTGCCCGCGTG  66 517
LOY45_RS18625 4081893 .. 4081919 +  -6.4  -3.59262   AAAGGCCCCGGCTTC         GACTTCCCGGCG CAG CGCCAGCAAGGC         TTTGGCGGTGTACAG  59 103
LOY45_RS18640 NONE
LOY45_RS18645 4087509 .. 4087521 +  -9.1  -3.29471   TGCCGGTGGCGGTAC                CGGCT TCG AGCCG                TTGCTGTCGTCCACC  62 349
LOY45_RS18655 4090218 .. 4090247 +  -9.9  -3.05463   GCCGCGCTCGCCCTT       CCGGCGCTGGGCGG CCG CCTCCCAG-GCAGG       TTCGGTCGGGGAGAT  60 157
LOY45_RS18765 4111134 .. 4111147 +  -3.1  -3.48395   CCGGGCAAACCTGCC               CGC-TC AAG GACGCG               TTATCTGCCAAAGGT  48 49
LOY45_RS18770 NONE
LOY45_RS18825 NONE
LOY45_RS18830 4123458 .. 4123496 +  -7.6  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACA-GGT-ATGT CATTC ACAGGACCATGTGGGAGC  TGGCTTGCCAGCGAT  53 67
LOY45_RS18840 NONE
LOY45_RS18845 4127192 .. 4127217 +  -9.8  -5.37593   CAAACACCTGAAAAA         CCTCCAGTTGC CCTGA GCA-CTGGAGG         TTTTTTCGTTTCCGA 100 39
LOY45_RS18870 4131629 .. 4131654 +  -6.1  -5.81412   TCCTAATGGTCTTAA         CCCGGATTC ACCCCCCA GAACCCGGG          TTTTTTTTGCCTGCG 100 199
LOY45_RS18935 4142198 .. 4142217 + -11.4  -4.65895   CTACACAAATAAAAA            GCCGACCT CGAA GGGTCGGC             TTTTTCAATGCACCA  95 90
         rne 4148763 .. 4148786 + -19.6  -5.26918   TCCAGGCTGAAAAAA          GCCCCGCCAG GTAA CTGGCGGGGC           TTTTTTATGGCCTGT 100 44
LOY45_RS19000 NONE
LOY45_RS19020 4161507 .. 4161538 + -15.2  -4.72272   TAAGGGCCGGGACAT      CGGGCGCCGGGAG CCGTATA CTCCCG-CGCCCG      TTTTTGCTCAAGAGG 100 38
LOY45_RS19025 4162047 .. 4162066 + -13.6  -4.78326   CGAGACGAAAAAAAA            CGCCGTTC AAAC GAACGGCG             TTTCTTTATTTGGAG 100 102
LOY45_RS19055 4164028 .. 4164050 +  -7.6  -3.02144   CACTGTCGCAGGCAA           TGTGCCCGGG AAA CGCGTGCACA           TCTTCCACCCGCTGG  54 290
LOY45_RS19070 4168069 .. 4168094 +  -8.9   -4.7254   TTGACCACCAGCAGC         GCCTTGGCAGG GTAG TCGGCCAGGGC          TTTTTGCTCACCGGT  91 424
LOY45_RS19085 4170011 .. 4170031 + -10.4  -3.19157   TCAGCCCTGACATCA           CCCGC-CGC TCTG GCGTGCGGG            TTGCTGGAATTCGTC  68 101
        htpX 4171070 .. 4171087 + -12.7  -4.35524   ACCCGCTACAAAAAA             GGGCGAC TTCG GTCGCCC              TTTTGCATTTCAGCG  93 47
LOY45_RS19100 4172695 .. 4172746 +   -15  -2.52543   GAGCGCTGGCAAGTC CCGCCCACAGAATTGGCGCCGCTC TTGG GAGCGGTGCCGGACCTGTGGGAGC TGGCTTGCCAGCGAT  80 100
LOY45_RS19115 4177844 .. 4177883 + -10.8  -3.21099   TGCGTTGCAGGCTCT  CGGCCAGGGCCTGCATG CCCGCTT CATCCAG-CCCTGGCTG  TTCCTCATGCACCGC  65 131
LOY45_RS19130 NONE
LOY45_RS19140 NONE
LOY45_RS19145 4182575 .. 4182595 +  -2.4  -3.07332   CCGAAAAATTATCTT            GCGCACTA AATAA TTGCGCGC            TAATTTAATTTCCGT  42 75
LOY45_RS19150 4183107 .. 4183122 + -11.8  -4.81249   CCAGGCATAAAAAAA              CCCGGC CAAG GCCGGG               TTTTTCGATTTCGCA 100 51
LOY45_RS19165 NONE
LOY45_RS19170 4186305 .. 4186324 +  -6.4   -3.1372   TGGTCATGCGCAAGC            GCAG-GTCC AAC GGGCTCTGC            TCTTGCTCGCGACTG  51 430
LOY45_RS19180 4188008 .. 4188030 +  -5.4  -3.10597   GCCGGCACCAGGCCA           ACCGCCAGGC CGC GCTTGGCGAA           CTTTTCCATCAGGCG  47 204
LOY45_RS19190 4190277 .. 4190293 +    -5  -3.40403   CACGCAGGCGGCTGA              CGCCGG ACTGA CAGGCG              TTGTACTGACGGCGC  51 279
LOY45_RS19220 NONE
LOY45_RS19225 4199801 .. 4199817 +  -5.1  -3.66178   CCGCCGTCAGAATGG              TTCGCTA CCC TCGCGAA              TTTCCACTTCCAGCA  56 282
LOY45_RS19240 NONE
LOY45_RS19245 NONE
LOY45_RS19250 4203338 .. 4203360 +  -9.8  -3.85698   GGCTGTAACGGCAGG           CCTCAGGCCG AGC TGCCCTGAGG           TTTGTGCGCCACAAA  75 33
LOY45_RS19260 4205887 .. 4205897 +  -8.2  -3.15663   TGCTGGCTGGCGAAG                 GCGC GCA GCGC                 TTCGTCGGCCTCGGT  57 495
LOY45_RS19300 4213939 .. 4213960 +  -2.1  -3.15574   AGGATCCAGAGAATC           TTGGCGCCA CCAC TGGCACCGC            TCTTGATCACATTGA  42 150
LOY45_RS19310 4215590 .. 4215603 +  -2.3   -4.1196   GTCTTCTTCGCGCAT               GCAGC CAGC GCTGA                TTTTGCCGATGAGTT  58 505
LOY45_RS19325 4216767 .. 4216824 + -30.7  -3.93695   TTGCCGACTTATCGG TAACTTCGCGGGGCAAGCCCGCTCCTA CCTG TAGGAGCGGGCTTGCCCCGCGATGGCG TTTGTCAGTCGTCAA 100 23
LOY45_RS19345 NONE
LOY45_RS19350 4221668 .. 4221726 + -21.5  -3.05596   TCACCGCTAAAAAGC ---ATCGCTGGCAAGCCAGCTCCCACAA GGGCAA TTGTGGGAGCTGGCTTGCCAGCGATAGA TTCACTGCAAACCTG 100 31
LOY45_RS19360 4223450 .. 4223472 +  -6.1  -4.18018   AGCGACCGCCCGGCA           GCCGGGCGG AACCA CCTCACGGC           TTTTCGGTCCAACGC  66 40
LOY45_RS19365 4223864 .. 4223880 +    -5  -3.05384   AGTCGCGTAAACTAC              GCCGCC CAGGC GGAGGC              TTACATGCAAGACGA  50 57
LOY45_RS19370 NONE
        folE 4225074 .. 4225093 + -10.7  -5.88565   CGGGCCAGACTGCAA            GCCGACC TGTCGT GGTCGGC             TTTTTTTATTCTGAG 100 42
LOY45_RS19380 4225643 .. 4225666 +    -3  -3.91897   GTAGGTATCGCCCAC          CAGGTACGGC GTTA GCTGCAGCTG           TTTCTCCATCACCCG  56 183
LOY45_RS19390 4227520 .. 4227544 + -16.5  -3.19192   GTCGTTGCCCAGCTG          CGCCAGCTCGA TAC TTGAGCTGGCG          TTGCCTTGCATGGCC  89 113
LOY45_RS19405 NONE
LOY45_RS19415 4234485 .. 4234504 + -10.6  -3.04461   CTTGCGGCTCGATAT            CCAGGCCG ATGC CGGCCAGG             TCTTCACGCTCCATG  63 314
LOY45_RS19425 4235251 .. 4235267 +  -6.5  -3.28712   CTTCTGCACGGCCCG              GCAACGC ACG GCGTTAC              TTATAGCGCGCCGCC  56 43
LOY45_RS19440 NONE
LOY45_RS19445 4238358 .. 4238381 +  -9.6  -3.05596   CTCTTCATACAGCTT          TTCACCGGGT CGCA AGCCGGTGAA           TTCGATGGCGACATC  60 334
LOY45_RS19610 NONE
        ubiG NONE
        mupP 4280865 .. 4280878 +  -6.7  -3.05384   TGAAACCTTCGTACT               GGCAA GGCT TTGCC                TTGCATCGCCGGCAA  54 38
LOY45_RS19625 4281720 .. 4281766 + -13.8  -3.28637   AACGCCCAGTAAGCT CAGCCCTCGGCCAGCTCCGCCCG GGCC CGGGCGG-GCTG-CTG-GCGCTG TTCCTGCTCTTGCTG  81 29
LOY45_RS19665 4291298 .. 4291315 +    -4  -2.64274   AGCAGGCGAGCAGCA             GCCAGC CTTGCA GCGGGC              TCAGTTTCAGCGCCT  41 317
        mnmC 4295919 .. 4295937 + -11.7  -3.53012   CCGGTCAGTTTCCAT             GTGCCCG CGGTT CGGGCAC             TTTCCCCAACGGCAA  75 127
LOY45_RS19685 NONE
         ngg NONE
LOY45_RS19695 4300716 .. 4300766 +    -7  -3.25015   TAGCGCCTACACAGC CAGGACAGGTTTCGCGTAGCATGG CGGTA CCTT-TT-CGCCAGACCTGTCCTG TTCATGCTGATTCCC  56 38
LOY45_RS19700 4301276 .. 4301305 +  -2.1  -4.23892   ACAAATCCCACTTTC       CCAAGCGACTTTG CCTA CAGATTTCCTTGG        TTTTCGCTCCTTCAA  60 304
LOY45_RS19720 4302936 .. 4302983 +   -20  -2.52896   GCAAGCCATAAGCAG CAAGCCGCCAGTCAAAGCAGTA CGCG TACGGCTTCAACTGGCGGCTTG TAGCTTGGAGCGTGC  95 48
LOY45_RS19740 4307857 .. 4307882 + -10.5  -2.52543   AGGCGTCGCACCGCC         GCTCCCACA ACAGATCC TGTGGGAGC          TGGCTTGCCAGCGAT  64 60
LOY45_RS19750 NONE
LOY45_RS19755 4310742 .. 4310754 +  -2.6   -4.2828   AGGTAGCTGAGCACC                CCGG CGCCA CTGG                TTTTGGTCGCTCCCG  63 156
        minC 4313748 .. 4313760 +  -4.8  -4.87803   TTTTTGTATTTTTAG                GGAC TCGAC GTCC                TTTTCTTTAGGGGTG  78 88
        minD NONE
        minE 4314848 .. 4314858 +  -6.8  -4.07885   ATCACCCTGCCCGAT                 CGCT GAT AGCG                 TTTTCCGGCACCCTG  68 20
LOY45_RS19785 4315631 .. 4315644 +  -2.3  -2.87132   TCGCCGGCAAGGCCG               GCTCC CACA GGACC                TGTGTGGGAGCCGAC  39 59
LOY45_RS19790 4317055 .. 4317081 + -12.3  -2.52543   ATCGCTGGCAAGCCA         GCTCCCACATG CCGAA CCTGTGGGAGC         TGGCTTGCCAGCGAT  70 56
LOY45_RS19795 NONE
LOY45_RS19800 4319972 .. 4319988 +  -9.3  -3.14211   GCCGACAATAGTTCG              GTGCGCG CCT CGCGCCC              TTGCTCACGGACCAT  60 440
LOY45_RS19810 4321676 .. 4321714 + -10.3  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAAGGTCCGGT GTAT GCAGTACCT-GTGGGAGC   TGGCTTGCCAGCGAT  64 77
LOY45_RS19815 NONE
LOY45_RS19820 NONE
LOY45_RS19825 NONE
LOY45_RS19830 4325171 .. 4325191 +  -2.4  -4.89852   CGCCCTCTGCGAAGT            CGCCTGAG GGTTG CACAGGAG            TTTTTCTGAATATGG  72 19
LOY45_RS19835 4325877 .. 4325914 + -12.1  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTACTG CATATAC CTG-ACCTGTGGGAGC   TGGCTTGCCAGCGAT  70 46
LOY45_RS19845 4329200 .. 4329228 + -21.1  -5.42259   ACTGTCGTGAAATAA        GGGACTGAGCGCC GCG GGTGCTCAGTCCC        TTTTTTTCAAGGTAG 100 98
LOY45_RS19850 4331421 .. 4331455 +  -8.6  -3.64703   TTCCCAGGCCAGGCT    GCGGCGGATCGC-GGC ATCCG GCTGGCG-TTCGCCGC    TTTCGATCAGCGCCA  65 417
LOY45_RS19875 4334281 .. 4334308 +  -6.2  -3.14211   TGCACACGCCAAGCT        CTGCCCTTCTTG ATGA CTAGAGGCGCAG         TTCATGGGCAAGCCT  52 46
LOY45_RS19880 NONE
LOY45_RS19885 NONE
LOY45_RS19890 4338311 .. 4338338 +  -7.6  -3.15544   CTCGCACAGCCATTG        CGCCGGCACTGCC AGG GGCAAGGC-GGCG        TTGCTGCAGATGCCG  55 79
         map 4347394 .. 4347410 + -15.1  -2.89564   CGGCGAATCCGGTTT              GCCGCGC ACC GCGCGGC              TCTCTACAATCCGCG  82 43
LOY45_RS19920 NONE
LOY45_RS19925 4351207 .. 4351219 +  -7.7  -3.09492   TAGCTGAAGCGCACG                TCCAG GCG CTGGA                TCTTGCCGTTCGGGG  55 374
        rdgC 4353989 .. 4354036 +  -9.9  -3.53811   CTCATCGCCGGCAAG GCCGGCTCCCACAATGGATCTGT GTAC GCCGAACC-T-GTGGGAGCTGGC TTTGCCAGCGATCGA  70 63
LOY45_RS19950 4355029 .. 4355041 +  -3.3  -3.14344   AGGTGGAGCTTAAAA                CCCAG CCG CTCGG                TTAATGCCAACACTG  43 9
        sugE 4355722 .. 4355735 +  -3.7  -2.81464   CAACGCCAACGGGAT               CACCG GCAC CGGCG                TCTGCTCGATGATCC  43 221
LOY45_RS19970 4360320 .. 4360343 +  -4.4  -3.58905   TTATGGCGGTTGTAC          GTGGGGCACC TTCG GGTGCGCCGG           TTCTCTGTCACCGGT  54 353
LOY45_RS19975 NONE
LOY45_RS19985 4362732 .. 4362744 +  -3.3  -4.41895   CGAGGTTCGCTGTCA                GGCTG AAT CACCC                TTTTGCTTCGGAGTT  64 114
LOY45_RS19990 4366247 .. 4366264 + -10.5  -3.09516   TCCAGTAAGGGCACT             GGCGGCC AGCG GGTCGCC              TTCGCTCATGGCCCG  63 33
LOY45_RS20005 4369431 .. 4369450 + -16.4  -5.28778   GCTGCAAACGCTCAA            GCCCCGCC CTCT GGCGGGGC             TTTTTTATGCCTGGT 100 51
LOY45_RS20010 4370237 .. 4370264 +  -9.3  -2.95116   ACCTGCATCGCTCCT        GTGACTCTTCAG GCCTG CTGA-GAGTCAC        TGCTTTCCATAATCG  61 5
LOY45_RS20015 4371684 .. 4371699 +  -7.5  -5.28778   GCACCACTAAAAAAA              CCGCC TTCATT GGCGG               TTTTTTATGCCTGAT  91 46
LOY45_RS20025 4373066 .. 4373080 + -11.4  -3.35813   ATCGCCGCCTTGAAC               GCCGGA TCA TCCGGC               TTGGTTCGGCTGGAG  70 75
LOY45_RS20100 NONE
LOY45_RS20105 4386746 .. 4386760 + -12.8  -3.68738   GCTATGCGGCCCATC               GCCGGC AAG GCCGGC               TTGTGTCTTGAGGTA  81 51
LOY45_RS20110 4388222 .. 4388251 +  -9.9  -2.75382   CTCTGACGGCAGCGT       CGCCAGG-GTCTGC AGG GCGGGCGCCAGGCG       TAGTTCAATGCGCTC  56 350
        purM NONE
        purN NONE
LOY45_RS20155 4395848 .. 4395864 + -10.8   -5.4756   TGCTAGTAGCCGAAA              CCCCGC CTGGT GCGGGG              TTTTTTATTGCCCTT 100 54
LOY45_RS20160 4396678 .. 4396690 +  -3.3  -5.16038   CTCGACCTGGCCTTT                GTGCT CCA GGCGC                TTTTGTTTCTTCTGT  86 506
LOY45_RS20200 4407591 .. 4407614 +  -9.6   -3.3907   AACCCTGGCTGACCT          GGGGCAAG CCTTGATC CTTGCCCC           TTGGTTAAACTTTCA  70 40
LOY45_RS20205 NONE
LOY45_RS20210 NONE
LOY45_RS20215 4409786 .. 4409804 + -10.2  -4.67556   CACCGTGAAGCCGAT             GCCCAGCG CTT CGCTGGCC             TTTTTCAGGTCTTCT  91 299
        arsC NONE
        wrbA NONE
LOY45_RS20235 4411554 .. 4411577 + -13.2  -2.52543   ATCGCTGGCAAGCCA          GCTCCCACAG GGTT TTGTGGGAGC           TGGCTTGCCAGCGAT  72 52
LOY45_RS20250 4414019 .. 4414042 + -18.2  -2.63596   TAGGTGCAACAACCT          TCAGGCCGCC GCAA GGCGGCCTGA           TGCTGTGCGCTGACA  86 68
LOY45_RS20255 4414697 .. 4414714 + -11.3  -4.74103   CGCAGACACAAAAAA             GCCCATC CGAA GATGGGC              TTTTTGCGTTACGCA 100 110
LOY45_RS20280 4419992 .. 4420003 +    -3  -3.05844   CGGATCTGCAGGCGT                TCTT CAAG AAGA                 TCTTCAAGTAAACCG  43 3
LOY45_RS20285 4420983 .. 4421031 +  -3.5  -3.53091   GTACGGCGCCGACGC CGGCCCGCAGCATCCTGGCTGAC AGC GGCATACAAGGGGCTGCCGGGCG TTTGCAGCAGCACCT  49 108
LOY45_RS20305 4427440 .. 4427463 + -14.6  -3.53811   AGCGCCTGAAAGCTG          GCCAGCTCTC CTGT GGGAGCTGGC           TTTGCCAGCGATAGG  85 40
LOY45_RS20310 4428935 .. 4428952 + -12.7  -5.73978   TGTTCTACAAGAAAA             GGCTGCC GCTA GGCAGCC              TTTTTTATTTGTCCT 100 53
LOY45_RS20320 4430715 .. 4430737 + -10.5  -3.55444   GAGCGAAAATACGCC           TGCGCCCCG CTCTA CCGGGCGCA           TTTCGCGGGTGCGGC  74 112
LOY45_RS20325 4431330 .. 4431364 + -19.3  -3.17075   TAAGCGCCCTTGCGA     GGACACGTGGGGCCG ACACC CGGCCCCACGTGATC     TTGCCTTCACCGCGG 100 38
LOY45_RS20370 4440645 .. 4440659 +  -4.2  -2.91264   GAGGCAGGCAACTAA               TCGAAG CAG CGTCGA               TCTGTAGATAAGGCA  46 26
LOY45_RS20375 4442021 .. 4442033 +  -6.9  -2.51547   GATCATCACCCAGGA                CGCCC ACA GGGTG                CTGTTGCTGTCGAAC  47 457
LOY45_RS20385 NONE
LOY45_RS20390 4446753 .. 4446776 +  -6.6  -3.25823   CGCGCCGGGCTGTCG          CACACCGGCA GCTC TGCCAGGGTG           TTGGTGTAGGCGCAA  54 248
LOY45_RS20400 4448722 .. 4448736 + -12.8  -2.72144   GATCAGGCCCGCAAG               CGCCGC TGC GCGGCG               ATTTCCGGCAGGTCC  73 91
LOY45_RS20410 4450678 .. 4450704 +  -3.5  -3.07113   GCCGTCCTGTTCATA         CTCGAAGCCCG GGCTG CGGGCGCCCAG         TTGCCTCACATAGTG  46 270
LOY45_RS20420 4452591 .. 4452607 +  -9.4  -3.14132   TGCGCGGCGCCTTGA              CCTGGC TGCGC GCCAGG              TTGATGGCCGCGACC  60 443
        rapA 4460013 .. 4460026 +  -2.3  -3.87815   TCGCTGGCAAAGCCA               GCTCC CACA GGATC                TTTATCAACCTGCAG  54 56
LOY45_RS20465 4464089 .. 4464100 +  -2.2   -3.5936   CGTGCCACTTCACCG                GCTCG AAA CG-GC                TTTCGGCCATTTGCG  50 110
LOY45_RS20475 4467180 .. 4467238 + -31.4   -3.0752   GATTACTGATTGAAA G-C--ATCGCGGGGCCAGCCCGCTCCTAC ATCT GTAGGAGCGGGCTGGCCCCGCGATCAGAC TGTTACCGTACTCTC 100 32
LOY45_RS20485 4469172 .. 4469193 + -12.3  -4.65263   ACTATATGACTACAA           GCCCACTGT GCGA GCAGTGGGC            TTTGTTTTACGAGGT  95 50
        livH NONE
LOY45_RS20495 NONE
        livG NONE
LOY45_RS20505 4473049 .. 4473060 +  -7.2   -5.4505   CAACATCAGGAAAAA                GGCC TTCG GGCC                 TTTTTTCTTGCCCGC  93 57
LOY45_RS20510 4473700 .. 4473710 +  -5.4  -3.61517   AATTCATGCTGCTGG                 TGGT ACA ACCA                 TTCTTCACGGCCACT  55 326
LOY45_RS20520 4475065 .. 4475079 +  -4.2  -3.96298   TGGCGGCACCTTTTG               CTCGAG ATG CTGGAG               TTTGCTTGATGCGTG  59 73
LOY45_RS20525 4475846 .. 4475869 +  -5.2  -3.04144   GCCGCCGGCCGTTCA          TGGCCGGG ATACTGGA CCCTGCCA           TGTTACGAATCACCG  48 109
LOY45_RS20530 4477517 .. 4477532 +  -3.9  -3.00946   ATCGCCGGCAACGCC              GGCTC CCACAA GGGCC               TGATTTGTGGGAGCC  44 60
        nhaA 4480103 .. 4480128 + -16.9  -4.72272   CAAGGCAATAAAAAA         CCCCGAC-CGGC ATT GCCGAGTCGGGG         TTTTTAATGGGGGGG 100 45
LOY45_RS20550 4481367 .. 4481384 + -12.7  -3.64682   GGCCGCGAAGGGGTT             GGCCAGC AATT GCTGGCC              TTTGGCGCTTTCGTA  81 394
LOY45_RS20580 4489073 .. 4489099 +  -2.1  -5.00884   CAGCCCATCGCCGGC         AAGGCCGGCTC CCACA GGGTCGGCGTA         TTTTTTACAGGCGCT  72 65
LOY45_RS20605 NONE
LOY45_RS20610 4492862 .. 4492880 +  -2.3  -2.50016   CCAGTTACCTGGGTA            GCTGAGCC TGAT GGCCC-GC             CTGTTGCTGATCGGC  38 21
LOY45_RS20615 NONE
LOY45_RS20620 4493566 .. 4493576 +  -4.6  -3.54475   CGCGGCCCCATAGCA                 GTGG TCG CCGC                 TTGTGTCCTGCGCAG  54 42
LOY45_RS20625 NONE
LOY45_RS20630 4498437 .. 4498477 + -13.9  -2.85847   CTGCGGTCCATCGCT  GGCAAGGCCAGCTCCCACA GAA TGTGGGCGCTGGCCTGGAA  TATGGTGTGAAACTT  76 58
LOY45_RS20635 4499353 .. 4499388 + -14.8  -2.71268   TACAGCGGCAAATAA    CCATTGGGGGAACCGGT AAC GCCGGTTCCCCCA-TGA    TCGTGTCTACTGGCA  80 26
LOY45_RS20640 NONE
LOY45_RS20645 NONE
LOY45_RS20650 4501954 .. 4501970 +  -3.6  -3.13743   CAGGCCTACCGCAGC              GGCTAC CTGTT GTCGCC              TTGAATCTCACCTTT  46 5
LOY45_RS20655 4503073 .. 4503087 +  -7.1   -4.4009   GGAGTCTGCCGGCGG               CGAGG AATTC CCTCG               TTTTGTCGCCTCAGG  74 337
LOY45_RS20670 4504251 .. 4504273 +  -9.8    -5.626   TACAGCTTGAAGAAA           GCCCCGCC CTTAACA GGTGGGGC           TTTTTTTATGCCCTG 100 50
        metG 4507686 .. 4507711 + -19.7  -3.44229   ATCAAGTAAGGCTCT         CGCCCCGGCTG ATTG CGGCCGGGGCG          TTCTCATCCTCGCGT 100 32
LOY45_RS20685 4508557 .. 4508569 +  -6.2  -3.06696   GCGCGGCCATGCACC                GGCG CAGGT CGCC                TATATTCGCGAAGCC  52 231
LOY45_RS20695 NONE
LOY45_RS20700 NONE
LOY45_RS20705 NONE
         nth 4512017 .. 4512029 +  -4.7  -3.15354   TTCTCGCTATAAGGT                GCGCC AAT GGCCC                TCTTGGCTTGGAGTG  47 99
LOY45_RS20715 4512257 .. 4512273 +  -9.4  -4.63048   TCTATTAATCAAAAA              GCCTCC TTGCT GGAGGC              TTTGTTGTTTCTGGG  83 51
        pyrC NONE
         rnt 4518201 .. 4518217 + -10.8  -5.64274   TCAGGCATAAAAAAA              CCGGCC ATCAA GGCCGG              TTTTTTTATGCCTGG 100 110
LOY45_RS20755 NONE
LOY45_RS20760 4519310 .. 4519326 +  -9.4  -5.65177   AGCGAATTCCAAGAA              CCGGAC CCAGT GTCCGG              TTTTTTTATGCCTGT 100 44
         bfr 4519992 .. 4520008 + -15.1  -5.75342   TACAGGCACAAAAAA              GCCCCGC ACT GCGGGGC              TTTTTTTTGACCAAA 100 57
        argF NONE
LOY45_RS20785 4524983 .. 4525016 + -12.4  -2.85216   CTGATGTAAGGCCAA     TCGCGGGGCATGTG GGAGCG TGCTTGCCCCGCGA      TGCTTCTAAATCATC  71 37
LOY45_RS20800 4527506 .. 4527534 +  -4.3  -2.62735   AGGCATCCTGATGCC        TGCAGTGGCGAGC CAG GCTCGCCCCGCCC        TGATCTCCACCCTAT  43 30
        glpK 4529091 .. 4529149 +   -17  -2.83504   AAACAAGCTGTAAGC TACAAGCTGCAAGCGTGTAGGCCACGA ATCATC TTGTGGCTTGCA-GCTTGCAGCTTGAG CTGTTTTCATGGCGC  87 48
LOY45_RS20810 4529957 .. 4529987 +   -14  -2.64669   GTGGTCTGAGCCGCC       GCAAGCTGCCATCG CAA CGATGGCAGCTCGA       ATGTTCGTTATTTTT  78 32
        glpD 4531867 .. 4531878 +  -2.2  -2.63715   ATCGAAATCAGGGCT                TGGC ACGA GTCA                 TGCTCTACACTCAGT  38 220
LOY45_RS20820 4532928 .. 4532942 +  -2.8  -3.72576   TCCTGATCCCCAGCT               AGTTAG TGT CTAACC               TTTCATCCGAGGGCG  53 35
LOY45_RS20825 NONE
LOY45_RS20830 NONE
LOY45_RS20835 4535166 .. 4535205 + -18.6  -3.34013   GCAACACTGAGGTCA  CAACGCTGCTTGTCCGGT GTAC GCCGGGCAGGCAGCGCTG   TTAGTTACCGGGCTA  95 31
LOY45_RS20840 NONE
LOY45_RS20845 NONE
LOY45_RS20850 4538795 .. 4538807 +  -5.5  -2.53759   ACGGTGCTGGTGAGT                GTCTG GGT CAGGC                TGCATTAAGGCTCTT  46 5
LOY45_RS20860 NONE
LOY45_RS20865 4545522 .. 4545554 + -17.8  -3.21276   ATGAGTTAATCCAGG      CGCCAAGGGAACAG GCAAG CTGCTCCCTTGGCG      TATTCTCACGCCAGC  90 37
        metR 4549065 .. 4549111 +  -4.8  -4.07885   CCGAGAAGCTCACGG CGATCTGGGTCAGGCCCAGGGC CAG GCTCTGCGCCAGCACCGAACCG TTTTCCGGCGAGATG  64 193
LOY45_RS20890 4554851 .. 4554873 +  -6.2  -3.53224   GGCTGGCGCTTTAAT           CCCCAACC GGGATAA GGTCGGGG           TTTGACCAGGCCCTG  56 415
LOY45_RS20900 4556565 .. 4556593 + -12.4  -2.87564   CTGCGACTCTGATCG        CTCGGGCACTGC GAACA GCATTGCCCGGG        TCTCTCCCGCCCTGA  66 61
LOY45_RS20920 4561051 .. 4561066 +  -6.1  -4.18934   CAATACAGGTGACCG              GCCTG CTCCTC CAGGC               TTTATTGCGGTAATA  66 270
LOY45_RS20935 4566930 .. 4566941 +  -3.6  -4.20531   GCGATTGAAAAATAC                TGCG TCTC CGCG                 TTTTAGCTGGCTCTG  64 187
LOY45_RS20945 NONE
LOY45_RS20950 4569068 .. 4569080 +  -3.3  -3.48276   CAGCAGATGCCTGAA                GCGCA GGC TGCCC                TTCTCTACACAGCAC  49 275
LOY45_RS20965 4572254 .. 4572264 +  -4.6   -5.1101   ATCCTCGAAACTCGG                 TGGC CTT GCCG                 TTTTTTCAATAATCA  81 302
LOY45_RS20970 NONE
LOY45_RS20975 4576115 .. 4576172 +  -9.8  -3.25479   AGCTGCTAGCTGCAA GCTTCAAGCTGCAAGCACCGCGCTCC CCACTT GCGGCTTGTAGCTTGAAGCTTGAAGC TTGAATCTTTCCTCC  68 46
         lon 4578772 .. 4578801 +  -5.7  -3.25072   AAGCCCGCTCCCACA       GACGAT-GCAGGCC CTT GCCCTGCGATCATC       TTCGGTTATGCTGCG  54 147
LOY45_RS20985 4579241 .. 4579271 +  -2.5  -3.65902   GTGAAGTAGGCCGCG      CTGGTCAGCGGG CCATGCAT CCTGCCG-CCAG       TTTGGCTAAAATGCC  48 32
        cmoA NONE
        cmoB 4581135 .. 4581156 +  -7.9  -3.65522   AGGTTTTTGCGCGTC           GGACTTGGC CACT GCCTGGTCC            TTCTTGCCGTGAATC  63 144
LOY45_RS21025 NONE
LOY45_RS21030 4591268 .. 4591279 +  -3.6  -4.12532   CACGCATAAATTCAA                GCTC CTCA GGGC                 TTTCTGTGTCGCGAA  60 525
        nadB 4608926 .. 4608941 +  -6.8  -3.19192   CATGCGTTGCAGCTC              CGGGTC TTCG GACTCG               TTGCGTTCCATGAAC  54 481
LOY45_RS21110 4610236 .. 4610268 +  -5.4  -2.53876   CGAAATCCAGCGCTG     AGCCTGCTCCCGCCC TCCC GGGCGGG-GCACTCC      TGAATTGCGGTAGAG  46 25
LOY45_RS21115 4611333 .. 4611358 +  -6.8  -3.29461   GCAGGATCACGTTGC         CGCCCTTGGGC GTATG GGCCA-GGGCG         TTGTCCACCAGGTTG  54 261
LOY45_RS21130 NONE
LOY45_RS21135 NONE
LOY45_RS21140 NONE
LOY45_RS21145 NONE
LOY45_RS21150 4618724 .. 4618743 + -12.2  -3.54146   ACTGAAGCAAAAAAA            GAGGAAGC CAGG GCTTCCTC             TGTTTCATTGCGCGC  78 36
LOY45_RS21175 4627623 .. 4627634 +  -5.8  -3.07816   GTGTAGATTTCAGTG                CGGT AGTA ACCG                 TTACCTCCGTAGGGG  49 329
LOY45_RS21185 NONE
LOY45_RS21190 4629633 .. 4629645 +  -4.7  -2.73797   CGAAGGTTAAACTGT                CGCGC CCT GCGCC                TGGCTTTGTATGCGT  44 31
LOY45_RS21195 4630391 .. 4630415 +  -8.6  -2.75382   ACCAATTGCCCGAAA         GGCACTTGCGG GTTG CC-CAGGTGCC          TGCTTGAATCCAATC  57 69
LOY45_RS21200 4631702 .. 4631713 +  -3.6  -2.87468   TGGTACAAAGTCAGC                CCTG AAAG CGGG                 TGTCGTATAATGGCA  43 176
LOY45_RS21205 4632201 .. 4632219 +  -3.1  -4.62302   GCAGCACCAGGCCAG            GCTCAGCA GGAT TGC-GGGC             TTTTTCCAGCTATTG  72 443
LOY45_RS21215 4634583 .. 4634605 +  -5.4  -3.03124   ACGCCGCCAGGCCTT           GCTGGCGCGC CCA GGGCATCAGC           TCTTCCGCCATGAAG  46 469
LOY45_RS21250 NONE
LOY45_RS21255 NONE
LOY45_RS21260 4644398 .. 4644411 +  -5.2  -4.20749   TGCGTAATCACTGCA               GGCC TTTTCT GGCC                TTTGTTGCCGTATTG  67 102
LOY45_RS21265 4647038 .. 4647078 +    -4  -3.05022   ACAAGATCATCCGTC CCGCCTGTGGCTCAATGAAG GCA CTTCTCTG--CCACAGGCGC TCTGTATGTCCAGCC  44 75
LOY45_RS21270 4648211 .. 4648223 +  -4.1   -4.0156   CTGACGCTTGACCGC                CAGGA TCA TCTTG                TTCTTGTTGGTGTGC  60 259
        bglX NONE
LOY45_RS21300 NONE
LOY45_RS21305 4657028 .. 4657057 +  -8.6  -3.62096   CGCCATAAGCGGATT       TTCGCCTACCCA CTCGTT TGGATAGGCGGA        TTTCCGCTCATCACA  66 55
LOY45_RS21310 4658526 .. 4658552 + -14.5  -5.72622   CATCGGCAGAAAAAA        GGGGGC-ATCCG CCAG CGGATTGCCCCC         TTTTTTGTTTATGGC 100 48
LOY45_RS21315 4659048 .. 4659065 + -14.1  -3.37533   GATGTGACGCAGTCA             GCCCGGC CTCG GCCGGGC              TTAGTCATTTTCAGC  83 46
LOY45_RS21320 4659903 .. 4659916 +  -3.7  -3.31792   CACCCAGGCCTTTGA               CGGCG ATGG CGGCG                TTATAACCGTCGTCG  49 176
LOY45_RS21335 4661710 .. 4661722 +  -9.1  -3.05816   AATCCACACCAGCCC                CGCCT GCA AGGCG                TTGGCTACCCGCTCG  60 271
LOY45_RS21350 4665641 .. 4665662 +  -9.3  -3.67976   TAACCGACAGTGAAG           CGCTGCCGC GAGT GCGCCGGCG            TTTCCACTTCATCGA  68 38
LOY45_RS21365 4668176 .. 4668188 +  -3.3  -3.02324   AAACCGGGCATACCC                GGCCA GGC TGACC                TATGCTTTGAATAGC  42 39
LOY45_RS21370 4668524 .. 4668551 +  -7.6  -3.17075   GGCCAGTTGCTTGAT        GCTCAGGCTGGT GTAG ACCAGCTCGCGC         TTGGCTTCGAGCAAC  55 141
        pobA 4670673 .. 4670698 +  -6.7  -3.05384   ACTGGTCGGCACCTG         CTCCCGCAGCT GATC GGCTGCGGGCC          TTACCTGCCCCAGAG  54 56
LOY45_RS21385 4672394 .. 4672412 +  -8.1  -3.09933   TTCCGGGTCCACGTC            G-GCGGGC AGTT GCCCGCGC             TTGACTGCATTGCCC  55 241
LOY45_RS21395 NONE
        ttgB NONE
LOY45_RS21405 4678899 .. 4678917 + -11.7  -5.26316   TTGCGTTGTGAAAGA             GCCCACC CTTGC GGTGGGC             TTTTTTATGCAATCG 100 45
LOY45_RS21410 4680699 .. 4680713 +  -7.8  -3.54459   GCACGGTGTTCTCCA               GCCGTG TGA CATGGC               TTTGCAGCAGGTTGA  60 313
LOY45_RS21420 4682875 .. 4682889 +    -7  -3.33815   GGTGTTCAGCGGCAG               CTCGGC CAG GCCGCG               TTGCTTGAGGGCGCT  55 390
LOY45_RS21430 NONE
LOY45_RS21435 NONE
LOY45_RS21440 4687870 .. 4687884 +    -7  -2.73875   ATCTCGCCATAGCCC               AGGCGC AAG GCGCCC               TCCTGTTGCAGCGAC  48 76
LOY45_RS21450 4689339 .. 4689354 +  -2.4   -3.6284   CGCCATTGTTGGCCG              CCGCGC GCAG GTGCAG               TTTCAGCTCCTCGTT  50 271
LOY45_RS21495 4698353 .. 4698368 +  -4.6  -4.58395   GGGCGCTTTTGCCGG              CCCGCA ATGC TGCGGA               TTTTTGCGCGGTCCA  74 87
LOY45_RS21505 4700125 .. 4700142 + -14.1  -5.28778   ACCCCGCAGTAAAAA             GGCGCCC CGAG GGGCGCC              TTTTTTATGCCTGAT 100 44
LOY45_RS21515 4703719 .. 4703765 +  -9.1  -3.41878   AGCGGCAAGCTTGAA GCTGCAAGAAGAA-ACAGAGC CGAGTGC GCT-TGTCTTTTTCTTGCAGC TTGTAGCTTGCAGCC  66 53
LOY45_RS21520 NONE
LOY45_RS21525 4705765 .. 4705775 +  -4.6  -2.65264   CCAGCAGGCACGGCC                 GGTG AAC CGCC                 TGCTCTGGCTGCTCC  43 21
LOY45_RS21530 4706796 .. 4706822 + -13.7  -3.12351   CCGCTCCCAGAGCTC         GGCGGCACCGG GAAAA TCGGTGCCGTC         TTCGCTGTCCAGCGC  76 51
LOY45_RS21545 4708523 .. 4708539 + -13.7  -5.79595   ACTCGCTAAAAAAAA              CGCCAGC TTA GCTGGCG              TTTTTTATTTTCAAC 100 65
         pyk 4712629 .. 4712652 +   -16  -5.75342   ACACTGCTGAACAAA          GCCCTGCAGC CTGT GCTGCGGGGC           TTTTTTTTGGCCGGA 100 48
LOY45_RS21580 4716579 .. 4716605 + -20.2     -6.13   TGCTGATAGAAAAAA         GCGGCAGGGGGA TTA TTCCCCTGCCGC         TTTTTTTTTGCCTGT 100 53
LOY45_RS21615 4722357 .. 4722376 +  -3.4  -2.78463   GTGCCCGCGCTATGC            CCGTCACT TCAA GGCGGCGG             TCTGATGCAGCGCCT  41 1
LOY45_RS21620 4723637 .. 4723654 +  -2.5  -3.54424   CAGCGGCAAGGGGAA             GCGCCCC TGCA GCGGCCC              TTTGACGAAATCGCC  47 496
LOY45_RS21630 NONE
LOY45_RS21635 NONE
LOY45_RS21640 4726540 .. 4726557 + -14.1  -3.34715   GGCCTTGCCGGCGAT             GGGCCGC AACA GCGGCCC              TGTTTAGCGCCGATC  83 122
LOY45_RS21660 4730237 .. 4730252 + -10.4  -2.78715   TTGTTGCGTGGTTAA              GCACCG GGCC CGGTGC               TATGATCCAGCCCTT  66 93
LOY45_RS21665 4731003 .. 4731021 + -11.7  -5.24129   TCGAGCGACCGAAAA             GCCCACC CTAGC GGTGGGC             TTTTTTATGGGCGCC 100 73
LOY45_RS21670 4733426 .. 4733440 +  -2.8  -3.70742   CCCCTTTACACAAAA               TGCAAA TCT TTCGCA               TTATGTTGCAGTTTT  53 98
LOY45_RS21675 4734861 .. 4734878 + -12.7    -5.252   AGCGGCGGTAAAAAA             GGCGACC TTCG GGTCGCC              TTTTTTATGCGCATC 100 44
LOY45_RS21680 NONE
LOY45_RS21685 NONE
LOY45_RS21690 NONE
LOY45_RS21695 NONE
LOY45_RS21700 4743403 .. 4743439 +  -2.7  -3.87815   ATTGTTTAAGGTCGT    TGGCGGCGGCGCGCTGG CAG CTGATACGCCGGCGGCA    TTTCTCCAGGTCGAG  55 424
LOY45_RS21730 4747842 .. 4747860 + -13.1  -4.82901   TTCAGGCAAAAAAAA             GCCCCGC ACTAG GCGGGGC             TTTTTATCGAACGGG 100 144
LOY45_RS21760 NONE
LOY45_RS21765 4754645 .. 4754691 +  -9.5  -3.14344   AGAACGCCCCTGAAC CGCGCT-GAGGCTATTACCGGAG CTA CTCCGG-GATAGCCTCTGGCAAG TTGGTGGAAGCGCTC  66 28
LOY45_RS21785 4758558 .. 4758578 +  -2.4  -3.59979   GATTGCCCAGCGACT            GAGCACGG CGCTA CCCTGCCC            TTTCACCTACAGACC  48 24
LOY45_RS21790 NONE
LOY45_RS21795 4761546 .. 4761574 +  -5.2  -3.75437   TGGCAGGACGCCGCC       AGCCAGC-GTTCC TTGG GGAACGGCCGGCC        TTTGCTGGCGTACTT  58 385
LOY45_RS21820 4768152 .. 4768177 +  -5.3  -4.09685   CGTCTTCGTTGAGCA         CGCCGTCCTTG TCGA CCACGATGGCG          TTTTCCACACTGCCA  64 411
LOY45_RS21915 NONE
LOY45_RS21920 NONE
LOY45_RS21925 NONE
LOY45_RS21930 NONE
LOY45_RS21935 4791304 .. 4791323 + -13.6   -5.5604   GACAGACACAAAAAA            GGCGATCC CTGC GGATCGCC             TTTTTTGTTACTTGA 100 50
LOY45_RS21975 NONE
LOY45_RS21980 4798655 .. 4798688 + -11.1  -2.73542   CGGCAAGCAAGAGCA     GGATCAAGAGCAGCGC GCG GT-CGGCTCTTGATCC     TGCTTGCAGCTTGAA  69 75
LOY45_RS22000 4802493 .. 4802509 + -13.7    -5.252   CTGAGCAAAATAAAA              GGCCCCT GTG AGGGGCC              TTTTTTATAAGCGTC 100 37
LOY45_RS22015 4807236 .. 4807251 + -10.4  -3.92324   GCACGCAACAAAAAA              CCCCAC CGGG GTGGGG               TTTCCTGTTCAGCGC  79 87
LOY45_RS22040 4813116 .. 4813128 +  -4.7  -2.80816   CGGTTCGCCACGGTG                CGGGC AAA GCCCA                TCTCGTGGGTCACGC  45 269
LOY45_RS22065 NONE
        rhlB 4819693 .. 4819751 + -37.8  -4.56775   TGATTGCGTTGAGCC -TATCGCGGGGCACGCCCGCTCCTACC CCATCC GGTAGGAGCGGGCGTGCCCCGCGATGC TTTTTACACCGCCCT 100 38
LOY45_RS22075 NONE
LOY45_RS22080 NONE
LOY45_RS22085 4822612 .. 4822631 +  -9.3  -3.05384   CCTGAAGGAACTCAA            GGCCTGA CTACCT TCAGGCC             TTGAGTGAGGCGGCG  63 19
        yaaA 4828746 .. 4828759 +  -2.3  -5.24531   CCCGCTCCCACAGGT               CCAGT GGAC ACAGG                TTTTTTGTGGGAACT  79 60
LOY45_RS22125 4830819 .. 4830866 +  -3.9  -3.76952   AGGTATCTGCTGGTA ACCCGCAG--GCTGGGCGGGGCC TTCC GGCCCCGCCCAGCATCAACGCCC TTTCCATTCGATACG  55 25
        alg8 4832375 .. 4832385 +  -2.4  -3.17075   TCATGGTCGTGTGAG                 CCGG AAC CCGA                 TTGGATTAAACAGGA  42 27
LOY45_RS22135 NONE
        algK NONE
LOY45_RS22145 NONE
        algG NONE
LOY45_RS22155 NONE
LOY45_RS22160 4840855 .. 4840878 +  -6.6  -3.55548   AGATTTGATCTGGTT          TCTCCCGGGA GGTT TCACGGGGGG           TTTGGGGGGCTGTTG  60 152
LOY45_RS22165 NONE
LOY45_RS22170 NONE
LOY45_RS22175 NONE
LOY45_RS22180 4845712 .. 4845768 + -36.1  -4.87291   CGCGCAGTAAAACCC CAATCGCGGGGCAAGCCCGCTCCTACA CAT TGTGGGAGCGGGCTTGCCCCGCGATGC TTTTTGGTTAGGATG 100 31
LOY45_RS22185 4846254 .. 4846264 +  -6.8  -3.54424   TACCGCGCCGAGCAC                 CTGC AAG GCAG                 TTTCGCCGACTGAGC  60 2
LOY45_RS22190 4846747 .. 4846759 +  -5.5  -3.15579   TTAAGGACAGCAGCT                CATGC CCA GCGTG                TTGATCACCGGTTGC  50 37
LOY45_RS22195 4847809 .. 4847852 +  -2.3  -3.53012   TTCGGAGCGGGTCGG CCC-GGGCAGCA-CGGCGTTG ACCG TGACGCCGGTGCCGGCGAGGG TTTCCGCCAGGCCGC  47 262
LOY45_RS22225 4854387 .. 4854406 +  -3.6  -3.72576   GGCCTGGTCACCCAC            CCGAACATG CGG CA-GTTTGG            TTTCCTCGAAGAAGC  54 294
LOY45_RS22250 4860048 .. 4860101 +   -14  -2.73124   CCTGAAATCTTGCTG CACAGCG-GCGGTGGAGAATG-ATAG CGTG CTACCCATTCTCCACCGCCCGCAGAG ATTTCGCCGATGAAA  79 36
LOY45_RS22255 4861184 .. 4861194 +  -2.4  -3.57144   CAGCACACCGGTACC                 GCCC AGC GCGC                 TTTGCAGATAGCGCC  50 127
LOY45_RS22265 4862607 .. 4862631 +  -4.2  -4.63932   CATGCCCCAGGCATT         GG-TGGTCAGC GGCC GCAGGCCAGCC          TTTTGTTGCAGGCTG  75 473
LOY45_RS22275 4864358 .. 4864373 +  -6.8  -4.07618   AACGGGGTGAAATAA              CAGCGG AGCT TCGCTG               TTTGGTTATTGGGGA  68 222
LOY45_RS22280 NONE
        bamE 4867562 .. 4867606 +   -10   -2.5547   GCGCTCGCTCAACTG GCCGGTCAGGTCCAGTTCGACG CCC CG-CGAGC-GTACCTCGCCGGC GTTGCTGTAGAGGGT  58 503
LOY45_RS22325 NONE
LOY45_RS22330 4877150 .. 4877163 +  -3.1  -3.69354   CGCGTGACAGAGAAG               GCAGA ACCC TTTGC                TTTGACCTTCTCAAG  50 77
LOY45_RS22335 4879545 .. 4879562 + -14.1   -4.7254   CCAGCGCATGCAAAA             GCCCGGC CTGT GCCGGGC              TTTTTGCTACAAGAT 100 42
LOY45_RS22340 4880138 .. 4880156 +   -16  -5.75945   GCAGACGGTAAAAAG             GCGAGCCC AGG GGGCTCGC             TTTTTTTTCCGAAGT 100 49
        norR NONE
LOY45_RS22360 4884827 .. 4884847 + -14.1  -2.62091   AGCCTTGCGCTTGAA            TGTGCCTGA AGC TCAGGCACA            ATTGTGCGTACGTCT  78 54
LOY45_RS22365 NONE
LOY45_RS22370 4886365 .. 4886391 + -11.4  -3.05715   GACCACGGCAAAACC         GCGGCCCTGATC ACC GGCCCGGGCCGC         TTCGATGGCGGCATT  66 455
LOY45_RS22380 NONE
LOY45_RS22385 NONE
LOY45_RS22390 NONE
LOY45_RS22395 4894215 .. 4894238 +  -3.2  -3.86194   TTACCTTGGACGCAA          CAGTG-CTTAT CCC AAAAGTCACTG          TTTCTCCCACCCATT  53 149
LOY45_RS22400 4894603 .. 4894621 + -11.7  -5.92337   CGGTTGTCTTTCAAA             GCCGCTG CCGAT CAGCGGC             TTTTTTTTCGTGTGT 100 103
LOY45_RS22405 4896206 .. 4896222 +  -2.1  -3.54307   TAGAATACGGCCGCC              GCGCAGT AAT ACCGCAC              TTTCCAGACGGTCTT  48 168
LOY45_RS22410 4898131 .. 4898142 +  -5.8  -4.10855   GGGGATTCTTCACAT                CCTC GGCA GAGG                 TTTTGAAACCCTTTT  66 405
LOY45_RS22420 4898895 .. 4898905 +  -8.2  -2.70932   CACTGGCCGGGATCA                 CCCG CAG CGGG                 TCCTTGGCGGCAAAC  53 262
         cra NONE
LOY45_RS22445 4907760 .. 4907774 +  -5.6  -3.72576   CATTCAGCGACAGCG               GCGCCA TGC TGGCGA               TTTCGTGCAACAGCA  60 384
LOY45_RS22455 4909315 .. 4909325 +  -6.8  -3.39327   GCCCTTCGTGATAGG                 CCAG GTA CTGG                 TTGTAGGTATCCCAC  55 180
LOY45_RS22465 4910466 .. 4910504 +  -8.1  -3.56643   TGAGGCTTTCTTCAG  GCGAGC-GCCAGTGTTGC TTAG GCAAGGCTGGCTGCCTGC   TTTGGGAGGTATGGA  66 38
LOY45_RS22470 4910838 .. 4910850 +  -3.3  -3.09015   ATGGTCTGCTAACCT                GCTGC GCC GTGGC                TTGCGTAAATCTGAA  43 42
LOY45_RS22475 4911630 .. 4911660 +  -7.5  -4.09321   GGCTTTTGCAACTGA       TGGGAGCTTGGCG GAGTA CGACACGCTTCCA       TTGTTTGCTTGCCTG  71 402
LOY45_RS22485 NONE
LOY45_RS22490 NONE
LOY45_RS22495 NONE
LOY45_RS22500 NONE
LOY45_RS22505 4918989 .. 4919004 +  -2.5  -3.40597   GCAATATGCTTCCTT              TGCCA AGCCCA TGGCG               TCTTTCGCTGCCAAC  45 170
LOY45_RS22535 NONE
LOY45_RS22540 NONE
        coaE NONE
        yacG NONE
LOY45_RS22570 4929473 .. 4929492 +    -5  -3.54424   GGCGACCTTCGAGCT            ACTACAGT GAAC ACTGTAGC             TTTCCCACAGTCACA  56 136
LOY45_RS22575 NONE
LOY45_RS22580 4931443 .. 4931459 +  -7.9  -3.92178   CCCGCCATCAAGGTA              CAGGCCC TTG GCGCCTG              TTTCATTCAGGTGCT  67 384
LOY45_RS22625 4938173 .. 4938190 + -12.7   -5.1675   CGTGTAAAAGATAAA             GGGAGGC CAAG GCCTCCC              TTTTTTCATGCCTGA 100 46
LOY45_RS22630 4938867 .. 4938878 +  -7.2  -3.27475   GGCTTTCCAGCGCCT                CCCC GGTC GGGG                 TCTTGTCGTAACCGG  54 416
LOY45_RS22660 4942597 .. 4942641 +  -5.5   -2.5511   GTCGTTGACCTGCAG GCTGGCAACATCGTCCTCGTC TTC GACCAGGTAGATGGCGCCACC ATTGCTGGTGTCGTA  45 503
        rpsT 4949994 .. 4950009 + -10.4  -5.49234   ATGCTTGTTGAAAAA              CCGACC CTAG GGTCGG               TTTTTTATTGCCTGT 100 46
LOY45_RS22785 4971152 .. 4971174 +  -7.8  -2.60075   TGAAGCCTCCCGGGA           CGTGAAGT AGTCGAC ACTTCACG           CTTGATTCCGGGCGC  53 38
LOY45_RS22790 4971604 .. 4971631 + -11.3  -2.75963   CAGCAACGAGTGAAA       C-GCCCGCC-GGC TGTG GCCTGGCGGGCAG        CTTTCGGCTACCCGT  69 41
LOY45_RS22795 4972171 .. 4972191 + -16.9  -5.47218   CTAATCACGGTTATT            GACCCGGCA CTT TGCCGGGTC            TTTTTTTGCCTGGGG 100 156
LOY45_RS22820 4976236 .. 4976248 +  -5.5  -3.89346   CTGCCGCGAAGACAG                CCAGG GCA TCTGG                TTTATCGACTGAGCA  62 1
        dksA 4978842 .. 4978862 + -16.1  -4.15066   CTGACCTGACCAGAA            CGGGGCGCT CAA GGCGCCCCG            TTTCATTTATGGCTA 100 37
      gluQRS NONE
LOY45_RS22845 NONE
LOY45_RS22850 NONE
LOY45_RS22855 4984656 .. 4984682 + -10.9  -5.76949   AAGTCGTAACAAAAA         CCGGGGCTT AAGGTAACG AAGCCCCGG         TTTTTTTTCGCCCTC 100 113
LOY45_RS22860 4986657 .. 4986680 +  -2.2  -2.53876   GCCGACGGCGCAGCA          GGCGAGTAAC ACAT GATCCGCGCC           TACATTGGCCTGGGC  38 17
        folK 4987283 .. 4987297 +  -7.8  -2.60496   AAAAAGGCGTATATA               GGCCTG GAA CAGGTC               GTATTTCAAACACCA  53 163
        panB NONE
        panC 4989110 .. 4989129 +    -2  -4.64766   TGCCTATAATTGGCA            TCAGCCTG CAAA CAGGATGC             TTTTTCCAGTGTCCA  65 83
         pgi 4990844 .. 4990893 + -12.2  -2.78384   TCACCGCGGTTGATC GCCT-G-CGCTGCCCCTGGCCG AACGAACA CGGCCAGGGGCAGCGGCTACAC TGTCCTGACAAAAAC  71 28
         acs 4992869 .. 4992879 +  -4.6  -3.68619   GCCTGAACACTTAAG                 CGGC AGC GCTG                 TTTGGCTGCCTTGCA  54 27
LOY45_RS22890 NONE
LOY45_RS22895 4995074 .. 4995100 + -15.8  -2.54193   GAACGCTGATCACCG         CGGGAGGGGCTG CAA CGGCCCCTCCCC         TGGCTTGAACTGATA  81 32
LOY45_RS22900 NONE
LOY45_RS22905 4999246 .. 4999268 + -16.3  -3.64822   CGCCCCCAAAAAGAA           GCCCCGGCA ACCAG TGCCGGGGC           TTTGAGTGACCAAGT  95 80
        yhbY 5015695 .. 5015740 + -15.3  -3.05384   CCGTTACAAGTGATG TTCGCCCCGGTCAGTGGCGCGC CTT GCGCGCC-CTGCCCGGCACGGG TTGCATGACCAGCAG  83 28
        recN 5028069 .. 5028101 + -12.8  -3.29829   ACAATCAGGCAGAAA     GCAC-GAAGGCGACC CCAG GGTCGCCTTCAGTAC      TTATGCAGCAATGTA  78 59
LOY45_RS23045 5029173 .. 5029190 + -12.7   -5.4833   AGCGCACACAAAAAA             GCCCGGA CCAG TCCGGGC              TTTTTTATTGCCTGC 100 47
        smpB 5030619 .. 5030662 + -38.4  -3.14211   CCTGAAGCGCCTTTA TCGCGGGGCAAGCCCGCTCC TACA GGAGCGGGCTTGCCCCGCGA TTGCTAACGCCCGCT 100 47
LOY45_RS23070 5033355 .. 5033398 + -11.4  -3.53444   TGCTGGTTCACTAAA GTGTCAGGGGCCGGGCGCGT TGTG GCGCGCCCGGCAGCCGCCCC TTTAACCAACGCTGC  75 27
        lldD NONE
LOY45_RS23080 5037489 .. 5037508 +  -4.8  -3.53012   CAGTCCATCCATTTA            GGCCCCTG TTTC CCGAGGCC             TTTCCAGCCAAGGAG  52 58
LOY45_RS23085 5037809 .. 5037861 +  -7.7  -2.79831   AGCAACGGCCAATAA C-CCGTCTGCCGGGCGATGTTAGGC CAGCA GTC-GACGTCGCCCGACCGATGGCG TATACTCGACCTTGA  54 26
        ssrA 5038323 .. 5038347 + -12.2   -5.4833   ACGCAAAACGAAAAA         GGCATCTGGCG CTTG CGCC-GATGCC          TTTTTTGTTGCCTGA 100 44
LOY45_RS23095 5039338 .. 5039351 +  -5.3  -2.70774   GGACATATGAAGAAC               CAATG CGCC CATTG                ATTATCCTTACCCTG  46 57
LOY45_RS23100 5040159 .. 5040169 +  -2.4  -3.45023   TCGGGCAGTCGCTCA                 GGCC TTC GACC                 TTCTGGTACTCCTGG  47 434
LOY45_RS23110 5044167 .. 5044182 +  -4.6  -3.28712   GACACCGCGGTTGGC              GGTGAG CTGG CGCACC               TTCTCGCCCCAGGCC  49 371
LOY45_RS23120 NONE
LOY45_RS23125 NONE
LOY45_RS23130 5049079 .. 5049093 +    -7   -3.1372   AGCCCACCTGTGGGA               GCCGGC CTT GCCAGC               TATTGGTCGAGCATC  54 95
LOY45_RS23150 5052315 .. 5052333 +  -3.1  -3.34398   CTGGCCTTGAGGCTG             CTGTTCA TTTTT TGATCAG             TGTTTCCGGGCGGCC  46 96
LOY45_RS23155 5053778 .. 5053800 + -10.4  -3.56643   CTTGCGCACCGGCTT           GGCCTGCGGC GCC GCCGCTGGCG           TTTCAGCGCTGTCCA  71 174
LOY45_RS23175 5057635 .. 5057649 +  -5.6  -3.01712   CCTAGCGATAGTTGT               TCAGCG CTT CGCCGA               TCTTCGCCGCGGGGA  48 36
LOY45_RS23195 NONE
LOY45_RS23200 5061665 .. 5061716 +  -7.8   -2.5547   CAGAAGTTGGCCAGA TCCTGGGTCACCTGC-ACCGGCCGC CGC GCGGGCGACAGCAGGTGCAACAGGA CTTGCTGTCGGCCCT  50 156
LOY45_RS23210 5064582 .. 5064598 +  -6.6  -3.34398   TGGCCATGTACGGCC              TCAAGC CCGCT GCTTGA              TCTTTGACAGGAAGC  56 9
LOY45_RS23215 5065718 .. 5065728 +  -3.2  -3.41738   GAGTGTAAGAGGGTT                 CAGC CAT GTTG                 TCTTCTGTTGGAATC  48 247
LOY45_RS23220 5066839 .. 5066853 + -11.4  -2.78384   CGTAGCTGGCCGCCG               CCGGGT CAA ACCCGG               TCTGCTGCACCGCCC  62 212
LOY45_RS23230 NONE
LOY45_RS23235 5069116 .. 5069154 +  -8.2  -4.15222   CTTGAGGGTCGCGCG  CCCTTCGCCGTCGCTGA ACTGGG TCAGC-ACGTCAAAGGG   TTTGTTGAACAGGAT  72 502
LOY45_RS23260 5075574 .. 5075584 +  -2.4  -3.14124   GTTCGTGCCGCGCCG                 CCTG CCC CTGG                 ATTTCTGTTCCTGAT  42 1
        thiE NONE
        hemL 5077653 .. 5077663 +  -3.2   -3.3452   TAAAGACTTTGTAAG                 GTAG GCG CTGC                 TTATCCCATAATGTG  46 136
LOY45_RS23275 5078514 .. 5078534 +  -2.6  -3.61654   TTCAAGGAAGCCCCA            CAGATC GCTTTGATA GATCTG            TTTGGCGTACATCTC  50 266
        miaB 5080072 .. 5080105 +  -5.8  -3.32769   CTGGCCCATTGACCT     GTCCTGCCGGGCCT TGTTAC AGGCCCGGCGACCC      TTGATCGTTTCAGCG  54 29
LOY45_RS23290 NONE
        ybeY NONE
LOY45_RS23300 NONE
         lnt 5084296 .. 5084309 +  -5.9  -4.10161   GCTGCAACAGCTCGG               CGCTC ATTT GGGCG                TTTTCCCAGGTGGTG  66 267
        leuS NONE
        lptE NONE
        holA 5089868 .. 5089921 + -33.5  -2.52676   CTGCTTTGCAGCCCA TCGCTGGCAAGCCAGCTCCCACG ACCGTCCC TGTGGGAGCTGGCTTGCCAGCGA TGGCTTCAACGCCTA 100 50
        arfA NONE
LOY45_RS23340 5091537 .. 5091562 + -19.1  -3.53224   TAATCGCGGGGCAAG         CCCGCTCCTAC ACAG GTAGGAGCGGG          TTTGCCCCGCGGATG 100 45
LOY45_RS23410 NONE
LOY45_RS23415 5106183 .. 5106203 + -12.6  -3.86015   CAGCCGATCGAGCAG            CGCCTGGA TAGCC TCCAGGCG            TTTGTGCGGCGAATC  81 66
LOY45_RS23435 5108441 .. 5108481 + -10.4   -2.5805   CTTCGTCTGAGCCAG  GCAATGGGTGAAACCGTC CTGGC GACTGTTTCACCCGCCGC  ATTCTGCGGCATACT  64 31
LOY45_RS23440 NONE
LOY45_RS23445 5110965 .. 5110979 +  -7.1  -2.61106   TCGCTGGCAAGGCCA               GCTCC CACAA GGAGC               TACATTCTCCCTGTG  50 65
LOY45_RS23470 5117063 .. 5117105 + -12.7  -3.14211   CTGGGCTTCTTCTAA ACGGGCAACAGGGCGGTCCCG ACC CGGGGCCGCTCTG--GCTCGC TTCCTGCAAGACCAT  75 26
         eat 5118635 .. 5118657 + -16.3  -3.34501   GATCAACGCCACCTA           CGCCGCAGG CCAGC CCTGCGGCG           TTCTGGAGATTCTGT  90 39
LOY45_RS23480 NONE
        eutC 5120980 .. 5120992 +  -3.3  -2.83271   GCCGTAAACTCCCAT                GGACT CTG AGGCC                TGCTTATGCGAATCA  41 102
LOY45_RS23490 5121461 .. 5121494 +  -7.4  -2.53263   ACTCGGACTGATCCG     AGCGCAACGGCAGGC ACCAC GCCTGCCGTT-CACA     TCCATTCGACATCCG  53 30
LOY45_RS23495 5122315 .. 5122327 +  -2.7  -2.80816   GAAGCCAAGGTTCAC                TAAGC CCG GTTTA                TGTGGTCGCTGAGCG  41 23
LOY45_RS23500 NONE
         ppa 5123773 .. 5123802 + -20.9  -3.53012   CTAAGCAACCCTCAA       CAAAAAGCCCCGC AAAT GCGGGGCTTTTTG        TTTCAGGGCAAGAAC 100 37
LOY45_RS23520 5125724 .. 5125740 + -10.8   -4.7497   AGCCCGTCCCCGGAA              GCCGGC CACAA GCCGGC              TTTTTAATGCCTGCG  95 225
LOY45_RS23525 5126923 .. 5126936 +  -3.8  -3.28712   CGGCGTTCAACTGCA               CCAG AGAAAA CTGG                TTATCCAGCAGCAAA  48 364
LOY45_RS23550 NONE
LOY45_RS23555 5132710 .. 5132763 + -13.4  -3.67517   GGCATGCCAGTAGAA GGCGTT-GCT-GA-TGGCCTTGAGTTC GGC GAACTCATGGCCAGTCCAGCCGGCGCC TTTGCGGTATTGCTC  81 108
LOY45_RS23565 5134634 .. 5134647 +  -4.5  -3.62522   CCCCCTTGGGAAACA               TCGCT CTGG GGCGA                TTGTTGACCCAGTTG  53 161
        rtcR 5140983 .. 5141002 +  -5.6  -3.02263   CTCAAGGGTTGAACA            GGGTGCTA GAAT TCGCGCCC             TCTTCGGCCGCATCT  48 29
LOY45_RS23595 5142360 .. 5142380 +  -7.6  -4.64676   GTCAGGTCAGGGCCA           T-CGTGCGC CCTG GCGCACGCA            TTTTGTTCGCCCTGA  79 247
        ribB 5143258 .. 5143279 +  -2.1  -5.26316   GCGCCGCAAGCCAAC           CCGGAGTCG TCCC CGCCTCTGC            TTTTTTCTGCCCTAC  79 205
LOY45_RS23620 NONE
        ispA 5148405 .. 5148460 + -39.3  -3.06796   TAAGCGCAAACCGCA TCGCGGGGCAAGCCCGCTCCCACAG CGATCA CTGTAGGAGCGGGCTTGCCCCGCGA TTAGCTCAAATGGGC 100 38
         dxs 5150470 .. 5150507 + -14.1  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAAGTACAGC GCAT GCAGAACCTGTGGGAGC    TGGCTTGCCAGCGAT  78 64
LOY45_RS23635 5152711 .. 5152736 +  -3.1  -2.75074   CCCAGACCTGATAGA         ACACCGACAGC GGGC GCTCTCGGCGG          TACTGTTGGCGTAAC  40 344
LOY45_RS23700 NONE
LOY45_RS23705 NONE
        trxA 5163264 .. 5163279 +    -6  -2.76261   CACCCAGTGATAAAC              CGGCGC ATCC GCCCCG               CTTTCCACCTTCACC  49 113
LOY45_RS23720 5164318 .. 5164337 + -16.4   -3.6053   CCTTTTGCAGCGAAA            CGCCCGGG GTAA CCCGGGCG             TTCATTTATGAGCCA  95 45
LOY45_RS23725 NONE
LOY45_RS23730 NONE
LOY45_RS23735 5166860 .. 5166870 +  -4.6  -3.65084   CTAGAATAAATGGCC                 GCCT GCA GGGC                 TTTGACGATTTCATT  54 32
LOY45_RS23740 5167663 .. 5167721 +   -37  -2.72144   GCGTCGTTTAAACAC AAATCGCGGGGCAAGCCCGCTCCTACAG CAC TTGTAGGAGCGGGCTTGCCCCGCGATGC ATTTCAGCGCCCTAA 100 41
LOY45_RS23755 NONE
LOY45_RS23760 NONE
LOY45_RS23765 5172799 .. 5172815 +  -7.3  -3.21099   ATGGTCTGGCTCATC              TCGTTGA CGG TCAGCGA              TTCGTAGTCGAGCAA  57 294
LOY45_RS23775 5175002 .. 5175025 +  -5.1  -3.31946   AAAAGCCGCCCCGTT          CGTGGGCGG CTTCCC CCTCCCCCG           CTTTTCTCTCACCTG  52 54
LOY45_RS23780 5176161 .. 5176184 +  -9.5  -3.28924   CCTTGTACGGATTAC          TGCCCGGGC GATTGG GCCAGGGCA           TTGTCGGCGCGGATC  68 139
LOY45_RS23820 5192086 .. 5192115 + -15.1  -3.67622   GCAAGCGTGAAAGGA       TGCGAGGGTGG CGTGACAA CCACCCTCGCA        TTGCTTTTGAAACTA  90 47
        uvrA 5203120 .. 5203137 + -14.1  -5.52384   CCCAGATAACAAAAA             GCCCCGC ACTG GCGGGGC              TTTTTTTGATCGGGA 100 123
LOY45_RS24140 NONE
LOY45_RS24145 5249545 .. 5249564 + -16.4  -3.62096   CCGCAGATAGCAAAA            CGCCGCGC ATCG GCGCGGCG             TTTGCGGTACTGCCC  95 42
        hemJ 5251681 .. 5251691 +  -3.2  -3.32844   TGGTAATTCTGGTGG                 TGGT CAA ACCG                 TTCTAACCTAAGCCC  46 9
LOY45_RS24165 NONE
LOY45_RS24170 5253143 .. 5253158 +  -2.4  -2.91264   TCGCAGTGGTTTTGA              CCGTGT TCAG GCCCGG               TATCTGAATCACACC  41 3
LOY45_RS24175 NONE
LOY45_RS24180 NONE
        coq7 NONE
LOY45_RS24190 NONE
LOY45_RS24195 5256624 .. 5256645 + -17.3  -3.15544   CTGAGCGTGGGGCAA           GCCCGCTCC TACA GGAGCGGGC            TTGCTGACCATCAAC  89 42
         crp 5258287 .. 5258300 +  -5.9  -4.03413   CAACGGCAGGCACAG               GCGCT CGTA GGCGC                TTTCTATGCGGCCGT  64 397
LOY45_RS24230 5263754 .. 5263775 +  -5.1  -2.94144   CCGTAGACCCCGCGC           TTGACCGGC TCCA GCTCGTCAA            TGATTTCCATGGCGC  46 297
LOY45_RS24280 5275688 .. 5275703 +    -6  -3.37464   ATAGCCCAGGATACC              GTCGGC CAGC GCCGCC               TTCTGCGGTTCGTAG  53 241
LOY45_RS24300 NONE
        surA NONE
        pdxA NONE
        rsmA 5284035 .. 5284047 +  -4.7  -3.06696   CTAGACTGACGCCAT                CGCCG TAT CCGCG                TCTGTTGCCAAGGCC  47 96
        apaG NONE
LOY45_RS24325 NONE
        glpE 5285875 .. 5285887 +  -5.5  -3.05596   GGGGGTATACAGCAA                TTGGC AGT GCCGA                TTGCATGCCAGCATC  50 232
LOY45_RS24335 5287903 .. 5287928 +  -6.2  -2.70932   CTGTCAGCTGCAAGC         CGCGCACGTAT GTCGA ATGCGTGC-CG         TGCTTGCGGGGACAG  48 56
LOY45_RS24340 NONE
LOY45_RS24345 5290844 .. 5290887 + -15.5  -3.35996   GCACCTCTAGCACGC CCTCCGTTGCTGCCAGACAGG TTAT CCTGT--GGCATCAACGGAGG TTCTACATGCAGATC  87 31
LOY45_RS24350 5292153 .. 5292191 + -14.6  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGGCCTG CCTACAC CGGACCTTGTGGGAGC   TGGCTTGCCAGCGAT  78 55
        plsY 5294066 .. 5294114 + -13.2  -4.08216   CAACGAGTTTGTTCG CCGTCGTCTCCAGCACTCTGGCA GCGC TGCCAG-GTGTTGAGGGCGAAGG TTTTCAAACCACTGA  89 383
        rpsU 5295200 .. 5295234 +   -10  -2.86164   GTCCGTCGCAAGCTT    CTGCC-TC-GCCCGGC CCAAA GCCGGGCTGCCGGCAG    TCGTTGCTTGATCCT  63 48
        dnaG 5297464 .. 5297474 +  -3.2  -3.43246   GTGAGGTCCTAGCTC                 GGGT ATA ATCC                 TTGGCTTGTTTTTTG  48 37
        rpoD 5299369 .. 5299398 + -16.5  -4.07568   TCCTCGACGAGTGAT       GACAAACCCCGGC CCAG GCCGGGGTTTTTC        TTTTCCGGCGAACGG 100 27
LOY45_RS24390 NONE
LOY45_RS24395 5303339 .. 5303354 + -11.8  -6.38039   CCACCAAACAAAAAA              CCGCGC CTTT GCGCGG               TTTTTTTTTTGCCTG 100 35
LOY45_RS24410 5305729 .. 5305773 +  -3.3  -3.36327   ACCTGCAGCAGCCGC GCCTGGGCACCTTGCGCCGGA TAA TTCGGCGCAAATCGGCTGGCC TTGTCGATCAACTCG  47 431
        panB NONE
LOY45_RS24425 5307623 .. 5307635 +  -4.7  -3.14132   TAGGAGCGGGCTTGC                CCCGC GAT GAGGG                TTGATCGCGGGGCAA  47 55
LOY45_RS24430 5309507 .. 5309531 +  -5.5  -3.01712   CCCTGGCCGACTGAC          GGGAGAATCGC CAT GCGCATCGCCC          TGTTCCAAGGCGAAC  48 27
LOY45_RS24435 5310328 .. 5310338 +  -2.4  -2.87211   ATAATCCGCTAGCAT                 GACG GTT CGCC                 TGTATCCGGAGCCGT  39 37
        pqqF NONE
        pqqA 5312946 .. 5312965 + -12.8  -5.27335   CTGCTTGCGGTACAA            CGCCTCGG TCCG CCGGGGCG             TTTTTATTTCAGGAC 100 40
        pqqB NONE
        pqqC NONE
        pqqD NONE
        pqqE NONE
LOY45_RS24470 5318294 .. 5318313 +  -3.5  -3.40403   GGTGTAGTGATCAGG            CC-GTGGC CTCGC GCCGCAGG            TTCTGCTGCGCGGCG  50 440
LOY45_RS24490 5321315 .. 5321330 + -11.8  -2.74515   GCAGGCAAAAGAAAA              CCCCGC CGAA GCGGGG               CTTTGCAGACTGTTT  71 50
LOY45_RS24540 NONE
LOY45_RS24545 NONE
LOY45_RS24550 NONE
LOY45_RS24555 NONE
        rarD 5337979 .. 5337993 +  -2.7  -3.55444   GCTTCCAGGTGCAGG               ACGGC TCGAT GCCGC               TTTCGGCGATCAGCA  47 396
LOY45_RS24570 5340880 .. 5340917 +  -7.5  -2.52543   ATCGCTGGCAAGCCA   GCACCCACAGGGTCGGT GAAT GCAGTACCTGTGGGAGC    TGGCTTGCCAGCGAT  53 68
LOY45_RS24580 NONE
LOY45_RS24585 5344321 .. 5344335 +  -4.2  -3.34522   AGCTTCTGCGACAAT               CGCGAA TAA TTCTCG               TTAGTTAACGCATCT  49 77
LOY45_RS24590 5344875 .. 5344895 +  -2.4  -3.53444   GCGCTGTACGGTGAA            CCGACATG AATAA CAAGCCGG            TTTCGGCGCGGGTGC  46 17
LOY45_RS24595 NONE
LOY45_RS24600 NONE
LOY45_RS24605 NONE
LOY45_RS24610 5349729 .. 5349761 +  -6.2  -2.91264   GCGCGGCTTGGCTCG     ATAGCAATCGCGGGG CAAG CCCCGCGAT-GCGGC      TCTATCAGTCCGCCA  51 22
        aceE NONE
        aceF 5364609 .. 5364629 +  -8.9  -5.74122   CACGCTCGTACCTCA            ACCCCGTCA TTT TGGCGGGGC            TTTTTTTATCTGCTG 100 93
LOY45_RS24665 5367544 .. 5367558 +  -4.2  -4.03413   TCCGCGTGGCCCTAT               CGCC TGACAGC GGCG               TTTCTCTCGGGCAAT  61 19
        msrA NONE
LOY45_RS24675 5368990 .. 5369038 +   -16  -3.53811   CCCATCGCCGGCAAG GCCGGCTCCCACAGTG-CATCGG TGTA CCGCTGACTGTGTGGGAGCTGGC TTTGCCAGCGATGCA  90 64
LOY45_RS24705 5374777 .. 5374814 +  -5.3  -3.61894   GCAGCAGGTTCGGGT   GGCCCGGGTGGCGCTCC CACA GCAGCGCCAGCATGCCC    TTGTTGGAGAGGATT  55 352
LOY45_RS24730 5378166 .. 5378222 + -41.1  -4.56775   TTGGCTGTGAAACCC AATCGCGGGGCAAGCCCGCTCCCACAG GTA CAGTGGGAGCGGGCTTGCCCCGCGATG TTTTTAGGCGGCGCT 100 31
LOY45_RS24770 5388462 .. 5388499 + -10.6  -2.52543   ATCGCCGGCAAGCCG   GCTCCCACAGGTACTG CATGCA CCTTACTTGTGGGAGC    TGGCTTGCCAGCGAT  64 48
LOY45_RS24790 5393133 .. 5393161 +  -8.7  -3.43492   AAAGGATATAGCCTT        CGGCGACGTCTTC ATC GGTGATGCCGCCG        TTGTGCTCCATCTCC  62 114
        gbcA 5395937 .. 5395971 +  -2.2  -4.60041   CAAACACTTTATCCA    CAG-GAC-AGCCCACA GCTAA TGTGGGCAAGTCGTTG    TTTTTCCCGCTAAAT  65 209
LOY45_RS24835 5406092 .. 5406128 +  -5.7  -3.73509   TCCAGGGCGACGCTG    CCAAGCACGCTGTCGAT CCA GTCGGCGGCCTGGATGG    TTTCGCGTTTGATCT  60 441
LOY45_RS24850 NONE
LOY45_RS24855 5409193 .. 5409215 +  -7.6  -2.90075   TCGACGCAGTACCAC           CCGCCGAAGT GAT ACGTCGGCGA           TCTACTTCGAACAGC  52 509
        choX NONE
LOY45_RS24870 5411964 .. 5411993 +  -7.7  -3.87373   GAGAAACAGGGCCTG       GCGCCCGGCGCATC ACA GGAGCGCCTG-CGC       TTTGTGGCAACTATC  69 227
LOY45_RS24880 5413389 .. 5413408 +  -5.7  -4.55287   GAACATGCTTCAAGC            GGAGGGT GACCAA ACCTTCC             TTTTCTGTGCATGGC  75 186
LOY45_RS24885 5413852 .. 5413889 + -19.2  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGATCGG CATGCA CCGGACCTGTGGGAGC    TGGCTTGCCAGCGAT  91 45
LOY45_RS24900 5418224 .. 5418252 + -23.2  -3.09983   CACGCAGTAAGCACT        GCCTGCGGCGGG CTGGC CCCGCCGCAGGC        TGTCTTCAAACTTTT 100 31
        choW NONE
        choV 5420808 .. 5420820 +  -9.1  -3.14881   GAACTCCGGGTTGAA                CACCG CGG CGGTG                TTGATCGAGACCTTG  60 525
LOY45_RS24945 NONE
        mutY NONE
LOY45_RS24955 NONE
LOY45_RS24960 5429376 .. 5429402 + -11.7   -5.1675   CACTAATACCGAAAA        GCCCCAAGCGAA GTGA TTC-CTTGGGGC         TTTTTTCATGCCTGC 100 39
LOY45_RS24965 5430385 .. 5430399 +    -7  -4.37886   GGTAGAACAGTTGCA               GCGCCG ACT CGGCGA               TTTTCTCGGACGTAC  75 525
LOY45_RS24975 NONE
        ppk2 5432163 .. 5432187 +  -4.2  -3.53224   ACCGGCCTGAGCGTG         CTCCAG-GCCG TCGG CGGCACTTGGG          TTTCCCGGCCAACTG  52 31
LOY45_RS24985 5432849 .. 5432874 + -16.2  -4.05446   TGCTTGAACAAAAAA         GGCCGCGATC CTCACA GATCGCGGCC          TTTGTCATTGCACCC 100 188
LOY45_RS24995 NONE
LOY45_RS25000 5436461 .. 5436487 + -19.5  -2.52464   ATTGATTCGCCCCGA         CCGGCATCGCC CTGGA GGCGATGCCGG         TCCCTTGAACAAACC  95 36
LOY45_RS25005 NONE
LOY45_RS25010 5437900 .. 5437919 +   -15  -4.35116   GATAAACCTGTATAA            CGGGGCTG ATCT CAGCCCCG             TTTTCGTATCCGCTC 100 36
LOY45_RS25015 5439616 .. 5439632 +    -3  -2.70932   TGCCCAGGCCGCGCT              TTCTGA AACCG TCGGAA              TACTTGAGCAGCAGG  40 486
LOY45_RS25030 NONE
LOY45_RS25035 NONE
LOY45_RS25040 NONE
LOY45_RS25045 5442028 .. 5442040 +  -3.3  -3.35015   TTCGACCAAACGGAA                TTGCC TGT GGCTA                TTATCAGATCCTTCC  46 44
LOY45_RS25050 5442306 .. 5442344 +  -5.8   -3.0263   CGGCTGGTAACAAAA   CACCTCGCGATAGCCGCT GAA ACCGGGCATCGCGAGGAA   TGTTGCAGAAGTAGT  51 31
LOY45_RS25055 5442521 .. 5442536 + -11.8  -5.26875   TGGAAGCCCCGAAAA              CCCGCC CTTT GGCGGG               TTTTTTCGTTCCAGG 100 73
LOY45_RS25060 5444000 .. 5444049 + -23.7  -3.56643   GTCCGCCCTTCCACG CG-GGTCCATCCAAGCGGGGCTGC AAA GCCGCCCTGCTTGGATGGACCTCA TTTAAAAAATCTAAA 100 59
LOY45_RS25065 5445842 .. 5445857 +  -2.4  -3.12803   CGCTTACATTGGTGG              TCGCGC ATGA GCACGG               TATTCGATATGGATC  42 16
LOY45_RS25070 5446177 .. 5446189 +  -3.3  -3.06671   AACTAGTGGCAAATC                GGTAG CGT CGACC                TGTTGCGCTGAATCT  43 79
LOY45_RS25075 5447228 .. 5447249 +  -7.9  -3.21199   TTCGCTTCACTCACT           GGGAC-CGCG TTC CGCGCGCCCC           TTAGCTTAATCACTA  57 70
LOY45_RS25080 5447699 .. 5447718 + -10.6  -4.08692   CGCTTCTCTCACTCG            GGACGGGC TAAA GCCCGCCC             TTTTACCAAGCGTTA  81 67
LOY45_RS25085 5448316 .. 5448334 +  -6.6  -3.07344   CCTAATAAGTCGAGC             CTTCGCCG GAA CAGCGGAG             TCTGTTCGACGATCA  54 36
LOY45_RS25105 5452351 .. 5452364 +  -6.7  -3.57144   CGACTAGATCAGACA               GGCTT TCCC AAGCC                TTTGCGCCTCAGCGC  60 109
        tssA NONE
        tssB NONE
        tssC 5476700 .. 5476713 +  -2.4  -2.83504   GCCACACTCTGGAGA               CAAC ATGGCA GTTG                ATATTTTCATCAAGA  39 103
LOY45_RS25210 5477288 .. 5477298 +  -2.4  -3.14344   TTGAATCCCACCACC                 GGAG CCG CCCC                 TTGGTAGCCGAAATC  42 121
        tssE NONE
        tssF NONE
        tssG NONE
        tssH 5483348 .. 5483364 + -11.5  -3.54424   CTACCACTTCAGCGA              CGCGCCG TGA TGGCGCG              TTTGACGAGATAAAC  77 16
LOY45_RS25235 NONE
LOY45_RS25240 NONE
LOY45_RS25245 NONE
LOY45_RS25250 5490834 .. 5490864 +  -8.3  -2.50443   GTGAAACCCGAGGCT       GGCCATTGCTG CGGCAGATT CCGCAATGGCC       CTTGCTGACGTATCA  55 37
LOY45_RS25255 5492168 .. 5492178 +  -2.4  -3.14344   GTCCACGGAAATGAA                 CCGC CCG GAGG                 TTAATGCAGCAGCTC  42 126
LOY45_RS25270 5495293 .. 5495304 +  -4.4  -2.97747   GGGGCGCTTTGCCTA                TCCT AGGA AGGA                 TCTCTCATATCAGCG  46 105
LOY45_RS25275 5496982 .. 5496999 + -14.1  -3.16564   GCCGAAAAGAAACAA             CCCCGGC CTAG GCCGGGG              TTGCTGGAGTCGCCA  81 15
LOY45_RS25290 5501616 .. 5501643 + -16.4  -4.46615   CCAAGCGACTAAAAA        GGGCGGCATTGT TCAG ACAATGTCGCCC         TTTTCATTCCTGCTG 100 44
        rfbB NONE
        rfbA NONE
        rfbC NONE
        rfbD 5510697 .. 5510723 +  -3.6  -3.30159   CGCTGATCGACTGCC         TGAAGTAGCGCA TAA TGCGCCAGATCA         TTCTGGCGCAGTTGC  48 18
LOY45_RS25335 NONE
LOY45_RS25340 NONE
LOY45_RS25345 5514421 .. 5514431 +  -6.8  -3.29511   ACACCGCTAAGGCTT                 GCTG CAA CAGC                 TTGTCGCGCCATGGC  56 31
        yrfG 5516774 .. 5516785 +  -2.2  -4.24075   GTTGCCGACCGCCAG                GAGG ATCT TCTC                 TTTCTCTTCCTGGCT  63 263
LOY45_RS25370 NONE
        fdhD NONE
LOY45_RS25380 5521247 .. 5521270 + -14.6  -2.72344   GACAGGCACAAAAAA          GGCCCTGACA TCAC TGTCGGGGCC           TCGTTCCAAGTAAAC  78 55
LOY45_RS25385 5522063 .. 5522077 +  -5.6  -3.30771   TACTCACCCGCGACC               TAGGGG CAA CCCCGA               TTCTGGCGAATATAG  52 181
LOY45_RS25390 5522989 .. 5523002 +  -4.5  -2.79796   GCCGATCCTGCCCTC               GGTGT TCGA ACGCC                TATGATGGCCTGCGC  44 7
LOY45_RS25395 5524041 .. 5524052 +  -7.2  -3.15544   GCTGACCACGAAGCC                GGCG ACCT CGCC                 TTCCTGCAGGTCCAG  51 281
LOY45_RS25415 5527943 .. 5527957 +  -5.6  -4.24342   GTCATGCAACTGATG               CAGCTG GCG CCGCTG               TTTCTTGGTGGGCCG  70 49
LOY45_RS25425 5528925 .. 5528935 +  -2.4  -3.06183   GGCCACTATCACTCC                 CTCC ACA GGTG                 TTGCATGAAGATCGC  42 7
        rimK 5530232 .. 5530243 +  -5.8  -3.64259   GATCGGCTCCAGGCA                CAGG CGTA CCTG                 TTCTTCCGGCTGGTT  57 412
LOY45_RS25445 NONE
LOY45_RS25450 5535032 .. 5535047 +    -6  -3.32022   AAAGCCGGCCACAAC              CAGGCG ACAA CGCCAG               TTCCTCTGTCCACCC  54 90
        gshA NONE
LOY45_RS25460 5537358 .. 5537396 + -10.3  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAGGG-ACTGT ATAC ACCGAACCTTGTGGGAGC   TGGCTTGCCAGCGAT  64 48
        tauA 5545948 .. 5545960 +  -2.7  -3.38812   TTTATTTTAACTTTC                TTAGA TCA TCTAG                TCTTATTCCACACCA  48 164
        tauA NONE
        tauB NONE
        tauC NONE
        tauD 5549519 .. 5549542 + -12.5  -2.52543   ATCGCTGGCAAGCCA          GCTCCCACA AAACCC TGTGGGAGC           TGGCTTGCCAGCGAT  72 61
LOY45_RS25540 NONE
        tcyJ NONE
        tcyL NONE
        yecC 5556240 .. 5556262 +   -12  -3.14132   CCGCCTTTCTGATAG           CGCCTGCC CTGCCCC GGCAGGCG           TTCCTCCAGCGACCG  74 59
LOY45_RS25560 5557734 .. 5557744 +  -2.4  -3.89501   GATTTGACCAGACCA                 CTGG AGC CCTG                 TTTATGAGCCTATTG  54 34
LOY45_RS25565 NONE
LOY45_RS25570 NONE
LOY45_RS25575 NONE
LOY45_RS25580 NONE
LOY45_RS25585 5562926 .. 5562964 +  -7.4  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGGGC CAGTGCATGCA GAACCTGTGGGAGC   TGGCTTGCCAGCGAT  53 45
LOY45_RS25610 5570154 .. 5570191 + -15.6  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGGACTG CGTACA CAGAACCTGTGGGAGC    TGGCTTGCCGGCGAT  81 56
LOY45_RS25650 5580523 .. 5580548 +   -14  -5.26316   TGCTGGAATGAAAAA         CGCCGTCGGC CCCTGA GTCGACGGCG          TTTTTTATGGCCTCA 100 52
LOY45_RS25665 5584955 .. 5584966 +  -7.2  -3.28497   TCGGTAAAGTTGGAG                CGCC CGTG GGCG                 TTGAGTTTGACCTCG  54 261
LOY45_RS25675 NONE
LOY45_RS25680 5587411 .. 5587436 +  -2.5  -3.31232   GCCGAAGTGCTTCGC         GTCA-TCGCCTG AAG CAGGCGCCTAAC         CTTTTATCTGGCCAG  44 14
LOY45_RS25685 5587815 .. 5587839 +  -3.5  -2.57132   CCTGGCCAAGAACGC         GGTAGCCAGC GAGTAA GC-GGCAACC          CTTGTGGGAGCGGCG  42 10
LOY45_RS25740 NONE
LOY45_RS25745 NONE
        ssrS 5601138 .. 5601163 + -11.1  -2.87132   TCTGCGCGGGCAATT         GAGCTGTCACC CGCA GGTGGCAGCCC          TCTCTGGGACCGCCC  69 61
LOY45_RS25755 5601981 .. 5601994 +  -6.7  -5.29445   CAGGCAAACTGATCA               CGTTG TCAG CAACG                TTTTTGTTGTTGCAG  89 214
LOY45_RS25765 5602636 .. 5602650 +  -5.7  -3.14132   CCAGGACCGGTGCAG               CGTCA CAATT TGACG               TTAATGCAGCAAGGA  52 81
LOY45_RS25770 NONE
        rbbA NONE
LOY45_RS25780 5607557 .. 5607582 +  -7.5  -4.42238   CGAGCACCTGCTGGA         CCTGCTTCAGG GCTT CCTGACGCAGC          TTTTCCTTGGCCTCG  78 103
LOY45_RS25790 5609291 .. 5609305 +  -5.6  -2.50113   GCGTTCGAGTACGAA               GCCCAG GGC CTGGAC               CTTGCTGCCATCCTC  45 298
         ppx 5616175 .. 5616191 +  -5.7  -3.51597   GCTCGAGCAGAGTGG              CCTGGGC ACT GCGCGGG              TTCTGGTTGCCGGTT  55 59
LOY45_RS25835 5620322 .. 5620334 +  -4.7  -2.57211   GCAGCTCCAGCCTCA                AGGCC CAG GGCCG                GTTCTCCAGCGCCGT  43 91
        elbB 5622366 .. 5622381 +    -9  -2.83271   CAGGATCCGGTCCAG              GGCGTT GGCA AACGCC               TGCTTCTCGCGGTCG  55 225
LOY45_RS25860 NONE
LOY45_RS25865 NONE
        lpoB 5627458 .. 5627512 +  -2.7  -3.42056   ACGAAAAAGAAATCC GCAAGACCACGGAGCGCTAAGCAATG CGTG CATGGATGGGCGTTCTG-GGCCTGGC TTGTGCGTTCAGCGT  48 6
LOY45_RS25875 5628233 .. 5628250 + -12.7  -5.37043   CTGAGAAAGCAAAAA             GGCGACC TTCG GGTCGCC              TTTTTTGTGTGCGGT 100 37
LOY45_RS25895 5632379 .. 5632394 +  -7.5  -4.11394   CAGCGGGTTTAGCTG              CCGGC TTGGCT GCCGG               TTTTGCCGCTGCAGT  71 375
LOY45_RS25905 5633986 .. 5634003 +  -4.1  -3.05596   TTCCTCTTTGACCTC             GTGC-GCG TTG TGCAGCAC             TTCGATCAGACAGTC  45 68
        argH 5642167 .. 5642179 +  -4.1   -4.4017   GGCATCTGCGCTTCC                TTGTC GGC GGCAA                TTTTCTGCACGTTCG  69 133
LOY45_RS25960 NONE
LOY45_RS25965 5643560 .. 5643606 + -19.4  -2.62184   CTGCCTTGCAGTCCA TCGCCGGCAACGCCGGCTCCCA CAG TGGGGGCTGGCCTTGCTAGCGG TCGTATCCACACCAA  95 47
LOY45_RS25970 5647007 .. 5647024 + -14.1  -3.55622   CGATATAAAGCAAAA             CCCCGCC CAAG GGCGGGG              TTTGCAGGAATTCGG  86 490
LOY45_RS25990 NONE
        lysA NONE
        dapF NONE
LOY45_RS26005 NONE
        xerC NONE
LOY45_RS26015 5652529 .. 5652547 + -11.6  -5.14563   TACAGACACAAAAAA             GCCCGCAG CGA CGGCGGGC             TTTTTTGCTGACGGG 100 135
LOY45_RS26035 NONE
LOY45_RS26040 5656259 .. 5656275 +    -5  -2.65264   CCACTACGCTTGCAG              AGCCGC AGGAC GCGGCC              TCGTCTAGATCATGG  46 261
LOY45_RS26045 5657834 .. 5657847 +  -2.3  -3.10464   GGCAACAGCCCACCG               CACCG AGAC CGGTA                TGTTCGCATTCGTCC  42 68
LOY45_RS26050 5659355 .. 5659370 +    -6  -3.90112   AGCCGGTACGCAGCG              CCGGCG CCGA CACCGG               TTTCATTGCCGAGAA  62 103
LOY45_RS26065 5663265 .. 5663298 +  -5.3   -3.6502   AGCACTGCATTCCTC     GCTTTCATGTAAG-GG TGC CCACTTACCAGGAAGC     TTTCGATGCCCGCTC  56 82
LOY45_RS26070 5664795 .. 5664815 +  -8.1  -2.73124   CCGGCCTTGCCGGCG            ATGGGCCGC AAA GCGGCCCCG            ATTTAGAACCTAACG  57 119
LOY45_RS26085 5669698 .. 5669717 +  -3.4  -4.64676   GCGCCAGGTTGATCA            TCGCGTGC ACCA GCTTGCGG             TTTTCTTCGCGCTGC  72 271
         rep 5673457 .. 5673483 +  -2.8   -3.1552   GTTAGATAATCAACC         TTTGCTGCGGCG TAT TGCCGTGGCCAC         TCTTGCTACATCGAG  43 36
LOY45_RS26100 5674446 .. 5674473 +  -6.2  -3.24924   AACCGTGCGTGCCTT        TCGCGCAGCG CCTGCAAA CGCTGCGGGG         TGTTCTCGGTGAAGC  51 389
        dadR 5681093 .. 5681119 +  -4.2  -4.20516   CGGCTTCCTGCTCGG         CGGCGCTCTTGC GCG GCAGGCGGGCCA         TTTCTTCGCTGGAGG  66 244
LOY45_RS26145 5682662 .. 5682673 +  -5.8  -3.14344   CTAAGAGCGCCAGAA                GGGT TTCA ACCC                 TTCCTCGCGGGCCTG  52 37
LOY45_RS26155 NONE
LOY45_RS26160 NONE
LOY45_RS26175 5689422 .. 5689435 +  -8.1  -3.07816   AACAGAGCATGGCGT               TGCCC AACC GGGCA                TTCAATCAATCGAAG  60 69
LOY45_RS26180 5689715 .. 5689740 + -19.1  -5.14563   GCGGCATAAAAAAAA         GGGCCCGTATC CTGA GATACGGGCCC          TTTTTTCGTCAGCCG 100 75
LOY45_RS26195 5692380 .. 5692390 +  -6.8  -3.25823   GCGCCTCGAAGGCCA                 GCAC CCG GTGC                 TTGCTGTCGAGAAAC  54 288
       coaBC NONE
         dut NONE
LOY45_RS26215 NONE
        argB 5697115 .. 5697132 + -12.7  -5.83226   TGAGGCACAAAAAAA             GGCGACC CTAT GGTCGCC              TTTTTTTATTGGCTT 100 100
LOY45_RS26230 5698668 .. 5698684 +  -9.4  -5.28176   CTCAGCCACAAAAAA              GCCGAC TTCGC GTCGGC              TTTTTTGTCACTGCA  95 45
LOY45_RS26245 NONE
         gmk 5701922 .. 5701939 +  -2.7  -2.62184   AGTAGAAGCAGATCA             TCAT-GCC CAG GGCGGTGA             TGGTGTCAGCCAGGA  38 382
LOY45_RS26275 5708040 .. 5708098 + -33.5  -3.14878   GCCAGTGAAATCGTC -C-TCGCGGGGCAAGCCCGCTCCCACAGA ACC TCTGTAGGAGCGGGCTTGCCCCGCGATGC TATTGAATTGAGCAC 100 33
        rpoZ 5708568 .. 5708582 +  -2.7  -2.52464   CTGGTCGACGTAGTA               CGGCG CCGGT CCCCG               TCCCTTGGCAAGAGG  39 49
        spoT NONE
LOY45_RS26290 5711129 .. 5711148 +   -15  -3.14132   GTAATACCCCCTGAA            GGCGCACC GCCC GGTGCGCC             TTCATCCCCCGCCCC  83 37
LOY45_RS26295 5712003 .. 5712017 +   -10  -3.15544   AGTGCCCGGGCCCGG               GCGTTG CTG CAACGC               TTGCTGCCGGTGCGC  63 111
        exbB NONE
        exbD NONE
LOY45_RS26315 5715163 .. 5715217 + -10.9  -3.31144   GAGCAAGTCTGATAA CGTGCGTCTATCGA-TTGCAGCCGCTA TGC TGG-GGCCGCAACTTCATGGACGCACG TTATGACCCTCACAG  70 62
LOY45_RS26320 NONE
        recG 5718234 .. 5718265 +  -2.9  -3.44229   AGTGTGACGCCCGTC      CCAGATTGCAGCC AGCCCA GGGTTCAAGCTGG       TTATACTCATGCGAT  48 34
LOY45_RS26330 5719711 .. 5719733 + -14.9  -4.44355   CAGCACTGAGGCCTG           GGCCTGACC CTGAC GGTCAGGCC           TTCTTTTTCGGCTTC 100 32
LOY45_RS26385 NONE
        ubiA 5726767 .. 5726784 +  -2.6  -4.40132   ATCTTTCATGCCATC             ACCGGT CATGTC ACCGGC              TTTCTTGTCCTTGAT  65 126
        phoB 5727997 .. 5728012 +  -3.2  -3.41878   AGCAAACGCAGATCC              GCTTCA ACCT TGCAGC               TTGTAGCTTGCAACG  48 84
        phoR 5729343 .. 5729373 +  -9.7  -2.90349   CTCCCCTGCCCAGAT      CGCGGCGCGC-CAGG CCT CCTGAGC-CGCCGCC      CTTTAAATTTGCACA  65 4
LOY45_RS26410 5731102 .. 5731116 +  -5.6  -4.29325   GAAGGATGGCTGCCA               CGGCCG CTT TGGCTG               TTTTCAGTCTTGATC  70 309
LOY45_RS26455 NONE
LOY45_RS26460 5743532 .. 5743555 +    -3  -3.96892   CGGGGAGTTGTGGTC          GATTTCGGGC ATCT GCTCGAGGGC           TTTCTGGTCCGACTT  58 483
        aspA 5748407 .. 5748432 + -16.1    -5.626   CCTCTCACCTTTTGA         GGGCCCAGGGA TCAC TCCCCGGGCCC          TTTTTTTATGCCCTC 100 81
LOY45_RS26495 NONE
LOY45_RS26500 NONE
LOY45_RS26505 5752237 .. 5752255 +    -3  -3.16689   CCAGGGGGCGAAATC             CGGACAAC CAG GTTGGCCA             TATTGATCCCCTTTT  43 58
LOY45_RS26510 NONE
LOY45_RS26515 5754623 .. 5754650 +  -3.2  -3.85698   GGCAGCCAGTAATCG        CTCAGGGCGTTG AGCT CGACGCCCACCG         TTTCTGCACGGGCAA  56 159
LOY45_RS26525 NONE
LOY45_RS26530 NONE
LOY45_RS26535 5758169 .. 5758184 +  -2.4  -3.78775   TGACATGGCCCGGCG              CGCTGG CCTG CTTGCG               TTTGCTGCTGCCGCC  53 312
LOY45_RS26550 5762581 .. 5762636 + -24.9  -2.92463   ATGACAAATCAATGA ACCTC-TAGGAGCGGGCTTGCCCCGC AATTC GCGGGGCAAGCCCACTTCTAAGAGGA TGTATCAGTCATCCA 100 271
         zwf 5765259 .. 5765289 +  -8.3  -4.15565   GCGTCTTCGCTACCC       TCGCTCAGGCC ACGGATAAA GGCCTGATCGA       TTTTCACGTAATCCA  72 230
        uvrD 5770435 .. 5770446 +  -2.2  -2.94218   AAGCTGGAAACATTA                TGGC GCTG GTCA                 TGTGTCCTACAACCT  41 132
LOY45_RS26580 5771386 .. 5771404 + -13.1  -4.67038   CATTGCACAAAAAAA             CCCCGGG CTTGT CCCGGGG             TTTTGCTTTTAGCGC  95 49
LOY45_RS26585 5771950 .. 5771960 +  -8.2  -3.06183   TCGCCACGCCTTCCT                 GCGC GTG GCGC                 TTCGCTACCGCTCCA  60 93
LOY45_RS26595 5774637 .. 5774681 +  -9.8  -3.53343   GGTGCACGATGCGGT CCTGGGCACGCACCAGCTCC AGCTC GTAGCTGGCGCAGGCCTGGG TTTCCAGCAGCACTT  65 75
LOY45_RS26605 5775973 .. 5775991 +   -11  -3.84246   GCGCAACTAGGCGCG             GCAGGCCA GCA TGGCTTGC             TTTAGTCGTTCAGGG  80 31
LOY45_RS26625 NONE
       folE2 5780449 .. 5780471 +  -4.8  -3.68366   GAGTACAGCCGGACT           TGGGATCCTG CAG CGGGATGTCA           TTGGTTTTCACCTGC  55 262
         cls 5782561 .. 5782573 +  -3.3  -3.53091   TGCAGGCGCAGGCTC                TCGAC GTC GACGA                TTTCCAGGCCCGCCT  49 273
        lpdA 5785588 .. 5785604 +  -2.9  -2.70932   CAATGATCGGGCTGG              CAGGTGT GCG ATACCCG              TCGTTGCGCAACACC  40 499
LOY45_RS26715 5798652 .. 5798675 +    -8  -3.86897   TGGCACAGATGAATA          CCGGCCCCCA GGGC TGAAGGCCGG           TTTATCCACAATCAG  71 9
LOY45_RS26750 5806266 .. 5806285 + -10.7  -3.14211   GGGCGCGTCAAAGAA            GGGAGCC AGTGGC GGCTCCC             TTCATCCGCGACAGT  68 123
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC 5824052 .. 5824068 - -10.8  -4.41353   CGACAGATAGCAAAA              CGCCCC ACGAG GGGGCG              TTTATCCACAGGTTA  88 54
        mnmE 5822595 .. 5822636 -  -4.3  -4.85599   GGGATTGGAGAAAAA GGCTGCTGCAGTCGGGTCCG TTG CAGACCCGACGGTAG-ATCA GGATGTTTACTTGCC  78 32
        mnmG 5820237 .. 5820255 -    -3   -3.2375   GACCTGAGAACTCAA             GCGCTTTG CTC CAACTCGC             GGCCTGCGCCGCGTT  46 3
        rsmG NONE
LOY45_RS26820 NONE
LOY45_RS26815 5817830 .. 5817849 -  -5.7  -2.62515   AATGCGCGCAGAGTA            TAGGGGC GGTTTA ACCCCTA             TTCAACTGCCGGGTA  48 76
LOY45_RS26810 5817340 .. 5817350 -  -2.4  -2.71791   ATGGTTGCCTCAAAC                 GCCC TAA GGTC                 TCGAAAGTCTTATAT  38 18
        atpB 5816371 .. 5816382 -    -3  -4.14392   TTTGAAGCGGTAAAA                CAAA ATCG TTTG                 GTACAGCTGCCCTTG  58 100
        atpE 5816036 .. 5816055 -  -8.6  -3.86202   GTCCATCACACCAAA            CCACTCGA GAAT TCGAGTGA             TTAGCCGGCGATTTG  69 26
LOY45_RS26795 NONE
LOY45_RS26790 NONE
        atpA 5813385 .. 5813406 - -15.1  -3.17212   CTATCAGGTTAGCAA           GCGGGGGCC GCAA AGCCCCCGC            TGCGGCTTACCAGGT  83 32
        atpG 5812507 .. 5812523 -  -9.3  -3.60971   ATTTGAACCGTTAAA              CCGCGGC AGC GCCGCCG              ACGATTTCCGAGATC  68 4
        atpD NONE
LOY45_RS26770 5810576 .. 5810593 - -11.3  -5.61881   TCGGAAAAAGAAAAA             GGGTAGC CGAG GCTACCC              TTTAACTCAATCGCA 100 66
        glmU 5808986 .. 5808997 -    -3  -3.81488   CGTTTCGAAAGATAA                TGAT GCCA ATCA                 AAACCTATAGCGACT  53 171
LOY45_RS26760 NONE
        glmS 5806263 .. 5806288 - -15.5  -3.53761   GAAGGGCGCGTCAAA         GAAGGGAGCCA GTGG CGGCTCCCTTC          ATCCGCGACAGTTTT  90 79
LOY45_RS26745 NONE
LOY45_RS26740 NONE
LOY45_RS26735 5801825 .. 5801858 - -15.5  -5.26316   CGATTCTAGAAAAAA     GTGCATTCAAATCGG TGAC CCGATTTTAATGCAC      AAGGGAGGAGCACGT 100 304
        hcnA 5801326 .. 5801357 -  -2.8   -2.8294   CACCCCCGACAATCA      CTGGAC-GCAGGCTC ATG GTGCCTCCTGCCCGG      CAAAGCGGTTGGTCC  41 6
        hcnB NONE
        hcnC 5798652 .. 5798675 - -12.4  -3.22777   TGGCACAGATGAATA          CCGGCCCCCA GGGC TGAAGGCCGG           TTTATCCACAATCAG  77 37
LOY45_RS26710 5796568 .. 5796621 -  -6.1  -3.64703   TTGTTGTTATCGAAA CCTGA-ATGGCGATAC-CTGCCGGGC GCGGG GCCGGGCAGTGT-TCGCAAGGTCAGG TTAGGAGCAGCAGCA  58 101
LOY45_RS26705 NONE
LOY45_RS26700 5793769 .. 5793780 -  -3.6  -3.37354   CAGAGTTACCCACAA                CCCC GGTA GGAG                 CGGGCTTGCCCCGCG  48 48
LOY45_RS26695 5792622 .. 5792636 -  -3.5  -3.38046   GGGGCACGGTAAATA               TCCGC TTTGT GCAGA               CCTTTATCCGTTTTC  50 50
        benA NONE
        benB NONE
        benC 5789629 .. 5789663 - -11.3  -5.45652   ACCTCGAATAAAAAA     GGGGCCGACCGTACC CGCAC GATGCGCCCGGCCCC     ATAAAATGGCTTCAG 100 37
LOY45_RS26675 NONE
LOY45_RS26670 5787692 .. 5787708 -  -2.1  -3.63515   TTTCACGTGGAACAA              CATGGCG TCT CTCCTTG              CTTACGTGCGGCTGA  48 27
        catC NONE
        catA 5786367 .. 5786401 - -14.4  -2.52543   ATCGCTGGCAAGCCA     GCTCCCACAGGGTT TGCACTG AACCTTGTGGGAGC     TGGCTTGCCAGCGAT  78 56
LOY45_RS26655 5784748 .. 5784785 -  -7.6  -3.51825   TGAGGTCAATTACAA   CCTGATCCCGGC-GGTG ATCTA CACCCGCCCGGAGCTGG   CCAGCGTTGGCAAGA  60 355
        cfaB 5782246 .. 5782291 - -12.5  -3.07344   TCACCGCCGAAGACA CTCGCGACACGCACCGCCTGC AACA ACTGGGGATGCGTATCGCCAG GTTGATCTCACCGAT  75 54
LOY45_RS26635 5779993 .. 5780003 -  -6.8  -4.12902   CAACCAGGCCGAAAA                 TGCC TTG GGCA                 CTGCGGTACAAACTG  68 241
        zigA NONE
LOY45_RS26615 NONE
LOY45_RS26610 5775491 .. 5775506 -  -5.4  -3.31182   GGAATGAAAAACAAG              GCGCGCA GTA TG-GCGC              TAAATGCCACCTGTA  52 483
        pdxY 5774500 .. 5774527 -  -8.5  -4.29396   AACCAGCGAGGAAAA        GCGCCGTTT-CC TGCAG GGCAAACAGCGC        CGGCTGATCCGTCAG  77 82
LOY45_RS26590 5771936 .. 5771959 -   -11  -2.57881   TAATGTTCGTAGAAT          CGCCACGC CTTCCTGC GCGTGGCG           CTTCGCTACCGCTCC  67 83
LOY45_RS26570 5764997 .. 5765043 -  -8.5  -3.14564   CCATGCCGGCAGCAA CGGCCCGGACCAGGCGCA-CAG CCTG CTGGCGCACCAGGGCCGCGCCT GGCACCTTTAAAAGC  60 33
        hexR 5762582 .. 5762635 - -29.1  -3.52317   TGACAAATCAATGAA CCTC-TAGGAGCGGGCTTGCCCCGCA ATT CGCGGGGCAAGCCCACTTCTAAGAGG ATGTATCAGTCATCC 100 31
LOY45_RS26555 5761808 .. 5761828 -  -4.7  -2.57132   CGCCTCTCGGACAAC            CGTGATGAC CTG ATCATCATG            TCCATGGTGCCCCAG  43 474
LOY45_RS26545 NONE
        oadA 5757899 .. 5757916 - -10.5  -5.75945   AGCGGGCAAAAAAAA             GGGGAGC ATAC GCCCCCC              AGAGGTTAACCGCTT 100 60
LOY45_RS26520 5754478 .. 5754512 - -10.8  -2.63348   TGGACCAAGATCAAG    GCCGGGACCTGATCGT CACTC ACG-CCAGG-CCCGGC    GCAAGCGGGCCAGGG  64 6
LOY45_RS26485 5745681 .. 5745716 - -18.4  -5.00884   AGGCGCGTCAAAAAA    CAACAAGCCACGCGGG ACGA CCGGCGTGGCTTGTTA     TACGAATTAGGGCCG 100 147
        purE NONE
LOY45_RS26475 5744038 .. 5744057 -  -2.8  -2.70826   CAGAGGGATAGAGCA            GCGGGAAGG TTC CCTTCA-GC            CCTTGATCAGGGCTT  40 21
LOY45_RS26470 5743667 .. 5743696 - -16.5   -4.7254   ACGGTGCATGAAAAA       GCTCGGCAACGAA GGAG TTCGGTGCCGAGC        ATTCTAGCCTGCCGT 100 40
LOY45_RS26465 5742749 .. 5742763 -  -2.7  -3.71873   TGAGCTACATCGAAA               CCCTG GCCAA CTGGG               AGCAGCGCCAGCAGC  53 389
LOY45_RS26450 5739980 .. 5740006 - -18.1  -3.89971   GACAATTAGATGAAA         GGCCATCACCG GCTAG CGGTGATGGCC         TTTTCAAAATGTTGC 100 62
LOY45_RS26445 5738801 .. 5738831 -  -9.7  -5.09895   CAGTGACGCAAAAAA      GCCCGCCGCGCAGA TACC CCTG-GCAGCGGAC       TCGCAATTTGTGGCG 100 77
LOY45_RS26440 NONE
        pstA 5734728 .. 5734746 -  -5.8   -4.2679   CAAGTTTGAGCAAAA             GCGGCTTG TAG CTTGCCGC             TTATGGCTAATAGCT  69 46
        pstB 5733744 .. 5733759 -  -2.6   -2.7563   AAAAAGCTTCAAGTA              GCAAGCT TCA AGCTT-C              AAGTTTGTTCGTGTC  39 102
        phoU 5732919 .. 5732938 - -16.4  -4.55128   ACCCGCAAACGAAAA            CGCCCGGC CAAG GCCGGGCG             TTCATTCTCGGGCAG 100 43
LOY45_RS26420 5731817 .. 5731865 -  -2.1  -2.78384   GGGTGTGCCAGGAGA CGAGCGGTGCTTTGATCGCCGGC AAG GCCGGCTCCCACAGAAACGATAG TCACAGACCCTGTGG  39 67
LOY45_RS26415 5730777 .. 5730793 -  -2.1  -4.01737   ATCAAGAAGATGAAA              GGGCCGA AGA TCGTCCT              GGCCAAGGTGCTCAA  54 57
LOY45_RS26395 5726724 .. 5726747 -  -2.4  -3.05384   TGCCCCGCGATTGAA          GGCACTGTTAC TTG ATCAC-GTGCC          AGACATCTTTCATGC  42 9
LOY45_RS26380 NONE
LOY45_RS26375 5723566 .. 5723582 -  -7.9  -3.61398   GCTGCTCTTCAAGAA              CAGCGCC CAA GGCACCG              CAGGCTCTAAACTGC  63 143
LOY45_RS26370 5723184 .. 5723205 -   -13   -5.4505   GGCGGCAATAAAAAA           CGGGCACC TTGTGC GGTGCCCG            TTTTTTACTGCAATC 100 56
LOY45_RS26365 NONE
LOY45_RS26360 NONE
LOY45_RS26355 NONE
LOY45_RS26350 NONE
LOY45_RS26345 NONE
LOY45_RS26340 NONE
LOY45_RS26335 5719580 .. 5719597 -  -3.3  -3.72576   CGGGCCCGCAGGAAA             GCATCCC CGAC GAGCTGC              TCGAGCGTCTGAACC  54 155
LOY45_RS26300 5711822 .. 5711843 -  -5.9  -3.60475   AAGCGTGACGGCAAA           CAG-CTGGAA ATC TTCCAGGCCG           TCAATCAGGCCCAGG  57 103
LOY45_RS26270 NONE
LOY45_RS26265 NONE
LOY45_RS26260 NONE
LOY45_RS26255 5701570 .. 5701609 -  -7.7  -3.14132   TGCTTGCCTGAGCAA  CCGGCACCTCCAGCCGC TTAACG GCGGCTGGAGACCGTGG   CGTGACGGTGCAAGG  57 3
         rph 5699112 .. 5699133 -  -5.1  -2.52464   CCCGGGTTGAATTCA           GTCAGCCAGC GAG GCTTGCTG-C           AGTTCGAACAGGTCG  46 1
LOY45_RS26235 5698668 .. 5698684 -  -9.4  -5.28176   CTCAGCCACAAAAAA              GCCGAC TTCGC GTCGGC              TTTTTTGTCACTGCA  95 56
        pyrE 5697115 .. 5697132 - -12.7  -5.64274   TGAGGCACAAAAAAA             GGCGACC CTAT GGTCGCC              TTTTTTTATTGGCTT 100 40
        radC 5691714 .. 5691729 -  -6.1  -4.09243   CAGACCTGGGTAAAA              TCGGC ATCAAG GCCGA               AATCCGCGTGATCGA  66 410
        rpmB NONE
        rpmG 5689701 .. 5689755 - -20.3  -3.39216   CTGGTACCGAAAAAG CGGCATA-AAAAAAAGGGCCCGTATC CTGA GATACGGGCCCTTTTTTCGTCAGCCG GATCAATTACTTGAT 100 32
LOY45_RS26170 5687262 .. 5687310 - -35.5  -5.40072   TTCCTTCCAAAAAAA TCGCGGGGCAAGCCCGCTCCCAC ACT GTGGAAGAGGGCTTGCCCCGCGA CAGGTCCGCCAGGAC 100 41
LOY45_RS26165 5685798 .. 5685815 - -11.3   -2.5547   AGCCTGCACAGCAAG             GCGATCG TCTT CGATCGC              AAGAAGACCTTCATC  62 310
LOY45_RS26150 5682191 .. 5682209 -  -3.1  -4.07568   GTTGCTGCCGCAAAA            CATGGCCG TCTG CGACCA-G             CGCGTGGCCCTGGAC  60 463
LOY45_RS26140 5680493 .. 5680511 -  -5.9  -4.09739   TGAACTGGGCGAAAA             GGTCGGC CTGTC GACGACC             CCCTGCACCGAGCGG  66 392
        dadA NONE
LOY45_RS26125 5678546 .. 5678588 - -14.8  -5.32944   GTTAGAAGTAAAAAA CCCGGTGCCCGAAGGCAGC TGGTCG GCCGCCGGC-GGCACCGGG TGAGGGATCGGGTGT 100 40
         alr 5677402 .. 5677414 -  -3.3  -3.25896   TCAGTATTTACAACA                CTTCG ACC CGCAG                CCTGTCCGCTTTGGC  46 44
LOY45_RS26115 5676701 .. 5676711 -  -2.4  -3.50853   GCGGCGCAAGTATAA                 CGGG AAC CCTG                 CCTCACCGAAACAAC  46 90
LOY45_RS26110 5676168 .. 5676201 - -11.8  -4.12188   TGACCAGCGCTAAAA     CGCA-CAAAGCCCGC ACGTG GCGGGCTTTGCTGGG     CAAGCGCTGGGCTTA  87 38
LOY45_RS26105 5673903 .. 5673913 -  -6.8  -3.66178   CTGGCCAACGGCAAA                 GCCT CCC AGGC                 GCTGATCTCGATCAT  59 290
LOY45_RS26090 5669127 .. 5669151 -  -6.3  -2.62184   CCTTTGCCGACATCA          TCCAGCTGGCT GTG AGCCTGCTGAT          GGTCGCCGCCTGGTT  45 381
LOY45_RS26080 5666809 .. 5666833 -  -2.7  -3.15999   GGTTGAGACATGGAA          GCTCCTGGC AAGAGGG GCCGGGATC          GTCCTGATCACGCTG  43 152
LOY45_RS26075 5664709 .. 5664725 - -13.7  -2.56715   AGCTGTAGGAACCCA              GGGCTGC TAC GCAGCCC              ATCGCTGGCAAAGCC  75 125
LOY45_RS26060 5660622 .. 5660654 - -16.3  -2.52543   ATCGCTGGCAAGCCA      GCTCCCACAGGGAGC AGC GGTCCTTGTGGGAGC      TGGCTTGCCAGCGAT  85 57
LOY45_RS26055 5658902 .. 5658915 -  -8.1  -3.01924   GACCGCCGTGGAATA               CCTGG CCGA CCAGG                TGATCCTCGGCGTCG  54 391
        glnK NONE
LOY45_RS26025 5653321 .. 5653338 - -12.7  -5.42259   TTACGGGCAAAAAAA             TGCCCGG CAAG CCGGGCA              AGTTTTTTTCGAGGC 100 43
LOY45_RS26020 5652529 .. 5652547 - -11.6   -5.4492   TACAGACACAAAAAA             GCCCGCAG CGA CGGCGGGC             TTTTTTGCTGACGGG 100 46
        cyaY NONE
LOY45_RS25980 5647001 .. 5647029 - -15.4  -4.03234   TCTGGGCGATATAAA       GCAAAACCCCGCC CAAG GGCGGGGTTT-GC        AGGAATTCGGCACAG 100 95
         rnk 5646065 .. 5646077 -  -4.8  -4.30576   GTTCCACGATGAAAA                CAGC CTGTT GCTG                CCGCTGCAGCGCTTT  68 494
LOY45_RS25955 5642015 .. 5642070 -  -8.2  -2.82623   GCGCCTGCACAAGTA CGCG-C-TGCCGTAGCCCGCGGCAAG GCGCTG CTCGCCGCGCGCTAAGCCCTGTCGCG TGCTGCTGCCCGGCC  57 70
LOY45_RS25940 5639542 .. 5639565 -  -2.3  -2.83299   CTAGCAGATCTAAAT          CATGGTAGG AGGCGA CCTTCCCTG           GCCGTCGACTGCTCC  39 54
        hemC NONE
LOY45_RS25930 NONE
LOY45_RS25925 NONE
LOY45_RS25920 5635346 .. 5635359 -  -2.3    -3.794   GGCTAACGCAGGAAA               TTGGC TCAA GCCCA                TAGGCCCGCGTTTTT  51 60
LOY45_RS25915 5634550 .. 5634586 -  -3.6  -2.64616   CGTGCAGGGAGATTA   TTCCCGTGCGC-CCTAG CCTT CAAGGTACGCACGCGAC    AAAGTTCATACAAGT  42 95
         rsd 5633602 .. 5633614 - -10.5  -3.06183   TTCATGGCCACTGAA                CGGGC CAG GCCCG                GAGTGCGTGAACTGG  63 370
LOY45_RS25900 5631700 .. 5631717 -  -2.5  -3.82604   GCAGCGAACGAACAA             CGGGTGC GACA GCTCACG              GAGCTGGCCGAGACC  55 313
LOY45_RS25890 NONE
LOY45_RS25885 5628916 .. 5628926 -  -2.4  -2.63073   CGTTTCCAATAACAT                 CGCG CAC CTCG                 GCACTAACTTGTTAC  38 98
LOY45_RS25880 5628233 .. 5628250 - -12.7  -5.04601   CTGAGAAAGCAAAAA             GGCGACC TTCG GGTCGCC              TTTTTTGTGTGCGGT 100 58
LOY45_RS25855 5622804 .. 5622830 - -10.1  -5.07486   GATTTCCAACAAAAA         CGGGGGAACAG TATCC CTGCTCACCCG         TTTCGCTTCAAATCA 100 38
LOY45_RS25850 5622093 .. 5622105 -  -3.3  -4.08394   ACATGCTGGCCAAAA                GCATC AGC GAAGC                GGCAGGTGGCATTTA  60 244
        hemB NONE
        ppk1 5616069 .. 5616120 - -15.1  -3.13504   GCTGGATGAAAACCA GCTGACCCAGGCC-GAC-TTCGGCC TGGA GGCCGAGTGGCTGGCCCGGGTCGGC TTCGTACTCAGCGTA  83 33
        trxA 5614040 .. 5614058 -  -8.8  -5.06016   ACCAGATAAAGAAAA             GCCCCG ACGAATG CGGGGC             TTTTTTCACTCAGAT  91 35
         rho 5612544 .. 5612559 - -11.8  -4.86133   TACAGATAGCAAAAA              GCCGGG TCGC CCCGGC               TCTTGCCCAGCGCAG 100 45
        ubiD NONE
LOY45_RS25800 5609838 .. 5609857 -  -5.6  -3.65991   AGCGCTGCAATACAA            GCCCCCAG GCCT CCGGAGAC             GGCAACAACGGCCGT  56 182
LOY45_RS25795 5608644 .. 5608656 -  -6.2  -3.87318   AAGGACGAGATCAAA                CGCC TGACC GGCG                GCAATGGCGCCGATG  62 465
LOY45_RS25785 5607022 .. 5607042 -  -9.7  -2.90496   CCGCCCTGGAAATCA            TGCTGGCGA AGA TCGGCAGCA            ACGCCCTGGTGGTGG  58 463
LOY45_RS25760 5601450 .. 5601463 -  -2.3  -3.36273   CTGGCCGAAGACCAA               GATGG TGTT CCAGC                GCATCGAAGCCGGCG  45 374
LOY45_RS25735 NONE
        pepP NONE
        ubiH NONE
LOY45_RS25720 NONE
LOY45_RS25715 5595377 .. 5595388 -  -4.4  -3.17075   GGCTTCTCAACCGAA                CTCA CAAG TGAG                 GAGTTACCAGATGTT  47 50
LOY45_RS25710 5594229 .. 5594243 -  -4.2   -4.2349   CTCCCACAGTGAAAA               GAGAGC ACC GCTATC               CCTGTGGGAGCTGGC  65 91
LOY45_RS25705 NONE
        gcvT NONE
        gcvH 5590846 .. 5590863 - -11.3  -3.14132   CTCTTCCTCGACCAA             GCCTCGA GCGC TCGAGGC              ATATTGAGTCTAGGA  71 63
        gcvP 5587891 .. 5587906 -  -6.8  -4.66833   CGCGAATGCGAAAAA              GCCAGT CTGC ACCGGC               CTCATCGCGGGGCAA  76 67
LOY45_RS25670 5584392 .. 5584417 - -13.9  -3.65046   CGTCGAGCGCAACAA         GCGCGGCGACC GCCA GGGCGCCGCAC          AGTTGGCCAACTGGC  84 331
        argE 5581993 .. 5582003 -  -4.6  -3.73122   GACAAGAACGGGAAA                 GCAC ACA GCGC                 TCGAAGGGTTATCGT  57 90
        argA 5580523 .. 5580548 - -12.5   -4.8622   TGCTGGAATGAAAAA         CGCCGTCGGCC CCTG AGTCGACGGCG          TTTTTTATGGCCTCA 100 131
LOY45_RS25645 5577161 .. 5577173 -  -2.6  -2.78384   TCCGGGTTGATCAGA                CCGC AAACA GCAG                GAACTCACGTTCCCA  39 8
LOY45_RS25640 5575681 .. 5575712 -  -9.6  -2.52676   TAGTCTGGCAAGTTA      CAAGGCGC-TCTTTC AAC AAAAGAGGCACCTTG      AAACTCATTGATGCC  62 63
LOY45_RS25635 5574321 .. 5574335 -  -2.1  -3.81885   TACAGAAATAGACAA              GTG-GG AGGT CCTCAC               AAATGTGCCAGTGGC  51 174
LOY45_RS25630 NONE
        potA NONE
LOY45_RS25620 NONE
LOY45_RS25615 5570154 .. 5570191 - -16.3  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGGACTGC GTAC ACAGAACCTGTGGGAGC    TGGCTTGCCGGCGAT  85 54
LOY45_RS25605 NONE
LOY45_RS25600 NONE
LOY45_RS25595 5563555 .. 5563593 - -20.4  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGGTCTG CACGCAC CGGACCCTGTGGGAGC   TGGCTTGTCAGCGAT 100 48
LOY45_RS25590 5562926 .. 5562964 -  -8.8  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGGGCCA GTGCATG CAGAACCTGTGGGAGC   TGGCTTGCCAGCGAT  58 55
LOY45_RS25535 5551613 .. 5551648 -  -5.4  -3.06133   GAAGCTTGGATTGAA    CGG-GTTCAGCAAAGGG TTT CCTCCTGTTGAACACCG    GCAGCGGACCACCGT  50 122
        betT 5549519 .. 5549542 - -13.2  -2.52543   ATCGCTGGCAAGCCA          GCTCCCACAA AACC CTGTGGGAGC           TGGCTTGCCAGCGAT  72 54
LOY45_RS25500 5543129 .. 5543156 - -14.8  -4.71418   AACAGGCAAAAGAAA        GCCCGCCCGGCA CAAA TGCGGGACGGGC         TCTGATTGCCGACTT 100 39
LOY45_RS25495 5542329 .. 5542345 - -13.7   -5.7946   GGGGGAATAAAAAAA              GGGCCGT AAA ACGGCCC              GAGTTCCCTGCTATG 100 49
        ssuE 5541451 .. 5541465 -    -7  -3.11281   CGACGCAAAATGACA               GTGCGC ATA GCGCTC               TCCTTTGCTGTTGGG  54 111
LOY45_RS25485 NONE
        ssuD NONE
        ssuC NONE
        ssuB NONE
LOY45_RS25465 5536977 .. 5537000 - -10.2  -3.01924   CAGCGGCGTTGAACA          CCTGGCACGA CCTG TCGCGCCTGG           TTGAGCAACGCATGC  62 462
        ompR 5531227 .. 5531252 - -11.1  -4.70659   CTGCACAGGCAAAAA         CAGGGCAACCC CGAA GGTCTGCCCTG          CTGGCGGTGAGCTAC 100 57
LOY45_RS25435 5529482 .. 5529504 -  -6.9  -3.38951   CCAGGAATACATCAA           GGAAGCCGG AGGCG CCGACATCC           GCTGCTTCGTGGTCG  55 363
LOY45_RS25420 5527473 .. 5527525 -  -3.9  -3.53012   GCGTTGTTCTCGAAA TGGATGAACGCCATGGGCTGGCAGC ACA ACAGCCCGTCGATGGTGTTCAGCGA CGCCATCCACCTGAG  51 416
        hslO 5526029 .. 5526046 -  -2.6  -2.93869   GATTATGCCAGAAAC             GCCCAA AAAAAG TAGGGC              CCTCCTGTCAGAACG  41 87
LOY45_RS25405 5524347 .. 5524362 - -11.8  -5.37593   CCGGAAAGCAAAAAA              CCGCCC ATGA GGGCGG               TTTTTTGTTTACGCG 100 50
LOY45_RS25400 5523553 .. 5523572 -    -7  -3.24411   AGGCGGTGAAACACA            GCCGCAAG CGCC CCAGCGGC             AGCACCACGATGCAG  54 245
        lysM 5516493 .. 5516519 -  -8.7  -2.82142   GGGATACCGAAGAAT        TCGCCGCGGTAG AGGA CTACCG-GGCGT         TGCTCGAAGGGTTGT  60 43
        nudE NONE
        cysQ 5514358 .. 5514384 - -10.2  -3.16881   CACCCAGGTCAGTAA        TGC-CGGCAGC AGCGAG GCTGCCGTGCA         GTTCAGCGGCCAGTA  63 45
LOY45_RS25310 5504181 .. 5504214 - -19.1  -4.75372   ATTAGCCAGTAAAAA     GCCGGTTAATCCGAT AACA ATCGAATTAACCGGC      TTTTGCTCAAGCGTT 100 39
        aguB NONE
        aguA 5502017 .. 5502034 - -12.7  -5.81412   TCCACGCAAAAAAAA             GCCCGTC AATC GACGGGC              TCTTTTCCTCCAGCG 100 43
LOY45_RS25295 5501616 .. 5501643 - -14.2  -4.77157   CCAAGCGACTAAAAA        GGGCGGCATTGT TCAG ACAATGTCGCCC         TTTTCATTCCTGCTG 100 50
LOY45_RS25285 5498423 .. 5498449 - -14.5  -4.45168   GTCTGAAAATAGAAA        GCCCGCCTGCGA GTGT TCGCA-GCGGGC         CTTTTTTTCTGGACT 100 129
LOY45_RS25280 5496979 .. 5497002 - -18.2  -4.65933   TACGCCGAAAAGAAA          CAACCCCGGC CTAG GCCGGGGTTG           CTGGAGTCGCCAAAC 100 46
LOY45_RS25265 NONE
LOY45_RS25260 5492094 .. 5492111 - -14.1  -2.80816   GCCGCAGCCAGTATA             CGGGCGC GCCT GCGCCCG              ATCAGGCGACCACTG  79 93
        tagH NONE
        tssJ NONE
        tssK NONE
LOY45_RS25175 NONE
        tssM 5465005 .. 5465016 -  -3.6   -3.4252   CGCCACCCATCACAA                CCGC TCCG GCAG                 GCTGAAGCCGCTGAG  50 8
        tagF NONE
LOY45_RS25160 NONE
LOY45_RS25155 NONE
LOY45_RS25150 NONE
LOY45_RS25145 NONE
LOY45_RS25140 5456964 .. 5456994 -  -8.9  -3.40597   CTCTCTATTTAAACA       CGCCCGGGACAAC CTCAT GTCGCCCCGGTCA       CTACGATGCTCGCTC  66 50
LOY45_RS25135 5455926 .. 5455980 - -15.1  -3.53012   CGGTCTTCCTTGAAA CGGCGCA-CAG-GTCGCCCGGCCTTGT AGC ACAAGGCCAGGCGACGCTGCTGTTCAG GCCTTACACGTTAGG  88 29
LOY45_RS25130 NONE
LOY45_RS25125 5454557 .. 5454573 -  -5.1  -2.70932   TCCCCCCTTCAACGA              CGTGC CTTGATT GCACG              AGCTTCGCCCCGTTG  46 2
LOY45_RS25120 5453999 .. 5454013 -  -4.2  -2.64099   GCCGGTGACGATAAT               GGTCAT GCC ATGTCC               CCCTTTGAGGGTGCA  43 87
        rfaD 5452887 .. 5452914 - -14.9  -3.73224   GTACGGGCGACCAAA        CCCGATCGCTG ATTTTG CAGCGACCGGG         GAAGCCTAACGTTCA  95 123
LOY45_RS25110 5452275 .. 5452312 -  -4.7  -3.82419   AAAAATGATCAACAA   CGCTCCTGGAC-GATGGG CTG CCGAGCAGCCCTGAAGCG   AGAAGACAAACCTCT  57 57
LOY45_RS25100 NONE
LOY45_RS25095 5449848 .. 5449896 - -12.9  -3.53224   GACTTGCGCTCTAAA CCGCGAGGCGTGCGGAAGTGGGC GAA GCCCGCTTTTGTGCGCCTTGCGG TTTGCGGAAACGCGA  79 209
LOY45_RS25090 5448475 .. 5448511 -    -3  -3.41414   AAACCATATGGACAA   CG-CCTCTATCAGCGCAG AGG CTTCGCTGA-AGTGGTCA   CTGCCGGGGCAGAAC  48 291
LOY45_RS25025 NONE
        mdtI 5439292 .. 5439312 - -11.2  -3.54543   AGCCATTTGCGCAAA            GACCAACG GCGGG CGTTGGTC            CGATGCAATGCGCAC  77 99
        gabP 5432849 .. 5432874 - -16.9   -5.4505   TGCTTGAACAAAAAA         GGCCGCGATCC TCAC AGATCGCGGCC          TTTGTCATTGCACCC 100 49
LOY45_RS24970 5429376 .. 5429402 - -11.7  -4.29325   CACTAATACCGAAAA        GCCCCAAGCGAA GTGA TTC-CTTGGGGC         TTTTTTCATGCCTGC  89 505
LOY45_RS24940 5423541 .. 5423587 -   -11  -3.53811   CCCATCGCTGGCAAA GCCAGCTCCCACAAGGGTC AGTGCATGAA GATC-TTGTGGGAGCCGGC CTTGCCGGCGATGGC  75 54
        hisB NONE
        hisH NONE
LOY45_RS24925 5421905 .. 5421945 -  -3.3  -3.55444   TGTCTATTCGGTAAA CAGT-GATGCTCGAAAAG TCAGTT CTTCTCGAGCGCCCACAG  GTCGCTTTCAATGCT  50 2
        hisA NONE
        hisF 5420153 .. 5420178 -  -5.4  -3.53012   GGCCTGGGCCGCAAA         CCGACCCTGG TCGATG CCAAAATCGG          CATGCGCGAAGCCCT  53 208
LOY45_RS24895 5415410 .. 5415421 -  -3.6  -4.41895   AAGGGTGAACGAAAA                CGGC GCAG GCCA                 CCTCAACGTTTCAAC  66 36
LOY45_RS24890 5413852 .. 5413889 - -17.7  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGATCGGC ATGC ACCGGACCTGTGGGAGC    TGGCTTGCCAGCGAT  86 56
LOY45_RS24860 5408509 .. 5408520 -  -7.2  -4.25458   AAGCGCAGCAAGAAA                GGCG AATT CGCC                 GGCGGCCCGACCACC  72 201
LOY45_RS24845 5406961 .. 5406975 -  -4.2  -4.08948   CAAGCCGAGAAACAA               CCGCAG CAT CTACAG               CTCCCAGGCAAAAGG  61 20
LOY45_RS24840 5405471 .. 5405483 -  -3.3  -3.10879   AGCAATGGCAACACA                GCGGT TCG ACCGG                AGATTTTGCTGCGCA  43 222
LOY45_RS24830 NONE
LOY45_RS24825 NONE
        dgcA 5400403 .. 5400416 -  -4.5  -4.11484   GGGAAGCTCCCAAAA               GACAC TTCA GTGCC                TTGCCAGGGGATCAC  61 164
        dgcB NONE
LOY45_RS24810 NONE
LOY45_RS24805 5396346 .. 5396376 - -21.2  -2.64099   TTTTTTGACCATAAC       GCCGAAGGGCACGC AAT GCGTGCCCTCCAGC       CATGCACAAACACTT 100 78
        gbcB 5392821 .. 5392868 -  -8.5  -3.53012   GCCTGGCGCTGGAAA CCATCACC-GG-TGCGGTCGCCG AAAT CAACGAGCGCAACCTGGTGATCG CCAGCGCGGCCGAAG  62 231
LOY45_RS24785 NONE
LOY45_RS24780 5390553 .. 5390585 -  -7.6  -3.84825   CTGATCCACAGCAAA     GCCGGCCCACCCTCC CGAA GGT-GGTGAGCTGGC      AAAAGGATGTAGCGG  67 55
LOY45_RS24775 5388022 .. 5388032 -  -2.4  -3.71848   TGGCGGCACCAAGAA                 CGGC ATG GCGG                 TGGGCGAGGCGATCC  53 523
LOY45_RS24765 NONE
LOY45_RS24760 NONE
LOY45_RS24755 NONE
LOY45_RS24750 5381177 .. 5381235 - -10.9  -3.05384   TTGCCGGCGATGCAA GGCG-CAGCCTTGCCAAAATCGGGGCCGC TAC GCG-CCCCATCGCCGGCAAGGCCGGCTCC CACAGGTCATCTGGC  68 52
LOY45_RS24745 NONE
        purU 5379542 .. 5379579 - -15.6  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTCCGG TGTATG CAGTACCTGTGGGAGC    GGGCTTGCCCCGCGA  81 50
        fdhA 5378163 .. 5378221 - -20.6  -3.53012   GGTTTGGCTGTGAAA CCCAATCGCGGGGCAAGCCCGCTCCCACAG GTA CAGTGGGAGCGGGCTTGCCCCGCGAT---- GTTTTTAGGCGGCGC 100 30
LOY45_RS24725 5376852 .. 5376880 -    -8  -4.07885   CACTTCCTTGTAAAA        CGGGGCGGGACA TATAG CACACCGCCCCG        CCCGAGCAAATACCT  73 44
LOY45_RS24720 NONE
LOY45_RS24715 NONE
LOY45_RS24710 5374354 .. 5374376 -  -6.9  -3.44051   TGGTGACTACGAGAA           CGACCCGGC CTTGC GCCAGACCG           TGCAGGACTGGGTCA  57 100
LOY45_RS24700 5372817 .. 5372850 - -15.4  -2.52543   ATCGCTGGCAAGCCA     GCTCCCACAAGGTC TACACC AACCCTGTGGGAGC      TGGCTTGCCAGCGAT  80 54
        creB NONE
        creC 5370572 .. 5370582 -  -2.4  -2.68071   CGCAAGCGAAATGGA                 GCCC TTG GGGA                 GTTATGTGGAGCCTG  38 62
        creD NONE
LOY45_RS24680 5368398 .. 5368445 -  -5.6  -3.72576   TGGTGTTGCACGAAA CCGG-GC-AGACCGACCGCGTG GCCCTG CACGCCGTCAACCTCACTCCGG TCAACCCGGTAGCCG  60 524
        glnE 5356760 .. 5356773 -  -3.1  -3.55761   CAGGGAGGCTGCAAA               CTGTC CGCA AACAG                CCTGGCCTCCCCTCT  50 135
        waaF NONE
        waaC 5354612 .. 5354622 -  -5.4   -2.8763   ATAGAACAAAAGCCA                 GTTG CAT CAAC                 GAACATCCTCAGCCA  47 21
LOY45_RS24635 NONE
        rfaP NONE
LOY45_RS24625 5351956 .. 5351978 -  -2.6  -2.75825   CTGGCAAGAAAGTCA           GTCATTCGCG TCC CTCGAAAAAC           GTCACCACATGGCGA  39 4
LOY45_RS24620 NONE
LOY45_RS24615 5349736 .. 5349755 -   -15  -3.25823   TTGGCTCGATAGCAA            TCGCGGGG CAAG CCCCGCGA             TGCGGCTCTATCAGT  86 36
LOY45_RS24575 5340720 .. 5340738 -  -6.6  -3.79906   GGACTTCGACAACAA             CATCGCCT TCC AGGCGGCG             GTCGAACTGGTCGTC  62 234
LOY45_RS24565 5337625 .. 5337660 -  -9.8  -4.11869   CAAAAAACGTACAAA    GCCA-TGCAGGCCAC GCAATTA GTGGCCTGCAGCGAC    ATCTCCCAAGGTTAT  79 72
        bioB 5330825 .. 5330848 -  -5.1   -4.4261   GCGCGAAGATCAAAA          GCCATGGCC GCCTCA GGCCGAGGC           GGCGTTGTAGAACAG  70 14
        bioF NONE
LOY45_RS24525 NONE
        bioC NONE
        bioD 5327407 .. 5327417 -  -6.8  -2.71785   GTTGAAAACACTAAT                 GGCA CTT TGCC                 TTATGATAGACCAGT  50 42
LOY45_RS24510 5326934 .. 5326950 -  -3.6  -4.07687   ATTGCCTTGGCAAAA              TGCCCG GCAAA CGCGCA              GCCGAACGCCGGCCA  60 105
LOY45_RS24505 5324901 .. 5324944 - -19.9   -4.4773   CCACAGGAAGCAAAA GCAAAAAAAAACGCCTGCC GGTGAG GGCAGGCGTTTTTTCTTAC AGCCTTTGACTTAGT 100 36
LOY45_RS24500 5323358 .. 5323368 -  -3.2  -2.84051   TCACTGTTATGAAAC                 CAGT GTA ACCG                 AACAACTTTTGTGAC  41 78
LOY45_RS24495 5321315 .. 5321330 - -11.8  -5.10933   GCAGGCAAAAGAAAA              CCCCGC CGAA GCGGGG               CTTTGCAGACTGTTT 100 215
LOY45_RS24485 NONE
LOY45_RS24480 5318206 .. 5318237 - -10.1  -5.74122   CAGCAGACAAAAAAA      CGCCCCAAGCC AAAAACAACA GGCCCGGGGCG       ATGCGCAGGAACGCG 100 77
LOY45_RS24475 5317918 .. 5317952 -  -6.2  -3.15999   CTCCCACAGAGTCAA     TCCTGTGGGAGCGGCG GTG CGGCGCCCCGACTTGA     CCCGCGATTGGCCTC  52 39
LOY45_RS24415 5304924 .. 5304940 -  -6.5  -3.53224   CATTCTGCGGCGAAA              GGACCAG GAA CTTGTCC              GTAACCACACCTTCC  57 363
LOY45_RS24405 5303551 .. 5303587 -    -3  -3.16742   TCGAACCCTGAGCAA   TGAATGT-GCCGTGGCA TCCG TGCCACGCTTACCTTCA    CCACTTTAGTCCGTT  43 44
LOY45_RS24400 5303339 .. 5303354 - -11.8  -5.68438   CCACCAAACAAAAAA              CCGCGC CTTT GCGCGG               TTTTTTTTTTGCCTG 100 53
        tsaD 5293376 .. 5293393 -  -2.6  -3.63515   CTCGACCTGCAACAA             CAGGCC TGGATC GGCGTG              TGCGCAGTGATTGGC  50 367
        folB NONE
        folK 5292153 .. 5292191 - -12.4  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGGCCTG CCTACAC CGGACCTTGTGGGAGC   TGGCTTGCCAGCGAT  70 45
LOY45_RS24295 NONE
LOY45_RS24290 NONE
LOY45_RS24285 5275405 .. 5275438 -   -11  -3.01712   CCGTGCCGGGCAACA     GCGCAGCGGAACAG GAACAA CTGTTCCGCCGCAT      CCGTGGCTGGCTGAG  65 56
LOY45_RS24275 NONE
LOY45_RS24270 5271211 .. 5271229 -  -7.4  -3.28712   GGCGTTTTTGGATAA             GCGCTGAA AAC TTCATCGC             TACAACCATCGCTAT  59 140
LOY45_RS24265 NONE
LOY45_RS24260 5268826 .. 5268852 - -15.1  -3.81022   AAATCTTGAGAACAA         GGAGCGCCGGC GGCAA GCCGACGCCCC         ATCAGCGGCCCTTAC  95 37
LOY45_RS24255 5267547 .. 5267564 -  -2.6  -2.66395   ACTCAGCATGACAAC             GCTCCT CAGCTC AGGCGC              AGGCGGCTGGCGCCG  38 13
LOY45_RS24250 5266619 .. 5266631 -  -3.3  -3.65902   TGTACCTCAGGGAAA                CAGTC TAG GGCTG                ACCGGTATCAAGGCG  50 107
         rpe NONE
LOY45_RS24240 5265053 .. 5265070 -  -8.3  -2.75712   TCAGGCAGGCAAGCA             GGCCGGC ATGT GCCGGCA              GATGGCAGTCAGGCG  57 34
        trpE 5263491 .. 5263519 - -16.7  -2.60244   GTTCTAAGGAAGGGA        TACGGCGCCTGCC ACA AGCAGGCGCCGTG        GATCAGGCTCAGCTA  85 34
LOY45_RS24225 NONE
        trpD NONE
        trpC 5258643 .. 5258657 - -12.8   -5.4251   TGTAGAGACAAAAAA               GCCGGC ATC GCCGGC               TTCAGAGTTGAATCA 100 38
LOY45_RS24210 5257526 .. 5257539 -  -3.1  -3.71848   GCCGGGCAGGAACAA               CA-GCG CAG CGCCTG               GGTCCGGGCCAAAAG  54 398
LOY45_RS24200 5256222 .. 5256234 -  -4.7  -3.53012   TTCGCTTGTTGCAAA                GCCTG GGT CTGGC                GCTGGTGGCCTACCT  53 447
        argC 5250052 .. 5250066 -  -7.1  -3.41878   GGCTGCAAGCTATAA               GCGGA TCGCG TCCGC               CTTTGACTTGCAGCT  58 54
        erpA 5249545 .. 5249564 - -16.4  -4.39166   CCGCAGATAGCAAAA            CGCCGCGC ATCG GCGCGGCG             TTTGCGGTACTGCCC 100 47
        tyrS 5245550 .. 5245575 - -16.1  -4.85782   TTGCTGAAAAACAAA         GCGGGGAGGCC TGCC GGCCTCCCCGT          CTATATATAGCTACA 100 52
LOY45_RS24130 5243451 .. 5243467 -  -3.7  -3.32844   TGTGGGAGCTCATAA              GACAG CTGATGT CTGTC              GATTAAGGAGGTGAT  48 29
LOY45_RS24125 NONE
LOY45_RS24120 5243170 .. 5243210 - -10.7  -4.60889   AACGATTCTGAAAAA  GTTCAGAAATCAATATTCG AGC CGAATATTCATTTCTAAGC  TTTGACGTAAGGTGG  93 38
LOY45_RS24115 5239975 .. 5239988 -  -5.3  -4.15222   ATGGTCGTCAAGAAA               TTCTG TTGC CAGAA                GGTCTTGTTAGACAC  64 155
         rrf 5239812 .. 5239847 - -19.2  -3.56864   AAAATGCCAGAAAGA    CAAAACCCCTACCTGC ATAC GCAGATAGGGGTTTCG     GAATTTAATCTTGAC 100 34
        birA NONE
LOY45_RS24100 NONE
LOY45_RS24095 NONE
LOY45_RS24090 NONE
LOY45_RS24085 NONE
LOY45_RS24080 5237100 .. 5237121 - -11.7  -4.73614   GACCATTAAAACAAA           GGCAGATAT TTTC ATATCTGCC            TTAGTTATATGGAGC 100 35
         tuf 5235802 .. 5235838 -  -5.9  -4.19817   GCTACTGACCTAAAA   GCT-TATCAGGCCGAC CATTAT GTCGGCCTGATCGAGA    GAAATCAACTACTTA  69 38
LOY45_RS24070 5235701 .. 5235725 - -10.7  -4.64861   TCCTGTGAAAAGAAA          GCCAGACACAC GAG GTGAATCTGGC          AGGTCAGGAGGGAAT  93 22
        secE 5235288 .. 5235317 -  -2.1  -3.23711   TGCACAACGTACCAA       CGCTTAGCCACGGG ACA CCCTTAGCCAA-CA       ATCAAGGAAATCAAC  44 16
        nusG 5234721 .. 5234745 - -17.1   -4.4767   CCAGTGACGACAAAA          CCCCGCAGCAC ATA GGGCTGCGGGG          TATGGGATGCTTTGT 100 45
        rplK NONE
        rplA NONE
        rplJ NONE
        rplL 5232305 .. 5232328 -   -16   -4.8143   CCAATAACGGAAAAA          GGCCGGTGGC AAGA GCCACCAGCC           ATCAGCCTTTCGCTT 100 71
        rpoB NONE
        rpoC 5223661 .. 5223683 - -10.6  -5.17786   CAAGAAAAGCAAAAA           TTGGCAGGAC GGA GTCCCACCAA           ATTTAGGGGTACAAG 100 159
        rpsL 5223228 .. 5223246 -  -5.9  -3.56594   GCAAACTGCTGCAAA             CGGCCGA TTACT TCGGACG             CTTGGTACCGTACTT  58 14
        rpsG NONE
        fusA 5220459 .. 5220471 -  -4.8  -2.71791   ACCTCTTGCCTAAAG                GGCT GGATT AGCC                TTGTTTTTTAACGAG  43 20
         tuf 5219204 .. 5219222 - -17.4   -5.5074   CAACCCAATAAAAAA             GCCCCCGC TGA GCGGGGGC             CTTTTTAAGCGATCA 100 45
        rpsJ 5218775 .. 5218791 -  -9.5  -2.63301   CAGAGCGTTACACGA              CTAAGAC CGT GTCTTAG              CCGAGGCTGATCTGC  62 22
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 5212412 .. 5212441 - -20.9  -3.87373   GACAGTTCCCAGAAA       CGAAACAAGCCCC AGAA GGGGCTTGTTTCG        TTGCAAGGTCACCGG 100 87
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY 5208544 .. 5208561 -  -4.1  -2.73542   CTTAAGGGTCAATCA             GCGCAGCA GAC CGCTGC-C             ACCGTAGCCTTTCAG  43 5
        rpmJ 5208349 .. 5208381 - -12.9  -4.38748   TGTAGAAACAAATAA     TC-AACCCAGCAGC GCACTA GCTGCTGGGTTTGA      AGCGCAGATCACAAT  95 40
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA NONE
        rplQ 5205358 .. 5205374 - -10.8   -5.4251   TGCAGACACAAAAAA              CCGGGC ACTAG GCCCGG              CTTCTTGTTACAGAC 100 49
LOY45_RS23865 5203739 .. 5203756 -  -9.8  -4.67755   ATATTCATTGAAAAA             CCGCCC AAATGA GGGCGG              TTCTTCTTATCACTT  87 45
         bfr 5203120 .. 5203137 - -14.1  -5.24796   CCCAGATAACAAAAA             GCCCCGC ACTG GCGGGGC              TTTTTTTGATCGGGA 100 44
LOY45_RS23850 NONE
LOY45_RS23845 5198082 .. 5198100 - -17.4  -4.13654   CCCTGAAATGACAAA             GCCCCCGC AAT GCGGGGGC             TTTCAGAAGAAACTT 100 64
LOY45_RS23840 NONE
LOY45_RS23835 NONE
LOY45_RS23830 5193380 .. 5193390 -  -4.6  -3.53343   AATTTCTCGTCCAAA                 CCGC TTG GCGA                 TTCATCCGCTGGAAT  52 59
LOY45_RS23825 5192086 .. 5192115 - -15.8  -2.92667   GCAAGCGTGAAAGGA       TGCGAGGGTGGC GTGACA ACCACCCTCGCA        TTGCTTTTGAAACTA  83 129
        fdnG NONE
        fdxH NONE
LOY45_RS23805 NONE
        fdhE 5179555 .. 5179569 -  -2.8  -2.82834   GATGGCATCACTACA               GTCC TGGCGAT GGAC               CGCAGCGTCTGCATC  41 104
        selA NONE
        selB NONE
LOY45_RS23785 5175862 .. 5175874 -  -3.3  -3.30243   AGCCAGTGCCCAGAA                GGTGC GGT GCACT                TCGATACTTATGCGG  47 203
LOY45_RS23770 5172378 .. 5172426 -  -2.2  -3.62597   CCGATCCCCGAAGAA GTCAC-CCAGGCCCTGCTGCGCGC AGT GCCGGC-GCCGCACCTGGAGTGCC TGCTACTGACCGATT  50 136
LOY45_RS23750 NONE
LOY45_RS23745 5167666 .. 5167718 - -42.4  -4.32857   TCGTTTAAACACAAA TCGCGGGGCAAGCCCGCTCCTACA GCACT TGTAGGAGCGGGCTTGCCCCGCGA TGCATTTCAGCGCCC 100 32
LOY45_RS23715 5163178 .. 5163236 - -24.9  -3.05384   CTGCCTTGTATTGAA TTGATCGCGGGGCAAGCCCGCTCCTGC CGATCTT GTAGGAGCGGGCTTGCCCCGCGAT-A- CCCTCATCACCCCAC 100 32
        nrdR NONE
        ribD 5159437 .. 5159456 -   -10  -2.52623   CCTCCTCGAGAACAG            GGCT-GCGC GTG GCGCTAGCC            GCAAATTATACGCCG  62 31
LOY45_RS23685 NONE
       ribBA 5157572 .. 5157595 -  -9.5  -2.62613   TCTCATCTTAAAGAG          CCAGGCCGC AAACGG GCGGCCTGT           GGGGGTTTGGGACAC  62 68
        ribE NONE
        nusB 5156566 .. 5156581 -  -8.2  -2.88663   ACCCATTGGCACATA              GCGCCG CAAT CAGCGC               TTGAACGCCTTGACT  57 19
        thiL NONE
LOY45_RS23660 NONE
LOY45_RS23655 5154203 .. 5154216 -  -2.3  -5.08088   AAGCGGCAACAAAAA               CGACG GGCA CGTTG                TGCTCCTGATCAGTA  75 135
        ribA 5153576 .. 5153611 -  -3.8  -2.62983   GCCAGCTCCAGACGA    CGGCGAACCTGGGCGCG GGT CACGCCC-GACCGGCCT    CGCCCTGGTGCTCGT  42 9
LOY45_RS23645 5153172 .. 5153185 -  -5.2  -3.14294   AACAGCCACAGGTAA               CGGC GCATCA GCCG                AGCTGGCGAGGGATA  50 19
LOY45_RS23640 5151992 .. 5152004 -  -9.1  -2.52543   ACGGCTTCGAAGCCA                GCCTG CAT CAGGC                GTGGTTCGGCTGGCA  55 391
LOY45_RS23615 NONE
LOY45_RS23610 NONE
LOY45_RS23605 5143085 .. 5143097 -    -2  -3.90316   AGCGCCTGAAAAATA                TTCT GTTCG AGAA                AATTTACAGCCCTGC  54 219
LOY45_RS23585 NONE
LOY45_RS23580 NONE
LOY45_RS23575 5135525 .. 5135548 -  -9.6  -3.28924   GAGTCCTTTCGACAA          GGAAGGCACGC CAG GCGCG-CTTCC          TATGAATAACGCCGC  68 25
LOY45_RS23570 5134106 .. 5134135 -  -3.5  -3.86897   TTCACCCTGCAGAAA       CTTCACGGCCATCG TTA CGACGGCC-TGACC       ATGGTGTGTTACACC  56 360
LOY45_RS23560 5132351 .. 5132364 -  -8.1  -3.72742   CTATTACGAACACAA               CCTGC GCCC GCAGG                AGAAACTGCATACGC  65 269
LOY45_RS23545 5130552 .. 5130565 -  -3.1   -2.7185   ATCATCGGTTAAGTA               CGC-AG CCG CTCGCG               CGCCAGTCACTGACT  40 71
        amrS NONE
LOY45_RS23535 5127851 .. 5127873 - -11.3  -5.40072   GCTCCTGTAAAAAAA           CAACGGGCC ACCTG AGCCCGTTG           TTCAATTGCCGACAC 100 50
LOY45_RS23530 5126491 .. 5126523 -  -4.7  -3.53224   GATGTCCGGCGCAAA      GCTGCGACTGATCAA CTA CTGCTCAGGCACCGC      GATCAGCCTGCTCGG  53 15
LOY45_RS23515 NONE
LOY45_RS23510 5123766 .. 5123810 -   -21  -3.39471   ACAAAGGCTAAGCAA CCCT-CAACAAAAAGCCCCGC AAAT GCGGGGCTTTTTGTTTCAGGG CAAGAACACCCCATC 100 74
LOY45_RS23465 NONE
         mpl NONE
        ubiX NONE
LOY45_RS23450 5110581 .. 5110601 - -11.1  -3.53012   GTCGCCTTCGGCAAA            CGCGCCC GGGAGAT GGGCGCG            CGGCATTTGCTGGTG  72 451
LOY45_RS23430 NONE
LOY45_RS23425 5106755 .. 5106771 -    -5   -3.3482   CAACTCCTCAAGCAA              CCAGGC TAACC GCCAGG              GGCAGGAACACCGCC  52 1
LOY45_RS23420 5105858 .. 5105875 -  -2.5  -3.28712   GCCGGGCGCGGACAA             CCGCCGC GCAT GCGCCTG              ACCTGGATCCTGCTG  44 297
LOY45_RS23405 5102655 .. 5102683 -  -5.8  -3.56643   GCGACAGCGTCGAAA        CGTGGGCGGGCG GTTTG CGCTCGGCCAAG        TCAGAGCGACTCCTG  58 26
        nadD 5101976 .. 5101998 -  -8.5  -2.77791   TTCAACTCAATAGTA          TGA-GGCGCT TTTC AGCGCCCTCA           GTTCGGCGCACGGTA  57 23
        rsfS NONE
        rlmH NONE
        mrdA NONE
        rodA NONE
        mltB NONE
LOY45_RS23370 5095907 .. 5095925 - -10.3  -4.11216   GCCTGACGGGCAAAA             CCGCCAT TGTAC ATGGCGG             CTGCGCCCGGCTGCA  81 65
LOY45_RS23365 5094629 .. 5094654 - -14.7   -3.9461   CCGTGGCAACAACAA         CGCCCCCGC GTGAGTGG GCGGGGGCG          TGGCAGGTCACGATA  95 41
LOY45_RS23360 NONE
        lipB NONE
        lipA 5092622 .. 5092652 - -13.4  -5.27335   TGCCGCAAACAAAAA      TGCCGATGC-CGC AGGGTA GCGGGCATCGGCA       TTGAGGCACGGCGGC 100 46
LOY45_RS23345 5091322 .. 5091353 -  -6.5  -2.71011   ATCCTGGCCCAAGGA      CGACTTGC-CGCTG AGCCG CAGCGAGCGGGTCG      AATTGCAGACCCTGC  48 193
LOY45_RS23315 5084845 .. 5084881 - -15.9  -3.05844   GTGCGCAGCCTAAGA    CGATCGGCACCTGGCAA CAA TAGCCAGGTGTCGATCA    GAGAAGTTATTGACT  85 81
LOY45_RS23310 NONE
LOY45_RS23280 5077995 .. 5078009 -  -7.8  -3.15663   AGCTACTTCGAGCAA               GCCTCG CTG CAAGGC               CACGCCGAGGCTCAA  55 299
LOY45_RS23255 5072539 .. 5072552 -  -2.3  -4.94992   TCAAAGTGACAAAAA               CGCCT AACT AGCCG                TGATTTAGCCCTGGC  72 19
LOY45_RS23250 5070800 .. 5070820 -  -4.6  -3.53563   ATATCCGGCGGCAAA           GGCACGCAC GTTA GAGCG-GCC            AGTTCGGGGTCGAGC  52 15
         amn 5069173 .. 5069220 -   -12  -3.27923   GTTGAACAGGATCAA CCGCGGCTCGGCCGGCGGCGCCT TGGGC AGGCGACGCGGGCCG-GC-G-GG TTTGGCCGCGGGACG  77 77
LOY45_RS23240 5068237 .. 5068251 -  -5.6  -3.62572   GACTATCAGTTGAAA               GTCGTG GTG CCCGAC               ATGGACCATTACCAG  57 410
LOY45_RS23225 5066409 .. 5066426 -  -3.4  -3.79113   AGCGCCTTACAACAA             CGATAG TGGTAG CCATCG              AGGGCACCGCCAGAT  54 343
        hrpB 5061095 .. 5061119 - -14.3  -3.08996   TAGCGGTACTCAACA          CCCGCCTCG CCCCCTT CGAGGCGGG          CAGCGATATCCAGCG  76 441
LOY45_RS23190 NONE
LOY45_RS23185 NONE
LOY45_RS23180 5057341 .. 5057352 -  -5.8  -4.38712   TCGACCTGGAGAAAA                TCGG CCTG CCGA                 TCCAGTGCGTGATCG  73 294
        yedA NONE
LOY45_RS23165 NONE
LOY45_RS23160 5053483 .. 5053499 -  -7.3  -3.14881   GAAGCGCTGGATGAA              CGCTTGA TGC TCAAGCA              GATGCCCGGCGTGTT  55 247
LOY45_RS23145 5050572 .. 5050586 -  -2.1  -3.17392   GATTCTCCAAGGCAA              TGC-GC AACT GCTGCA               AATAATACAGGGTTT  42 69
        tesB NONE
LOY45_RS23135 5048799 .. 5048813 -  -6.4  -3.42503   CGGCAAGATCTACAA               TCGCTC GGT GAACGA               CTACACCTTCATCAA  55 305
LOY45_RS23115 5043533 .. 5043547 -  -7.8  -3.62522   CAACGTGGCCAACAA               CCCCAA CGC CTGGGG               CGAATGGTTTTCCCA  63 309
LOY45_RS23105 5039529 .. 5039571 -  -9.9   -2.7186   AAAGGTGCCGAAGCA GGGGC-TGCCGAGGGC TATCTGCACCAC GCCTTCGGCATGCCCC GCCTGCTGTTTATGT  56 212
LOY45_RS23065 5030592 .. 5030605 -  -4.5  -3.98291   AACAAGGGCAAAGAA               GACTG ATTC CAGCC                TGAAGCGCCTTTATC  59 86
LOY45_RS23055 NONE
LOY45_RS23050 5029173 .. 5029190 - -12.7  -5.37043   AGCGCACACAAAAAA             GCCCGGA CCAG TCCGGGC              TTTTTTATTGCCTGC 100 44
         fur 5028069 .. 5028101 -   -15  -3.95555   ACAATCAGGCAGAAA     GCAC-GAAGGCGACC CCAG GGTCGCCTTCAGTAC      TTATGCAGCAATGTA  95 49
        grpE NONE
        dnaK 5023469 .. 5023499 - -14.7  -2.89564   CGGGTATTGCAGACA      CGCCAACGCGGGAG CAAG CCCCCGCGC-GGCG       ACATCCTACCAGCCA  80 81
        dnaJ NONE
        dapB 5021118 .. 5021147 - -12.9  -5.02074   GCAGGTTGCAAAAAA       GCGGAATGACGTA TAGA CACGTCACCCCGC        TTTCTTCGTCGAATT 100 281
        carA NONE
        carB NONE
        greA 5016100 .. 5016128 - -17.3  -2.62616   TCAGTTGCCAGATCA        CCGGGGCCGCGGC AAA GCCGCGGCGACGG        TCAAATGTGGGCGAC  86 26
LOY45_RS22995 5015365 .. 5015381 -  -2.2  -3.49475   GCCATTTTTACAGAA              TCAGAC AAAGG GTCAGA              TTATGCCGCTCAATA  46 349
        rlmE 5014531 .. 5014546 -  -5.4  -3.56161   TAACTTACTACATAA              CCTACA CATC TGCAGG               CGCCGTCTGTAACCC  56 139
        ftsH NONE
        folP NONE
        glmM NONE
        tpiA NONE
        secG NONE
LOY45_RS22955 5008975 .. 5008990 - -11.8  -4.33417   TCCACCTACAAGAAA              GCCCGC TGTA GCGGGC               TGTCTTGTTTCAATT  90 40
LOY45_RS22950 5008737 .. 5008751 -  -7.8  -5.65927   TATGCAAATAAAAAA               TGGGCA AAG CGCCCA               TCCCTGATACGCCGT  95 105
        rimP 5008209 .. 5008236 -  -6.2  -2.52464   GCCTTTCGCAAGCCA        TTGGATCCGCGCG GTC CGCG-GGATCCGG        CACGTCTCAGTCAAA  48 32
        nusA 5006705 .. 5006724 -  -5.6  -2.70932   GGCCGCGCCTAATTA            CTCGAACC AGTG GGCTCGGG             CGGCCATGATCAACT  46 3
        infB 5004074 .. 5004103 - -18.5  -3.65084   AACTAAAGCGGCAAA       CGCCCGGCCAGGC TAGA GCCGGACCGGGCG        TTGCGTTCAGAGCCG 100 89
        rbfA NONE
        truB 5002589 .. 5002610 - -10.2  -2.70525   CTTCTCCAAATCAAG           GGAAACCG AACAAA CGGTTTCC            AATAGGCCAGGGACT  64 138
        rpsO 5002149 .. 5002206 - -12.5  -3.16774   CCAGATAAAACTAGA GGTTGGAAGCCTGCCCTGCCCTTGCGG TAAA CCGCTCAGGCGAGACAGACAGCCAACC TCATAGATACGCAAG  75 119
         pnp 4999909 .. 4999924 - -10.4  -5.64274   GCAGGCACAAAAAAA              GGACCC CGAG GGGTCC               TTCTTCTTAAGCTGC 100 45
LOY45_RS22910 4999243 .. 4999271 - -14.6  -4.57341   AACCGCCCCCAAAAA        GAAGCCCCGGCA ACCAG TGCCGGGGCTTT        GAGTGACCAAGTCCT 100 89
LOY45_RS22830 NONE
        sfsA 4976207 .. 4976247 -  -9.1  -3.15544   TGCGAGGGCGAGCAA CTGACTGCCCTGGACTGCC GCGAA GACAG-CCAGGGCA-TCTG GTTTATCGACTGAGC  63 28
LOY45_RS22815 4974881 .. 4974895 -  -4.2  -2.65264   CCAGCAGGCACAGCA               GCGTCA GGG TGACGA               ACAGCGTGCGCGGTT  43 53
LOY45_RS22810 NONE
LOY45_RS22805 NONE
LOY45_RS22800 4971785 .. 4971795 -    -4  -4.63527   CCAGCATCTGAAAAA                 TCTT GGC AAGA                 CTTCTGCGCAGTGGC  75 440
        mrcB NONE
LOY45_RS22775 NONE
LOY45_RS22770 4965984 .. 4966002 - -13.2   -5.4659   CAATACAAACAAAAA             GAGCCACA ATC TGTGGCTC             CAAGGGTGAAAAGAG 100 47
LOY45_RS22765 NONE
        ilvN NONE
        ilvC 4962278 .. 4962293 - -11.8  -5.37593   GCCTAAACGAAAAAA              CGCGGC CGAA GCCGCG               TTTTCATCGCATCAG 100 48
        pssA 4961310 .. 4961321 -  -4.4  -2.94144   GCCCGAGCGAAATTA                CATC ACTC GATG                 TTTTTGCGCCGACGC  46 16
        msrP NONE
        msrQ 4959131 .. 4959145 -  -2.8  -2.75708   GGTTTTGAAAAAACC               CTAAAC TTG GCTCAG               CAATCTCAAATGACT  41 495
LOY45_RS22735 4957548 .. 4957564 -  -3.7  -3.32844   TGTGGGAGCTCATAA              GACAG CTGATGT CTGTC              GATTAAGGAGGTGAT  48 29
LOY45_RS22730 NONE
LOY45_RS22725 4957267 .. 4957307 - -10.7  -4.60889   AACGATTCTGAAAAA  GTTCAGAAATCAATATTCG AGC CGAATATTCATTTCTAAGC  TTTGACGTAAGGTGG  93 38
LOY45_RS22720 4954072 .. 4954085 -  -5.3  -4.15222   ATGGTCGTCAAGAAA               TTCTG TTGC CAGAA                GGTCTTGTTAGACAC  64 155
         rrf 4953909 .. 4953944 - -19.2  -3.56864   AAAATGCCAGAAAGA    CAAAACCCCTACCTGC ATAC GCAGATAGGGGTTTCG     GAATTTAATCTTGAC 100 34
LOY45_RS22710 4953092 .. 4953103 -  -2.2  -2.53012   AATGCCAGCATCAAT                CGCA CGCA TGCA                 GGTCTTCCCCCGATA  38 9
LOY45_RS22705 NONE
LOY45_RS22700 4949994 .. 4950009 - -10.4  -4.56775   ATGCTTGTTGAAAAA              CCGACC CTAG GGTCGG               TTTTTTATTGCCTGT  93 200
        murJ 4947881 .. 4947901 -  -4.6  -4.14392   GTGGAATGTGTAAAA            CCGACGTC TGACC GTCGTCAG            GCCTTAATGCAACGC  61 29
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB 4943075 .. 4943086 -  -3.6  -3.53224   GACTCCTGGCTCAAA                GGGC CTTG ACCC                 CGAGGATTTCCACCT  50 9
        ispH 4942049 .. 4942065 - -10.1  -2.88544   TGGTACTGGCACACA              CAGGCCG GGT CAGCCTG              CGCGAGGAGCCCGGC  60 68
LOY45_RS22655 NONE
LOY45_RS22650 NONE
LOY45_RS22645 4940138 .. 4940149 -  -4.4  -3.06831   CGAACTCCTAGTGAA                TCTG CCGC CAGA                 GGATGCGCCTGGGTT  47 6
LOY45_RS22640 NONE
        thiO 4938173 .. 4938190 - -12.7  -4.45168   CGTGTAAAAGATAAA             GGGAGGC CAAG GCCTCCC              TTTTTTCATGCCTGA  95 415
        rluD NONE
        pgeF NONE
        clpB 4932551 .. 4932569 - -14.6  -5.67283   AATGCAAAGAAAAAA             GGCCTCGA AAT TCGAGGCC             TTAGCGTAACCCGCC 100 47
LOY45_RS22605 NONE
LOY45_RS22600 4932114 .. 4932130 -  -5.1  -3.10409   TACCAACTGAGCTAA              CGACC CAAAAAT GGTCG              GGGTAAGGGGATTCG  50 20
LOY45_RS22595 4931956 .. 4931973 -  -6.2  -5.75342   CCCCGGTAAAAAAAA             GGCACC GATTAA GGCGCC              TTTTTTATGGCTGGC 100 96
LOY45_RS22590 4931826 .. 4931863 - -16.5  -3.86897   GGCAGGCCGCAGAAA   CGAAAAAAGGGCACCTT TTGC AAGGTGCCCTTCTTTCT    GAATATGGTCGGGGT 100 31
LOY45_RS22585 4930838 .. 4930849 -  -3.6  -3.17075   GCGTCTGGAAGGCAA                GCCG TTGC CGAC                 GTATGCGTACCGGGA  43 418
LOY45_RS22565 4928156 .. 4928168 -  -4.8  -2.74488   TAATGAGCTGAACTA                CACC TCGGG GGTG                GCCTGATCAGCCTCG  44 10
LOY45_RS22560 NONE
LOY45_RS22555 4925729 .. 4925760 - -10.8  -3.40403   GTCCGGCCAGTACAA      GCGCACCGACCGCC TGCT GGTGATCGATGCAC       CGCAGGAGTTGCAAG  67 436
LOY45_RS22530 4922607 .. 4922626 -  -3.6   -3.6502   GATCGCTTACGCAAA            TCACTGTT TATT AACAGCAA             TTGCGCCGGTTTCAG  52 37
LOY45_RS22525 4922428 .. 4922443 - -11.8  -5.32944   GCCATAACGAAAAAA              CCCGCC AGAA GGCGGG               TTTTACGGGGGTTCC 100 74
LOY45_RS22520 4920923 .. 4920967 - -31.7  -2.62616   TGATTTTTCAGATGA GGTCCATCCAAACAGGGCGGC TTT GCAGCCCTGTTTGGATGGACC CGTATGGAAAGCGGA 100 66
LOY45_RS22515 NONE
LOY45_RS22510 4918664 .. 4918678 -  -2.1  -3.78775   CTTGGCAGTACGAAA               TCACT TACTT AGCGA               CTGGGGTAATTTCTC  53 194
LOY45_RS22480 4910982 .. 4910996 -    -7  -4.18494   GAGCCGTACTGAAAA               CGCCAG TGT CGGGCG               TGCTCTGCGACCGTT  68 350
LOY45_RS22460 4908768 .. 4908781 -  -3.7  -3.79519   AACGTCATCATCAAA               CGCTC GAAA GTGCG                TGAGATGTTTGCCTT  56 401
LOY45_RS22450 4907286 .. 4907316 -  -9.1  -3.01712   CGGGCGTGCGCAACA      GCCCGGAGC-ATCTG CCG CAGATTGC-CCAGGC      GCTGGCTGGGATCAT  59 125
        ptsP 4901343 .. 4901356 -  -2.3  -3.14344   TATCTTGGCCATCAA               CGGGT CTCC ACCAG                TGCCCGCACTGCGCC  42 8
        pfkB NONE
LOY45_RS22425 4898301 .. 4898332 -  -4.6  -3.84906   ATAATTTATAAAATA      TCGTTTACTTTCAA TGAC TTGAAATTAAATGA       ACTTATGACTTCCAC  57 352
LOY45_RS22415 4897455 .. 4897477 -  -5.5   -3.4811   GTGGCCACAACAATA          GCCA-GCAGC ATCC GCCGCCCGGC           CGACCTGGCCGCGCG  55 296
LOY45_RS22375 4885804 .. 4885825 -  -9.5  -3.14881   CAAGCCCTGCAGCAA           CCACA-GCTG GAC CAGCCTGTGG           CGCCGTGGACGCTGC  60 142
        hmpA 4880876 .. 4880891 -    -9  -2.52676   GATTGCCGCAAGGCA              CAGCCA TCGC TGGCTG               TGCCCCTATCCTTTC  58 64
LOY45_RS22345 4880137 .. 4880157 - -12.5  -4.64766   CGCAGACGGTAAAAA            GGCGAGCCC AGG GGGCTCGCT            TTTTTTTCCGAAGTA  95 159
LOY45_RS22320 NONE
LOY45_RS22315 NONE
LOY45_RS22310 NONE
LOY45_RS22305 NONE
LOY45_RS22300 NONE
LOY45_RS22295 NONE
LOY45_RS22290 4867078 .. 4867096 -  -7.4  -2.79684   CGAGCAACTCAAGCA             CGGGTAAC CGG GTTACCCC             CTGGCCAGCGCCACA  54 74
LOY45_RS22270 4862177 .. 4862190 -  -3.8  -2.76696   CCGGTTGCCAACAAT               GCTC CTGCTT GAGC                CGGCCCCTGTGGGCT  43 82
LOY45_RS22260 4860906 .. 4860922 -  -4.3  -3.96624   GATGTGTACGAGAAA              GAGCCGC TGA GCGAATC              GCCGCTGTTCCAGCT  60 200
LOY45_RS22245 NONE
LOY45_RS22240 NONE
LOY45_RS22235 NONE
LOY45_RS22230 4853632 .. 4853653 -  -3.6  -3.65314   GGGAATCCCCAACAA           TAGCCGGC TCGACT GCCGCCCA            CAGGAGCCGCCCATG  52 498
LOY45_RS22220 4852552 .. 4852566 -  -4.2  -4.43309   CAATGCTAACGAAAA               CTGACA TAT TGGCAG               TTTACTAGTGCAGCA  68 57
LOY45_RS22215 4850946 .. 4850970 -    -5  -2.74322   CTCAAGTCCGCAAAC         CTAGGCCACCG CACG CGGTGGG-TAG          ATCCGGGTAGGCACA  47 1
LOY45_RS22210 NONE
LOY45_RS22205 4848393 .. 4848404 -  -4.4  -5.52384   GCTGGATGAAAAAAA                CTGA CAGA TCAG                 CCCTGTGCGGCGGTC  91 22
LOY45_RS22200 4847333 .. 4847391 - -10.1  -2.64872   TTGATCGAAGAACAC TCGCCCTGGTGGCCGCTGCGCGAAGGCA TCCG TGCCCGCGCCC-GCGCCTCCCAGGACAA GCCGACCCCGGCCGC  58 203
LOY45_RS22115 4826571 .. 4826587 -  -7.9  -2.71731   TCGATCGGCCAATTA              GCCCTTG GCG CAGGGGC              AAAGCACCGCTACAG  53 108
LOY45_RS22110 4824905 .. 4824925 - -18.3  -5.53288   TCGAAGCGAAAAAAA            CCGGGCGGT ATG ACCGCCCGG            TGCCTGGGGTTACAG 100 35
        moaC NONE
        moaD NONE
        moaE 4823519 .. 4823529 -  -5.4  -2.61264   TTTTGTACTTATAAT                 TCCA TAC TGGA                 CTTTTTGGTATGAAA  46 168
LOY45_RS22090 4822607 .. 4822636 - -16.6  -3.36557   AAGCACCTGAAGGAA       CTCAAGGCCTGA CTACCT TCAGGCCTTGAG        TGAGGCGGCGATCAG  90 37
LOY45_RS22060 4816079 .. 4816111 - -26.4  -3.21258   AGGAAGGGAACCGAA      CAGCCTGCGGCGGC CGAAT GCCGCCGCAGGCTG      CAAGCGTCAGCGCAC 100 32
LOY45_RS22055 4814849 .. 4814862 -  -2.4  -4.10161   TATCAGGTTTGAAAA               CATG GGTACT CATG                CGCTTGTCCTCACCG  56 35
LOY45_RS22050 NONE
LOY45_RS22045 4812908 .. 4812963 - -40.7  -2.59431   CTGTTTCACAACCCA TCGCCGGCAAGGCCGGCTCCCACCG CCGAAC CTGTGGGAGCCGGCCTTGCCGGCGA TGGGCTGCAAAGCAG 100 51
LOY45_RS22035 NONE
        cysD 4809567 .. 4809600 -  -9.6  -2.73159   GCAAGCTTCTCAAAG     TCCATTGTGAGCAC TCTCAC GCGCCCACAATGGG      GCGGCAGCCGACAAA  63 98
LOY45_RS22025 4809186 .. 4809208 -    -7  -3.14468   GCTCATTACATTCAA           GCTCCAAGCT GTA AGCTTCAAGC           GGCAAGCTTGTCGGC  54 47
        cysN 4807236 .. 4807251 - -10.4   -5.4833   GCACGCAACAAAAAA              CCCCAC CGGG GTGGGG               TTTCCTGTTCAGCGC 100 49
LOY45_RS22010 NONE
        mdeB 4802493 .. 4802509 - -13.7  -5.13722   CTGAGCAAAATAAAA              GGCCCCT GTG AGGGGCC              TTTTTTATAAGCGTC 100 152
LOY45_RS21995 4801287 .. 4801300 -  -5.9  -3.58343   TGTATCAGTTCGAAA               GGCGC GGCA GCACC                AGTTCCTTGAGGTCG  58 1
LOY45_RS21990 4799844 .. 4799869 - -18.3  -5.13741   GCAAGGTAACAAAAA         CGGGCCGTCAC TGTA GCGACGGCCCG          GGATAATGGCAATCA 100 58
        zapE 4798652 .. 4798691 - -16.6  -3.24597   AAGCGGCAAGCAAGA  GCAGGATCAAGAGCAG CGCGCGGT CGGCTCTTGATCCTGC   TTGCAGCTTGAAGCT  90 59
        rplM NONE
        rpsI 4795319 .. 4795342 - -18.2  -5.80248   CAAGACATAAAAAAA          GCCCGGTTCC ACCA GGAACCGGGC           TTTTTTTGAACACCG 100 49
        petA NONE
LOY45_RS21955 NONE
LOY45_RS21950 4792446 .. 4792492 - -29.6  -3.84451   TGCTGCAAATGCAAA CGCGCCCTGCGGGCGCCCCTG TGAATC CAGAGGCGCCC-CAGGGCGCG TTCAACTACCAGAAA 100 52
LOY45_RS21945 NONE
LOY45_RS21940 4791304 .. 4791323 - -13.6   -5.4492   GACAGACACAAAAAA            GGCGATCC CTGC GGATCGCC             TTTTTTGTTACTTGA 100 33
        rsmI NONE
        rnpB 4785891 .. 4785913 -  -2.7  -4.06778   ACGAAAAAACTCAAA           CCCACTC AGACGGATA GAGTGAG           AAGTTAAAGTAATTT  58 108
        mraZ NONE
        rsmH 4784283 .. 4784294 -  -7.2  -3.61517   AGGCTTGGCGAACAA                GCGG CTCA CCGC                 AGCTTCTCGGCGACG  63 19
        ftsL NONE
LOY45_RS21885 NONE
LOY45_RS21880 NONE
LOY45_RS21875 NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG NONE
        murC NONE
LOY45_RS21845 NONE
LOY45_RS21840 NONE
        ftsA NONE
        ftsZ 4768856 .. 4768889 -  -2.3  -3.16742   GCGAACTGGTATCAA     CAAAGGCTGAGGATA ATAC CAGACCCGGCCTTTG      CTGAACACCAATCAC  42 64
        lpxC 4767856 .. 4767873 - -12.7  -5.28778   ACCAGGCATAAAAAA             GGCCACC CGAA GGTGGCC              CAAAAAAACTAAAGA 100 56
        secA 4764216 .. 4764244 - -16.8  -3.70773   CTTGAGATGGAACAA       CGCCGCGAC-GGT GAGT ACCAGTCGCGGCG        CGGTGTTCAGATGTC 100 64
        argJ NONE
LOY45_RS21805 NONE
LOY45_RS21800 4761209 .. 4761247 -  -7.4  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAAAGACTG CATACAC CGAACCTTGTGGGAGC   TGGCTTGCCAGCGAT  53 62
LOY45_RS21780 4757016 .. 4757036 -  -4.5  -4.62069   CTCGGACGCCAAAAA            GGCGCCAAG GTT CCGGGCTCC            GTGACTTCAGTCGCG  71 32
LOY45_RS21775 4756015 .. 4756073 - -32.8  -3.53761   TAATGGCTGCTGAAA GCATCGCGGGGCAAGCCCGCTCCTACA GGATTG TGTAGGAGCGGGCTTGCCCCGCGATT- GCGTCGGTCGTTACT 100 36
LOY45_RS21770 NONE
LOY45_RS21755 NONE
LOY45_RS21750 4750688 .. 4750701 -  -2.3  -2.53581   TAGACCTTTAATGGA               TGCGA TCCA TCGCC                ATTTCAAGCCTCGGC  38 29
        fxsA 4750098 .. 4750115 - -14.1  -4.34402   CCCTGTACAGCAAAA             CGGCCCC AAAA GGGGCCG              CTGGCACAGCACAAG 100 47
LOY45_RS21740 4749570 .. 4749580 -  -2.4  -3.15427   AATACTTTGGAGTAA                 CGGG AAA CCAG                 CGGAATCAGCCTTCG  42 31
        groL 4747842 .. 4747860 - -13.1  -5.81412   TTCAGGCAAAAAAAA             GCCCCGC ACTAG GCGGGGC             TTTTTATCGAACGGG 100 51
        colR NONE
LOY45_RS21720 4744714 .. 4744732 -  -6.6  -3.05844   CTCCTGACTCCAATA             CGCCCACC TTA GGCAGGCA             AGCGTTGGCGTCAGG  54 121
LOY45_RS21715 NONE
LOY45_RS21710 NONE
LOY45_RS21705 NONE
LOY45_RS21655 4728564 .. 4728581 -  -4.1  -3.30124   CGCCAGGGCCTACAA             GGGCA CCAGCCAC TGCCC              GGCTGTGAGGCGCAG  48 2
LOY45_RS21650 4727459 .. 4727481 -  -4.9  -3.99324   GGTCAGTAGTATAAA          GCCTGATCAG CGCA CTGATC-GAC           CGCAAAGCCTTGATC  59 45
LOY45_RS21645 4726264 .. 4726286 -  -7.7  -3.72893   GAGCGCTTCACCAAA           GCCAGCG CCAATGCTT CGCTGGC           CAGTGGCAAAGCCGA  65 310
LOY45_RS21625 4722898 .. 4722914 -  -6.5  -3.71873   CCATCGACACGCAAA              CACCGCT GCA ACCGGTG              GCCCTGCGCTACCTG  62 274
LOY45_RS21610 4720576 .. 4720594 -  -5.9  -3.05463   ATGCCGCTTACTCAA             GGCCAGG GTTCG CCCAGCC             TGCCAGCGTTTCATG  52 36
LOY45_RS21605 NONE
LOY45_RS21600 4719184 .. 4719197 -  -3.8  -3.16564   CCTTCACGGCAGCAA               GCGA CAGCCC TCGC                GCGGGCCCAGCCACT  46 0
LOY45_RS21595 NONE
LOY45_RS21590 4717350 .. 4717361 -  -2.2  -3.75629   CAGGTGCAATGGAAA                GGTA AAGA CACC                 ATAGACCGTCAGCTT  51 50
LOY45_RS21585 4716579 .. 4716605 -   -18  -5.36441   TGCTGATAGAAAAAA         GCGGCAGGGGGA TTA TTCCCCTGCCGC         TTTTTTTTTGCCTGT 100 159
LOY45_RS21575 NONE
LOY45_RS21570 4712629 .. 4712652 - -13.8  -4.16284   ACACTGCTGAACAAA          GCCCTGCAGC CTGT GCTGCGGGGC           TTTTTTTTGGCCGGA  95 42
LOY45_RS21560 4710518 .. 4710530 -  -3.4  -3.28791   ACCCGCGCGTCACAA                TCAG ACCTG CTGA                CTTTAGTATTAACGC  46 34
LOY45_RS21555 4710022 .. 4710044 -  -3.2  -2.83255   AGAAGATCGACCAGA           GTCTAGGGCC ACA GGCCCGTCAC           GGCCAGCGTCAAGCC  41 34
        sbcB 4708523 .. 4708539 - -13.7  -5.75945   ACTCGCTAAAAAAAA              CGCCAGC TTA GCTGGCG              TTTTTTATTTTCAAC 100 47
        purU NONE
LOY45_RS21535 4706753 .. 4706767 -  -3.5  -3.05384   TTGCGGCTCAGTCAA              GCG-CG GATT CGTCGC               TAGCCGGCTTGACCC  46 3
LOY45_RS21510 4700125 .. 4700142 - -14.1   -4.7254   ACCCCGCAGTAAAAA             GGCGCCC CGAG GGGCGCC              TTTTTTATGCCTGAT 100 45
LOY45_RS21500 4697887 .. 4697914 -   -12  -3.05384   TTGCTGCGGATCCAA        CCGCCTCTGCCC AGGC AGACAGAAGCGG         ACCGCTGCAAGTGCC  74 399
        pcaR 4696414 .. 4696424 -  -6.8  -3.55548   GAACAGGTTCGGAAA                 GCTG GAT CAGC                 TGCCGCGCAGTCCAG  60 214
LOY45_RS21485 4694932 .. 4694970 -  -2.2  -3.55444   CGGGCACCGCGCAAA   GCCAGGCATAGCGTCGAT ACC ATCGCCGGCAAGGCCAGC   TCCCACAGGCTGCCG  48 44
LOY45_RS21480 NONE
LOY45_RS21475 4693093 .. 4693123 -  -3.1  -2.76686   ATCGCAGATAAAGAC       GTCACGCATCAGG CTTCT CCTGGCGCTTGGC       CGTGGGCGGCGGCGG  41 3
        pcaF 4691844 .. 4691896 - -14.9  -3.52896   CCACGATCCACAGAA CAATCACCCCAGGCCGCCAACCT TGCGTGG AGGCCGGCGGCTCGGGATCATTG CTTTACACCCGCTCG  88 28
LOY45_RS21465 NONE
        pcaD NONE
        pcaC 4689129 .. 4689166 - -10.7  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGT-TGG GTGGTTG CAATACCTGTGGGAGC   CGGCCTTGCCGGCGA  64 55
LOY45_RS21445 4687573 .. 4687587 -  -2.1  -4.33274   GGTACACGACGAAAA              CA-CCG TCAC CGGCTG               GGAGCTGTTCGGCCG  65 229
LOY45_RS21425 4681977 .. 4681993 -    -8  -4.63542   GATAACTGGGAAAAA              CTCAGC CGCGC GCTGAG              TCGAGAAGAGATCGA  85 499
LOY45_RS21415 4680201 .. 4680215 -  -7.8  -3.15544   GCTGACCCTGATGAA               CCGCTA CAT CAGCGG               CGACAACGTGCATAC  55 324
LOY45_RS21390 4671719 .. 4671737 - -10.2  -3.28924   CACCGGGCGCTACAA             GCCGCAGA TTC TCGGCGGC             GCCCTGCTGATGCCG  65 517
LOY45_RS21375 4668164 .. 4668177 -  -9.5   -3.5393   AGGACCTGCTCTAAA               CCGGG CATA CCCGG                CCAGGCTGACCTATG  70 249
LOY45_RS21360 NONE
LOY45_RS21355 4665587 .. 4665610 -  -9.6  -3.14132   GCCGCGTTGCAGGAA          CTGCTCGC CTGGTTGT GCGAGCAG           GCCCAGGCCCCTCAA  66 37
LOY45_RS21345 NONE
LOY45_RS21340 4661293 .. 4661321 -    -8  -3.44051   GTTGCAGTACCAGAA        GCAGCTGCGCCT GCAGG AAGCGCGGCGGC        TGATGCTCAATGACG  60 270
LOY45_RS21330 4660008 .. 4660018 -  -2.4  -2.82291   AATCCACATCAATTA                 CCTG AAG CCGG                 CATTCTAACCTGCGC  39 30
LOY45_RS21325 4659641 .. 4659657 -  -8.7  -2.71364   GCATCTGCTCAAGGA              CGGCATC TAC GATACCG              CTGCAGGCCAGCCGA  53 122
LOY45_RS21290 NONE
LOY45_RS21285 4650011 .. 4650027 -  -2.2  -3.14132   GCTGTTGTTCAGTAA              GCAATG TCATG CGTTGC              GCTACTCGTTATTGA  42 45
LOY45_RS21280 NONE
LOY45_RS21275 4647995 .. 4648042 -  -8.4  -2.72144   CTATCGCCGGCAAAC GCCGGCTCCCACAGTGGATCTG CGTGCT CCGA-CC-CTGTGGGGGCTGGC TTGCCAGCGATCGAG  56 62
LOY45_RS21245 4640493 .. 4640503 -  -2.4  -2.64155   GTGTCCTGAAAGTCA                 GTGC AAG GCGC                 GAAGTCTACGGCAGC  38 62
LOY45_RS21240 4639776 .. 4639797 -  -6.7  -2.57132   CCGGCGTGCGAGAAG           GACATGAAT AGGA ATTCATATC            ATTCTCACATACCTG  50 60
LOY45_RS21235 NONE
LOY45_RS21230 4638219 .. 4638234 -  -3.2  -3.18264   GGGTTCAGCGATGAA              GACG-GG CCA CCTCGCC              ATTACCCCTCAAAAT  43 45
LOY45_RS21225 NONE
         fes 4634103 .. 4634161 - -34.2  -2.78679   GCCGGGGATGGAAAC GGCATCGCGGGGCAAGCCCGCTCCTAC AGATGG GTAGGAGCGGGCTTGCCCCGCGAT-CG AGCCATTACCGGAGC 100 31
LOY45_RS21210 4631589 .. 4631603 -  -5.6  -3.14211   AGCCTCCTGCATCAA               CGGCCC CAA AGGCCA               GAAAGAAGATGCACG  50 263
LOY45_RS21180 4627215 .. 4627257 - -16.5  -4.03093   GACAAGGACCAGAAA CCG-CGTTGGCA-CTGGGC GGACATT GCCCAGGTGCCAACGGCGG TGGTCCAGGCGCATT  95 96
         ung 4625290 .. 4625322 - -11.9  -2.75992   TTCCAGCGAAGAGGA      CCGTGGCAGCCAGCC TGT AGCTGACTGCCGTGG      AAAACCTGGAAGTAT  71 94
LOY45_RS21165 4623177 .. 4623197 -  -3.1  -3.06087   AATAGATTTGGAACA            CCATCAGCA CCA CGCCGTCGG            CCCAGCCGCCACCCT  43 156
LOY45_RS21160 4621200 .. 4621224 - -18.7   -5.4251   TCCATATAGAAAAAA          TGAAGCCGAGC ATT GCTCGGCTTCA          TTCATTATCAAACAC 100 46
LOY45_RS21155 4618724 .. 4618743 - -12.2  -5.64006   ACTGAAGCAAAAAAA            GAGGAAGC CAGG GCTTCCTC             TGTTTCATTGCGCGC 100 41
LOY45_RS21125 NONE
LOY45_RS21120 4610996 .. 4611008 - -10.5   -3.4617   AGCAACAGCAAGGAA                CGGCC GCT GGCCG                CCCTGCCCGCCTACC  69 111
LOY45_RS21105 NONE
LOY45_RS21100 4608299 .. 4608312 -  -4.5  -3.55487   CTACAGCAACTACAA               GGTCA GCCG CGACC                TGATCGAATTGCGCA  51 152
        rpoE NONE
LOY45_RS21085 NONE
LOY45_RS21080 4604124 .. 4604147 -  -8.8  -3.86944   TGCAGAAGCAGGAAA          GGCCAGCCCC CGAA AGGACTGACC           TATAGAAAAATTCTG  73 118
LOY45_RS21075 4602602 .. 4602619 - -12.7  -5.28778   AGCACCCAGAAAAAA             GGGCAGC CGAG GCTGCCC              TTTTCTGCTCAACCC 100 44
        lepA NONE
        lepB 4599715 .. 4599749 - -10.7  -3.89524   AGCCTATGCCAGAAA    CGCATTCGGCGCTGTC CCAG GACAGCGCCGT-TGTG     GTGTTACTTGATCAA  79 29
         rnc NONE
         era 4597881 .. 4597917 -  -7.2  -3.21276   CGGCGCTTCAGAAGA   GGTTC-GACCCGGCAGC GGAC GCTACCGGGCCTGGAGC    AATCAGAGGTCGCCG  57 28
        recO 4597137 .. 4597161 -  -2.1  -3.18264   GCTTTGAGTCACGAA          GAGGCTC TCCTGAAGATT GAGCCCC          ACAGCATACGACGTT  42 43
        pdxJ 4596369 .. 4596383 -  -3.4  -3.37283   CAAACCTTTCAAACA               GCTGGC AAG ACCTGC               GTTGTCTCAGCGTGT  46 32
LOY45_RS21040 NONE
LOY45_RS21035 4590471 .. 4590481 -  -2.4  -3.14881   CAACCTGCTCAGCAA                 TGCG ATC CGCC                 ATGGGTATGAGGGGC  42 411
LOY45_RS21020 NONE
LOY45_RS21015 NONE
LOY45_RS21010 4582754 .. 4582774 - -19.7  -3.17797   GGCAGAGATACGCAA            GGCGCCCGC AAT GCGGGCGCC            ATGGGTATCCTGACA 100 72
LOY45_RS21005 4581351 .. 4581365 -  -4.2  -3.18274   CGGAGGGCAAGCTAA               CGCC AAGGTGA GGCG               GACATTACAGTGCTG  47 52
LOY45_RS21000 4581021 .. 4581039 - -13.1   -3.8125   CGCGCAAGTAAAACA             GGCGCCC GTGTA GGGCGCC             AAAGTTCACCTTTTC  85 73
LOY45_RS20960 4569466 .. 4569490 -  -7.8  -3.14051   CCAGGGCGATGAACA         GCCTGCGCCGG CTCA CCGGCTCAG-C          GGCCGCGTTGCATTT  57 21
LOY45_RS20955 4568585 .. 4568603 -  -3.9  -3.72324   GATGCCCAGGAACAA            CAGCCACT GGCC AGTG-CTG             CGCAGGTCGAGGTGA  56 250
LOY45_RS20940 4566457 .. 4566474 -  -4.7  -3.57144   TCGGGCAGCTTCAAA             CTGGCCG ACGG CAGCCCG              CTGGTGATGGGCGGC  55 316
LOY45_RS20930 4561741 .. 4561762 - -14.5  -5.77853   AACCCCCAAAAAAAA           GCCCGTATC CATC GATACGGGC            TTTTTCATGACAACC 100 47
LOY45_RS20925 4560771 .. 4560785 -  -5.6   -4.1822   CTGGATTTCAACAAA               CGCCTG AAC CAGCCG               ATGCGTGCGGTTGCC  64 190
LOY45_RS20915 NONE
LOY45_RS20910 NONE
LOY45_RS20905 4556206 .. 4556231 -  -2.5  -4.29106   TGCCACACCAACAAA         TGCCCGACCGGC GTC GCCACTCAGG-A         CCCGCTGCGCCAGCG  63 329
LOY45_RS20895 4553951 .. 4553992 - -13.7  -3.08679   CGGCGGCATGCAAGA CGCCGGGCGCTGGGCCCTGC TGC GCAAA-CCCAACGCCAAGCG CGACGAAGACCTCGA  76 487
LOY45_RS20885 NONE
LOY45_RS20880 4548670 .. 4548680 -  -6.8  -3.10715   GTGATGATGATGCAA                 CTGG TGG CCAG                 CGGCCGCGGGGTCTG  51 246
        metE 4545520 .. 4545556 -   -13  -2.55544   CTATGAGTTAATCCA    GGCGCCAAGGGAACAG GCAAG CTGCTCCCTTGGCGTA    TTCTCACGCCAGCTC  72 29
LOY45_RS20855 4538855 .. 4538899 - -11.5  -3.02144   CCATCGCCGGCAAGA CCGGCTCCCACAAAATCCG GTGCATG CAGATCCTGTAGGAGCGGG CTTGCCCCGCGATCA  70 38
        ybaK 4525866 .. 4525883 -  -2.7  -3.01416   GACGACCGACAGAGA             CAGAATC AAGC GATTTTG              AGCATACAGATGTCA  42 38
LOY45_RS20790 4524941 .. 4524952 -  -7.2  -3.28712   GCCGGTGCCGGAGAA                CGGC GTTC GCCG                 GTACAGCTCGGCGGT  59 95
LOY45_RS20775 4520430 .. 4520448 - -12.4  -3.60627   GCATTGTATCGGAAA             GCCGAGCA GGA CGCTCGGC             CTTGCCGATATCAGG  79 36
        grxD 4519992 .. 4520008 - -15.1  -5.29782   TACAGGCACAAAAAA              GCCCCGC ACT GCGGGGC              TTTTTTTTGACCAAA 100 48
LOY45_RS20750 4518201 .. 4518217 - -10.8  -5.64274   TCAGGCATAAAAAAA              CCGGCC ATCAA GGCCGG              TTTTTTTATGCCTGG 100 44
LOY45_RS20735 4515279 .. 4515295 -  -6.5  -3.96148   GCTTGTGACGACAAA              GCGACAG GAA CTGTCGA              GAGCGCGACGGACGG  66 48
LOY45_RS20730 4513934 .. 4513949 - -11.8  -5.81412   TGCAGCTAAAAAAAA              CCCCGG CAAG CCGGGG               TTCTTTCACAGGCAG 100 47
LOY45_RS20720 4512257 .. 4512273 -  -9.4  -4.90266   TCTATTAATCAAAAA              GCCTCC TTGCT GGAGGC              TTTGTTGTTTCTGGG  90 45
        apbC 4504251 .. 4504273 -  -8.3  -4.17556   TACAGCTTGAAGAAA           GCCCCGCCC TTAAC AGGTGGGGC           TTTTTTTATGCCCTG  73 141
         dcd NONE
LOY45_RS20660 4502378 .. 4502415 -  -7.6  -3.68936   CACGAAGCCGAAGAA   CGCGCCCGGCGCTACCT GGACA AGGTCG-GCCTGGCGCC   ACGGGTGGCGGATCA  65 375
LOY45_RS20600 4490953 .. 4490994 - -16.7  -3.44206   GAACACTCATGAGAA TTGCTCCTGTGTCACCGGC CTCT ACCGGTCACACAGGAGTAA  AGACCGGCCTGCGGT  93 69
LOY45_RS20595 4490197 .. 4490209 -  -9.1   -2.6155   GCCTGCAACAGTAAC                GGCTG ACA CAGCC                CTTGTGCCAGCGCTT  59 44
LOY45_RS20590 NONE
LOY45_RS20585 4489040 .. 4489069 -  -9.9  -3.17075   TTGTGGTGAATTGAA       GGCCGGGGGGCTGC TAC GCAGCCCATCG-CC       GGCAAGGCCGGCTCC  66 60
        dinG 4486309 .. 4486331 - -11.2  -2.75993   TGAGTGATAGACAAC           GCCCGGAGCA TTG CGCTCCGGGT           TTCAGGAAATTTCTC  69 27
LOY45_RS20570 4483966 .. 4483986 -  -5.3  -3.68962   TGGGAACAGACAGAA            GCCGGGC GGTCCAT GCCAGGC            GGCTGGGGTCAGGGG  56 34
LOY45_RS20565 4482672 .. 4482692 -  -2.3  -2.61766   AAAATGAAAGAAATT            TGGCCCAGC AAT GCAGGGCTT            TGGAATTCAGAATAG  38 74
LOY45_RS20560 NONE
        pdxH 4480951 .. 4480982 - -12.9  -3.11732   GTCAAACGCAGTGAA      CTGGCGGCCTGGC TGGAAC GCGAGGCCGCCGG       TTACCAGGCCGATTA  75 38
LOY45_RS20545 4480103 .. 4480128 - -16.9   -5.5074   CAAGGCAATAAAAAA         CCCCGAC-CGGC ATT GCCGAGTCGGGG         TTTTTAATGGGGGGG 100 47
LOY45_RS20535 4477503 .. 4477561 - -40.7  -3.37761   ACCGCAACACAGTAA TCGCCGGCAACGCCGGCTCCCACAA GGGCCTGAT TTGTGGGAGCCGGCGTTGCCGGCGA TGGGCTGCAAGGCAG 100 48
LOY45_RS20515 4473049 .. 4473060 -  -7.2   -4.8083   CAACATCAGGAAAAA                GGCC TTCG GGCC                 TTTTTTCTTGCCCGC  83 367
LOY45_RS20480 4467180 .. 4467234 - -41.1  -3.67296   GATTACTGATTGAAA GCATCGCGGGGCCAGCCCGCTCCTAC ATCT GTAGGAGCGGGCTGGCCCCGCGAT-C AGACTGTTACCGTAC 100 144
LOY45_RS20470 4463875 .. 4463897 -  -4.8  -3.64703   CCTTGGCGAGCTAAA           CCAGCGCC ATGAACA AGCGCTGA           GCAGCTTCAATCCTT  55 32
LOY45_RS20460 4460035 .. 4460049 -   -10  -3.15861   CAGGATCTTTATCAA               CCTGCA GAT TGCAGG               CAAACATTGAACCTT  66 73
LOY45_RS20450 4456306 .. 4456316 -  -2.4  -3.04715   CAGGGCCGGTAAAAT                 GTGC GGG GCGC                 TTCACAATTGCCGGC  41 40
LOY45_RS20445 NONE
LOY45_RS20440 4455370 .. 4455389 -  -9.2    -5.626   CACCGGACAAAAAAA            TGGGCGAC CGAA GTCGCCCT             AAATGCCTTGCGTGC 100 308
LOY45_RS20435 NONE
LOY45_RS20430 NONE
LOY45_RS20425 4451696 .. 4451736 -    -4  -3.90744   CTTTCTGGTAAACAA CGCGGGTATCGGCATCAACG CGC CGTTCA-G-CGAAACCAGCG AAGCGCAGTTCGAAC  58 467
LOY45_RS20415 4450008 .. 4450020 -  -6.2  -3.59979   GCCTCTGAGCTGAAA                CGGG TGCAC CCCG                AACGGCTGATCCGCC  58 377
LOY45_RS20405 4448605 .. 4448631 -  -4.4  -3.04144   CGGGCAGCTGGAACA        GGCGTT-GCCC TGGCGC GGGCGAACCCC         GCCGGTCTGGGCGGC  44 103
LOY45_RS20395 4446405 .. 4446437 -  -9.1  -3.23984   GAAACCGAGCAGCAA      CTCATGGCCCTTGGC AAG GAGAAGTGCCATGAG      GTGCAGGGCTACTAC  62 115
LOY45_RS20380 4441169 .. 4441197 - -13.9   -3.2614   GATCTTCGACAGCAA        GACCGACGTCG CCTTCCT CGACGTCGGCC        GCAAGGTGATGGAAA  78 414
LOY45_RS20365 4437704 .. 4437720 -  -3.7  -3.32844   TGTGGGAGCTCATAA              GACAG CTGATGT CTGTC              GATTAAGGAGGTGAT  48 29
LOY45_RS20360 NONE
LOY45_RS20355 4437423 .. 4437463 - -10.7  -4.60889   AACGATTCTGAAAAA  GTTCAGAAATCAATATTCG AGG CGAATATTCATTTCTAAGC  TTTGACGTAAGGTGG  93 38
LOY45_RS20350 4434228 .. 4434241 -  -5.3  -4.15222   ATGGTCGTCAAGAAA               TTCTG TTGC CAGAA                GGTCTTGTTAGACAC  64 155
         rrf 4434065 .. 4434100 - -19.2  -3.56262   CAAATGCCAGAAAGA    CAAAACCCCTACCTGC GTAC GCAGATAGGGGTTTCG     GAATTTAATCTTGAC 100 34
LOY45_RS20335 NONE
LOY45_RS20330 4431335 .. 4431359 - -19.3  -2.78384   GCCCTTGCGAGGACA          CGTGGGGCCGA CAC CCGGCCCCACG          TGATCTTGCCTTCAC  95 37
LOY45_RS20315 4428935 .. 4428952 - -12.7  -4.77165   TGTTCTACAAGAAAA             GGCTGCC GCTA GGCAGCC              TTTTTTATTTGTCCT 100 43
LOY45_RS20300 NONE
LOY45_RS20295 NONE
LOY45_RS20290 4420704 .. 4420716 -  -4.8  -4.41348   TCTCGCTGAAAGAAA                GCCT GTTCA AGGC                GCTCTACCCGATCGT  70 213
LOY45_RS20275 4418431 .. 4418461 - -17.7  -2.69661   AATGCAGAATAACAG      CGAACCGGCCGTGC GCAT GCA-GGCCGGTTCG       GACATCGCCAGGCGA  86 42
LOY45_RS20270 4417685 .. 4417704 -  -2.8  -2.54896   GGCGTAGCGAACGGA            TCATCG-GC AAC GCTCGGTGA            ACAGGTAGCCCAGGC  39 6
LOY45_RS20265 4416319 .. 4416334 -    -6  -2.85061   AGAATCCGACAATGA              TGGCGG TAAT CCGCCT               AGGTATTTCTTTCCA  49 24
LOY45_RS20260 4414697 .. 4414714 - -11.3   -5.4251   CGCAGACACAAAAAA             GCCCATC CGAA GATGGGC              TTTTTGCGTTACGCA 100 50
        ttcA NONE
LOY45_RS20240 4411540 .. 4411591 - -37.7     -2.55   TAAGAGTTGAATCCA TCGCTGGCAAGCCAGCTCCCACA GGGTTT TGTGGGAGCTGGCTTGCCAGCGA TCATGGCACCACCGA 100 43
LOY45_RS20220 4409332 .. 4409353 -  -8.7  -3.31144   GCTGGACGGCGACAA           GCTGACCTT CGGC AAGGTCGGC            AGTACCCGCAAGCTG  60 284
LOY45_RS20195 NONE
LOY45_RS20190 4402438 .. 4402460 -  -2.7  -3.42056   AGCTGCAAGCTATAA           GCAAGAG TTTACGGCC CTCTCGC           TGGCAAGCCAGCTCC  48 116
        cysM NONE
        rlmD 4400026 .. 4400062 -    -3  -2.90615   ATGCGCTTGAAATCA   CTGGTGCTGC-CCCTG CCGGACC CAAGGTGCAGCGCC-G   AACGCGTCAGCCTGG  42 41
        relA 4397678 .. 4397716 - -10.4  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAGG-ATC-GG AGCAA CCTGTTTCCTGTGGGAGC  CGGCTTGCCGGCGAT  64 47
        mazG 4396804 .. 4396821 -  -6.9  -3.09878   CTCACTTATGCAACA             GCTCAGC CGCA GCTGGGC              AGGTTCTTTTCCTGA  54 10
LOY45_RS20165 4396213 .. 4396236 - -16.8  -5.24129   CCCCTCCAGAAAAAA          CAAACCCCGC CGAA GCGGGGTTTG           TCGTCATTACCACAT 100 32
LOY45_RS20140 4391972 .. 4391983 -  -3.6  -3.19463   TGTATCAGTCATGAA                CGGC TCCG GCCA                 GGTCAGGGGTTACCA  46 35
LOY45_RS20135 4390848 .. 4390881 - -15.5  -4.27965   ACAAGTAAAATCAAA     GGCTTGCATTAG-CGT CTA ACGACCAATGCAAGCC     AGGTGCTATCAAGCT 100 39
         hda NONE
LOY45_RS20125 4389229 .. 4389264 - -14.9  -3.34398   CGCTTTCTGTAAACA   CGCACGGCGACG-AGCT TTTC AGCTACGTCGCCGTG-G    TCAAACCTGTCGAAG  86 43
LOY45_RS20120 NONE
LOY45_RS20115 4387654 .. 4387671 -  -3.4  -3.79113   AGCGCCTTACAACAA             CGATAG TGGTAG CCATCG              AGGGCACCGCCAGAT  54 303
        cobO NONE
LOY45_RS20090 4382330 .. 4382340 -  -4.6  -3.51924   CGGTCATGGACACAA                 CAGC GCC GCCG                 ACGCCTGGGGGTTGG  52 3
        bluB NONE
        cbiB NONE
        cobD NONE
LOY45_RS20070 NONE
        cobU NONE
        cobT NONE
LOY45_RS20055 NONE
LOY45_RS20050 4375411 .. 4375428 -  -5.5  -3.65812   CGCTGGTCAACATAA             TGCGTGT ATAT ACCCGCA              CCTGGCCAACTGCAA  56 56
LOY45_RS20045 NONE
LOY45_RS20040 4373726 .. 4373744 -  -6.6  -3.04501   AGCAAGGTGCGAATA             GCGACAGG GTT CATGCCGC             TTGCGCCTGCAAGCG  53 17
LOY45_RS20035 4373611 .. 4373623 -  -4.1  -3.05997   CCTGGAGAAATCAGA                GTACT CCT AGCAC                ACGCCCATGCCCAAC  46 19
LOY45_RS20030 4372708 .. 4372725 -  -6.9  -2.79327   CTACCCGAGCCAAAG             GCGGCCT TGCT AGGCTGC              GCCCTCCCCCACACC  51 323
LOY45_RS20020 4371684 .. 4371699 -  -7.5  -5.55664   GCACCACTAAAAAAA              CCGCC TTCATT GGCGG               TTTTTTATGCCTGAT  95 30
LOY45_RS20000 4367660 .. 4367670 -  -8.2  -2.88861   CACCAGCGTCAGACA                 CGGC ACA GCCG                 CCACCACGATACCCA  57 138
        rmuC 4365996 .. 4366024 - -11.5  -4.07568   TGCCTTGCTGGAAAA        CGGCCTGCGCCCG CAC CTGGCGCTGGTCG        ACTATCACCTGGACG  81 212
LOY45_RS19980 4360548 .. 4360567 -  -5.7  -3.02829   CATACCTGCCGAAGA            GGCCCTGC TGCAC GCAGG-CC            AACTTCTGCGCTGCG  48 274
LOY45_RS19965 NONE
LOY45_RS19960 4355365 .. 4355378 -  -2.3  -4.00042   CTGGCCATGAAAGAA               CTGCC GCTG GGCAC                CGCCTACGCGATCTG  57 189
LOY45_RS19940 4352772 .. 4352782 -  -4.6  -2.76189   TAACCGACTGAACTA                 CCGC TGC GCGA                 TACACTGAGAAGTGG  44 38
LOY45_RS19935 4352632 .. 4352663 - -16.8  -3.93236   GACGAATTCCAGAAA      CAAAAAAAGCGACC CTAA GGTCGCTTTCTTTG       TTGCTTCCGGGTGTT 100 64
LOY45_RS19930 4350798 .. 4350841 - -21.8  -2.70932   GCCGCCCGTCAATCA GCCGCAGGACAACCTGCAGG GTGG CCTGCAAGCCGCCCTGCGAC GGCTCAACGGTCAGT 100 36
LOY45_RS19910 4342299 .. 4342326 - -22.8  -6.20267   CGAAAAACAAAAAAA        GGCGCCTGGAGC CGAA GCTCCAGGCGCC         TTTGCCTGGTCGTTT 100 205
        nirB 4339678 .. 4339690 -  -4.8  -2.83522   ACTGGCTCATCAAAG                CACC TCCTC GGTG                GTCGGGATCAAGTGA  44 7
        nirD 4339243 .. 4339287 - -11.6  -3.02144   CGATCGCCGGCAAGA CCGGCTCCCACAG-GTACTG CATACCC CAG-ACACTGTGGGAGCTGG CTTGCCAGCGATGAG  70 45
        pcaQ 4338227 .. 4338244 -  -6.9  -3.68738   CCTGCAAGAAATCAA             CGCGCTG TTGT CAGCGGG              CACTCAAGGGTAGTG  60 29
LOY45_RS19870 4332486 .. 4332517 - -22.4  -3.95219   GTTAAACCCCAGAAA      CGACAACGCCCCGT CGAG ACGGGGCGTTGCCG       GTATCAGCTGGCCTT 100 39
LOY45_RS19865 NONE
LOY45_RS19860 NONE
LOY45_RS19855 4330948 .. 4330985 -  -9.1  -2.74563   CTCACAGGCCAAGCA   TCAGGCCAAGGATGTGC CCGG GCACAGCCTGTACCTGA    TCGATACCGCGCCTG  56 45
LOY45_RS19840 4325877 .. 4325914 - -12.1  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTACTG CATATAC CTG-ACCTGTGGGAGC   TGGCTTGCCAGCGAT  70 48
        phnR 4319541 .. 4319578 -  -5.6  -3.64703   CGCCGTTCAGCGAAA   CGCCCACCAAGGCCTAA CCGGC TTCGGCCTTGATGCG-G   ATCGCATCATGGCGC  56 1
LOY45_RS19765 NONE
LOY45_RS19760 4310207 .. 4310229 -  -6.9  -3.66654   CAGTTCAAGGGCAAA           CGCTCGATG GAAAT CACCGCGCG           GCTGCTGCTCAACAC  59 414
LOY45_RS19745 4307738 .. 4307751 -  -8.1  -3.14564   TGAGGGGCTGAGCAA               CCAGC AGGC GCTGG                TCTGGACCGGGGTCA  55 187
LOY45_RS19735 4305129 .. 4305164 - -24.8  -2.92439   AACAGCCTGAAACGA    CAAGGCCGCGACAGCG TTTT CGCTGCCGCGGCCCTG     GAAGGTGCCAGACAG 100 54
LOY45_RS19730 NONE
LOY45_RS19725 4302932 .. 4302987 -   -22  -3.42056   AGCTGCAAGCCATAA GCAGCAAGCCGCCAGTCAAAGCAGTA CGCG TACGGCTTCAACTGGCGGCTTGTAGC TTGGAGCGTGCAGCT 100 73
LOY45_RS19715 4301689 .. 4301699 -  -2.4  -3.39784   GGATGGCCAAGAATA                 CCTG ACA CCGG                 CGCTCACGCCTGGGA  46 29
LOY45_RS19710 4301200 .. 4301213 -  -2.3  -3.85698   CCGCTCCTCCACAAA               TCAGG GAAT CCGGA                GACTGCACGGGGTGC  51 129
        csrA 4300654 .. 4300664 -  -4.6  -3.86311   ATACGCAAATGGAAA                 GCGA TAC CCGC                 GTGCCGGCAGTCGAT  60 360
         pap 4291998 .. 4292010 -  -3.3  -3.53012   TTTGGTGGGGGGAAA                CCGGA TTC TACGG                GGTGGGCTGATGGGG  48 188
LOY45_RS19670 4290550 .. 4290574 -   -10  -2.70932   CCTGCCGGCCAACGA          GCCGGGCA GCTCGATCA TGCCCGGC          AAGGTCAACCCGACC  59 459
LOY45_RS19660 NONE
LOY45_RS19655 4288568 .. 4288586 - -13.1  -6.17268   GGATAACAAAAAAAA             CGCGCCG ACGAG CGGCGCG             TTTTTTATTCTAGCA 100 58
LOY45_RS19650 NONE
LOY45_RS19645 4286944 .. 4286954 -  -6.8  -2.73364   CCGGCAGGTCAAGCA                 CAGG CGG CCTG                 CTTCAGCCAGCGGCC  51 8
LOY45_RS19640 4285052 .. 4285063 -  -2.2  -2.97667   CCACCTACCAAAGCA                CAGC CTAG GCTA                 TTTGCCATTAATACT  41 74
LOY45_RS19635 NONE
LOY45_RS19630 4281626 .. 4281642 -  -4.4   -4.2142   AACACCGGAAAACAA              TCCGCT GCCAG AGCAGA              TCATGCCGGTCTACC  66 102
        mtnA 4276758 .. 4276777 -   -15  -3.72893   GATCTGCGCAGTAAA            GGCTGCCC CGCG GGGCAGCC             TTGGAAACCGTCGGA  95 150
        gyrA NONE
        serC NONE
        pheA NONE
LOY45_RS19585 NONE
         cmk 4268685 .. 4268727 -  -2.7  -4.03234   TTTCGTTCATATAAA GGAAAGCCGACAGGA CGTTGACTGGTGC CCCTGCCTGCCTTCC TGGTCATCAGGCGAT  58 32
        rpsA 4266893 .. 4266910 - -12.7  -5.28176   CGCAGGCACAAAAAA             GGGCGAC CGAA GTCGCCC              TTTTTTAAACACCAG 100 47
        ihfB 4266305 .. 4266324 -  -4.3  -3.60072   CAAAACAAATATCAA            TACTGCC GCCACA AGCAGTA             AAAAAAATACGACCA  54 87
LOY45_RS19565 NONE
LOY45_RS19560 4263213 .. 4263224 -  -4.4  -3.73336   ACTCCAACTTAATAA                TCGT AAAA ACGA                 GTCAAATTCCACACG  57 197
        wbpA 4261839 .. 4261863 - -18.7  -3.23274   CCTTTCATAATCGAA          GCCGGAAGACA CTC TGTCTTCCGGC          GAAATCAGTTAAATT  95 39
        wbpB 4260831 .. 4260855 - -15.7  -2.53164   GCAGGCATCAGCAAC          CTGGGCAGCGC TTT ACGCCGCCCAG          CCTTTTCAATTCAAA  81 36
LOY45_RS19545 NONE
LOY45_RS19540 NONE
LOY45_RS19535 4257239 .. 4257254 -  -3.2  -2.78463   AGTTTCGCGATCACA              CTTGAG CTTC CGCAAG               CACATCAACAATCAG  41 5
LOY45_RS19530 NONE
LOY45_RS19525 NONE
LOY45_RS19520 NONE
LOY45_RS19515 4252453 .. 4252469 -    -3  -3.76186   CACCCAGAAAATCAA             CCATAGG CGAT CCT-TGG              ACACAAGCCAGGATA  53 205
LOY45_RS19510 NONE
LOY45_RS19505 NONE
LOY45_RS19500 4249426 .. 4249436 -  -8.2  -4.54727   GTGGTTAAACCAAAA                 GGCG CGT CGCC                 ATGCGGCGATAGTCT  82 4
LOY45_RS19495 4248251 .. 4248271 -  -3.4   -3.4285   TTACCTAATCCATAA           TC-GATGAT CGTG ATCATCTGA            ACAGCCTTCTTTCCA  48 18
        hisH NONE
LOY45_RS19485 NONE
LOY45_RS19480 NONE
LOY45_RS19475 NONE
        wecB NONE
LOY45_RS19465 NONE
LOY45_RS19460 4241581 .. 4241593 -  -4.7  -3.54903   AGAGAAAAGTTACAA                GGCCC ATG GCGCC                GACTCGTCGAGGTCT  54 90
LOY45_RS19455 NONE
LOY45_RS19450 4238044 .. 4238078 -  -5.7  -3.92592   ATTCCGAAGAGCAAA    TCCTGATACGCCCCCA TCAT TAGGGGCGC-TCCGAA     GAGCGGGCAGCCGTT  64 59
LOY45_RS19430 4235152 .. 4235174 - -11.3  -4.61231   TGATACCGCGAAAAA           GCTGCCCCT GACCG AGGAGCAGC           TTAAACGTGTGCATG  93 115
        pyrF 4234066 .. 4234090 -   -10  -3.06815   AGGCGGCGCAAGAGA          TCGCCGGCTG GCTGG CAACCGGCAA          GGTGAAGAGCAAGGA  63 121
LOY45_RS19410 4231999 .. 4232014 -    -6  -5.14563   CCGGTGAGGAAAAAA              CCCGCG CCAG CGCCGG               CTTCTTCCTCTTGGC  90 211
LOY45_RS19400 4229536 .. 4229551 -  -8.2  -2.78384   GTCGTTTTCAGGACA              GCCGAG GTCG CCCGGC               GCGCTGGAAGAACGT  57 2
LOY45_RS19395 4227438 .. 4227448 -  -3.2  -3.64822   ATCGGCGTAGGCAAA                 TCGC GGG GCAA                 GTCGGGGCACCCCAG  50 49
LOY45_RS19385 4225018 .. 4225034 - -11.5  -4.09739   CGAATTCCGCGAAAA              CGCCGCG ACC CGCAGCG              AGTTTCTCAGCCTGA  86 481
        prmB 4221667 .. 4221724 - -38.2  -3.35542   CTCACCGCTAAAAAG CATCGCTGGCAAGCCAGCTCCCACAA GGGCAA TTGTGGGAGCTGGCTTGCCAGCGATA GATTCACTGCAAACC 100 48
        aroC 4218523 .. 4218554 - -15.2  -3.09516   GCCGCCAGTAGGGAA      TCGGCGCCACGGCTC AGC GAGCCGCAGCG-CGA      ATGGCAGGTGCCAGC  83 42
LOY45_RS19335 NONE
LOY45_RS19330 4216341 .. 4216351 -  -5.4  -4.15565   GGCAGCACTGCAAAA                 TGCA CTG TGCA                 AAATGCACGACCATG  64 503
LOY45_RS19320 NONE
LOY45_RS19315 4214638 .. 4214672 -  -4.9  -3.95022   CGCACGAACACGAAA    GCACCGGCCCG--TGCG GCC CGCAGGCGGACCGGATC    AACCGGGTGTGGCTG  62 460
LOY45_RS19305 4213472 .. 4213500 -  -8.9  -3.14564   GCAGCCGGCCAGCAA       CCAGCTGG-ACG ATGTGG CGCGCCAGCTGG        ACCAGTACTTTGCCC  57 373
LOY45_RS19295 4211031 .. 4211060 -  -9.9  -4.85599   TCCATGGCACAAAAA       GCCAAGACCCCGG CAAG CCGGGGTCCTGTT        TACAGCGCTAGCAAC 100 45
LOY45_RS19290 NONE
LOY45_RS19285 4209250 .. 4209269 -  -2.8  -4.41137   GACAATCAGAAGAAA            CTGCCCGAC CTT GTCTG-CAG            CGTAGCGCCTGATTG  64 63
LOY45_RS19280 4208676 .. 4208700 -  -7.1  -3.73068   GTTTTAAGCGAAGAA          CGGCCGCAC CAGATCT GTGCAACCG          CCCCGGTTGCTTTGA  63 113
LOY45_RS19275 NONE
LOY45_RS19270 NONE
LOY45_RS19265 4205302 .. 4205323 -  -6.5  -3.57144   TCCGTGACCCGCAAA           GCCT-GCGCC AGT GGCCCCAGGC           GAAGATGCCCGGGTT  59 123
LOY45_RS19255 4202892 .. 4202929 -  -5.5  -3.23853   TTCGCTCAAGGAAGA   GGACATC-CAGCGCATCC ACA GCCTGCGCCGCGACATCC   TGCGCCTGCGCCGCT  51 436
LOY45_RS19235 4200341 .. 4200367 - -15.1  -5.45802   TGGGCAAAACAAAAA         GCCCCCGGCCT TGTTC AGGTCGGGGGC         TTTTCTAGATGTGGC 100 37
LOY45_RS19230 4199448 .. 4199460 -  -6.2  -3.29461   TAACGTCTTCGACAA                GCGC TACTG GCGC                GATGCCGGCGAGTAT  51 357
LOY45_RS19215 4194853 .. 4194870 - -14.1  -4.82901   CCCGCCTCAGAAAAA             GCGGCGC ATGA GCGCCGC              CCTTTCAGGTTGCTA 100 41
LOY45_RS19210 4194436 .. 4194449 -  -2.3  -4.58395   TCTATCCCTGAAAAA               TCGGC AATT GCCTA                CAAGGTTTTATTATT  65 36
LOY45_RS19205 NONE
LOY45_RS19200 NONE
LOY45_RS19195 4189991 .. 4190013 -  -8.3  -3.28712   TGGGGCCTGGCAGAA           CGCCAGCGC GTCTT GCGCCTGCG           CACCGCCTAACGGCG  62 32
LOY45_RS19185 4187361 .. 4187376 -    -6  -3.61715   CATCCTGGTCAACAA              CGCCGG AGTA CTGGCG               GTGGGGCCGCTTGCG  57 485
LOY45_RS19175 4185608 .. 4185626 -  -5.8  -3.76224   GGCGCATGGAGGAAA             TCCGCCAG GCG CGGGCGGC             GTACCAGCAGTTGTT  60 423
        earP NONE
LOY45_RS19155 4183107 .. 4183122 - -11.8  -5.64274   CCAGGCATAAAAAAA              CCCGGC CAAG GCCGGG               TTTTTCGATTTCGCA 100 53
LOY45_RS19135 4180144 .. 4180165 - -11.6  -2.61681   GCGCAATCGCACAAC           GCAGTCGG AAATGA CCGACTGC            CTGGCCGACTACATC  62 51
LOY45_RS19125 4178995 .. 4179018 -    -3  -2.64735   AGCCCACTTACATTA          GTCGTGGCAC TTCG ATGACGCGAC           TCATTTTCTCAGCGG  40 26
LOY45_RS19120 4177588 .. 4177610 -  -9.1  -4.40804   GATGACCGGACAAAA           CGTCACCGA GTGCA TCGGTGGCG           CGCGACCGATCACCG  83 134
LOY45_RS19110 4175289 .. 4175303 - -11.4  -2.92246   GGAACGTCAAGGAGA               GTCCGC GAT GCGGAC               GCGCAGCCGAAGCTG  70 229
LOY45_RS19095 4171070 .. 4171087 - -12.7  -5.24531   ACCCGCTACAAAAAA             GGGCGAC TTCG GTCGCCC              TTTTGCATTTCAGCG 100 35
        msrB NONE
LOY45_RS19075 4167482 .. 4167519 -  -8.4  -3.15663   ATGGACGGTTATGAA  GCCAGCCGGCGGATCCGC CAGA GCGGA-C-GCTGGCCAGC   CCTGCCGATCGTCGC  57 169
LOY45_RS19065 NONE
LOY45_RS19060 4163532 .. 4163554 -  -4.7  -3.65812   GGCGCTGCAACAGAA           CCAGCCGGG GCATG CGCGCCTGG           CGTTCGAGCGTGGCG  55 329
LOY45_RS19050 NONE
LOY45_RS19045 4162414 .. 4162426 -  -7.7  -3.56092   GGACGACGCCCGAAA                CATGC AAT GCATG                CTTCAGTTACCAACT  63 105
LOY45_RS19040 4162327 .. 4162348 -  -4.3   -5.0133   TATTCCCGCAAAAAA           TGGCGTCCC CTAG GGGACTCGA            ACCCCTGTTACCGCC  81 4
LOY45_RS19035 4162186 .. 4162203 -  -7.7  -3.64283   TAAACCCGGCAAGAA             CAAGCGC TGTT GCACTTG              CTCCATCACTACAGC  63 67
LOY45_RS19030 4162047 .. 4162066 - -13.6  -5.90981   CGAGACGAAAAAAAA            CGCCGTTC AAAC GAACGGCG             TTTCTTTATTTGGAG 100 36
LOY45_RS19015 4158195 .. 4158206 -    -3  -2.68823   TCCGTGCCAGACAAG                TACA GTCA TGTA                 TATCGATAATAACTA  40 59
LOY45_RS19010 NONE
LOY45_RS19005 4156105 .. 4156149 -  -2.1  -3.01712   TGGTGCGCGGCAACA TGCCGATCGCGGTCAGCCTG GTGTGG CTGACCAACC-CGATCACCA TGCCGCCGGTGTTCT  41 268
LOY45_RS18995 4153485 .. 4153500 -  -2.4  -2.79796   CGCCACTTTACCATA              GGACCC CAGG GGGCTC               ATCTGCCGAAGGTCG  39 41
LOY45_RS18990 NONE
LOY45_RS18985 4152378 .. 4152400 -  -4.1  -4.11394   AGGCGATCGGCAAAA          GCCATCAGGG TGTC CCCTGA-GCC           GCCTCGACCGTGGTC  60 7
        lpxK 4151339 .. 4151363 -  -7.1  -3.64703   TGGTGTCCATGGAAA          TTCCTCAGGCC AGT GGCCGGAAAAA          GAAACGAATCAGGAG  60 34
LOY45_RS18975 NONE
        kdsB 4150381 .. 4150391 -  -4.6  -4.75472   GGCACACGAACAAAA                 CCCG CAT CAGG                 CCTCCAGCAAGCGCC  74 21
LOY45_RS18965 NONE
        murB 4148763 .. 4148786 - -19.6  -5.03314   TCCAGGCTGAAAAAA          GCCCCGCCAG GTAA CTGGCGGGGC           TTTTTTATGGCCTGT 100 146
        rluC 4143899 .. 4143913 -  -2.1  -2.74741   AGCAGATCGTAATCA              CG-CTG CACT CAGGCG               CTCCACGGTCTTGGC  39 8
LOY45_RS18945 NONE
LOY45_RS18940 4142198 .. 4142217 - -10.7  -5.42975   CTACACAAATAAAAA            GCCGACC TCGAAG GGTCGGC             TTTTTCAATGCACCA 100 46
LOY45_RS18930 NONE
        rpmF NONE
        plsX 4139630 .. 4139652 -  -9.1  -4.41348   GTCGTCGGAAATAAA           GCGCCCAGC ACCAG GCTGAGCAC           AAGAAACTGAAGAGT  81 95
        fabD NONE
        fabG NONE
        acpP 4137405 .. 4137429 -  -9.3  -5.63517   CTTGTAAAGAAAAAA         CCGCAC-GCC GGCGAA GGCAGTGCGG          TTTTTCCATGACAAG 100 60
        fabF NONE
        pabC 4135301 .. 4135311 -  -2.4  -2.91924   TTACGTCTCACAAAT                 CAGG TAT CCAG                 TAGCGTACGGGCAAT  41 14
        mltG NONE
         tmk NONE
LOY45_RS18880 4132511 .. 4132533 -  -4.7  -3.48498   AAAGTAATGAAGGAA           CGGCGCAGC TCAAC GCTGGCCCG           GCAACATCGCCCAGG  52 12
LOY45_RS18875 4131583 .. 4131603 -  -4.5  -3.85698   TGTGGCGCCGATAAA            GGTGCTCAG GGA CCGCGCGCC            TTTGTTTTACTCCTA  57 116
LOY45_RS18865 4129520 .. 4129537 -  -6.3  -4.07687   ATCGGGCCTGCAAAA             CCTGACT CAAA AATCAGG              TTTTTGCAAGCCTCA  66 99
LOY45_RS18860 4128477 .. 4128512 -  -6.2  -4.18018   GCCGGTGACGGAAAA    CCGGCG-AACAGCTG GCAGATG CAGCTTTTGCGCCAG    TCTTAGCCGCCAATG  66 28
LOY45_RS18855 NONE
LOY45_RS18850 4127192 .. 4127217 - -10.5   -4.6856   CAAACACCTGAAAAA         CCTCCAGTTGCC CTG AGCA-CTGGAGG         TTTTTTCGTTTCCGA  95 77
        uvrB 4123458 .. 4123496 -  -7.6  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACA-GGT-ATGT CATTC ACAGGACCATGTGGGAGC  TGGCTTGCCAGCGAT  53 48
        gltX 4119106 .. 4119120 - -12.8  -2.81966   TGAAACCCCATGAGA               GCCGGC CTT GCCGGC               GATGCAGACACCGCG  74 106
LOY45_RS18815 4118764 .. 4118782 -  -2.3  -3.16564   TTCTTACCTTACCAA             CCCGGTC GCTGG AACCCGG             TTGATTTCGCAGTCA  42 66
LOY45_RS18810 4118667 .. 4118690 -    -3  -4.07568   GTCGCTTGTGTAAAA          CTGGCGTCCC CTAG GGGACTCGAA           CCCCTGTTACCGCCG  58 3
LOY45_RS18805 4118485 .. 4118506 -    -3  -2.79796   TCCTAGGCCACTAGA           CGAAGG GGACTTGTAA CCTTCG            TGCAGATCCGTTTTC  41 58
LOY45_RS18800 4118369 .. 4118393 - -13.7  -5.38839   GAGACAAAAACAAAA          GGCTCATTCAA TAA TCGAATGAGCC          TTGAAATCCCACAAA 100 51
LOY45_RS18795 4117711 .. 4117725 -  -8.5  -3.48276   GCGTGGTTCAGACAA               CCGCC GATTT GGCGG               CGCGCAGAATGCGGT  64 3
LOY45_RS18790 4116796 .. 4116825 -  -4.3  -2.52896   CCAGGTCCCAACTCA       TGCCCGCTC CAGATCCGTGGT GAACGGGCA        GAGTGTACCGGATGC  43 41
LOY45_RS18785 NONE
LOY45_RS18780 NONE
LOY45_RS18775 4114750 .. 4114767 - -12.7  -5.66338   AAAGACAATAAAAAA             GGGCACC CGAA GGTGCCC              TCATCAACATCAACC 100 43
        leuC NONE
        leuD 4107949 .. 4107979 - -11.8  -2.52543   ATCGCTGGCAAGCCA       GCTCCCACACAGGC TGA GCACCTGTGGGAGC       CGGTCTTGCCGGCGA  70 67
LOY45_RS18750 4107118 .. 4107142 -    -7  -3.19192   CTCTATTCAATTCAA          GCGGCACGCC CTGTT GGCCTGCCGG          AAAAAACCTAGCGTT  54 33
        leuB 4105954 .. 4105971 -  -4.9  -2.73364   GTTTCATCGCAACTA             CACCTTT GCTA AAAAGTG              GGCCGCTGCTTCACA  44 68
         asd 4104786 .. 4104809 - -18.2  -5.45652   AGGGCCAACAAAAAA          GCCCGTGCTG TTTC CAGCACGGGC           TTCAGTTCAACGCTG 100 49
LOY45_RS18735 NONE
LOY45_RS18730 4100752 .. 4100772 -   -14  -3.58854   GAATTATAACGACAA            CGGCAGCC ACTGG GGCTGCCG            TCGGCCATGCAAGAA  86 47
        truA 4099836 .. 4099854 -  -4.4  -2.84602   CGGATGTTAGCAAAT             GGCTTGCG GGC CGTCAGCC             CGTCAATGTCTCGTA  44 20
LOY45_RS18720 4098906 .. 4098940 -  -2.9  -3.14132   TTCTTTCTCCAGTAA    CG-GCGA-CCGACAG GTTATGG CTGCCAGCTCGCGCG    TATGCCCTTGAGCTC  43 252
        accD NONE
        folC NONE
LOY45_RS18705 4095907 .. 4095919 -  -3.3  -2.79878   TCGACCCAGGTAAAT                GCCAC AGT GTTGC                CTGCAAACGGATAAG  41 117
LOY45_RS18700 NONE
        purF NONE
LOY45_RS18690 4092588 .. 4092606 -  -3.8  -2.80113   GACCAGTCGATCACA            GCGCCGC CAGCCC GCGG-GC             CAGATCGGCCTTGAG  43 2
LOY45_RS18685 4091743 .. 4091762 -    -5  -5.44119   CTGAGGTGAAAAAAA            CAGCTTCA AGCT TCAAGCTG             CAAGCCACAAGAAAA  90 76
LOY45_RS18680 4091538 .. 4091551 -  -3.1  -3.01712   TCCTCTCTGGTAACA               CCTTC TTGC GAAAG                TGTCGGGTCAGGAAC  42 52
LOY45_RS18675 4091398 .. 4091412 -  -7.8  -3.66178   CCTTGGAACCTCAAA               CCGGTC GTT GACCGA               TCTGGAGAATAGTGG  63 38
LOY45_RS18670 4091192 .. 4091206 -  -7.8  -5.60993   CCGGGCACAAAAAAA               GCAACC TCA GGTCGC               TCTCTTTGTTGCTTC  95 69
LOY45_RS18665 4091027 .. 4091042 - -10.4  -5.64274   TCAGGCACAAAAAAA              GCGACC CGCA GGTCGC               TTTCTTTGTTACTTC 100 45
LOY45_RS18660 4089794 .. 4089823 - -10.7  -2.90615   AGGCTGCCGAAATGA       TGCACGCCAACCAG CAG CAGGTCGGCG-GCA       CGGTAGCATTGGCCA  60 297
LOY45_RS18650 4087366 .. 4087410 -  -7.1  -4.26076   TGACGCTTATCAAAA CAACGTAGCAGGGACTGCTG AATTTA CAGCGGCGCCTGCC-CGCTG CTGCTGGCCGGTGCT  71 4
LOY45_RS18635 4082754 .. 4082781 - -14.8  -3.06162   CAGCGCAGTGTAACA        GCGCAACGGGCC CGGC AGCCCGCCGCGC         TGCGCCAGTCAGAGC  83 34
LOY45_RS18630 4081528 .. 4081554 - -12.2  -2.87132   CCGGCCTGGCAGACA         GGCCTGGCGCAC CTG ATGCACCTGGCC         CTGTACCTGCTGATG  66 283
LOY45_RS18620 4079368 .. 4079383 -  -6.8  -3.90112   CGGCCCGCAACGAAA              GCC-GCG AAG CGCTGGC              GGCGCTGGAGATCGA  64 450
LOY45_RS18610 NONE
LOY45_RS18605 NONE
LOY45_RS18600 NONE
LOY45_RS18595 NONE
LOY45_RS18590 NONE
        pepN 4072126 .. 4072164 -  -7.4  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAGGG-TCGG TACATG CAGTTCCCTGTGGAAGC   GGGCTTGACCCGCGA  53 49
LOY45_RS18580 NONE
LOY45_RS18575 4068392 .. 4068450 - -24.8  -3.14962   CGATCATCAAAAGCA TCGCCGGCAAGACCGGCTCCCACAGGTA ATGCG CACCTGAGGGAGCCGGCCTTGCCGGC-- GATGGACTACGAAGT 100 61
LOY45_RS18570 NONE
LOY45_RS18565 4066891 .. 4066906 - -11.8  -2.64155   CGTGGTTCAAACTTA              CGCCGC TGGC GCGGCG               CACAGAAATTCATTG  70 72
LOY45_RS18560 4066443 .. 4066483 - -11.9  -2.52543   ATCGCTGGCAAGCCA GCTCCCA-CAGGGGCCTG GGCATG CAGGGCCATGGTGGGAGC  TGGCTTGCCAGCGAT  70 194
LOY45_RS18490 4044767 .. 4044800 - -13.3  -3.68244   AGTAGCAAGCTGAAA     GCTGCAAGCGGAA-AC AAC GCATTCCACTTGCAGC     TTGTAGCTTAAAGCT  84 47
        ppsA 4041205 .. 4041232 - -11.2  -5.24129   TTCTTGCACAAAAAA        GGGCGAGGTCCA TCAC TGGAACACGCCC         TGGAATACGGTCGGA 100 86
LOY45_RS18475 4040006 .. 4040026 -  -2.5  -2.76969   TAATGCATGGGAAAC            TCCTGTCGA TTA TCGAGACGA            TGAATGTCGCAGTTT  39 195
        rraA NONE
LOY45_RS18465 4038431 .. 4038446 -  -4.6  -3.48593   GAGGTCGCCACACAA              CGGGTC ACAT GAACCG               GCCAGGCAGTTTGTG  52 65
LOY45_RS18460 NONE
LOY45_RS18455 NONE
        sigX 4036528 .. 4036541 -  -2.3  -3.55563   ATTTCATCCGTTAAA               TCCCC ATCT GGTGA                TAGTTAAGCAGTCCC  48 114
LOY45_RS18445 4035437 .. 4035464 -   -20  -3.66874   TGAATCGCAGGCAAA        GAAAAGCCCGGC CTAG GCCGGGCTTTTC         AGTAGGGCTTAGACC 100 43
LOY45_RS18415 4028926 .. 4028940 -  -5.6  -2.82516   GGGTGCAGCACCAGA               TCAGCC CAC GGCTGT               CGAAACGCGCCACCC  47 44
        sctC NONE
        sctW NONE
LOY45_RS18400 NONE
LOY45_RS18395 4023324 .. 4023363 -  -5.6  -4.56597   CGGCCGCCGCAAAAA  TACCCACCCGCTGACCGAC GCC GCAGGTCAGCAGG-GTGTC  AATCACGCGGATCGC  73 451
LOY45_RS18385 NONE
LOY45_RS18380 4021428 .. 4021438 -  -3.2  -3.05849   CGCACCAAAGCAAAT                 CCGT AGG ACGA                 CGTAGGACTATTCAG  43 33
LOY45_RS18375 4020500 .. 4020513 -  -3.8  -4.86001   AGCACTCTAGAAAAA               CGTG ACCAAG CACG                AACAGAGCAAAGCCT  76 39
LOY45_RS18370 NONE
        sctF 4018865 .. 4018886 -  -2.9  -2.78384   GGGTTGGCGATTATA           GCCG-GGTGA CCA CCACTTCGGC           GAGTTCGCCGGGTTG  41 223
LOY45_RS18360 4017414 .. 4017434 -  -9.7  -3.61178   GGCAGCGAGCGCAAA            CCGGCAGAA CGA TTCTGCCCG            ACCTTCTAGAGGTCG  72 390
       rlmKL 4014662 .. 4014676 -  -5.6  -4.26681   AGAAAGCACTCAAAA               CGCCAG CGT CCAGCG               GATCGCAGGCTCTGA  67 98
LOY45_RS18345 4011876 .. 4011898 - -11.9  -4.21194   CCTGATCATGGAAAA           CGGCTCGGG CCTGT CCCGCGCCG           AACGGGTCAGCACCC  95 380
LOY45_RS18335 4010191 .. 4010211 - -15.4  -4.54727   GGGCTGAAACGAAAA            CGGCGGCC ACTGG GGCCGCCG            TTTCATCGGAATCAG 100 37
LOY45_RS18300 4000813 .. 4000841 - -10.2  -2.78816   GCACCCGCGACGACA        GCCAGCGCGACG AATTG CGTGCCGCTGGC        GCCACTGCCGTGGTC  60 450
LOY45_RS18290 3998841 .. 3998854 -  -2.3  -2.62616   GGATTGTCCACATCA               GCTCA GCAT TGCGC                ACGACGGGAAAGATA  38 59
LOY45_RS18285 3998332 .. 3998345 -  -2.3  -2.93858   CAGCATATTCAGAGA               TGTCG TCTG CGTCA                ATCAGACTGCATCTG  41 41
LOY45_RS18280 NONE
LOY45_RS18275 3996764 .. 3996794 -  -7.7  -3.10164   GTAGGTATCAGCGAA      GCTGTGGCCAATATC ACC GACA-TGGCCAC-GC      AAATTGCCGCTGCCA  55 250
        rlmM 3989916 .. 3989933 -  -3.4  -3.79113   AGCGCCTTACAACAA             CGATAG TGGTAG CCATCG              AGGGCACCGCCAGAT  54 324
        tusA 3988677 .. 3988690 -  -2.4  -3.25204   GCAGCGCCAAACACA               TTCG CCGGGC CGAA                AAGCGCTAGTCGAAC  44 31
        pdxB 3985935 .. 3985951 -  -2.1  -5.03715   AGGAGCTGGAAAAAA              GCCGGGT AGA ACTCGCC              AAGAAAGACTGACCC  75 91
LOY45_RS18225 3983638 .. 3983659 - -10.9  -5.78622   GCAGGCCAAAAAAAA           GCTGCCATC GATC GATAGCAGC            CAGGTTCGAGCATTA 100 106
LOY45_RS18220 3981859 .. 3981898 - -10.9  -3.29511   TTTAGCTGGCGACAA TCCGCCACATTGCCAGCCT CAGG ACGCTGG-A-TGTGGCGGA  TTTCCCCCTTTTTTG  70 42
         mqo 3979893 .. 3979922 - -19.5  -3.85698   TTGGCGGGCCAGAAA       CAAACAAGCCCCT GAAC AGGGGCTTGTTTG        TTTCCAGCAAAGCGA 100 45
        moaB NONE
LOY45_RS18190 3976899 .. 3976912 -  -3.7  -3.57144   CTGCCCAGCTGGAAA               GCGTG CATG CGCGC                CCCAGCTTGCGTGCG  53 83
        yegS 3972939 .. 3972957 -  -4.4   -3.5594   AATCGACGCGGGAAA             TCGCCCAG GGC CTGGGCCT             GAGCATCAAGACTGT  53 127
LOY45_RS18155 NONE
LOY45_RS18150 3968320 .. 3968336 -  -7.9  -2.70932   GCGTTGTCCGAATGA              CGACCGC TTC GCGCTCG              ATCGCCGGCAAGTCC  53 127
LOY45_RS18140 3964078 .. 3964095 -  -4.1  -5.24129   CGCCTGCAGAAAAAA             GCC-GAGT AAA ACCCTGGC             GGGCCCGGCGCAGAT  83 62
LOY45_RS18130 3962842 .. 3962859 -  -3.3    -4.323   GTCAAATACCCAAAA             GCTGCGT GAAA ACGCGAC              TTTCCGGTCATTTTT  61 262
        fadB NONE
        fadA 3959221 .. 3959239 - -13.1  -5.61881   CTGCAAAAACAAAAA             CCGGGGC ACCAG GCCCCGG             TTTCCATCCAGCGAA 100 44
LOY45_RS18115 3958861 .. 3958880 -  -5.6  -5.48213   TACTGAAAATAAAAA            CACGGCAG GTAC CTGACGCG             GCACCGCTATATATA  90 72
        topA NONE
LOY45_RS18105 3955469 .. 3955487 -  -8.8  -3.72576   CTGTTCTCCACGAAA             GGCCGGCA TTG TACCAGCC             ACCGCCCCAATCAGC  71 36
LOY45_RS18100 3954751 .. 3954785 -  -2.1  -4.65895   GCCCGGACTGAAAAA    CGCCAAGCCTGCGCC CCACCCC GGCGC-GGCCCAG-G    TTTTCAGCGAGCTGT  70 454
LOY45_RS18085 NONE
LOY45_RS18080 NONE
        nagZ 3951422 .. 3951474 - -39.5  -2.52464   TGCGCGGTGAATCCA TCGCTGGCAAGCCAGCTCCCACACG GAC CCTGTGGGAGCTGGCTTGCCAGCGA TGGGCTGCAACGCAG 100 49
LOY45_RS18055 3943082 .. 3943101 - -13.6  -5.81412   TTCAGGCAAAAAAAA            CGGGAACC CTGA GGTTCCCG             TCTTTCACGACCAAG 100 47
LOY45_RS18050 3941794 .. 3941826 - -13.3  -3.29511   CGTACTCCTTCAGAA      CAGGCCCGCGCGCCA CAT CGGCGGGCGGGGCTA      CCTCATGTCGCCAGC  81 250
        sthA 3940244 .. 3940269 - -16.1  -3.12351   GGTGTGGACAGTCAA         CGAGCCGGCGC TGAT GCGCAGGCTCG          CCGACTTCGGCGTAG  82 139
LOY45_RS18030 3937667 .. 3937679 -  -3.3   -3.3785   CCAACTCACTCATAA                CGTAG CGC CTCCG                CAGGCTGGGTGCGTG  46 3
        lolD 3936925 .. 3936956 - -11.5  -4.96996   GGTAAAGAAAAGAAA      CCAGGTGCCCGCC TAACCC GGCGGGCACATTG       CGCGGGCCGTCAGAT 100 35
LOY45_RS18020 NONE
LOY45_RS18005 NONE
        queF 3931958 .. 3931977 - -11.4  -5.46657   CACCTGAATAAAAAA            GCCCCGTC ATCG AACGGGGC             TTTTTCGTTACTGGC 100 33
LOY45_RS17985 3930061 .. 3930078 - -12.7   -5.4251   TGCAGACACAAAAAA             GGCGACC TGAA GGTCGCC              TTTTGCTTGCCCGCC 100 45
LOY45_RS17975 NONE
LOY45_RS17970 3927801 .. 3927831 -  -8.3  -3.41051   TGACCGGCACCAGAA      CG-GCGC-CCTGGTC GGT GATCAGGTGCGCTCG      AGGGCGTTGACCAGG  64 13
LOY45_RS17950 3922659 .. 3922675 -  -3.6  -4.39386   CGTAAACGAGCAAAA              TCCCCA GGCGG TGGGGT              TTTATCTGCATTACG  66 173
LOY45_RS17940 3921350 .. 3921366 - -10.8   -4.7497   GCCAGGCATGAAAAA              CCCCGC TTGGG GCGGGG              TTTGGTCTGGCGTTG  95 45
LOY45_RS17935 3919965 .. 3919975 -  -2.4  -3.13371   TACCTCATGAATAGA                 GCGG CTT CAGC                 TATAGCGATATGGAA  42 48
LOY45_RS17930 NONE
LOY45_RS17925 3916247 .. 3916265 -  -6.6  -2.72661   CACCATCCCCAACCA             GTCCTCGG TAC CCAAGGCC             TGGCTGGAGTTTGAC  48 314
LOY45_RS17905 3913644 .. 3913662 - -10.2  -3.07816   GTGCTACGCACTTAA             TCGCTGGC AAG GCCAGCGC             CCACAGGGGTAGCAG  68 103
LOY45_RS17890 3910703 .. 3910713 -  -2.4  -2.76162   GAGCTCATGGGAAAT                 CTCC TTC GGGG                 GTTAACGAAAGCGCG  39 27
LOY45_RS17885 NONE
LOY45_RS17880 3909141 .. 3909166 - -15.5  -3.93256   GACACGCGTAAACAA         CAAAGGGGCCA TTTG CGGCCCCTTTG          CTTTACCCCTCCCCG 100 41
LOY45_RS17865 3905271 .. 3905295 -  -7.7  -4.21275   GCAAGCCAGTGAAAA          GCTCGGCGCCA CCC TGGCGCCACGG          GGCATTGCCAGCGCA  75 341
LOY45_RS17825 NONE
LOY45_RS17820 NONE
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC NONE
LOY45_RS17790 NONE
LOY45_RS17785 3887886 .. 3887910 -  -4.8  -3.87815   TTCGAGTTCTACAAA          GCGCCGGAGC TGATT GCCCTGGGGC          GGGAGATTGCCCGGG  60 185
LOY45_RS17775 NONE
LOY45_RS17770 3885642 .. 3885655 -  -3.1  -4.67048   CGATTTGAAAAGAAA               CTGAT CTTA ACCAG                CCAGCAAGTGGTCTA  67 69
LOY45_RS17765 3884345 .. 3884355 -  -8.2  -3.73068   CGGCGAACTGAACAA                 GGCC ATC GGCC                 AGCTCAAGCTATAGG  69 485
LOY45_RS17745 3880379 .. 3880393 -  -8.6  -4.46404   CAACCAATAGTAAAA               TCGCAA TAT TTGCGA               TATTAAAATCGAATT  79 47
LOY45_RS17740 3879833 .. 3879857 - -20.1  -3.63968   CCGTAAAGGCGCAAA          GGTGAGGCAGC AGC GCTGCCTCACC          CGGATCGACCCAACC 100 41
LOY45_RS17735 3878889 .. 3878903 -  -3.4  -3.84389   GATGGAAGAACAGAA               CGCCGA GAT CCTGCG               CAGCCTCAACGCCCG  56 279
        greB 3876995 .. 3877010 -  -3.2  -3.14931   GCGACCCTCGACGAA              CGCATT CGCC AAGGCG               CCCTGCTCCGCGCCC  43 304
LOY45_RS17710 NONE
LOY45_RS17705 NONE
LOY45_RS17700 3872011 .. 3872036 - -16.2  -3.02632   CAACGCCAGAAACGA         CGAGGCCTGC ACGATG GCAGGCCTCG          GGTATAGCAGGAATG  83 43
LOY45_RS17690 3870810 .. 3870829 - -16.4  -3.93398   AGGCAGATACAACAA            CGCCGGGC AATT GCCCGGCG             TTTTTGTTGGTGCGT 100 76
LOY45_RS17675 NONE
LOY45_RS17670 3867035 .. 3867059 -  -4.8  -3.63991   TAGCAGCGCCAAGAA          CCGTCGCAGG GCCGT CCGGCGCCGA          GGTTTACCCGTTAGC  54 36
LOY45_RS17665 NONE
        cysB 3865335 .. 3865350 - -11.8  -5.63504   AATCGCACAAAAAAA              CGCCCC AAAA GGGGCG               TTTTCTGAACATCGG 100 56
LOY45_RS17655 3864578 .. 3864622 - -15.2  -3.12351   TTTTTTCACAGGCAA TACTCACCCCGC-ACTCGTTC GAAC GAATGAGCAGCGGGGTGAATA GAAGGGGATGGAACA  83 57
LOY45_RS17650 3861829 .. 3861852 -    -8  -3.97368   GGCGCAAGGCACAAA          CCCCGAGCAG AATT CCGCCCGCGG           CGTGGTGTTGACGAA  71 199
LOY45_RS17645 3860747 .. 3860759 -  -4.7  -3.20858   GACGAGACCGAGCAA                CCGGC AGG GCCCG                TAGGAAACGTCCTGA  47 81
LOY45_RS17640 NONE
LOY45_RS17635 3859290 .. 3859302 -  -3.3  -2.84878   TTCGGCAACCTAAAC                GAGCA GGT TGCGC                TTGGCGACATCCGCC  41 7
LOY45_RS17630 3857355 .. 3857373 -  -5.9  -3.43117   AGAGTCAACCCAGAA             GGAGTGC GGGCT GCACGCC             GGCAACCTGATCACC  56 36
        thrH 3855845 .. 3855903 - -18.6  -3.08776   AAGTCTCTAAAAGCA TCGCTGGCAAGCCAGCTCCCACAGGTT GGGTGGTG AACCTGTGGGAGCTGGCTTGCCAG--- CGATGAGGCCCCTAC  95 37
LOY45_RS17595 NONE
        prpB NONE
        prpC 3848185 .. 3848204 -    -5  -3.28712   GGCCGGCTCCCACAA            CAGCAC AAGCTCCA GTGCTG             GCCCAGTGAGCCAGT  52 42
        acnD 3845424 .. 3845436 -  -3.3  -2.87931   GCCAGCTCCCACAGA                GGGCA AGT TGCCT                GTACCTCAACCCATC  41 39
        prpF NONE
        prpD 3842534 .. 3842548 - -12.8  -3.68738   TACCTCAAGACACAA               GCCGGC GTT GCCGGC               GATGAGGCCCTTCAG  81 37
LOY45_RS17565 3841284 .. 3841303 - -16.4  -5.42259   TTAGCGTGAAAAAAA            GCCCCGCC AATT GGCGGGGC             TTTTTATTGGGCCTG 100 119
LOY45_RS17555 3837676 .. 3837690 -  -4.2  -3.89614   CGGAACTGGCACAAA               GCTGAG GGC CTCATC               GCTGGCAAGCCAGCT  59 114
LOY45_RS17545 3835926 .. 3835944 - -10.2   -4.4648   ATTTTCACGACAAAA             GGGGCTGC GTC GCAGCCCA             TCGCCGGCAACGCCT  88 134
LOY45_RS17540 NONE
LOY45_RS17535 NONE
LOY45_RS17530 NONE
LOY45_RS17525 3830703 .. 3830720 -  -6.9  -4.34402   TGGCCTACATGAAAA             TGCGCCG TTAC CTGCGCA              ATCCGCTGAGCCTGT  75 453
LOY45_RS17510 NONE
        cysS 3826058 .. 3826086 -  -2.3  -3.03771   GGAGATGCCCGAACA       GCTACCGG-CGC TGCATG GCGACCGCGAGC        TGCTGTTCGAGGCAC  41 430
LOY45_RS17485 3822099 .. 3822134 - -13.3  -3.14878   CGGCTCAAGGCAACA    CTGG-CCGGGGTGCTG TACCG CGACACCCCGGTCCAG    TTGTTATTGCTCGAC  72 188
LOY45_RS17410 NONE
LOY45_RS17405 NONE
LOY45_RS17400 3810027 .. 3810078 -   -13  -2.52543   ATCGCTGGCAAGCCA GCTCCCACAGGCCCTGCACCATTC CTGA GAACAGCGGCAAACCTGTGGGAGC TGGCCTTGCCAGCGA  72 66
LOY45_RS17355 NONE
LOY45_RS17350 3801928 .. 3801959 -  -9.2  -3.10522   AGGGTACTCAAGACA      GCGCGGGTCGAGGG ACGA CACCCGCCCCTCGC       AGCACCGGCACTCAG  63 37
LOY45_RS17345 NONE
LOY45_RS17340 3800145 .. 3800170 -  -2.4  -2.94912   GGGTCAATGCAGACA         CGC-GCGCCCC TTACT GCGTCGCAGCG         GTTTCGGCCATCTTC  41 10
LOY45_RS17335 NONE
LOY45_RS17330 3798749 .. 3798759 -  -6.8  -3.45366   CCTGTAAGCAATCAA                 GTGC CGC GCAC                 TTTAATGCAGCGCCG  58 77
LOY45_RS17325 3798034 .. 3798048 -  -4.9  -2.63479   AATAGCTGCACAGTA               GCGGC GGGCG GCCAC               GACTGCAATCAGCAG  43 34
LOY45_RS17320 3796860 .. 3796890 - -17.7  -3.53811   CCCATCGTCGGCAAA       GCCAACTCCCACA GGTAT TGTGGGAGCTGGC       TTGCCAGCGATAGCT  95 52
LOY45_RS17275 NONE
LOY45_RS17270 NONE
LOY45_RS17265 NONE
LOY45_RS17260 3769132 .. 3769143 -  -2.2  -4.62069   CTTGCACGTCAAAAA                CTCC TTTA GGAA                 ATCAGCTTTTCAAGC  65 19
LOY45_RS17255 3752907 .. 3752928 - -17.3  -4.86939   CAATAAAGTGAAAAA           CGGGCCCTG CAAG CAGGGCCCG            GGAAGACTCAGCCGT 100 33
LOY45_RS17250 3751505 .. 3751515 -  -6.8   -2.7314   TGCGAAAGCAGATTA                 TGGC GGC GCCA                 AGCTGACGCTGAAGC  51 427
LOY45_RS17215 3741171 .. 3741196 - -19.1  -3.11208   GCTGACTGAAAACGA         CAGGGCCTGTG CATG CACAGGCCCTG          TTTCAAACGTCAGGC  95 35
LOY45_RS17205 3739431 .. 3739444 -  -3.1  -2.99704   GGTTGACCAAAGAAG               GTCAC GACA GTAAC                AAATACGCATCAGTG  42 103
LOY45_RS17200 3738751 .. 3738763 -  -4.7  -3.73953   ATCATCGGCAGCAAA                GGCCG GAT CGGCT                TCTCGGTATTCGACG  58 242
LOY45_RS17185 3736635 .. 3736681 - -12.3  -3.54543   ATCCATTGTGGCAAA CCAGCTCCCACAG-GGTTTGGT GTAC ACGGATCCACTGTGGGAGCCGG CCTTGCCGGCGATGG  79 51
LOY45_RS17170 3732949 .. 3733004 -  -4.2  -3.72576   TCCCCGGCCAGGAAA CCGTAGTGCGCAGCCGCCTGCTGCG TTGGTTTGC CG-AGCAG-CAACTGCA-ACCACGG ATCGTTGGCGAGTTC  56 255
LOY45_RS17160 3731946 .. 3731956 -  -2.4  -2.97029   TTCCATGAATCAAAT                 CCTG CAT CGGG                 GTAAGGGGTGGGTCA  41 38
LOY45_RS17155 3730768 .. 3730781 -  -3.7  -4.31433   CAGGCTTAGAACAAA               GCGGC CCAA GCCTC                TAGACCATCGGTCAA  63 431
LOY45_RS17145 3729476 .. 3729502 -  -5.1  -3.09878   GCCACTGAGCGAAGA        CCTGGCGCGCAG CCTG CTGC-CGCAAGA         CTACTGCGTCGAAGA  47 505
LOY45_RS17135 3728359 .. 3728378 - -11.4  -5.63517   CGCGCAAACAAAAAA            GGCGACCC TTTC GGATCGCC             TTTTTCAGTACCGCC 100 60
LOY45_RS17130 3728123 .. 3728144 - -13.7  -4.81851   ACTGAAATGCAAAAA           GGGCGACCC TTGC GGATCGCCC            TTTCTGTTACCACAC 100 58
LOY45_RS17125 3727277 .. 3727319 -  -2.7  -3.14211   ATGGCGGCGGATGAA TCACTCA-TGACGGCTCTCC TTGC GTAGAGCCGTGAGTGTACGA GGACCGGGAAGTCGC  43 44
LOY45_RS17120 NONE
LOY45_RS17115 3726218 .. 3726266 -  -4.5  -3.63569   CGAAGCCTGGAACAA GACCTACCCGCCG-CAGCCCTGG GAGCG CCAGCGCAACCAGCGAGT-GGCC TGCGTGATGGGCCAT  53 89
LOY45_RS17095 NONE
LOY45_RS17090 NONE
LOY45_RS17085 NONE
LOY45_RS17080 NONE
        rbsK NONE
        rbsD 3717867 .. 3717882 -  -3.2  -3.44553   GGAAAAACGCTAGAA              GGTCAC CCCG GCAACC               AACGCGATATTGCTG  48 4
LOY45_RS17065 3716575 .. 3716589 -  -5.6  -3.53091   AGCCTCCCCTTCAAA               CGCCAG GGC CCGGCA               TTTGAACCGACAGCG  54 251
LOY45_RS17055 3716070 .. 3716087 -  -2.6  -4.07568   TTTTTCGTTGCAAAA             CCGGAC CATTGT GCCCGA              GCCAGAGCGCTCAAG  56 75
LOY45_RS17050 3715565 .. 3715581 -  -5.8   -5.8187   GACCGAATAAAAAAA             CCCGTCC TTGT GG-CGGG              TTTTTTTGTGCCTGT 100 130
        thrS NONE
        infC 3711982 .. 3712013 -  -2.9  -3.53733   TTCAGTTGATAAACA      TAACCGCAAGGCC TGCCGT GCCCTGGTGGTTA       TTTCTTTTTCTTGGG  48 23
        rpmI 3711765 .. 3711777 -  -9.1   -2.7339   CAAAAATTAACGAAG                GCGCA GCA TGCGC                TCGACTTTTGCCACG  60 4
        rplT 3711287 .. 3711314 - -18.6  -3.88766   ACTCCAGATACGAAA        TAGGGGAAGAGC GCAG GCTCTTCCCCTA         TTAAGACGTTTAACA 100 81
        pheS NONE
        pheT NONE
        ihfA NONE
LOY45_RS17000 3707156 .. 3707172 -  -2.3  -2.71681   TAACCTTTTGAATTA              TGGAA GCATTTT TTCCA              AAATTCCGGGCCCGA  38 47
LOY45_RS16995 3706963 .. 3706981 - -10.3  -5.24129   CGCGGGCACAAAAAA             GCCGGTT CAGAT AACCGGC             TTAACTGCCTGATTT 100 55
LOY45_RS16985 3706054 .. 3706073 -  -2.1  -2.50195   ACTGAGCATTAACAG            CAGGCAT AAACGG ATACCCG             AAACGCAGAAACGTT  38 66
LOY45_RS16980 NONE
LOY45_RS16975 3705331 .. 3705347 -  -5.1  -2.57463   AATCCCTTGCATAAT              TCTTTGC AGA GCAATGA              TAGATGCCCTGCCTT  46 313
LOY45_RS16970 3703922 .. 3703943 -  -2.3  -3.93262   TTCTAACATATGAAA           TTCCTTTCC ACCT GAAAAGCAA            TGCTTATCAAAAATC  54 62
LOY45_RS16965 3701631 .. 3701641 -  -4.6  -2.58272   CAGACGACCAAGTCA                 CGCC TAT AGCG                 ATGGCCGTCGAGTAT  43 212
LOY45_RS16960 3700970 .. 3700984 -  -2.8  -3.73042   CTCTTTACGAAAATA               GATGTC GCA AACACC               GCATGGAGCAAGCCA  53 166
LOY45_RS16940 NONE
LOY45_RS16935 3697438 .. 3697459 -  -7.1  -3.76373   GCGGCAACACCGAAA           GCCCTGGCG CCCG CGACTGGGC            CGTGTCCGAGCCGAA  62 259
LOY45_RS16920 3691394 .. 3691422 - -13.2  -3.71649   TCCTGAAACGTGAAA       GCGCCCGCAAACC CGAA GGTT-GCAGGCGC        TTGAGCGGCCTAGTT  85 163
LOY45_RS16915 NONE
LOY45_RS16910 NONE
LOY45_RS16905 NONE
LOY45_RS16900 NONE
LOY45_RS16895 3688096 .. 3688111 -  -4.6  -3.14132   CGCCTGCGCCAGGAA              GTTGCC GACT GGCAGC               AGGCGAGTTTCTGGT  47 166
LOY45_RS16865 3683301 .. 3683314 -  -5.2  -3.28745   GGCGGAAGAAGTGAA               CCGC AACGTA GCGG                GGATTCGGGATGTGA  49 320
LOY45_RS16850 3677739 .. 3677779 - -19.1  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAGGTCATGTGT ACA ACACAAATCCTGTGGGAGC  GGGCTTGCCCCGCGA  91 50
LOY45_RS16840 NONE
LOY45_RS16835 3673729 .. 3673750 -  -6.5  -2.79492   TCCGCAAGGTGAAAT           CAGAAGGCG AAAT CGGCCTCTG            GCAAACTCATCAGGC  51 3
LOY45_RS16830 NONE
LOY45_RS16825 NONE
LOY45_RS16820 3670761 .. 3670789 -  -7.3  -3.02144   CTACCGCGCGGAAGA        CCTGCTGCAGGTC AGC GAACTGGAGCTGG        TACAGATTGCCGATC  54 131
LOY45_RS16805 3667943 .. 3667963 -  -3.9  -3.23216   CTCCATGAGGATTAA            GCTCGATCA AGA TGCCCAAGC            GCCCGCCGCCAGGCG  48 91
LOY45_RS16800 NONE
LOY45_RS16795 3664380 .. 3664394 - -12.8  -3.68738   TACCTCAAGACACAA               GCCGGC CTT GCCGGC               GATCGAGCCCGCAGG  81 418
LOY45_RS16790 3663096 .. 3663112 -  -5.8  -3.18199   CAAGGTCGAAGGCAA              CGGCAA GAAAA TCGCCG              AGTTGCTGGGCACCC  51 156
LOY45_RS16765 3656497 .. 3656513 -  -5.7   -4.2558   CATCGCCCAGGAAAA              GGCCCGC ACC GCAGCCC              TCGGGCGCAAGGAAA  70 243
LOY45_RS16755 NONE
LOY45_RS16750 3654944 .. 3654974 - -16.9  -5.28176   GTCACGCACAAAAAA       GCCAGGCTGCGGT TCTTG ACTGCAGCCTGGC       TTGTTGTCGAGCGCG 100 50
LOY45_RS16745 3652681 .. 3652712 - -22.4  -3.55444   GCGCCAGCGTTGAAA      CGGGGCAACGCAGC CGCT GCTGCATTGCCCCG       GCACTGGCGTCAGAA 100 35
LOY45_RS16705 3645453 .. 3645484 -    -3  -2.83271   GCACCTGTACAAGGA     CGAGCCGG-G-GAC TGCGCT GTCACGCCGGGTCG      GCTTTAGCGAAGTGC  41 187
LOY45_RS16660 NONE
LOY45_RS16655 NONE
LOY45_RS16650 NONE
LOY45_RS16645 NONE
LOY45_RS16640 3630830 .. 3630849 -  -4.8  -2.78596   TATGTGGGGATCAGA            CCGCGCTG GCTT CGTCGCGG             GCGGCGTTGTCCTGG  44 1
LOY45_RS16635 3629466 .. 3629477 -  -7.2  -3.66666   GTGAAAAGGCTCAAA                CCGC CTCG GCGG                 CGCGCTGGTACTGGC  63 9
LOY45_RS16630 NONE
LOY45_RS16625 NONE
LOY45_RS16620 3625810 .. 3625820 -  -2.4  -2.80113   GATCAGGCGATCAGA                 TCGC CAG GCGG                 AGAAATTCGAAACTG  39 10
LOY45_RS16615 3624579 .. 3624592 -  -3.7  -3.84808   CCCAAGTCAGAACAA               CCCCG AGGT CGGTG                GTGGCGTGCCGGTCA  55 3
LOY45_RS16610 3622993 .. 3623012 -  -3.4  -3.79906   CTATTGCGAGAACAA            GCGGCAGG ACCA CCTGGCGT             TCATGCATGAGGTGA  54 169
LOY45_RS16570 3616761 .. 3616774 -  -2.3   -2.5655   CGGATCGACAGGAAT               CATGG ACGT CCTTG                TAAACCTGGAAACTG  38 121
LOY45_RS16565 3615892 .. 3615919 -  -2.6   -2.6176   AAGTGGAGCGACAAT        TGCCGGCA-TCTG CGG CGGAACGCTGGCA        CTTGCGAGGGCCGGG  38 246
LOY45_RS16555 3614387 .. 3614408 -    -8  -3.93288   TCGTATCCAACCAAA           GCTGCCCT TCTCGG AGAGCAGC            AATCGGCCAATTCCG  71 104
LOY45_RS16545 3611044 .. 3611067 -  -3.1  -3.21924   CCATTCGCGACAACA          TCGCCTACGG CCGAC CCG-ATGCGA          GCGACGCCCAGGTCC  45 489
LOY45_RS16535 NONE
LOY45_RS16530 3606835 .. 3606856 -  -2.3  -3.06515   TCTGACTCTGAAAAT           TGTC-TGTCA TGC TGACATGACC           CTATCGCGGGACAAG  42 87
LOY45_RS16525 3605390 .. 3605423 -  -9.5  -2.57211   AGCCGCCGCTATAAC     CCGCCAGCTGCCCTC CGTG AAGGGCAGCTATAGG      TCGACCCCGGTCATA  62 125
LOY45_RS16500 3600836 .. 3600875 -   -23  -3.15544   CTTGACCGTTAGCAA  GTCTGCCAGGCGACAAGA AAGA TCCCGCCGCCTGGCAGAC   CGGGCTCCACCTATC 100 65
LOY45_RS16495 3599222 .. 3599232 -  -3.2  -3.39327   TTTTCAGAGTCAGAA                 TCGC GGG GCAA                 GCCCGCTCCCACCTG  48 421
LOY45_RS16470 3592798 .. 3592808 -  -6.8  -4.15044   GCGGGCTGCAAGAAA                 TGCC TGA GGCA                 GGATCGTTCGCATTC  68 198
LOY45_RS16465 3591109 .. 3591121 -  -3.3  -3.89346   TGTTGAGGGTAGAAA                TCCAC TAA GTGGG                AGCAGGGGTTGTATG  56 493
LOY45_RS16460 NONE
LOY45_RS16455 3589275 .. 3589289 -  -4.2  -3.76492   TCTAACCGGAGTAAA               TTCGTG TAT CTCGAA               TGCCGATTACTTAGG  57 184
LOY45_RS16450 3587449 .. 3587462 -  -3.8  -4.37658   AAGCCCGCGACAAAA               TGGG TCGGAC CCCA                CTGTTGCTGGCCACC  69 505
LOY45_RS16440 3586199 .. 3586211 -  -4.7   -3.4252   CGCCACCGACCACAA                CCCGC TCG GCGTG                GCGATCTACGGCGCC  51 123
LOY45_RS16420 3580644 .. 3580687 - -10.8  -3.28497   CGAGCTGAAATTCAA GGCCGCCGCCTATGCCGACC CGTT GACCGGCGTCGGCAACCGCC GCGCCTTCATGTCCC  65 476
LOY45_RS16410 3578928 .. 3578940 -    -2  -2.59079   ATGAAATCTAAGCGA                TTGA TGAAT TCAA                TTCACGGTTCGGCGA  38 27
        aguA NONE
LOY45_RS16400 3576589 .. 3576637 - -20.9  -2.59742   GGCAAGTGCCACAAT CGCCGCGACGCGCGGGCGCAACA ATG TGGCGCACCCGCGCATCTTGGCG TGCTTCAGGTCCCCG 100 30
LOY45_RS16395 3575626 .. 3575651 - -20.5  -4.72272   CGGTTGCATGAAAAA         TCCCGCAGGCC ACAC GGCCTGCGGGA          CTTTTTGTTTATGGC 100 50
LOY45_RS16375 3570557 .. 3570567 -  -2.4  -2.59431   CTTGTGCAGAACTCA                 GTGC TGG GCGC                 TGTCGACGGCAAAGT  38 12
LOY45_RS16370 3569685 .. 3569705 -  -3.1   -4.8622   CCGCTGAATGAAAAA            GCCGACCGC TGC GTGGTCGAT            CGCTGGCAAGGCCAG  74 123
LOY45_RS16355 3567492 .. 3567509 -  -9.1  -5.42198   CCCGAAAAAACAAAA             GCCCGAC CGAG GTCAGGC              TTGAAGGCGGCCAAC 100 63
LOY45_RS16350 NONE
LOY45_RS16345 3565944 .. 3565959 -  -6.1  -2.52464   TCGCGGGTCAAGCCA              GCTCC CACAGT GGAGC               TGTGTCCGCTGGACC  48 74
LOY45_RS16340 3564145 .. 3564192 -  -2.7  -3.53811   CTCATCGCTGGCAAA GCCAGCTCCCACAATAGATCTGC ATGC ACCGAACC-T-GTGGGAGCTGGA CTTGCCAGCGATCGA  48 162
LOY45_RS16320 NONE
LOY45_RS16315 3560005 .. 3560053 -  -4.5  -4.36914   TGGCCCTGCAGAAAA CCGGC-GGCATC-GC-CCTGGCCG TGCA CGGCCTGGTGCAGATGCTTGGCAG TGCCGGGCCCTATGT  69 325
LOY45_RS16305 3557778 .. 3557791 -  -3.8  -3.53444   TGATGCGCGGGCAAA               CACC GGGCAA GGTG                GTGTTCCGGCTCTCC  51 252
LOY45_RS16295 NONE
LOY45_RS16290 NONE
LOY45_RS16285 3554870 .. 3554909 -  -5.9  -2.78384   TGCTGCCCTACGACA TTGCC-CGTCGCTGAAT-CG GCA CGCATTCACCG-CGTGGCAA TGATGAAGGTACGCT  49 12
LOY45_RS16280 3554090 .. 3554100 -  -2.4  -3.21416   CATGGGCATGATCAA                 CGCC GTG GTCG                 AGGAAGTGAACGGCC  44 313
LOY45_RS16240 3544693 .. 3544712 -  -9.2  -2.57211   AGTTGCTCCCACAAT            GGGCCTGT GTAC ACCGGCCC             TGTCAACCTAGCTCA  59 28
        thpR 3532113 .. 3532146 - -20.5  -2.52543   ATCGCTGGCAAGCCA     GCTCCCACAGGTATCG CAC CGAT-CCTGTGGGAGC     GGGTCTTGCCCGCGA 100 169
LOY45_RS16155 3526413 .. 3526423 -  -2.4  -3.62046   GCATTCGGGCAACAA                 CGTC GCC GCCG                 ACCTGCTGGGTGTCG  50 264
LOY45_RS16145 3524660 .. 3524675 -  -8.2  -3.57144   TGCTGGACTCGGAAA              GCGCCG ACCC CAGCGC               CCACCTTGAAAGCAT  65 99
LOY45_RS16135 NONE
LOY45_RS16130 3522169 .. 3522180 -  -3.6  -4.72272   GTGCTGGAGCAAAAA                GCCG CGAG CAGC                 CCCGATGCCCCGCCC  75 513
LOY45_RS16120 3521031 .. 3521055 - -10.1  -2.60194   AGCGCTGCAAGCAAC          TGCTCAAGC GTGCCGG GCTTGAGCA          CTAAGGCCCATCAGG  62 36
LOY45_RS16105 3516221 .. 3516237 -  -5.7  -3.32647   GGTCAACGACAGCAA              CGACCTG CGC CTGGCCG              TGTTTGCCCATGAGC  53 258
LOY45_RS16095 3514184 .. 3514234 - -13.8  -3.01791   AGGTGTTGCTCAACA CCCGCGCCCAGCCCAGCACCGGCA TGG CGGCGGTACTGGACGTGGCGCCGA TCTACCGCACCCTGG  75 216
LOY45_RS16085 NONE
LOY45_RS16080 NONE
LOY45_RS16075 3510043 .. 3510056 -  -6.7  -3.53012   GGGTGGGTGGCGAAA               CAGTG ACGA CACTG                CGCAAGCGAGAGAAA  58 119
LOY45_RS16060 3508011 .. 3508031 -  -2.6  -5.01732   AACGCCCGGAAAAAA           TGGCCGCCGT GCA ACG-C-GCCA           CCCAACGGATGAAAA  79 68
LOY45_RS16035 3505256 .. 3505279 -  -4.5  -2.52676   TATTTGCCGAACTGA          TGGGCAAGCG CGAGC CGCT-GCCCT          ATCTGGGTGACATGA  41 346
LOY45_RS16020 NONE
LOY45_RS16015 3501346 .. 3501364 -  -3.1  -4.05033   GTCACCTGACAGAAA            TGC-CAGG TACC CCCGTGCA             GCACCAGGGGTGCAA  58 81
LOY45_RS16010 3500890 .. 3500937 -    -9  -3.30243   ACTGACGGGCCAGAA GTGCTGAACCCACAGCGGCCTC GTCA AAGACCTCTGCAGGCACTGCAC GCGGTAACGCAGCTA  65 38
LOY45_RS16005 NONE
LOY45_RS16000 3498210 .. 3498223 -  -2.3  -4.29153   CTACGAGAAAAAAGA               GGCCA GCAA TGGCA                AGTTCCACTTCAACC  63 201
LOY45_RS15980 3496108 .. 3496120 -  -4.1  -4.13654   GCCGCAAATCACAAA                CACAA CTG CTGTG                AAATTCAGGCGCAAA  60 421
LOY45_RS15965 3495005 .. 3495027 -  -6.9  -4.11394   ATGCCATCGCTAAAA           CGCGTTACC TGGCC GGCAGCGCG           GCGACCGCGTCGATT  68 7
LOY45_RS15960 NONE
        gabP 3492756 .. 3492776 -  -6.1  -2.84504   ACCGGCGAAACACCA            CAGCGGCTT ACC AATCCACTG            GCAACCCTGGATATC  47 100
        katG 3489584 .. 3489618 -  -8.6  -3.68738   TACCTCAAGACACAA    GCTGGCT-TGCCAGC GATGAG GCCGGTACAGCCAGC     ACATCAGGTGGTGTC  66 136
LOY45_RS15940 NONE
LOY45_RS15935 NONE
LOY45_RS15920 3483675 .. 3483705 -  -6.1  -4.77438   ATTTAGCACCAAAAA       TGCCCACAGAG GAACGGGGG CCCAGTGGGCA       GCGGTGCATTGAGCC  78 111
LOY45_RS15915 3481767 .. 3481782 - -11.8  -5.27335   CTGGGGAAATAAAAA              GGGCGG TCGC CCGCCC               CTTTTTGTTACTTGC 100 33
LOY45_RS15910 3481278 .. 3481315 - -12.7  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTTCGGC GGGC GCAAGACCTGTAGGAGC    GGGCTTGACCCGCGA  72 68
LOY45_RS15905 3478941 .. 3478970 -  -8.4  -4.63218   CGGCGTTCAAGAAAA       CCCGCGACGACG TCCGCG CCCCGGCGCGGG        TCGAACAGGTGATCA  88 225
LOY45_RS15895 3477621 .. 3477631 -  -8.2  -3.29704   TCCTCAGCAAAGACA                 GCCG CTC CGGC                 CAGTTGTTGCTACAG  59 474
LOY45_RS15880 3475470 .. 3475492 - -15.6  -2.60723   TGAGTTTGAAGTAAG           CGAAGGGCCA TTG CGGCCCTTCG           TTCTATATACAAGGA  82 47
LOY45_RS15870 NONE
LOY45_RS15865 NONE
LOY45_RS15860 3469995 .. 3470011 -  -4.3  -3.01712   CTTCTTCCGGCAACA              GCAACTG CCC CTGCTGC              TGGTTGAAAGCGACG  44 156
LOY45_RS15850 3468720 .. 3468732 -  -9.1  -2.56095   TCGACAGCGAACTGA                CCGAC ACC GTCGG                CGGCAGCTTCGACGG  55 518
LOY45_RS15835 3463986 .. 3463998 -  -4.8  -4.25104   CGCGCCTCATCAAAA                CTGG CAGGC CCAG                GCCGAGGTTTACTCT  68 387
LOY45_RS15825 3462640 .. 3462653 -  -3.1  -3.76224   CGCCCACCTACGAAA               GCTGGA CCA TCC-GC               CGCGAGTCCTGGCTG  54 103
LOY45_RS15750 3442396 .. 3442443 -    -9  -3.14931   CTGATCGGCCAGCAA CTGGGCAATGCGCTGCGCGCCC GCCA GTACCGGCAGTGGATTGCCCAG CGCGTGCGTTGAGCC  63 127
LOY45_RS15735 3439280 .. 3439292 -  -4.8  -3.90744   GCCCTCGGCAAACAA                CTGG GCTTG CCAG                TGGTGCACCTGGACA  60 505
LOY45_RS15725 NONE
LOY45_RS15720 3436529 .. 3436539 -  -4.6  -3.44848   CCTGCGCATCAAAGA                 CGGG TTG CCCA                 AGCTGAAGGATGTCC  53 135
LOY45_RS15705 3434175 .. 3434204 - -13.1  -2.63715   AGCGATTGCAGAGCA       TTCCC-ATCATGCA AAG TGCATGATCGGGAA       GCCGCTAGCGGGTGT  73 170
LOY45_RS15700 3432826 .. 3432846 - -12.5  -5.52384   TGGGCAGTAAAAAAA            GCCCGGCCA AAA TGGCTGGGC            TGAGTATTGCGAGGG 100 312
LOY45_RS15695 NONE
LOY45_RS15680 NONE
LOY45_RS15675 3427547 .. 3427599 - -43.8  -2.64933   TACTGACTGACAGCA TCGCGGGGCAAGCCCGCTCCCACA GGTCG TGTGGGAGCGGGCTTGCCCCGCGA TTACGCACGAACCAC 100 26
LOY45_RS15665 3424926 .. 3424937 -  -7.2  -5.31456   CCAACCGACAAAAAA                CGCC GCCC GGCG                 CATAGCTGCTATGGC  91 34
LOY45_RS15660 3423383 .. 3423419 - -13.7  -3.17075   TCGCTGGCAAGCCAA    CTCCCACAGGGTCAG CATGCAC CGGCCCCTGTGGGAG    CTGGCTTGCCAGCGA  78 55
LOY45_RS15655 NONE
LOY45_RS15650 3420979 .. 3421025 -  -9.6  -4.85822   AGGAGAAATATAAAA GCATCGCGACGCAAG--CGCTCC TGCA GGAGCGGGCTTGCCCCGCGAT-C AAACTTCAACAGCTG 100 31
LOY45_RS15645 3418600 .. 3418623 - -10.2  -3.44848   GCCCGCGAGCAAATA          CGCTGGACCG GCCC CGGCGCAGCG           CCGGCAACTTTTCGC  69 233
LOY45_RS15630 3416988 .. 3417009 -  -8.7  -3.09492   CCCGTAAGCCGAAGA           CGGCAGC GCAATGAG GCTGCCG            GCCTCATCGCTGGCA  63 126
LOY45_RS15620 3412534 .. 3412567 -  -3.6  -3.84406   TGCCTATGACAATAA     TCCCGAGGCCCTGG AACATA CCCGCGCCTTGGGC      AACCAGCCGCAACTG  56 417
LOY45_RS15595 3408878 .. 3408901 - -14.6  -5.38958   ACCCACAAAGAAAAA          CCCCGCAGAC GTTA ATCTGCGGGG           CTTTCAATAATGGAG 100 35
LOY45_RS15580 3407280 .. 3407292 -  -6.2  -3.88291   GACCAGGTGCAGAAA                GGCG ACGAG CGCC                AGGCTGCACGAATCT  62 516
LOY45_RS15555 3402924 .. 3402934 -  -8.2  -2.77899   GGGCTCCATGAACCA                 CGCC GCC GGCG                 CCGGCAGAGGCTGGC  57 106
LOY45_RS15540 NONE
LOY45_RS15535 3400783 .. 3400804 -  -7.9  -3.16564   GCCGCATTCTATTAA           TCCAGCGCC TGAA GGAGCCGGA            AGCAGGTTGCTGGGG  55 377
LOY45_RS15525 NONE
LOY45_RS15520 3398440 .. 3398459 -  -5.8  -3.01924   CATTCGCCTGGAAGA            CGATGTTT TTAT AAACATCA             TGATTGAAACTTCCA  51 235
LOY45_RS15515 3396924 .. 3396935 -  -2.2  -4.42386   CTTTCAGCTAGAAAA                TCGC CCCC GCAA                 TGCCCTTTGCAATAG  63 45
LOY45_RS15505 3395466 .. 3395491 - -14.1  -4.18494   CACGTGCACTGAAAA         CAGGTGCGCGAC CGG GTCGC-CACCTG         AGCGGCGGCGAGATT 100 134
LOY45_RS15500 NONE
LOY45_RS15495 NONE
LOY45_RS15490 3394314 .. 3394328 -    -2  -3.29829   TAGACGCTGCTATAA               CCGGTG AGT CACCTA               AGCCCTGCATCGGCT  44 45
LOY45_RS15485 3393994 .. 3394019 -  -3.9  -5.12617   CAAGCATGCAAAAAA         GCCCCACAGCGC CAT GAGCC-TGAGGC         CTTCACTTGACTGGG  79 58
LOY45_RS15480 3392203 .. 3392222 -  -4.2  -3.39036   AGACATTAGGCATAA            GCACCTCG GTTG CAAGGCAC             AGGAGGTCTGGGCCG  52 93
LOY45_RS15475 3391643 .. 3391656 -  -3.1  -2.61912   GCAGGCAGGCACAAC               TTCAC ATCA GCGAA                AGATACCATCCAATA  40 13
LOY45_RS15470 3391006 .. 3391033 -   -12   -3.1247   ACGGCTGACAGTGAA        GGCGGTC-TGCTC GAC GTGCATGACCGCC        GTCCAATCGTGCTGG  69 177
LOY45_RS15455 3389652 .. 3389664 -  -3.3  -3.28712   GGGGCGCCTGTATAA                GCGCA CTC TGCCC                CGCCGTCAACTACGG  46 43
LOY45_RS15450 3388978 .. 3389003 -  -5.3  -3.28924   TACCCTGTTCGACAA         CCAGCGCGACG TCAT CATCCTGCTGG          CGCGGATACTGCTGA  49 430
LOY45_RS15430 NONE
LOY45_RS15425 NONE
LOY45_RS15420 3385030 .. 3385056 -  -2.9  -4.62069   CCGGCACCGGAAAAA         GGAGGCGAC GAGCACTAA GTAGCCCCC         AGCTCACTCAAGCCG  67 95
LOY45_RS15375 3378771 .. 3378787 -  -3.6  -4.00066   GCTACAACGCAGAAA              GATGGC GAGAT GCCAGC              TGAATCGGTTAGTTG  58 50
LOY45_RS15370 NONE
LOY45_RS15365 3377078 .. 3377103 - -12.5  -2.74122   CCGGATCATAAATAT         TGCGCCGGTGG CTGA CCACCGGCACG          TAAATCCGGGGGCAT  74 49
        galU 3376055 .. 3376070 - -10.4  -5.21236   AAGCTACAAGAAAAA              GCCACC CGAA GGTGGC               TTTATCAAACCGCTA 100 51
        gorA 3374585 .. 3374622 -  -8.4  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAAAGCCAG TTGTAC CTGTACCTGTGGGAGC    CGGCCTTGCCGGCGA  55 54
        ahpC 3373763 .. 3373786 -   -21  -4.15703   CGGTAGAAATAACAA          CGCCCGGGCG AAAG CGCCCGGGCG           TTTTGCGGGGCGGTG 100 87
        ahpF 3372120 .. 3372134 - -11.4  -3.68738   TACCTCAAGACACAA               GCTGGC CTT GCCAGC               GATGGGCCGCAAAGC  77 55
LOY45_RS15340 3370633 .. 3370661 -  -2.4  -4.56597   GTCCGCCCGGAAAAA       GCC-CTGGCCCTGA GTG TC-GAGCAAGCGGC       GCGCGAGGCATTGCC  67 347
LOY45_RS15315 3366142 .. 3366177 -  -2.4  -3.53444   GCCGCGAACAACCAA    CGCTGGTGCGGGTGCAT GTG ATCGACCCGCTGC-GCG    ACCTGGTCGGTGCCG  47 406
LOY45_RS15305 3364974 .. 3365028 - -31.6  -3.18264   TTCTTGAGCCAGTAA CCCATCGCAGGGCAAGTCCGCTCCCA TGG TTGGAGCGGGCTTGCCCCGCGATGAG TGATTTTCACACCCC 100 32
LOY45_RS15295 3358890 .. 3358925 -  -8.2  -4.72272   CTGCTGGAGCAAAAA    GTCGGTCGCGT-GCTGT TCA ACGGCTACCCGACCGGC    GTCGAAGTCTGTGAT  91 267
LOY45_RS15165 3334255 .. 3334269 -   -10  -3.14132   CTCTGGGCCCACGAA               CTGCAC CAT GTGCAG               CAGTACCAGCAATGG  63 165
LOY45_RS15150 NONE
LOY45_RS15145 3331742 .. 3331753 -  -5.8  -2.64616   GCTGCACTGACACTA                TCGG AGTC CCGA                 CCCGCCTCGACCATA  48 81
LOY45_RS15140 NONE
LOY45_RS15135 NONE
LOY45_RS15130 NONE
LOY45_RS15125 NONE
LOY45_RS15120 3325473 .. 3325502 -  -2.7  -2.98447   TCATCGACCAGAAAG       CCCGCACCGACCTG CCA CAGGACTGC-CAGG       TGATCGACATCTCGC  41 523
LOY45_RS15105 NONE
LOY45_RS15100 NONE
LOY45_RS15095 3321722 .. 3321754 -   -17  -2.62983   GCGATGTCGAGACGA     CGACGGCCGGGCTAC GCTA GC-GCCCGGCCGCCG      ATCGGTTAACGGCGT  86 40
LOY45_RS15090 3320615 .. 3320627 - -10.5  -3.01712   GGGCTCGGTCGAATA                GGCCG CTA CGGCC                GCGAGAAGGTCAGGA  62 107
LOY45_RS15070 3318986 .. 3319021 -  -9.6  -3.03124   GCTCAGCCCTGAATA    CCTGCGCCCGGCCAGC CTTG GCTAACCGGTGGCAGA     CTGCGTGGTTCAGGC  65 35
LOY45_RS15050 3316398 .. 3316429 -  -7.2  -2.52516   TGCTCGATTACCAAG      GCC-TGCGCGCGCTG TTT CAGCAAGCCCACGGC      AAGCGTGCAGGTCTG  47 224
LOY45_RS15035 3313849 .. 3313865 -  -3.6  -4.56597   CGGCGCCTGGAAAAA              TCGGTC TGGGT GACCGG              CTGCAAGAGCTGGTA  69 158
LOY45_RS15025 3311274 .. 3311288 -  -5.6  -3.63694   ACGGAGCTTGAACAA               CTGCTG GGA CAGCCG               GTGCACGCCTATGTC  57 504
LOY45_RS14980 NONE
        dsdC 3298742 .. 3298755 -  -8.1  -3.17075   CCGGCTGGAACTGAA               GCTGG AATT CCAGC                AGACCAACCACGAAG  55 341
LOY45_RS14960 3295970 .. 3295982 -  -4.7  -3.31144   GTTCGAGGTCGACAA                GCGCC TGG GGCTC                AAGCCCGTGGTGGAT  51 511
LOY45_RS14950 3295365 .. 3295381 -  -9.4  -3.75897   AACCCCCAAGCCAAA              TGCGGC GCGGG GCCGCA              GCCTGCTGGCTCATG  71 106
LOY45_RS14940 3294059 .. 3294094 - -12.6  -3.05463   ATGCGCGGCATCGAA    CTGCTCAA-GGCCGACG GCA CACCGGCCACCGAGCAG    CTGACGCAACTGTTG  69 184
LOY45_RS14925 3290312 .. 3290336 - -11.5  -2.52543   ATCGCTGGCAAGCCA          GCTCCCACA GAGTCCT TGTGGGAGC          TGGCTTGCCAGCGAT  67 57
LOY45_RS14920 3288776 .. 3288796 - -11.2  -4.93365   CCGCACAACGAAAAA            GCCCATGA ACCGG TCATGGGC            TTTTGCCTTGCCAGC 100 48
LOY45_RS14915 3288147 .. 3288158 -  -2.2  -3.39482   CAAGAGCAGCGATAA                CGGT GGCA ACCA                 GGTGGGCGGCAACGG  45 80
LOY45_RS14890 3283291 .. 3283303 -  -3.3  -3.20348   GCCATGAAGATGGAA                CACAG CAT CCGCG                CGCCCCATGCCGGGA  45 232
LOY45_RS14865 3275821 .. 3275872 - -13.1  -2.52543   ATCGCTGGCAAGCCA GCTCCCACAAGGTTC-TCAGAGCAC TCAA GGGCTCTGCTGCACCT-GTGGGAGC TGGCTTGCCAGCGAT  72 56
LOY45_RS14860 NONE
        treS NONE
        glgB 3268019 .. 3268032 -  -2.3  -3.32022   TGGGTTAGAGACCAA               GGGCA TGGC TGCGC                TTCCATGAAAAACCG  44 96
LOY45_RS14845 3262670 .. 3262688 - -10.2  -3.64822   ATGGCCGCAGCGAAA             CCGGCCAG CGC CTGGACGG             CAACGGCCATGCCCT  71 496
LOY45_RS14800 3249637 .. 3249663 -  -7.2  -4.08557   CGCCTCAAAGAAGAA         CGCGACCAGTTG CAA CAACAAGTCGCC         CGGCTCAACCTGCTG  68 94
         gnd NONE
         zwf 3246374 .. 3246389 -  -2.4  -3.19463   GGCATCACCGACGAA              CACCGC CTGG GCCGCG               CGTTCCAGGACGCCA  44 509
LOY45_RS14775 NONE
        nudC NONE
LOY45_RS14765 NONE
LOY45_RS14745 3234234 .. 3234251 - -11.3  -5.28176   TGCAGCGATAAAAAA             CCGAAGC CTGG GCTTCGG              TTTTTTTTTTGCCGT 100 52
        sohB 3231922 .. 3231935 -  -2.3  -3.44848   GCCGGTTACCAAAGA               CGCCC ACTG AGACG                GCTCCAGAGCTTGAC  46 2
LOY45_RS14725 3226804 .. 3226861 - -30.1  -2.52464   TCGTCGCTGAATGCA TCGCGGGGCAAGCCCGCTCCTACC-GAT GTC ATCTGGTGGGAGCGGGTTTACCCCGCGA TCAACTTCAATTGCC 100 60
LOY45_RS14710 3223110 .. 3223148 - -12.4  -3.01791   ACCGCCCGCTGAACA   GCAGTCCGCCCGCAGA TGTCCAT TCTGCGGGCGGTTTAC   TGTTACCCATCGCGT  73 245
LOY45_RS14695 3216524 .. 3216543 - -12.8  -3.06831   TCAAGTCCCACTCAA            GCCCCGGC CGGA ACCGGGGC             CGCATGAGTGCTCGG  75 88
LOY45_RS14690 NONE
        nfuA 3214750 .. 3214788 - -12.5  -2.52543   ATCGCTGGCAAGCCA  GCTCCCAC-AGGTACAGC ATGC ACCGAACCTTGTGGGAGC   TGGCTTGCCAGCGAT  72 54
LOY45_RS14640 NONE
LOY45_RS14635 NONE
LOY45_RS14630 NONE
LOY45_RS14625 NONE
LOY45_RS14620 NONE
LOY45_RS14615 NONE
LOY45_RS14610 3192106 .. 3192138 - -10.5  -3.04144   GGCCTACCTGCAACA      GCACGGCCAGCCG CAGACAC CGGCCGACCTTGC      CAACCATAACTGCCT  62 377
LOY45_RS14590 3188689 .. 3188707 - -10.2  -3.06483   GAGGCAAAGCACATA             GCGGGCCA AGA TGGCGCGC             TGGAGGGGTTTGTTT  68 121
LOY45_RS14585 NONE
LOY45_RS14580 NONE
LOY45_RS14575 3187074 .. 3187087 -  -3.7  -2.71712   GGCCCTGCGGGAAAT               CCGGC TCAT GCCTG                CGCCTCCAGCTTGCC  42 17
        ureC NONE
        ureE NONE
LOY45_RS14560 NONE
LOY45_RS14555 NONE
        ureG 3182570 .. 3182584 -    -7  -2.93382   TGGGATATCGAGACA               CCTGCG GCG CGCGGG               CTGATCAACGGCCTT  50 455
LOY45_RS14540 3181119 .. 3181167 -  -9.4  -3.65314   GGCAAGGCCGAAGAA GCGCGGCGCCAGGGTGC-CGACC ATGT GATCGTGTCCACTGACGCAGCGC AGATGCAGGCCGCCG  68 393
LOY45_RS14530 3178941 .. 3178952 -  -4.4  -3.60865   CACCTTAAACCACAA                TCTG CAAC CAGA                 CGAGAGCCAGGCCGC  54 481
LOY45_RS14520 3176907 .. 3176930 - -14.6  -3.07816   TGTTCATGCAGTGAA          GGCTCTGGCC GGAA GACCAGAGCC           TTTATAGACCACAGG  81 86
LOY45_RS14515 NONE
LOY45_RS14510 3174565 .. 3174579 -  -5.6  -2.60194   AGCGTGGGAATCAAT               CGTTGC ATT GCAGCG               CTCTCTTGTTGTTAT  46 101
LOY45_RS14505 NONE
LOY45_RS14500 3171975 .. 3171991 - -13.7  -2.97667   GCAGCCAGCAAATTA              CGAGCGC TGC GCGCTCG              ATCGCGGGGCAAGCC  77 88
        chrA 3170528 .. 3170544 -  -7.9  -3.34344   GTAGGCGTCAACGAA              GACCCGG TCA CCGGTTC              CGCCCACACTTCGCT  58 190
LOY45_RS14480 NONE
LOY45_RS14475 3167552 .. 3167563 -  -2.2  -3.02511   TGTATTGGGCTAATA                CAAG GACG CTCG                 GGTAACAAGAACTGG  41 60
LOY45_RS14470 NONE
LOY45_RS14465 NONE
LOY45_RS14460 3163239 .. 3163268 - -10.7  -4.18197   AGCGGTTACTCAAAA       GGCCAAG-GCGCGG ACG CTACGCACTTGGCC       GCGGCAGATCAAGCC  81 479
LOY45_RS14450 3161773 .. 3161787 -  -4.2   -2.6348   GGGAAATTTCACAAT               CCCC TTTTCGC GGGG               CAAGTCGGATCGCCG  43 52
LOY45_RS14445 NONE
LOY45_RS14440 3160183 .. 3160198 -  -4.6  -2.82623   TGTTGTCCATAACGA              GGACAC GCCA GTGACC               GAATCCCCTCAGCGA  44 59
LOY45_RS14435 3157535 .. 3157578 -  -2.9  -3.15544   CGGGAGCTGGATGAA GGCATGCTGGTGACGCCCT TTGCAC AGGGCATCGCCAGTGAGCT GGCGTATTACCTGGT  43 150
LOY45_RS14425 3155613 .. 3155638 -  -8.3  -3.28712   GCGGGCGCTGGAGAA         GCAACCGG-AGA TTG CCTACCGGCTGC         TCGATGCCCATGACC  59 86
LOY45_RS14415 3154380 .. 3154391 -  -7.2  -3.39844   GGCACACTCTAAAGA                CCGC CGCC GCGG                 AAAAGATTCCAAGGA  61 69
LOY45_RS14410 3153395 .. 3153432 -  -5.5  -4.57569   CCAGGGCCTGAAAAA   CCTCGGCGAAGGC ATCGAACCCCTG GCCCGCGCCGAAG    ACGGCCTGGTCGAAG  76 277
        hpaR 3151929 .. 3151941 -  -4.7  -3.09289   GACCACGGGAACAGA                GGCGC CTG GCTCC                GGTCAACGACGGCAC  47 97
LOY45_RS14395 3151521 .. 3151547 - -14.5  -3.05935   ATACTTCTGAGCCAA        GGCGTGCCCCTG CAAG CAGGGGCA-GCC         CCGTCACCGCTTACT  81 36
LOY45_RS14355 3143602 .. 3143660 - -10.4  -2.55351   TGTGTGCACAGTAAT CGCTGGCAAGCCAGCTCCCACAATGATC AGCAA AAACCCTGTGGGAGCTGGCGTGCCA--G CGATAGCGTGCTCAA  64 46
LOY45_RS14350 3142071 .. 3142112 -  -7.9   -3.0976   CGCAAGACTGCAACA GGGCTGAGAGTGGCGAAAC AGAC GCCTCACCCCTCTTAGCCA  TACAAAGAGGGGCGC  57 202
LOY45_RS14345 3140716 .. 3140758 -  -6.3  -2.57211   ACTTTTGTGGACAAT CTTTAGTTGTTCGGGAGCCGA TTG CCGGCTCCCGAAC--CCAGCG GTTTAACTCAGCAGC  48 28
         tpx 3139933 .. 3139955 - -14.8   -5.4182   AACTATAAATAAAAA           CGGCCTGGAC GAG GGCCAGGCCG           CAACAACTCTTAGCA 100 171
LOY45_RS14335 NONE
LOY45_RS14330 NONE
LOY45_RS14325 NONE
LOY45_RS14320 3130618 .. 3130666 -  -6.7   -4.3623   AGATCAAAAATTAAA GCCATATGGCAGAATTCAATGCA ATC TGCATCGAAAGCCGCCATACCGA ACATATGACTTTAAC  74 62
LOY45_RS14315 3127975 .. 3127990 -  -2.4  -5.13137   CAAACAAACGAAAAA              CCGTCA TGAT CGGCGG               CGGACACTGATGCCG  75 383
LOY45_RS14295 3124989 .. 3125018 - -10.1   -2.6381   AGAATCCCGATAGTA       CCTC-ATCGATGCC CCC GGAATCGATTGAGG       GCAATTTCATGGCAC  62 32
LOY45_RS14290 3123610 .. 3123650 -  -8.8  -3.03124   GTGGATTGGCGAATA  CGCCGGCGCCGGTTACCA GGGCG TGGCCACCGCTGCCCGCG  CGCACCTGGATGACC  56 304
LOY45_RS14265 3119831 .. 3119845 -  -4.2  -3.85698   CTTGCCGTTCACAAA               GGCG CATCCAC CGCC               AGGCCCTGCAGCCGC  57 4
LOY45_RS14260 NONE
LOY45_RS14255 NONE
LOY45_RS14250 NONE
LOY45_RS14245 3110428 .. 3110444 -  -2.9  -2.62184   GGCGCGCGGACATGA              CTCAGCG CCC CGCCAAA              GGTTGCGACAGCAAC  40 10
LOY45_RS14240 NONE
LOY45_RS14235 3108160 .. 3108173 -  -3.7  -3.75193   AAGCATAGACGCAAA               CGGGC GCTA GCCCC                TTCCCCAATCCCGGG  55 98
LOY45_RS14230 NONE
LOY45_RS14225 NONE
LOY45_RS14220 NONE
LOY45_RS14215 NONE
        pilO NONE
LOY45_RS14205 NONE
LOY45_RS14200 NONE
LOY45_RS14195 NONE
LOY45_RS14190 NONE
LOY45_RS14185 NONE
        csgE NONE
LOY45_RS14175 NONE
LOY45_RS14170 3098269 .. 3098283 -  -3.4  -3.75015   ACAACGGCTATGAAA               CCCCGG TAG CCATGG               AGAAAAAGCTCAAGG  54 248
        cobW NONE
        cobN NONE
LOY45_RS14125 NONE
LOY45_RS14120 3086857 .. 3086875 -  -8.1  -3.86194   AACTCGCTGGACAAA             CTGCGAC ACTTG GCCGCAG             TTGTTTTTATTGATA  69 46
LOY45_RS14110 3084744 .. 3084769 -  -8.3  -2.70932   GCGGCGCCGCAACGA         GCTG-GATACCG GGG CGGTATCACTGC         GGCCACCGTGGGGGA  56 120
LOY45_RS14105 3083224 .. 3083239 - -11.8  -4.86621   ACTTCTAAGCAAAAA              GCCCGC TTCG GCGGGC               TTGTGGTATCTACCA 100 44
LOY45_RS14060 3069808 .. 3069827 - -12.1  -5.50499   CCACAGGCAAAAAAA            GGCCGCC TCAATG GGCGGCC             TTCACCAGCACGCGC 100 50
LOY45_RS14045 NONE
LOY45_RS14040 3065240 .. 3065254 -  -5.6  -3.95324   CACTGCGAAGAAGAA               CTCGAC CGT GGCGAG               CTGGTGCGGCTGCTG  64 517
LOY45_RS14025 3063705 .. 3063731 - -22.4  -5.15634   GACTCCATGAAAAAA         CCGACTGCAGGC CAT GCCTGCAGTCGG         TTTGGGTGGCGCTAG 100 46
LOY45_RS14020 3062386 .. 3062426 -  -2.4  -3.74693   GTGGAGGCGATCAAA CAGGTACCCAGCTCCA-GC CGCG GCGCGGGCCTGGGCGCCTA  CGCGGTGTTCTTCGA  53 179
LOY45_RS14000 3057254 .. 3057265 -  -7.2  -3.88291   CAGGACTTCCACAAA                GGCG TCAG CGCC                 ATGGAAGGAAGACAG  69 462
LOY45_RS13975 3055158 .. 3055179 - -13.7  -2.84574   CACTTCAACGAATCA           CGCCACCCC GGCG AGGGTGGCG            CCTGCACGAAAGGAC  76 329
LOY45_RS13965 3053646 .. 3053659 -  -3.1  -4.09864   AGCGACTTCGTAAAA               GCCGAG GAC CT-GGC               CGACGATGCCGCCAG  60 411
LOY45_RS13955 3052242 .. 3052265 -  -2.4  -3.92869   GCATGCATGGAGAAA          GCCACGAGCTG CTA CAACT-GCGAC          TACGTTCGCCGCCAC  54 346
LOY45_RS13945 3051722 .. 3051732 -  -6.8  -2.58699   CAAGAAGCCAATCGA                 GGTG TGC CACC                 CATGAGACGCATCCA  50 217
LOY45_RS13935 NONE
LOY45_RS13930 3048622 .. 3048640 -  -3.1  -4.42386   TGCTTATGCACAAAA            CCA-CCCG CCCC CGGGATAG             CCACACCCTGAGCCT  64 469
LOY45_RS13915 3046636 .. 3046648 -  -6.2  -3.53012   CGCCGGCTGGCTAAA                GGCG ACCGG CGCC                TGCCTGGGTATCGCC  55 510
LOY45_RS13900 3044831 .. 3044846 -    -6  -2.55074   CGCAACTGGAAGGCA              CTGGCG CTAA CGCCGG               TGTGCGCTTCAGTTT  48 41
LOY45_RS13890 3041822 .. 3041842 -  -8.9  -3.37499   GAACAGCTCAAGCAA            CGCATCGCC AAG GGCGAGGCA            TTCGATGTGCTGGCC  60 214
LOY45_RS13825 3027539 .. 3027559 -  -6.1  -3.97088   CTGCACAACAGCAAA            TTGCAGGCC GCC GACCTGGAA            ATGACCTGGTTGAGC  64 205
        pedF 3024069 .. 3024102 - -13.1  -2.55668   CAGGTGCAGATCAAC     GCCGCGCGGCTGTTGA TCC TCCAC-GCCGCGCGCC     TGCGCAGCGCCGGCA  67 346
LOY45_RS13795 3020482 .. 3020499 -  -4.1  -2.80113   GATGAGGCCAGTACA             GCCAGCAC ATC ATGC-GGC             GCCTGGATTACGACC  43 106
LOY45_RS13790 NONE
LOY45_RS13785 3015829 .. 3015851 -  -6.9  -2.96452   ACGGCTACAACGACA           GCGCGCACT TCGTC AGCGGGCGC           TTGCCACGCTGAGTT  53 15
LOY45_RS13770 3012090 .. 3012108 -    -6  -2.53876   CGTCAGTCGAATGCA             CAAAAACC GGC GGCCTTTG             TTTGGCACTTGGCCA  48 49
LOY45_RS13765 3010575 .. 3010598 -  -7.5  -3.03007   AACAGGCGCTCAACA          GCAACA-GCC TGATC GGCCTGTTGC          GGCGCATCCTTGAGC  54 285
LOY45_RS13755 3008633 .. 3008643 -  -8.2  -3.06183   TTCAGTTTGATCTAA                 GCGC AAA GCGC                 GCCCCATCAAGCTAA  60 106
LOY45_RS13750 3007676 .. 3007726 -  -9.7  -3.14132   GTGGTGGTCGATCAA CAGGATGAGCCCCAAGGATT-CAT TTGT ACGAAAGCCATGGGGCACAACCTG CACATCGTTGAATTG  60 314
LOY45_RS13740 NONE
LOY45_RS13735 NONE
LOY45_RS13730 NONE
        argE NONE
LOY45_RS13720 NONE
LOY45_RS13715 NONE
LOY45_RS13710 2999198 .. 2999223 - -19.7  -3.01712   GCGGTTCCTCTAATA         GGCCGGCACGC CCGC GCGCGCCGGCC          GCTTTTGGGCTTACA 100 36
LOY45_RS13705 2998117 .. 2998130 -  -6.7  -3.05384   TTGCCGGCGATGCAA               GGCAA AGCC TTGCC                AATCAGCCTCAGCGC  54 34
LOY45_RS13695 2996563 .. 2996581 -  -8.8  -3.12327   GTTGCACAGCGAAGA             CCTGGCCA ACC CGGCCAAG             CTGGAAGTGCGCGCC  57 154
LOY45_RS13685 2993400 .. 2993410 -  -2.4  -2.71269   AATCTCGAAATCAAT                 GGGC AAG GGCC                 GGGGCTCCTTCTGCA  38 10
LOY45_RS13680 NONE
LOY45_RS13675 NONE
LOY45_RS13670 2991707 .. 2991718 -  -5.8  -2.87132   TCCGGCGTGCACAGA                TCCC CTGT GGGA                 GCCGGCCTTGCCGGC  49 48
LOY45_RS13665 NONE
LOY45_RS13660 2990215 .. 2990227 -  -6.9  -2.75382   GACGCTATCCAACTA                GCAGG CCG CCCGC                CATTGGCGGATCTGG  51 10
LOY45_RS13655 2989185 .. 2989212 -  -4.6  -3.35996   GATCGGCATTCACAA        CGGCACCTTGGC GATT GCCCTGGCGCTG         AGCCCTACCCTGCTG  51 197
LOY45_RS13645 NONE
LOY45_RS13640 NONE
LOY45_RS13635 2984182 .. 2984213 -    -6  -3.86897   TTCATCGCCGACAAA      CACTTCAAG-AGC CCCAGCC GCTACCTGAAGTG      GGCGTTTCTGGCGTT  62 425
LOY45_RS13615 NONE
LOY45_RS13610 NONE
LOY45_RS13605 2977460 .. 2977490 -  -6.6  -4.07885   TATTGTTTTTGAAAA       GCCCGACGGTCAGC GCT GCGGATCGGCGGCC       CGGCACGTAAACACG  68 57
LOY45_RS13600 NONE
LOY45_RS13595 NONE
LOY45_RS13590 NONE
LOY45_RS13585 2973776 .. 2973794 -  -8.1  -4.11216   CCGTTACCTGGAAAA             CCCCAGC TACTC GCTGGGA             CGGATTGCCGACATG  71 347
LOY45_RS13575 NONE
LOY45_RS13570 NONE
LOY45_RS13565 2968642 .. 2968655 -  -3.7  -3.06501   GACAGGCTCAGCGAA               TGCCG GCCC CGGCC                AGGGACTCGGGCGAC  46 4
LOY45_RS13560 NONE
LOY45_RS13555 NONE
LOY45_RS13550 NONE
LOY45_RS13545 2961474 .. 2961497 -  -5.2  -3.71848   CTGGCTGACCAACAA          CTGCACTGCA TCAA TGCCGTCCAG           CCGCTAACCTCGGAC  58 133
LOY45_RS13535 NONE
LOY45_RS13530 NONE
LOY45_RS13525 2955287 .. 2955300 -  -5.3  -4.26076   GGACCTGGAGCAAAA               TGATC GGCT GATCA                GTGTGGCATTAAACT  67 78
LOY45_RS13520 NONE
LOY45_RS13515 NONE
LOY45_RS13510 2953780 .. 2953807 - -16.2  -2.75294   GCAAACGGTGGAAAG        TGGCGGCGGCCC AGCG GGGCCGCCACCG         AACTGCGCTGATCAG  82 37
LOY45_RS13505 NONE
LOY45_RS13500 2943070 .. 2943082 -  -6.9  -3.18912   TTATCCAGCCATCAA                CGCAC CCA GCGCG                ACTCGCTGCTCTGCA  54 9
LOY45_RS13490 2940580 .. 2940615 -    -6  -4.02817   TTGCTACAACAAGAA    CAGTGGC-CGGCCGCAG AAT CCGCTGCAGCGCTACTG    ATCCTGAACTAAACC  64 34
LOY45_RS13475 2938511 .. 2938532 -  -2.2  -3.07029   GAAACAGTGCCAATA           CGCCGAGA AACAAA TCTCGCCA            ATACGGTCTAAGCCA  42 389
LOY45_RS13470 NONE
LOY45_RS13465 NONE
LOY45_RS13460 NONE
        cpaB NONE
LOY45_RS13450 2933863 .. 2933876 -  -2.3  -2.57211   ACGGTGTCCCATAAG               GCCTC CTAA GAGTC                GGTACTCGGTGTCTG  38 17
LOY45_RS13445 NONE
LOY45_RS13440 NONE
LOY45_RS13435 NONE
LOY45_RS13430 NONE
LOY45_RS13425 NONE
LOY45_RS13420 2928179 .. 2928226 - -41.6  -3.37017   AACCCTTAACAGCAA TGGGGCCTCTGCCTCCAGCGGG TTTA CCCGCTGGAGGCAGAGGCCCCA TGTCGTTGAGGCTTG 100 52
LOY45_RS13395 2923118 .. 2923167 - -17.1    -3.524   TAGTCAGCTATAGAA GCACGCGGGTGGTGGCAGGACAG ATTT CAATCCTGCCACCACCCGACTCC AGCCTCTACGACTTC  95 39
LOY45_RS13390 2920568 .. 2920581 -  -9.5  -3.68738   GCGTGAAGAAAGCAA               GGGCC TGGC GGCCC                AACTGAAGGATGCCA  71 475
LOY45_RS13380 2918659 .. 2918672 -  -2.3  -3.22298   GCTAGCCAGGACGAA               TTGCG TCCT CGCCA                GCAGGCCAGCCTAGA  44 44
LOY45_RS13375 2917796 .. 2917807 -  -5.8  -3.54424   TTCTATTGGTTCAAA                GTCC CTGC GGAC                 TTCCCATCGCCGACT  58 162
LOY45_RS13360 2913017 .. 2913048 -   -13  -2.62184   TCGTGTGCGACAGCA      CGATGGCAGCTACC GATG GGTAGCTGCCAATG       GCCGCACTGAACTCG  73 236
LOY45_RS13345 2910363 .. 2910373 -  -5.4  -3.85698   GGGTGTCGTCACAAA                 CTCA GCC TGAG                 GCCAGGAAACTTCGT  59 303
LOY45_RS13340 NONE
LOY45_RS13335 2908766 .. 2908778 -  -4.1  -2.54276   ATCGTGAAGGAACAC                GATAC CTG GTACC                TATCACTGCGGTCAC  41 37
LOY45_RS13330 NONE
LOY45_RS13325 2907598 .. 2907613 -  -5.4  -3.79021   CAAAACCGGATGAAA              GCCCAA GCTC TTGAGC               GATTTCCTTTGATTT  59 218
LOY45_RS13295 NONE
LOY45_RS13290 NONE
LOY45_RS13285 NONE
LOY45_RS13280 2898957 .. 2898967 -  -4.6  -2.78463   AGCGTGGTCATGACA                 GGCC TGC AGCC                 AGCAGCGGGGTGTGG  44 7
LOY45_RS13275 NONE
LOY45_RS13270 2896275 .. 2896331 -  -5.2  -3.52896   TCATCACCGACACAA GCTGACCAGGGCGGCTGCAG-GTGCC GAGCAAT AGCACACTCCAAC-ACCCTGGCCACC ACCTGATCAGGTCCA  54 96
LOY45_RS13260 NONE
LOY45_RS13250 NONE
LOY45_RS13245 2887757 .. 2887771 -  -5.6   -3.5616   CGGAAAAACGCACAA               GCCATC GCT GCTGGC               CATAGCTTCATCATT  57 404
LOY45_RS13230 2886029 .. 2886042 -  -2.3  -3.55444   GGCGCATCTTTGAAA               CCGTG ACGT CACCG                ATTCCCGCACAGCTC  47 70
LOY45_RS13220 NONE
LOY45_RS13205 2881196 .. 2881208 -  -4.7  -3.19255   GCAACAGATATGCAA                GGCCC TGA GTGCC                CAGCCGATGCCGGGT  47 156
LOY45_RS13190 NONE
LOY45_RS13185 2873006 .. 2873037 -  -3.7  -3.53012   TTCCCTCCTGGGAAA     CACCGCGGCGAACGC GCTT GCGT-CGTCA-GGTG      TATAGCTTTCTGCTA  50 216
LOY45_RS13180 NONE
LOY45_RS13175 2871168 .. 2871186 -  -3.1  -3.08776   AACTGCGTAAAACCA             GGCCT GGCCGCATG AGGCC             GCCCCCTCAACTGAC  43 32
LOY45_RS13170 2870411 .. 2870425 -  -4.2  -2.73735   AAACACGCCTAACCA               TGGGGA CGC TCCGCA               TTGCGCTGGGTGAGG  44 4
LOY45_RS13165 2868317 .. 2868339 -  -8.4  -2.72855   GAAACCGCCGAAGCA           TCACCTGTCG CTG CGACTGATGA           AAATACTCCTGAGCG  57 226
LOY45_RS13155 NONE
LOY45_RS13150 2866701 .. 2866713 -  -5.5  -3.92075   AGCTTCAGGCAGAAA                CCCAG CAT CTGAG                CTGGACTTACGCTTG  62 124
LOY45_RS13125 2859727 .. 2859751 -  -2.7  -5.03314   TCGAGGGTCAAAAAA          TACCCCCGC CTGCACC ACGGGGGCC          TGTCAGCACAGCGGC  77 42
LOY45_RS13120 2857930 .. 2857941 -  -5.8  -4.08692   CAACGTTCGGGAAAA                TGCC GTCA GGCA                 ATCTGCTGGAGGATG  66 19
LOY45_RS13105 2854584 .. 2854599 -  -3.2  -4.18494   TACTTTGATGGAAAA              CTGAGA AATT TCTCGG               TGCCCCTGCACATGC  60 369
LOY45_RS13095 NONE
LOY45_RS13090 2850529 .. 2850583 -  -3.4  -3.69354   GTGCAGAAGGTCAAA GCCGCGATCA-TCGAGCTGACTGGCG AACTG CGCCAG-CGCCCCGAGTGGGCCCGGC AAGATGACCAGCCCC  54 52
        scpB 2848469 .. 2848497 - -10.1  -3.18264   CTGGGCATCGATGAA        CGCGCTGGGCACC GGC GGGGCCAAGTGCG        GGCTTACTGCCCGCG  65 271
LOY45_RS13065 NONE
LOY45_RS13060 2844325 .. 2844337 -  -4.9  -3.10464   TTATGAACGTGAAGA                GATAA CGC TTATC                GCATTGTGCCCAGGC  47 21
LOY45_RS13055 NONE
LOY45_RS13050 NONE
LOY45_RS13045 2841018 .. 2841065 -    -4  -2.75064   TGGCCCACGCAACGA GGCTATCGGCAGGGATGG AAAATAGTTGAG CCATCCCCGCCGCCCGGC CTACAGAAACTTGAT  43 26
LOY45_RS13040 2839940 .. 2839956 -  -7.9  -4.15222   AGCCTTGTCAATAAA              CGGGCAG GCG CTGCCGG              TTTGCGATGAACGGA  71 101
LOY45_RS13035 2839474 .. 2839492 -  -3.1  -3.58343   CCGATGATCTTCAAA             GCATTGC GCATG GTAATGC             CCTGTATGGTTGTTG  50 146
LOY45_RS13030 2836667 .. 2836687 -   -14  -3.16742   TCCAACGCCCATGAA            GCCCTGGG TGTCG CCCAGGGC            AATGCCCGGGTGATC  76 435
LOY45_RS13020 NONE
LOY45_RS13005 2833201 .. 2833213 -  -4.8  -2.74792   GCATCACTTCGAAAG                CTGG TTTGC CCAG                GACGAGGCGGTGCCG  44 279
LOY45_RS12995 2830713 .. 2830741 -  -6.6  -3.39327   GGGGGACATGCAGAA        CCACTGCCCGCA CCTGT TGCAGGCGACGG        TGAGCGCCTTTATCG  55 391
LOY45_RS12985 NONE
LOY45_RS12980 2828206 .. 2828218 -  -3.3  -4.20768   AGCCTGAAGAAAGAA                GGGGT GAA AGCCC                GCGTGGAGCAGCGCC  64 324
        moaA NONE
LOY45_RS12920 2814269 .. 2814302 - -13.3  -2.52543   ATCGCTGGCAAGCCA     GCTCCCAC-AGGTC TTGCGCC GACCTTGTGGGAGC     CGGTCTTGCCGGCGA  75 153
LOY45_RS12905 2810632 .. 2810663 - -15.3  -2.70932   TCCGGTCGGCAACTA      TGACCGCC-TGCTG GATTT CAGCACGGCGGTCA      CCGGCGGGCTGTTCT  75 97
LOY45_RS12875 NONE
LOY45_RS12870 NONE
LOY45_RS12865 NONE
LOY45_RS12860 NONE
LOY45_RS12855 2796499 .. 2796534 -    -6  -2.91452   AGTACGCCAAGCAGA    TGCCCGGCGGTGCCTA TGGC CAGGCAGCGCTGTACA     GCAAGCACTTTCCGC  47 498
        napE NONE
LOY45_RS12835 NONE
        napA 2792172 .. 2792194 -  -4.1  -3.02511   GGCAGGCTGCGAATA          GGCATGACGG TTCT CC-TCAGGCC           ACGCTGATCAGCTCG  44 19
LOY45_RS12825 NONE
LOY45_RS12820 2791007 .. 2791046 -  -9.5  -2.52543   ATCGCTGGCAAGCCA GCTCCCACA-A-TGGATGT GTGT ACACCCAACCTGTGGGAGC  GGGCTTGCCCCGCGA  62 64
LOY45_RS12815 NONE
LOY45_RS12810 NONE
LOY45_RS12805 NONE
LOY45_RS12800 NONE
LOY45_RS12795 NONE
LOY45_RS12790 2784875 .. 2784919 -  -5.6  -3.35679   CGCCGGCAGCGACAA CCGCAGCGCAGACCGCAGCCG CTAC CTGCTGCAGG-TGCATTACGG CCGACGCATGGTCGC  53 156
LOY45_RS12775 2782226 .. 2782236 -  -6.8  -3.25823   TCCGGTGTACACCAA                 CCCA CTG TGGG                 AGCAACTGTCTTGAT  56 40
LOY45_RS12735 2772841 .. 2772862 -  -2.1  -2.70932   TGCGGCGTTCAACTA           CCAGGCGCC GTTT GGCGGCTAC            AAGACCTCGGGCAAT  38 118
LOY45_RS12665 NONE
LOY45_RS12660 NONE
LOY45_RS12655 2752610 .. 2752622 -  -3.3  -3.86916   CAGGATCACATCAAA                CCGGT GGG AGCGG                GCTTGCCCCGCGATG  56 53
LOY45_RS12635 2749977 .. 2749992 -  -6.1  -3.28712   CTGTCCGGTGCACAA              GCTGC TCAGCG GCAGC               ATCGTCATCGACAGT  51 52
LOY45_RS12625 2747778 .. 2747795 -  -4.1  -2.83409   CATCAATTGAGTATA             GTGCTAC TTGA GCAACAC              CCGGCGCTTGGTCAG  43 11
LOY45_RS12620 2746638 .. 2746657 -  -4.2  -3.30124   GCGCAGGGCGTACAA            GCGGT-CGC ATG GCGCACCTC            GTTCAGGGAAGCGTG  49 28
LOY45_RS12615 2745785 .. 2745817 - -19.2  -3.05384   CTTTGCCTGAGTGAA      CGGCTGCACACCGC TTGAT GCTGTGTGCAGCCG      ACTGCCTAGAACGGG  95 31
LOY45_RS12600 2741801 .. 2741845 - -17.2  -3.31322   TGTAAGGTTGTAGAA CGGCCTTGCCTCCCGCTG GCGCAATTT CAGCGGGAGGCAAGCGCG TTTGCAGGTGCCCCG  91 7
LOY45_RS12580 NONE
LOY45_RS12575 NONE
LOY45_RS12570 NONE
LOY45_RS12565 2725418 .. 2725432 -  -4.2  -3.53012   GGCTGCTGGCCTAAA               GGTTGT TGT ACAGCC               ACTTGGGCATGTAGT  52 6
LOY45_RS12560 NONE
LOY45_RS12555 NONE
LOY45_RS12550 NONE
LOY45_RS12545 NONE
LOY45_RS12540 NONE
LOY45_RS12535 NONE
LOY45_RS12530 NONE
LOY45_RS12525 2715882 .. 2715904 - -12.6  -2.73875   GGGCGGCGAACACTA           GGCCGGCGCG TTT CATGCCGGCC           GCCGTTGCAGCATCT  74 15
LOY45_RS12520 2713936 .. 2713948 -  -4.8  -3.53811   TGGATTTTGCTCAAA                GCAC TCATG GTGC                CTCCTGTTTCCAGCA  52 55
LOY45_RS12515 NONE
LOY45_RS12510 2711595 .. 2711608 -  -3.7  -3.03159   GCAACGTCTTGAACA               CCCGC TTCA GCGGC                CCGATGTTGTGCCCA  44 494
LOY45_RS12495 2706039 .. 2706054 -  -6.2  -3.55622   GGGAATGGCGCGAAA              CTGTAT GTTT ATACAG               TTTCGGCGATTCGGC  58 74
LOY45_RS12490 2705485 .. 2705516 - -14.4  -3.76125   CCACCTTAATGCAAA      GCCCGGCTGGCGAA CATG CCCGCCAGCCGAAC       CAAGCGCTGCTTACT  91 36
LOY45_RS12485 2704241 .. 2704257 -    -5  -3.16564   TTTGCACTCGACCAA              CGGCGC TACTC GCGCCC              GCGCATGAAGAACCC  50 14
LOY45_RS12460 2697415 .. 2697433 -  -3.8  -3.02144   GGACGTGGCGTAAGA             GTGTTCAT GGC ACGAGCAC             CACTTCTTCGCTGTC  44 11
LOY45_RS12455 NONE
LOY45_RS12450 2694648 .. 2694661 -  -2.3  -3.04461   GAGCGAGCTTGAACA               TGGTG GTGC CTCCA                GGTTTAACGGTATTG  41 29
LOY45_RS12445 2693114 .. 2693148 -  -5.8  -5.04385   TATAGGGGTAAAAAA    GGAACCGTGAC-CACC CTGTC GGTGAGTCACGG-TCA    AGTGGGGGGAGAATC  86 146
LOY45_RS12440 NONE
LOY45_RS12435 2691550 .. 2691563 -  -4.5  -3.54919   AACGAGCGCCGCAAA               CCGAC AAAG GTCAG                CGCAATTAATTTTGC  54 61
LOY45_RS12430 2688500 .. 2688527 - -13.4  -3.64871   AAAATAAAATATTAA        CGAAGCAGGGCG GTAA CACCCTGCTACG         CAGGTTGCGACGAGC  84 57
LOY45_RS12425 2686019 .. 2686033 - -12.8   -4.0641   CGTCAGCTAGATAAA               GGCCGC TGC GCGGCC               TATCGCCGGCAAGGC  91 121
LOY45_RS12420 NONE
LOY45_RS12415 2681758 .. 2681783 -  -6.1  -3.28712   GGTGGTGCGGCAGAA         CCACGACCTGTC GTT GACCG-CCGTGG         CCAGCATGCAGTCGA  51 146
LOY45_RS12400 2678736 .. 2678752 -  -5.7   -4.4009   GGTGAGCCGAGAAAA              CAGCCAG GGT CAGGCCG              TTCGCGCCAGCAGCG  72 18
LOY45_RS12395 2677228 .. 2677252 - -11.5  -2.52543   ATCGCTGGCAAGCCA          GCTCCCACA CCGAACC TGTGGGAGC          TGGCTTGCCAGCGAT  67 66
LOY45_RS12375 2672588 .. 2672600 -  -5.5  -3.08211   AGCGGCGTAAAACCA                CAGCA GGA CGCTG                GCCAGTTGCATCGGC  50 225
LOY45_RS12365 2669737 .. 2669758 - -14.5  -2.62515   AACTGGTCGACAGCA           TCCTCGGCA GCTT TGCCGAGGA            ACTCGATGGCCGCGG  74 438
LOY45_RS12350 2666809 .. 2666822 -  -5.2  -2.77899   CTGCGGCATGAATCA               GGCC CTCACT GGCC                GTTGGACTGAACGAT  47 17
LOY45_RS12345 NONE
        mobA 2662998 .. 2663014 -  -5.1  -2.62184   CCCGCTCCCACAGGA              CCACACA ACC TCTGTGG              GAGCGGGCTTGCCCC  46 48
        ccoN NONE
LOY45_RS12300 2654131 .. 2654147 -  -3.5  -3.80733   CTCACCCTACAAGAA              CCAGGTG TAT CGCCAGG              CAGGTCTAGGCCGCA  54 362
LOY45_RS12290 2650688 .. 2650730 - -16.5  -3.62597   TGCACCGGGCAACAA CCAGGCCATTGGCGGCC-TCA AGG TGATGACCGCCAACGGC-TGG TTCGCCGCGCGGCCG  91 262
LOY45_RS12255 2639227 .. 2639239 -  -3.3  -6.13503   GATCAAGAAAAAAAA                GGCCC ACC AGACC                AAACAGCATGGTGAT 100 393
        betI NONE
LOY45_RS12245 2637150 .. 2637164 -  -4.2  -3.61371   AAACCGCACCCTAAA               GCGTTG ATC CAAAGC               TTTTTTCGATTTCGG  54 6
LOY45_RS12240 2635254 .. 2635269 -  -2.5   -4.1899   CTACCTGACGCAAAA              GCC-GG TTATC CCTGGC              AACACAGCCGGCCCG  56 173
LOY45_RS12230 2633186 .. 2633200 -  -3.4  -3.01791   ACTGGTTCTTCAAGA               CCGCGC CCG GCGCCA               CCCCGGCCACCTTGT  42 452
LOY45_RS12210 NONE
LOY45_RS12205 2627044 .. 2627061 -  -8.4  -2.74605   GGCCTCGAAAAGGCA             CACGGC TTCGGG GCCGTG              CAAGGGCGTGCTGTG  57 260
LOY45_RS12185 2624568 .. 2624592 -  -6.3  -3.05715   AACCGGTGGATTCAA          CCCCAGAGCCC TTC GAAACCTGGGG          CGATTCTCCGTGCCG  52 97
LOY45_RS12180 2623480 .. 2623507 -  -7.6  -3.53012   CGTTTGCCGGGCAAA        GCGACCAGGCCG GCAC CGACATGACCGC         CGTGCAAAGCACCCG  60 481
LOY45_RS12125 NONE
LOY45_RS12120 NONE
LOY45_RS12115 NONE
LOY45_RS12110 2598733 .. 2598790 - -12.2  -2.92192   GTCCACCCAATTATA GGCAGTGGGCAACAATCCCTGTC-GGCTA TTT TGGCCTGGCAGGGATTGTTG-CCAC-GCT CACGCCTGCAAGGCC  73 25
LOY45_RS12105 2598245 .. 2598280 -  -6.9  -4.07568   GCGCGTGGCGCAAAA   CGGCC-GACAGCACCCT CCCC AGGG-GCTATCAGGTCG    AATCGATCAAGCGAA  68 136
LOY45_RS12100 NONE
LOY45_RS12095 2594847 .. 2594874 -    -7  -3.77831   CGAGCAACAGCCAAA        GGCCATAGCGCTT CAC AGGC-CCATGGCC        GCAAGCAGGCGCTCG  63 10
LOY45_RS12090 2593507 .. 2593521 -  -8.5   -2.8511   TACCAGACGATGAGA               GGGCC TGTAG GGCCC               TGCATCAATCTAAAG  57 35
LOY45_RS12075 NONE
LOY45_RS12070 NONE
LOY45_RS12065 2583993 .. 2584018 - -16.1   -5.4251   GTCAGACACAAAAAA         GCCCCGCCAGC GTGA GCCAGCGGGGC          AAAAGGCCGGTCAGA 100 64
LOY45_RS12060 2582640 .. 2582652 -  -9.1   -3.0701   ATAACGCTCAGGCAA                GCACC GCC GGTGC                CTGCTGTCCTCGCAC  63 105
LOY45_RS12055 NONE
LOY45_RS12050 NONE
        clsB NONE
LOY45_RS12040 2577698 .. 2577708 -  -4.6  -2.82516   TGGTCGACGACGAGA                 GCAC CTT GCGC                 TTGCTGATCAAGGAG  45 349
LOY45_RS12025 2574558 .. 2574576 -  -5.9  -3.51329   TATGCTGAACGAGAA             CCCGATC TTCCT GGTCGGG             TGATACTCGCCAGCA  56 118
LOY45_RS12020 2573685 .. 2573695 -  -6.8  -3.19018   AACATCCCAACCCAA                 GGCT CAT AGCC                 CCGGGATTCCGTGAA  54 61
LOY45_RS12005 2569905 .. 2569925 -  -6.7  -4.77165   GGTTGCAGAAGAAAA            CAGAGCGGG TAA CCCGCGATG            ATCTCAGGCCGCAGG  79 42
        rarD 2568974 .. 2569010 -  -7.8  -3.44848   GCGGTGGAGGAAAGA    CGGGTGCGCCAGGTGC GCCTT ACACCGAGCGCCGCCG    TTGACGCAGCAGGTG  61 8
LOY45_RS11990 2566527 .. 2566541 -  -9.2  -3.53224   CAGCGCGCCTTCAAA               CGCCAC CTG GCGGCG               ACGCCGGGGCATTAC  65 44
LOY45_RS11975 NONE
LOY45_RS11970 NONE
LOY45_RS11965 2561531 .. 2561579 -  -7.5  -2.82519   CCAGCAGATCAAGGA CGAGGTGCGCCGGGC-CATGGCGT TCGA ATGCC-TGCGCCAGACGCACCT-G AGTATTGCCGAAGTC  52 135
LOY45_RS11955 NONE
LOY45_RS11950 NONE
LOY45_RS11945 2557576 .. 2557589 -  -4.5  -2.82666   TGAAATGAAAACCTA               CGACG TGAT CATCG                AGATACCGGAATCCG  43 302
LOY45_RS11905 NONE
LOY45_RS11900 2546546 .. 2546558 -  -2.6  -3.01712   GCGTCTGGCCGAACA                GCCG CGCAT CGAC                AATCTGGTGGTCATG  41 207
LOY45_RS11885 2543810 .. 2543842 - -17.7  -2.91144   CGATTGCGCAAACGA      TTTGCGCCCCGCCTT TAC AGGGCGGGGCGCAAG      AATTAGAAGCCCGCC  89 121
        gloA NONE
LOY45_RS11870 NONE
LOY45_RS11865 2539539 .. 2539568 - -16.4  -2.85351   TTTGGGTATACCACA       GCGTCGGCCCGG TTGGAT CCGGGCCGACGA        ACGTGACGGTCAGCG  86 35
LOY45_RS11860 2538879 .. 2538890 -    -3   -3.9461   TTGCGCGAATAATAA                TGAT TATT ATCA                 ATTTTACCGGCGATC  56 359
LOY45_RS11850 NONE
LOY45_RS11845 NONE
LOY45_RS11840 NONE
LOY45_RS11835 2535568 .. 2535586 -  -9.5  -3.08996   CAGCGCCACCGAAGA             GCAGGCC CTGGT GGCCCGC             GAAGTGGACCGCAAC  60 163
LOY45_RS11770 NONE
        narL 2516759 .. 2516788 -  -4.7  -4.09685   GGGCAGTCGGCAAAA       GGGGCTCAGGCGC TTTG GCGCAGGTGCTCC        ATGGCCCACACCGCC  61 1
LOY45_RS11760 NONE
LOY45_RS11705 NONE
LOY45_RS11700 2505314 .. 2505337 -  -5.8  -3.15544   CGCCAGCCTGAGCAA          CTGCCGCTGC GTTT GCCGCAGCTG           TATCGGCAGTTGACC  52 46
        nirS NONE
LOY45_RS11660 NONE
LOY45_RS11655 NONE
LOY45_RS11650 NONE
LOY45_RS11645 2495669 .. 2495679 -  -2.4  -3.18945   GGGATCGAGAATACA                 GCTC ATG GCGC                 GTCTCCCAGGGCAAA  42 17
LOY45_RS11640 NONE
LOY45_RS11635 NONE
LOY45_RS11630 NONE
        nirJ NONE
        cobA NONE
LOY45_RS11615 2490192 .. 2490211 -  -9.3  -3.21099   TTGCCGGACGACGAA            TTGGCCC TGGCCC GGGCCAA             TGGCACCCTGCAGCG  62 485
LOY45_RS11590 2484500 .. 2484513 -  -5.9  -5.04601   CGCAGAAACGAAAAA               GCCCC GGGA GAGGC                TGGCTTGCAGTTTTC  86 39
LOY45_RS11585 2482574 .. 2482608 - -23.6  -3.18681   GCGTAAGCCGATCAA     CCCGGCGAGCCCGCTA CAA CAGCGGGCCCGCCGGA     CGTGTCAGAGCTTGG 100 30
LOY45_RS11580 2481791 .. 2481812 -  -3.1  -2.92613   GGCGATGGTAAATGA           GTTGACATCA AAA TGATATCA-C           TGGCGTGTACAACCG  42 41
LOY45_RS11575 NONE
LOY45_RS11570 2477972 .. 2477983 -  -5.8  -3.90744   CGTTTGCGCAAACAA                GAGC AACC GCTC                 AATGAACTGCAGACG  62 220
LOY45_RS11560 2476846 .. 2476870 -  -4.9   -4.3898   AGCACCCCGACAAAA          CCTTCATCGGC AAG GTCGAGAAAGG          CTTTGACTGGATGGG  68 315
LOY45_RS11550 2474338 .. 2474357 -  -5.6  -3.24329   GACGTTCAATCAATA            GCGCCGCA TTCT TGCGAAGC             GACAGAATTGGACGT  51 130
LOY45_RS11535 2471871 .. 2471884 -  -9.5  -5.38047   TAGTGATAGAAAAAA               GGCCC TTAG GGGCC                TTTTTTCGTTTCTGC 100 300
LOY45_RS11505 2466080 .. 2466096 -  -3.6  -3.05596   CAGGTGTGCAGTCAA              TCAGGC GGGGT GCCTGG              GTGAATCGCCGGGTA  46 95
LOY45_RS11500 NONE
LOY45_RS11495 NONE
LOY45_RS11490 NONE
LOY45_RS11485 NONE
LOY45_RS11480 NONE
LOY45_RS11475 NONE
LOY45_RS11470 NONE
LOY45_RS11465 NONE
LOY45_RS11460 2454328 .. 2454348 -  -2.5  -3.02144   CGATGGCGCGGAACA            GGCCGTT GTTGACG AACGGCT            CGAACGGCCAGCTGC  41 307
LOY45_RS11440 2450089 .. 2450105 -  -3.6  -3.85698   GGTTTTTTCCACAAA              TTCGCC GGCAA GGCGTA              CGAAGACAAGCGTCC  56 391
LOY45_RS11405 NONE
LOY45_RS11400 2440895 .. 2440905 -  -2.4  -3.24146   GCTGGTAATCAAAAG                 GGTC CAT GGCC                 TCAGCCTCCTGCCGC  44 26
LOY45_RS11395 2439285 .. 2439300 -  -6.1  -2.71712   GGGGGGGCGCTAAAC              CGACG TGTAAC CGTCG               TTCCTTAACCTAGGG  48 73
LOY45_RS11390 2438351 .. 2438384 -  -7.3  -3.55866   GCACAGTGAAATCAA     CGCCAGCGCAGCC GGGCGCGG GGCGGCGCTGGAA      AGCCTGACGCGGCTG  63 454
LOY45_RS11380 NONE
LOY45_RS11375 NONE
        hpaE NONE
        hpaD 2433786 .. 2433822 -  -3.7  -2.53911   GCAAGCGGCAAGCTA    CAAGCGGCAAGAG CGCGTGCTCTT CACTTGCAGCTTG    TGGCTTGAAGCTTGT  41 57
LOY45_RS11360 NONE
LOY45_RS11355 NONE
        hpaH NONE
        hpaI 2430307 .. 2430345 -    -9  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAAGGTCC TCTGTAAACC GAACCT-GTGGGAGC   TGGCTTGCCAGCGAT  58 54
LOY45_RS11335 NONE
LOY45_RS11330 2427941 .. 2427978 - -15.6  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTTCGG TGCATG CAGTACCTGTGGGAGC    TGGCTTGCCAGCGAT  81 49
LOY45_RS11295 2420902 .. 2420912 -  -8.2  -2.55668   GACGCCGATATCAAT                 CCCG GCG CGGG                 CACCGGTACCGGCAG  53 101
        zapE 2413102 .. 2413125 -  -9.6  -3.01712   CCCGTTCGGGCAAGA          TCCTGCGC-GC GGT GCTGCGCAAGA          TTGCCGACCAGCAGC  59 245
LOY45_RS11245 2409706 .. 2409720 -  -2.8  -4.07568   TGGTCTCGGCGAAAA               TCGG CTACACC CCGA               AAAACCCGGTCAGCA  60 210
LOY45_RS11225 2405180 .. 2405214 -  -5.2  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGGTAAGC AGGA GCT-A-C-TGTGGGAGC    TGGCTTGCCAGCGAT  46 56
        hydA 2400506 .. 2400537 -  -8.8  -2.52543   ATCGCTGGCAAGCCA      GCTCCCACAG GTTCGGCGGTGT CTGTGGGAGC       GGGCTTGCCCCGCGA  58 47
LOY45_RS11205 NONE
        preA 2397755 .. 2397785 - -19.8  -2.54896   CGCTGAGCGAATGCA       CGCGAGGGAGGATC AAT GATCCTCCCTCGCT       GTTTTTACCTTATGC  95 42
LOY45_RS11190 2396119 .. 2396147 -  -2.9  -3.03124   CTGGAGCGCCGAACA        GGGCGTCGATGTG ATC CTCGCCAACGCCT        CCCTGCAGTGGTTGC  42 486
LOY45_RS11175 NONE
LOY45_RS11170 2392465 .. 2392505 -    -7  -2.64794   GGCAAGGCGAGAGCA GGGCAA-GGCG-CGC-ACC TTAGCC GATTGCGCCGCCCTTGCCC AGCCACTCAACCGCG  50 32
LOY45_RS11165 NONE
LOY45_RS11160 NONE
LOY45_RS11155 2388486 .. 2388508 -  -9.8  -2.52543   ATCGCTGGCAAGCCA           GCTCCCACAG GTA CTGTGGATGC           TGATCTTGTGGGAGC  62 69
        dkgB 2386834 .. 2386878 -    -2  -3.01712   CTGCGGCCGGCAACA CCGCCTGCAGTACCTGAACCTG GCC CAGG-CCTG-CACCGCCCGCGG TTAGTCCCAGGCCGG  41 26
LOY45_RS11140 2385220 .. 2385261 -  -4.4  -3.14132   TGTGCTCTCCATCAA GGTCT-GCGGTA-GGCGGCA ATAG CGCTACCTTACCGCCAGGCC GGGCGAGCCCGAATA  47 70
LOY45_RS11135 2384689 .. 2384713 -  -9.9  -2.94218   ACCTTGCAGTACACA          CCGCCGGTGAT GCC AACACCTGCGG          GCTGATTGAAACACT  65 78
LOY45_RS11115 2380544 .. 2380575 -  -3.7  -3.76224   CTGGTATGGAGCAAA      GGCA-GGCGCAA GCTGGTCAT TGGCGCCATGCC      GCCGTTTCGCCAGCC  56 184
LOY45_RS11105 NONE
LOY45_RS11100 NONE
LOY45_RS11095 2375568 .. 2375579 -  -4.4  -2.75562   AGAAACGCCTCAAAC                CATC GACA GATG                 CTGCTTGCGCGTCGG  44 8
LOY45_RS11070 2368894 .. 2368912 -  -5.8  -2.52543   ACGGTGGTGAAGCTA             TCGCCGGC AAG GCCGGCTC             CCACAGAGACCTGTA  48 95
LOY45_RS11065 2368066 .. 2368078 -  -5.5  -4.06182   CTACTGACAAAAATA                CTAGG TAC CCCAG                CTATTCATGGCAGCA  64 26
LOY45_RS11060 2366998 .. 2367012 -  -3.4  -3.75015   ACAACGGCTATGAAA               CCCCGG TAG CCATGG               AGAAAAAGCTCAAGG  54 127
LOY45_RS11050 2364552 .. 2364592 -   -17  -3.07113   GATCATGCGAGGCAA GCCTTGGCAGTGGCGCGAA AATA TCCGCGCCACTGT-AAGGC  AAAGGCGCCTGCGGT  89 89
LOY45_RS11045 2363470 .. 2363504 -  -2.7  -4.56597   TGCCGGTTCGAAAAA    GAGCATG-GCCACCGG CGTG CCGATGGCTCAGGTGC     TGTTCGTTGGCGGTG  67 146
LOY45_RS11035 NONE
LOY45_RS11030 NONE
LOY45_RS11025 2358586 .. 2358609 - -17.4   -4.1822   TGGCAGGTGAATAAA          GCGCCGCCGG TGGG CCAGCGGCGC           ACAGACAATCTACTT 100 35
LOY45_RS11020 2358135 .. 2358151 -  -3.5  -3.23984   CAAACCCAGCAGCAA              CAGCCTC ATA GCGGCAG              GGCCTGAAGCATGAC  48 14
LOY45_RS11015 NONE
LOY45_RS11010 2356202 .. 2356221 -  -4.8  -3.99374   GTCGACCAACAACAA            CCGCGTCG ATGT CGCCGCTG             AAGGCCTGGATTACG  62 476
LOY45_RS11000 2354476 .. 2354490 -  -3.5  -3.01726   CCGGCGTACACAAAT               CCACT GTGGG AGCGG               CGGTGCGACGCCTCG  44 56
LOY45_RS10985 2351585 .. 2351599 -  -4.2  -2.87146   CAGAACACCACCATA               CCGACA ATT TGTCGC               AGCAACGAGTGCCTT  44 47
        ppnN 2350009 .. 2350023 -  -4.2  -5.10765   AAATAAACAATAAAA               GCCC GATGACT GGGC               CGGTGAAGAGTCGGC  81 163
LOY45_RS10975 2349054 .. 2349108 -  -2.8  -3.35996   CAGCGCTATCCAGAA GATCCCCACCAGCCTGGTCGGCG CCTTGTCGTT CATCTACCCGG-TGGTGGCGATC CTGGTCGACTGGCTG  47 209
LOY45_RS10965 NONE
LOY45_RS10960 2346941 .. 2346959 -  -2.4  -3.86194   AACCTGTTCGATAAA             CGCTATTA CAC CAATATCG             GTTTCTATAATTCGA  55 227
LOY45_RS10940 NONE
LOY45_RS10935 NONE
LOY45_RS10930 NONE
LOY45_RS10925 2339022 .. 2339038 -  -2.1  -4.62069   CCGGCAGCGGAAAAA              GCCATCG TGC CGCCGAC              CGTTGCCGATTTGAA  70 153
LOY45_RS10915 2337729 .. 2337776 -  -4.8  -3.53811   TCGATCGCTGGCAAA GCCAGCTCCCACA--GGTCCGG TACATG CAGGTCTATTGTGGGAGCCGGC CTTGCCGGCGATGAG  52 104
LOY45_RS10900 2332622 .. 2332646 -  -7.8  -3.15249   GACACCCTGGATCAA          GGCATCGCTG CCGCC CAGCAAGGCC          TGGGTGTGGCCGTGG  55 240
LOY45_RS10890 2331225 .. 2331246 -  -2.1  -3.63627   GGCCTACACCCGAAA           GCGTAGCCC GTCA GGGCAACAG            TTGCCGGAGGTTGTA  48 14
LOY45_RS10885 NONE
LOY45_RS10880 NONE
LOY45_RS10875 NONE
LOY45_RS10870 NONE
LOY45_RS10865 2327557 .. 2327570 -  -3.7  -2.62184   CGTCGTTCGACATCA               TCCGC TACA GCGGC                GCGGTCTACCTGTTA  41 479
LOY45_RS10850 2324941 .. 2324958 -  -4.1  -3.54424   TCGCATGGCTGGAAA             GCACTGCC AAT GACAG-GC             AGGCCGAAGGCGTCG  51 311
LOY45_RS10815 2317336 .. 2317361 - -15.5  -3.41978   TCATAACGCAAGCAA         GGGGTGCAG-GC AGT GCGCTGCACCCC         TTTCAACACGTTCAG  90 37
LOY45_RS10805 2314102 .. 2314122 -  -4.6  -3.34013   GACGCTTTCAAGCAA            CACGCCGA AGAGG CCGCCGTG            GTGTTCAAGGAATGC  51 416
LOY45_RS10790 2309960 .. 2309973 -  -2.4  -2.82015   GGTACAGCCAGCACA               TCAG TGTTGC CTGA                ATTGCGACCGCTGCG  39 403
LOY45_RS10785 NONE
LOY45_RS10780 2309173 .. 2309193 -  -3.9  -2.56596   GGCTGCACCAACTGA            CGCGAGGAA CGG TTGCTGGCG            TTTACGCACCCATCC  42 40
LOY45_RS10775 NONE
LOY45_RS10770 NONE
LOY45_RS10765 2307130 .. 2307142 -  -4.8  -3.92324   CGGCCGAAGACGAAA                GCCT GGTCG AGGC                CGACAAAGTATTTGT  60 372
LOY45_RS10750 NONE
LOY45_RS10745 2303740 .. 2303773 -  -9.6  -4.07687   ACTGCTGCGGGAAAA     CCGCTTCGACTACGA AATCA TCGTCGCCGA-GCGG     GACGGCCCGGTGACC  79 245
LOY45_RS10725 2301087 .. 2301102 -  -2.4  -3.51032   AGTGCGCAAGGATAA              GGCTGC GGCG GCTACC               TGAAAAGCAGGTGCG  46 75
LOY45_RS10720 NONE
LOY45_RS10715 2299408 .. 2299418 -  -8.2  -3.21924   TCAGCCGCTACAACA                 GCCG CGT CGGC                 CAGGATGATTACGCC  59 190
LOY45_RS10680 NONE
LOY45_RS10675 NONE
LOY45_RS10670 NONE
LOY45_RS10665 NONE
LOY45_RS10660 NONE
LOY45_RS10640 2281190 .. 2281203 -  -2.3   -4.8622   GGCTTCAACGAAAAA               GGCAG CGAA CTGGC                CCTCGACGTCGACGG  76 350
LOY45_RS10630 NONE
LOY45_RS10625 2278165 .. 2278178 -  -6.7  -3.05596   CACCGCTGGACGGAA               TGGGA AGCG TCCCA                CAGTAAAATCGGATT  54 80
LOY45_RS10620 2277210 .. 2277233 -  -2.2  -3.88498   GCTCCATAGATCAAA          TCACCCACCC ACTC GTGTGGGAGC           GGGCTTGACCCGCGA  54 146
LOY45_RS10615 2276649 .. 2276665 -  -3.6  -2.69151   GCGCCGCAGACACTA              CCCACG ACAAG CGTGCG              TGACCTTACGCTGGT  42 270
LOY45_RS10610 2275647 .. 2275685 -  -8.9  -3.21962   ACAGCAGGAACGGAA  TCCGCCAGC-CCCAGGCCT CGA AGGCCTCGGTGCCGA-GGA  TAGTGCGGCAGGCGA  65 314
LOY45_RS10600 2272438 .. 2272496 - -23.6  -3.05046   GGAGGTCGGTAAAAG CCTCATCGCGGGTCAAGCCCGCTCCCACAG AAG CTGTGGGAGCGGGCTTGACCCGCGAT---- TGGGGCGATGCGATT 100 40
LOY45_RS10595 2271069 .. 2271079 -  -2.4  -4.08216   TCATTCCTTTGAAAA                 CGGG GAG CGCG                 ATCATCGCCTGAATC  56 88
LOY45_RS10590 2270314 .. 2270326 -  -3.3  -3.76125   GCAGCGCAATCGAAA                TGGCG GAT CGGCA                CTGAAGCCTTCCTGG  54 319
LOY45_RS10560 2265803 .. 2265821 -    -3  -3.78934   CTGGCTTTAGAACAA             TTGTGCGC GCG GCTCACAT             CGGCAACGAGCGGTT  53 20
LOY45_RS10555 2263524 .. 2263542 -  -5.9  -3.01791   ACGCGGTGGCCAACA             TGGGCGC CATCT GCGACCA             CTACAAGGTGTTCTC  48 177
LOY45_RS10525 2257868 .. 2257910 -  -6.9  -2.80074   TCGTGGAGAACATCA CCCTGGCCTGGCCCG-AGCAG CAC CTGCTGCTGGTCGAGCC-GGG TTCGTGGCTGCATGG  49 299
LOY45_RS10510 2255266 .. 2255283 -  -5.5  -2.94695   GCATCATCAACCAGA             TCGCCAT CGCC AAGGCGA              TTTCCTGGCCGGTGC  48 459
LOY45_RS10500 2254082 .. 2254113 -  -2.3  -3.29325   GGGGCAGAAGGAATA     TGCCAGTGCCGAGGC GTTG GCCACAGCACT--CA      AGGCGTTGCCGCAGC  44 182
LOY45_RS10490 2252611 .. 2252631 - -14.7  -3.02511   CCCACGCCTTCAACA            TCGCCGCGA TCA CCGCGGCGA            TCTGCACCGGCAAGG  79 423
LOY45_RS10480 2249759 .. 2249777 -  -5.8  -3.17212   CTACGAGTGCATCAA             CTGCCGGC GCA GCCTGCCG             CACGTCAACACCTGG  49 433
LOY45_RS10465 NONE
LOY45_RS10460 NONE
LOY45_RS10455 2245923 .. 2245942 -  -2.7  -3.33969   TAAGGCAGGCGAGAA            CCTCAGG TGATTT CCCGCGG             CGACTGGCCGAAGCG  46 8
LOY45_RS10450 2243379 .. 2243393 -    -5   -3.8512   CATGGACGACAACAA               CAAAGA GCG TCTTCG               CCTGTATCAACCTGG  60 235
LOY45_RS10425 2239411 .. 2239445 -  -8.5  -3.05816   CCAGCGGTGAGCGAA    CCGACGGCCAGTTGCA GGCA CGCTACTGGTCG-CGG     GGTGACTACAACTAC  57 465
LOY45_RS10405 NONE
LOY45_RS10400 NONE
LOY45_RS10395 NONE
LOY45_RS10390 NONE
LOY45_RS10385 NONE
LOY45_RS10380 2230981 .. 2230999 -  -4.6  -3.31792   CGACGACCGGCAGAA             GATGATAA CGA TTGTCATC             TGTCGGCGTCGACCG  49 54
LOY45_RS10375 2229604 .. 2229616 -  -3.3  -4.43477   CCGAGTCAATGAAAA                TCCTC GCC GAGGC                CGACGGCATCTATTA  66 134
LOY45_RS10365 2227931 .. 2227970 -  -3.4  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAGTTCCGGTG TACA CAAATCTACTGTGGGAGC   CGGCTTGCCGGCGAT  39 63
LOY45_RS10355 2225640 .. 2225661 - -14.5   -5.4111   AAGAACCATAAAAAA           GCCCAATCC GCAG GGATTGGGC            TCAAGCGTGGCTGGG 100 64
LOY45_RS10350 2225075 .. 2225088 -  -9.5  -3.32844   GTTGCCACTGGAGAA               GGCGC CATT GCGCC                GTCAGGCCTGAGGGT  68 27
LOY45_RS10330 2222364 .. 2222385 -  -5.7  -2.54896   GGGGGACTCAACTCA           TCAGGCCAG GGCC CTGGCCGGG            TTTCGGGTAAGGCGC  48 4
LOY45_RS10325 2221505 .. 2221517 -  -9.1  -3.05384   CTGGTGGTGATCGAA                CGCCA GCA TGGCG                ACGCCATGTACCTGC  60 108
LOY45_RS10290 NONE
LOY45_RS10285 NONE
LOY45_RS10260 2205402 .. 2205433 - -15.8   -5.1356   GGGCAGGAACAAAAA      CAGGCCGAGCCCCG GCGA CGGGGTTCGGCCTT       TTTGTTTCAGGAATG 100 32
LOY45_RS10250 NONE
LOY45_RS10245 2202561 .. 2202581 -  -9.9  -3.05384   GTGGGCTTGAGCTAA            TATTTAGCT GTA AGCTAAATA            TTCGTCAATGGCTAA  66 113
LOY45_RS10240 2201578 .. 2201609 -  -5.8  -3.32844   GGGCGTAGGGCAGAA      GCTGCAGGGCCTGAA TTT TTCCGACCCTGG-GC      AGTTGCTCGACGCTG  53 242
LOY45_RS10230 NONE
        aguB NONE
LOY45_RS10220 2197740 .. 2197755 -  -2.5  -2.70354   TGTTTGAGAAAGGTA              CGACG GGGTGT CATCG               GTATGGCTCTCGTGG  38 48
LOY45_RS10215 NONE
LOY45_RS10210 2195935 .. 2195952 -  -6.9  -3.49756   TAACAACGAGTACAA             CAGGCCG ATAT CGGGCTG              CTTATGGCTGCAACT  58 27
LOY45_RS10205 NONE
LOY45_RS10200 NONE
LOY45_RS10195 NONE
LOY45_RS10190 NONE
LOY45_RS10185 2189327 .. 2189344 -  -2.5  -3.34398   CGCGGTTGTCAAACA             GGGCTGC TGGT GCTTCCC              GGGGAGCCTGCGGCA  44 69
        yghU 2188362 .. 2188376 -  -2.8   -3.4072   GACCGTGGAGCACAA               TGGC TATCCCT GCCA               GTATTTGCCACACAG  48 71
LOY45_RS10175 2187536 .. 2187550 -  -4.2  -3.16564   CCGCTACGCGACGAA               GGCGAA GCC TTTGCC               GAGCGCTTGCAGCGG  45 440
LOY45_RS10160 2184697 .. 2184754 -   -10  -3.05596   GACGCGTGCACGCAA CGCTCCGTACACGCATCCGGACAGGCGTA ACG CACGCCTGTCCGAA-GC-TGT-CGGCAAG GCTCAGGCACGCTCG  66 28
LOY45_RS10155 NONE
        nudE 2182575 .. 2182585 -  -8.2  -2.73364   TGCCGAGCTCAAGTA                 CGGC ATT GCCG                 CGCGGGACTTGCTGG  53 286
LOY45_RS10125 2178140 .. 2178163 - -14.6  -3.05816   GTAGGGCTCAGGCAA          GGCC-CACCCC ACC GGGGTGTGGCC          TTGCGGGAGGCAGCG  81 42
LOY45_RS10025 NONE
LOY45_RS10020 NONE
LOY45_RS10015 NONE
LOY45_RS10010 2154103 .. 2154118 -    -6  -2.66316   CGTCCGATGAGACTA              GCGGGC ACAG GCCCTC               ACCCGGGGAACTTCA  48 24
LOY45_RS10005 2153241 .. 2153265 -  -8.4  -3.11687   TGAATGAGCAGGGAA          GGGGCCGGGC GGGGT GCCCGGCACA          CGGGGTCAGGCGCTA  60 31
LOY45_RS10000 2151437 .. 2151455 -    -8  -3.09834   TATGGCATCAGCGAA             GCGGGCGG GCG CCAGCCGC             CTTCGCATCGTGGCT  55 203
LOY45_RS09985 NONE
LOY45_RS09980 2145597 .. 2145633 - -17.9  -3.86897   GCTATCGCTGAGAAA    GACCAACGCCCCGACCG GAT CGGGCGGGGCGTTGGGT    TTTGCTGCGCGGGGG 100 42
LOY45_RS09955 2140623 .. 2140674 -  -6.7  -3.19522   TGAGTCAACATCGAA TACCT-CCTCGA-GTTCTGCCGG GATTGGCA CCGGCTGAACGTCACGGTAGGTA ATGGGGGGCGGTGGC  54 183
        cysD NONE
        cysN NONE
LOY45_RS09940 2136451 .. 2136462 -  -7.2  -2.73243   ATTGATCGTTCAAAG                GCGC AATT GCGC                 AGGGGGATGCTAGCG  54 80
LOY45_RS09935 2136073 .. 2136098 -  -2.5  -3.08679   TGCTCGCACGCAAGA         TCGTTATCAGC TTGC GCTAATCGCGA          AACTTCACCACCTGG  42 16
LOY45_RS09920 2133888 .. 2133901 -  -2.4  -3.04792   GCAGCATGTTCAATA               CATG AATACG CATG                GTGTTCCTTCTAGTC  41 58
LOY45_RS09915 2132539 .. 2132551 -  -7.7  -2.57132   TCGCGCCGCCAGAAT                CACCA TCG TGGTG                GTTGTGGTGATCGAA  50 397
LOY45_RS09900 2131154 .. 2131172 - -11.7  -2.96873   ATCGTTAGTAAAGTA             GCCCAGC CCCGC GCTGGGC             TTTTTTGCATTTGGC  70 149
LOY45_RS09860 2124929 .. 2124944 -  -4.6  -2.65521   CGCAGACGAACGAAC              CTAGCC GGCG GGCTTG               TGCTCTGCAGTCCCT  43 10
LOY45_RS09855 2124244 .. 2124274 -   -14  -2.65139   AGTAGTGAACAATAG       GCGAGGGGCATC GAGTAAA GCTGCCCCTCGC       TCCATTCCTTTTAAA  78 147
LOY45_RS09845 NONE
LOY45_RS09840 2122571 .. 2122584 -  -2.4  -4.65895   TGGGGCATGGAAAAA               TGTC GGCGCT GACA                AAACTTCGGCTACTT  65 311
LOY45_RS09835 2121136 .. 2121153 -  -4.8  -3.60805   AGATTTGACCGGAAA             CCGTCC TTGATC GAACGG              ATTCTTTTGGCCGGA  54 356
LOY45_RS09820 2119641 .. 2119656 - -10.4  -3.82031   TGAATCAGTACGAAA              GGGACG TCTG CGTCCC               TTGGTTTCAAAAGGG  77 32
LOY45_RS09810 2118389 .. 2118413 -  -4.9  -3.53224   CAGGGCGCCGCGAAA          GTCAGGCGCTC CTT GAATGCCTCAC          AGGTAATTCACGATA  52 22
LOY45_RS09805 2117317 .. 2117341 -  -7.8  -3.56092   TGATCAGCTGCGAAA          GATGCAGCCG CTGGC CGGCGACATC          CAGATTAGTGAAGGT  63 431
LOY45_RS09795 2116261 .. 2116273 -  -5.5  -3.27475   GTTTGGACGAGAAGA                TCGCC GCC GGCAA                GCTGTTGATGAAGCA  51 194
LOY45_RS09720 NONE
LOY45_RS09715 2102406 .. 2102429 -    -6  -3.33162   GACGTTATGGTAGAA          GCTGCAAAGG ATTA CTTTTACAGC           CTCTACGATCCTTCT  54 75
LOY45_RS09680 2096726 .. 2096738 -  -4.8   -3.7732   CCGCTATATGAAGAA                GGCA TGGAC TGCC                GCTCCAGTGAATCTA  58 165
LOY45_RS09670 NONE
LOY45_RS09665 NONE
LOY45_RS09660 NONE
LOY45_RS09655 2095121 .. 2095140 -  -2.8  -2.70932   GCGTCTGGGCAACCA            GCATTCGGT TAC ACCGC-TGC            GGGCTTGCTCATTCC  40 109
LOY45_RS09645 NONE
LOY45_RS09640 NONE
LOY45_RS09635 2093034 .. 2093051 - -11.3  -3.57144   TCCGCCATCTTCAAA             GCCCTGA TTAT TCAGGGC              TTTTTGCGTTTCTGG  77 120
LOY45_RS09625 2092099 .. 2092114 - -11.8  -5.28176   CCCACCCACAAAAAA              GCCCGC CGAA GCGGGC               TTTCTCTCAACGCAT 100 56
LOY45_RS09620 2090486 .. 2090508 -   -17  -5.05505   ATGATAAAGCAAAAA           GCCCGCAGCA ACA TGCCGCGGGC           TCTTCAGGGCTTACC 100 88
        tusD NONE
        tusC NONE
        tusB NONE
LOY45_RS09600 NONE
LOY45_RS09595 2088002 .. 2088020 -  -3.1  -3.35679   CGTTCTGAGTTAGAA             CCCAG TGTACGGAG CTGGG             TTCGAACGAATAGCG  46 74
LOY45_RS09590 2086927 .. 2086964 - -18.5  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGCACTGT ATGC ACTGCACCTGTGGGAGC    TGGCTTGCCAGCGAT  91 60
         aat 2078349 .. 2078359 -  -4.6  -3.21099   CTCTGTCATGATCAA                 CCCC TCG GGAG                 GTGCTTTTGTTTTAA  47 66
LOY45_RS09550 2077558 .. 2077585 -  -7.6  -3.05384   TCGGTGTCCAGTTAA        TGGCCCGGTGCA CAGC TGCGCCAGGCAA         AAAAAGTGGCGTGCA  57 75
        infA 2077269 .. 2077301 -   -20  -3.12351   CTTTTCCAGAGCCAA      CAAAAACGCCCGGC ATTTA GCCGGGCGTTTTCG      TTGGTGTCGCTTAGC 100 36
        cspD 2073959 .. 2073994 -   -22   -3.3344   ATGTAAGCGGCACAA    GAAAACCGGCCAGTCC TTGC GGGCTGGCCGGTTTTC     TTTTGTCTGATCGCC 100 44
LOY45_RS09520 2070002 .. 2070034 - -14.9  -4.09685   CCGTAGTCCGGAAAA      GCGAAAGCCCCGG TGCGTGG CCGGGGCTTTCGA      TGTTACGTCAAGCGA 100 44
LOY45_RS09515 NONE
        mnmA NONE
        hflD 2067570 .. 2067607 - -13.4  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTGCAG TGCATG CCGTCCCTGTGGGAGC    TGGCTTGCCGGCGAT  75 47
        purB 2066029 .. 2066047 - -17.4  -5.06414   TTTCGGTAATAAAAA             CGCCCGGC TGA GCCGGGCG             TTTACGCGCAGGGCG 100 45
LOY45_RS09495 NONE
LOY45_RS09490 2064322 .. 2064342 -  -3.9  -2.82623   CGGCTCCCACAAGGA            TCAGGTTGG CAT CGAACCTGT            GGGAGTCGGCCTTGC  43 74
LOY45_RS09485 2063301 .. 2063314 -  -8.1  -3.53224   GAGCGCGGCTCGAAA               GCCCT TGCC AGGGC                CTCTGATCAGCGGGA  64 177
        aceA 2061582 .. 2061617 - -17.7  -5.61596   ATCCTGATAAAAAAA    CAAAACCCGGGACCC CATCAC AGGCCCCGGGTTTTG     CGTGTTACCCGAATG 100 59
LOY45_RS09475 2060534 .. 2060546 -  -2.7  -3.82084   TCGTAAGATTAAGAA                CAAAA ATC TTTCG                TAACAGGCTGCAGGC  53 220
LOY45_RS09470 NONE
LOY45_RS09465 2059238 .. 2059252 -  -5.6  -3.50734   AACGTAGAGAATGAA               GCCAGG CTG CCTGTC               GCACATGCGCAGGCA  54 54
        nuoC NONE
        nuoE NONE
        nuoF 2055518 .. 2055539 - -15.1  -3.09834   GAGCTGAGCAGGCAA           GCGGGCGGC ACGG ACCGCCCGC            GTTGTTATTCGTTAT  83 37
        nuoG NONE
        nuoH 2051678 .. 2051694 -  -3.7  -3.07013   GATGTCGCCAATATA              TTTGAAC ATG GGTCAAA              TCCTCACTGGGCCGC  46 29
        nuoI NONE
        nuoJ NONE
        nuoK 2050307 .. 2050319 -  -2.7  -3.19157   TACGAACGTCAGGAA                GATAA GGT TCATC                CGCGCATCTCACTGG  43 21
        nuoL NONE
        nuoM NONE
        nuoN 2045377 .. 2045396 -   -15  -5.09259   CAGCCCAAAACAAAA            CACCCCGC CGAA GCGGGGTG             TTTGTCATAGCCAGA 100 45
LOY45_RS09405 2042646 .. 2042658 -  -4.7  -3.01791   AGCTGGTGCGCAAGA                TCCGC ACG GCGGT                GCCGCTGGCCGAGCA  46 518
        yegQ 2040516 .. 2040535 -  -3.4  -2.78463   ATGCCGGTGACCAGA            CCCGGGCG TTCT CGGCCAAG             CAGTGGCAGGTGATT  40 138
LOY45_RS09385 2037410 .. 2037425 -  -3.2  -3.28712   GTGCTGTCGGCAGAA              GCGG GAAATTGT CCGC               TGTCCGGTGGGGGAC  46 326
LOY45_RS09375 2036877 .. 2036902 -  -9.7  -2.52464   TGGTTGGCCAACCCA         TGCTCACTCGC AAGG GCGAGCCAGCA          GCAGGCTGACCTGGC  62 3
LOY45_RS09370 NONE
LOY45_RS09365 2035480 .. 2035522 -  -3.2  -2.72511   TGCACTCCTGGAAAT CTTCAGCTCAAGCCCCCTCC AGC AGAGAGGGCCATTGGCGAAG GGTTACGCTGAGGTA  40 63
LOY45_RS09360 2034707 .. 2034725 -  -5.2  -3.39784   GCAGTGGCAACAACA             CCGCCG TGGTCGC CAGCGG             CAACCTGACCGAGCG  51 195
        xthA 2027579 .. 2027590 -  -5.8  -3.02263   AGAGGTGGCGCAACA                TGCC GTCT GGCA                 CTCATGGGCAAAGGG  51 213
LOY45_RS09335 2026192 .. 2026203 -  -2.2  -2.72096   GTCACTAAGGACAAG                CCTA GCCC CAGG                 GAGGGTGAGCGCCCA  38 85
LOY45_RS09330 2024689 .. 2024702 -  -4.5  -3.57462   GAGCTGATGTGCAAA               CGCTC GGTG GAACG                TACCGCCTTCGGTCG  53 398
LOY45_RS09320 2022499 .. 2022516 -  -3.4  -3.79113   AGCGCCTTACAACAA             CGATAG TGGTAG CCATCG              AGGGCACCGCCAGAT  54 284
LOY45_RS09310 NONE
LOY45_RS09305 2020149 .. 2020166 -  -3.3  -3.01712   GCGGGTGCGGTAACA             CCCAGGC CCTG ACCTGGC              TGTTACCGCCTGTGT  42 41
LOY45_RS09295 2018745 .. 2018759 - -11.4  -2.62616   GTAGGCCTTAGATTA               CCGAGC CTG GCTCGG               ATGCCTTGAGATGCC  67 3
        ccoG NONE
        mapR 2015705 .. 2015738 -  -8.8  -3.53811   TCCATCCCTGGGAAA     TTCGAGCGCGCAGG GTGCAG CAAGCGCACTCGAA      GTTCAACCGCCGCTC  66 39
LOY45_RS09280 2013727 .. 2013740 -  -3.8  -3.69395   CGCAGCACTCAACAA               CTGC GCGGCT GCAG                GTCGGGCGGATCAAT  52 36
LOY45_RS09275 2011157 .. 2011169 -  -7.7  -3.18681   GCTCAAGCTGATGAA                GACCA ACG TGGTC                GGGCCGATGTTGTGC  57 431
LOY45_RS09260 NONE
LOY45_RS09255 2006824 .. 2006841 -  -4.7  -3.87815   CTCCACTTCTAGAAA             CGCAGGC GCAC ACCGGCG              ACCAGGCGGGTCTGG  59 1
LOY45_RS09250 2006376 .. 2006390 -  -2.1  -2.63102   ATCACGGTCAGATCA               GTAGT TGGCG ACCAC               TTCGTCCTTGCCCTC  38 8
LOY45_RS09245 2005866 .. 2005877 -  -7.2  -3.21099   TTCTGTGAGGATGAA                GCGC ACCT GCGC                 GCCCAGGACTTTGCC  54 76
LOY45_RS09210 1998996 .. 1999041 -  -5.3  -3.76169   GGAAGAGGAAGACAA GGACGGCGACTGGATCAAGCGC GAT GCCCGTTATGC-GTCGCTGTCC AAGTCCACTGCCTTC  58 339
LOY45_RS09190 1994246 .. 1994258 -  -4.7  -3.05384   TTGCCGGTGATCGAA                GGCCG TGC CGGGC                GTATCGGCGCTGCGG  47 484
LOY45_RS09180 1992590 .. 1992605 -  -4.6  -3.99592   ATCGAGGACGAGAAA              GCACGA CTGT TCGAGC               TCTGGCAGACCAACC  62 208
LOY45_RS09170 1991745 .. 1991761 -  -6.5  -3.44553   CGAAAAACCCTACAA              CGATCAG TTA CTGCTCG              ATAGCGTTCAGGACG  57 343
LOY45_RS09155 1987801 .. 1987820 -  -2.8  -3.10597   TCTCGCAGTCAAAAG            GGGTCAGAG CGC CT-TGGCCC            AGTCGCGCAGCAGGT  43 9
LOY45_RS09150 1985975 .. 1986004 - -15.7  -2.68279   CACGGACGAAAGGTA       GGCCTGCGCCACC GGGC AGCAGCGCAGGCC        GTTCTTCAGAACTGC  82 31
LOY45_RS09145 1984459 .. 1984479 -  -2.5  -2.92858   TCAATCACAGTAAAG            GCATCGG TGCACTG CTGATGC            TGCTGGTGGGGCTGC  41 360
LOY45_RS09135 NONE
LOY45_RS09130 NONE
LOY45_RS09125 1978977 .. 1979033 -  -6.5  -2.91681   GCGCAAGGTCAGATA GCATCGCGGGGCAAGCCCGCTCCCACA GACTT TGTGGGAGCGG-CG-GTGCGGCGATCC GACTTGACCCGCGAT  53 55
LOY45_RS09100 1975100 .. 1975129 -  -2.2  -3.76224   TCTTGACTCAGTAAA       CCAATGCTGGC GGCCAGTTT ACCAGCAT-GG       TCACTTCAGTGGTTG  51 26
        queD 1974685 .. 1974700 - -10.4  -5.78622   CCAGGCCAAAAAAAA              CCACCC CGCA GGGTGG               TCTCTTCACATCCAT 100 49
        rhtA 1967889 .. 1967904 -  -4.6  -3.39844   GTTACAGCTTAAAGA              TGGCGG ATGC CCGGCA               CAATGACCAGTGTCT  52 65
LOY45_RS09060 1967442 .. 1967461 - -10.6   -5.2112   AACAGCAGCAAAAAA            GGGCGGCC GTTG GGTCGCCC             TTTTTGGTGGGATGC 100 42
LOY45_RS09045 NONE
LOY45_RS09040 1961941 .. 1961969 -  -6.6  -3.44051   GGCCGAGCAGCACAA        TGGTCTGGTCGC AGCCA GCATCCAGGCCA        GCGACGATGGCAGTC  57 232
        soxR 1960974 .. 1960991 -  -5.5  -3.06183   CGCAGGTCGAGCGAA             TCAGCGC TGCC GCCCTGA              TCAATTCCACCGGTA  49 297
LOY45_RS09015 1957989 .. 1958007 -  -3.7  -4.59773   GTCGAGGGGCAAAAA             CACCTGC TCAAT GCCGGCG             AGTTCTTCTCCTTTG  75 136
LOY45_RS09005 1956488 .. 1956499 -  -7.2  -3.05769   TTTTCAAAGGATAGA                CGGC ATTT GCCG                 ATCAGAGGCCCGCTT  57 27
LOY45_RS09000 NONE
LOY45_RS08995 NONE
LOY45_RS08990 NONE
LOY45_RS08985 NONE
LOY45_RS08980 NONE
LOY45_RS08975 1949986 .. 1950004 -  -5.3  -2.84325   TGCCGCGAAAGAGCA            GCTGCAGG AAGG CCTG-AGC             AAGACTCTCAAAGCC  45 309
LOY45_RS08960 1948840 .. 1948851 -  -4.4   -4.1552   TAGGTTGCTAATAAA                TTCC GGAG GGAA                 TGATGAATAGCCAAG  61 257
LOY45_RS08920 1936894 .. 1936917 - -18.2  -2.64472   GATCGTTGAAATGGA          TCGGGCGCTG CTGC CAGCGCCCGA           TTTTCTCCCGTCACT  86 36
LOY45_RS08875 NONE
LOY45_RS08870 1922466 .. 1922513 - -40.2  -3.08312   AAGTGAGGCAGCTAA TCGCGGGGCAAGCCCGCTCCTA CCTG TAGGAGCGGGCTTGCCCCGCGA TGGTGGGGTTACACC 100 34
LOY45_RS08860 NONE
        gloB 1916143 .. 1916167 -  -2.7  -2.79796   GGCTATTGGACGACA          TTGGCTGGGAC GAA GTTCCGGGCAA          AAATGTCGGGCGATT  41 101
LOY45_RS08830 1914670 .. 1914697 -    -4  -3.92746   TCGACTGGAAAAAGA        GTGCCGCGTG GGGCGGGG CAGGCGGCTC         CGGTCACTGACCGGA  58 50
LOY45_RS08825 NONE
LOY45_RS08820 NONE
LOY45_RS08815 NONE
LOY45_RS08810 NONE
LOY45_RS08805 1907101 .. 1907116 - -11.8  -4.78848   GCTTGAAACAGAAAA              GGCCGC TGAT GCGGCC               TTTTTTGTTTTCAGG 100 120
LOY45_RS08765 1897223 .. 1897237 -  -8.5  -4.58283   GAACGCCTCGAAAAA               GCCGC CTTGT GCGGC               TTTTTTCGTTTCTGG  82 146
        folD 1895365 .. 1895384 - -10.7  -5.96219   CAGGCACAAAAAAAA            CGGCACC TTCACC GGTGCCG             TTTCTTATCCCGCCA 100 48
LOY45_RS08700 1887040 .. 1887063 - -10.2  -3.05596   GAGGGCCCCAGCCAA          CACGCGCCAG GCAG CCGGCTCGTG           CCCGCCCTCCGCAGG  68 269
LOY45_RS08695 NONE
LOY45_RS08690 1885599 .. 1885632 - -13.2  -4.08144   GTGATCAATGATAAA     TCCCGGCTGAAGCGC GTTGG GCGCT-CAGCCGGTA     AAGCTGAAATAGTGG  91 69
LOY45_RS08685 NONE
LOY45_RS08680 NONE
LOY45_RS08675 1882485 .. 1882525 - -11.9  -3.61356   AGGACGCAGGGCAAA  TGCGGCCGTGATCAGCTCA GGG CGAACCGATCACGACGACA  CGGCTTACTCGTTGT  79 30
LOY45_RS08670 NONE
LOY45_RS08665 NONE
LOY45_RS08660 NONE
LOY45_RS08655 1879402 .. 1879412 -  -2.4  -3.04144   CTGGCAGGGCGAATA                 CGGC ATG GCGG                 TGTTCCTCGGCCTCT  41 270
LOY45_RS08605 NONE
LOY45_RS08600 NONE
LOY45_RS08595 1868001 .. 1868014 -  -3.1  -3.91716   GCACGGGGCAAAGAA               GTACA CTTG TGCAC                TGAAATTTTATTTTC  56 84
        fabA NONE
        fabB 1866078 .. 1866097 -   -15  -5.38054   TGGCACAAACAAAAA            CGCCCCGA CGAG TCGGGGCG             TTCGAGCATAAGGGG 100 48
LOY45_RS08565 1861554 .. 1861568 -  -3.5  -3.36273   CCCCGGCAAGATGAA               GTACG ACGCA CGCAC               GTCCAAGCGCGCGTT  47 186
LOY45_RS08540 1857440 .. 1857454 - -11.4  -5.64274   GCAGCCATAAAAAAA               CCCGAC AGT GTCGGG               TTTTTTTTATTCCGG 100 50
        gltA 1841766 .. 1841783 - -12.7   -5.4505   GCGCGCAATAAAAAA             GGCTGCC CGAA GGCAGCC              TTTTTTCGTTTTCGG 100 50
LOY45_RS08430 1831759 .. 1831785 - -15.8  -4.18018   TGCGGCCATTGAAAA         GCCCCCTGGCCA CTA CGGCGAGGGGGC         TTTTTTATTTACCGG 100 46
LOY45_RS08410 1827757 .. 1827778 -  -5.1  -2.73364   CGCGCAGTTCAATCA           GGGGTGTGGA CAT TCAAC-CCCC           GCTCGCGGCAGGTGC  47 17
LOY45_RS08405 NONE
LOY45_RS08400 1824109 .. 1824126 -  -3.4  -3.79113   AGCGCCTTACAACAA             CGATAG TGGTAG CCATCG              AGGGCACCGCCAGAT  54 297
LOY45_RS08385 1820395 .. 1820415 - -13.9  -4.19817   CCCAGGCATGTAAAA            GCCCGGGGC AGT GCACCGGGC            TTTTTTATGGCCCTC  95 39
        dsbD NONE
LOY45_RS08360 NONE
        dsbG NONE
LOY45_RS08350 1812441 .. 1812456 - -10.4  -2.78384   TCGGCGCCCAGCACA              GCCAGG CCTA CCTGGC               GCCGCGCAGCGAGCT  59 325
LOY45_RS08340 1798465 .. 1798486 -    -3  -3.66018   CGAGTACCTGAACAA           GCT-TGAGG CCGAT CCCCACAGC           CTGACCCTGATCGGC  51 461
LOY45_RS08325 1796227 .. 1796239 -  -3.3  -2.83903   GGGGCTAAAAAGGCA                GGCCA GTA TGCCC                AAGGCCCGGAGCGCC  41 52
LOY45_RS08320 1795836 .. 1795872 -  -7.9  -2.52543   ATCGCTGGCAAGCCA    GCTCCCACAAGTTGTTC ACC GCAATCCTTGTGGGAGC    TGGCTTGCCAGCGAT  53 63
        ccoN NONE
        ccoO NONE
LOY45_RS08300 NONE
        ccoP 1791815 .. 1791841 - -23.8  -3.17571   AAGGGGCGAAGGGAA         CCGCCGCATCGG GTG CCGATGCGGCGG         TTTGAGTCAAGGCTC 100 56
        ccoN NONE
        ccoO NONE
LOY45_RS08280 NONE
        ccoP 1788111 .. 1788135 - -21.5  -5.24129   GGGGTCTATAAAAAA          GCCCCGGCAGT TTT ACTGCCGGGGC          TTTTGCCAGCTGGGC 100 44
        ccoG NONE
LOY45_RS08265 1785878 .. 1785909 - -13.1  -2.52543   ATCGCTGGCAAGCCA      GCTCCCACAGG GATAGTGCAA CCTGTGGGAGC       TGGCTTGCCAGCGAT  72 50
LOY45_RS08260 NONE
        ccoS NONE
LOY45_RS08250 1782451 .. 1782474 -  -3.8  -2.71924   GAGCGCGGGGCAAAC          CCGTGTTGAT TTGT ATCAACGCCG           CTTCAGTGGCCCATC  42 28
        hemN 1780910 .. 1780948 -  -2.4  -2.91582   GATGCCATCTATAGA  CGGTGAGGCT-TACAGC CTGTGC GCTGTAGAGCCTCTGAG   CGCTGCTTGGCCCCG  41 88
        fnrA NONE
LOY45_RS08235 1779464 .. 1779476 -  -9.1  -3.14602   GCGATGCTATCAATA                CTCGC TCA GCGAG                AACTCGGTCAGGCAA  63 7
LOY45_RS08225 NONE
LOY45_RS08220 1777023 .. 1777040 -  -3.3   -4.2828   GGGCACGCACGAAAA             CTTCGAG AACG CCCGGAG              TGTCGAGGAGGGAGA  61 46
LOY45_RS08215 NONE
LOY45_RS08210 1773190 .. 1773203 -  -4.5  -4.08216   GGATGTGGGCGAAAA               GTCAG GCCC CCGAC                GTCTGATCAGCTGAT  61 215
LOY45_RS08205 1772002 .. 1772019 - -12.7  -3.86981   TACGAGAATCAACAA             GCCAGGC CAAT GCCTGGC              TTTTTTTTTGTGTGT  89 49
LOY45_RS08190 1767338 .. 1767352 -  -7.1  -5.45652   ATGGGCAATAAAAAA               CCGAC TTAAG GTCGG               CATCGGGCTAGTCAT  91 469
LOY45_RS08185 NONE
LOY45_RS08180 1765366 .. 1765383 -  -4.1  -5.40072   GTTGGTGCAAAAAAA             CGAATGC AGAC GTATTCG              GTAGTTTCTCGTCAA  86 274
LOY45_RS08165 1763894 .. 1763904 -  -3.2  -3.62224   ACACTGGGGCAAGAA                 TCGC TTG GCAA                 CTGCTGGTGTACCCT  50 115
LOY45_RS08160 1762652 .. 1762665 -  -2.3  -4.57569   TGAGTTGGGTAAAAA               CTGCC CGCC GCCAG                AATTTCCGATACAAT  65 205
        xdhA NONE
        xdhB 1742194 .. 1742231 - -16.3  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTCCGGT GTAC ACAGATCCTGTGGGAGC    TGGCTTGCCAGCGAT  85 48
        xdhC NONE
        guaD 1739708 .. 1739755 -  -4.8  -3.05384   GGCTTTGCCAGTGAA GT-GGTGATGACCGCGATGTTCA TCC TGATCATCATGGGCGCCACCGAC AGCCGTGCCCCGGCA  47 253
LOY45_RS08075 1736631 .. 1736650 - -11.4  -5.19328   AGCCGACAACAAAAA            GCCCCACC CGAA GGTGAGGC             TCTGTTTACCTGCAG 100 47
        puuE NONE
        uraD NONE
LOY45_RS08055 1733535 .. 1733546 -  -4.4  -3.08992   AGCCATTCCAACAGA                TGTG CTTC CACA                 GTCTTTACCTCTACC  47 75
LOY45_RS08050 NONE
LOY45_RS08045 NONE
LOY45_RS08040 1729696 .. 1729713 - -11.3  -2.67803   CGGTCAGCAAACGCA             GGCAGGA TCCG TCCTGCC              CTGATCGAGGGGGCG  67 123
LOY45_RS08035 1728636 .. 1728646 -  -8.2  -3.72576   TTGCCGGCGATCAAA                 GCCC GAA GGGC                 TTTGCCTCTTTGATC  69 39
LOY45_RS08025 1726831 .. 1726864 -  -3.7  -3.61178   GCGATCGAGCGCAAA     GCGCTCGCTGGCC TCATCGCT GGCAAGCCAGCTC      CCACAGGGATCTCGG  52 50
         gcl 1724270 .. 1724299 -  -4.2  -4.56597   GTCTCCTTGCAAAAA       GGGGCCCTG-TGC ACCCG GCAGCAGGGCCTT       CGCAGCGATCAGTCG  71 34
         hyi 1723341 .. 1723389 -  -2.7  -3.13164   CTTGTAATTATTCAA TCTCGGCTGGCGGGCCGGGCCCC TGT GGGAGCTGGCTTGCCAGCGATGG GAACAATGCGGTGTA  43 104
LOY45_RS08005 1722286 .. 1722325 - -22.9   -4.8622   CTTCGGAATCAAAAA  CGCCCCTGGGCCCGCCT CCGTGC AGGCTGACCCAGGGGCG   CTGAAAGCGGCAAGC 100 121
LOY45_RS08000 NONE
         pyk 1719500 .. 1719537 - -18.5  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTTCGGT GTGC ACAGCACCTGTGGGAGC    TGGCTTGCCAGCGAT  91 51
LOY45_RS07990 NONE
LOY45_RS07985 1717584 .. 1717594 -  -6.8  -3.53444   CGAGTTGGCGTTAAA                 GGCA TTA TGCC                 AGCGACTATAGCGGT  58 81
LOY45_RS07980 1716491 .. 1716543 - -35.9  -3.34013   TATTGCGCGAAGCAA TCGCCGGGCAAACCCGCTCCTAC ACATTCA GTAGGAGCGGGCTTGCCCGGCGA TGAGGCCCTTACTGC 100 34
LOY45_RS07975 1715928 .. 1715963 -  -6.8  -2.64472   CACTCTGGAAATTGA    GCCAGCGGCCGCCTG CACCTGT CAGGCAGGCGC-AGC    AAAAACGGCCGGTTC  50 68
LOY45_RS07970 1713744 .. 1713755 -  -3.6  -3.28712   GGTGGCGTCCTAGAA                GCGC GTCT GCAC                 GGCCAGCTCCAGGGT  48 8
LOY45_RS07965 1711990 .. 1712008 -  -4.4  -3.07222   AGGATTACCGCAAGA             TCCTGCGG CGC CTGCCGGA             GCTGTTGAACGACGG  45 281
LOY45_RS07955 NONE
LOY45_RS07950 1709298 .. 1709314 -  -5.1  -3.66844   TTCATAGCGGAACAA              GTCCCTT TCA AAGGCAC              GCAAGGCGCAGGTCG  56 44
LOY45_RS07945 1706172 .. 1706203 -   -10   -3.6502   GATGGCGGAGGGAAA      CAGGCGGGCAGGGC GCAG GCCGTGCCCGGTTG       AAGTCAGGCCAGGGC  72 29
LOY45_RS07940 1704686 .. 1704696 -  -8.2   -2.9834   AGCAGCACAAGGACA                 GCGC GCA GCGC                 CTGGTCAGCTGAACC  58 55
LOY45_RS07930 NONE
LOY45_RS07925 1701142 .. 1701156 -  -2.8  -2.75528   ACCCGCAACACATCA               GGGT TCACTCC ACCC               AGTCAGGCCGGGTGC  41 15
        asnB NONE
LOY45_RS07915 NONE
LOY45_RS07910 NONE
LOY45_RS07905 1696394 .. 1696429 - -20.5  -3.75153   GGCCCCCAACGCAAA    CAGCCCGGTGGCGCA GGCGAG TGCGCTACCGGGCTG     TTTGCCGGGGCTGCG 100 51
LOY45_RS07900 NONE
LOY45_RS07895 NONE
LOY45_RS07890 1693601 .. 1693615 -  -4.9  -3.21099   GGCGTTGATCATCAA               GCGCC TGAGC GGCAC               CCCGCCGCACCTGAT  49 382
LOY45_RS07880 1692315 .. 1692333 - -12.4  -3.19668   GACCAGTGAACTGAA             GGGCCTGA TTG CCAGGCCC             TCGAGTGAGCCGGTG  74 203
LOY45_RS07865 1689086 .. 1689100 -  -5.6   -3.4072   GATGCGCCATCAGAA               GCACTC TCG GGGTGC               TTCTTTGCTGGTGCA  54 76
LOY45_RS07850 NONE
LOY45_RS07845 1684598 .. 1684645 -  -9.8  -4.11216   GCGCCACGCCGAAAA GCCCGGCGAAGGCCTTGGGCAAC TCA ATTG-CCAGGGACTCAACCGGGC GCTGGACCTGGCCAC  76 489
LOY45_RS07825 1681411 .. 1681427 -  -4.4  -4.56775   ATGTCCCTGGAAAAA             CAC-GGC AGCT GCCTGTG              CGGTGCCGTCAAACT  71 394
LOY45_RS07760 NONE
LOY45_RS07755 1670930 .. 1670944 -  -8.5  -3.48395   AGTCTTCCCATACAA               GCGGG CTTGC CCCGC               GATGCTTTCAGGTAC  64 33
LOY45_RS07450 1603420 .. 1603449 - -10.8  -3.18912   TCATGCATGCAGCAA      GGCCGGCATCGCCA TCAG TGG-G-TGCCGGCC       TTGTTTGTGTCTGCA  68 43
        flgA NONE
        flgM 1600267 .. 1600283 -  -3.5  -2.52543   AGCGTCCTGAAGTCA              GCGCGCC GGG GGCTAGC              GCTGGGCTTCGAAAT  41 21
LOY45_RS07425 1599770 .. 1599783 -  -3.1  -3.37053   ATACAGGGGAATCAA               GC-CTG GCT CAGCGC               CCGTGGCTTGGCGAG  46 8
LOY45_RS07420 1598548 .. 1598560 -  -5.5  -3.21099   CGGGGTGATGATGAA                GCTGC TGG GCAAC                CAGATGCTCTATGCC  51 406
LOY45_RS07400 NONE
LOY45_RS07395 NONE
LOY45_RS07390 NONE
        lpdA 1590181 .. 1590207 - -13.7   -4.8622   TCGGTGAATGAAAAA         GGACCCGCTGC ACGGA GCAGCGGGTCA         AATCGGCCTCAGCCG 100 50
LOY45_RS07375 1588227 .. 1588242 -  -5.4  -3.02144   CCACGCTGCGGAAGA              CCTGGCC AGC GGC-AGG              CTGCAACTGGCCCTC  46 112
LOY45_RS07365 NONE
LOY45_RS07360 1585233 .. 1585257 -    -5  -3.42352   AAGGAATAAATAAAG         CCCCTTTCAGA ATCA TCTGGA-GGGG          TTTTTTTCATTAAGG  54 467
LOY45_RS07345 1584427 .. 1584446 -  -6.4  -3.60971   ATCGTAACCGGGAAA            CCGCTCAA GACA TCGAGCAG             CGTCTGGCGCGGGCA  59 164
LOY45_RS07330 1583272 .. 1583293 - -14.5   -5.4833   CGAGGTAATAAAAAA           GGCCAATGC GTGA GCATTGGCC            TTGAGTGATTGTGCC 100 47
LOY45_RS07310 1579236 .. 1579256 -  -5.3  -2.69202   CAAATCAGCAGAGGA            TCGCGACGC CTT GCACCGTGA            AGCCGGCCTGGTCAA  44 68
LOY45_RS07300 1576257 .. 1576269 -  -6.9  -2.57683   AGACCGGCTCAGAAC                GCGCC CTT GACGC                CGACGCCAACCATGC  50 6
LOY45_RS07295 1574873 .. 1574890 - -11.3    -5.626   CATCGGACAAAAAAA             CACCCCT CGCG AGGGGTG              TTTTTTTTTGCCTGG 100 44
LOY45_RS07250 1566438 .. 1566450 -  -4.8  -3.51232   GCTGCTGCAAAGCAA                GGTG TCGAT CACC                TTCACCGCCTACACC  53 522
LOY45_RS07180 1551387 .. 1551420 -  -3.1  -3.88232   TTTCCCATACAACAA     TTGCCAACAAGTTGC GTGA ACATGGTGTTGGCAA      GTCGGATTAATTAAT  56 161
        phhA NONE
LOY45_RS07165 NONE
LOY45_RS07160 1547011 .. 1547028 -  -3.3  -3.54459   GCAAGTGTGTGGAAA             GGCTGCGC AAG GCGC-GCA             TGGGCTTGTGAAAGC  50 210
LOY45_RS07155 NONE
LOY45_RS07150 1545518 .. 1545542 -  -8.4  -3.40907   GGACACCAAGAGCAA          GCGCGGGGCC ATCAA GGCCGGGCGC          GGCAAGATCGATTAT  64 37
LOY45_RS07135 1543457 .. 1543467 -  -2.4  -2.70932   GCGGTCGGTGAAGGA                 CCGC TAC GCGT                 TTGCGTTCTGTGACC  38 43
LOY45_RS07130 1542611 .. 1542654 -  -5.9  -3.04144   CCCGTATCGCGAATA CGGTCATCCCCCCCCAGGTA ACGGG CAGCAGGGAGGGGATGGC-G TTCGGTGGGCTCTTG  51 56
LOY45_RS07125 1541934 .. 1541949 -  -2.5  -3.02947   GAGCGACTAGAGATA              GACCA GCTCAA CGGTC               GTACTGCCGTCCAGC  41 1
LOY45_RS07120 NONE
LOY45_RS07115 1538563 .. 1538577 -  -4.2  -2.70932   CGGTGTGTGGAAGGA               CGACAC AAC GTGTGG               CTGCCGTCTGGCGTC  43 60
LOY45_RS07110 1537371 .. 1537389 - -17.4  -5.40072   CCCGGTTGAAAAAAA             CGCCCCGC TCT GCGGGGCG             TTTTTGTTTACAGGT 100 33
LOY45_RS07075 NONE
LOY45_RS07070 1529888 .. 1529915 - -19.2  -3.65828   AGAGAAAGCTGCAAA        GGGCGGTGCGCCG GCT CGGC-CACCGCCC        TTGGGCATTACGGCA 100 33
LOY45_RS07065 NONE
LOY45_RS07060 1528691 .. 1528711 -  -8.9  -3.34894   AAGCTTGGGTAAAGA            TGCCGGCGC GCC GCGCTGACA            TTACAGGCTGTAGTA  65 26
LOY45_RS07055 1528136 .. 1528161 - -21.9  -4.74103   CCTCTAACGGAAAAA         GCCCGGCCTGC TGGG GCAGGCCGGGC          GGGTGGCTGACAGCT 100 40
LOY45_RS07050 1526270 .. 1526293 -  -8.2  -3.14564   CGAGGCGCGGACGAA          GCTT-GGCGAA CTG CTCGCCGAAGC          GGTAAAGCTCAGCGG  57 510
LOY45_RS07040 1524045 .. 1524057 -  -7.7   -2.5294   GACCCCTTACAAGAC                GGCAT TCC ATGCC                CCGCTGGTATTCAGC  50 513
LOY45_RS07030 1523036 .. 1523046 -  -5.4  -3.53012   CCTTGCGGGCCGAAA                 TCAG AAG CTGA                 CCTTGCCGCGCAGCA  54 15
LOY45_RS07025 1521839 .. 1521859 -  -2.6  -3.59979   CGCCGCTATTCCAAA           CTGG-TGCT GGGC AACATCCAG            CTGGTCGACCAGGCC  50 512
LOY45_RS07015 NONE
LOY45_RS07010 1519597 .. 1519622 -  -3.9  -3.17075   CTTCCCGGAAGCCAA         GGT-GCTCAAGC AGC GCGTGCGCGACC         AGATCGACCCGCAGC  45 73
LOY45_RS07000 1516944 .. 1516978 -  -9.3  -3.01712   GGCGGTGCTTGAAGA    CCGCCGGGC-GAAAAA AATT CTTCTCTGCCCGCCGG     CCAAGCCGCTGATCG  59 169
LOY45_RS06985 NONE
LOY45_RS06980 1513187 .. 1513210 - -12.4  -2.52543   ATCGCTGGCAAGCCA          GCTCCCACAG AGAT CTGTGGGGGC           TGTCTCAGGACGGGC  70 30
LOY45_RS06970 NONE
LOY45_RS06965 NONE
LOY45_RS06960 1498645 .. 1498660 -    -4  -3.53811   GGTACCTGGCGTAAA              GCGAGCA AAT TGCT-GC              ATTTGAATCCGTTGC  51 395
        speB 1494365 .. 1494378 -  -2.3  -3.05384   CCCGGCGCCAGGCAA               GCCTG ACGC CAGGT                CATTCGTCTACTCAG  42 105
LOY45_RS06935 1492881 .. 1492922 - -15.1  -4.09739   GCAACGTCGCTAAAA CACATTGGCCGCCGCATCA TTGC TGATGCGACGGCCGTGGTG  CACCTGCCTGTCAGG 100 36
LOY45_RS06910 1490312 .. 1490332 -  -3.2  -4.31835   AAGGCTGACAAGAAA            GGCGACAA GAAGG TCGTTGCC            AAGCGCAAGCCGACC  64 219
LOY45_RS06900 1487518 .. 1487546 - -14.6  -3.62046   GTACTGGTGGAACAA       GGGCGCCTGCCTG GTTT CAGGC-GGCACCC        TGGCGGTGATGAACA  87 142
LOY45_RS06880 1484532 .. 1484542 -  -2.4  -2.71731   TTCATGTTCGAAGTA                 GGCC ATC GGCG                 TGATTCCTGTCAGGC  38 35
LOY45_RS06875 NONE
LOY45_RS06870 NONE
LOY45_RS06865 NONE
LOY45_RS06830 1471917 .. 1471939 -    -9  -3.44146   GTCTTCGACAAGGAA           GGTCGGCCAG AAG CTGGCCGCAC           GGTTCAGTGCAGGGC  66 29
LOY45_RS06825 NONE
LOY45_RS06820 1469036 .. 1469058 -   -12  -3.61398   GCTGGGCCTGAAGAA           GATCGCCTGA GTT TCAGGCGAAC           GCTTCGCGCTCGATC  79 110
LOY45_RS06805 NONE
LOY45_RS06800 1463456 .. 1463482 -  -7.9  -3.17075   GGTGGTCGAACTCAA        CCGCGCCGCTGC CCTG GCC-CGGCGCGA         TGGCGCCCAGGCGGG  55 237
LOY45_RS06750 NONE
LOY45_RS06745 NONE
         ada 1454159 .. 1454175 -  -2.9  -3.32647   CGTCAATTACACCAA              TGCCGAA ATG TCCGCCA              AACTGGGCTCGCCCT  47 388
LOY45_RS06725 1452338 .. 1452368 -  -8.2  -4.13282   ATGACATCCTGAAAA       TGGGCGATGAGC GCTTGCT GCGCATCGCCCC       GCCTGTGCCGAAGCA  72 464
LOY45_RS06705 1449248 .. 1449273 -  -6.1   -4.4009   TGCGATGCCAGAAAA         CACTGA-CCCCG CAA CGGGGCTTAGCG         GTTGGCGCTGGCCGT  72 20
LOY45_RS06695 1448192 .. 1448218 -  -2.9  -4.20918   GGCAACTTCAAGAAA         GCCATCGGTGC CTTGT ACAAGGATGGC         CGCATCGTCATCCAC  64 65
LOY45_RS06685 1446198 .. 1446223 -  -3.2  -3.07043   CCGATTACTGGAAGA        GCCTGCAGGCGG CGAT CCGCG-GC-GGC         AAGGTGATCGATGTG  43 208
LOY45_RS06675 1443259 .. 1443294 -  -8.5  -3.75665   CTATATGGCACGAAA    TTGCA-CAACAACTGC GCGTG GCAATTGCTGGTGCAA    GGAAAAGAGGCTTTT  69 210
LOY45_RS06670 NONE
LOY45_RS06665 NONE
LOY45_RS06660 NONE
LOY45_RS06655 NONE
LOY45_RS06650 NONE
LOY45_RS06645 NONE
LOY45_RS06640 NONE
LOY45_RS06635 NONE
LOY45_RS06630 NONE
LOY45_RS06625 NONE
LOY45_RS06620 NONE
LOY45_RS06615 NONE
LOY45_RS06610 NONE
LOY45_RS06605 NONE
LOY45_RS06600 NONE
LOY45_RS06595 1428859 .. 1428878 -  -2.8  -2.79183   GCCAGGTTCATCACA            GCTGTTTCG CTT CGAT-CAGC            GCCAGTTGTTCCTTG  41 1
LOY45_RS06590 NONE
LOY45_RS06585 1427413 .. 1427431 - -11.7  -5.86061   GCGGAGCAAAAAAAA             CCGGCAC ACCCG GTGCCGG             CCAATTGCGCGTGTT 100 48
LOY45_RS06580 NONE
LOY45_RS06560 1421101 .. 1421131 - -20.6  -2.53263   GCGACTGGGAACGCA       GACGGCCCATTCAG TCT CTGAATGGACCGTC       ACTCGGTGACTCAGT 100 36
LOY45_RS06555 NONE
LOY45_RS06550 1418891 .. 1418924 -  -8.1  -2.52543   ATCGCTGGCAAGCCA     GCTCCCACAGGTG AATGCAAA CCTCTGTGGGAGC      CGGCCTTGCCGGCGA  55 64
LOY45_RS06525 1414136 .. 1414150 -  -7.8  -2.71924   GAGCTGGCGCTAAAC               CAGCAC GAT GCGCTG               CGGCCCGGCATCGCG  53 5
LOY45_RS06505 NONE
LOY45_RS06500 1409526 .. 1409562 -  -5.7  -2.71681   CAATCCGCCCAAGGA    CCAGCCACTGCCCGGTT TGA ACCCGGACAACAGCAAG    GGCAAGGGCAACTAG  48 37
LOY45_RS06490 NONE
LOY45_RS06485 1408242 .. 1408261 -  -2.7  -2.62616   CGATGGTCTACAGCA            GACCGCC GGGCAA GCCGGCC             TGTTCATTCGACTTA  40 38
LOY45_RS06480 1407713 .. 1407726 -  -8.1  -3.39327   CCTGCACACCCATAA               CCAGC GCTC GCTGG                ATGATGTCACCCGGG  58 141
LOY45_RS06465 1405388 .. 1405407 -  -6.4  -4.32046   GCCCGAAAAATCAAA            GGCTGAAA TCAC CCTCAGCC             GCCAACTCGCTCAAC  69 1
LOY45_RS06435 1399833 .. 1399843 -  -6.8  -4.07568   CGGTGCGGCCCAAAA                 GCTG GGC CAGC                 AACAAGGATTTCTAT  68 437
LOY45_RS06425 1397349 .. 1397369 -  -3.1  -4.65895   TCGCCGATCGAAAAA            CGCGTGCTG GCG CAGCTGACG            CCTTACGCCTTGCTG  72 422
LOY45_RS06370 NONE
LOY45_RS06365 NONE
LOY45_RS06350 1383692 .. 1383714 -  -4.7  -3.14132   GGCGGCGCGGATGAA           GCTGTCCGG TAACG CCTGACGGC           CCCATCGCTGGCAAG  47 126
LOY45_RS06325 1377509 .. 1377520 -  -2.2  -3.53343   AAGGTCGGGCTCAAA                CGCT GAGC AGCA                 GGAACTCGCGCTCCC  46 9
LOY45_RS06320 NONE
LOY45_RS06315 1374960 .. 1374979 - -11.4  -3.33737   CAGCAAGGGCCAGAA            GATCGCCG AAGC CGGCGACC             TGGACACCGACCGGG  70 116
LOY45_RS06300 1372348 .. 1372358 -  -5.4  -3.34398   GCCGCCGGGCAAATA                 CAAC CTG GTTG                 CCTCGCGCAATGGGG  52 59
LOY45_RS06290 1370253 .. 1370265 -  -2.6  -3.32647   CGTCAAGGACATCAA                GGAC TATGC GCCC                AGCAAAGGCGATGTG  45 350
LOY45_RS06275 1366455 .. 1366480 - -16.1  -5.06816   ACGCTGTAAGAAAAA         GCCCGCGTCCT GCAA AGGTCGCGGGC          TTTTTCGTTTCTGTG 100 118
LOY45_RS06180 1351810 .. 1351836 -  -8.7  -5.40072   CGGGGCGTAAAAAAA        CCGCGATGGGCA GTGA TGCCG-TCGCGG         TTTTTTGTTTCAGCC 100 43
LOY45_RS06160 1349011 .. 1349039 - -19.7    -3.551   CCCGAATTCAGACAA        GAAAAAGCCCGGC AGT GCCGGGCTCTTTC        GTACTGGGAATACTG 100 53
LOY45_RS06155 NONE
LOY45_RS06150 1345812 .. 1345826 -  -2.1  -3.48276   CCGTCCGGTACAGAA               TGACA GCCGT CGTCA               GTCGGTCAGCGTGGA  47 408
LOY45_RS06140 1344773 .. 1344792 - -13.6  -5.27335   CCGGGCAAAGAAAAA            GGCCACTC GTGA GAGTGGCC             TTTCCTGAATCTGGT 100 37
LOY45_RS06135 1344562 .. 1344583 - -13.1  -5.13473   AGCAGATGCAAAAAA           GGCCACTTT TTTC AAAGTGGCC            TTTTCTGTTGTTTGG 100 38
        mprF NONE
LOY45_RS06125 1340346 .. 1340401 - -27.9  -3.42056   AGCTGCAAGCTACAA GCCTCAAGCTGCAAGCAAGAGCC GTGCGCGATT GGCTCTAGCTTGCAGCTTGAGGC TGACAGCTTGCAGCT 100 58
        rimO 1336783 .. 1336804 - -13.7  -5.76949   TAGTTGCAAAAAAAA           GCCCCGCCA TTGC TGGCAGGGC            TTTTTTTATCGGCGC 100 45
LOY45_RS06110 1336152 .. 1336164 -  -3.3  -2.99649   ACAGCCGTAGACACA                GGGAA AGG TGCCC                ATTGTAACTGCCCCG  42 124
LOY45_RS06105 NONE
LOY45_RS06100 NONE
        tsaA 1334180 .. 1334195 - -10.4  -6.34616   TGAAAACAAAAAAAA              GCAGGC TTCG GCCTGC               TTTTTTTGTGCCCTA 100 38
LOY45_RS06085 1332257 .. 1332267 -  -3.2  -4.56597   CCCGTTGTCGAAAAA                 TGCC AAG GACA                 TGGGCAGTGCTGCCC  69 90
LOY45_RS06065 1329485 .. 1329501 -  -2.1  -3.65046   GGCGCAGGCCAATAA              CCTGAGC CTT GAACAGG              AGTGCCTGCGACGGC  50 144
LOY45_RS06055 1327673 .. 1327683 -  -6.8  -3.03124   GCGTATTCGTGAAGA                 GCTG GGC CAGC                 GCGGGCTGCACCGTG  50 242
        mutS NONE
LOY45_RS05920 1304890 .. 1304904 - -11.4  -5.34055   ATAAACATGAAAAAA               GGCCCT TGA AGGGCC               TTTTTTGTTGATCCG 100 46
LOY45_RS05875 1296031 .. 1296050 -  -2.8  -3.42459   CAGCGACAACATCAA            GGTCACCCG CCC CGAA-GACC            TGGAGTGGCTGCGCC  47 176
         map NONE
LOY45_RS05750 NONE
        dapC 1264961 .. 1265018 - -37.3  -2.93853   GCCGGTGAAGTAAAG CATCGCGGGGCAAGCCCGCTCCTAC CATCATCT GTGGGAGCGGGCTTGCCCCGCGATG GGGCCGTTTACTTCT 100 33
LOY45_RS05735 NONE
        dapD 1261606 .. 1261632 - -15.9  -4.14243   GATCGGACCTGAAAA         TCGGGCCTGGC GTTAG GCCAGACCCGA         TGGTACCACTTAGTT 100 35
LOY45_RS05725 NONE
LOY45_RS05720 1259936 .. 1259967 -  -2.9  -4.08692   CAAGGCGGTGGAAAA     GCT-TG-TGGGCGGC GCCC GCCGCCCGTCCGAGC      GCAAGGCTCAGGCGC  60 33
LOY45_RS05710 1256217 .. 1256254 - -19.9  -2.52543   ATCGCTGGCAAGCCA   GCTCCCACAGGTTGGGT GTTT ACCCGTCCTGTGGGAGC    CGGCCTTGCCGGCGA  95 65
        dapE NONE
LOY45_RS05700 NONE
LOY45_RS05695 1253689 .. 1253731 - -24.3  -3.28791   AGCCTGGGCCCACAA GCGAAAAGGCCCGCCGCCGG ACAA CCGG-GGCGGGCCTTTTCGA AGAAGCAATTTCAGT 100 36
        plsB 1250717 .. 1250741 -  -8.5  -3.53012   TCGTGTTGCTCCAAA          GACACTGGCCA GTA TGGCCTATGCC          GCGGTTTCGGTGGCC  64 19
LOY45_RS05680 NONE
LOY45_RS05675 1249509 .. 1249536 -  -4.9  -2.70932   TGGGCTGCGCAAGCA        GCCCTTTGGAGC GAGAG GCTC-AAAGCGC        GCCAAACACCTTCTT  43 17
LOY45_RS05660 1244438 .. 1244463 -  -4.5  -5.05782   ATCTACCCGAAAAAA         GCCCTCAAGCC TTAA GGCCGGTAGGC          GCGCATGAACAGCGC  81 11
LOY45_RS05650 1242940 .. 1242964 -  -5.8  -3.53012   TGGGCTTCTGGCAAA         TCTGCCGC-TGA GGC TCAGGCGGC-GA         TGCGTACGTTGTTCA  56 15
LOY45_RS05610 1235201 .. 1235218 -  -6.9    -5.626   TAGTTCAGAAAAAAA             TACCGCG TGTT CGCGGTT              TTTTCTGACTGATCG  93 131
LOY45_RS05605 NONE
LOY45_RS05600 1233749 .. 1233780 -   -16   -4.1891   GGCCGGCAACACAAA      CAAAAATCCCGCCA GACT CGGCGGGATTCTTG       TTACTGCTCAGCAAC 100 43
LOY45_RS05520 1216223 .. 1216263 - -11.3  -2.84527   GAAGCTCCAGCAAAT GGGAGCAAGCCCGCGTC TTGAGGTGG GA-GCGGGCTTGC-CCC GCGATAGGGCCCTAG  69 37
LOY45_RS05515 NONE
LOY45_RS05510 NONE
LOY45_RS05505 NONE
LOY45_RS05500 NONE
LOY45_RS05495 1209916 .. 1209926 -  -2.4  -3.21099   CCGGCGCAGTACCAA                 CGGG CTA CCAG                 TCGTGACCAGCCGAT  44 205
LOY45_RS05475 1205096 .. 1205123 -    -4  -3.19192   TGCCACGGAATTCAA        GCAATGTGCCGT TCAG ACCGCTCCTTGC         GCGCGTAGCCGGGCA  46 10
LOY45_RS05470 1203865 .. 1203896 -  -2.8  -3.57144   CGGCGCACCGTCAAA      CCCAGCCAGCTGCAG GAC CAGC-GCCTGCTGGT      CGACCTGGTCGATGG  51 305
LOY45_RS05460 1202789 .. 1202799 -  -2.4  -3.15544   CCTGATGGCGATCAA                 GGCC CTG GGCA                 GCCCGGTGATGCAGG  42 143
LOY45_RS05405 1185693 .. 1185703 -  -2.4  -3.71998   CATTGATGAAGACAA                 GCGC CCG GTGC                 CGGTACTGCCCGGTT  51 120
        ccsA NONE
LOY45_RS05365 1179271 .. 1179291 -  -2.5   -3.1352   GCGCAACTGAACATA            CGCCC TTTGGGGATGG GGGCG            GGCGCGGGCAAGGCT  42 159
LOY45_RS05360 1177801 .. 1177850 - -42.5  -3.06501   TAGAGTTCTAGGCAA TCGCGGGGCAAGCCCGCTCCTAC CGGT GTAGGAGCGGGCTTGCCCCGCGA TGGTTTTACAGCTCC 100 31
LOY45_RS05330 NONE
LOY45_RS05325 1173311 .. 1173332 - -10.2  -3.53224   GAGTTGTGCGGGAAA           CTTCCGAC TTATTT GTCGGAAG            TAGCCTGGAGAGTGA  72 41
LOY45_RS05320 NONE
LOY45_RS05315 1166803 .. 1166828 - -14.8  -3.06183   TGCAGGGGGAGGTAA         CACCGGGTAC GGCCCT GTACCCGGTG          TTACTGGCTGCCGGC  80 102
LOY45_RS05250 1153915 .. 1153959 -   -15  -2.53382   AGCAGGTGCAAGTGA TCAGCCGTTCGCCGCAACCCT GGTA AGGGCTGCGGCGAGC-GCCGC TTGGGTTACACGCCG  80 31
        tatB NONE
        tatC NONE
LOY45_RS05225 NONE
        nagA NONE
LOY45_RS05215 NONE
        ptsP NONE
        nagE 1144309 .. 1144334 - -16.1  -5.41746   AAGGGCTGAAAAAAA         GCCGCGACCTG TGAT CGGGTCGCGGC          TTTTTTGTGTCTGCT 100 103
        mltF 1138039 .. 1138056 -  -3.4  -3.79113   AGCGCCTTACAACAA             CGATAG TGGTAG CCATCG              AGGGCACCGCCAGAT  54 344
LOY45_RS05145 NONE
        xseA NONE
LOY45_RS05135 1124481 .. 1124501 -   -14  -4.45544   CTTCATGAATGAAAA            GACCGCGC CAGTT GCGCGGTC            TTTTTTAATAGCGCA 100 50
        leuA 1122490 .. 1122517 - -22.8  -4.05788   CGGGCGCAAACGAAA        GTGCCCGCCTCC GGAT GGAGGCGGGCAC         TCGGTTGCAGCTCAG 100 49
LOY45_RS05125 NONE
LOY45_RS05120 NONE
LOY45_RS05115 1118257 .. 1118268 -  -5.8  -2.86343   ATGTGAAGGACTACA                TGGC CCTG GCCA                 ATGTGATGTGTGTGG  47 204
        hexR 1114415 .. 1114438 - -12.4  -3.14132   GCGCCGGGTGAGCAA          GCGCACCTGC GTCT GCAGGCGCAC           TTGCTCAGTTGAGTT  74 30
         gap NONE
LOY45_RS05035 NONE
LOY45_RS05030 1099570 .. 1099585 -  -3.2  -3.71378   CAGTGGACATCGAAA              GCGC TCCCTGTC GCGC               GAATGTTATAGGTGC  53 124
LOY45_RS05025 1096905 .. 1096924 -    -2  -3.61371   AAACCTCACCTCAAA            GGCTTTTC ACGG GGCAAGCC             CGCTCCTGCAAAATC  48 71
LOY45_RS05020 NONE
LOY45_RS05015 1095657 .. 1095678 -  -8.7  -2.62396   CAGGCCGGTAGAGGA           CCGAG-CCAC TGG GCGGGCTCGG           TTCGCTACATCCTTT  59 71
LOY45_RS05010 1093450 .. 1093471 - -12.3  -3.14344   TAGCGCGGTCATCAA           TGGCCCTCC AGCA GAAGGGCCA            TTGCAGACCATCAGC  74 50
LOY45_RS05005 1091986 .. 1092002 - -13.7  -2.71731   TTGAGCCTTTAATCA              GGGCTGC GGC GCAGCCC              ATCGCCGGCAAGGCC  75 111
        arcD NONE
        arcA 1087346 .. 1087361 -  -3.2  -3.75153   TCTGGTGAACGGAAA              GCGG TGATCGGC CCGC               CTGCACCCGTGGGTG  53 60
LOY45_RS04985 1086282 .. 1086293 -  -5.8  -2.62184   CCGGCTCCCACAGGA                GCGA AGGT TCGC                 TCCCTGAATGGATTA  48 38
        arcC 1085199 .. 1085220 -  -9.3  -4.24002   CCGCAAAGGTGAAAA           CGGCGGGCC CGCA AGCCCGCCC            ACTGCATTCAACGGT  79 33
LOY45_RS04975 NONE
LOY45_RS04970 1083097 .. 1083121 -  -8.6  -5.41746   AAGCCGGGAAAAAAA          GCGCAAGG GGATCAGAA CCTTGCGC          CATGGCCCTGAAACT  95 87
        gcvH NONE
        gcvP 1079569 .. 1079587 -  -5.8  -2.82623   TGTTGGGGAGAAGCA             TCGCCGGC AAG GCCGGCTC             CCACAAGGTTCTTTG  49 98
LOY45_RS04955 NONE
        gcvT 1076955 .. 1076982 -  -8.4  -4.51196   TCGAAAGTTATAAAA        CGCGTTCGAAAT CGAA AACCCGAACGCG         TCATGACACTCTGTT  79 53
LOY45_RS04945 1076408 .. 1076431 - -14.6  -5.24129   TGCGCGCACAAAAAA          GCCCCTGCTG TTGC CAGCAGAGGC           TTCTTTGTTGATGAA 100 43
LOY45_RS04940 1075832 .. 1075849 - -12.7  -5.24796   TGCACACAAGAAAAA             GCCGACC CTTG GGTCGGC              TTTTTTCTGCCTGCT 100 39
LOY45_RS04925 1071803 .. 1071850 -  -2.4   -3.9777   GGCAATATGTAGAAA TCGACTTTGGTCATGGTCAGCC TGCC GGCCGGCTACGCCCGAAGGCGC AGACGGCCAGCGTCA  54 43
LOY45_RS04920 NONE
LOY45_RS04915 1070958 .. 1071013 -  -5.3   -3.4878   GGAGAGTATAACGAA GCGGCAAGCTTCAAGCGACAAGC TCAGAGCGCC GCACGGCTCTTGCAGCTTGTCGC TTGAAGCTTGTAACT  54 47
LOY45_RS04910 1067979 .. 1068037 - -39.2  -3.53224   GATGTCCGGTGGAAA GCATCGCGGGTCAAGCCCGCTCCCACAG AGA CTGTAGGAGCGGGCTTGACCCGCGATAG CGTCGCTGAGATCAG 100 47
        rlmF 1066900 .. 1066926 - -19.4  -4.60889   AAGCAGCTCGAAAAA         GCCGCGTCCGGG TTG CCCGGACGCGGT         TTTTTTATGCCTCTG 100 106
        yejK 1065147 .. 1065178 -  -8.7  -4.10007   AGAAGCTGCGCAAAA      GCGCCAAGGAAGCC CTGGT GGCCTCC-TGGCCC      GGTCTCAGTCCTTGC  75 30
LOY45_RS04820 NONE
LOY45_RS04815 NONE
        lptC NONE
        lptA NONE
        lptB 1050565 .. 1050585 -    -4  -3.62224   AGAGCGCCGTAACAA            TTAAGCCA TGAAC TGGCTTGA            TCGAGAGCGCTCTGG  52 61
LOY45_RS04795 1048898 .. 1048916 - -10.2  -3.21276   TGCCGGTGCATAAGA             GGCAGGTG TTG CGCCTGCC             ACTGAACTGCGGTGG  68 57
        raiA NONE
        ptsN NONE
        rapZ NONE
LOY45_RS04775 1046922 .. 1046943 -  -8.6  -4.36914   GCTTTCGTGAGAAAA           CGGGGGCG GTTACT CGCCCTCG            TCGAAGTAATTGTTG  79 13
LOY45_RS04740 1040911 .. 1040935 - -13.5  -3.95022   CGCATGAAGATGAAA          CCGGGCAGGCA GGG CGCCTGCCCGT          GTGCGGGGCTCAACG  93 35
        gatC NONE
        gatA NONE
        gatB 1026264 .. 1026285 -  -3.7  -3.87815   CGGCAGCCCCAGAAA           CTGGCAAGGC TTC GCCTTGC-AT           CGCCGGCAACGCCGG  58 61
LOY45_RS04680 1025776 .. 1025786 -  -2.4  -2.84053   TGAAAGTAGGTAAAG                 CGGC CAG GTCG                 AAAATGGTCGTGCTC  39 51
LOY45_RS04675 NONE
LOY45_RS04670 1024274 .. 1024300 -  -8.7  -3.34947   GAAGAAGGGGCAGAA        GGCCGCC-GTCG TCAG CAACTGACGGCC         TCGCCCTAAGTGATC  65 43
LOY45_RS04655 1020093 .. 1020108 -  -3.3  -3.33261   GGGTAATGCTCATAA              GTGAT TTCCTT ATCAC               TGGTGTTGATCGATA  46 22
LOY45_RS04650 1019768 .. 1019783 -  -7.5  -3.39668   GCGCAAACTGCAGAA              GCGCC CGGTGC GGCGC               TGATAGCTTCAAATC  61 144
LOY45_RS04635 1017002 .. 1017032 - -14.1  -3.29325   GTGCTACAAGTAACA      GCGTTCGCGGCAGC CGAA GCTGCCGCGAA-AC       AGCGGAAAAGTAACG  83 45
LOY45_RS04630 NONE
LOY45_RS04625 NONE
LOY45_RS04620 1011670 .. 1011706 - -15.1  -2.70936   CGATTAACCAGAGTA    GCCGTCCCGGTCGATTC GGC GAACCGACCGGGCCAGG    GCGTTCTAGAGGAAA  80 31
LOY45_RS04615 NONE
LOY45_RS04610 NONE
LOY45_RS04605 NONE
LOY45_RS04600 NONE
LOY45_RS04595 1006065 .. 1006084 -    -5  -3.53811   GCGATGGGCTGCAAA            GCAG-CCCT TAG AGGAACTGC            TCGGCGTAATGGCAC  54 13
LOY45_RS04590 NONE
LOY45_RS04585 1003658 .. 1003668 -  -5.4   -2.8478   ATCAGCGCATGAAAC                 CTTC CAT GAAG                 TCCGCCACGCCGCTG  47 1
LOY45_RS04580 NONE
LOY45_RS04575 1002061 .. 1002081 -  -5.3  -4.07568   GTCCCGGTGGTAAAA            GGCAACCGG GGG CCGATCCCC            GCGGCAATCGCTGGA  64 79
LOY45_RS04570 1001402 .. 1001420 -  -2.3  -3.99494   GGAATTCAAGAACAA            GGCCGTGG AAAA CCT-GGCC             ATCGACGGCGGTGGT  57 267
LOY45_RS04560 NONE
LOY45_RS04555 NONE
LOY45_RS04550 NONE
LOY45_RS04545  995854 ..  995864 -  -6.8  -3.15544   GGGGACCGGCATGAA                 TGCC GAC GGCA                 GCTTCAACGGCAACT  51 338
LOY45_RS04525  990080 ..  990101 -  -5.8  -3.02144   GTACTGGCTGGAACA           GGCGTTGC TGGCGG GCAATGCC            AACTTCTTGCGGGCC  48 194
LOY45_RS04510  986259 ..  986284 - -11.1  -4.60797   CCTTGATACACAAAA         GCCCCGGTCAC CTAA ATGAACGGGGC          TTGCTGCTCGCACGA  95 42
LOY45_RS04505  983400 ..  983422 -  -5.4  -2.87132   CCGCGTGGGTACAGA           CGGCAAGGGC TTT GCCTATACCG           GTGACAGCCAGGTGC  45 244
        suhB  963917 ..  963932 - -10.4  -5.81032   TAAGGCCAAAAAAAA              GCACCC CGAA GGGTGC               TTTTTTTGTGTTCGA 100 47
LOY45_RS04360  957464 ..  957479 - -10.4  -5.60993   CCGGGCACAAAAAAA              CCGACC CTAG GGTCGG               TTTCTTGTTGCGTTT 100 40
LOY45_RS04350 NONE
LOY45_RS04345 NONE
LOY45_RS04340  954617 ..  954627 -  -2.4  -2.64616   GGCGGATGCACAGGA                 TCGG ACG CCGC                 CGCGCGCTCAAGGTT  38 61
LOY45_RS04335  953331 ..  953350 -   -10  -3.12351   TCTGTTGATATCCAA            CTGGCCAG GAAG CTGGCCAA             GGAAATTTGATATGA  66 359
LOY45_RS04320 NONE
LOY45_RS04315  951720 ..  951755 -   -11  -3.30007   AACACCGCGCCAGAA    CCGGCTGCGGCCATTC GCCT GCAAGGCGGCAGCCAG     GTCACGGCGTTCTGC  68 261
        selD NONE
        mnmH  946328 ..  946341 -  -5.9  -4.83615   CAGCGCCTACAAAAA               GGCCA TGAC CGGCC                TCGAAGGGCCTCAGC  82 213
LOY45_RS04270  944404 ..  944418 -  -2.1   -3.6682   CGGCAGGTACTCAAA              GGCGCA CAGA TGC-CC               GGGTGGCACTGGCTT  50 166
LOY45_RS04190  929231 ..  929265 -  -8.7  -3.61398   GGGCGCGGCCAACAA    CCAGCTGACCA-CC TTGCAGGT GGCTGATCAGCTGG     AAAGCCGCGGGATTC  65 251
LOY45_RS04180  927248 ..  927261 -  -3.7  -3.47227   CCTGAACCACGATAA               CCCGC GCTG GCTGG                TGGTCTGTGTGTTTG  51 296
LOY45_RS04155  921552 ..  921567 -  -6.8  -3.14051   CGATGTGGACGAAGA              CACCAC CAGT GTGGCG               CAAAGGATCTCCGGT  51 436
LOY45_RS04120  913590 ..  913605 -  -2.5  -3.64703   TGGCGCGGACTCAAA              GGCGCG GTGAT CG-GCC              TGGGCGACTCCTGCT  50 208
LOY45_RS04110  912713 ..  912727 -  -8.6  -2.61383   AGCGTCATGGACAAC               CAAACG GCG CGTTTG               TTAAGACCGTTGGTC  56 26
LOY45_RS04105  911587 ..  911600 -  -3.8  -3.19463   CGCAGCACCCACGAA               GCCT TCGGCC AGGC                CAGTGAATGGCTGTT  47 467
LOY45_RS04095  910293 ..  910307 -  -4.2   -2.8001   ATAACCCCCAGCATA               CCCG AACTAGG CGGG               ATTGCGCGCGCCCTG  44 17
        folM NONE
LOY45_RS04085 NONE
LOY45_RS04080  908776 ..  908786 -  -8.2  -2.82015   GCGATATCGACGAGA                 GCCG GAT CGGC                 CATTTCGCCTTTTTC  55 129
        nadC  898649 ..  898664 - -11.8   -5.4833   TGAGCTAACAAAAAA              CCGGCC TGAT GGCCGG               TTTTTTTGTGTCTGC 100 49
        cysZ  895713 ..  895738 -  -8.2  -3.25223   CATCGACAGCAGCAA         GCGCCAGGCC GAGCAA GGCCTGTCAC          TGGCCGGGCAAACCG  59 163
LOY45_RS04015  892979 ..  892997 -  -5.9  -3.35679   GGTCGCGACCGACAA             GGTGGCC CAGCC GGCCAGC             CTGGAAAACCTGCTC  53 153
         pta NONE
LOY45_RS03985 NONE
LOY45_RS03980  886712 ..  886724 -  -6.2  -2.78384   TGGCGGTCGAGCATA                CCCG TGAGC CGGG                GCGAGGGTTTCTTCA  46 250
LOY45_RS03925 NONE
LOY45_RS03920 NONE
LOY45_RS03915  871008 ..  871030 -  -6.9  -2.79796   GCGCAGTTTACCAGA           GCCTGGCCT GGCTT AGACCTGGC           GGCGCGGGCTGCCGG  51 15
LOY45_RS03910  869813 ..  869840 -  -8.3  -3.53563   ATAGGTCTTGTCAAA        CCCTGGGTCCG TCTGTG CGGACCGTGGG         TCGCACGCGCCATGG  64 155
LOY45_RS03905  869064 ..  869108 - -15.8  -3.02144   CCATCGCCGGCAAGA CCGGCTCCCACAGGGGCCTGT GTAT ACAAGG-CCTGTGGGAGCTGG CTTGCCAGCGATGAA  83 52
LOY45_RS03895  865679 ..  865713 -  -9.2  -3.57144   GGCTTGATCCCGAAA    CCCCGCCAGC-GCGC TTGTAC GAGCTGCTGGCGGGC     GGCCAGGCACCGCTG  68 224
LOY45_RS03875  863372 ..  863398 - -10.1  -2.52543   ATCGCTGGCAAGCCA         GCTCCCCCAGA GTGTT CCTGTGGGAGC         TGGCTTGCCAGCGAT  62 60
LOY45_RS03865  862646 ..  862687 - -21.1  -3.15197   GAATAAATCCCAACA GCAAAAAGCCCGATGTCTGC GTG GCAGGCATCGGGCTTTT-GC GTTTCTGGGCGCTCA 100 38
LOY45_RS03855  861259 ..  861281 -  -2.7  -3.61178   GGCACCCATTGCAAA          TGAGC-GCTG TTGC CAGCTGTTCA           GGGCTGTTCGGGACA  50 387
         mqo  859500 ..  859513 -  -9.5  -5.60993   GCGCCCATAAAAAAA               CGCCC CGAA GGGCG                TTTTTTTATGCCGGC 100 44
         upp NONE
LOY45_RS03820  855356 ..  855384 -  -8.7  -3.16267   TGCAAGCAGATTGAA        TGCAAGGGGCCGC TGT GCGACCCATCGCC        GGCAACGCCGGCTCC  63 120
LOY45_RS03805  852211 ..  852246 -  -8.2  -2.61873   AGGATGTCGAAACAC    GCGCAGCGGGGCTG AACAGAAG CAGCCCCGATAAGC     TATTCCAGGTGTTCC  56 25
LOY45_RS03800 NONE
LOY45_RS03795 NONE
        phrB NONE
LOY45_RS03785  847656 ..  847682 -  -6.5  -3.17075   GGGCCTGCAATCGAA         CTGGGATGCCA GCTGG TGGCAAACCAG         CGTAGGCCGTATTAC  51 399
LOY45_RS03750 NONE
        lolB NONE
        ispE NONE
LOY45_RS03735  839186 ..  839196 -  -2.4  -2.57266   AGTATAAGGAAAATG                 GCAG GGG CGGC                 TGGATTCGAACCAAC  38 13
LOY45_RS03730  838124 ..  838156 -   -25  -5.00616   GGGGTGGGCAAAAAA      GCCCCGCCCCAACA ACCAG TGTTGGGGCGGGGC      GCTTTTCGTCAACGA 100 63
LOY45_RS03725  837439 ..  837472 -  -6.7  -3.03159   GTAACCCGGTCAACA     CCGGCG-TGCCGAGTA GAT TACTCAGCAGCGCCTT     CTGCAGCTTCAGGCG  53 9
         pth NONE
        ychF  835607 ..  835631 - -16.5  -5.30616   GCAGGCAAAGAAAAA          CCCCTTGAAGC ATA GCCTCAAGGGG          TTTCGGGCTCATCCG 100 66
        ppk2  834704 ..  834720 -  -5.7  -3.85698   GGTGCCTTTCAGAAA              CGCTCGG GAA CCATGCG              CGAGGTGTAGCGGGT  61 2
LOY45_RS03695 NONE
LOY45_RS03685 NONE
LOY45_RS03680  829678 ..  829689 -  -3.6  -3.22298   GTGACGCAGCAGGAA                CGGC AATT ACCG                 AAAACTAAAAAAATT  48 52
LOY45_RS03675  827180 ..  827197 -  -6.3  -3.15579   TTAACGCGCGATCAA             CCGCTTA GCCG TAAACGG              GCTCAGAAGTCATAT  52 28
LOY45_RS03670  826997 ..  827018 - -14.5   -5.4833   GCAGGCAAGAAAAAA           GGGCTTACC TTGC GGTAAGCCC            TTTTTAGTACTTGGT 100 37
LOY45_RS03660  825034 ..  825049 - -10.4  -3.03124   TGCTACTGCTCAAGA              CCCTGG GTGA CCAGGG               CGTGCTCAAGCGCTA  62 323
LOY45_RS03650  823310 ..  823345 -  -5.2   -2.5805   ACCATCGTCCAGAAT    GCCTGGCACCG-TGGGC AGA GCCTGTCGGTGCATGGC    TGCATCTATGGCATC  43 194
LOY45_RS03640  822183 ..  822194 -  -5.8  -3.18735   GGAAGAGCTGATGAA                GCGT GCCT ACGC                 AATCAATGGCCGCGA  51 196
        mksB NONE
        mksE NONE
        mksF  816125 ..  816140 -  -8.2  -3.53444   CGATGGGGCCTGAAA              GGCCCC TGAA GAGGCC               ATCAAGCCGAAGCTT  64 27
LOY45_RS03585  811060 ..  811074 -    -5  -4.45083   CGTACAGGTACAAAA               CCTACA TTG TATAGG               GTTTTGACCGTCTGA  70 81
LOY45_RS03580 NONE
LOY45_RS03575  809863 ..  809876 -  -4.5  -4.07568   CTTCCTGGCTGAAAA               CGCCA AGCG TGACG                GCATCACCTCCCTGG  62 463
LOY45_RS03545  804725 ..  804746 - -18.7  -3.80174   AGAGGCGGACAACAA           CCCGCCCCG GTGA CGGGGCGGG            TGGGCCGAGCTTAAG 100 36
LOY45_RS03540 NONE
LOY45_RS03535 NONE
LOY45_RS03530  801241 ..  801272 -  -2.8  -4.62783   GATGGAGCTGAAAAA      CGTCAAGCGCGGCCG TAT CAGC-GAGCTGGCCG      AGCGTTTTGGCCTGG  72 474
LOY45_RS03515  794336 ..  794374 -  -5.2  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAAGGAACGG TGCATG CAGAACCT-GTGGGAGC   TGGCTTGCCAGCGAT  46 45
LOY45_RS03510  792885 ..  792939 - -20.3  -2.80291   AATTAGGGCAGCACA GGGGCA-GATACAAAAAAGCCCGGCT CAAG AGCCGGGCTTTTTCACATCATGCCGC TGTGCTTACTTGCCG 100 31
LOY45_RS03505  791776 ..  791795 -  -7.8  -3.32844   TCGGGTAGTGGACAA            CGGCAAGA TCGA TCTGGCCG             AGCTGCTCGATGTCC  58 443
LOY45_RS03485  788124 ..  788134 -  -5.4  -3.14683   AGATTGGCGTAGGAA                 CAGT CCT ACTG                 ATGGTTTGGCTTCAG  50 179
LOY45_RS03480  786458 ..  786479 - -17.3  -5.27335   GCGCTGAAACAAAAA           GGCCGGTGC ATGT GCACCGGCC            CTGAAGATTCAACCG 100 50
        mscL  774034 ..  774051 - -14.1  -5.16071   AAGCAGCAAGAAAAA             CGGCGCC CGCA GGCGCCG              TTTTTTTATACCGGA 100 31
LOY45_RS03415 NONE
LOY45_RS03410  770654 ..  770676 -  -4.6  -5.49569   GACGAAGAGAAAAAA           CCGCTCTGGC AGC GCCTGGGCTG           GTTGGCGCTGATCTG 100 293
LOY45_RS03390  766159 ..  766183 -   -15  -4.56597   CCCGGGGGCGAAAAA          GGCGCGCAGC ACATG GCTGCGCACC          AACCGCTGGCGCAGC 100 409
LOY45_RS03375 NONE
        trmA  762777 ..  762799 - -13.5  -2.52543   ATCGCTGGCAAGCCA           GCTCCCACA GGGTG TGTGGGAGC           TGGCTTGCCAGCGAT  75 55
LOY45_RS03360  760160 ..  760170 -  -3.2  -3.50853   CGTCTGCAACGAGAA                 CATG CAC CACG                 GCGAGTACGTCAAGC  49 404
LOY45_RS03345  756163 ..  756180 -  -9.8  -2.87132   TGCTGTTCGGACACA             GCCCGG ACATGG CCGGGC              TGGTGGGGATTGCCT  58 87
LOY45_RS03325  751722 ..  751776 - -16.6  -2.62184   CTGCTTTGCAGACCA TCGCTGG-CAACGCCAGCTCCCACAA TAAAT CTGTGGGAGCGGGC-TTGCCCCGCGA TCATTCGTACGTTGT  85 26
LOY45_RS03310  749213 ..  749260 -  -4.9  -3.08996   CAGCGGTAGGTAACA GGGCATTTCTGCGGCCAGCCTGA GACT TCAGG-TGGCCGC-GAAACGGTG GGGCAGGCGGGTCAG  47 37
LOY45_RS03305  746798 ..  746813 -  -2.4  -4.56597   CTGCCGCTGGAAAAA              GCCGTG GCTG CGCAGC               GCGTGCATCACCAGT  67 354
LOY45_RS03285  742955 ..  742973 -  -4.4  -3.73224   TGAGCCGCGACGAAA             TGGTCCAG GCC CTGGGCCT             GTCGTTCAGCGTCTC  56 235
LOY45_RS03275 NONE
LOY45_RS03270 NONE
LOY45_RS03265  738959 ..  739004 -    -4  -3.14132   CCCGCGCTTGATCAA GCCTGGCTCGCGCGCAGT-GCTC ATC AAGCGACC-CGCTGG-GCCAGGC TGACGCTGAAGATGC  46 3
LOY45_RS03260 NONE
LOY45_RS03255 NONE
LOY45_RS03250 NONE
LOY45_RS03245  735254 ..  735269 -    -9  -3.30124   CGGTACCCTGCACAA              GCCGAT GCGC ATCGGC               ACCCGCGAGAAGCTG  60 395
LOY45_RS03235  733801 ..  733815 -  -2.7  -2.82635   AGGTCCATCACCATA               GGCGC GATCG GTGCC               CGGCAAATGTCTGGT  41 77
LOY45_RS03230  733084 ..  733095 -  -7.2  -3.39327   TTCGGATACCTACAA                CCCG TGGC CGGG                 CATTATCGAGACGGC  55 347
LOY45_RS03215  729707 ..  729725 -  -3.8  -2.78813   CGCCACTGTAAGAAC             CCTTTCGA CTG TCACAAGG             TCTGTACCAACCCTG  43 107
LOY45_RS03210  728148 ..  728159 -  -2.2  -3.68073   GATGGTATCCAACAA                CAGA GTAG CCTG                 CCCCAGCTCCCTCTG  48 211
LOY45_RS03205 NONE
LOY45_RS03120  701958 ..  701980 - -11.3  -2.78384   CGGCGTCCGATTACA          GGCAAGCGCC GGTG GGCGC-TGCC           TGATGTCGTTGTTCA  69 54
LOY45_RS03115 NONE
LOY45_RS03110 NONE
LOY45_RS03105 NONE
LOY45_RS03100 NONE
LOY45_RS03095  696974 ..  696985 -  -3.6  -3.50447   TCAAGGTGGATATAA                GCCC GTCA GAGC                 CCGGTCCGAAGCCAA  50 200
LOY45_RS03090 NONE
LOY45_RS03085  694570 ..  694582 -  -3.3  -3.54424   GGTTACCCCGGGAAA                CCTTC AAC GATGG                CGAAACCAACGGGAT  50 108
LOY45_RS03080 NONE
LOY45_RS03075  692052 ..  692067 -  -4.6  -3.30124   TCGGAGTTGGCACAA              CTCCCG GCGT CTGGAG               TGCTTGCCGATCAGT  49 241
LOY45_RS03060 NONE
LOY45_RS03055 NONE
LOY45_RS03040  686338 ..  686356 -  -4.5  -3.27298   GGCCTCAAGCATCAA             CCTTGCC ATGCG GGGAAGG             TCAATAGCCCAGGCC  49 26
LOY45_RS03035 NONE
        cueR  683389 ..  683407 -   -11  -3.55444   GGGTGATGCGCGAAA             TCGACGCG GCG CGCATCGA             TGACGCCCGCCGGCG  72 117
LOY45_RS03020  680099 ..  680116 -  -7.7  -3.02144   GCATTCTGGCCAACA             TGGCCAA GTTG CTGGCCA              CCGCCGGCAAGGGCC  54 281
LOY45_RS03005 NONE
LOY45_RS03000  676580 ..  676612 -  -3.3  -3.17075   GCCGTCGCAACGCAA     GGGGTGCTGTCAGC TCAATG GCCGCCAGG-CCCC      GCGCATGTGCACCAG  43 2
LOY45_RS02995 NONE
LOY45_RS02990 NONE
LOY45_RS02985 NONE
LOY45_RS02980  674203 ..  674229 - -13.7  -2.81072   TGTAGTCAACATAAT         GGCCAGTCGCC TGCAT GGCGACTGGCG         GGTGAGGCTCAACGT  76 34
LOY45_RS02975  672105 ..  672136 -  -5.6  -3.14564   GCAGGTGCTGATCAA      CCTGCTGGTCAACG CCCG CGATGCCCTGCTGG       CCCGGCGGGAGCAGC  49 303
LOY45_RS02960 NONE
LOY45_RS02955  667477 ..  667492 -  -2.4  -4.38712   CGGAGCTTGAGAAAA              CCGCGC AGTT GCTCAG               CGTCGACGAGTTCAG  65 360
LOY45_RS02920 NONE
LOY45_RS02915 NONE
LOY45_RS02900  656500 ..  656510 -  -6.8  -4.11216   CCTGGAGCTGGAAAA                 CCAG AAC CTGG                 CGCAAAGCGCGGCAA  68 386
LOY45_RS02890  650002 ..  650035 -  -2.3  -3.44206   GAACATCTACCAGAA     CCCGAACGGCAGCGTG TAC CACGCCGGTAT-CGAG     ACCCACGACACCATC  47 333
LOY45_RS02865  644047 ..  644059 -  -3.3  -3.83561   GTCGGTGAAAAAAAC                TGGCA CAT TGCCT                TTATGCTTCAACCCG  53 26
LOY45_RS02860  641940 ..  641951 -  -5.8  -3.02471   TTCGGAGTACACACA                TCCC CTGT GGGA                 GCCGGCCTTGCCGGC  51 64
LOY45_RS02855  640009 ..  640025 -  -4.4  -3.05463   ATTTCGGTCATCGAA             GCCGGCT TTTT AGC-GGC              CAGAGGAAGTTATAG  47 35
        aroQ NONE
        accB NONE
        accC  637436 ..  637459 - -18.2  -5.42259   GGAGCCCCAAAAAAA          GACCCCGGTC ACGG GACCGGGGTC           TCTTTTACATCACTG 100 46
        prmA NONE
LOY45_RS02830  634986 ..  635004 -  -2.3  -2.78463   AGGGTTGGCATGATA             CCCGCTC TCGGT GACCGGA             TAAAGATGGATTTGG  39 163
        dusB NONE
         fis  633551 ..  633576 -  -6.1   -5.1675   GGAGTCAGCAAAAAA         GGCGAC-CTCAT CGA ATGGGAGCCGCC         TTTTCTGGTTTGGAT  86 47
        purH  631785 ..  631798 -  -8.1  -5.21236   AAGCTACAAGAAAAA               GCAGC CAGT GCTGC                CCTTTGCGTAGCTTG  93 135
        purD  630374 ..  630388 -  -9.2  -3.19246   CCAAGCCGAAGGCAA               GGCCCA TGG CGGGCC               CTGTCGACGAGCCGG  63 81
LOY45_RS02805 NONE
LOY45_RS02800  626538 ..  626550 -  -6.9  -3.55071   CGATAGCGCGCTAAA                GGCCA TCT CGGCC                GTCGCCGGCAGCCAG  57 370
        cbiE NONE
LOY45_RS02755 NONE
LOY45_RS02750  617243 ..  617254 -  -5.8   -3.2822   AAACAAATCCATCAA                GGCA AGTC TGCC                 AGCAGCTTTGAAGGA  54 10
LOY45_RS02745 NONE
LOY45_RS02740  615366 ..  615402 -  -9.3  -4.82667   CCAGTATAGGAAAAA    TTACCGGGGGTGCGG TGAAGTG CCGCACTCCCGGTTC    GCATCAGGCCTGCTT  86 29
LOY45_RS02735  614869 ..  614881 -  -3.3  -3.01712   GGGCGTTCTTGAACA                TGGTG ATT CTCCA                GTCGAGTCAGGTTCG  42 61
LOY45_RS02730 NONE
LOY45_RS02725 NONE
LOY45_RS02720 NONE
LOY45_RS02715  610364 ..  610382 -  -8.8  -2.79004   TGACGCCGAAAACAG             GCCCGTAT CGA AAACGGGC             GCTCATGTTAGCGGA  60 28
LOY45_RS02710 NONE
LOY45_RS02705 NONE
LOY45_RS02700  607509 ..  607525 -    -5  -3.05844   GCCGCTAGGCTAACA              CGCGCC TTCCT GGCGCT              AGCGCGACAATACGT  50 69
        cycA  605763 ..  605784 -  -7.9  -3.45023   CGAGTACGACGAGAA           GGCG-GGCGC CTG GCGCTTCGCC           CTGTTGCAGTTCAGC  60 272
        urtA  603920 ..  603936 - -15.1  -3.05384   TGGCTTGCCAGCGAA              GGGCCGC AAA GCGGCCC              CGACAACTCAGTTGC  83 33
        urtB NONE
        urtC  601190 ..  601204 -  -2.7  -2.56164   GGTTCAAGCATGAAT               TCCGG GTGCA CCGGC               GGTAGCGGGATGACT  39 42
        urtD NONE
        urtE NONE
LOY45_RS02660  599010 ..  599026 -  -2.9  -2.54634   GGTTACACGATTAAG              CTGCGCA GCA TTCACAG              GCGTCACTCCATTGT  39 29
LOY45_RS02655  598365 ..  598375 -  -8.2  -3.06302   AGCATGCTCAGGCAA                 CGCC TGG GGCG                 GTTTGTGCAGGGCTG  60 153
LOY45_RS02640  595673 ..  595689 - -15.1  -3.53012   GCGTTGCCGGCGAAA              GGGCCGC AAC GCGGCCC              CGGCTATCTCAGCCG  88 34
LOY45_RS02630  592933 ..  592989 -  -4.1   -3.9407   CTGAAGAAAAAGTAA CGTCTGCTGCTGGCGGCAGGCCCGC GGTTCTT GCGAGCCTGTCGCCACCCCCCTATG ATCCGCGGCCCGGGC  58 472
LOY45_RS02610  590602 ..  590655 -  -3.3  -3.16564   CCTGGACGGCAGCAA TCGCTTCTGCCGCCTGTTCGCCCGCAC CTTC GTGCGGG-AAA-AGG-GCCAGT-GCGA CGGCATGGTCGGGCG  43 175
        osmE NONE
LOY45_RS02595  588473 ..  588486 -  -2.3  -3.37245   GGATTTGAAGATCAA               CCCCG AGTC CAAGG                GCGTGCGCCTTATTT  45 375
LOY45_RS02585  585818 ..  585837 -   -15  -4.96501   CGCCAGAAAAACAAA            GCCCGGTC AATG GACCGGGC             TGGGAGGGGAGCTAC 100 77
LOY45_RS02580  584998 ..  585014 -  -2.2  -3.79519   AATGGTAGCAGGAAA              CGGC GGCGACTTT GCCG              GCCTCATCGCTGGCA  51 136
LOY45_RS02575  583685 ..  583697 -  -5.5  -3.40907   GCACATCAACATCAA                CAGCC TCG AGCTG                ATGCCGGTGAGTCAG  53 166
        pncB NONE
        nadE  574719 ..  574732 -  -9.5  -2.75064   CCGGCGATTCAATCA               GCGCC TCAA GGCGC                GAATGGCATCTCGCG  63 17
LOY45_RS02520  573097 ..  573115 -  -8.8  -3.14211   ATGCCGCGGGATGAA             GCTGCTGC TTT GCAGGAGC             GGGCTTGACCCGCGA  63 150
LOY45_RS02495  559190 ..  559210 -  -5.4  -3.80841   ACGACGACGAGTAAA           CCGCTCAGC CATC ACTG-GCGG            CCCTGAACAGTTCAC  59 9
LOY45_RS02455  551581 ..  551594 -  -2.3  -2.83403   CGTGTTGCAGTAAAT               CTCAG ATGC CGGAG                GCGATTCTAAGATTT  39 46
LOY45_RS02450  551415 ..  551428 -  -9.5  -5.42514   GCAGAAACGAAAAAA               CCCGC TTTC GCGGG                TTTGATCTGAATTGG 100 38
LOY45_RS02445 NONE
LOY45_RS02440  548197 ..  548207 -  -2.4  -4.29049   CAAGGAGCAAAAGAA                 GCGG TGG CGGC                 AATCAGTCTGGCTGG  63 501
        queG  533016 ..  533045 -  -3.3  -3.28745   GTCTCAATAATGCAA       CCCGCCTGGTCCC CTGT GGGAGCTGGCTTG        CCAGCGATGGCCGCG  46 49
        rsgA  530474 ..  530499 -  -4.7   -3.2327   GCAAGGTACGACCAA         CAAACAAGATG CGCC CTACTTGTTTG          GGTAAAAAGTCCTAC  49 94
LOY45_RS02355  529782 ..  529809 -   -17  -4.07568   CTGCTTGCGTGAAAA        CGCCCGTGCGCA GCGA TGCCCACGGGCG         TTTTTTTGCGCTACA 100 43
LOY45_RS02340 NONE
LOY45_RS02335  525368 ..  525387 -    -2  -3.53444   TTAGGTTTCCTTAAA            CTTCGACA GGGG TGTCGGGG             TGGTTGCCCCATTCG  46 1
         asd  524462 ..  524479 - -12.7  -4.76041   CACAGGTATGAAAAA             GCCCGCA TTGA TGCGGGC              TTTTTCATTTTCAGG 100 36
LOY45_RS02320  521501 ..  521518 - -12.7   -5.5112   GTCAGCAATAAAAAA             GCCCGCA TCAC TGCGGGC              TTTTTGTGTAGCAGG 100 44
LOY45_RS02270  510755 ..  510785 -  -3.8  -4.12188   CGACGAGTCGGAAAA       GGCCTTCGCCGA CATTCAC TCGGCGGCGGTC       TCCAGCGGATTGCTG  62 375
LOY45_RS02250  504800 ..  504829 - -19.4  -3.02144   CCATCGCCGGCAAGA       CCGGCTCCCACA GGTTTT TGTGGGAGCCGG        TCTTGCCGGCGATTG 100 45
LOY45_RS02235 NONE
LOY45_RS02230 NONE
LOY45_RS02225 NONE
LOY45_RS02220  498893 ..  498906 -  -3.8  -4.09864   AGGCACGCCGGAAAA               CCTG CTGAGC CAGG                TCAAGCCGGATGTGT  62 236
LOY45_RS02200  493812 ..  493822 -  -4.6  -2.53213   GAAGCGCTCAATCCA                 GCAG CGC CCGC                 TCGAGTTCGGCCAGG  43 7
        putA  478658 ..  478712 - -30.2  -3.85698   TTTCTGGGCTAGAAA GCATCGCGGGCCAAGCCTGCTCCTAC GTT GTAGGAGCGGGCTTGACCCGCGATAG AGGCGCCGCAGGCTA 100 41
LOY45_RS02135  475570 ..  475603 -    -8  -3.09492   CGGTCAACTCGAACA     TGCGGGAACCTCCG TGTGCG CGGTGGTTCCCCCT      CAGAACCACTCGTCG  60 25
LOY45_RS02130 NONE
LOY45_RS02125  472706 ..  472716 -  -2.4  -3.31144   TGGGCATCTCTACAA                 GGTC GAG GGCC                 TCATCGCCGGCAAGC  44 106
        mdtD NONE
        dbpA  469756 ..  469812 - -38.4  -2.53263   TCGATGGTGAAGCTA TCGCGGGGCAAGCCCGCTCCTACA GCGATGGTG TGTAGGAGCGGGCTTGCCCCGCGA AAAGGTAATTAGACG 100 34
LOY45_RS02110  468457 ..  468507 -   -17  -3.68351   GGGCGATGATCGAAA TTGAGCCAATCAGATGGCAGCAGT GTT ACCGCTGCCATCTGACCAGCAAAA TTTGTTCCTTGATGC 100 60
        yccS  466195 ..  466206 -  -3.6  -3.83205   ATCGCCCAGATGAAA                GCCG ATGG CAGC                 TACGCCCGGTTGCTC  56 59
LOY45_RS02095  464772 ..  464793 - -10.9  -2.52543   ATCGCTGGCAAGCCA           GCTCCCACA CAAT TGTAGGAGC            GGGCTTGCCCCGCGA  64 46
LOY45_RS02045 NONE
        metK  452867 ..  452892 - -18.3  -5.24129   CGCTCCTACAAAAAA         GCCCCAGCCGA GTGA CCGGCTGGGGC          TTTTTTTACAACTTC 100 46
        ligB NONE
LOY45_RS02030  450489 ..  450505 - -15.1  -3.18912   TCACTGAGTGATCAA              GGGGCGC GGG GCGCCCC              ATCGCTGGCAACGCC  83 131
LOY45_RS02020  448460 ..  448472 -  -6.9  -3.29461   CAACCTGCGCCAGAA                CCACG ACC CGCGG                GCTTTCCTCGACAAG  54 305
LOY45_RS02005  446040 ..  446053 -  -8.1  -3.68738   TACCTCAAGACACAA               GCTGG CTTG CCAGC                GATAGCGGCCTCAAG  66 36
LOY45_RS02000  444691 ..  444722 -  -3.6  -3.63569   CGAAGTGCGCAACAA      GATCACCCGCAAGA GCAT CCTCACGGTCGACC       GCATGGTCTTCGTCA  52 206
LOY45_RS01990 NONE
LOY45_RS01985  442933 ..  442953 -  -6.7  -2.77344   CCACCGTCGAATAAT            GCCGGGCGA TTA TAGCCGGGC            TTTTCGAGCTTCCCA  51 64
        ahcY  441294 ..  441348 - -24.5  -3.42056   AGCGGCAAGCTACAA GCCGCAAGCGACAAGCAG-AAGCGGC GCGA ACCGCTTGCAGCTTGCCGCTTGCAGC TACCAACTATCAGTA 100 35
        metF  440349 ..  440372 -  -8.8  -4.49337   TGAGAATGCAGAAAA          GGCCCTTAGC GTAA GCGAAAGGCC           TTTTCAGAATTCTGA  81 72
LOY45_RS01970  439173 ..  439211 -  -4.7  -2.62396   CATGGCTGGAGATTA  CGACGTGTGCACGGCTA TGGCTAG TAGCCGTGC--ATGTCG  ATCCAGCCGGGTTGT  43 40
LOY45_RS01965 NONE
LOY45_RS01960  436233 ..  436252 - -16.4  -5.47159   CGCAACAAACAAAAA            CGCCGCCC CTAG GGGCGGCG             TTTTTGTTGGCGCGC 100 49
LOY45_RS01940 NONE
LOY45_RS01935  430293 ..  430310 - -12.7  -2.62175   CTGCAAGAGATCAAG             CCGCGCT CCGA AGCGCGG              GTCCTGTCGATCATC  67 265
        gshB  419296 ..  419309 -  -5.2  -4.67904   CAGCAACTGCAAAAA               CCGG GAAAAA CCGG                CAGAGCAGGTGCCCA  73 100
LOY45_RS01890  418269 ..  418285 -  -5.9  -4.07568   GTTTTGCGGGCAAAA              TTGATGC GCG ACATCAA              CAGAATCCTTTCTTG  66 107
LOY45_RS01885  417255 ..  417269 -  -2.8  -3.31144   CGGCCACGCTGACAA               GGTG CTGGCGT CACC               TTGTCAGCTTTACTG  46 46
LOY45_RS01880 NONE
        ruvX  416171 ..  416198 -  -7.6  -3.01712   GCTTGCTCCTCAAGA        GGCCGGG-GAGCG GTG CGCTAGCCCGGCT        TGAATGCGATGATCG  56 45
        pyrR NONE
LOY45_RS01865 NONE
LOY45_RS01860  413181 ..  413193 -  -5.5  -3.04715   CAGCGGGGCGAAAAT                GCCTG ATG CAGAC                TCATATGGGGGTGGT  48 184
        hslV  412584 ..  412604 - -15.4  -4.09864   AGTCAGCGTGGAAAA            GCCCGGCC ACCGG GGCCGGGC            GCCAGAACAGCTGAA 100 41
        hslU  411142 ..  411185 - -13.3   -2.5409   ACAAGCTGCAAGCTA CAAGCTGCAAGAGAAG-GCG TCCAG CGCGCTTAACTTGCAGCTTG CCGCTTGAAGCTTGC  75 45
LOY45_RS01845  410652 ..  410668 -  -9.4  -3.03124   TGGTATTGCGCAAGA              CGGCCA GTCAT TGGCCG              TGGTGCAGGCATTCA  61 87
        phaC NONE
        phaZ NONE
        phaC NONE
LOY45_RS01825  405043 ..  405063 -    -4  -4.73388   AACCTGCAGCAAAAA            CTGCAG CGGCTAAAC CTGCAG            CCAAGCCAGCGGCGA  78 320
        ubiE NONE
LOY45_RS01800 NONE
        ubiB  400480 ..  400500 -  -4.7  -3.09831   TCGACTCCAAAACCA            GGTTCGA TCCGTTG CCGAACC            CTTGCGCTAGTGTGC  47 60
        hisI NONE
LOY45_RS01785 NONE
LOY45_RS01780 NONE
        tatB NONE
        tatC  398255 ..  398271 -  -3.6  -3.14132   GGCCTCTTCGAGTAA              CAGCAG GTTCA CGGCTG              GGTCGCTGGCGGCTG  46 17
LOY45_RS01765 NONE
LOY45_RS01760  395361 ..  395373 -  -4.7  -3.76224   GTGTCACCCACGAAA                TGGGC TTT GCCCG                CGAAGTGGCGGATCG  58 216
LOY45_RS01685  376588 ..  376635 - -27.2  -3.57144   GCCTTGATGCCCAAA TCGC-TGGCAAGCCCGCTCCCAC AGT GTAGGAGCGGGCTTGCCCCGCGA TGGCGTAATCAGCCC 100 34
LOY45_RS01670  373127 ..  373137 -  -8.2   -3.5393   ATGAGTGGCTGCAAA                 GCCC GCA GGGC                 TGGCTCGGTCTGGTG  62 514
LOY45_RS01650  368603 ..  368628 - -21.9   -4.4078   CCGGCTGAATGAAAA         CGCCCCCGGTC GCAA GACCGGGGGCG          TTTTTGTTTGTGCGG 100 131
        glnA  363382 ..  363399 - -12.7  -5.35224   GTCAGAAAAACAAAA             GGCCTCC CGAA GGAGGCC              TCTCTTGCACTACGC 100 63
LOY45_RS01630  362601 ..  362613 -  -3.3  -4.17316   AGGCTCCGAAAAGAA                GCGGA ATT TCCGG                ATTAAGACCTGTATT  58 153
        glnL NONE
        ntrC  359667 ..  359677 -  -8.2  -3.93367   TGCGCGAATAAAAGA                 GGGG ATT CCCC                 GGCCTGCCTGTACCA  71 314
LOY45_RS01610  358695 ..  358710 - -11.8   -4.7497   GCGATGTAGCAAAAA              GCGCCC TGAT GGGCGC               TTTTTTCTTGGGGAT 100 86
        gpmI  355625 ..  355657 -    -5  -5.75945   AGGCTGCAAAAAAAA     CGGCTT-TAGC-TGCA AGC TGCAAGCTACAAGCGG     CAAGAAAAATGGGTG 100 83
LOY45_RS01585  354229 ..  354258 -    -7  -2.62184   GCGCTCCGTAGAGCA       TCGGCGCAGCCC GAAGTT GCGCTACGCCGT        CAAATAGGGGGTGTT  50 43
LOY45_RS01580 NONE
LOY45_RS01575  352023 ..  352042 -  -7.8  -3.62046   CGAGGTGGTGAACAA            GCTGCAGC AGGC GCTGGAGC             AGATGCGCAGTGACG  63 66
LOY45_RS01565  349229 ..  349269 - -11.2  -3.46534   CAAGGCGATGAAACA GGACAGCCAGGTCGAGC AGGAGCAA GC-CGAACTGGCTGCCC  GTGGTCGTCGCGGTT  72 520
        betI NONE
        betB  345045 ..  345069 -  -7.7  -3.05343   GTGAGAGCTGCAAGA          GCCGGTTGGCG CAA CACGCACCGGC          TTTGACTTGCAGCTT  57 61
        betA  343140 ..  343155 -    -9  -5.60993   GCGGGTACAAAAAAA              GCACCT CGCA AGGTGC               CTTCTTTGTGTTGCT 100 132
LOY45_RS01540  341287 ..  341298 -  -3.6  -3.89756   AGTTTAAAGGAACAA                CCCA GGGC CGGG                 TCGAGTACCTTCGGG  58 2
        mscK NONE
LOY45_RS01530  336379 ..  336389 -  -3.2  -3.23216   CGTCACGACGAGCAA                 CTGA TCT CCAG                 GTGCTTGCCCCACTC  46 2
        trxC  335804 ..  335814 -  -6.8  -3.30159   GGAACCGCGGCACAA                 GCTG ACC CAGC                 AGTTCGTCGAACTGC  55 63
LOY45_RS01515 NONE
LOY45_RS01510 NONE
LOY45_RS01505 NONE
LOY45_RS01500 NONE
LOY45_RS01495 NONE
LOY45_RS01490 NONE
LOY45_RS01485 NONE
LOY45_RS01480 NONE
LOY45_RS01475 NONE
LOY45_RS01470 NONE
LOY45_RS01465 NONE
LOY45_RS01460  324021 ..  324033 -  -4.1  -3.82824   CAGGACCCAGAACAA                CACGA TAC TCATG                CCGCCTGTTCCTTGT  55 21
LOY45_RS01455 NONE
LOY45_RS01450 NONE
LOY45_RS01445 NONE
LOY45_RS01440 NONE
LOY45_RS01435 NONE
LOY45_RS01430 NONE
        fabG NONE
LOY45_RS01420 NONE
LOY45_RS01415 NONE
LOY45_RS01410  315529 ..  315554 -  -6.7  -3.28785   GCGCAAAATAGCGAA         GCCGGGGTGCGC ATG GCGG-CCCTGGC         CCACGAGCCGTTCGT  54 358
LOY45_RS01400  313537 ..  313595 - -24.9  -3.05539   GATTAACTAAAGAAT GCATCGCGGGGCAAGCCCGCTCCTACA CTGAACC TGTGGGAGCGGGCTTGCCCCGCGAT-- TTGCATTTCAGGCCT 100 33
LOY45_RS01345  296201 ..  296224 - -13.8   -4.4078   GCGTTGTAACCAAAA          GCCCCGGCTC GCGA GAGTCGGGGC           TTTTTTGTGGGGGAT  95 164
LOY45_RS01325  291137 ..  291147 -  -3.2  -2.61004   GCAGGTGGAAAAACT                 GGAC ATT ATCC                 GTTGCCGGGGCGAGG  40 177
        argS NONE
LOY45_RS01315  288607 ..  288646 - -20.8  -2.72144   CCAGCGGCGTTAAAG  CCTGAGGCCTTGTCGCAG CGCT CTGCGACAAGGCCTTGGG   GCGGGGTTACTGGCG 100 32
LOY45_RS01305  287274 ..  287291 - -14.1  -2.89564   TGGTCAGCCCAGATA             GCGCCCG TGAG CGGGCGC              CGGGGCGATTCTAGC  80 36
LOY45_RS01295 NONE
        proC NONE
LOY45_RS01285  283985 ..  284043 - -37.2  -2.93975   AGGCTTGAAAAACAT CGCTGGCAAGCCAGCTCCCAC-AGGTT GTTGAG AACCTTGTGGGAGCTGGCTTGCCAGCG ATAGGGGCGCTGCGG 100 48
LOY45_RS01280 NONE
        metW  282101 ..  282113 -  -5.5  -2.80901   AAACAGCTCAACAAG                CGACC CAT GATCG                TTCTCCTCCGGTGTG  47 45
LOY45_RS01270 NONE
        rdgB NONE
        hemW NONE
LOY45_RS01255  279400 ..  279423 -  -6.6  -3.54638   AGAAGCTGGCGTAAA          CCTTGCGGTC GATC GCCGGCAAGG           CCGGCTCCCACAGGT  60 139
        mtgA  276312 ..  276367 - -23.7  -3.18264   GCGGTTACCCAGTAA TCAGCCAATAAAAAACCCGGCAAAG TGTGCG CTTTGCCGGGTTTTTTATTGGCTCC AGGGCGCCCGGCGCG 100 15
LOY45_RS01200 NONE
LOY45_RS01195 NONE
        rsmD  267794 ..  267830 -  -5.8   -4.3739   TATCTCGGCAGAAAA    GCGCAACGGTTGTC TTGAAGTGT AACGCCCGTTGCGC    CTTCCTGCTGTGAAT  72 40
LOY45_RS01185  266667 ..  266679 -  -6.2  -3.18264   CCGGCGACTGAGTAA                GCCC TTGTT GGGC                TGCAATGCAGCCTTT  52 117
LOY45_RS01170  263527 ..  263541 -  -2.8  -3.05384   TGGTTTTTCAGCGAA               TGAACA GTT TGTACA               CCAGCTTCAGCAGCG  43 3
LOY45_RS01165  262965 ..  262981 -  -3.5  -2.78596   TATGGGGGGATCAGA              CCTTGGG TGG CCCCGGG              TAGCCGCAATGGGCC  43 4
LOY45_RS01160  261272 ..  261297 -  -5.3  -3.16683   ATGGTATCGCAGCAA         TG-GCGGTCGGC CAA GTCGCCCGCGCA         CGCTGAAGGCACTAT  50 62
        coaD  260674 ..  260700 -  -3.8  -4.14739   CCAGGCATTTGAAAA        CCAATG-GGCA TAATTG TGCCGCATTAG         CGCCCGCAGTGCACG  60 67
LOY45_RS01150  260377 ..  260394 -  -4.1  -3.14344   GAGTCGGGCGACGAA             CGGCA TCAGGCCT TGCCG              GTGATTCGGCGGTAT  46 13
         ggt  258689 ..  258712 -  -5.2  -3.23274   GCTGCCAGAAGTGAA          GGTGTTTAGC GCGG GCTGAGCACC           TGCGCGGCGCCCACG  52 7
LOY45_RS01130  255616 ..  255634 - -11.7  -5.47218   TTGCAGGCAAAAAAA             TCCCGGC ACCTG GCCGGGA             TTTTTTATTGCACCA 100 45
        ilvD  250202 ..  250221 -  -4.2  -3.52539   CAAGTTCAACCAGAA            CCTGTCGGC GAC GCTGAC-GG            CCAACAACCTGTTTG  51 207
LOY45_RS01090  243431 ..  243487 - -25.3  -4.14013   GAAAAGGCCTGAAAA GCAACGCCGGCTCCCACAGTGTCTG GCATATG CACTAACTGTGGGAGCCGGCGTTGC CGGCGATGAGGCCCT 100 58
LOY45_RS01080 NONE
LOY45_RS01075  240102 ..  240117 -  -5.4  -3.55071   CGATAGCGCCCTAAA              GCTCTA GCAG CAGAGC               ATCGATCTGCTCCTG  56 5
        cadR  230245 ..  230280 -  -8.2  -3.35371   GACATGCTCAACGAA    CAGCTCAAGCGCGAGCC GCT GGCA-GCGCCGAAGCTG    GTGATCAATGATCGC  60 274
LOY45_RS01015  226518 ..  226537 -  -5.7  -3.29144   CCAGGCCCTGCAGAA            CGTGGTGC GCGAT GC-CCACG            CCGAAGGCAAGCCGG  51 405
LOY45_RS01000  223167 ..  223179 -  -3.3  -3.54459   TTAATGGGCGCCAAA                CCGGT CTG ACGGG                CCTCAGCGCGGCTCA  50 86
        rpiA  220311 ..  220337 - -15.2  -2.52464   TCGCGGGGCAAGCCA         GCTCCCACAAGC AGA ACCTGTGGGAGC         TGGCTTGCCAGCGAT  80 71
        serA  214660 ..  214680 - -14.7  -5.24129   GGCGGGCATAAAAAA            GGGAGGCCA TCA CGGCCTCCC            TTTTTTTGTCGCACG 100 47
LOY45_RS00950  213013 ..  213028 - -11.8  -2.71731   GCGAGGGCGTAACCA              CGGCGC TGCT GCGCCG               CGAAGGGGTGCAGGT  65 165
LOY45_RS00935  210908 ..  210932 -  -9.2  -3.11732   GTCAAACGCATTGAA         GC-GGCGCCGG TCAG CCCGCGCCAGC          CGCTGATCATCCAGG  60 208
LOY45_RS00925  209049 ..  209064 -  -6.8  -3.64755   ACAGATCGCCAACAA              GCACTG GATG CAGCGC               TACAACAACAGCGCG  59 466
LOY45_RS00915  206195 ..  206214 -  -4.9  -5.06414   GTGCTGGAAGAAAAA            CTCGGCG AGGAAG CGCCGAT             TGCGCCGGCAGTGAA  85 317
LOY45_RS00855 NONE
LOY45_RS00850  192667 ..  192694 -  -9.1  -2.71364   CGAGGTGGTCAAGGA        CCATGACAGCC TGAGCG GGCTGGCACGG         GGCGAGACCTTGTTC  56 204
LOY45_RS00815  185314 ..  185326 -  -2.6  -3.14132   GGGCGCGCCGATCAA                CGGC ATCAG GCCA                GGGCAGGGCGCAGCG  42 18
LOY45_RS00810  183685 ..  183704 -  -8.5  -3.03771   GCACACCGCCGAATA            CGCGCGC ACCCTG GCGCGCA             TGCTCGAGCTCGATC  56 515
LOY45_RS00790  179468 ..  179489 - -12.3  -5.79595   CCGGAAAACAAAAAA           GGCCCAGGT ATTC ACCTGAGCC            TTCATCGATATGGCG 100 36
LOY45_RS00785  178428 ..  178438 -  -4.6  -3.31792   GCAGTACGCCGACAA                 CGCC AAC AGCG                 CGCGGGTTGCCGGGG  51 320
LOY45_RS00775  174586 ..  174632 -  -5.1  -3.03243   ATGGATGGCGTAACA GTGGCAGCGCCCTGCTGAACCC CAAA GGATTTAACAGGGCGCAAT-AC GTCAGCTCTTCTGCA  48 27
LOY45_RS00770 NONE
LOY45_RS00765  173626 ..  173643 - -12.7   -4.4874   CGCAAAAACGCAAAA             GCGGCCA ATGA TGGCCGC              TTTGCTTGGAGACTC  95 54
LOY45_RS00760  172926 ..  172944 -  -5.2  -3.73775   GCGACTCGCAGCAAA             GCAGCG GTCGCGG CGCCGC             CGTACTCAATCGTGA  58 138
LOY45_RS00740 NONE
LOY45_RS00735  168882 ..  168899 -  -6.9  -3.56099   GAGAACCTGGGCAAA             CCTGCGA CCAA TCGCTGG              GGCTTCGGCCCACTG  59 463
LOY45_RS00700  161710 ..  161728 -    -3  -3.28712   CGGCCTGGGCGACAA             CAGCCTGA TCT TCGTGCTG             GTGCATTCGGTGCTC  45 427
LOY45_RS00660  137565 ..  137612 - -14.8   -3.6502   TACGGTGCAGGCAAA GTCCGAAGCGCCGCGCCAGCCCC GGG AGGGCTGGCGCAG-GCTGTGGAT CAACTGTTGGAGTGG  90 25
LOY45_RS00655  137076 ..  137107 - -14.4  -3.05384   CTGGCGTTGAGGCAA      GCGGCTGCAGGCCCG CAA CGGGCCTGC-GCCAG      TCAGATCAGGCCGCT  81 26
LOY45_RS00640 NONE
LOY45_RS00635  132700 ..  132724 -  -8.6  -4.23529   ACAGGAAGAGACAAA         TCA-GGGGCGC GAGA GCACCCCTTGA          GGGCAGGGGATGGGT  77 54
LOY45_RS00630 NONE
LOY45_RS00625 NONE
LOY45_RS00620 NONE
LOY45_RS00615  126430 ..  126442 -  -6.2  -3.14132   TCGCTCTTGTAGGAA                CGGG CTTGC CCCG                CCGACCGGGGTTAGC  52 36
LOY45_RS00610 NONE
LOY45_RS00605 NONE
LOY45_RS00600  122193 ..  122226 - -23.3   -3.1247   AGTCGCCAGATGCAA     CAAAGCCAGCGCCCG GAAT CAGGCGCTGGCTTTG      TCCTTCATACAGGTG 100 44
LOY45_RS00595  120850 ..  120874 - -20.1  -3.57971   AGATTCATTCCGAAA          CCCCTGTCTGC CCT GCAGACAGGGG          TTTTGTCTTTCTGGT 100 132
LOY45_RS00550  111128 ..  111158 - -12.5  -2.63252   ATGTCGCAATAACAG       GCCTGGAGCCCGC CAAGC GCGGGCTTCAGGG       AGATTACGGTAAAAT  73 202
LOY45_RS00545 NONE
LOY45_RS00540 NONE
LOY45_RS00535  107974 ..  107998 - -13.6  -4.72272   GCCGGGCATGAAAAA         GCCCCAGC-CG GTAC CGCGCTGGGGC          TATTTGTCACAGCAG 100 51
LOY45_RS00530  106300 ..  106346 -  -8.7   -4.8743   GCCAAAATAAATAAA TCAGTTGTCCGGCCGGTTG-GCA TTG CGCACAACCGGCCGGTT-ACTGT GCAGGTCAGCTGGCG  90 31
LOY45_RS00525  105749 ..  105773 - -12.2  -4.61566   CTTTAAACGACAAAA         CCCGTCAGCAG TCAC CTGC-GACGGG          TTTTGGGGAATTCGA  95 70
LOY45_RS00520  105116 ..  105159 -  -7.2  -3.56568   GAATCAGGCGGCAAA GGCTATCCCAATGCGCTGGT GAGG ACCAGCGCAGAGGGCCCGGC TTAGTTGCACGTTGT  63 68
LOY45_RS00515 NONE
LOY45_RS00510 NONE
LOY45_RS00505  102478 ..  102491 -  -8.1  -3.59087   AAGAGCATGGCGAAA               CCCTG TGAT CAGGG                CAGTTGCAGACCGCC  66 20
LOY45_RS00495  100426 ..  100444 - -11.7  -3.52919   ACGATGTAAGCAGAA             CGCCCCA GGCAA TGGGGCG             CGGCTACGGTTAGGT  75 53
LOY45_RS00490   99595 ..   99610 - -11.8  -5.14965   AGCTGGATGAAAAAA              GGGCCC CGCA GGGCCC               TTTTCAACAGCACCG 100 44
LOY45_RS00485   97713 ..   97733 -  -3.9    -3.137   ATGAACATCAGGCAA            CGCATGG CGAGCTT CCTTGCG            GGAGTTCTTGAGGTG  46 47
LOY45_RS00480   96296 ..   96317 -  -2.9  -4.67011   AAGGTCAGGTAAAAA           CCTTCACAG GATA CTCTGTAGG            AGCGGCCTTGCCCCG  67 49
LOY45_RS00475 NONE
LOY45_RS00470 NONE
LOY45_RS00465 NONE
LOY45_RS00460 NONE
LOY45_RS00455   91281 ..   91293 -  -7.7  -3.74747   TGAAGGTCTATGAAA                CCTTC GTG GAAGG                CGCCAAGGAGGGCTT  65 437
        algB NONE
LOY45_RS00415   82525 ..   82541 -  -6.5  -3.28712   GGTGGCCCGGGATAA              CCTGCAA GCC TTGCGGG              CGGTGGGGCATCAGG  54 394
        yihA   74544 ..   74560 -  -8.7  -3.17714   GCAAATTGGGACGAA              GCGCACT AAA AATGCGC              TGAAAATCGGGGAAA  63 321
LOY45_RS00365   71373 ..   71388 -  -4.6  -4.79223   TGACATGATCAAAAA              TTGCCC ATAC GGGCAC               TTCAGCAGGGAAGTG  74 65
LOY45_RS00360   70077 ..   70097 -  -2.5  -3.54424   GCCTATGGCCTGAAA            CACACCG GGGTGTT CAGCGTG            GCTGCGCAAGTGCAG  47 341
         zur NONE
        znuC NONE
        znuB NONE
LOY45_RS00335   66436 ..   66457 - -11.5  -2.50816   GCTTGAGGCAGGAAC           CGGGTGCCC GCCT GGGCACCCT            TTTTGTTACGGGCGG  67 31
LOY45_RS00325   63042 ..   63055 -  -4.5  -3.96542   GCAAAGAAACTCAAA               GCGTC CATC AACGC                AGTACCTCCATATGA  59 19
LOY45_RS00320   62319 ..   62331 -  -3.4  -3.72695   AGCTTTTTCATCAAA                TCAC TCCTT GTGA                GGGCCGATCCGGCCC  53 72
LOY45_RS00315   61471 ..   61511 -   -14  -2.52543   ATCGCTGGCAAGCCA  GCTCCCACAAGGTCCGGC TTTGC ACCTGAACCTGTGGGAGC  TGGCTTGCCAGCGAT  78 58
LOY45_RS00285   57186 ..   57203 -  -3.3  -3.89614   TTCAACGCCGACAAA             CACTTCG GTTT CGAGGCG              GCCAGCTGGTACTGG  56 101
LOY45_RS00260   51949 ..   51962 -  -5.2  -3.05384   GGGCTCTGCACTGAA               CCGG TGGGAG CCGG                CCTTGCCGGCGATGC  50 54
LOY45_RS00230 NONE
LOY45_RS00225   44330 ..   44382 - -32.9  -4.08945   AGCAGGCGCTGAAAA GCATCGCGGGGCAAGCCCGCTCCTA CAG TGGGAGCGGGCTTGCCCCGCGATAG GGGCCTCAGCCGCGC 100 31
LOY45_RS00215   42762 ..   42774 -  -2.6  -3.00601   CAAAGCATAAGCATA                GCGC CATTC ACGC                CTTTAGGTACGCTGG  41 28
LOY45_RS00210   41876 ..   41894 -  -5.8  -3.61103   GAACCTGATCCTAAA             GGCCAAGG TGC CCGGGGCC             AGCGAAGCGCAGTTT  57 441
LOY45_RS00195   40320 ..   40378 -   -35   -3.1355   CTGATCGATATTGAA TCCATCGCGGGGCAATCCCGCTCCTAC CTGATT GTAGGAGCGGGATTGCCCCGCGATAG- GGCCCTCAGCCGCCC 100 31
LOY45_RS00180   39186 ..   39207 -  -6.6  -3.54424   GGGGATTTTGTGAAA           CACA-GGCC GCGCT GGCCCTGTG           GGTGCCGCGACGCGC  57 104
        trpB NONE
        trpA   36179 ..   36229 - -15.5  -2.52543   ATCGCTGGCAAGCCA GCTCCCACAGGTACCGGAGTGATC CGAA GATCGCCGCTGT-CCTGTGGGAGC CGGCTTGCCGGCGAT  81 53
LOY45_RS00155 NONE
LOY45_RS00150   33456 ..   33478 -  -6.9  -3.14132   CCGGTGCTGGATGAA          CTGCGCCGCC AGCT GGCG-CGCGG           CTAATCTTTGAAGCG  54 26
LOY45_RS00135   30058 ..   30088 -  -6.1  -3.81146   CCTTGGAACGAAGAA      GCG-GTGGATCGCC TGCT GGCGATCAAGTCGC       GTTCGGTCGACAAGG  60 506
         def   28025 ..   28042 - -11.3  -5.61881   GCTTAAAAAGAAAAA             GGCTTGC CGGA GCAAGCC              TTTGGGAAGAGGAGA 100 41
         fmt NONE
        rsmB NONE
        trkA NONE
LOY45_RS00100   23968 ..   24014 -  -6.8  -3.65902   CCTATCGCAGGCAAA GCCAGCTCCCACAGGATCGA GTTCGGCCA TCAAT--TGTGGGAGCCGGC GTTGCCGGCGATGGA  60 54
        glyQ NONE
        glyS NONE
        gmhB   18830 ..   18852 -  -6.9  -4.25104   GCCCGCCTAGTAAAA           GTGCGCCTG TTTTG CAGACGCGC           TAGTTGTGGATAAGT  71 25
LOY45_RS00070   17868 ..   17883 - -11.8  -5.28176   TGCAGGCACAAAAAA              CCGGCG TAAG CGCCGG               TTTTTTTATGCCGCG 100 162
LOY45_RS00055   12983 ..   13009 -   -18  -3.06915   ACGCATGCTACTCAA         GGCTCGCCGGGA GCT TCGCGGCGAGCC         GCCATTGGGCCAGCG  89 466
LOY45_RS00035    8738 ..    8761 -  -3.1  -3.79419   CTGTGGCAGAAAAGA          CAGAGCG GAACGTCAGG CGCCCTG           GCACCTGGTTACCGA  53 132
LOY45_RS00030 NONE
LOY45_RS00025    6241 ..    6256 - -11.8   -3.2819   ATGCAACATCATCAA              GCCCGC TCAC GCGGGC               TTTTTGTTGCGTTGG  77 65
